mm10_v2_chr3_-_85722474_85722474	9.30317	Six3_Six1_Six2	ENSMUST00000119077.1|Fam160a1|ENSMUSG00000051000.11|family with sequence similarity 160, member A1
mm10_v2_chr13_+_94083490_94083511	6.88754	Six3_Six1_Six2	ENSMUST00000156071.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr7_-_126676357_126676383	3.57638	Six3_Six1_Six2	ENSMUST00000106371.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000106372.3|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000155419.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr15_-_75894474_75894529	3.51249	Six3_Six1_Six2	ENSMUST00000023237.6|Naprt1|ENSMUSG00000022574.6|nicotinate phosphoribosyltransferase domain containing 1
mm10_v2_chr7_-_126676428_126676439	2.64245	Six3_Six1_Six2	ENSMUST00000106373.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr5_+_139423151_139423186	2.48457	Six3_Six1_Six2	ENSMUST00000066211.4|Gper1|ENSMUSG00000053647.4|G protein-coupled estrogen receptor 1
mm10_v2_chr9_+_72958785_72958850	1.91388	Six3_Six1_Six2	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chr8_+_57455898_57455923	1.85202	Six3_Six1_Six2	ENSMUST00000034023.3|Scrg1|ENSMUSG00000031610.3|scrapie responsive gene 1
mm10_v2_chr13_+_43785107_43785160	1.83368	Six3_Six1_Six2	ENSMUST00000015540.2|Cd83|ENSMUSG00000015396.3|CD83 antigen
mm10_v2_chr6_+_48537560_48537622	1.80242	Six3_Six1_Six2	ENSMUST00000040361.5|Atp6v0e2|ENSMUSG00000039347.5|ATPase, H+ transporting, lysosomal V0 subunit E2
mm10_v2_chr4_-_32950813_32950866	1.51272	Six3_Six1_Six2	ENSMUST00000084750.1|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6 	ENSMUST00000084748.2|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6
mm10_v2_chr3_+_94398517_94398538	1.51061	Six3_Six1_Six2	ENSMUST00000050975.3|Lingo4|ENSMUSG00000044505.3|leucine rich repeat and Ig domain containing 4
mm10_v2_chr15_+_98571004_98571026	1.48874	Six3_Six1_Six2	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chrX_-_142966709_142966734	1.45006	Six3_Six1_Six2	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chrX_+_169685191_169685250	1.34656	Six3_Six1_Six2	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr2_+_106693185_106693278	1.12136	Six3_Six1_Six2	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr18_+_56432116_56432163	0.979086	Six3_Six1_Six2	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr2_+_127336152_127336166	0.974578	Six3_Six1_Six2	ENSMUST00000028846.6|Dusp2|ENSMUSG00000027368.6|dual specificity phosphatase 2
mm10_v2_chr17_-_56717681_56717709	0.721934	Six3_Six1_Six2	ENSMUST00000164907.1|Vmac|ENSMUSG00000054723.5|vimentin-type intermediate filament associated coiled-coil protein
mm10_v2_chr14_+_123659971_123660209	0.707	Six3_Six1_Six2	ENSMUST00000049681.7|Itgbl1|ENSMUSG00000032925.10|integrin, beta-like 1
mm10_v2_chr17_-_56716788_56716921	0.696073	Six3_Six1_Six2	ENSMUST00000067931.5|Vmac|ENSMUSG00000054723.5|vimentin-type intermediate filament associated coiled-coil protein
mm10_v2_chr7_+_30231884_30231948	0.678094	Six3_Six1_Six2	ENSMUST00000019882.9|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr15_+_82252397_82252475	0.628589	Six3_Six1_Six2	ENSMUST00000136948.1|1500009C09Rik|ENSMUSG00000068099.4|RIKEN cDNA 1500009C09 gene
mm10_v2_chr2_+_131491764_131491943	0.565343	Six3_Six1_Six2	ENSMUST00000028806.5|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110179.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110189.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110182.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110183.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110186.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110188.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr9_+_65141154_65141198	0.541927	Six3_Six1_Six2	ENSMUST00000034961.4|Igdcc3|ENSMUSG00000032394.5|immunoglobulin superfamily, DCC subclass, member 3
mm10_v2_chr5_-_106926245_106926321	0.505273	Six3_Six1_Six2	ENSMUST00000117588.1|Hfm1|ENSMUSG00000043410.10|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
mm10_v2_chr10_+_24595623_24595780	0.480309	Six3_Six1_Six2	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr11_-_69695521_69695713	0.44763	Six3_Six1_Six2	ENSMUST00000181261.1|Tnfsf12|ENSMUSG00000097328.1|tumor necrosis factor (ligand) superfamily, member 12
mm10_v2_chr7_-_141168671_141168936	0.425093	Six3_Six1_Six2	ENSMUST00000106033.3|Rnh1|ENSMUSG00000038650.8|ribonuclease/angiogenin inhibitor 1
mm10_v2_chr9_+_104002546_104002776	0.396023	Six3_Six1_Six2	ENSMUST00000035167.8|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent) 	ENSMUST00000117054.1|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent)
mm10_v2_chr10_+_100488289_100488289	0.363544	Six3_Six1_Six2	ENSMUST00000164751.1|Cep290|ENSMUSG00000019971.9|centrosomal protein 290
mm10_v2_chr4_+_11758147_11758220	0.346626	Six3_Six1_Six2	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr12_+_30584429_30584466	0.33335	Six3_Six1_Six2	ENSMUST00000057151.8|Tmem18|ENSMUSG00000043061.9|transmembrane protein 18
mm10_v2_chr3_+_88207308_88207328	0.329699	Six3_Six1_Six2	ENSMUST00000180582.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr2_-_13271419_13271437	0.289169	Six3_Six1_Six2	ENSMUST00000028059.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr2_-_13271268_13271348	0.26304	Six3_Six1_Six2	ENSMUST00000137670.1|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1 	ENSMUST00000114791.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr8_-_4275886_4275915	0.262745	Six3_Six1_Six2	ENSMUST00000003029.7|Timm44|ENSMUSG00000002949.8|translocase of inner mitochondrial membrane 44
mm10_v2_chr2_-_119029359_119029389	0.211126	Six3_Six1_Six2	ENSMUST00000110833.1|Ccdc32|ENSMUSG00000039983.7|coiled-coil domain containing 32
mm10_v2_chr15_-_76206309_76206357	0.209249	Six3_Six1_Six2	ENSMUST00000073418.6|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000171634.1|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000076442.5|Plec|ENSMUSG00000022565.9|plectin
mm10_v2_chr17_+_40811089_40811133	0.205536	Six3_Six1_Six2	ENSMUST00000024721.7|Rhag|ENSMUSG00000023926.7|Rhesus blood group-associated A glycoprotein
mm10_v2_chr16_-_18235074_18235184	0.189726	Six3_Six1_Six2	ENSMUST00000076957.5|Zdhhc8|ENSMUSG00000060166.5|zinc finger, DHHC domain containing 8
mm10_v2_chr17_+_25133385_25133434	0.186788	Six3_Six1_Six2	ENSMUST00000040729.2|Clcn7|ENSMUSG00000036636.3|chloride channel 7
mm10_v2_chr7_-_80115294_80115392	0.182426	Six3_Six1_Six2	ENSMUST00000107384.3|Idh2|ENSMUSG00000030541.10|isocitrate dehydrogenase 2 (NADP+), mitochondrial
mm10_v2_chr4_+_133176336_133176371	0.179498	Six3_Six1_Six2	ENSMUST00000105912.1|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2
mm10_v2_chr19_+_46341118_46341122	0.165847	Six3_Six1_Six2	ENSMUST00000128041.1|Tmem180|ENSMUSG00000025227.8|transmembrane protein 180
mm10_v2_chr2_-_119029392_119029395	0.162434	Six3_Six1_Six2	ENSMUST00000036470.7|Ccdc32|ENSMUSG00000039983.7|coiled-coil domain containing 32 	ENSMUST00000110834.1|Ccdc32|ENSMUSG00000039983.7|coiled-coil domain containing 32
mm10_v2_chr10_-_78487842_78487842	0.124278	Six3_Six1_Six2	ENSMUST00000069431.4|Gm9978|ENSMUSG00000055704.4|predicted gene 9978
mm10_v2_chr7_+_30232310_30232350	0.123217	Six3_Six1_Six2	ENSMUST00000108193.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I 	ENSMUST00000108192.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr5_-_62765618_62765656	0.120443	Six3_Six1_Six2	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr15_-_82244716_82244755	0.11583	Six3_Six1_Six2	ENSMUST00000089155.4|Cenpm|ENSMUSG00000068101.4|centromere protein M 	ENSMUST00000089157.3|Cenpm|ENSMUSG00000068101.4|centromere protein M
mm10_v2_chr5_+_21543525_21543590	0.110833	Six3_Six1_Six2	ENSMUST00000035651.4|Lrrc17|ENSMUSG00000039883.4|leucine rich repeat containing 17
mm10_v2_chr9_-_59353430_59353508	0.110748	Six3_Six1_Six2	ENSMUST00000026265.6|Bbs4|ENSMUSG00000025235.7|Bardet-Biedl syndrome 4 (human)
mm10_v2_chr7_-_100855403_100855440	0.0998787	Six3_Six1_Six2	ENSMUST00000156855.1|Relt|ENSMUSG00000008318.3|RELT tumor necrosis factor receptor
mm10_v2_chr11_-_101987004_101987013	0.0970182	Six3_Six1_Six2	ENSMUST00000107173.2|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) 	ENSMUST00000107172.1|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
mm10_v2_chr14_+_57798156_57798180	0.0927878	Six3_Six1_Six2	ENSMUST00000128764.1|Sap18|ENSMUSG00000021963.10|Sin3-associated polypeptide 18
mm10_v2_chr17_-_53539411_53539459	0.0871568	Six3_Six1_Six2	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr9_+_119341487_119341515	0.0708839	Six3_Six1_Six2	ENSMUST00000175743.1|Acaa1a|ENSMUSG00000036138.10|acetyl-Coenzyme A acyltransferase 1A 	ENSMUST00000176397.1|Acaa1a|ENSMUSG00000036138.10|acetyl-Coenzyme A acyltransferase 1A
mm10_v2_chr19_+_55316313_55316367	0.0696835	Six3_Six1_Six2	ENSMUST00000095950.2|Vti1a|ENSMUSG00000024983.9|vesicle transport through interaction with t-SNAREs 1A
mm10_v2_chr5_+_23787691_23787751	0.0538839	Six3_Six1_Six2	ENSMUST00000030852.6|Rint1|ENSMUSG00000028999.9|RAD50 interactor 1 	ENSMUST00000120869.1|Rint1|ENSMUSG00000028999.9|RAD50 interactor 1 	ENSMUST00000117783.1|Rint1|ENSMUSG00000028999.9|RAD50 interactor 1 	ENSMUST00000115113.2|Rint1|ENSMUSG00000028999.9|RAD50 interactor 1
mm10_v2_chr3_+_130068390_130068412	0.0478236	Six3_Six1_Six2	ENSMUST00000076703.6|Gm9396|ENSMUSG00000063328.6|predicted gene 9396
mm10_v2_chr5_+_104046869_104046899	0.0397987	Six3_Six1_Six2	ENSMUST00000031250.7|Nudt9|ENSMUSG00000029310.7|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm10_v2_chr8_+_71951038_71951130	0.037083	Six3_Six1_Six2	ENSMUST00000131237.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000136516.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000109997.2|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000132848.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961
mm10_v2_chr16_+_11203375_11203448	0.00604057	Six3_Six1_Six2	ENSMUST00000181526.1|2610020C07Rik|ENSMUSG00000097537.1|RIKEN cDNA 2610020C07 gene
mm10_v2_chr11_-_87826023_87826113	0.00212532	Six3_Six1_Six2	ENSMUST00000103177.3|Lpo|ENSMUSG00000009356.6|lactoperoxidase
