mm10_v2_chr18_+_60963517_60963603	1.00277	Nkx3-1	ENSMUST00000115295.2|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000039904.6|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chrX_+_100625737_100625737	0.913944	Nkx3-1	ENSMUST00000048962.3|Kif4|ENSMUSG00000034311.3|kinesin family member 4
mm10_v2_chr19_+_20601958_20601974	0.877082	Nkx3-1	ENSMUST00000087638.3|Aldh1a1|ENSMUSG00000053279.6|aldehyde dehydrogenase family 1, subfamily A1
mm10_v2_chr9_-_124493793_124493793	0.823042	Nkx3-1	ENSMUST00000178787.1|Gm21836|ENSMUSG00000096734.1|predicted gene, 21836
mm10_v2_chr9_+_78191966_78191999	0.563184	Nkx3-1	ENSMUST00000034903.5|Gsta4|ENSMUSG00000032348.5|glutathione S-transferase, alpha 4
mm10_v2_chr5_-_8422582_8422693	0.53371	Nkx3-1	ENSMUST00000168500.1|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae) 	ENSMUST00000002368.9|Dbf4|ENSMUSG00000002297.9|DBF4 homolog (S. cerevisiae)
mm10_v2_chr1_-_133907053_133907172	0.521262	Nkx3-1	ENSMUST00000149380.1|Optc|ENSMUSG00000010311.9|opticin 	ENSMUST00000124051.2|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr15_-_75048837_75048837	0.488106	Nkx3-1	ENSMUST00000179762.1|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1 	ENSMUST00000065408.9|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1
mm10_v2_chr8_+_114133557_114133597	0.482245	Nkx3-1	ENSMUST00000073521.5|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000066514.6|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr10_-_12861735_12861735	0.482043	Nkx3-1	ENSMUST00000076817.4|Utrn|ENSMUSG00000019820.9|utrophin
mm10_v2_chr3_+_30792876_30792876	0.477324	Nkx3-1	ENSMUST00000029256.7|Sec62|ENSMUSG00000027706.7|SEC62 homolog (S. cerevisiae)
mm10_v2_chr9_+_72438534_72438578	0.473609	Nkx3-1	ENSMUST00000034746.8|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr18_-_6241486_6241550	0.469262	Nkx3-1	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr9_+_72438519_72438533	0.457518	Nkx3-1	ENSMUST00000184604.1|Mns1|ENSMUSG00000032221.8|meiosis-specific nuclear structural protein 1
mm10_v2_chr10_+_94514825_94514922	0.445331	Nkx3-1	ENSMUST00000065060.5|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr6_+_128362919_128363058	0.438397	Nkx3-1	ENSMUST00000073316.6|Foxm1|ENSMUSG00000001517.8|forkhead box M1
mm10_v2_chr5_-_21785115_21785251	0.409112	Nkx3-1	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chr4_+_32623985_32624084	0.399984	Nkx3-1	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr2_+_23068168_23068241	0.375885	Nkx3-1	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr8_+_114133635_114133662	0.365386	Nkx3-1	ENSMUST00000147605.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000134593.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr1_-_174921813_174921827	0.362466	Nkx3-1	ENSMUST00000055294.3|Grem2|ENSMUSG00000050069.3|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm10_v2_chr11_-_21370452_21370485	0.35748	Nkx3-1	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chr7_+_139214661_139214681	0.354404	Nkx3-1	ENSMUST00000135509.1|Lrrc27|ENSMUSG00000015980.8|leucine rich repeat containing 27
mm10_v2_chr1_-_133906973_133907014	0.347962	Nkx3-1	ENSMUST00000126123.1|Optc|ENSMUSG00000010311.9|opticin
mm10_v2_chr13_-_99900645_99900683	0.338537	Nkx3-1	ENSMUST00000022150.6|Cartpt|ENSMUSG00000021647.6|CART prepropeptide
mm10_v2_chr9_-_20976762_20976793	0.316475	Nkx3-1	ENSMUST00000054197.5|S1pr2|ENSMUSG00000043895.5|sphingosine-1-phosphate receptor 2
mm10_v2_chr1_+_167598450_167598480	0.312538	Nkx3-1	ENSMUST00000111386.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma 	ENSMUST00000111384.1|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr1_+_66364623_66364663	0.307717	Nkx3-1	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chrX_+_56454871_56454887	0.30626	Nkx3-1	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr5_-_149051300_149051390	0.297499	Nkx3-1	ENSMUST00000110505.1|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr11_-_17008647_17008702	0.29543	Nkx3-1	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr10_+_90576708_90576766	0.284164	Nkx3-1	ENSMUST00000182430.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182960.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182045.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182083.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr1_-_53297001_53297023	0.277838	Nkx3-1	ENSMUST00000126590.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000126412.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000135246.1|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae) 	ENSMUST00000027267.7|Pms1|ENSMUSG00000026098.7|postmeiotic segregation increased 1 (S. cerevisiae)
mm10_v2_chr7_+_123123870_123123901	0.276436	Nkx3-1	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr4_-_140774196_140774236	0.27176	Nkx3-1	ENSMUST00000026381.6|Padi4|ENSMUSG00000025330.6|peptidyl arginine deiminase, type IV
mm10_v2_chr5_+_72914264_72914304	0.264495	Nkx3-1	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr13_-_74482943_74482943	0.259661	Nkx3-1	ENSMUST00000074369.6|Zfp825|ENSMUSG00000069208.5|zinc finger protein 825
mm10_v2_chrX_-_75875101_75875182	0.254286	Nkx3-1	ENSMUST00000114059.3|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr15_-_74997634_74997634	0.24934	Nkx3-1	ENSMUST00000023248.6|Ly6a|ENSMUSG00000075602.4|lymphocyte antigen 6 complex, locus A
mm10_v2_chrX_-_75874536_75874590	0.246621	Nkx3-1	ENSMUST00000033547.7|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr17_-_21933022_21933022	0.244392	Nkx3-1	ENSMUST00000074295.7|Zfp942|ENSMUSG00000071267.5|zinc finger protein 942
mm10_v2_chrX_+_164269371_164269522	0.237691	Nkx3-1	ENSMUST00000145412.1|Pir|ENSMUSG00000031379.7|pirin 	ENSMUST00000033749.7|Pir|ENSMUSG00000031379.7|pirin
mm10_v2_chr2_-_84775388_84775411	0.23656	Nkx3-1	ENSMUST00000023994.3|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr10_+_4432467_4432661	0.234099	Nkx3-1	ENSMUST00000095893.4|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000118544.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene 	ENSMUST00000117489.1|1700052N19Rik|ENSMUSG00000061759.9|RIKEN cDNA 1700052N19 gene
mm10_v2_chr14_-_46831984_46832057	0.232565	Nkx3-1	ENSMUST00000181311.1|Gm10101|ENSMUSG00000061510.3|predicted gene 10101 	ENSMUST00000074862.2|Gm10101|ENSMUSG00000061510.3|predicted gene 10101
mm10_v2_chr4_+_116708571_116708609	0.226118	Nkx3-1	ENSMUST00000106462.2|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000138305.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000125671.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163 	ENSMUST00000130828.1|Ccdc163|ENSMUSG00000028689.8|coiled-coil domain containing 163
mm10_v2_chr10_-_62486575_62486604	0.225285	Nkx3-1	ENSMUST00000092473.3|Vps26a|ENSMUSG00000020078.9|vacuolar protein sorting 26 homolog A (yeast)
mm10_v2_chr15_-_75111684_75111684	0.214848	Nkx3-1	ENSMUST00000100542.3|Ly6c2|ENSMUSG00000022584.8|lymphocyte antigen 6 complex, locus C2
mm10_v2_chr10_-_13324160_13324242	0.206074	Nkx3-1	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr14_+_47663756_47663756	0.204397	Nkx3-1	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr5_-_72559599_72559691	0.201849	Nkx3-1	ENSMUST00000074948.4|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1 	ENSMUST00000087216.5|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1
mm10_v2_chr9_-_43116514_43116572	0.200388	Nkx3-1	ENSMUST00000061833.4|Tmem136|ENSMUSG00000048503.6|transmembrane protein 136
mm10_v2_chr2_+_23069210_23069327	0.196337	Nkx3-1	ENSMUST00000155602.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr10_+_90576777_90576815	0.192551	Nkx3-1	ENSMUST00000183136.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182595.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr2_-_84775420_84775444	0.188065	Nkx3-1	ENSMUST00000111641.1|Serping1|ENSMUSG00000023224.6|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm10_v2_chr19_+_5406815_5406880	0.182667	Nkx3-1	ENSMUST00000174412.1|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene 	ENSMUST00000153017.2|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene
mm10_v2_chr16_+_36934976_36935013	0.181691	Nkx3-1	ENSMUST00000023531.8|Hcls1|ENSMUSG00000022831.8|hematopoietic cell specific Lyn substrate 1
mm10_v2_chr4_+_62619515_62619582	0.178927	Nkx3-1	ENSMUST00000084521.4|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3 	ENSMUST00000107424.1|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3
mm10_v2_chr5_+_90367204_90367204	0.178889	Nkx3-1	ENSMUST00000068250.3|Gm9958|ENSMUSG00000054945.3|predicted gene 9958
mm10_v2_chr18_-_12862624_12862714	0.176064	Nkx3-1	ENSMUST00000121808.1|Osbpl1a|ENSMUSG00000044252.11|oxysterol binding protein-like 1A 	ENSMUST00000118313.1|Osbpl1a|ENSMUSG00000044252.11|oxysterol binding protein-like 1A
mm10_v2_chr5_+_8422831_8422906	0.167853	Nkx3-1	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr17_-_15564322_15564359	0.167188	Nkx3-1	ENSMUST00000147532.1|Prdm9|ENSMUSG00000051977.8|PR domain containing 9
mm10_v2_chr10_+_90576570_90576668	0.165575	Nkx3-1	ENSMUST00000182786.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182600.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr4_+_3940747_3940854	0.157723	Nkx3-1	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr13_+_23571382_23571396	0.155406	Nkx3-1	ENSMUST00000079251.5|Hist1h2bg|ENSMUSG00000058385.6|histone cluster 1, H2bg
mm10_v2_chr9_-_35570393_35570402	0.153059	Nkx3-1	ENSMUST00000115110.4|Hyls1|ENSMUSG00000050555.9|hydrolethalus syndrome 1
mm10_v2_chr3_-_127409044_127409064	0.152458	Nkx3-1	ENSMUST00000182704.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr9_-_62537036_62537061	0.148437	Nkx3-1	ENSMUST00000048043.5|Coro2b|ENSMUSG00000041729.9|coronin, actin binding protein, 2B
mm10_v2_chr1_+_167598384_167598411	0.147252	Nkx3-1	ENSMUST00000015987.3|Rxrg|ENSMUSG00000015843.4|retinoid X receptor gamma
mm10_v2_chr5_-_110046486_110046486	0.1418	Nkx3-1	ENSMUST00000167969.1|Gm17655|ENSMUSG00000090963.1|predicted gene, 17655
mm10_v2_chr5_-_69592274_69592308	0.140947	Nkx3-1	ENSMUST00000174233.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000120789.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2 	ENSMUST00000166298.1|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2
mm10_v2_chr7_-_44257378_44257378	0.140309	Nkx3-1	ENSMUST00000107945.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular 	ENSMUST00000118216.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular
mm10_v2_chr8_-_123318553_123318579	0.137836	Nkx3-1	ENSMUST00000118395.1|Fanca|ENSMUSG00000032815.9|Fanconi anemia, complementation group A 	ENSMUST00000035495.8|Fanca|ENSMUSG00000032815.9|Fanconi anemia, complementation group A
mm10_v2_chr12_+_76324860_76324898	0.13751	Nkx3-1	ENSMUST00000095610.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5 	ENSMUST00000154078.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr17_-_25727364_25727426	0.134157	Nkx3-1	ENSMUST00000170070.1|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18 	ENSMUST00000048054.7|Chtf18|ENSMUSG00000019214.7|CTF18, chromosome transmission fidelity factor 18
mm10_v2_chr14_+_79515618_79515694	0.133353	Nkx3-1	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr10_-_115185015_115185029	0.132041	Nkx3-1	ENSMUST00000006949.8|Tph2|ENSMUSG00000006764.8|tryptophan hydroxylase 2
mm10_v2_chr9_+_74976096_74976177	0.130015	Nkx3-1	ENSMUST00000081746.5|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chrX_+_163911401_163911439	0.130014	Nkx3-1	ENSMUST00000140845.1|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr19_-_59943000_59943100	0.12713	Nkx3-1	ENSMUST00000170819.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr1_-_175688353_175688353	0.126911	Nkx3-1	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr4_-_45530330_45530330	0.117054	Nkx3-1	ENSMUST00000061986.5|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr8_-_41041828_41041866	0.115747	Nkx3-1	ENSMUST00000051379.7|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr18_-_6241470_6241482	0.113185	Nkx3-1	ENSMUST00000163210.1|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr10_+_90576678_90576691	0.111965	Nkx3-1	ENSMUST00000182284.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr7_+_58658181_58658294	0.10761	Nkx3-1	ENSMUST00000168747.1|Atp10a|ENSMUSG00000025324.7|ATPase, class V, type 10A
mm10_v2_chr17_+_37270214_37270249	0.107543	Nkx3-1	ENSMUST00000038580.6|H2-M3|ENSMUSG00000016206.6|histocompatibility 2, M region locus 3
mm10_v2_chr4_+_33310306_33310387	0.102615	Nkx3-1	ENSMUST00000108153.2|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase 	ENSMUST00000029942.7|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase
mm10_v2_chrX_+_7579666_7579693	0.101192	Nkx3-1	ENSMUST00000115740.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3 	ENSMUST00000115739.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3
mm10_v2_chr7_+_43607169_43607225	0.0994176	Nkx3-1	ENSMUST00000120935.1|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819 	ENSMUST00000127765.1|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819 	ENSMUST00000032661.7|Zfp819|ENSMUSG00000055102.9|zinc finger protein 819
mm10_v2_chr14_-_55788810_55788857	0.0984746	Nkx3-1	ENSMUST00000022830.6|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3 	ENSMUST00000168716.1|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3 	ENSMUST00000178399.1|Ripk3|ENSMUSG00000022221.7|receptor-interacting serine-threonine kinase 3
mm10_v2_chr12_-_100899436_100899524	0.0969509	Nkx3-1	ENSMUST00000053668.3|Gpr68|ENSMUSG00000047415.5|G protein-coupled receptor 68
mm10_v2_chr18_+_82910863_82910885	0.0936185	Nkx3-1	ENSMUST00000171238.1|Zfp516|ENSMUSG00000058881.6|zinc finger protein 516
mm10_v2_chr3_-_127408986_127409008	0.0933478	Nkx3-1	ENSMUST00000182588.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182959.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182452.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr13_+_80886095_80886201	0.0887966	Nkx3-1	ENSMUST00000161441.1|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr1_-_162478004_162478034	0.0875189	Nkx3-1	ENSMUST00000086074.5|Dnm3|ENSMUSG00000040265.10|dynamin 3 	ENSMUST00000070330.7|Dnm3|ENSMUSG00000040265.10|dynamin 3
mm10_v2_chr4_+_110397661_110397708	0.0810196	Nkx3-1	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr17_-_79715034_79715047	0.0796124	Nkx3-1	ENSMUST00000024894.1|Cyp1b1|ENSMUSG00000024087.3|cytochrome P450, family 1, subfamily b, polypeptide 1
mm10_v2_chr12_+_52516077_52516077	0.0781131	Nkx3-1	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr2_+_132846638_132846708	0.0726818	Nkx3-1	ENSMUST00000028835.6|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1 	ENSMUST00000110122.3|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1
mm10_v2_chr19_+_11469353_11469381	0.0696156	Nkx3-1	ENSMUST00000165310.1|Ms4a6c|ENSMUSG00000079419.3|membrane-spanning 4-domains, subfamily A, member 6C
mm10_v2_chr11_+_101279092_101279111	0.0693916	Nkx3-1	ENSMUST00000103107.4|Cntd1|ENSMUSG00000078653.4|cyclin N-terminal domain containing 1
mm10_v2_chr17_-_56982120_56982161	0.0660249	Nkx3-1	ENSMUST00000056113.4|Acer1|ENSMUSG00000045019.4|alkaline ceramidase 1
mm10_v2_chr17_+_56304313_56304407	0.0658674	Nkx3-1	ENSMUST00000113035.1|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1 	ENSMUST00000113039.2|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1 	ENSMUST00000142387.1|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1
mm10_v2_chr7_-_35318408_35318440	0.0634827	Nkx3-1	ENSMUST00000079693.5|Gpatch1|ENSMUSG00000063808.8|G patch domain containing 1
mm10_v2_chrX_-_100625901_100625954	0.059475	Nkx3-1	ENSMUST00000059099.6|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr10_+_90576252_90576517	0.0568635	Nkx3-1	ENSMUST00000182427.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182053.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182113.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr3_-_20242173_20242187	0.0544152	Nkx3-1	ENSMUST00000001921.1|Cpa3|ENSMUSG00000001865.1|carboxypeptidase A3, mast cell
mm10_v2_chr2_+_110597298_110597316	0.0539953	Nkx3-1	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr12_+_76324905_76324932	0.0537393	Nkx3-1	ENSMUST00000172992.1|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr17_-_65772686_65772752	0.0537018	Nkx3-1	ENSMUST00000070673.7|Rab31|ENSMUSG00000056515.8|RAB31, member RAS oncogene family
mm10_v2_chr1_+_135133272_135133336	0.0511779	Nkx3-1	ENSMUST00000167080.1|Ptpn7|ENSMUSG00000031506.5|protein tyrosine phosphatase, non-receptor type 7
mm10_v2_chr1_-_156034800_156034817	0.0461661	Nkx3-1	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr7_+_75455534_75455629	0.0452915	Nkx3-1	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr10_-_13324250_13324318	0.0437979	Nkx3-1	ENSMUST00000105543.1|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr4_+_134397380_134397471	0.0429408	Nkx3-1	ENSMUST00000105870.1|Pafah2|ENSMUSG00000037366.8|platelet-activating factor acetylhydrolase 2
mm10_v2_chr12_-_54695829_54695884	0.0428479	Nkx3-1	ENSMUST00000162106.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000160085.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000161592.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000163433.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr10_-_4432312_4432388	0.0414047	Nkx3-1	ENSMUST00000126102.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000131853.1|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae) 	ENSMUST00000042251.4|Rmnd1|ENSMUSG00000019763.5|required for meiotic nuclear division 1 homolog (S. cerevisiae)
mm10_v2_chr9_-_112187766_112187862	0.0405887	Nkx3-1	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr2_-_153015331_153015427	0.0395473	Nkx3-1	ENSMUST00000028972.8|Pdrg1|ENSMUSG00000027472.8|p53 and DNA damage regulated 1
mm10_v2_chr14_-_104522615_104522707	0.0388664	Nkx3-1	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr10_-_62814539_62814540	0.0381941	Nkx3-1	ENSMUST00000173087.1|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1 	ENSMUST00000174121.1|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr12_-_54695813_54695828	0.0329935	Nkx3-1	ENSMUST00000110713.3|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr9_+_78051938_78051958	0.03114	Nkx3-1	ENSMUST00000024104.7|Gcm1|ENSMUSG00000023333.7|glial cells missing homolog 1 (Drosophila)
mm10_v2_chr9_+_89199319_89199379	0.0294962	Nkx3-1	ENSMUST00000138109.1|Mthfs|ENSMUSG00000066442.10|5, 10-methenyltetrahydrofolate synthetase
mm10_v2_chr4_+_110397764_110397808	0.02932	Nkx3-1	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chrX_-_101222426_101222563	0.0255301	Nkx3-1	ENSMUST00000120389.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000156473.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000077876.3|Snx12|ENSMUSG00000046032.10|sorting nexin 12
mm10_v2_chr9_+_105053239_105053259	0.0212995	Nkx3-1	ENSMUST00000035177.8|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3 	ENSMUST00000149243.1|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3
mm10_v2_chrX_+_56317608_56317666	0.0203893	Nkx3-1	ENSMUST00000151426.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene 	ENSMUST00000138262.1|1600025M17Rik|ENSMUSG00000085114.1|RIKEN cDNA 1600025M17 gene
mm10_v2_chrY_+_17874741_17874741	0.0202009	Nkx3-1	ENSMUST00000177639.1|Gm20831|ENSMUSG00000094325.1|predicted gene, 20831
mm10_v2_chr19_+_43689672_43689695	0.0156874	Nkx3-1	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr3_-_57575760_57575836	0.0153547	Nkx3-1	ENSMUST00000029380.7|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr2_+_62664279_62664300	0.0129726	Nkx3-1	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr2_+_163994960_163994960	0.0116179	Nkx3-1	ENSMUST00000018470.3|Ywhab|ENSMUSG00000018326.3|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm10_v2_chr12_-_102758672_102758672	0.00774991	Nkx3-1	ENSMUST00000174651.1|Gm20604|ENSMUSG00000041716.7|predicted gene 20604
mm10_v2_chr9_-_89092835_89092835	0.00755574	Nkx3-1	ENSMUST00000167113.1|Trim43b|ENSMUSG00000079162.2|tripartite motif-containing 43B
mm10_v2_chr1_-_75046639_75046639	0.00629022	Nkx3-1	ENSMUST00000152855.1|Nhej1|ENSMUSG00000026162.6|nonhomologous end-joining factor 1
mm10_v2_chr6_-_99632376_99632376	0.00604942	Nkx3-1	ENSMUST00000176255.1|Gm20696|ENSMUSG00000030068.3|predicted gene 20696
mm10_v2_chr11_+_69098937_69098985	0.00525469	Nkx3-1	ENSMUST00000021271.7|Per1|ENSMUSG00000020893.11|period circadian clock 1
mm10_v2_chr6_-_69284319_69284319	0.00446979	Nkx3-1	ENSMUST00000103349.1|Igkv4-69|ENSMUSG00000076548.1|immunoglobulin kappa variable 4-69
mm10_v2_chr17_-_47692466_47692466	0.00323282	Nkx3-1	ENSMUST00000113300.1|Prickle4|ENSMUSG00000096549.3|prickle homolog 4 (Drosophila)
mm10_v2_chr18_-_42262053_42262140	0.00212949	Nkx3-1	ENSMUST00000097590.3|Lars|ENSMUSG00000024493.8|leucyl-tRNA synthetase
mm10_v2_chr17_+_84956718_84956745	0.00212944	Nkx3-1	ENSMUST00000112305.3|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform
mm10_v2_chr5_+_138161071_138161116	0.00166943	Nkx3-1	ENSMUST00000019638.8|Cops6|ENSMUSG00000019494.8|COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana) 	ENSMUST00000110951.1|Cops6|ENSMUSG00000019494.8|COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana)
mm10_v2_chr1_+_16665189_16665264	0.00130442	Nkx3-1	ENSMUST00000177501.1|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70 	ENSMUST00000065373.5|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70
mm10_v2_chr9_-_122310921_122310936	0.00114865	Nkx3-1	ENSMUST00000180685.1|Gm26797|ENSMUSG00000097572.1|predicted gene, 26797
