mm10_v2_chr8_-_84773381_84773427	4.00087	Sox6_Sox9	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr13_-_97747399_97747414	3.3208	Sox6_Sox9	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr11_-_106715251_106715394	3.17133	Sox6_Sox9	ENSMUST00000080853.4|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000183610.1|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000103069.3|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1 	ENSMUST00000106796.2|Pecam1|ENSMUSG00000020717.13|platelet/endothelial cell adhesion molecule 1
mm10_v2_chr13_-_97747373_97747384	3.02723	Sox6_Sox9	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr5_+_66968416_66968447	2.6597	Sox6_Sox9	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr5_+_66968559_66968577	2.47596	Sox6_Sox9	ENSMUST00000127184.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr6_+_17463749_17463809	2.36504	Sox6_Sox9	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr1_-_155146755_155146789	2.32177	Sox6_Sox9	ENSMUST00000027744.8|Mr1|ENSMUSG00000026471.8|major histocompatibility complex, class I-related
mm10_v2_chr9_-_79718631_79718678	2.21661	Sox6_Sox9	ENSMUST00000180083.1|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr5_+_3344194_3344312	2.15238	Sox6_Sox9	ENSMUST00000042410.4|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr9_-_79718518_79718592	2.0723	Sox6_Sox9	ENSMUST00000071750.6|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr9_-_79718720_79718752	1.93735	Sox6_Sox9	ENSMUST00000121227.1|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr7_+_96210107_96210183	1.89059	Sox6_Sox9	ENSMUST00000138760.1|Tenm4|ENSMUSG00000048078.10|teneurin transmembrane protein 4
mm10_v2_chr3_-_116129615_116129688	1.8308	Sox6_Sox9	ENSMUST00000029574.8|Vcam1|ENSMUSG00000027962.10|vascular cell adhesion molecule 1
mm10_v2_chr8_-_11312731_11312826	1.82442	Sox6_Sox9	ENSMUST00000033898.9|Col4a1|ENSMUSG00000031502.9|collagen, type IV, alpha 1
mm10_v2_chr2_+_180598219_180598226	1.79471	Sox6_Sox9	ENSMUST00000103059.1|Col9a3|ENSMUSG00000027570.9|collagen, type IX, alpha 3
mm10_v2_chr12_+_29528382_29528468	1.79226	Sox6_Sox9	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr5_+_3343893_3343945	1.78287	Sox6_Sox9	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr2_-_33942111_33942151	1.71988	Sox6_Sox9	ENSMUST00000130988.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000127936.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000134271.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403
mm10_v2_chr1_-_56972437_56972502	1.70374	Sox6_Sox9	ENSMUST00000042857.7|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr6_+_86404336_86404473	1.67935	Sox6_Sox9	ENSMUST00000113713.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000113708.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr8_+_25518757_25518772	1.66147	Sox6_Sox9	ENSMUST00000178276.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1 	ENSMUST00000179592.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1
mm10_v2_chr8_+_25518783_25518801	1.64554	Sox6_Sox9	ENSMUST00000084027.5|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1 	ENSMUST00000117179.2|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1
mm10_v2_chr6_+_65671590_65671618	1.63059	Sox6_Sox9	ENSMUST00000054351.4|Ndnf|ENSMUSG00000049001.4|neuron-derived neurotrophic factor
mm10_v2_chr6_+_86404219_86404240	1.61997	Sox6_Sox9	ENSMUST00000095754.3|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000095753.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr6_+_86404257_86404319	1.60044	Sox6_Sox9	ENSMUST00000095752.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000130967.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr14_-_118052235_118052253	1.59803	Sox6_Sox9	ENSMUST00000022725.2|Dct|ENSMUSG00000022129.3|dopachrome tautomerase
mm10_v2_chr15_-_91049823_91049948	1.53229	Sox6_Sox9	ENSMUST00000088614.5|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000100304.4|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000067205.8|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109288.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109287.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A
mm10_v2_chr13_-_41358990_41359006	1.4793	Sox6_Sox9	ENSMUST00000163623.1|Nedd9|ENSMUSG00000021365.8|neural precursor cell expressed, developmentally down-regulated gene 9
mm10_v2_chr11_-_114795888_114795903	1.43188	Sox6_Sox9	ENSMUST00000000206.3|Btbd17|ENSMUSG00000000202.3|BTB (POZ) domain containing 17
mm10_v2_chr9_+_27790947_27790991	1.42753	Sox6_Sox9	ENSMUST00000115243.2|Opcml|ENSMUSG00000062257.6|opioid binding protein/cell adhesion molecule-like
mm10_v2_chr12_-_34528844_34528904	1.40955	Sox6_Sox9	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr2_+_4400958_4400975	1.38514	Sox6_Sox9	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr18_+_37484955_37485028	1.33327	Sox6_Sox9	ENSMUST00000053856.4|Pcdhb17|ENSMUSG00000046387.4|protocadherin beta 17
mm10_v2_chr12_+_119945957_119946133	1.30944	Sox6_Sox9	ENSMUST00000058644.8|Tmem196|ENSMUSG00000048004.8|transmembrane protein 196
mm10_v2_chr3_+_34649987_34650005	1.2981	Sox6_Sox9	ENSMUST00000099151.2|Sox2|ENSMUSG00000074637.4|SRY-box containing gene 2
mm10_v2_chr7_-_103813913_103813996	1.29215	Sox6_Sox9	ENSMUST00000098192.3|Hbb-bt|ENSMUSG00000073940.3|hemoglobin, beta adult t chain
mm10_v2_chr15_+_25622525_25622558	1.27514	Sox6_Sox9	ENSMUST00000110457.1|Myo10|ENSMUSG00000022272.11|myosin X 	ENSMUST00000137601.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr6_+_17463826_17463829	1.24569	Sox6_Sox9	ENSMUST00000140070.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr2_+_25180737_25180764	1.19929	Sox6_Sox9	ENSMUST00000104999.2|Nrarp|ENSMUSG00000078202.2|Notch-regulated ankyrin repeat protein
mm10_v2_chr2_-_160367057_160367073	1.14057	Sox6_Sox9	ENSMUST00000099126.3|Mafb|ENSMUSG00000074622.3|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm10_v2_chr12_-_119238794_119238863	1.1373	Sox6_Sox9	ENSMUST00000026360.8|Itgb8|ENSMUSG00000025321.8|integrin beta 8
mm10_v2_chr1_-_119837613_119837673	1.1354	Sox6_Sox9	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr17_-_68004075_68004140	1.13305	Sox6_Sox9	ENSMUST00000024840.5|Arhgap28|ENSMUSG00000024043.7|Rho GTPase activating protein 28
mm10_v2_chr18_-_23038656_23038676	1.12087	Sox6_Sox9	ENSMUST00000081423.6|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr10_-_17947997_17948098	1.07138	Sox6_Sox9	ENSMUST00000037879.6|Heca|ENSMUSG00000039879.8|headcase homolog (Drosophila)
mm10_v2_chr15_+_83779975_83779988	1.057	Sox6_Sox9	ENSMUST00000163723.1|Mpped1|ENSMUSG00000041708.6|metallophosphoesterase domain containing 1
mm10_v2_chr16_+_23226014_23226077	1.04166	Sox6_Sox9	ENSMUST00000178797.1|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr16_+_4036942_4037103	1.02517	Sox6_Sox9	ENSMUST00000137748.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000006136.4|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000157044.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000120009.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I
mm10_v2_chr1_+_59482133_59482179	1.02184	Sox6_Sox9	ENSMUST00000114246.2|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila) 	ENSMUST00000037105.6|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila)
mm10_v2_chr2_+_146221921_146221921	1.01879	Sox6_Sox9	ENSMUST00000089257.4|Insm1|ENSMUSG00000068154.4|insulinoma-associated 1
mm10_v2_chr16_-_23988852_23988852	1.00549	Sox6_Sox9	ENSMUST00000023151.5|Bcl6|ENSMUSG00000022508.5|B cell leukemia/lymphoma 6
mm10_v2_chr8_+_11312805_11312887	0.997757	Sox6_Sox9	ENSMUST00000033899.7|Col4a2|ENSMUSG00000031503.7|collagen, type IV, alpha 2
mm10_v2_chr10_-_30655859_30655868	0.996253	Sox6_Sox9	ENSMUST00000092610.4|Ncoa7|ENSMUSG00000039697.9|nuclear receptor coactivator 7
mm10_v2_chr9_-_72111651_72111712	0.995691	Sox6_Sox9	ENSMUST00000185117.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr1_-_119837338_119837386	0.99115	Sox6_Sox9	ENSMUST00000163435.1|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr10_-_83534130_83534141	0.963718	Sox6_Sox9	ENSMUST00000020497.7|Aldh1l2|ENSMUSG00000020256.8|aldehyde dehydrogenase 1 family, member L2
mm10_v2_chr2_-_36104060_36104073	0.939911	Sox6_Sox9	ENSMUST00000112961.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6 	ENSMUST00000112966.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6
mm10_v2_chr1_-_119836999_119837139	0.923455	Sox6_Sox9	ENSMUST00000163621.1|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4 	ENSMUST00000168303.1|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr18_-_43059418_43059471	0.916955	Sox6_Sox9	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr12_-_40445754_40445798	0.898544	Sox6_Sox9	ENSMUST00000069692.8|Zfp277|ENSMUSG00000055917.8|zinc finger protein 277 	ENSMUST00000069637.7|Zfp277|ENSMUSG00000055917.8|zinc finger protein 277
mm10_v2_chr7_-_46179929_46180033	0.872233	Sox6_Sox9	ENSMUST00000033123.6|Abcc8|ENSMUSG00000040136.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
mm10_v2_chr7_-_142666816_142666842	0.868632	Sox6_Sox9	ENSMUST00000105935.1|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr4_-_82705735_82705754	0.865676	Sox6_Sox9	ENSMUST00000155821.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr18_+_37307445_37307462	0.865308	Sox6_Sox9	ENSMUST00000056712.2|Pcdhb4|ENSMUSG00000045689.2|protocadherin beta 4
mm10_v2_chr5_+_3928033_3928178	0.858589	Sox6_Sox9	ENSMUST00000143365.1|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr18_+_37477768_37477835	0.851365	Sox6_Sox9	ENSMUST00000051442.5|Pcdhb16|ENSMUSG00000047910.5|protocadherin beta 16
mm10_v2_chr3_+_101377074_101377158	0.848239	Sox6_Sox9	ENSMUST00000043983.5|Igsf3|ENSMUSG00000042035.6|immunoglobulin superfamily, member 3
mm10_v2_chr15_-_88978958_88979007	0.832254	Sox6_Sox9	ENSMUST00000042594.6|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) 	ENSMUST00000109368.1|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm10_v2_chr7_-_132813095_132813162	0.830723	Sox6_Sox9	ENSMUST00000106165.1|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr11_+_3330781_3330812	0.798661	Sox6_Sox9	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr6_+_17463927_17464071	0.796139	Sox6_Sox9	ENSMUST00000115442.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr18_+_37489465_37489465	0.795941	Sox6_Sox9	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr18_+_65698253_65698277	0.771754	Sox6_Sox9	ENSMUST00000115097.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like 	ENSMUST00000117694.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like
mm10_v2_chr6_-_132314757_132314757	0.756491	Sox6_Sox9	ENSMUST00000048686.8|Prpmp5|ENSMUSG00000052262.7|proline-rich protein MP5
mm10_v2_chr7_-_126676357_126676383	0.754196	Sox6_Sox9	ENSMUST00000106371.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000106372.3|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000155419.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr6_+_53573364_53573394	0.750624	Sox6_Sox9	ENSMUST00000047450.7|Creb5|ENSMUSG00000053007.6|cAMP responsive element binding protein 5
mm10_v2_chr10_+_67096456_67096534	0.743997	Sox6_Sox9	ENSMUST00000174317.1|Jmjd1c|ENSMUSG00000037876.10|jumonji domain containing 1C
mm10_v2_chr13_+_75967704_75967753	0.720278	Sox6_Sox9	ENSMUST00000022081.1|Spata9|ENSMUSG00000021590.6|spermatogenesis associated 9
mm10_v2_chr14_+_54431597_54431673	0.710177	Sox6_Sox9	ENSMUST00000089688.4|Mmp14|ENSMUSG00000000957.8|matrix metallopeptidase 14 (membrane-inserted)
mm10_v2_chr6_+_125552948_125552980	0.699288	Sox6_Sox9	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr1_-_93101825_93101849	0.693475	Sox6_Sox9	ENSMUST00000112958.2|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A
mm10_v2_chr2_-_146511899_146511979	0.688757	Sox6_Sox9	ENSMUST00000131824.1|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chr3_-_95891938_95892005	0.68483	Sox6_Sox9	ENSMUST00000036360.6|BC028528|ENSMUSG00000038543.7|cDNA sequence BC028528 	ENSMUST00000090476.3|BC028528|ENSMUSG00000038543.7|cDNA sequence BC028528
mm10_v2_chr10_-_62792243_62792368	0.683471	Sox6_Sox9	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chr2_+_4559742_4559756	0.678256	Sox6_Sox9	ENSMUST00000176828.1|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr5_+_109923400_109923400	0.672949	Sox6_Sox9	ENSMUST00000112544.1|Gm15446|ENSMUSG00000090015.2|predicted gene 15446
mm10_v2_chr5_+_3928267_3928300	0.668139	Sox6_Sox9	ENSMUST00000044492.8|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr19_+_55741810_55741842	0.667875	Sox6_Sox9	ENSMUST00000111657.3|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000061496.9|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000041717.7|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111662.4|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr19_-_56822161_56822220	0.666695	Sox6_Sox9	ENSMUST00000118592.1|A630007B06Rik|ENSMUSG00000035173.8|RIKEN cDNA A630007B06 gene
mm10_v2_chr3_+_135825788_135825800	0.663405	Sox6_Sox9	ENSMUST00000167390.1|Slc39a8|ENSMUSG00000053897.9|solute carrier family 39 (metal ion transporter), member 8
mm10_v2_chrX_+_136822671_136822780	0.659842	Sox6_Sox9	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr3_+_90541146_90541173	0.651538	Sox6_Sox9	ENSMUST00000107333.1|S100a16|ENSMUSG00000074457.4|S100 calcium binding protein A16 	ENSMUST00000107331.1|S100a16|ENSMUSG00000074457.4|S100 calcium binding protein A16 	ENSMUST00000098910.2|S100a16|ENSMUSG00000074457.4|S100 calcium binding protein A16
mm10_v2_chr15_-_79658749_79658798	0.650272	Sox6_Sox9	ENSMUST00000109646.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr7_-_130266237_130266263	0.642045	Sox6_Sox9	ENSMUST00000117872.1|Fgfr2|ENSMUSG00000030849.11|fibroblast growth factor receptor 2 	ENSMUST00000120187.1|Fgfr2|ENSMUSG00000030849.11|fibroblast growth factor receptor 2
mm10_v2_chr5_+_109996506_109996542	0.641859	Sox6_Sox9	ENSMUST00000112540.1|Zfp932|ENSMUSG00000066613.8|zinc finger protein 932 	ENSMUST00000099484.2|Zfp932|ENSMUSG00000066613.8|zinc finger protein 932 	ENSMUST00000125213.1|Zfp932|ENSMUSG00000066613.8|zinc finger protein 932 	ENSMUST00000143639.1|Zfp932|ENSMUSG00000066613.8|zinc finger protein 932
mm10_v2_chr15_-_102722120_102722137	0.630363	Sox6_Sox9	ENSMUST00000171838.1|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr1_-_72874877_72874891	0.629233	Sox6_Sox9	ENSMUST00000027377.8|Igfbp5|ENSMUSG00000026185.8|insulin-like growth factor binding protein 5
mm10_v2_chr4_+_122995944_122995958	0.624774	Sox6_Sox9	ENSMUST00000106252.2|Mycl|ENSMUSG00000028654.7|v-myc myelocytomatosis viral oncogene homolog, lung carcinoma derived (avian)
mm10_v2_chr17_-_24644933_24644976	0.622131	Sox6_Sox9	ENSMUST00000019684.5|Slc9a3r2|ENSMUSG00000002504.8|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm10_v2_chr3_-_66296807_66296837	0.617778	Sox6_Sox9	ENSMUST00000029419.7|Veph1|ENSMUSG00000027831.9|ventricular zone expressed PH domain-containing 1
mm10_v2_chr9_-_72111172_72111225	0.61153	Sox6_Sox9	ENSMUST00000183992.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr2_+_3713478_3713500	0.611462	Sox6_Sox9	ENSMUST00000115053.2|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr9_-_32541589_32541602	0.60918	Sox6_Sox9	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr5_+_138171997_138172021	0.600596	Sox6_Sox9	ENSMUST00000019662.4|Ap4m1|ENSMUSG00000019518.4|adaptor-related protein complex AP-4, mu 1 	ENSMUST00000151318.1|Ap4m1|ENSMUSG00000019518.4|adaptor-related protein complex AP-4, mu 1
mm10_v2_chr5_+_65131184_65131231	0.599548	Sox6_Sox9	ENSMUST00000031089.5|Klhl5|ENSMUSG00000054920.6|kelch-like 5 	ENSMUST00000101191.3|Klhl5|ENSMUSG00000054920.6|kelch-like 5
mm10_v2_chrX_+_112600526_112600526	0.598638	Sox6_Sox9	ENSMUST00000113409.1|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr6_+_143167210_143167267	0.589694	Sox6_Sox9	ENSMUST00000032413.4|Etnk1|ENSMUSG00000030275.4|ethanolamine kinase 1
mm10_v2_chr11_+_94044194_94044238	0.582717	Sox6_Sox9	ENSMUST00000092777.4|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9 	ENSMUST00000075695.6|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chrX_-_104201126_104201185	0.580465	Sox6_Sox9	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr4_+_122996035_122996099	0.579731	Sox6_Sox9	ENSMUST00000030407.7|Mycl|ENSMUSG00000028654.7|v-myc myelocytomatosis viral oncogene homolog, lung carcinoma derived (avian)
mm10_v2_chr4_+_137993445_137993474	0.579625	Sox6_Sox9	ENSMUST00000105831.2|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000084214.5|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3
mm10_v2_chr1_+_135729147_135729234	0.577054	Sox6_Sox9	ENSMUST00000027677.7|Csrp1|ENSMUSG00000026421.8|cysteine and glycine-rich protein 1
mm10_v2_chrX_+_77511002_77511100	0.575304	Sox6_Sox9	ENSMUST00000088217.5|Tbl1x|ENSMUSG00000025246.7|transducin (beta)-like 1 X-linked
mm10_v2_chr14_-_68655804_68655842	0.574367	Sox6_Sox9	ENSMUST00000111072.1|Adam28|ENSMUSG00000014725.8|a disintegrin and metallopeptidase domain 28 	ENSMUST00000022642.5|Adam28|ENSMUSG00000014725.8|a disintegrin and metallopeptidase domain 28
mm10_v2_chr11_+_94044241_94044273	0.573082	Sox6_Sox9	ENSMUST00000103168.3|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr4_+_148130883_148130915	0.572085	Sox6_Sox9	ENSMUST00000084129.2|Mad2l2|ENSMUSG00000029003.5|MAD2 mitotic arrest deficient-like 2
mm10_v2_chr1_-_93101854_93101879	0.568417	Sox6_Sox9	ENSMUST00000171796.1|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A 	ENSMUST00000171556.1|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A
mm10_v2_chr4_+_137993016_137993036	0.567122	Sox6_Sox9	ENSMUST00000105830.2|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000084215.5|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000058133.3|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000139759.1|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3
mm10_v2_chr15_-_102722150_102722178	0.563022	Sox6_Sox9	ENSMUST00000023818.3|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr4_-_34882919_34882964	0.559039	Sox6_Sox9	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr1_-_64122256_64122321	0.545987	Sox6_Sox9	ENSMUST00000135075.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr5_-_109751597_109751719	0.545154	Sox6_Sox9	ENSMUST00000112547.1|4930522L14Rik|ENSMUSG00000072762.3|RIKEN cDNA 4930522L14 gene
mm10_v2_chr12_+_24831583_24831658	0.535432	Sox6_Sox9	ENSMUST00000110942.3|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2 	ENSMUST00000078902.6|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2
mm10_v2_chr12_+_29938036_29938059	0.533613	Sox6_Sox9	ENSMUST00000122328.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila) 	ENSMUST00000118321.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila)
mm10_v2_chr7_-_126676428_126676439	0.532084	Sox6_Sox9	ENSMUST00000106373.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr1_+_160906372_160906460	0.530162	Sox6_Sox9	ENSMUST00000161609.1|Rc3h1|ENSMUSG00000040423.4|RING CCCH (C3H) domains 1
mm10_v2_chr4_-_116405986_116406120	0.526785	Sox6_Sox9	ENSMUST00000123072.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2 	ENSMUST00000144281.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2
mm10_v2_chr2_+_105682463_105682547	0.51413	Sox6_Sox9	ENSMUST00000140173.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000135412.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000138365.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000145744.1|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr7_-_132813528_132813667	0.51304	Sox6_Sox9	ENSMUST00000097999.2|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr15_-_79658889_79658956	0.496468	Sox6_Sox9	ENSMUST00000109648.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A 	ENSMUST00000046816.6|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr15_-_85503227_85503227	0.494868	Sox6_Sox9	ENSMUST00000178942.1|7530416G11Rik|ENSMUSG00000096607.1|RIKEN cDNA 7530416G11 gene
mm10_v2_chr10_+_29143996_29144126	0.483324	Sox6_Sox9	ENSMUST00000092629.2|Soga3|ENSMUSG00000038916.6|SOGA family member 3
mm10_v2_chr11_-_98329641_98329654	0.477286	Sox6_Sox9	ENSMUST00000041685.6|Neurod2|ENSMUSG00000038255.6|neurogenic differentiation 2
mm10_v2_chrX_+_166238901_166238914	0.477201	Sox6_Sox9	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr2_+_91257323_91257371	0.464834	Sox6_Sox9	ENSMUST00000111349.2|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3 	ENSMUST00000131711.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr6_-_122340200_122340244	0.464478	Sox6_Sox9	ENSMUST00000159384.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr15_+_6386598_6386785	0.457742	Sox6_Sox9	ENSMUST00000080880.5|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000110664.2|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000110663.2|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000161812.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000160134.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr10_+_39612934_39612934	0.455497	Sox6_Sox9	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr2_-_20968526_20968625	0.444213	Sox6_Sox9	ENSMUST00000141298.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21 	ENSMUST00000125783.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr13_+_14063776_14063822	0.442699	Sox6_Sox9	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr4_-_148130678_148130706	0.440856	Sox6_Sox9	ENSMUST00000030862.4|Draxin|ENSMUSG00000029005.4|dorsal inhibitory axon guidance protein
mm10_v2_chr15_-_12592556_12592556	0.436226	Sox6_Sox9	ENSMUST00000075317.5|Pdzd2|ENSMUSG00000022197.9|PDZ domain containing 2
mm10_v2_chr4_-_118490030_118490063	0.435457	Sox6_Sox9	ENSMUST00000047421.5|Tie1|ENSMUSG00000033191.8|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm10_v2_chrX_+_56963325_56963325	0.434305	Sox6_Sox9	ENSMUST00000096431.3|Gpr112|ENSMUSG00000053852.5|G protein-coupled receptor 112
mm10_v2_chr15_-_10713537_10713544	0.429632	Sox6_Sox9	ENSMUST00000090339.3|Rai14|ENSMUSG00000022246.7|retinoic acid induced 14
mm10_v2_chr13_+_21945084_21945140	0.42528	Sox6_Sox9	ENSMUST00000176511.1|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like) 	ENSMUST00000102978.1|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like) 	ENSMUST00000152258.2|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like)
mm10_v2_chr11_+_61653259_61653353	0.423592	Sox6_Sox9	ENSMUST00000004959.2|Grap|ENSMUSG00000004837.2|GRB2-related adaptor protein
mm10_v2_chr2_-_161109017_161109027	0.419133	Sox6_Sox9	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr4_+_108460000_108460030	0.41403	Sox6_Sox9	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr1_-_163289214_163289235	0.411799	Sox6_Sox9	ENSMUST00000183691.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr1_+_171121646_171121669	0.407597	Sox6_Sox9	ENSMUST00000027959.4|1700009P17Rik|ENSMUSG00000026649.8|RIKEN cDNA 1700009P17 gene
mm10_v2_chr12_+_24974914_24974948	0.40143	Sox6_Sox9	ENSMUST00000066652.5|Kidins220|ENSMUSG00000036333.10|kinase D-interacting substrate 220
mm10_v2_chr18_+_37473538_37473562	0.398352	Sox6_Sox9	ENSMUST00000050034.1|Pcdhb15|ENSMUSG00000047033.1|protocadherin beta 15
mm10_v2_chr16_+_78301673_78301760	0.392291	Sox6_Sox9	ENSMUST00000114229.2|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr11_-_6274830_6274886	0.38561	Sox6_Sox9	ENSMUST00000132147.1|Tmed4|ENSMUSG00000004394.6|transmembrane emp24 protein transport domain containing 4 	ENSMUST00000004508.6|Tmed4|ENSMUSG00000004394.6|transmembrane emp24 protein transport domain containing 4
mm10_v2_chr17_+_55445550_55445701	0.382989	Sox6_Sox9	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr18_+_37447641_37447674	0.3801	Sox6_Sox9	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr10_-_82764088_82764144	0.379986	Sox6_Sox9	ENSMUST00000130911.1|Nfyb|ENSMUSG00000020248.12|nuclear transcription factor-Y beta
mm10_v2_chr9_+_74976096_74976177	0.379502	Sox6_Sox9	ENSMUST00000081746.5|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr5_+_34549595_34549688	0.377785	Sox6_Sox9	ENSMUST00000179943.1|Sh3bp2|ENSMUSG00000054520.9|SH3-domain binding protein 2
mm10_v2_chr9_+_110532501_110532600	0.377633	Sox6_Sox9	ENSMUST00000153838.2|Setd2|ENSMUSG00000044791.10|SET domain containing 2
mm10_v2_chr13_-_106847267_106847267	0.376052	Sox6_Sox9	ENSMUST00000057427.4|Lrrc70|ENSMUSG00000078933.1|leucine rich repeat containing 70
mm10_v2_chr9_-_103480328_103480348	0.372689	Sox6_Sox9	ENSMUST00000124310.2|Bfsp2|ENSMUSG00000032556.9|beaded filament structural protein 2, phakinin
mm10_v2_chr11_+_88068242_88068289	0.371391	Sox6_Sox9	ENSMUST00000018521.4|Vezf1|ENSMUSG00000018377.4|vascular endothelial zinc finger 1
mm10_v2_chr16_+_94370618_94370784	0.37078	Sox6_Sox9	ENSMUST00000117648.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000147352.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150346.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000155692.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000153988.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000141856.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000152117.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150097.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000122895.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000151770.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr5_-_109691041_109691041	0.368248	Sox6_Sox9	ENSMUST00000092720.3|5430403G16Rik|ENSMUSG00000072763.2|RIKEN cDNA 5430403G16 gene
mm10_v2_chr4_+_48585276_48585365	0.366633	Sox6_Sox9	ENSMUST00000123476.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr7_-_105787567_105787654	0.366004	Sox6_Sox9	ENSMUST00000144189.1|Dchs1|ENSMUSG00000036862.8|dachsous 1 (Drosophila)
mm10_v2_chr12_-_58269162_58269258	0.363314	Sox6_Sox9	ENSMUST00000062254.2|Clec14a|ENSMUSG00000045930.2|C-type lectin domain family 14, member a
mm10_v2_chr5_-_8367982_8368107	0.363093	Sox6_Sox9	ENSMUST00000088761.4|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115386.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000050166.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000046838.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115388.2|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000088744.5|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115385.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22
mm10_v2_chr13_+_83732438_83732566	0.361383	Sox6_Sox9	ENSMUST00000182701.1|C130071C03Rik|ENSMUSG00000050334.6|RIKEN cDNA C130071C03 gene
mm10_v2_chr1_+_75546449_75546514	0.356994	Sox6_Sox9	ENSMUST00000150142.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr4_-_118489755_118489777	0.333947	Sox6_Sox9	ENSMUST00000184261.1|Tie1|ENSMUSG00000033191.8|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm10_v2_chr2_+_153031852_153032014	0.331628	Sox6_Sox9	ENSMUST00000037235.6|Xkr7|ENSMUSG00000042631.7|X Kell blood group precursor related family member 7 homolog
mm10_v2_chr11_+_87581041_87581067	0.330116	Sox6_Sox9	ENSMUST00000018544.5|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000063156.4|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000107960.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr10_-_58675631_58675654	0.322843	Sox6_Sox9	ENSMUST00000003312.4|Edar|ENSMUSG00000003227.4|ectodysplasin-A receptor
mm10_v2_chr4_-_134704235_134704295	0.321954	Sox6_Sox9	ENSMUST00000054096.6|Man1c1|ENSMUSG00000037306.7|mannosidase, alpha, class 1C, member 1 	ENSMUST00000038628.3|Man1c1|ENSMUSG00000037306.7|mannosidase, alpha, class 1C, member 1
mm10_v2_chr12_+_84996309_84996419	0.321221	Sox6_Sox9	ENSMUST00000168977.1|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1 	ENSMUST00000021670.8|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr9_-_72111755_72111821	0.320969	Sox6_Sox9	ENSMUST00000183492.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184523.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000034755.6|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr2_-_104816696_104816792	0.320485	Sox6_Sox9	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr19_+_47579602_47579681	0.32028	Sox6_Sox9	ENSMUST00000026043.5|Slk|ENSMUSG00000025060.8|STE20-like kinase
mm10_v2_chrX_+_57053549_57053615	0.317222	Sox6_Sox9	ENSMUST00000114751.2|Htatsf1|ENSMUSG00000067873.5|HIV TAT specific factor 1 	ENSMUST00000088652.5|Htatsf1|ENSMUSG00000067873.5|HIV TAT specific factor 1
mm10_v2_chr8_-_69184177_69184240	0.317091	Sox6_Sox9	ENSMUST00000185176.1|Lzts1|ENSMUSG00000036306.5|leucine zipper, putative tumor suppressor 1
mm10_v2_chr16_+_17276662_17276680	0.315959	Sox6_Sox9	ENSMUST00000069420.4|Tmem191c|ENSMUSG00000055692.12|transmembrane protein 191C
mm10_v2_chr1_-_168431502_168431513	0.315817	Sox6_Sox9	ENSMUST00000064438.4|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr1_+_158362261_158362304	0.315499	Sox6_Sox9	ENSMUST00000046110.9|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr1_+_158362330_158362411	0.308553	Sox6_Sox9	ENSMUST00000170718.1|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr18_+_37742088_37742137	0.307803	Sox6_Sox9	ENSMUST00000003599.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr18_-_16809233_16809324	0.307547	Sox6_Sox9	ENSMUST00000025166.7|Cdh2|ENSMUSG00000024304.8|cadherin 2
mm10_v2_chr2_-_168206875_168206922	0.30622	Sox6_Sox9	ENSMUST00000057793.4|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chr8_-_71395794_71395821	0.300024	Sox6_Sox9	ENSMUST00000049184.7|Ushbp1|ENSMUSG00000034911.7|Usher syndrome 1C binding protein 1
mm10_v2_chr12_-_100159601_100159672	0.298973	Sox6_Sox9	ENSMUST00000021596.7|Nrde2|ENSMUSG00000021179.7|nrde-2 necessary for RNA interference, domain containing
mm10_v2_chr12_+_8674129_8674150	0.287537	Sox6_Sox9	ENSMUST00000111123.2|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000178015.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000020915.3|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr2_-_65567465_65567495	0.287277	Sox6_Sox9	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr16_+_94370786_94370823	0.284148	Sox6_Sox9	ENSMUST00000147046.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000149885.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000127667.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000119131.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000145883.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr4_-_14621805_14621819	0.279565	Sox6_Sox9	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr10_-_53647080_53647080	0.277369	Sox6_Sox9	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr11_-_90687572_90687607	0.277169	Sox6_Sox9	ENSMUST00000107869.2|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken) 	ENSMUST00000154599.1|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken) 	ENSMUST00000107868.1|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken) 	ENSMUST00000020849.2|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken)
mm10_v2_chr1_-_168431695_168431750	0.276691	Sox6_Sox9	ENSMUST00000176790.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr5_-_138155694_138155744	0.275375	Sox6_Sox9	ENSMUST00000132318.1|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113 	ENSMUST00000049393.8|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113
mm10_v2_chr11_+_94044331_94044365	0.273704	Sox6_Sox9	ENSMUST00000024979.8|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr12_+_51348370_51348406	0.266749	Sox6_Sox9	ENSMUST00000121521.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr18_-_74961252_74961268	0.264925	Sox6_Sox9	ENSMUST00000066532.4|Lipg|ENSMUSG00000053846.4|lipase, endothelial
mm10_v2_chr15_+_41830921_41831001	0.263594	Sox6_Sox9	ENSMUST00000166917.1|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr4_-_70534904_70534987	0.259938	Sox6_Sox9	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr4_-_91399984_91400007	0.25864	Sox6_Sox9	ENSMUST00000102799.3|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr11_+_51261719_51261731	0.258452	Sox6_Sox9	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chr14_+_47663756_47663756	0.25645	Sox6_Sox9	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr1_+_176814660_176814660	0.255916	Sox6_Sox9	ENSMUST00000056773.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8 	ENSMUST00000027785.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8
mm10_v2_chr13_+_80886095_80886201	0.255366	Sox6_Sox9	ENSMUST00000161441.1|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr7_+_127800604_127800696	0.253375	Sox6_Sox9	ENSMUST00000046863.5|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000106272.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000139068.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr6_+_48593927_48593952	0.253164	Sox6_Sox9	ENSMUST00000135151.1|Repin1|ENSMUSG00000052751.10|replication initiator 1
mm10_v2_chr10_-_117376955_117376978	0.250479	Sox6_Sox9	ENSMUST00000069168.6|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176686.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr7_-_127725616_127725616	0.24811	Sox6_Sox9	ENSMUST00000076091.2|Ctf2|ENSMUSG00000060034.4|cardiotrophin 2
mm10_v2_chr19_+_3767953_3768033	0.246397	Sox6_Sox9	ENSMUST00000113970.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr4_+_94739276_94739300	0.242792	Sox6_Sox9	ENSMUST00000073939.6|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase 	ENSMUST00000102798.1|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase
mm10_v2_chr12_+_51348265_51348368	0.240563	Sox6_Sox9	ENSMUST00000119211.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr1_-_33814516_33814576	0.240014	Sox6_Sox9	ENSMUST00000044455.5|Zfp451|ENSMUSG00000042197.7|zinc finger protein 451 	ENSMUST00000115167.1|Zfp451|ENSMUSG00000042197.7|zinc finger protein 451
mm10_v2_chr4_+_43875524_43875558	0.238076	Sox6_Sox9	ENSMUST00000030198.6|Reck|ENSMUSG00000028476.7|reversion-inducing-cysteine-rich protein with kazal motifs
mm10_v2_chr12_+_19606929_19606929	0.238067	Sox6_Sox9	ENSMUST00000105167.1|Gm9257|ENSMUSG00000095254.1|predicted gene 9257
mm10_v2_chr11_-_106579111_106579141	0.236406	Sox6_Sox9	ENSMUST00000103070.2|Tex2|ENSMUSG00000040548.9|testis expressed gene 2
mm10_v2_chr5_+_30711849_30711905	0.234847	Sox6_Sox9	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr14_+_62837679_62837726	0.232216	Sox6_Sox9	ENSMUST00000014691.8|Wdfy2|ENSMUSG00000014547.9|WD repeat and FYVE domain containing 2
mm10_v2_chr8_+_106415319_106415396	0.229049	Sox6_Sox9	ENSMUST00000034382.7|Zfp90|ENSMUSG00000031907.8|zinc finger protein 90
mm10_v2_chr13_+_88821472_88821520	0.228141	Sox6_Sox9	ENSMUST00000118731.1|Edil3|ENSMUSG00000034488.8|EGF-like repeats and discoidin I-like domains 3 	ENSMUST00000081769.6|Edil3|ENSMUSG00000034488.8|EGF-like repeats and discoidin I-like domains 3
mm10_v2_chr4_+_48585135_48585187	0.227901	Sox6_Sox9	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr12_-_31950535_31950560	0.2269	Sox6_Sox9	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr5_+_48242549_48242549	0.225867	Sox6_Sox9	ENSMUST00000172493.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila)
mm10_v2_chr3_+_63295815_63295872	0.223365	Sox6_Sox9	ENSMUST00000029400.1|Mme|ENSMUSG00000027820.7|membrane metallo endopeptidase
mm10_v2_chr2_-_30903255_30903297	0.222422	Sox6_Sox9	ENSMUST00000102852.3|Ptges|ENSMUSG00000050737.11|prostaglandin E synthase
mm10_v2_chr6_+_48593883_48593900	0.220019	Sox6_Sox9	ENSMUST00000154010.1|Repin1|ENSMUSG00000052751.10|replication initiator 1 	ENSMUST00000163452.1|Repin1|ENSMUSG00000052751.10|replication initiator 1 	ENSMUST00000118229.1|Repin1|ENSMUSG00000052751.10|replication initiator 1 	ENSMUST00000009420.8|Repin1|ENSMUSG00000052751.10|replication initiator 1
mm10_v2_chr14_+_79515618_79515694	0.219909	Sox6_Sox9	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr12_+_111039334_111039400	0.218993	Sox6_Sox9	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr9_-_13446753_13446753	0.2189	Sox6_Sox9	ENSMUST00000167906.2|Gm17571|ENSMUSG00000090592.2|predicted gene, 17571
mm10_v2_chr6_+_34598530_34598587	0.218478	Sox6_Sox9	ENSMUST00000115027.1|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000115026.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr5_-_105343929_105343929	0.217724	Sox6_Sox9	ENSMUST00000183149.1|Gbp11|ENSMUSG00000098049.1|guanylate binding protein 11
mm10_v2_chr11_+_94044111_94044121	0.21743	Sox6_Sox9	ENSMUST00000132079.1|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr5_+_30711564_30711586	0.212657	Sox6_Sox9	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr18_+_37333853_37333946	0.21121	Sox6_Sox9	ENSMUST00000061717.2|Pcdhb6|ENSMUSG00000051678.3|protocadherin beta 6
mm10_v2_chr2_+_112284561_112284610	0.210794	Sox6_Sox9	ENSMUST00000053666.7|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr9_+_109095427_109095453	0.209048	Sox6_Sox9	ENSMUST00000072093.6|Plxnb1|ENSMUSG00000053646.7|plexin B1
mm10_v2_chr10_-_24836165_24836195	0.199568	Sox6_Sox9	ENSMUST00000020169.7|Enpp3|ENSMUSG00000019989.7|ectonucleotide pyrophosphatase/phosphodiesterase 3
mm10_v2_chr4_-_135873546_135873606	0.196959	Sox6_Sox9	ENSMUST00000142585.1|Pnrc2|ENSMUSG00000028675.6|proline-rich nuclear receptor coactivator 2
mm10_v2_chr4_-_135873801_135873853	0.196506	Sox6_Sox9	ENSMUST00000030436.5|Pnrc2|ENSMUSG00000028675.6|proline-rich nuclear receptor coactivator 2
mm10_v2_chr19_+_53600377_53600435	0.19586	Sox6_Sox9	ENSMUST00000025930.9|Smc3|ENSMUSG00000024974.10|structural maintenance of chromosomes 3
mm10_v2_chr13_+_88821606_88821642	0.194072	Sox6_Sox9	ENSMUST00000043111.6|Edil3|ENSMUSG00000034488.8|EGF-like repeats and discoidin I-like domains 3
mm10_v2_chr13_+_65278839_65278903	0.193794	Sox6_Sox9	ENSMUST00000155732.1|Zfp369|ENSMUSG00000021514.11|zinc finger protein 369
mm10_v2_chr5_+_34549568_34549581	0.193031	Sox6_Sox9	ENSMUST00000118545.1|Sh3bp2|ENSMUSG00000054520.9|SH3-domain binding protein 2
mm10_v2_chr13_+_65278810_65278838	0.189735	Sox6_Sox9	ENSMUST00000126879.1|Zfp369|ENSMUSG00000021514.11|zinc finger protein 369 	ENSMUST00000130799.1|Zfp369|ENSMUSG00000021514.11|zinc finger protein 369
mm10_v2_chr18_+_37725706_37725754	0.189023	Sox6_Sox9	ENSMUST00000066149.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr2_+_32151074_32151262	0.179579	Sox6_Sox9	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr10_+_69534039_69534070	0.179558	Sox6_Sox9	ENSMUST00000182557.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr2_+_68117713_68117713	0.179356	Sox6_Sox9	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr16_-_76373014_76373103	0.17862	Sox6_Sox9	ENSMUST00000054178.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr4_-_155863362_155863362	0.176277	Sox6_Sox9	ENSMUST00000030949.3|Tas1r3|ENSMUSG00000029072.3|taste receptor, type 1, member 3
mm10_v2_chr6_+_34598500_34598529	0.174668	Sox6_Sox9	ENSMUST00000079391.3|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000142512.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr8_-_46080284_46080284	0.173529	Sox6_Sox9	ENSMUST00000177186.1|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr18_+_35965088_35965110	0.168057	Sox6_Sox9	ENSMUST00000175734.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr11_+_116843278_116843278	0.16461	Sox6_Sox9	ENSMUST00000106370.3|Mettl23|ENSMUSG00000090266.4|methyltransferase like 23
mm10_v2_chr10_-_117376922_117376954	0.163696	Sox6_Sox9	ENSMUST00000177145.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176670.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr5_-_65537139_65537184	0.162248	Sox6_Sox9	ENSMUST00000149167.1|Smim14|ENSMUSG00000037822.6|small integral membrane protein 14
mm10_v2_chr4_+_130663321_130663412	0.161761	Sox6_Sox9	ENSMUST00000030315.6|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000105992.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000105991.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000143277.1|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000097864.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000097862.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila)
mm10_v2_chr2_-_157079212_157079276	0.159896	Sox6_Sox9	ENSMUST00000069098.6|Soga1|ENSMUSG00000055485.6|suppressor of glucose, autophagy associated 1
mm10_v2_chr10_-_116473875_116473929	0.159725	Sox6_Sox9	ENSMUST00000068233.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr14_-_20618339_20618365	0.157259	Sox6_Sox9	ENSMUST00000035340.7|Usp54|ENSMUSG00000034235.10|ubiquitin specific peptidase 54
mm10_v2_chr10_-_116473418_116473514	0.156778	Sox6_Sox9	ENSMUST00000087965.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4 	ENSMUST00000164271.1|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr2_-_11502025_11502049	0.155458	Sox6_Sox9	ENSMUST00000114846.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr2_-_65567505_65567627	0.15505	Sox6_Sox9	ENSMUST00000100069.2|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr19_+_8898090_8898122	0.149414	Sox6_Sox9	ENSMUST00000096246.3|Ganab|ENSMUSG00000071650.5|alpha glucosidase 2 alpha neutral subunit
mm10_v2_chr2_+_68104671_68104671	0.149052	Sox6_Sox9	ENSMUST00000042456.3|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr1_-_22805994_22806007	0.14725	Sox6_Sox9	ENSMUST00000097808.4|Rims1|ENSMUSG00000041670.9|regulating synaptic membrane exocytosis 1
mm10_v2_chr7_+_25681158_25681158	0.14714	Sox6_Sox9	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr2_-_6884940_6884957	0.144456	Sox6_Sox9	ENSMUST00000183091.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182851.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr10_-_63339023_63339042	0.14137	Sox6_Sox9	ENSMUST00000177694.1|Sirt1|ENSMUSG00000020063.10|sirtuin 1 	ENSMUST00000020257.6|Sirt1|ENSMUSG00000020063.10|sirtuin 1 	ENSMUST00000105442.2|Sirt1|ENSMUSG00000020063.10|sirtuin 1
mm10_v2_chr12_+_8674224_8674275	0.1397	Sox6_Sox9	ENSMUST00000111122.2|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr13_+_65512678_65512678	0.132512	Sox6_Sox9	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr2_+_102658640_102658669	0.131863	Sox6_Sox9	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr11_-_50292302_50292363	0.129693	Sox6_Sox9	ENSMUST00000059458.4|Maml1|ENSMUSG00000050567.10|mastermind like 1 (Drosophila)
mm10_v2_chr14_-_47568427_47568436	0.127963	Sox6_Sox9	ENSMUST00000042988.6|Atg14|ENSMUSG00000037526.6|autophagy related 14
mm10_v2_chr14_+_66344296_66344316	0.123485	Sox6_Sox9	ENSMUST00000152093.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4 	ENSMUST00000074523.6|Stmn4|ENSMUSG00000022044.8|stathmin-like 4
mm10_v2_chr15_-_37458523_37458581	0.119973	Sox6_Sox9	ENSMUST00000116445.2|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr13_-_104816908_104816953	0.119932	Sox6_Sox9	ENSMUST00000022228.6|Cwc27|ENSMUSG00000021715.6|CWC27 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr2_+_156312589_156312633	0.118241	Sox6_Sox9	ENSMUST00000073942.5|Cnbd2|ENSMUSG00000038085.7|cyclic nucleotide binding domain containing 2 	ENSMUST00000109580.1|Cnbd2|ENSMUSG00000038085.7|cyclic nucleotide binding domain containing 2
mm10_v2_chr19_-_24477356_24477490	0.117928	Sox6_Sox9	ENSMUST00000099556.1|Fam122a|ENSMUSG00000074922.1|family with sequence similarity 122, member A
mm10_v2_chr2_+_32535315_32535359	0.117656	Sox6_Sox9	ENSMUST00000133512.1|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A 	ENSMUST00000048375.5|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A
mm10_v2_chr2_-_168207063_168207142	0.117077	Sox6_Sox9	ENSMUST00000088001.5|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chrX_+_101383726_101383741	0.115185	Sox6_Sox9	ENSMUST00000119190.1|Gjb1|ENSMUSG00000047797.8|gap junction protein, beta 1
mm10_v2_chr9_-_88522876_88522929	0.114578	Sox6_Sox9	ENSMUST00000180563.2|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000183030.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000182232.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5
mm10_v2_chr4_+_43493345_43493430	0.111733	Sox6_Sox9	ENSMUST00000030181.5|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107 	ENSMUST00000107922.2|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107
mm10_v2_chr4_-_99120898_99120935	0.109769	Sox6_Sox9	ENSMUST00000075836.5|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chr15_-_26895049_26895049	0.107324	Sox6_Sox9	ENSMUST00000059204.9|Fbxl7|ENSMUSG00000043556.9|F-box and leucine-rich repeat protein 7
mm10_v2_chr9_-_107770945_107771007	0.107127	Sox6_Sox9	ENSMUST00000183248.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182022.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000035199.6|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182659.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5
mm10_v2_chr2_-_6884975_6884996	0.105935	Sox6_Sox9	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr11_-_11890368_11890379	0.103554	Sox6_Sox9	ENSMUST00000155690.1|Ddc|ENSMUSG00000020182.10|dopa decarboxylase
mm10_v2_chr4_+_11579647_11579674	0.103164	Sox6_Sox9	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr16_-_24393588_24393697	0.100449	Sox6_Sox9	ENSMUST00000181640.1|1110054M08Rik|ENSMUSG00000097867.1|RIKEN cDNA 1110054M08 gene
mm10_v2_chr12_+_84996487_84996496	0.0986598	Sox6_Sox9	ENSMUST00000101202.3|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr2_-_84650714_84650749	0.0982728	Sox6_Sox9	ENSMUST00000111697.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111670.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111696.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111678.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111690.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111695.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111677.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111698.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000099941.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111676.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111694.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111675.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111689.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111687.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111692.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111685.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111686.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111688.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111693.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111684.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1
mm10_v2_chr5_-_23616528_23616597	0.0978003	Sox6_Sox9	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr10_-_53699343_53699343	0.0961743	Sox6_Sox9	ENSMUST00000163761.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr16_-_4213404_4213404	0.0935593	Sox6_Sox9	ENSMUST00000023165.6|Crebbp|ENSMUSG00000022521.8|CREB binding protein
mm10_v2_chr4_+_48585193_48585215	0.09128	Sox6_Sox9	ENSMUST00000107703.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr1_+_39900883_39900963	0.0904091	Sox6_Sox9	ENSMUST00000163854.2|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4 	ENSMUST00000168431.1|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4
mm10_v2_chr12_+_40446050_40446099	0.0898303	Sox6_Sox9	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr6_-_31563978_31563989	0.0892286	Sox6_Sox9	ENSMUST00000026698.7|Podxl|ENSMUSG00000025608.9|podocalyxin-like
mm10_v2_chr4_+_100776664_100776692	0.0869481	Sox6_Sox9	ENSMUST00000030257.8|Cachd1|ENSMUSG00000028532.8|cache domain containing 1 	ENSMUST00000097955.2|Cachd1|ENSMUSG00000028532.8|cache domain containing 1
mm10_v2_chr1_+_133045984_133046082	0.086446	Sox6_Sox9	ENSMUST00000077730.5|Pik3c2b|ENSMUSG00000026447.10|phosphoinositide-3-kinase, class 2, beta polypeptide
mm10_v2_chr9_-_7835255_7835255	0.0855482	Sox6_Sox9	ENSMUST00000074246.6|Birc2|ENSMUSG00000057367.6|baculoviral IAP repeat-containing 2
mm10_v2_chr10_+_116301374_116301428	0.0846591	Sox6_Sox9	ENSMUST00000092167.5|Ptprb|ENSMUSG00000020154.9|protein tyrosine phosphatase, receptor type, B
mm10_v2_chr11_-_3863895_3863910	0.0839468	Sox6_Sox9	ENSMUST00000070552.7|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2
mm10_v2_chr7_+_141949982_141950086	0.0826533	Sox6_Sox9	ENSMUST00000105989.2|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000075528.5|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000174499.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr11_-_62392605_62392659	0.0821497	Sox6_Sox9	ENSMUST00000151498.2|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1 	ENSMUST00000159069.1|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1
mm10_v2_chr9_+_101074727_101074727	0.0759624	Sox6_Sox9	ENSMUST00000085177.3|Msl2|ENSMUSG00000066415.3|male-specific lethal 2 homolog (Drosophila)
mm10_v2_chr2_+_102659213_102659281	0.0756697	Sox6_Sox9	ENSMUST00000111213.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr15_+_34082664_34082734	0.0732801	Sox6_Sox9	ENSMUST00000022865.9|Mtdh|ENSMUSG00000022255.9|metadherin
mm10_v2_chrX_+_109095359_109095391	0.0707489	Sox6_Sox9	ENSMUST00000033598.8|Sh3bgrl|ENSMUSG00000031246.8|SH3-binding domain glutamic acid-rich protein like
mm10_v2_chrX_-_16911774_16911774	0.0696592	Sox6_Sox9	ENSMUST00000040134.7|Ndp|ENSMUSG00000040138.7|Norrie disease (pseudoglioma) (human)
mm10_v2_chr9_+_122923050_122923099	0.0695563	Sox6_Sox9	ENSMUST00000051667.7|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105 	ENSMUST00000148851.1|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105
mm10_v2_chr2_-_84650760_84650771	0.0681658	Sox6_Sox9	ENSMUST00000111691.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1
mm10_v2_chr5_+_14514918_14514951	0.0675565	Sox6_Sox9	ENSMUST00000030691.10|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein) 	ENSMUST00000182407.1|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein)
mm10_v2_chr17_-_90088343_90088373	0.0663987	Sox6_Sox9	ENSMUST00000173917.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr11_-_77489666_77489687	0.065544	Sox6_Sox9	ENSMUST00000037593.7|Ankrd13b|ENSMUSG00000037907.10|ankyrin repeat domain 13b 	ENSMUST00000092892.3|Ankrd13b|ENSMUSG00000037907.10|ankyrin repeat domain 13b
mm10_v2_chr3_+_19957037_19957073	0.0622667	Sox6_Sox9	ENSMUST00000091309.5|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000108329.1|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000003714.6|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr8_+_120488416_120488490	0.0618049	Sox6_Sox9	ENSMUST00000034279.9|Gse1|ENSMUSG00000031822.12|genetic suppressor element 1
mm10_v2_chr3_-_116808166_116808198	0.0614633	Sox6_Sox9	ENSMUST00000040603.7|Agl|ENSMUSG00000033400.8|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm10_v2_chr7_+_80860909_80860972	0.0602713	Sox6_Sox9	ENSMUST00000132163.1|Zscan2|ENSMUSG00000038797.7|zinc finger and SCAN domain containing 2 	ENSMUST00000147125.1|Zscan2|ENSMUSG00000038797.7|zinc finger and SCAN domain containing 2
mm10_v2_chr12_+_19954505_19954505	0.0582642	Sox6_Sox9	ENSMUST00000179133.1|Gm21863|ENSMUSG00000095470.1|predicted gene, 21863
mm10_v2_chr12_+_113140198_113140257	0.0557455	Sox6_Sox9	ENSMUST00000084882.4|Crip2|ENSMUSG00000006356.6|cysteine rich protein 2
mm10_v2_chr11_+_32455362_32455438	0.055516	Sox6_Sox9	ENSMUST00000051053.4|Ubtd2|ENSMUSG00000044949.4|ubiquitin domain containing 2
mm10_v2_chr12_-_76177251_76177265	0.0455272	Sox6_Sox9	ENSMUST00000101291.3|Esr2|ENSMUSG00000021055.7|estrogen receptor 2 (beta) 	ENSMUST00000076634.4|Esr2|ENSMUSG00000021055.7|estrogen receptor 2 (beta)
mm10_v2_chr7_-_45814302_45814321	0.0388403	Sox6_Sox9	ENSMUST00000107729.1|Cyth2|ENSMUSG00000003269.8|cytohesin 2 	ENSMUST00000056820.6|Cyth2|ENSMUSG00000003269.8|cytohesin 2
mm10_v2_chrX_-_134161928_134161928	0.0388108	Sox6_Sox9	ENSMUST00000033611.4|Xkrx|ENSMUSG00000031258.4|X Kell blood group precursor related X linked
mm10_v2_chr1_+_34005872_34005908	0.0387276	Sox6_Sox9	ENSMUST00000182296.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr11_+_58330744_58330777	0.0386509	Sox6_Sox9	ENSMUST00000073128.6|Sh3bp5l|ENSMUSG00000013646.11|SH3 binding domain protein 5 like
mm10_v2_chr3_+_90476121_90476220	0.0379026	Sox6_Sox9	ENSMUST00000001042.8|Ilf2|ENSMUSG00000001016.8|interleukin enhancer binding factor 2
mm10_v2_chr6_+_122308684_122308720	0.0342241	Sox6_Sox9	ENSMUST00000007602.8|M6pr|ENSMUSG00000007458.8|mannose-6-phosphate receptor, cation dependent 	ENSMUST00000112610.1|M6pr|ENSMUSG00000007458.8|mannose-6-phosphate receptor, cation dependent
mm10_v2_chr11_-_49187159_49187195	0.0342041	Sox6_Sox9	ENSMUST00000046522.6|Btnl9|ENSMUSG00000040283.8|butyrophilin-like 9
mm10_v2_chr5_-_92083455_92083557	0.0322188	Sox6_Sox9	ENSMUST00000169094.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2 	ENSMUST00000167918.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2
mm10_v2_chr7_-_45814277_45814300	0.031077	Sox6_Sox9	ENSMUST00000107728.1|Cyth2|ENSMUSG00000003269.8|cytohesin 2
mm10_v2_chr14_+_75136326_75136346	0.0293756	Sox6_Sox9	ENSMUST00000145303.1|Lcp1|ENSMUSG00000021998.10|lymphocyte cytosolic protein 1
mm10_v2_chr14_-_16575456_16575501	0.0286553	Sox6_Sox9	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chr17_-_27622785_27622964	0.0279283	Sox6_Sox9	ENSMUST00000176458.1|Nudt3|ENSMUSG00000024213.7|nudix (nucleotide diphosphate linked moiety X)-type motif 3 	ENSMUST00000114886.1|Nudt3|ENSMUSG00000024213.7|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm10_v2_chr17_-_34615965_34615978	0.0279197	Sox6_Sox9	ENSMUST00000097345.3|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8 	ENSMUST00000015611.7|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8
mm10_v2_chr6_+_86628174_86628208	0.0276973	Sox6_Sox9	ENSMUST00000043400.6|Asprv1|ENSMUSG00000033508.6|aspartic peptidase, retroviral-like 1
mm10_v2_chr5_+_64230285_64230312	0.0245139	Sox6_Sox9	ENSMUST00000119756.1|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr7_+_27195781_27195885	0.0244202	Sox6_Sox9	ENSMUST00000108379.1|BC024978|ENSMUSG00000078786.3|cDNA sequence BC024978 	ENSMUST00000179391.1|BC024978|ENSMUSG00000078786.3|cDNA sequence BC024978
mm10_v2_chr15_+_75596645_75596662	0.0239861	Sox6_Sox9	ENSMUST00000023243.4|Gpihbp1|ENSMUSG00000022579.4|GPI-anchored HDL-binding protein 1
mm10_v2_chr1_-_153900198_153900210	0.0228771	Sox6_Sox9	ENSMUST00000123490.1|5830403L16Rik|ENSMUSG00000045968.6|RIKEN cDNA 5830403L16 gene
mm10_v2_chr2_+_150909565_150909642	0.0223072	Sox6_Sox9	ENSMUST00000028948.4|Gins1|ENSMUSG00000027454.4|GINS complex subunit 1 (Psf1 homolog)
mm10_v2_chr9_-_75597643_75597656	0.0222783	Sox6_Sox9	ENSMUST00000164100.1|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chr2_+_32741452_32741499	0.0192271	Sox6_Sox9	ENSMUST00000131101.1|Sh2d3c|ENSMUSG00000059013.6|SH2 domain containing 3C
mm10_v2_chr11_-_11890394_11890408	0.0181674	Sox6_Sox9	ENSMUST00000109659.2|Ddc|ENSMUSG00000020182.10|dopa decarboxylase
mm10_v2_chrX_-_103981242_103981287	0.0143695	Sox6_Sox9	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr17_+_35000987_35001097	0.0130103	Sox6_Sox9	ENSMUST00000087315.7|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase 	ENSMUST00000173584.1|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase
mm10_v2_chr11_-_96977660_96977711	0.0125883	Sox6_Sox9	ENSMUST00000107626.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor 	ENSMUST00000107624.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor
mm10_v2_chr5_-_92083667_92083735	0.0105349	Sox6_Sox9	ENSMUST00000113127.3|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2
mm10_v2_chr5_-_100038869_100038885	0.00940977	Sox6_Sox9	ENSMUST00000153442.1|Hnrnpdl|ENSMUSG00000029328.9|heterogeneous nuclear ribonucleoprotein D-like
mm10_v2_chr13_+_23746734_23746763	0.00908591	Sox6_Sox9	ENSMUST00000099703.2|Hist1h2bb|ENSMUSG00000075031.2|histone cluster 1, H2bb
mm10_v2_chr6_-_124741374_124741402	0.00723075	Sox6_Sox9	ENSMUST00000004389.5|Grcc10|ENSMUSG00000072772.3|gene rich cluster, C10 gene
mm10_v2_chr9_+_54863742_54863801	0.00621533	Sox6_Sox9	ENSMUST00000034843.7|Ireb2|ENSMUSG00000032293.7|iron responsive element binding protein 2
mm10_v2_chrX_+_20425688_20425762	0.00552824	Sox6_Sox9	ENSMUST00000115384.2|Phf16|ENSMUSG00000037315.8|PHD finger protein 16
mm10_v2_chr4_+_42655251_42655251	0.00478977	Sox6_Sox9	ENSMUST00000177785.1|Ccl27b|ENSMUSG00000096826.1|chemokine (C-C motif) ligand 27b
mm10_v2_chr2_-_37703845_37703885	0.00465245	Sox6_Sox9	ENSMUST00000155237.1|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr5_-_131616599_131616611	0.00392853	Sox6_Sox9	ENSMUST00000161804.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr11_-_78497458_78497539	0.00286016	Sox6_Sox9	ENSMUST00000108287.3|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr19_+_34217588_34217624	0.00214991	Sox6_Sox9	ENSMUST00000119603.1|Stambpl1|ENSMUSG00000024776.11|STAM binding protein like 1
mm10_v2_chr14_+_66344369_66344380	0.00100613	Sox6_Sox9	ENSMUST00000118426.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4 	ENSMUST00000121955.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4 	ENSMUST00000120229.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4 	ENSMUST00000134440.1|Stmn4|ENSMUSG00000022044.8|stathmin-like 4
mm10_v2_chr6_+_29859686_29859710	0.000648682	Sox6_Sox9	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
