mm10_v2_chr3_-_80802789_80802840	2.85716	Nkx3-2	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr10_+_38965515_38965558	2.05501	Nkx3-2	ENSMUST00000019992.5|Lama4|ENSMUSG00000019846.5|laminin, alpha 4
mm10_v2_chr15_-_88978958_88979007	2.01589	Nkx3-2	ENSMUST00000042594.6|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) 	ENSMUST00000109368.1|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm10_v2_chr9_-_58313189_58313212	1.94616	Nkx3-2	ENSMUST00000061799.8|Loxl1|ENSMUSG00000032334.9|lysyl oxidase-like 1
mm10_v2_chr16_+_41532851_41532865	1.82742	Nkx3-2	ENSMUST00000078873.4|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr9_+_57940104_57940120	1.4552	Nkx3-2	ENSMUST00000043059.7|Sema7a|ENSMUSG00000038264.7|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm10_v2_chr6_-_125494754_125494791	1.37489	Nkx3-2	ENSMUST00000032492.8|Cd9|ENSMUSG00000030342.8|CD9 antigen
mm10_v2_chr15_-_66969616_66969647	1.33322	Nkx3-2	ENSMUST00000170903.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000166420.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000005256.6|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000164070.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1
mm10_v2_chr11_+_3332426_3332460	1.2971	Nkx3-2	ENSMUST00000136474.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr2_+_25054396_25054468	1.25444	Nkx3-2	ENSMUST00000102931.4|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000074422.7|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000132172.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000114388.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000114386.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor
mm10_v2_chr6_-_138421379_138421452	1.19848	Nkx3-2	ENSMUST00000163065.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr5_-_139130159_139130181	1.1778	Nkx3-2	ENSMUST00000129851.1|Prkar1b|ENSMUSG00000025855.7|protein kinase, cAMP dependent regulatory, type I beta
mm10_v2_chr3_+_86070915_86070915	1.16074	Nkx3-2	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr8_+_104101625_104101650	1.13199	Nkx3-2	ENSMUST00000034339.8|Cdh5|ENSMUSG00000031871.8|cadherin 5
mm10_v2_chr8_+_104340594_104340622	1.11119	Nkx3-2	ENSMUST00000034343.4|Cmtm3|ENSMUSG00000031875.6|CKLF-like MARVEL transmembrane domain containing 3
mm10_v2_chr1_+_172341197_172341217	1.10352	Nkx3-2	ENSMUST00000056136.3|Kcnj10|ENSMUSG00000044708.5|potassium inwardly-rectifying channel, subfamily J, member 10
mm10_v2_chr14_+_80000292_80000309	1.09559	Nkx3-2	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr8_-_13200576_13200636	1.0134	Nkx3-2	ENSMUST00000165605.2|Grtp1|ENSMUSG00000038515.9|GH regulated TBC protein 1
mm10_v2_chr6_+_117168535_117168584	0.999684	Nkx3-2	ENSMUST00000112866.1|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12 	ENSMUST00000112871.1|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12 	ENSMUST00000073043.4|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12
mm10_v2_chr4_-_4138432_4138480	0.974231	Nkx3-2	ENSMUST00000070375.7|Penk|ENSMUSG00000045573.9|preproenkephalin
mm10_v2_chr6_+_125494419_125494454	0.948472	Nkx3-2	ENSMUST00000181266.1|Gm26728|ENSMUSG00000097114.1|predicted gene, 26728
mm10_v2_chr2_+_25054355_25054391	0.910328	Nkx3-2	ENSMUST00000100334.4|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000152122.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000116574.3|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000006646.8|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor
mm10_v2_chr3_+_89436699_89436734	0.892926	Nkx3-2	ENSMUST00000038942.3|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1 	ENSMUST00000130858.1|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1
mm10_v2_chr4_-_147936713_147936767	0.887687	Nkx3-2	ENSMUST00000105712.1|Plod1|ENSMUSG00000019055.9|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 	ENSMUST00000019199.7|Plod1|ENSMUSG00000019055.9|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
mm10_v2_chr2_-_156992021_156992119	0.879579	Nkx3-2	ENSMUST00000109558.1|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3 	ENSMUST00000069600.6|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3 	ENSMUST00000072298.6|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3
mm10_v2_chr2_+_3713478_3713500	0.861442	Nkx3-2	ENSMUST00000115053.2|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr4_+_102421518_102421573	0.86039	Nkx3-2	ENSMUST00000106904.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr3_-_82074639_82074716	0.846938	Nkx3-2	ENSMUST00000029635.8|Gucy1b3|ENSMUSG00000028005.8|guanylate cyclase 1, soluble, beta 3
mm10_v2_chr4_-_108032069_108032098	0.844411	Nkx3-2	ENSMUST00000106709.2|Podn|ENSMUSG00000028600.9|podocan
mm10_v2_chr7_+_18987518_18987524	0.844336	Nkx3-2	ENSMUST00000063563.7|Nanos2|ENSMUSG00000051965.7|nanos homolog 2 (Drosophila)
mm10_v2_chr4_-_129121699_129121740	0.821156	Nkx3-2	ENSMUST00000135763.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000149763.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000164649.1|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr15_-_102625061_102625100	0.820299	Nkx3-2	ENSMUST00000184077.1|ATF7|ENSMUSG00000099083.1|Cyclic AMP-dependent transcription factor ATF-7  	ENSMUST00000184906.1|ATF7|ENSMUSG00000099083.1|Cyclic AMP-dependent transcription factor ATF-7  	ENSMUST00000169033.1|ATF7|ENSMUSG00000099083.1|Cyclic AMP-dependent transcription factor ATF-7
mm10_v2_chr4_-_108031938_108031961	0.814759	Nkx3-2	ENSMUST00000106708.1|Podn|ENSMUSG00000028600.9|podocan
mm10_v2_chr9_-_21037775_21037795	0.807015	Nkx3-2	ENSMUST00000180870.1|Gm26592|ENSMUSG00000097535.1|predicted gene, 26592
mm10_v2_chr4_-_40239779_40239831	0.806902	Nkx3-2	ENSMUST00000037907.6|Ddx58|ENSMUSG00000040296.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
mm10_v2_chr3_+_123267445_123267500	0.788846	Nkx3-2	ENSMUST00000047923.7|Sec24d|ENSMUSG00000039234.7|Sec24 related gene family, member D (S. cerevisiae)
mm10_v2_chr2_-_104409992_104409993	0.759551	Nkx3-2	ENSMUST00000149466.1|D430041D05Rik|ENSMUSG00000068373.8|RIKEN cDNA D430041D05 gene 	ENSMUST00000139015.1|D430041D05Rik|ENSMUSG00000068373.8|RIKEN cDNA D430041D05 gene
mm10_v2_chr2_-_71546745_71546758	0.745526	Nkx3-2	ENSMUST00000024159.6|Dlx2|ENSMUSG00000023391.7|distal-less homeobox 2
mm10_v2_chr11_+_43474276_43474340	0.740132	Nkx3-2	ENSMUST00000173002.1|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2 	ENSMUST00000057679.3|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2
mm10_v2_chr3_-_57575907_57575912	0.688651	Nkx3-2	ENSMUST00000120977.1|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr19_-_10881723_10881766	0.671249	Nkx3-2	ENSMUST00000144681.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chrX_+_139684980_139685082	0.668687	Nkx3-2	ENSMUST00000096313.3|Tbc1d8b|ENSMUSG00000042473.8|TBC1 domain family, member 8B
mm10_v2_chr7_-_79743034_79743088	0.666525	Nkx3-2	ENSMUST00000032761.7|Pex11a|ENSMUSG00000030545.8|peroxisomal biogenesis factor 11 alpha
mm10_v2_chr6_-_108185552_108185587	0.656751	Nkx3-2	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr6_+_86195214_86195251	0.638142	Nkx3-2	ENSMUST00000032066.9|Tgfa|ENSMUSG00000029999.9|transforming growth factor alpha
mm10_v2_chrX_+_99821021_99821021	0.635806	Nkx3-2	ENSMUST00000096363.2|Tmem28|ENSMUSG00000071719.2|transmembrane protein 28
mm10_v2_chr5_+_143363890_143363919	0.627788	Nkx3-2	ENSMUST00000010969.8|Grid2ip|ENSMUSG00000010825.11|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
mm10_v2_chr3_-_57575760_57575836	0.62218	Nkx3-2	ENSMUST00000029380.7|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr19_-_4121536_4121581	0.620211	Nkx3-2	ENSMUST00000025767.7|Aip|ENSMUSG00000024847.8|aryl-hydrocarbon receptor-interacting protein
mm10_v2_chr15_-_37458523_37458581	0.616609	Nkx3-2	ENSMUST00000116445.2|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr9_-_52679429_52679429	0.61075	Nkx3-2	ENSMUST00000098768.2|AI593442|ENSMUSG00000078307.2|expressed sequence AI593442
mm10_v2_chr8_+_75213944_75213944	0.607904	Nkx3-2	ENSMUST00000139848.1|Rasd2|ENSMUSG00000034472.7|RASD family, member 2
mm10_v2_chr5_-_110839575_110839734	0.601456	Nkx3-2	ENSMUST00000145318.1|Hscb|ENSMUSG00000043510.6|HscB iron-sulfur cluster co-chaperone homolog (E. coli)
mm10_v2_chr15_-_102624922_102624996	0.576593	Nkx3-2	ENSMUST00000183765.1|ATF7|ENSMUSG00000099083.1|Cyclic AMP-dependent transcription factor ATF-7
mm10_v2_chr7_+_5057161_5057197	0.563043	Nkx3-2	ENSMUST00000045543.5|Ccdc106|ENSMUSG00000035228.8|coiled-coil domain containing 106
mm10_v2_chr2_-_130424242_130424293	0.557509	Nkx3-2	ENSMUST00000089581.4|Pced1a|ENSMUSG00000037773.8|PC-esterase domain containing 1A
mm10_v2_chr19_+_55741810_55741842	0.556777	Nkx3-2	ENSMUST00000111657.3|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000061496.9|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000041717.7|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111662.4|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr8_+_45885479_45885494	0.552304	Nkx3-2	ENSMUST00000034053.5|Pdlim3|ENSMUSG00000031636.6|PDZ and LIM domain 3
mm10_v2_chr3_+_89436736_89436761	0.544011	Nkx3-2	ENSMUST00000146630.1|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1 	ENSMUST00000145753.1|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1
mm10_v2_chr11_+_35121126_35121224	0.541133	Nkx3-2	ENSMUST00000069837.3|Slit3|ENSMUSG00000056427.4|slit homolog 3 (Drosophila)
mm10_v2_chr15_-_100584075_100584075	0.536129	Nkx3-2	ENSMUST00000184908.1|POU6F1|ENSMUSG00000098598.1|POU domain, class 6, transcription factor 1 (Pou6f1), mRNA
mm10_v2_chr11_-_98587193_98587368	0.534109	Nkx3-2	ENSMUST00000052919.7|Ormdl3|ENSMUSG00000038150.7|ORM1-like 3 (S. cerevisiae)
mm10_v2_chr7_-_140856254_140856383	0.521029	Nkx3-2	ENSMUST00000026557.8|Bet1l|ENSMUSG00000025484.8|blocked early in transport 1 homolog (S. cerevisiae)-like
mm10_v2_chr4_-_4138817_4138828	0.516766	Nkx3-2	ENSMUST00000133567.1|Penk|ENSMUSG00000045573.9|preproenkephalin
mm10_v2_chr3_-_87768932_87768960	0.513526	Nkx3-2	ENSMUST00000173184.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172621.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000174759.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172590.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000079083.5|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1
mm10_v2_chr11_+_87581041_87581067	0.507213	Nkx3-2	ENSMUST00000018544.5|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000063156.4|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000107960.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr2_+_69670100_69670134	0.506984	Nkx3-2	ENSMUST00000100050.3|Klhl41|ENSMUSG00000075307.3|kelch-like 41
mm10_v2_chr6_+_83034173_83034252	0.506978	Nkx3-2	ENSMUST00000000707.2|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3 	ENSMUST00000101257.3|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3
mm10_v2_chr19_-_10881677_10881717	0.506924	Nkx3-2	ENSMUST00000128835.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr18_+_37447641_37447674	0.502269	Nkx3-2	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr2_+_177904285_177904285	0.493082	Nkx3-2	ENSMUST00000099001.3|Gm14327|ENSMUSG00000074521.3|predicted gene 14327
mm10_v2_chr14_-_88471396_88471396	0.492047	Nkx3-2	ENSMUST00000061628.5|Pcdh20|ENSMUSG00000050505.6|protocadherin 20
mm10_v2_chr13_-_92483996_92484037	0.490869	Nkx3-2	ENSMUST00000040106.7|Fam151b|ENSMUSG00000034334.7|family with sequence similarity 151, member B
mm10_v2_chr5_+_28165690_28165717	0.483578	Nkx3-2	ENSMUST00000036177.7|En2|ENSMUSG00000039095.7|engrailed 2
mm10_v2_chr7_-_126897424_126897483	0.477308	Nkx3-2	ENSMUST00000120007.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr6_-_136171722_136171849	0.472327	Nkx3-2	ENSMUST00000053880.6|Grin2b|ENSMUSG00000030209.8|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm10_v2_chr8_+_85083269_85083297	0.469597	Nkx3-2	ENSMUST00000034121.9|Man2b1|ENSMUSG00000005142.9|mannosidase 2, alpha B1
mm10_v2_chr2_-_130424673_130424728	0.463797	Nkx3-2	ENSMUST00000110277.1|Pced1a|ENSMUSG00000037773.8|PC-esterase domain containing 1A
mm10_v2_chr6_-_72380416_72380483	0.45072	Nkx3-2	ENSMUST00000101285.3|Vamp5|ENSMUSG00000073002.3|vesicle-associated membrane protein 5 	ENSMUST00000074231.3|Vamp5|ENSMUSG00000073002.3|vesicle-associated membrane protein 5
mm10_v2_chr7_+_24587543_24587543	0.448625	Nkx3-2	ENSMUST00000077191.6|Ethe1|ENSMUSG00000064254.6|ethylmalonic encephalopathy 1
mm10_v2_chr9_+_123150941_123151021	0.445545	Nkx3-2	ENSMUST00000026890.4|Clec3b|ENSMUSG00000025784.4|C-type lectin domain family 3, member b
mm10_v2_chr7_-_35556304_35556304	0.435327	Nkx3-2	ENSMUST00000040962.5|Nudt19|ENSMUSG00000034875.5|nudix (nucleoside diphosphate linked moiety X)-type motif 19
mm10_v2_chr4_+_149586432_149586511	0.434201	Nkx3-2	ENSMUST00000105691.1|Clstn1|ENSMUSG00000039953.7|calsyntenin 1
mm10_v2_chr2_-_166581969_166582071	0.429948	Nkx3-2	ENSMUST00000109246.1|Prex1|ENSMUSG00000039621.7|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
mm10_v2_chr9_+_106448629_106448655	0.427452	Nkx3-2	ENSMUST00000048527.7|Abhd14b|ENSMUSG00000042073.8|abhydrolase domain containing 14b
mm10_v2_chr2_+_10153563_10153627	0.425015	Nkx3-2	ENSMUST00000026886.7|Itih5|ENSMUSG00000025780.7|inter-alpha (globulin) inhibitor H5
mm10_v2_chr19_+_46003468_46003547	0.420123	Nkx3-2	ENSMUST00000099393.2|Hps6|ENSMUSG00000074811.2|Hermansky-Pudlak syndrome 6
mm10_v2_chr18_+_65698253_65698277	0.401857	Nkx3-2	ENSMUST00000115097.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like 	ENSMUST00000117694.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like
mm10_v2_chr8_+_83666827_83666882	0.396639	Nkx3-2	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr11_-_32267547_32267707	0.389941	Nkx3-2	ENSMUST00000109389.2|Nprl3|ENSMUSG00000020289.9|nitrogen permease regulator-like 3 	ENSMUST00000129010.1|Nprl3|ENSMUSG00000020289.9|nitrogen permease regulator-like 3 	ENSMUST00000020530.5|Nprl3|ENSMUSG00000020289.9|nitrogen permease regulator-like 3
mm10_v2_chr11_-_109722214_109722289	0.38712	Nkx3-2	ENSMUST00000020938.7|Fam20a|ENSMUSG00000020614.7|family with sequence similarity 20, member A
mm10_v2_chr10_+_81628702_81628719	0.385496	Nkx3-2	ENSMUST00000129622.1|Ankrd24|ENSMUSG00000054708.11|ankyrin repeat domain 24
mm10_v2_chr2_+_79635416_79635441	0.384071	Nkx3-2	ENSMUST00000111788.1|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr2_+_130424321_130424393	0.379609	Nkx3-2	ENSMUST00000128994.1|Vps16|ENSMUSG00000027411.11|vacuolar protein sorting 16 (yeast) 	ENSMUST00000028900.9|Vps16|ENSMUSG00000027411.11|vacuolar protein sorting 16 (yeast)
mm10_v2_chr11_+_70647258_70647294	0.372567	Nkx3-2	ENSMUST00000037534.7|Rnf167|ENSMUSG00000040746.9|ring finger protein 167
mm10_v2_chr10_-_128919259_128919305	0.366879	Nkx3-2	ENSMUST00000149961.1|Rdh5|ENSMUSG00000025350.9|retinol dehydrogenase 5 	ENSMUST00000026406.7|Rdh5|ENSMUSG00000025350.9|retinol dehydrogenase 5
mm10_v2_chr17_+_37046555_37046600	0.365009	Nkx3-2	ENSMUST00000172789.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr3_-_37419566_37419605	0.362904	Nkx3-2	ENSMUST00000138949.1|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000149449.1|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000108117.2|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000108118.2|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000099130.2|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000052645.6|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6
mm10_v2_chr15_-_76307231_76307389	0.362629	Nkx3-2	ENSMUST00000023222.6|Oplah|ENSMUSG00000022562.7|5-oxoprolinase (ATP-hydrolysing) 	ENSMUST00000164189.1|Oplah|ENSMUSG00000022562.7|5-oxoprolinase (ATP-hydrolysing)
mm10_v2_chr11_-_5707658_5707708	0.356212	Nkx3-2	ENSMUST00000154330.1|Mrps24|ENSMUSG00000020477.4|mitochondrial ribosomal protein S24
mm10_v2_chr10_+_43479140_43479194	0.355186	Nkx3-2	ENSMUST00000167488.1|Bend3|ENSMUSG00000038214.8|BEN domain containing 3 	ENSMUST00000040147.7|Bend3|ENSMUSG00000038214.8|BEN domain containing 3
mm10_v2_chr11_-_69795930_69795947	0.35284	Nkx3-2	ENSMUST00000045971.8|Chrnb1|ENSMUSG00000041189.9|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm10_v2_chr10_-_127211528_127211626	0.347316	Nkx3-2	ENSMUST00000013970.7|Pip4k2c|ENSMUSG00000025417.7|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm10_v2_chr17_+_70561739_70561787	0.3455	Nkx3-2	ENSMUST00000097288.2|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr11_+_51763682_51763749	0.345178	Nkx3-2	ENSMUST00000020653.5|Sar1b|ENSMUSG00000020386.5|SAR1 gene homolog B (S. cerevisiae)
mm10_v2_chr11_+_49250583_49250597	0.339429	Nkx3-2	ENSMUST00000129588.1|Mgat1|ENSMUSG00000020346.10|mannoside acetylglucosaminyltransferase 1
mm10_v2_chr2_+_79635352_79635410	0.337857	Nkx3-2	ENSMUST00000111785.2|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr2_-_58567157_58567288	0.336516	Nkx3-2	ENSMUST00000056376.5|Acvr1|ENSMUSG00000026836.9|activin A receptor, type 1
mm10_v2_chr17_+_34031787_34031821	0.334697	Nkx3-2	ENSMUST00000044858.8|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta
mm10_v2_chr11_+_85353156_85353219	0.33435	Nkx3-2	ENSMUST00000108061.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108062.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108056.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000138423.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000074875.4|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000092821.3|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3
mm10_v2_chr16_-_31081363_31081439	0.334321	Nkx3-2	ENSMUST00000055389.7|Xxylt1|ENSMUSG00000047434.7|xyloside xylosyltransferase 1
mm10_v2_chr7_+_97453204_97453303	0.333711	Nkx3-2	ENSMUST00000050732.7|Kctd14|ENSMUSG00000051727.8|potassium channel tetramerisation domain containing 14 	ENSMUST00000121987.1|Kctd14|ENSMUSG00000051727.8|potassium channel tetramerisation domain containing 14
mm10_v2_chr4_-_131838231_131838291	0.332394	Nkx3-2	ENSMUST00000030741.2|Ptpru|ENSMUSG00000028909.11|protein tyrosine phosphatase, receptor type, U 	ENSMUST00000105987.2|Ptpru|ENSMUSG00000028909.11|protein tyrosine phosphatase, receptor type, U
mm10_v2_chr5_+_30155315_30155336	0.330498	Nkx3-2	ENSMUST00000114783.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit
mm10_v2_chr11_+_49250512_49250572	0.323872	Nkx3-2	ENSMUST00000101293.4|Mgat1|ENSMUSG00000020346.10|mannoside acetylglucosaminyltransferase 1
mm10_v2_chr9_-_101034892_101034904	0.318088	Nkx3-2	ENSMUST00000035116.5|Pccb|ENSMUSG00000032527.7|propionyl Coenzyme A carboxylase, beta polypeptide
mm10_v2_chr15_+_102102926_102102988	0.311651	Nkx3-2	ENSMUST00000169627.1|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase 	ENSMUST00000046144.9|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase
mm10_v2_chr4_-_120747248_120747404	0.310903	Nkx3-2	ENSMUST00000030376.7|Kcnq4|ENSMUSG00000028631.7|potassium voltage-gated channel, subfamily Q, member 4
mm10_v2_chr18_+_73863672_73863713	0.305597	Nkx3-2	ENSMUST00000134847.1|Mro|ENSMUSG00000064036.9|maestro
mm10_v2_chr2_+_20737306_20737321	0.305133	Nkx3-2	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr19_+_8741413_8741461	0.304905	Nkx3-2	ENSMUST00000176381.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr5_+_30155243_30155311	0.304291	Nkx3-2	ENSMUST00000026841.8|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000123980.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000114786.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit
mm10_v2_chr4_-_40239700_40239727	0.297041	Nkx3-2	ENSMUST00000142055.1|Ddx58|ENSMUSG00000040296.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
mm10_v2_chr13_-_19619820_19619830	0.295842	Nkx3-2	ENSMUST00000002885.6|Epdr1|ENSMUSG00000002808.6|ependymin related protein 1 (zebrafish)
mm10_v2_chr8_-_107263248_107263248	0.289105	Nkx3-2	ENSMUST00000080443.6|Rps18-ps3|ENSMUSG00000057657.3|ribosomal protein S18, pseudogene 3
mm10_v2_chr15_+_98092569_98092603	0.286028	Nkx3-2	ENSMUST00000163507.1|Pfkm|ENSMUSG00000033065.7|phosphofructokinase, muscle
mm10_v2_chr7_-_79842287_79842352	0.285048	Nkx3-2	ENSMUST00000049004.6|Anpep|ENSMUSG00000039062.9|alanyl (membrane) aminopeptidase
mm10_v2_chr6_+_96115249_96115311	0.284117	Nkx3-2	ENSMUST00000075080.5|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr18_-_80934054_80934077	0.272161	Nkx3-2	ENSMUST00000091790.3|Atp9b|ENSMUSG00000024566.8|ATPase, class II, type 9B
mm10_v2_chr7_-_19359477_19359488	0.259196	Nkx3-2	ENSMUST00000047036.8|Cd3eap|ENSMUSG00000047649.8|CD3E antigen, epsilon polypeptide associated protein
mm10_v2_chr9_-_57158288_57158338	0.258522	Nkx3-2	ENSMUST00000065358.7|Commd4|ENSMUSG00000032299.9|COMM domain containing 4
mm10_v2_chr8_+_106510853_106510924	0.252761	Nkx3-2	ENSMUST00000080797.6|Cdh3|ENSMUSG00000061048.7|cadherin 3
mm10_v2_chr5_+_135009152_135009317	0.252648	Nkx3-2	ENSMUST00000111216.1|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11 	ENSMUST00000046999.8|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11
mm10_v2_chrX_+_140956892_140956923	0.252063	Nkx3-2	ENSMUST00000112971.1|Atg4a|ENSMUSG00000079418.3|autophagy related 4A, cysteine peptidase
mm10_v2_chr11_-_30954080_30954152	0.250382	Nkx3-2	ENSMUST00000073192.7|Erlec1|ENSMUSG00000020311.11|endoplasmic reticulum lectin 1
mm10_v2_chr4_-_130359915_130359966	0.250148	Nkx3-2	ENSMUST00000134159.2|Zcchc17|ENSMUSG00000028772.13|zinc finger, CCHC domain containing 17
mm10_v2_chr7_+_127904079_127904125	0.241321	Nkx3-2	ENSMUST00000071056.7|Bckdk|ENSMUSG00000030802.8|branched chain ketoacid dehydrogenase kinase
mm10_v2_chr15_+_75596645_75596662	0.235661	Nkx3-2	ENSMUST00000023243.4|Gpihbp1|ENSMUSG00000022579.4|GPI-anchored HDL-binding protein 1
mm10_v2_chr4_+_115828061_115828103	0.234539	Nkx3-2	ENSMUST00000030477.3|Mob3c|ENSMUSG00000028709.3|MOB kinase activator 3C
mm10_v2_chr10_-_42583628_42583639	0.229434	Nkx3-2	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr2_+_131647825_131647825	0.226142	Nkx3-2	ENSMUST00000077150.4|4930425F17Rik|ENSMUSG00000062501.4|RIKEN cDNA 4930425F17 gene
mm10_v2_chr14_+_54360826_54360851	0.223007	Nkx3-2	ENSMUST00000000985.5|Oxa1l|ENSMUSG00000000959.5|oxidase assembly 1-like
mm10_v2_chrX_-_136203637_136203926	0.212351	Nkx3-2	ENSMUST00000151592.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000131510.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000066819.4|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5
mm10_v2_chr11_-_101987004_101987013	0.206669	Nkx3-2	ENSMUST00000107173.2|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) 	ENSMUST00000107172.1|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
mm10_v2_chr11_+_70000578_70000624	0.19585	Nkx3-2	ENSMUST00000019362.8|Dvl2|ENSMUSG00000020888.10|dishevelled 2, dsh homolog (Drosophila)
mm10_v2_chr5_+_149411749_149411811	0.189215	Nkx3-2	ENSMUST00000093110.5|Medag|ENSMUSG00000029659.10|mesenteric estrogen dependent adipogenesis
mm10_v2_chr10_-_30842765_30842801	0.187111	Nkx3-2	ENSMUST00000019924.8|Hey2|ENSMUSG00000019789.8|hairy/enhancer-of-split related with YRPW motif 2
mm10_v2_chr1_-_88008520_88008556	0.182978	Nkx3-2	ENSMUST00000040783.4|Usp40|ENSMUSG00000005501.8|ubiquitin specific peptidase 40
mm10_v2_chr16_+_14705832_14705858	0.182351	Nkx3-2	ENSMUST00000023356.6|Snai2|ENSMUSG00000022676.6|snail homolog 2 (Drosophila)
mm10_v2_chr2_+_28447941_28447941	0.180673	Nkx3-2	ENSMUST00000040324.7|Ppp1r26|ENSMUSG00000035829.7|protein phosphatase 1, regulatory subunit 26
mm10_v2_chr9_-_86464944_86464958	0.179105	Nkx3-2	ENSMUST00000034986.7|Ube2cbp|ENSMUSG00000032415.8|ubiquitin-conjugating enzyme E2C binding protein
mm10_v2_chr6_+_97210689_97210728	0.177257	Nkx3-2	ENSMUST00000044681.6|Arl6ip5|ENSMUSG00000035199.6|ADP-ribosylation factor-like 6 interacting protein 5
mm10_v2_chr7_-_125491586_125491596	0.172387	Nkx3-2	ENSMUST00000033006.7|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chrX_+_153139941_153140011	0.172079	Nkx3-2	ENSMUST00000039720.4|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B 	ENSMUST00000144175.2|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B
mm10_v2_chr9_-_86464900_86464943	0.171241	Nkx3-2	ENSMUST00000121189.1|Ube2cbp|ENSMUSG00000032415.8|ubiquitin-conjugating enzyme E2C binding protein
mm10_v2_chr11_+_72689997_72690015	0.164992	Nkx3-2	ENSMUST00000155998.1|Ankfy1|ENSMUSG00000020790.8|ankyrin repeat and FYVE domain containing 1
mm10_v2_chr16_-_70382385_70382385	0.164138	Nkx3-2	ENSMUST00000072455.4|4930423O20Rik|ENSMUSG00000062087.4|RIKEN cDNA 4930423O20 gene
mm10_v2_chr15_+_11064764_11064797	0.159448	Nkx3-2	ENSMUST00000061318.7|Adamts12|ENSMUSG00000047497.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm10_v2_chr10_+_72309225_72309225	0.156778	Nkx3-2	ENSMUST00000061324.4|Gm9923|ENSMUSG00000053830.3|predicted pseudogene 9923
mm10_v2_chr3_+_88207308_88207328	0.156324	Nkx3-2	ENSMUST00000180582.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr15_-_45114926_45114938	0.155729	Nkx3-2	ENSMUST00000022967.5|Kcnv1|ENSMUSG00000022342.5|potassium channel, subfamily V, member 1
mm10_v2_chr19_+_55898553_55898606	0.154695	Nkx3-2	ENSMUST00000148666.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr5_-_30155101_30155162	0.153179	Nkx3-2	ENSMUST00000156859.1|Hadha|ENSMUSG00000025745.5|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit
mm10_v2_chr17_-_46674255_46674274	0.151444	Nkx3-2	ENSMUST00000024766.6|Rrp36|ENSMUSG00000023971.8|ribosomal RNA processing 36 homolog (S. cerevisiae)
mm10_v2_chr5_-_143527977_143528036	0.147304	Nkx3-2	ENSMUST00000100489.3|Rac1|ENSMUSG00000001847.8|RAS-related C3 botulinum substrate 1 	ENSMUST00000080537.7|Rac1|ENSMUSG00000001847.8|RAS-related C3 botulinum substrate 1
mm10_v2_chr10_+_78425670_78425729	0.147285	Nkx3-2	ENSMUST00000005185.6|Cstb|ENSMUSG00000005054.6|cystatin B
mm10_v2_chr1_-_121332571_121332589	0.14458	Nkx3-2	ENSMUST00000071064.6|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr3_-_95306794_95306810	0.13734	Nkx3-2	ENSMUST00000107183.1|Anxa9|ENSMUSG00000015702.7|annexin A9 	ENSMUST00000164406.1|Anxa9|ENSMUSG00000015702.7|annexin A9 	ENSMUST00000123365.1|Anxa9|ENSMUSG00000015702.7|annexin A9
mm10_v2_chr7_+_80269632_80269726	0.137339	Nkx3-2	ENSMUST00000032749.5|Vps33b|ENSMUSG00000030534.7|vacuolar protein sorting 33B (yeast)
mm10_v2_chr7_+_128237357_128237357	0.137017	Nkx3-2	ENSMUST00000044660.5|Armc5|ENSMUSG00000042178.5|armadillo repeat containing 5
mm10_v2_chr11_+_50237002_50237014	0.136876	Nkx3-2	ENSMUST00000180443.1|Gm26542|ENSMUSG00000097887.1|predicted gene, 26542
mm10_v2_chr19_-_53371766_53371766	0.134388	Nkx3-2	ENSMUST00000086887.1|Gm10197|ENSMUSG00000067085.1|predicted gene 10197
mm10_v2_chr12_-_72408934_72409054	0.134065	Nkx3-2	ENSMUST00000078505.7|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr1_-_161070613_161070674	0.132983	Nkx3-2	ENSMUST00000035430.3|Dars2|ENSMUSG00000026709.4|aspartyl-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr7_-_7136755_7136755	0.132722	Nkx3-2	ENSMUST00000032622.7|Zfp773|ENSMUSG00000063535.6|zinc finger protein 773
mm10_v2_chr2_-_119662756_119662835	0.128828	Nkx3-2	ENSMUST00000028768.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 	ENSMUST00000110801.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 	ENSMUST00000110802.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
mm10_v2_chr2_-_35461247_35461271	0.124765	Nkx3-2	ENSMUST00000113001.2|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3 	ENSMUST00000113002.2|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3
mm10_v2_chr17_+_25875492_25875536	0.1232	Nkx3-2	ENSMUST00000026827.8|0610011F06Rik|ENSMUSG00000025731.9|RIKEN cDNA 0610011F06 gene 	ENSMUST00000169308.1|0610011F06Rik|ENSMUSG00000025731.9|RIKEN cDNA 0610011F06 gene 	ENSMUST00000169085.1|0610011F06Rik|ENSMUSG00000025731.9|RIKEN cDNA 0610011F06 gene 	ENSMUST00000163356.1|0610011F06Rik|ENSMUSG00000025731.9|RIKEN cDNA 0610011F06 gene
mm10_v2_chr1_+_63730614_63730657	0.122168	Nkx3-2	ENSMUST00000027103.6|Fastkd2|ENSMUSG00000025962.9|FAST kinase domains 2
mm10_v2_chr19_-_4839286_4839338	0.120749	Nkx3-2	ENSMUST00000037246.5|Ccs|ENSMUSG00000034108.5|copper chaperone for superoxide dismutase
mm10_v2_chr13_+_30136529_30136594	0.117683	Nkx3-2	ENSMUST00000152798.1|Mboat1|ENSMUSG00000038732.8|membrane bound O-acyltransferase domain containing 1
mm10_v2_chr13_+_99344775_99344806	0.115053	Nkx3-2	ENSMUST00000052249.5|Mrps27|ENSMUSG00000041632.5|mitochondrial ribosomal protein S27
mm10_v2_chr13_-_34963788_34963816	0.111567	Nkx3-2	ENSMUST00000164155.1|Eci3|ENSMUSG00000021416.5|enoyl-Coenzyme A delta isomerase 3 	ENSMUST00000021853.5|Eci3|ENSMUSG00000021416.5|enoyl-Coenzyme A delta isomerase 3
mm10_v2_chr11_-_101417615_101417615	0.108879	Nkx3-2	ENSMUST00000070395.8|Aarsd1|ENSMUSG00000075528.7|alanyl-tRNA synthetase domain containing 1
mm10_v2_chr2_+_32363192_32363262	0.106694	Nkx3-2	ENSMUST00000048964.7|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1 	ENSMUST00000113332.1|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1
mm10_v2_chr1_-_193130201_193130257	0.106483	Nkx3-2	ENSMUST00000085555.1|Diexf|ENSMUSG00000016181.4|digestive organ expansion factor homolog (zebrafish)
mm10_v2_chr7_-_128237984_128238031	0.105917	Nkx3-2	ENSMUST00000078816.3|9130023H24Rik|ENSMUSG00000062944.3|RIKEN cDNA 9130023H24 gene
mm10_v2_chr7_+_130774069_130774185	0.10141	Nkx3-2	ENSMUST00000048453.5|Btbd16|ENSMUSG00000040298.5|BTB (POZ) domain containing 16
mm10_v2_chr16_+_21204755_21204787	0.0990593	Nkx3-2	ENSMUST00000006112.6|Ephb3|ENSMUSG00000005958.8|Eph receptor B3
mm10_v2_chr13_+_55622999_55623084	0.0974419	Nkx3-2	ENSMUST00000021963.4|Caml|ENSMUSG00000021501.4|calcium modulating ligand
mm10_v2_chr7_-_25882407_25882407	0.0973246	Nkx3-2	ENSMUST00000163316.2|Gm6434|ENSMUSG00000091233.2|predicted gene 6434
mm10_v2_chr15_-_10470490_10470527	0.0952382	Nkx3-2	ENSMUST00000136591.1|Dnajc21|ENSMUSG00000044224.10|DnaJ (Hsp40) homolog, subfamily C, member 21
mm10_v2_chr1_+_11414089_11414146	0.0897109	Nkx3-2	ENSMUST00000048613.7|A830018L16Rik|ENSMUSG00000057715.7|RIKEN cDNA A830018L16 gene 	ENSMUST00000171690.2|A830018L16Rik|ENSMUSG00000057715.7|RIKEN cDNA A830018L16 gene 	ENSMUST00000137824.1|A830018L16Rik|ENSMUSG00000057715.7|RIKEN cDNA A830018L16 gene 	ENSMUST00000135014.1|A830018L16Rik|ENSMUSG00000057715.7|RIKEN cDNA A830018L16 gene 	ENSMUST00000179089.1|A830018L16Rik|ENSMUSG00000095719.1|RIKEN cDNA A830018L16 gene
mm10_v2_chr10_-_86732409_86732429	0.0836926	Nkx3-2	ENSMUST00000070435.4|Fabp3-ps1|ENSMUSG00000056366.4|fatty acid binding protein 3, muscle and heart, pseudogene 1
mm10_v2_chr9_+_112234257_112234381	0.0824842	Nkx3-2	ENSMUST00000149308.3|2900079G21Rik|ENSMUSG00000087038.3|RIKEN cDNA 2900079G21 gene 	ENSMUST00000144424.2|2900079G21Rik|ENSMUSG00000087038.3|RIKEN cDNA 2900079G21 gene 	ENSMUST00000139552.2|2900079G21Rik|ENSMUSG00000087038.3|RIKEN cDNA 2900079G21 gene
mm10_v2_chr17_+_87078255_87078267	0.0824281	Nkx3-2	ENSMUST00000090731.5|Gm5499|ENSMUSG00000071035.4|predicted pseudogene 5499
mm10_v2_chr10_-_13474361_13474441	0.0823115	Nkx3-2	ENSMUST00000105547.1|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr19_-_6067785_6067865	0.0822263	Nkx3-2	ENSMUST00000162575.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000159084.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000161718.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000162810.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000025713.5|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000113543.2|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000161528.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2
mm10_v2_chr5_-_31154152_31154253	0.0797335	Nkx3-2	ENSMUST00000114632.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000114631.2|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000067186.6|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000137165.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000131391.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000141823.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000154241.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein
mm10_v2_chr5_+_122707546_122707654	0.0789424	Nkx3-2	ENSMUST00000081554.6|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000031429.7|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000139631.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000142664.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4
mm10_v2_chr16_-_18413452_18413494	0.0776489	Nkx3-2	ENSMUST00000165430.1|Comt|ENSMUSG00000000326.6|catechol-O-methyltransferase 	ENSMUST00000147720.1|Comt|ENSMUSG00000000326.6|catechol-O-methyltransferase
mm10_v2_chr13_-_98316967_98317006	0.0770566	Nkx3-2	ENSMUST00000022163.8|Btf3|ENSMUSG00000021660.8|basic transcription factor 3 	ENSMUST00000152704.1|Btf3|ENSMUSG00000021660.8|basic transcription factor 3
mm10_v2_chr11_-_5741141_5741182	0.0766867	Nkx3-2	ENSMUST00000140922.1|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation 	ENSMUST00000093362.5|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation
mm10_v2_chr5_-_144223516_144223618	0.0751518	Nkx3-2	ENSMUST00000085701.6|Tecpr1|ENSMUSG00000066621.6|tectonin beta-propeller repeat containing 1
mm10_v2_chr2_-_164404606_164404621	0.0720327	Nkx3-2	ENSMUST00000109359.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000109358.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000103103.3|Matn4|ENSMUSG00000016995.11|matrilin 4
mm10_v2_chr11_+_97703394_97703455	0.0718689	Nkx3-2	ENSMUST00000103147.4|Psmb3|ENSMUSG00000069744.7|proteasome (prosome, macropain) subunit, beta type 3
mm10_v2_chr5_-_24445254_24445287	0.0694452	Nkx3-2	ENSMUST00000030800.6|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr9_+_123034731_123034752	0.0645109	Nkx3-2	ENSMUST00000026893.4|Tgm4|ENSMUSG00000025787.5|transglutaminase 4 (prostate)
mm10_v2_chr2_+_32363004_32363142	0.063748	Nkx3-2	ENSMUST00000132028.1|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1 	ENSMUST00000136079.1|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1
mm10_v2_chr5_-_100674230_100674284	0.0636475	Nkx3-2	ENSMUST00000031262.7|Coq2|ENSMUSG00000029319.7|coenzyme Q2 homolog, prenyltransferase (yeast)
mm10_v2_chr17_-_75551838_75551946	0.0621557	Nkx3-2	ENSMUST00000112507.3|Fam98a|ENSMUSG00000002017.9|family with sequence similarity 98, member A
mm10_v2_chr6_+_49367739_49367896	0.0617617	Nkx3-2	ENSMUST00000060561.8|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A 	ENSMUST00000121903.1|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A 	ENSMUST00000134786.1|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A
mm10_v2_chr2_+_32363163_32363177	0.0601109	Nkx3-2	ENSMUST00000145635.1|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1
mm10_v2_chr2_-_153632679_153632757	0.0600867	Nkx3-2	ENSMUST00000109782.1|Commd7|ENSMUSG00000056941.11|COMM domain containing 7
mm10_v2_chr9_+_105053239_105053259	0.0572687	Nkx3-2	ENSMUST00000035177.8|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3 	ENSMUST00000149243.1|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3
mm10_v2_chr8_-_122551316_122551333	0.0570419	Nkx3-2	ENSMUST00000067252.7|Piezo1|ENSMUSG00000014444.10|piezo-type mechanosensitive ion channel component 1
mm10_v2_chr4_-_132884509_132884523	0.0566856	Nkx3-2	ENSMUST00000030698.4|Stx12|ENSMUSG00000028879.4|syntaxin 12
mm10_v2_chr7_+_103550368_103550368	0.056351	Nkx3-2	ENSMUST00000106888.1|Olfr613|ENSMUSG00000078624.2|olfactory receptor 613
mm10_v2_chr2_-_147085445_147085483	0.0521848	Nkx3-2	ENSMUST00000067020.2|Nkx2-4|ENSMUSG00000054160.2|NK2 homeobox 4
mm10_v2_chr11_-_72489904_72489979	0.0515639	Nkx3-2	ENSMUST00000045303.3|Spns2|ENSMUSG00000040447.9|spinster homolog 2
mm10_v2_chr7_-_28741780_28741843	0.0513162	Nkx3-2	ENSMUST00000056078.8|Mrps12|ENSMUSG00000045948.8|mitochondrial ribosomal protein S12
mm10_v2_chr7_+_3694512_3694552	0.05064	Nkx3-2	ENSMUST00000108627.3|Tsen34|ENSMUSG00000035585.10|tRNA splicing endonuclease 34 homolog (S. cerevisiae)
mm10_v2_chr8_+_113635550_113635597	0.0489331	Nkx3-2	ENSMUST00000179926.1|Mon1b|ENSMUSG00000078908.3|MON1 homolog b (yeast)
mm10_v2_chr19_-_24555819_24555888	0.0466662	Nkx3-2	ENSMUST00000112673.2|Pip5k1b|ENSMUSG00000024867.8|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta 	ENSMUST00000025800.8|Pip5k1b|ENSMUSG00000024867.8|phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
mm10_v2_chr3_+_129199878_129199913	0.042853	Nkx3-2	ENSMUST00000174661.2|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2
mm10_v2_chr1_-_160077918_160077944	0.0423381	Nkx3-2	ENSMUST00000028061.3|4930562F07Rik|ENSMUSG00000026729.4|RIKEN cDNA 4930562F07 gene
mm10_v2_chr2_+_104027721_104027780	0.0402837	Nkx3-2	ENSMUST00000028603.3|Fbxo3|ENSMUSG00000027180.6|F-box protein 3
mm10_v2_chr16_+_20535475_20535546	0.0395696	Nkx3-2	ENSMUST00000090023.6|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit 	ENSMUST00000007216.8|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit
mm10_v2_chr9_-_65908676_65908798	0.0391314	Nkx3-2	ENSMUST00000119245.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000134338.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000179395.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4
mm10_v2_chr2_-_35461365_35461449	0.0340108	Nkx3-2	ENSMUST00000102794.1|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3
mm10_v2_chr4_+_56802337_56802359	0.0334825	Nkx3-2	ENSMUST00000045368.5|BC026590|ENSMUSG00000038827.5|cDNA sequence BC026590
mm10_v2_chr5_+_64230285_64230312	0.0319004	Nkx3-2	ENSMUST00000119756.1|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr11_-_35798884_35798884	0.0296816	Nkx3-2	ENSMUST00000160726.2|Fbll1|ENSMUSG00000051062.5|fibrillarin-like 1
mm10_v2_chr13_-_99344652_99344706	0.0286619	Nkx3-2	ENSMUST00000022153.6|Ptcd2|ENSMUSG00000021650.6|pentatricopeptide repeat domain 2
mm10_v2_chrX_+_110814390_110814413	0.0276377	Nkx3-2	ENSMUST00000078229.3|Pou3f4|ENSMUSG00000056854.3|POU domain, class 3, transcription factor 4
mm10_v2_chr2_+_158794807_158794892	0.026588	Nkx3-2	ENSMUST00000029186.7|Dhx35|ENSMUSG00000027655.8|DEAH (Asp-Glu-Ala-His) box polypeptide 35 	ENSMUST00000109478.2|Dhx35|ENSMUSG00000027655.8|DEAH (Asp-Glu-Ala-His) box polypeptide 35 	ENSMUST00000156893.1|Dhx35|ENSMUSG00000027655.8|DEAH (Asp-Glu-Ala-His) box polypeptide 35
mm10_v2_chr8_-_26015577_26015626	0.025035	Nkx3-2	ENSMUST00000016138.9|Fnta|ENSMUSG00000015994.9|farnesyltransferase, CAAX box, alpha
mm10_v2_chr3_+_103914560_103914605	0.0190205	Nkx3-2	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr3_-_36613285_36613367	0.0187678	Nkx3-2	ENSMUST00000108155.1|Bbs7|ENSMUSG00000037325.4|Bardet-Biedl syndrome 7 (human)
mm10_v2_chr18_+_5591860_5591902	0.0164243	Nkx3-2	ENSMUST00000025081.5|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1 	ENSMUST00000159390.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chrX_+_166170449_166170512	0.0159645	Nkx3-2	ENSMUST00000130880.2|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000056410.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000096252.3|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000087169.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8
mm10_v2_chr8_+_113635787_113635842	0.0148461	Nkx3-2	ENSMUST00000035777.8|Mon1b|ENSMUSG00000078908.3|MON1 homolog b (yeast)
mm10_v2_chr1_-_171247096_171247122	0.0134196	Nkx3-2	ENSMUST00000013737.6|Ndufs2|ENSMUSG00000013593.6|NADH dehydrogenase (ubiquinone) Fe-S protein 2 	ENSMUST00000111318.1|Ndufs2|ENSMUSG00000013593.6|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm10_v2_chr9_+_72806874_72806874	0.0133791	Nkx3-2	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr1_+_164048214_164048234	0.0116826	Nkx3-2	ENSMUST00000027874.5|Sele|ENSMUSG00000026582.6|selectin, endothelial cell
mm10_v2_chr4_-_40948196_40948296	0.00904475	Nkx3-2	ENSMUST00000030125.4|Bag1|ENSMUSG00000028416.5|BCL2-associated athanogene 1 	ENSMUST00000108089.1|Bag1|ENSMUSG00000028416.5|BCL2-associated athanogene 1
mm10_v2_chr10_+_53596936_53597004	0.00609977	Nkx3-2	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chr19_+_46599081_46599150	0.00594858	Nkx3-2	ENSMUST00000138302.2|Wbp1l|ENSMUSG00000047731.11|WW domain binding protein 1 like 	ENSMUST00000099376.4|Wbp1l|ENSMUSG00000047731.11|WW domain binding protein 1 like
mm10_v2_chr2_-_167062981_167063048	0.00243104	Nkx3-2	ENSMUST00000048988.7|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
