mm10_v2_chr17_+_34398802_34398841	0.526101	Rfx5	ENSMUST00000114175.1|BC051142|ENSMUSG00000057246.8|cDNA sequence BC051142 	ENSMUST00000078615.5|BC051142|ENSMUSG00000057246.8|cDNA sequence BC051142 	ENSMUST00000139063.1|BC051142|ENSMUSG00000057246.8|cDNA sequence BC051142 	ENSMUST00000097348.2|BC051142|ENSMUSG00000057246.8|cDNA sequence BC051142
mm10_v2_chr11_+_117523526_117523603	0.520812	Rfx5	ENSMUST00000132261.1|Gm11734|ENSMUSG00000085419.1|predicted gene 11734
mm10_v2_chr17_+_34135182_34135182	0.474215	Rfx5	ENSMUST00000042121.9|H2-DMa|ENSMUSG00000037649.9|histocompatibility 2, class II, locus DMa
mm10_v2_chr17_+_34305883_34305909	0.41793	Rfx5	ENSMUST00000074557.8|H2-Eb1|ENSMUSG00000060586.9|histocompatibility 2, class II antigen E beta
mm10_v2_chr7_-_45091713_45091734	0.347813	Rfx5	ENSMUST00000141576.1|Rcn3|ENSMUSG00000019539.4|reticulocalbin 3, EF-hand calcium binding domain
mm10_v2_chr1_-_183147461_183147461	0.335751	Rfx5	ENSMUST00000171366.1|Disp1|ENSMUSG00000030768.6|dispatched homolog 1 (Drosophila)
mm10_v2_chr9_+_21196705_21196771	0.328642	Rfx5	ENSMUST00000003395.9|Pde4a|ENSMUSG00000032177.10|phosphodiesterase 4A, cAMP specific
mm10_v2_chr7_+_100537192_100537232	0.264121	Rfx5	ENSMUST00000120454.1|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr17_+_35861343_35861486	0.263908	Rfx5	ENSMUST00000172931.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr7_-_105752193_105752234	0.226994	Rfx5	ENSMUST00000033184.4|Tpp1|ENSMUSG00000030894.4|tripeptidyl peptidase I
mm10_v2_chr2_-_92434027_92434053	0.203282	Rfx5	ENSMUST00000111278.1|Cry2|ENSMUSG00000068742.5|cryptochrome 2 (photolyase-like) 	ENSMUST00000090559.5|Cry2|ENSMUSG00000068742.5|cryptochrome 2 (photolyase-like)
mm10_v2_chr1_+_134405984_134406005	0.199742	Rfx5	ENSMUST00000173908.1|Cyb5r1|ENSMUSG00000026456.12|cytochrome b5 reductase 1
mm10_v2_chr4_-_35845204_35845204	0.185646	Rfx5	ENSMUST00000164772.1|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2 	ENSMUST00000065173.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr17_+_37270214_37270249	0.185487	Rfx5	ENSMUST00000038580.6|H2-M3|ENSMUSG00000016206.6|histocompatibility 2, M region locus 3
mm10_v2_chr2_-_152398046_152398076	0.165475	Rfx5	ENSMUST00000063332.8|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12 	ENSMUST00000182625.1|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12
mm10_v2_chr7_+_44468020_44468045	0.164959	Rfx5	ENSMUST00000117324.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2 	ENSMUST00000120852.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2 	ENSMUST00000118628.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2
mm10_v2_chr7_+_44467980_44468014	0.156716	Rfx5	ENSMUST00000035844.4|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2
mm10_v2_chr18_+_60803838_60803856	0.155125	Rfx5	ENSMUST00000050487.8|Cd74|ENSMUSG00000024610.8|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) 	ENSMUST00000097563.2|Cd74|ENSMUSG00000024610.8|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) 	ENSMUST00000167610.1|Cd74|ENSMUSG00000024610.8|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
mm10_v2_chr7_-_101921186_101921230	0.147115	Rfx5	ENSMUST00000106965.1|Lrrc51|ENSMUSG00000064307.6|leucine rich repeat containing 51 	ENSMUST00000106968.1|Lrrc51|ENSMUSG00000064307.6|leucine rich repeat containing 51 	ENSMUST00000106967.1|Lrrc51|ENSMUSG00000064307.6|leucine rich repeat containing 51
mm10_v2_chr7_+_44468051_44468072	0.146372	Rfx5	ENSMUST00000118493.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2
mm10_v2_chr17_+_35861318_35861339	0.140253	Rfx5	ENSMUST00000074259.8|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein) 	ENSMUST00000174873.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr7_+_100537052_100537139	0.132399	Rfx5	ENSMUST00000054310.3|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr17_+_34187545_34187571	0.124121	Rfx5	ENSMUST00000170086.1|Tap1|ENSMUSG00000037321.11|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
mm10_v2_chr17_-_24886304_24886353	0.120689	Rfx5	ENSMUST00000044252.5|Nubp2|ENSMUSG00000039183.5|nucleotide binding protein 2
mm10_v2_chr14_+_55618023_55618037	0.11952	Rfx5	ENSMUST00000002395.7|Rec8|ENSMUSG00000002324.7|REC8 homolog (yeast)
mm10_v2_chr8_-_85067982_85067982	0.114301	Rfx5	ENSMUST00000177563.1|Gm5741|ENSMUSG00000095845.1|predicted gene 5741
mm10_v2_chr11_-_3539228_3539292	0.108746	Rfx5	ENSMUST00000075118.3|Smtn|ENSMUSG00000020439.11|smoothelin 	ENSMUST00000136243.1|Smtn|ENSMUSG00000020439.11|smoothelin 	ENSMUST00000170588.1|Smtn|ENSMUSG00000020439.11|smoothelin 	ENSMUST00000020721.8|Smtn|ENSMUSG00000020439.11|smoothelin
mm10_v2_chr18_-_51865881_51865881	0.107543	Rfx5	ENSMUST00000091905.2|Gm4950|ENSMUSG00000069379.2|predicted pseudogene 4950
mm10_v2_chr17_+_24886643_24886765	0.107377	Rfx5	ENSMUST00000117890.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000168265.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000120943.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000068508.6|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000119829.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3
mm10_v2_chr11_+_98682554_98682573	0.0969331	Rfx5	ENSMUST00000017365.8|Psmd3|ENSMUSG00000017221.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm10_v2_chr9_+_44772951_44772964	0.0911092	Rfx5	ENSMUST00000128150.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr5_-_125294107_125294136	0.090185	Rfx5	ENSMUST00000127148.1|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1
mm10_v2_chr9_+_44773191_44773263	0.0824813	Rfx5	ENSMUST00000147559.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chrX_+_42526585_42526585	0.0824739	Rfx5	ENSMUST00000101619.3|Gm10483|ENSMUSG00000073231.3|predicted gene 10483
mm10_v2_chr9_-_21291124_21291209	0.0772291	Rfx5	ENSMUST00000086374.6|Cdkn2d|ENSMUSG00000096472.1|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
mm10_v2_chr7_-_19692596_19692658	0.077178	Rfx5	ENSMUST00000108451.2|Apoc1|ENSMUSG00000040564.7|apolipoprotein C-I 	ENSMUST00000045035.4|Apoc1|ENSMUSG00000040564.7|apolipoprotein C-I
mm10_v2_chr17_+_34187789_34187828	0.0749297	Rfx5	ENSMUST00000041633.8|Tap1|ENSMUSG00000037321.11|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
mm10_v2_chr19_+_34217588_34217624	0.0729565	Rfx5	ENSMUST00000119603.1|Stambpl1|ENSMUSG00000024776.11|STAM binding protein like 1
mm10_v2_chr3_-_95882031_95882074	0.0720097	Rfx5	ENSMUST00000161994.1|Gm129|ENSMUSG00000038550.4|predicted gene 129
mm10_v2_chr9_+_44773027_44773100	0.0707721	Rfx5	ENSMUST00000125877.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr8_+_84969587_84969636	0.0676042	Rfx5	ENSMUST00000109734.1|Prdx2|ENSMUSG00000005161.9|peroxiredoxin 2 	ENSMUST00000005292.8|Prdx2|ENSMUSG00000005161.9|peroxiredoxin 2
mm10_v2_chr7_-_101921175_101921183	0.0611747	Rfx5	ENSMUST00000098236.2|Lrrc51|ENSMUSG00000064307.6|leucine rich repeat containing 51
mm10_v2_chr6_+_94500313_94500353	0.0568581	Rfx5	ENSMUST00000061118.8|Slc25a26|ENSMUSG00000045100.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
mm10_v2_chr19_-_10482874_10482938	0.0553571	Rfx5	ENSMUST00000038842.3|Ppp1r32|ENSMUSG00000035179.3|protein phosphatase 1, regulatory subunit 32
mm10_v2_chr17_+_34263209_34263256	0.0541866	Rfx5	ENSMUST00000040828.5|H2-Ab1|ENSMUSG00000073421.5|histocompatibility 2, class II antigen A, beta 1
mm10_v2_chr7_-_30664986_30664999	0.049258	Rfx5	ENSMUST00000019697.8|Haus5|ENSMUSG00000078762.4|HAUS augmin-like complex, subunit 5
mm10_v2_chr10_-_7663245_7663309	0.0480763	Rfx5	ENSMUST00000163085.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 	ENSMUST00000159917.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm10_v2_chr8_-_89187560_89187560	0.0466496	Rfx5	ENSMUST00000093326.2|Gm5356|ENSMUSG00000069962.2|predicted pseudogene 5356
mm10_v2_chr2_-_128687354_128687396	0.0434065	Rfx5	ENSMUST00000110332.1|Anapc1|ENSMUSG00000014355.4|anaphase promoting complex subunit 1 	ENSMUST00000110333.1|Anapc1|ENSMUSG00000014355.4|anaphase promoting complex subunit 1 	ENSMUST00000014499.3|Anapc1|ENSMUSG00000014355.4|anaphase promoting complex subunit 1
mm10_v2_chr9_+_44772909_44772949	0.0409066	Rfx5	ENSMUST00000002099.3|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr5_+_139150211_139150249	0.0394876	Rfx5	ENSMUST00000026975.6|Heatr2|ENSMUSG00000025857.6|HEAT repeat containing 2
mm10_v2_chr7_+_46841475_46841538	0.0368239	Rfx5	ENSMUST00000147535.1|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr10_-_78307550_78307619	0.0354238	Rfx5	ENSMUST00000150828.1|Agpat3|ENSMUSG00000001211.8|1-acylglycerol-3-phosphate O-acyltransferase 3
mm10_v2_chr4_+_107968332_107968424	0.0352987	Rfx5	ENSMUST00000106713.3|Slc1a7|ENSMUSG00000008932.9|solute carrier family 1 (glutamate transporter), member 7
mm10_v2_chr2_+_163438455_163438536	0.0318459	Rfx5	ENSMUST00000109420.3|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000109421.3|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000018087.6|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000137070.1|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1
mm10_v2_chr19_-_4615647_4615700	0.0316594	Rfx5	ENSMUST00000113822.2|Lrfn4|ENSMUSG00000045045.7|leucine rich repeat and fibronectin type III domain containing 4
mm10_v2_chr8_+_94214567_94214608	0.0308359	Rfx5	ENSMUST00000079961.6|Nup93|ENSMUSG00000032939.7|nucleoporin 93
mm10_v2_chr11_+_61505138_61505210	0.0287155	Rfx5	ENSMUST00000102657.3|B9d1|ENSMUSG00000001039.6|B9 protein domain 1
mm10_v2_chr10_-_7663569_7663613	0.0272273	Rfx5	ENSMUST00000162606.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm10_v2_chr7_-_45092130_45092185	0.026409	Rfx5	ENSMUST00000148175.1|Rcn3|ENSMUSG00000019539.4|reticulocalbin 3, EF-hand calcium binding domain
mm10_v2_chr17_-_34187219_34187345	0.0250598	Rfx5	ENSMUST00000173831.1|Psmb9|ENSMUSG00000096727.1|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
mm10_v2_chr10_-_19011948_19011973	0.0213338	Rfx5	ENSMUST00000105527.1|Tnfaip3|ENSMUSG00000019850.5|tumor necrosis factor, alpha-induced protein 3
mm10_v2_chr12_+_108334341_108334406	0.0182444	Rfx5	ENSMUST00000021684.4|Cyp46a1|ENSMUSG00000021259.4|cytochrome P450, family 46, subfamily a, polypeptide 1
mm10_v2_chr5_-_36830647_36830657	0.0135308	Rfx5	ENSMUST00000031002.3|Man2b2|ENSMUSG00000029119.3|mannosidase 2, alpha B2
mm10_v2_chr10_-_127263346_127263368	0.0124481	Rfx5	ENSMUST00000099172.3|Kif5a|ENSMUSG00000074657.4|kinesin family member 5A
mm10_v2_chr6_-_83831736_83831750	0.00492457	Rfx5	ENSMUST00000058383.8|Paip2b|ENSMUSG00000045896.8|poly(A) binding protein interacting protein 2B
