mm10_v2_chr11_-_95587691_95587735	3.37598	Pax6	ENSMUST00000000122.6|Ngfr|ENSMUSG00000000120.6|nerve growth factor receptor (TNFR superfamily, member 16)
mm10_v2_chr10_+_26229707_26229763	2.69247	Pax6	ENSMUST00000060716.5|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3 	ENSMUST00000164660.1|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3
mm10_v2_chr8_-_57962564_57962564	1.83967	Pax6	ENSMUST00000098757.3|Galntl6|ENSMUSG00000096914.1|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm10_v2_chr16_+_4968936_4968936	1.37522	Pax6	ENSMUST00000090457.5|4930451G09Rik|ENSMUSG00000022543.8|RIKEN cDNA 4930451G09 gene
mm10_v2_chr1_-_138619687_138619759	1.23732	Pax6	ENSMUST00000027642.2|Nek7|ENSMUSG00000026393.4|NIMA (never in mitosis gene a)-related expressed kinase 7
mm10_v2_chr7_-_103843154_103843169	1.18211	Pax6	ENSMUST00000063957.4|Hbb-bh1|ENSMUSG00000052217.5|hemoglobin Z, beta-like embryonic chain
mm10_v2_chr5_+_149265035_149265058	1.09899	Pax6	ENSMUST00000130144.1|Alox5ap|ENSMUSG00000060063.6|arachidonate 5-lipoxygenase activating protein 	ENSMUST00000071130.3|Alox5ap|ENSMUSG00000060063.6|arachidonate 5-lipoxygenase activating protein
mm10_v2_chr5_-_142906702_142906754	1.09005	Pax6	ENSMUST00000167721.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000163829.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000100497.4|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr4_+_85205417_85205535	1.07612	Pax6	ENSMUST00000030212.8|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107189.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107184.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2
mm10_v2_chr10_+_94550852_94550876	0.874442	Pax6	ENSMUST00000148910.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3 	ENSMUST00000117460.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr8_+_105860634_105860661	0.745601	Pax6	ENSMUST00000008594.7|Nutf2|ENSMUSG00000008450.7|nuclear transport factor 2
mm10_v2_chr11_-_67965631_67965663	0.684605	Pax6	ENSMUST00000021287.5|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16 	ENSMUST00000126766.1|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16
mm10_v2_chr15_+_84669565_84669620	0.619343	Pax6	ENSMUST00000171460.1|Prr5|ENSMUSG00000036106.9|proline rich 5 (renal)
mm10_v2_chr12_-_45074457_45074493	0.592596	Pax6	ENSMUST00000053768.6|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn)
mm10_v2_chr1_+_156040909_156040925	0.591051	Pax6	ENSMUST00000065648.8|Tor1aip2|ENSMUSG00000050565.10|torsin A interacting protein 2 	ENSMUST00000097526.2|Tor1aip2|ENSMUSG00000050565.10|torsin A interacting protein 2
mm10_v2_chr9_-_10904697_10904726	0.559551	Pax6	ENSMUST00000162484.1|Cntn5|ENSMUSG00000039488.9|contactin 5
mm10_v2_chr13_-_66905322_66905378	0.523045	Pax6	ENSMUST00000021993.4|Uqcrb|ENSMUSG00000021520.4|ubiquinol-cytochrome c reductase binding protein
mm10_v2_chr9_+_15239045_15239155	0.4994	Pax6	ENSMUST00000034413.6|Vstm5|ENSMUSG00000031937.6|V-set and transmembrane domain containing 5
mm10_v2_chr19_-_57118981_57119026	0.467698	Pax6	ENSMUST00000111528.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1 	ENSMUST00000111529.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1 	ENSMUST00000104902.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr18_-_34373313_34373443	0.462821	Pax6	ENSMUST00000006027.5|Reep5|ENSMUSG00000005873.5|receptor accessory protein 5
mm10_v2_chrX_+_36795642_36795653	0.443486	Pax6	ENSMUST00000016463.3|Slc25a5|ENSMUSG00000016319.3|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm10_v2_chr19_-_57118897_57118979	0.435641	Pax6	ENSMUST00000111526.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr15_-_35938186_35938246	0.434977	Pax6	ENSMUST00000014457.8|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr5_+_123907175_123907292	0.431948	Pax6	ENSMUST00000023869.8|Denr|ENSMUSG00000023106.9|density-regulated protein
mm10_v2_chr3_-_89245005_89245031	0.417123	Pax6	ENSMUST00000107464.1|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr6_-_60829826_60829855	0.413861	Pax6	ENSMUST00000163779.1|Snca|ENSMUSG00000025889.7|synuclein, alpha
mm10_v2_chr11_+_60699718_60699750	0.406852	Pax6	ENSMUST00000052346.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr4_+_155491353_155491411	0.403968	Pax6	ENSMUST00000165335.1|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000105616.3|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000030940.7|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1
mm10_v2_chr6_-_113377376_113377396	0.363429	Pax6	ENSMUST00000043333.2|Tada3|ENSMUSG00000048930.6|transcriptional adaptor 3
mm10_v2_chr14_+_34170640_34170655	0.357866	Pax6	ENSMUST00000104925.3|Rpl23a-ps3|ENSMUSG00000078126.3|ribosomal protein L23A, pseudogene 3
mm10_v2_chr8_+_95825353_95825354	0.355879	Pax6	ENSMUST00000074053.4|Gm10094|ENSMUSG00000061104.4|predicted gene 10094
mm10_v2_chr11_+_60699758_60699845	0.338548	Pax6	ENSMUST00000108719.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr15_-_101850778_101850792	0.329603	Pax6	ENSMUST00000023790.3|Krt1|ENSMUSG00000046834.6|keratin 1
mm10_v2_chr9_+_64179289_64179349	0.320671	Pax6	ENSMUST00000034965.6|Snapc5|ENSMUSG00000032398.6|small nuclear RNA activating complex, polypeptide 5
mm10_v2_chr4_+_129820702_129820709	0.319333	Pax6	ENSMUST00000165853.1|Ptp4a2|ENSMUSG00000028788.8|protein tyrosine phosphatase 4a2
mm10_v2_chr3_-_89245159_89245199	0.318868	Pax6	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chrX_+_103422010_103422010	0.313922	Pax6	ENSMUST00000182089.1|Gm26992|ENSMUSG00000098078.1|predicted gene, 26992
mm10_v2_chr10_-_127030813_127030840	0.313546	Pax6	ENSMUST00000040560.4|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr17_+_43016536_43016591	0.292815	Pax6	ENSMUST00000024708.4|Tnfrsf21|ENSMUSG00000023915.4|tumor necrosis factor receptor superfamily, member 21
mm10_v2_chr6_-_88045190_88045270	0.284709	Pax6	ENSMUST00000113596.1|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family 	ENSMUST00000113600.3|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family
mm10_v2_chr16_-_52452654_52452654	0.261417	Pax6	ENSMUST00000168071.1|Alcam|ENSMUSG00000022636.7|activated leukocyte cell adhesion molecule
mm10_v2_chr4_-_3835595_3835665	0.257406	Pax6	ENSMUST00000138502.1|Rps20|ENSMUSG00000028234.6|ribosomal protein S20
mm10_v2_chr5_-_134639311_134639348	0.257225	Pax6	ENSMUST00000036125.8|Eif4h|ENSMUSG00000040731.10|eukaryotic translation initiation factor 4H
mm10_v2_chr15_-_35938009_35938178	0.246447	Pax6	ENSMUST00000156915.1|Cox6c|ENSMUSG00000014313.8|cytochrome c oxidase subunit VIc
mm10_v2_chr2_+_163602294_163602322	0.237741	Pax6	ENSMUST00000171696.1|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like 	ENSMUST00000109408.3|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like
mm10_v2_chr19_+_34290653_34290668	0.228741	Pax6	ENSMUST00000025691.5|Fas|ENSMUSG00000024778.6|Fas (TNF receptor superfamily member 6) 	ENSMUST00000112472.2|Fas|ENSMUSG00000024778.6|Fas (TNF receptor superfamily member 6)
mm10_v2_chr16_+_20498817_20498866	0.227344	Pax6	ENSMUST00000003320.6|Eif2b5|ENSMUSG00000003235.6|eukaryotic translation initiation factor 2B, subunit 5 epsilon
mm10_v2_chr1_-_38836090_38836090	0.211102	Pax6	ENSMUST00000147695.1|Lonrf2|ENSMUSG00000048814.4|LON peptidase N-terminal domain and ring finger 2
mm10_v2_chr17_-_43543639_43543639	0.20376	Pax6	ENSMUST00000178772.1|Ankrd66|ENSMUSG00000096140.1|ankyrin repeat domain 66
mm10_v2_chr4_-_139832920_139833007	0.195644	Pax6	ENSMUST00000174681.1|Pax7|ENSMUSG00000028736.7|paired box gene 7
mm10_v2_chr13_-_32781716_32781779	0.195569	Pax6	ENSMUST00000134352.1|Mylk4|ENSMUSG00000044951.7|myosin light chain kinase family, member 4 	ENSMUST00000057428.4|Mylk4|ENSMUSG00000044951.7|myosin light chain kinase family, member 4
mm10_v2_chr15_+_103272893_103272911	0.193397	Pax6	ENSMUST00000100162.3|Copz1|ENSMUSG00000060992.8|coatomer protein complex, subunit zeta 1
mm10_v2_chr15_+_6299797_6299851	0.188646	Pax6	ENSMUST00000159046.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000161040.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr9_+_92250039_92250060	0.178675	Pax6	ENSMUST00000093801.3|Plscr1|ENSMUSG00000032369.7|phospholipid scramblase 1
mm10_v2_chr17_+_29614800_29614844	0.156306	Pax6	ENSMUST00000162588.1|Rnf8|ENSMUSG00000090083.4|ring finger protein 8
mm10_v2_chr6_+_123229843_123229863	0.153528	Pax6	ENSMUST00000112554.2|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000024118.4|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000117130.1|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n
mm10_v2_chr13_-_97760588_97760633	0.152232	Pax6	ENSMUST00000074072.3|Gm10260|ENSMUSG00000069117.3|predicted gene 10260
mm10_v2_chr13_+_66905415_66905415	0.148225	Pax6	ENSMUST00000099412.2|Gm10767|ENSMUSG00000074826.4|predicted gene 10767
mm10_v2_chr12_+_112976471_112976563	0.1358	Pax6	ENSMUST00000165079.1|Btbd6|ENSMUSG00000002803.7|BTB (POZ) domain containing 6 	ENSMUST00000002880.6|Btbd6|ENSMUSG00000002803.7|BTB (POZ) domain containing 6
mm10_v2_chr6_-_145048809_145048821	0.133	Pax6	ENSMUST00000032402.5|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr7_-_86775808_86775839	0.129126	Pax6	ENSMUST00000107271.3|Folh1|ENSMUSG00000001773.7|folate hydrolase 1
mm10_v2_chr8_+_109614417_109614517	0.127068	Pax6	ENSMUST00000109242.1|Pkd1l3|ENSMUSG00000048827.5|polycystic kidney disease 1 like 3 	ENSMUST00000057344.2|Pkd1l3|ENSMUSG00000048827.5|polycystic kidney disease 1 like 3
mm10_v2_chr17_+_34604262_34604304	0.122672	Pax6	ENSMUST00000174041.1|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr1_-_180813534_180813583	0.122403	Pax6	ENSMUST00000159789.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000081026.4|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr2_-_75981967_75981967	0.115058	Pax6	ENSMUST00000099994.3|Ttc30a1|ENSMUSG00000075271.3|tetratricopeptide repeat domain 30A1
mm10_v2_chr5_+_90903864_90903899	0.0999275	Pax6	ENSMUST00000075433.6|Cxcl2|ENSMUSG00000058427.7|chemokine (C-X-C motif) ligand 2
mm10_v2_chr9_-_62811592_62811659	0.0844388	Pax6	ENSMUST00000034775.8|Fem1b|ENSMUSG00000032244.8|feminization 1 homolog b (C. elegans)
mm10_v2_chr1_-_180813591_180813632	0.08432	Pax6	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr14_-_43819639_43819639	0.0830511	Pax6	ENSMUST00000100691.3|Ear1|ENSMUSG00000072601.4|eosinophil-associated, ribonuclease A family, member 1
mm10_v2_chr2_+_105904629_105904685	0.0827209	Pax6	ENSMUST00000037499.5|Immp1l|ENSMUSG00000042670.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
mm10_v2_chr6_-_122856151_122856163	0.0812631	Pax6	ENSMUST00000042081.8|C3ar1|ENSMUSG00000040552.8|complement component 3a receptor 1
mm10_v2_chr7_-_86775860_86775872	0.066813	Pax6	ENSMUST00000001824.5|Folh1|ENSMUSG00000001773.7|folate hydrolase 1
mm10_v2_chr10_-_127030789_127030812	0.0654937	Pax6	ENSMUST00000120547.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial 	ENSMUST00000152054.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr7_+_12897800_12897885	0.061431	Pax6	ENSMUST00000055528.4|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000117189.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000120809.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22 	ENSMUST00000119989.1|Zscan22|ENSMUSG00000054715.4|zinc finger and SCAN domain containing 22
mm10_v2_chr11_+_67966442_67966497	0.0458291	Pax6	ENSMUST00000021286.4|Stx8|ENSMUSG00000020903.7|syntaxin 8 	ENSMUST00000108675.1|Stx8|ENSMUSG00000020903.7|syntaxin 8
mm10_v2_chr15_+_6299781_6299795	0.0437468	Pax6	ENSMUST00000078019.6|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr11_+_45852031_45852051	0.0385379	Pax6	ENSMUST00000109261.3|Clint1|ENSMUSG00000006169.13|clathrin interactor 1 	ENSMUST00000109260.1|Clint1|ENSMUSG00000006169.13|clathrin interactor 1
mm10_v2_chr9_+_50775347_50775369	0.0274049	Pax6	ENSMUST00000159576.1|Alg9|ENSMUSG00000032059.7|asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
mm10_v2_chr8_-_72475212_72475244	0.0270874	Pax6	ENSMUST00000079510.4|Cherp|ENSMUSG00000052488.6|calcium homeostasis endoplasmic reticulum protein
mm10_v2_chrX_+_73214333_73214432	0.0267455	Pax6	ENSMUST00000156188.1|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000069077.3|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000069103.4|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000114506.1|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B 	ENSMUST00000081827.3|Xlr4b|ENSMUSG00000067768.6|X-linked lymphocyte-regulated 4B
mm10_v2_chr5_+_112255813_112255874	0.0135405	Pax6	ENSMUST00000031286.6|Crybb1|ENSMUSG00000029343.11|crystallin, beta B1 	ENSMUST00000131673.1|Crybb1|ENSMUSG00000029343.11|crystallin, beta B1 	ENSMUST00000112375.1|Crybb1|ENSMUSG00000029343.11|crystallin, beta B1
mm10_v2_chr7_-_80901220_80901269	0.00215495	Pax6	ENSMUST00000146402.1|Wdr73|ENSMUSG00000025722.10|WD repeat domain 73 	ENSMUST00000026816.8|Wdr73|ENSMUSG00000025722.10|WD repeat domain 73
