mm10_v2_chr11_-_33147400_33147448	1.77502	Smad4	ENSMUST00000020507.7|Fgf18|ENSMUSG00000057967.6|fibroblast growth factor 18
mm10_v2_chr1_+_153652943_153653025	1.11597	Smad4	ENSMUST00000041776.5|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr10_+_75589363_75589390	0.999166	Smad4	ENSMUST00000072217.2|Ggt5|ENSMUSG00000006344.10|gamma-glutamyltransferase 5
mm10_v2_chr7_+_101421691_101421726	0.942474	Smad4	ENSMUST00000163751.2|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000084894.7|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000166652.1|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated
mm10_v2_chr10_-_127534540_127534566	0.920097	Smad4	ENSMUST00000095266.2|Nxph4|ENSMUSG00000040258.6|neurexophilin 4
mm10_v2_chr5_+_120431770_120431905	0.855214	Smad4	ENSMUST00000031591.7|Lhx5|ENSMUSG00000029595.7|LIM homeobox protein 5
mm10_v2_chr13_-_102958084_102958173	0.830719	Smad4	ENSMUST00000099202.3|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000172264.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr14_-_104467984_104468041	0.805414	Smad4	ENSMUST00000053016.8|Pou4f1|ENSMUSG00000048349.8|POU domain, class 4, transcription factor 1
mm10_v2_chr7_-_70360593_70360746	0.745057	Smad4	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr6_+_54039935_54040039	0.725892	Smad4	ENSMUST00000114403.1|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr6_+_54040078_54040091	0.719863	Smad4	ENSMUST00000127323.2|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr15_+_89532816_89532890	0.631399	Smad4	ENSMUST00000167173.1|Shank3|ENSMUSG00000022623.9|SH3/ankyrin domain gene 3
mm10_v2_chr9_+_53771499_53771535	0.599184	Smad4	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr13_+_21735055_21735070	0.54755	Smad4	ENSMUST00000087714.4|Hist1h4j|ENSMUSG00000067455.4|histone cluster 1, H4j
mm10_v2_chr4_-_134254076_134254128	0.532634	Smad4	ENSMUST00000060050.5|Grrp1|ENSMUSG00000050105.5|glycine/arginine rich protein 1
mm10_v2_chr6_+_147032528_147032547	0.531576	Smad4	ENSMUST00000036194.4|Rep15|ENSMUSG00000040121.4|RAB15 effector protein
mm10_v2_chr10_+_80150448_80150482	0.525772	Smad4	ENSMUST00000153477.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr7_+_24862193_24862213	0.524051	Smad4	ENSMUST00000052897.4|Gm9844|ENSMUSG00000050347.5|predicted pseudogene 9844 	ENSMUST00000170837.2|Gm9844|ENSMUSG00000091955.2|predicted pseudogene 9844
mm10_v2_chr3_-_33143227_33143266	0.502037	Smad4	ENSMUST00000108219.1|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr11_-_89302545_89302567	0.499108	Smad4	ENSMUST00000061728.3|Nog|ENSMUSG00000048616.3|noggin
mm10_v2_chr10_-_92164666_92164754	0.49059	Smad4	ENSMUST00000183123.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000182033.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr14_+_12189943_12190001	0.486956	Smad4	ENSMUST00000119888.1|Ptprg|ENSMUSG00000021745.7|protein tyrosine phosphatase, receptor type, G
mm10_v2_chr6_+_54039558_54039575	0.471305	Smad4	ENSMUST00000046856.7|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chrX_+_151803642_151803673	0.464563	Smad4	ENSMUST00000156616.2|Huwe1|ENSMUSG00000025261.11|HECT, UBA and WWE domain containing 1
mm10_v2_chr17_+_72918298_72918316	0.443569	Smad4	ENSMUST00000024857.6|Lbh|ENSMUSG00000024063.6|limb-bud and heart
mm10_v2_chr13_-_22042949_22042978	0.436884	Smad4	ENSMUST00000091741.4|Hist1h2ag|ENSMUSG00000069301.4|histone cluster 1, H2ag
mm10_v2_chr17_-_28486082_28486149	0.429527	Smad4	ENSMUST00000079413.3|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr5_+_75574916_75575001	0.415817	Smad4	ENSMUST00000144270.1|Kit|ENSMUSG00000005672.6|kit oncogene 	ENSMUST00000005815.6|Kit|ENSMUSG00000005672.6|kit oncogene
mm10_v2_chr5_+_92683625_92683648	0.410835	Smad4	ENSMUST00000168878.1|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr7_+_117380937_117380992	0.40835	Smad4	ENSMUST00000032892.5|Xylt1|ENSMUSG00000030657.5|xylosyltransferase 1
mm10_v2_chr2_+_27676440_27676454	0.396956	Smad4	ENSMUST00000129514.1|Rxra|ENSMUSG00000015846.8|retinoid X receptor alpha
mm10_v2_chr11_-_95514570_95514707	0.394038	Smad4	ENSMUST00000058866.7|Nxph3|ENSMUSG00000046719.7|neurexophilin 3
mm10_v2_chr13_-_98890974_98891035	0.393438	Smad4	ENSMUST00000179301.1|Tnpo1|ENSMUSG00000009470.10|transportin 1 	ENSMUST00000179271.1|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr6_-_138422898_138422999	0.381589	Smad4	ENSMUST00000161450.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000163024.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000162185.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr5_-_137741102_137741185	0.37004	Smad4	ENSMUST00000149512.1|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
mm10_v2_chrX_+_136270253_136270269	0.369717	Smad4	ENSMUST00000178632.1|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENSMUST00000053540.4|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1
mm10_v2_chr4_-_117178726_117178754	0.369651	Smad4	ENSMUST00000153953.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C 	ENSMUST00000106436.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr9_-_45936049_45936106	0.367173	Smad4	ENSMUST00000034590.2|Tagln|ENSMUSG00000032085.4|transgelin
mm10_v2_chr9_-_14381242_14381242	0.36565	Smad4	ENSMUST00000167549.1|Endod1|ENSMUSG00000037419.8|endonuclease domain containing 1
mm10_v2_chr7_-_45052865_45052914	0.351682	Smad4	ENSMUST00000057293.6|Prr12|ENSMUSG00000046574.7|proline rich 12
mm10_v2_chr3_-_96220880_96220899	0.341896	Smad4	ENSMUST00000090782.3|Hist2h2ac|ENSMUSG00000068855.3|histone cluster 2, H2ac
mm10_v2_chrX_+_136270302_136270352	0.336336	Smad4	ENSMUST00000113112.1|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1
mm10_v2_chr15_+_39076885_39076938	0.336092	Smad4	ENSMUST00000067072.3|Cthrc1|ENSMUSG00000054196.6|collagen triple helix repeat containing 1
mm10_v2_chr6_-_72958097_72958302	0.330918	Smad4	ENSMUST00000114049.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr1_+_187997821_187997834	0.325573	Smad4	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr2_+_120476911_120476976	0.319524	Smad4	ENSMUST00000110716.1|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000028748.6|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000090028.5|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000110719.2|Capn3|ENSMUSG00000079110.5|calpain 3
mm10_v2_chr15_-_38300693_38300715	0.316025	Smad4	ENSMUST00000074043.5|Klf10|ENSMUSG00000037465.9|Kruppel-like factor 10
mm10_v2_chr17_-_70851710_70851738	0.315636	Smad4	ENSMUST00000166395.2|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr1_+_187997835_187997882	0.31456	Smad4	ENSMUST00000110938.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr2_+_3114220_3114225	0.310548	Smad4	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr11_+_60699718_60699750	0.305945	Smad4	ENSMUST00000052346.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr14_-_54577578_54577661	0.298353	Smad4	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr1_-_16770138_16770159	0.292991	Smad4	ENSMUST00000071842.8|Gm5828|ENSMUSG00000091020.2|predicted gene 5828
mm10_v2_chr8_-_34146974_34147033	0.275581	Smad4	ENSMUST00000033910.8|Leprotl1|ENSMUSG00000031513.8|leptin receptor overlapping transcript-like 1
mm10_v2_chrX_+_99136119_99136138	0.272718	Smad4	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr6_+_108660772_108660874	0.269462	Smad4	ENSMUST00000163617.1|Bhlhe40|ENSMUSG00000030103.5|basic helix-loop-helix family, member e40
mm10_v2_chr11_+_60699758_60699845	0.26121	Smad4	ENSMUST00000108719.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr13_-_21832194_21832198	0.25659	Smad4	ENSMUST00000102979.1|Hist1h4n|ENSMUSG00000069305.3|histone cluster 1, H4n
mm10_v2_chr19_-_40271506_40271616	0.250632	Smad4	ENSMUST00000068439.6|Pdlim1|ENSMUSG00000055044.6|PDZ and LIM domain 1 (elfin)
mm10_v2_chr11_-_3504766_3504833	0.248448	Smad4	ENSMUST00000044507.5|Inpp5j|ENSMUSG00000034570.6|inositol polyphosphate 5-phosphatase J
mm10_v2_chr6_-_72958465_72958496	0.246015	Smad4	ENSMUST00000114050.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr19_-_31664356_31664372	0.24227	Smad4	ENSMUST00000073581.5|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr16_-_55283237_55283287	0.239511	Smad4	ENSMUST00000036412.3|Zpld1|ENSMUSG00000064310.4|zona pellucida like domain containing 1
mm10_v2_chr12_-_109600328_109600348	0.237071	Smad4	ENSMUST00000149046.2|Rtl1|ENSMUSG00000085925.2|retrotransposon-like 1
mm10_v2_chr4_+_128688726_128688795	0.233901	Smad4	ENSMUST00000106080.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr5_+_7179299_7179365	0.230517	Smad4	ENSMUST00000179460.1|Tubb4b-ps1|ENSMUSG00000095159.1|tubulin, beta 4B class IVB, pseudogene 1
mm10_v2_chrX_+_150588223_150588260	0.229197	Smad4	ENSMUST00000153221.1|Pfkfb1|ENSMUSG00000025271.7|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm10_v2_chr7_+_141216626_141216700	0.228025	Smad4	ENSMUST00000141804.1|Rassf7|ENSMUSG00000038618.5|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 	ENSMUST00000148975.1|Rassf7|ENSMUSG00000038618.5|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
mm10_v2_chr11_-_69413675_69413675	0.227555	Smad4	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chr8_+_45658273_45658298	0.225836	Smad4	ENSMUST00000153798.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chrX_-_136741155_136741352	0.225412	Smad4	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr4_-_134245579_134245604	0.224123	Smad4	ENSMUST00000030644.7|Zfp593|ENSMUSG00000028840.10|zinc finger protein 593
mm10_v2_chr9_-_21852603_21852644	0.222834	Smad4	ENSMUST00000034728.7|Dock6|ENSMUSG00000032198.8|dedicator of cytokinesis 6
mm10_v2_chr4_+_42950369_42950445	0.22065	Smad4	ENSMUST00000084662.5|Dnajb5|ENSMUSG00000036052.8|DnaJ (Hsp40) homolog, subfamily B, member 5
mm10_v2_chr8_-_109251698_109251728	0.218648	Smad4	ENSMUST00000079189.3|4922502B01Rik|ENSMUSG00000057387.3|RIKEN cDNA 4922502B01 gene
mm10_v2_chrX_+_151803313_151803376	0.217143	Smad4	ENSMUST00000026292.8|Huwe1|ENSMUSG00000025261.11|HECT, UBA and WWE domain containing 1
mm10_v2_chr7_+_45785331_45785390	0.213884	Smad4	ENSMUST00000120005.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000123585.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr1_-_64121389_64121452	0.213612	Smad4	ENSMUST00000055001.3|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr17_+_24352037_24352149	0.213452	Smad4	ENSMUST00000079594.5|Abca3|ENSMUSG00000024130.9|ATP-binding cassette, sub-family A (ABC1), member 3
mm10_v2_chr14_+_64950037_64950056	0.210393	Smad4	ENSMUST00000043914.5|Ints9|ENSMUSG00000021975.7|integrator complex subunit 9
mm10_v2_chr13_-_115090123_115090241	0.208651	Smad4	ENSMUST00000109226.3|Pelo|ENSMUSG00000042275.8|pelota homolog (Drosophila)
mm10_v2_chr19_+_4097392_4097415	0.201525	Smad4	ENSMUST00000174514.1|Cdk2ap2|ENSMUSG00000024856.4|CDK2-associated protein 2 	ENSMUST00000174149.1|Cdk2ap2|ENSMUSG00000024856.4|CDK2-associated protein 2
mm10_v2_chr9_-_49798905_49798931	0.200495	Smad4	ENSMUST00000114476.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr7_-_126897424_126897483	0.197171	Smad4	ENSMUST00000120007.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr10_-_91082704_91082773	0.196825	Smad4	ENSMUST00000162618.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1 	ENSMUST00000020157.6|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1 	ENSMUST00000160788.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1
mm10_v2_chr17_-_35162969_35163040	0.194256	Smad4	ENSMUST00000174805.1|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr14_+_50944499_50944514	0.193324	Smad4	ENSMUST00000178092.1|Pnp|ENSMUSG00000021871.11|purine-nucleoside phosphorylase
mm10_v2_chr6_-_83775767_83775826	0.190834	Smad4	ENSMUST00000014892.6|Tex261|ENSMUSG00000014748.7|testis expressed gene 261
mm10_v2_chr11_-_106160101_106160168	0.189428	Smad4	ENSMUST00000045923.3|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chrX_-_150588071_150588153	0.187512	Smad4	ENSMUST00000140207.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112719.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112727.3|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112721.3|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000026303.9|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2
mm10_v2_chr10_+_80300997_80301050	0.187199	Smad4	ENSMUST00000140828.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2 	ENSMUST00000138909.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr1_-_54194048_54194048	0.180364	Smad4	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr8_-_41016749_41016769	0.179378	Smad4	ENSMUST00000117735.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr13_+_23531044_23531088	0.177891	Smad4	ENSMUST00000102972.3|Hist1h4h|ENSMUSG00000060981.5|histone cluster 1, H4h
mm10_v2_chr13_-_23551648_23551672	0.175585	Smad4	ENSMUST00000102971.1|Hist1h4f|ENSMUSG00000069274.3|histone cluster 1, H4f
mm10_v2_chr19_-_5295397_5295455	0.174627	Smad4	ENSMUST00000025774.9|Sf3b2|ENSMUSG00000024853.9|splicing factor 3b, subunit 2
mm10_v2_chr15_-_27681498_27681554	0.174001	Smad4	ENSMUST00000100739.3|Fam105a|ENSMUSG00000056069.8|family with sequence similarity 105, member A
mm10_v2_chr7_-_30362772_30362772	0.173627	Smad4	ENSMUST00000046351.5|Lrfn3|ENSMUSG00000036957.7|leucine rich repeat and fibronectin type III domain containing 3
mm10_v2_chr11_-_106160708_106160860	0.168368	Smad4	ENSMUST00000106875.1|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr7_+_83755904_83755956	0.167373	Smad4	ENSMUST00000051522.8|Gm7964|ENSMUSG00000063902.6|predicted gene 7964 	ENSMUST00000042280.7|Gm7964|ENSMUSG00000063902.6|predicted gene 7964
mm10_v2_chr11_-_106159902_106159927	0.164934	Smad4	ENSMUST00000064545.4|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr4_+_117835387_117835428	0.157975	Smad4	ENSMUST00000169885.1|Slc6a9|ENSMUSG00000028542.11|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
mm10_v2_chr14_+_57826210_57826272	0.15639	Smad4	ENSMUST00000022538.3|Mrp63|ENSMUSG00000021967.3|mitochondrial ribosomal protein 63
mm10_v2_chr7_+_45216671_45216695	0.154609	Smad4	ENSMUST00000134420.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr9_+_96895617_96895617	0.151738	Smad4	ENSMUST00000071781.6|Gm10123|ENSMUSG00000062933.6|predicted pseudogene 10123
mm10_v2_chrX_-_72274747_72274803	0.150529	Smad4	ENSMUST00000064780.3|Gabre|ENSMUSG00000031340.8|gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
mm10_v2_chr12_+_103314944_103314962	0.15043	Smad4	ENSMUST00000179363.1|Fam181a|ENSMUSG00000096753.1|family with sequence similarity 181, member A
mm10_v2_chr7_+_45215753_45215852	0.149872	Smad4	ENSMUST00000033060.6|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000155313.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000107801.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr6_-_30693676_30693749	0.148049	Smad4	ENSMUST00000169422.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115131.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115130.2|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000031810.8|Cep41|ENSMUSG00000029790.10|centrosomal protein 41
mm10_v2_chr2_+_27079371_27079385	0.14526	Smad4	ENSMUST00000091233.6|Adamtsl2|ENSMUSG00000036040.8|ADAMTS-like 2
mm10_v2_chr5_+_30913398_30913403	0.136245	Smad4	ENSMUST00000031055.5|Emilin1|ENSMUSG00000029163.7|elastin microfibril interfacer 1
mm10_v2_chrX_+_56779437_56779565	0.135396	Smad4	ENSMUST00000114773.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr2_+_32628390_32628415	0.125635	Smad4	ENSMUST00000156578.1|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr7_+_141949846_141949868	0.124125	Smad4	ENSMUST00000172652.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr2_-_93046053_93046172	0.121522	Smad4	ENSMUST00000111272.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000178666.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000147339.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11
mm10_v2_chr19_+_46328179_46328205	0.12115	Smad4	ENSMUST00000026256.2|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15 	ENSMUST00000177667.1|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15
mm10_v2_chr9_+_106429537_106429548	0.120082	Smad4	ENSMUST00000059802.6|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chr9_-_57552760_57552771	0.114096	Smad4	ENSMUST00000034856.8|Mpi|ENSMUSG00000032306.8|mannose phosphate isomerase
mm10_v2_chr8_-_92356103_92356120	0.112377	Smad4	ENSMUST00000034183.3|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene
mm10_v2_chr1_-_173367638_173367695	0.111878	Smad4	ENSMUST00000005470.4|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3 	ENSMUST00000111220.1|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3
mm10_v2_chr9_+_61373608_61373672	0.110403	Smad4	ENSMUST00000161689.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr5_+_121795034_121795034	0.108581	Smad4	ENSMUST00000162327.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr3_-_146839365_146839367	0.1082	Smad4	ENSMUST00000084614.3|Gm10288|ENSMUSG00000070343.2|predicted gene 10288
mm10_v2_chr9_+_21424984_21425244	0.107964	Smad4	ENSMUST00000172482.1|Dnm2|ENSMUSG00000033335.11|dynamin 2 	ENSMUST00000174050.1|Dnm2|ENSMUSG00000033335.11|dynamin 2
mm10_v2_chr7_+_127485221_127485221	0.107802	Smad4	ENSMUST00000048896.6|Fbrs|ENSMUSG00000042423.7|fibrosin
mm10_v2_chr3_+_68572245_68572392	0.105102	Smad4	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr11_+_4160348_4160404	0.104432	Smad4	ENSMUST00000002198.3|Sf3a1|ENSMUSG00000002129.5|splicing factor 3a, subunit 1
mm10_v2_chr4_+_126677630_126677646	0.103742	Smad4	ENSMUST00000030642.2|Psmb2|ENSMUSG00000028837.2|proteasome (prosome, macropain) subunit, beta type 2
mm10_v2_chr3_+_88607742_88607791	0.102394	Smad4	ENSMUST00000175903.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr9_-_49798729_49798855	0.101465	Smad4	ENSMUST00000166811.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr9_+_61373482_61373535	0.0990826	Smad4	ENSMUST00000160541.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000161207.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159630.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr4_-_129742275_129742312	0.0988482	Smad4	ENSMUST00000066257.5|Khdrbs1|ENSMUSG00000028790.7|KH domain containing, RNA binding, signal transduction associated 1
mm10_v2_chr17_+_46646225_46646272	0.0981801	Smad4	ENSMUST00000002844.7|Mrpl2|ENSMUSG00000002767.7|mitochondrial ribosomal protein L2 	ENSMUST00000113429.1|Mrpl2|ENSMUSG00000002767.7|mitochondrial ribosomal protein L2 	ENSMUST00000113430.1|Mrpl2|ENSMUSG00000002767.7|mitochondrial ribosomal protein L2
mm10_v2_chr12_+_13269111_13269154	0.0973646	Smad4	ENSMUST00000042953.8|Nbas|ENSMUSG00000020576.9|neuroblastoma amplified sequence
mm10_v2_chr11_-_5261558_5261637	0.0961208	Smad4	ENSMUST00000020662.8|Kremen1|ENSMUSG00000020393.10|kringle containing transmembrane protein 1
mm10_v2_chr9_+_122888471_122888471	0.0955184	Smad4	ENSMUST00000063980.6|Zkscan7|ENSMUSG00000063488.5|zinc finger with KRAB and SCAN domains 7
mm10_v2_chr14_-_54554359_54554370	0.0900263	Smad4	ENSMUST00000022784.8|Haus4|ENSMUSG00000022177.8|HAUS augmin-like complex, subunit 4
mm10_v2_chr13_+_22043189_22043214	0.0895939	Smad4	ENSMUST00000110452.1|Hist1h2bj|ENSMUSG00000069300.3|histone cluster 1, H2bj
mm10_v2_chr9_-_20898592_20898631	0.0885387	Smad4	ENSMUST00000004206.8|Eif3g|ENSMUSG00000070319.5|eukaryotic translation initiation factor 3, subunit G
mm10_v2_chr2_+_119547697_119547762	0.0824398	Smad4	ENSMUST00000014221.6|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1 	ENSMUST00000119172.1|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1
mm10_v2_chr14_-_18331855_18331862	0.0823505	Smad4	ENSMUST00000022296.6|Ube2e1|ENSMUSG00000021774.6|ubiquitin-conjugating enzyme E2E 1
mm10_v2_chr10_+_127739516_127739592	0.0791805	Smad4	ENSMUST00000054287.7|Zbtb39|ENSMUSG00000044617.7|zinc finger and BTB domain containing 39
mm10_v2_chr9_+_59589288_59589353	0.0769098	Smad4	ENSMUST00000121266.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000118164.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr4_-_95052170_95052181	0.0753898	Smad4	ENSMUST00000058555.2|Jun|ENSMUSG00000052684.3|Jun oncogene
mm10_v2_chr10_-_91082653_91082662	0.075368	Smad4	ENSMUST00000159110.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1
mm10_v2_chr3_+_127633134_127633140	0.0744535	Smad4	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chr5_-_123684289_123684379	0.0716634	Smad4	ENSMUST00000111564.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1 	ENSMUST00000063905.5|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chrX_-_7898950_7899000	0.0704288	Smad4	ENSMUST00000115655.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1 	ENSMUST00000156741.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr9_-_105521147_105521265	0.0688961	Smad4	ENSMUST00000176770.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000085133.6|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr3_+_36552600_36552677	0.0646471	Smad4	ENSMUST00000029269.5|Exosc9|ENSMUSG00000027714.5|exosome component 9 	ENSMUST00000136890.1|Exosc9|ENSMUSG00000027714.5|exosome component 9
mm10_v2_chr11_-_115419917_115419962	0.0595673	Smad4	ENSMUST00000106537.1|Atp5h|ENSMUSG00000034566.4|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d 	ENSMUST00000043931.2|Atp5h|ENSMUSG00000034566.4|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d 	ENSMUST00000073791.3|Atp5h|ENSMUSG00000034566.4|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d
mm10_v2_chr1_+_152399824_152399881	0.0591243	Smad4	ENSMUST00000044311.8|Colgalt2|ENSMUSG00000032649.8|collagen beta(1-O)galactosyltransferase 2
mm10_v2_chr2_+_70562854_70562899	0.0577502	Smad4	ENSMUST00000130998.1|Gad1|ENSMUSG00000070880.4|glutamate decarboxylase 1
mm10_v2_chr18_-_84086379_84086404	0.0557796	Smad4	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr5_-_24445166_24445220	0.0554075	Smad4	ENSMUST00000115043.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase 	ENSMUST00000115041.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr7_+_4690760_4690928	0.0552524	Smad4	ENSMUST00000048248.7|Brsk1|ENSMUSG00000035390.10|BR serine/threonine kinase 1
mm10_v2_chr9_+_61373219_61373438	0.0551797	Smad4	ENSMUST00000162583.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000161993.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000160882.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000160724.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000162973.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159050.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr19_-_8818924_8819008	0.0550877	Smad4	ENSMUST00000153281.1|Ttc9c|ENSMUSG00000071660.4|tetratricopeptide repeat domain 9C
mm10_v2_chrX_-_7898864_7898912	0.0530562	Smad4	ENSMUST00000154552.1|Pqbp1|ENSMUSG00000031157.4|polyglutamine binding protein 1
mm10_v2_chr13_-_98891036_98891063	0.0515379	Smad4	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr15_-_98728120_98728198	0.0497698	Smad4	ENSMUST00000003445.6|Fkbp11|ENSMUSG00000003355.6|FK506 binding protein 11
mm10_v2_chr6_+_116650674_116650690	0.0496243	Smad4	ENSMUST00000067354.5|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene 	ENSMUST00000178241.1|8430408G22Rik|ENSMUSG00000048489.7|RIKEN cDNA 8430408G22 gene
mm10_v2_chr4_+_97772734_97772848	0.0493093	Smad4	ENSMUST00000152023.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr2_+_152226839_152226908	0.048814	Smad4	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr12_-_36156781_36156825	0.0484916	Smad4	ENSMUST00000020856.4|Bzw2|ENSMUSG00000020547.4|basic leucine zipper and W2 domains 2
mm10_v2_chr5_-_24445254_24445287	0.0482083	Smad4	ENSMUST00000030800.6|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr4_+_116221590_116221618	0.048003	Smad4	ENSMUST00000147292.1|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr4_+_130055010_130055047	0.0457823	Smad4	ENSMUST00000123617.1|Col16a1|ENSMUSG00000040690.9|collagen, type XVI, alpha 1
mm10_v2_chr14_-_64949632_64949674	0.0451441	Smad4	ENSMUST00000176832.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr5_+_111417263_111417442	0.0444084	Smad4	ENSMUST00000094463.4|Mn1|ENSMUSG00000070576.4|meningioma 1
mm10_v2_chr3_+_96221111_96221134	0.0433952	Smad4	ENSMUST00000090781.6|Hist2h2be|ENSMUSG00000068854.6|histone cluster 2, H2be
mm10_v2_chr14_-_31168587_31168641	0.042673	Smad4	ENSMUST00000036618.7|Stab1|ENSMUSG00000042286.7|stabilin 1
mm10_v2_chr11_+_115420059_115420128	0.0424921	Smad4	ENSMUST00000103035.3|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2
mm10_v2_chr7_+_141949982_141950086	0.0423898	Smad4	ENSMUST00000105989.2|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000075528.5|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000174499.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr18_+_60526194_60526234	0.041414	Smad4	ENSMUST00000025505.5|Dctn4|ENSMUSG00000024603.7|dynactin 4
mm10_v2_chr19_-_23448322_23448350	0.0407261	Smad4	ENSMUST00000036069.6|Mamdc2|ENSMUSG00000033207.6|MAM domain containing 2
mm10_v2_chr4_+_127172866_127172898	0.0399418	Smad4	ENSMUST00000106094.2|Dlgap3|ENSMUSG00000042388.8|discs, large (Drosophila) homolog-associated protein 3
mm10_v2_chr4_+_116221689_116221698	0.0369554	Smad4	ENSMUST00000106490.2|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr10_+_33905015_33905111	0.0357557	Smad4	ENSMUST00000169670.1|Rsph4a|ENSMUSG00000039552.7|radial spoke head 4 homolog A (Chlamydomonas)
mm10_v2_chr11_+_4637734_4637789	0.0306325	Smad4	ENSMUST00000109930.2|Ascc2|ENSMUSG00000020412.10|activating signal cointegrator 1 complex subunit 2 	ENSMUST00000070257.7|Ascc2|ENSMUSG00000020412.10|activating signal cointegrator 1 complex subunit 2
mm10_v2_chr2_+_127247908_127247997	0.024141	Smad4	ENSMUST00000035871.8|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174503.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174288.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127
mm10_v2_chr8_+_95825353_95825354	0.0233024	Smad4	ENSMUST00000074053.4|Gm10094|ENSMUSG00000061104.4|predicted gene 10094
mm10_v2_chr15_+_81936911_81936982	0.0209659	Smad4	ENSMUST00000135663.1|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr7_+_123377982_123378086	0.0181783	Smad4	ENSMUST00000033025.5|Lcmt1|ENSMUSG00000030763.6|leucine carboxyl methyltransferase 1
mm10_v2_chr12_-_12941827_12941914	0.0153672	Smad4	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr15_-_93336800_93336852	0.0142496	Smad4	ENSMUST00000080299.6|Yaf2|ENSMUSG00000022634.9|YY1 associated factor 2
mm10_v2_chr1_-_74588117_74588145	0.0123441	Smad4	ENSMUST00000066986.6|Zfp142|ENSMUSG00000026135.11|zinc finger protein 142
mm10_v2_chr16_+_34784917_34784935	0.0114027	Smad4	ENSMUST00000023538.8|Mylk|ENSMUSG00000022836.10|myosin, light polypeptide kinase
mm10_v2_chr10_+_91082940_91083028	0.0110586	Smad4	ENSMUST00000020150.3|Ikbip|ENSMUSG00000019975.5|IKBKB interacting protein
mm10_v2_chr11_-_102319093_102319105	0.0105243	Smad4	ENSMUST00000174302.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000178839.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000006754.7|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chr15_-_103366763_103366798	0.0104039	Smad4	ENSMUST00000023128.6|Itga5|ENSMUSG00000000555.6|integrin alpha 5 (fibronectin receptor alpha)
mm10_v2_chr17_+_34263209_34263256	0.00489537	Smad4	ENSMUST00000040828.5|H2-Ab1|ENSMUSG00000073421.5|histocompatibility 2, class II antigen A, beta 1
mm10_v2_chr12_+_76404168_76404264	0.00218485	Smad4	ENSMUST00000080449.5|Hspa2|ENSMUSG00000059970.6|heat shock protein 2
