mm10_v2_chr9_+_3013140_3013140	29.2877	Sp100	ENSMUST00000143083.2|Gm10721|ENSMUSG00000096519.1|predicted gene 10721
mm10_v2_chr9_+_3023547_3023547	28.8533	Sp100	ENSMUST00000099046.3|Gm10718|ENSMUSG00000095186.1|predicted gene 10718
mm10_v2_chr14_-_19418930_19418930	24.4104	Sp100	ENSMUST00000177817.1|Gm21738|ENSMUSG00000095280.1|predicted gene, 21738
mm10_v2_chr2_-_98667264_98667301	24.0986	Sp100	ENSMUST00000099683.1|Gm10800|ENSMUSG00000075014.1|predicted gene 10800
mm10_v2_chr9_+_3025417_3025490	23.9339	Sp100	ENSMUST00000075573.6|Gm10717|ENSMUSG00000095891.1|predicted gene 10717
mm10_v2_chr9_+_3017408_3017543	21.8685	Sp100	ENSMUST00000099049.3|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr9_+_3018753_3018779	20.5905	Sp100	ENSMUST00000179272.1|Gm10719|ENSMUSG00000095547.1|predicted gene 10719
mm10_v2_chr9_+_3004457_3004523	20.2402	Sp100	ENSMUST00000178348.1|Gm11168|ENSMUSG00000096385.1|predicted gene 11168
mm10_v2_chr9_+_3000922_3000922	17.9065	Sp100	ENSMUST00000151376.2|Gm10722|ENSMUSG00000091028.1|predicted gene 10722
mm10_v2_chr9_+_3027439_3027523	17.6949	Sp100	ENSMUST00000177875.1|Gm10717|ENSMUSG00000095891.1|predicted gene 10717 	ENSMUST00000179982.1|Gm10717|ENSMUSG00000095891.1|predicted gene 10717
mm10_v2_chr9_+_3036877_3036877	17.0946	Sp100	ENSMUST00000155807.2|Gm10715|ENSMUSG00000096201.1|predicted gene 10715
mm10_v2_chr9_+_3015654_3015722	15.331	Sp100	ENSMUST00000099050.3|Gm10720|ENSMUSG00000074564.3|predicted gene 10720
mm10_v2_chrX_-_61185558_61185558	5.37653	Sp100	ENSMUST00000166381.1|Cdr1|ENSMUSG00000090546.1|cerebellar degeneration related antigen 1
mm10_v2_chr3_+_135212557_135212585	2.26041	Sp100	ENSMUST00000062893.7|Cenpe|ENSMUSG00000045328.7|centromere protein E
mm10_v2_chr9_+_25089422_25089422	1.7632	Sp100	ENSMUST00000086238.2|Gm10181|ENSMUSG00000066810.2|predicted gene 10181
mm10_v2_chr7_-_131327325_131327325	1.75492	Sp100	ENSMUST00000033146.7|1700007K09Rik|ENSMUSG00000030858.9|RIKEN cDNA 1700007K09 gene
mm10_v2_chr12_-_74316394_74316394	1.69193	Sp100	ENSMUST00000110441.1|Gm11042|ENSMUSG00000079061.3|predicted gene 11042
mm10_v2_chr7_-_14562171_14562171	1.46337	Sp100	ENSMUST00000181796.1|Vmn1r90|ENSMUSG00000097425.1|vomeronasal 1 receptor 90
mm10_v2_chrX_-_143827391_143827414	1.38157	Sp100	ENSMUST00000087316.5|Capn6|ENSMUSG00000067276.5|calpain 6
mm10_v2_chr2_+_158375638_158375721	1.29316	Sp100	ENSMUST00000109488.1|Snhg11|ENSMUSG00000044349.9|small nucleolar RNA host gene 11
mm10_v2_chr3_-_113574242_113574272	1.2291	Sp100	ENSMUST00000142505.2|Amy1|ENSMUSG00000074264.6|amylase 1, salivary
mm10_v2_chr2_-_140170528_140170569	1.16359	Sp100	ENSMUST00000046030.7|Esf1|ENSMUSG00000045624.9|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
mm10_v2_chr12_-_69357120_69357181	1.10789	Sp100	ENSMUST00000021368.8|Nemf|ENSMUSG00000020982.8|nuclear export mediator factor
mm10_v2_chr2_-_119618455_119618510	1.08932	Sp100	ENSMUST00000123818.1|Oip5|ENSMUSG00000072980.3|Opa interacting protein 5
mm10_v2_chr14_-_33978751_33978791	1.04509	Sp100	ENSMUST00000166737.1|Zfp488|ENSMUSG00000044519.8|zinc finger protein 488
mm10_v2_chr8_-_11678728_11678754	0.998933	Sp100	ENSMUST00000033906.4|1700016D06Rik|ENSMUSG00000031509.4|RIKEN cDNA 1700016D06 gene
mm10_v2_chr13_+_30659999_30660116	0.973688	Sp100	ENSMUST00000091672.6|Dusp22|ENSMUSG00000069255.6|dual specificity phosphatase 22 	ENSMUST00000110310.1|Dusp22|ENSMUSG00000069255.6|dual specificity phosphatase 22 	ENSMUST00000095914.5|Dusp22|ENSMUSG00000069255.6|dual specificity phosphatase 22
mm10_v2_chr8_-_4779513_4779591	0.868799	Sp100	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr9_+_89909775_89909924	0.850721	Sp100	ENSMUST00000034912.4|Rasgrf1|ENSMUSG00000032356.6|RAS protein-specific guanine nucleotide-releasing factor 1 	ENSMUST00000034909.4|Rasgrf1|ENSMUSG00000032356.6|RAS protein-specific guanine nucleotide-releasing factor 1
mm10_v2_chrX_-_60403947_60404015	0.819798	Sp100	ENSMUST00000033480.6|Atp11c|ENSMUSG00000062949.7|ATPase, class VI, type 11C 	ENSMUST00000101527.2|Atp11c|ENSMUSG00000062949.7|ATPase, class VI, type 11C
mm10_v2_chr6_-_117907753_117907761	0.768185	Sp100	ENSMUST00000035534.4|4933440N22Rik|ENSMUSG00000042087.4|RIKEN cDNA 4933440N22 gene
mm10_v2_chr7_-_5413145_5413145	0.761087	Sp100	ENSMUST00000108569.2|Vmn1r58|ENSMUSG00000078808.4|vomeronasal 1 receptor 58
mm10_v2_chr17_-_22867075_22867110	0.757876	Sp100	ENSMUST00000150092.1|Zfp945|ENSMUSG00000059142.9|zinc finger protein 945
mm10_v2_chr18_-_61211380_61211454	0.753237	Sp100	ENSMUST00000148829.1|Slc26a2|ENSMUSG00000034320.8|solute carrier family 26 (sulfate transporter), member 2
mm10_v2_chr17_-_22867118_22867141	0.72649	Sp100	ENSMUST00000160457.2|Zfp945|ENSMUSG00000059142.9|zinc finger protein 945 	ENSMUST00000088696.5|Zfp945|ENSMUSG00000059142.9|zinc finger protein 945
mm10_v2_chr9_-_36726374_36726658	0.72593	Sp100	ENSMUST00000172702.2|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000172742.1|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000034625.5|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1
mm10_v2_chr14_-_67715585_67715681	0.720471	Sp100	ENSMUST00000163100.1|Cdca2|ENSMUSG00000048922.12|cell division cycle associated 2 	ENSMUST00000132705.1|Cdca2|ENSMUSG00000048922.12|cell division cycle associated 2 	ENSMUST00000124045.1|Cdca2|ENSMUSG00000048922.12|cell division cycle associated 2
mm10_v2_chr14_-_105176860_105176918	0.71527	Sp100	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chrX_-_104671048_104671071	0.681446	Sp100	ENSMUST00000042070.5|Zdhhc15|ENSMUSG00000033906.5|zinc finger, DHHC domain containing 15
mm10_v2_chr9_+_59750876_59750918	0.665257	Sp100	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr14_+_56668242_56668349	0.658865	Sp100	ENSMUST00000116468.1|Mphosph8|ENSMUSG00000079184.4|M-phase phosphoprotein 8
mm10_v2_chr5_-_92278155_92278171	0.656166	Sp100	ENSMUST00000159345.1|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase 	ENSMUST00000113102.3|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase
mm10_v2_chr14_-_87141114_87141148	0.639425	Sp100	ENSMUST00000168889.1|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chrM_+_10167_10167	0.633375	Sp100	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr10_-_86705485_86705509	0.628644	Sp100	ENSMUST00000020238.7|Hsp90b1|ENSMUSG00000020048.7|heat shock protein 90, beta (Grp94), member 1
mm10_v2_chr13_-_66851513_66851513	0.620725	Sp100	ENSMUST00000169322.1|Gm17404|ENSMUSG00000095206.1|predicted gene, 17404
mm10_v2_chr17_-_10320229_10320346	0.617583	Sp100	ENSMUST00000053066.6|Qk|ENSMUSG00000044407.6|quaking
mm10_v2_chr17_+_21691860_21691860	0.614019	Sp100	ENSMUST00000072133.4|Gm10226|ENSMUSG00000067929.3|predicted gene 10226
mm10_v2_chr8_+_25849618_25849633	0.60903	Sp100	ENSMUST00000098858.3|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1
mm10_v2_chr19_+_38931008_38931174	0.606264	Sp100	ENSMUST00000145051.1|Hells|ENSMUSG00000025001.5|helicase, lymphoid specific
mm10_v2_chr14_-_119099399_119099445	0.598269	Sp100	ENSMUST00000156203.1|Uggt2|ENSMUSG00000042104.12|UDP-glucose glycoprotein glucosyltransferase 2
mm10_v2_chr2_-_129297205_129297216	0.56542	Sp100	ENSMUST00000052708.6|Ckap2l|ENSMUSG00000048327.6|cytoskeleton associated protein 2-like
mm10_v2_chr13_-_104228833_104228849	0.557458	Sp100	ENSMUST00000022226.4|Ppwd1|ENSMUSG00000021713.8|peptidylprolyl isomerase domain and WD repeat containing 1
mm10_v2_chr8_+_94179089_94179248	0.5425	Sp100	ENSMUST00000034215.6|Mt1|ENSMUSG00000031765.7|metallothionein 1
mm10_v2_chrM_+_9870_9885	0.538599	Sp100	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chr2_-_132578244_132578255	0.532398	Sp100	ENSMUST00000110142.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm10_v2_chr2_-_86347764_86347764	0.531856	Sp100	ENSMUST00000099894.2|Olfr1055|ENSMUSG00000075189.2|olfactory receptor 1055
mm10_v2_chr14_-_103099499_103099554	0.530801	Sp100	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chr8_+_93810832_93810843	0.526283	Sp100	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr11_-_118093702_118093702	0.52328	Sp100	ENSMUST00000018719.3|Dnah17|ENSMUSG00000033987.9|dynein, axonemal, heavy chain 17
mm10_v2_chr19_+_38930909_38930920	0.519931	Sp100	ENSMUST00000025965.5|Hells|ENSMUSG00000025001.5|helicase, lymphoid specific
mm10_v2_chr6_+_96113146_96113170	0.514497	Sp100	ENSMUST00000122120.1|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr1_-_93342734_93342803	0.509571	Sp100	ENSMUST00000027493.3|Pask|ENSMUSG00000026274.5|PAS domain containing serine/threonine kinase
mm10_v2_chr10_-_42583628_42583639	0.50305	Sp100	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr11_+_78176711_78176761	0.494525	Sp100	ENSMUST00000098545.5|Tlcd1|ENSMUSG00000019437.11|TLC domain containing 1
mm10_v2_chr2_+_119897212_119897305	0.493816	Sp100	ENSMUST00000046717.6|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000110774.1|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000110773.2|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000079934.5|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000156510.1|Mga|ENSMUSG00000033943.9|MAX gene associated
mm10_v2_chrX_-_70365052_70365112	0.485041	Sp100	ENSMUST00000101509.2|Ids|ENSMUSG00000035847.9|iduronate 2-sulfatase
mm10_v2_chr18_-_34624562_34624601	0.479888	Sp100	ENSMUST00000003876.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115766.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000097626.3|Brd8|ENSMUSG00000003778.8|bromodomain containing 8 	ENSMUST00000115765.1|Brd8|ENSMUSG00000003778.8|bromodomain containing 8
mm10_v2_chr4_-_25800239_25800266	0.46776	Sp100	ENSMUST00000108199.1|Fut9|ENSMUSG00000055373.8|fucosyltransferase 9
mm10_v2_chr3_-_88410295_88410351	0.45696	Sp100	ENSMUST00000056370.7|Pmf1|ENSMUSG00000028066.10|polyamine-modulated factor 1
mm10_v2_chr14_-_87141206_87141239	0.455236	Sp100	ENSMUST00000022599.7|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chr12_+_112620030_112620056	0.446045	Sp100	ENSMUST00000180015.1|Adssl1|ENSMUSG00000011148.7|adenylosuccinate synthetase like 1 	ENSMUST00000021726.6|Adssl1|ENSMUSG00000011148.7|adenylosuccinate synthetase like 1
mm10_v2_chr9_-_21312255_21312333	0.445159	Sp100	ENSMUST00000115433.3|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit 	ENSMUST00000003397.7|Ap1m2|ENSMUSG00000003309.7|adaptor protein complex AP-1, mu 2 subunit
mm10_v2_chr2_+_62664279_62664300	0.442023	Sp100	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr4_-_25800083_25800146	0.440714	Sp100	ENSMUST00000084770.4|Fut9|ENSMUSG00000055373.8|fucosyltransferase 9
mm10_v2_chr13_+_49653297_49653367	0.439945	Sp100	ENSMUST00000021824.7|Nol8|ENSMUSG00000021392.7|nucleolar protein 8
mm10_v2_chr11_-_78176619_78176675	0.434016	Sp100	ENSMUST00000148154.2|Nek8|ENSMUSG00000017405.8|NIMA (never in mitosis gene a)-related expressed kinase 8 	ENSMUST00000017549.6|Nek8|ENSMUSG00000017405.8|NIMA (never in mitosis gene a)-related expressed kinase 8
mm10_v2_chrM_+_7759_7927	0.418256	Sp100	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr8_-_86580664_86580686	0.418161	Sp100	ENSMUST00000131423.1|Abcc12|ENSMUSG00000036872.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 12 	ENSMUST00000152438.1|Abcc12|ENSMUSG00000036872.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 12
mm10_v2_chr1_+_183388981_183388981	0.412039	Sp100	ENSMUST00000097043.5|Taf1a|ENSMUSG00000072258.5|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, A
mm10_v2_chr11_-_11808923_11808967	0.409657	Sp100	ENSMUST00000109664.1|Fignl1|ENSMUSG00000035455.6|fidgetin-like 1 	ENSMUST00000150714.1|Fignl1|ENSMUSG00000035455.6|fidgetin-like 1 	ENSMUST00000047689.4|Fignl1|ENSMUSG00000035455.6|fidgetin-like 1 	ENSMUST00000171938.1|Fignl1|ENSMUSG00000035455.6|fidgetin-like 1 	ENSMUST00000171080.1|Fignl1|ENSMUSG00000035455.6|fidgetin-like 1
mm10_v2_chr1_-_24612700_24612700	0.404708	Sp100	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
mm10_v2_chrX_+_134059137_134059215	0.401961	Sp100	ENSMUST00000113287.1|Cstf2|ENSMUSG00000031256.5|cleavage stimulation factor, 3' pre-RNA subunit 2 	ENSMUST00000033609.2|Cstf2|ENSMUSG00000031256.5|cleavage stimulation factor, 3' pre-RNA subunit 2 	ENSMUST00000113286.1|Cstf2|ENSMUSG00000031256.5|cleavage stimulation factor, 3' pre-RNA subunit 2
mm10_v2_chr6_+_31398735_31398856	0.400775	Sp100	ENSMUST00000026699.8|Mkln1|ENSMUSG00000025609.9|muskelin 1, intracellular mediator containing kelch motifs
mm10_v2_chr14_+_20348159_20348244	0.399201	Sp100	ENSMUST00000090503.4|Fam149b|ENSMUSG00000039599.9|family with sequence similarity 149, member B 	ENSMUST00000090499.5|Fam149b|ENSMUSG00000039599.9|family with sequence similarity 149, member B 	ENSMUST00000037698.5|Fam149b|ENSMUSG00000039599.9|family with sequence similarity 149, member B 	ENSMUST00000051915.6|Fam149b|ENSMUSG00000039599.9|family with sequence similarity 149, member B
mm10_v2_chr9_+_3335470_3335501	0.390816	Sp100	ENSMUST00000053407.5|Alkbh8|ENSMUSG00000025899.7|alkB, alkylation repair homolog 8 (E. coli)
mm10_v2_chr2_+_164785994_164786071	0.378122	Sp100	ENSMUST00000152471.1|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21
mm10_v2_chr11_-_115276973_115277050	0.374874	Sp100	ENSMUST00000021078.2|Fdxr|ENSMUSG00000018861.2|ferredoxin reductase
mm10_v2_chr16_+_33380765_33380787	0.374404	Sp100	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr9_-_44440868_44440868	0.371802	Sp100	ENSMUST00000098837.1|Foxr1|ENSMUSG00000074397.3|forkhead box R1
mm10_v2_chr5_+_16553488_16553550	0.36991	Sp100	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr12_-_81421910_81421946	0.366757	Sp100	ENSMUST00000085319.3|Adam4|ENSMUSG00000072972.3|a disintegrin and metallopeptidase domain 4
mm10_v2_chr11_-_69900886_69900929	0.3631	Sp100	ENSMUST00000108621.2|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene 	ENSMUST00000100969.2|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr16_-_91597636_91597800	0.362226	Sp100	ENSMUST00000023686.8|Tmem50b|ENSMUSG00000022964.8|transmembrane protein 50B
mm10_v2_chr18_+_34624621_34624629	0.362189	Sp100	ENSMUST00000167161.1|Kif20a|ENSMUSG00000003779.9|kinesin family member 20A
mm10_v2_chr4_+_134923589_134923593	0.356911	Sp100	ENSMUST00000078084.6|D4Wsu53e|ENSMUSG00000037266.12|DNA segment, Chr 4, Wayne State University 53, expressed
mm10_v2_chr9_-_50739365_50739517	0.355202	Sp100	ENSMUST00000117093.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000121634.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr2_+_152736244_152736261	0.346392	Sp100	ENSMUST00000038368.8|Id1|ENSMUSG00000042745.9|inhibitor of DNA binding 1 	ENSMUST00000109824.1|Id1|ENSMUSG00000042745.9|inhibitor of DNA binding 1
mm10_v2_chrX_+_37126777_37126795	0.345079	Sp100	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr10_+_60399726_60399772	0.342659	Sp100	ENSMUST00000164428.1|Gm17455|ENSMUSG00000090439.1|predicted gene, 17455
mm10_v2_chr2_+_75659253_75659318	0.32928	Sp100	ENSMUST00000111964.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111962.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111961.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000164947.2|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000090792.4|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3
mm10_v2_chr6_-_29165003_29165008	0.320003	Sp100	ENSMUST00000007993.9|Rbm28|ENSMUSG00000029701.9|RNA binding motif protein 28
mm10_v2_chr12_+_65075582_65075617	0.317964	Sp100	ENSMUST00000058889.4|Fancm|ENSMUSG00000055884.7|Fanconi anemia, complementation group M
mm10_v2_chr1_-_63114255_63114345	0.314052	Sp100	ENSMUST00000153992.1|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D 	ENSMUST00000165066.1|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D 	ENSMUST00000172416.1|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D 	ENSMUST00000137511.1|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D
mm10_v2_chr4_+_21727726_21727790	0.313247	Sp100	ENSMUST00000102997.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000120679.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000108240.2|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr18_+_37513652_37513652	0.313159	Sp100	ENSMUST00000061405.4|Pcdhb21|ENSMUSG00000044022.4|protocadherin beta 21
mm10_v2_chr2_-_4141128_4141146	0.295853	Sp100	ENSMUST00000154360.1|1700080N15Rik|ENSMUSG00000084859.1|RIKEN cDNA 1700080N15 gene 	ENSMUST00000141488.1|1700080N15Rik|ENSMUSG00000084859.1|RIKEN cDNA 1700080N15 gene 	ENSMUST00000155091.1|1700080N15Rik|ENSMUSG00000084859.1|RIKEN cDNA 1700080N15 gene
mm10_v2_chr5_-_21785115_21785251	0.295349	Sp100	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chr6_+_52713729_52713800	0.284751	Sp100	ENSMUST00000080723.4|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000149588.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr13_+_55152640_55152640	0.265304	Sp100	ENSMUST00000005452.5|Fgfr4|ENSMUSG00000005320.9|fibroblast growth factor receptor 4
mm10_v2_chr8_+_117498272_117498291	0.26063	Sp100	ENSMUST00000081232.7|Plcg2|ENSMUSG00000034330.9|phospholipase C, gamma 2
mm10_v2_chr7_-_126502094_126502109	0.253485	Sp100	ENSMUST00000179818.1|Atxn2l|ENSMUSG00000032637.9|ataxin 2-like
mm10_v2_chr16_+_36875119_36875205	0.247818	Sp100	ENSMUST00000135406.1|Golgb1|ENSMUSG00000034243.10|golgi autoantigen, golgin subfamily b, macrogolgin 1 	ENSMUST00000023534.6|Golgb1|ENSMUSG00000078096.1|golgi autoantigen, golgin subfamily b, macrogolgin 1 	ENSMUST00000114812.1|Golgb1|ENSMUSG00000034243.10|golgi autoantigen, golgin subfamily b, macrogolgin 1 	ENSMUST00000134616.1|Golgb1|ENSMUSG00000034243.10|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm10_v2_chr4_+_11123950_11123980	0.246677	Sp100	ENSMUST00000142297.1|Gm11827|ENSMUSG00000086765.1|predicted gene 11827
mm10_v2_chr11_-_69900930_69900941	0.243555	Sp100	ENSMUST00000018714.6|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene 	ENSMUST00000128046.1|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr10_+_25359798_25359844	0.239725	Sp100	ENSMUST00000053748.8|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr13_-_23762378_23762391	0.236434	Sp100	ENSMUST00000091701.2|Hist1h3a|ENSMUSG00000069265.2|histone cluster 1, H3a
mm10_v2_chr9_-_88438898_88438936	0.23389	Sp100	ENSMUST00000173011.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14 	ENSMUST00000174806.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14
mm10_v2_chr19_+_48206025_48206163	0.22855	Sp100	ENSMUST00000078880.5|Sorcs3|ENSMUSG00000063434.5|sortilin-related VPS10 domain containing receptor 3
mm10_v2_chr3_-_158036630_158036647	0.22852	Sp100	ENSMUST00000121326.1|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr11_+_77686155_77686179	0.228097	Sp100	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr10_+_86705811_86705878	0.227541	Sp100	ENSMUST00000061458.7|BC030307|ENSMUSG00000044937.8|cDNA sequence BC030307 	ENSMUST00000075632.6|BC030307|ENSMUSG00000044937.8|cDNA sequence BC030307
mm10_v2_chr17_+_33524170_33524231	0.221127	Sp100	ENSMUST00000087623.6|Adamts10|ENSMUSG00000024299.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
mm10_v2_chr9_-_88438940_88438958	0.216823	Sp100	ENSMUST00000165315.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14 	ENSMUST00000173039.1|Snx14|ENSMUSG00000032422.11|sorting nexin 14
mm10_v2_chr8_+_114439655_114439710	0.212581	Sp100	ENSMUST00000004756.7|Wwox|ENSMUSG00000004637.9|WW domain-containing oxidoreductase 	ENSMUST00000109108.2|Wwox|ENSMUSG00000004637.9|WW domain-containing oxidoreductase 	ENSMUST00000160862.1|Wwox|ENSMUSG00000004637.9|WW domain-containing oxidoreductase 	ENSMUST00000109107.2|Wwox|ENSMUSG00000004637.9|WW domain-containing oxidoreductase
mm10_v2_chr5_+_122643878_122644009	0.212075	Sp100	ENSMUST00000100737.3|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000121489.1|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000031425.8|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000086247.5|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7
mm10_v2_chr5_+_108669271_108669322	0.209864	Sp100	ENSMUST00000119212.1|Idua|ENSMUSG00000033540.12|iduronidase, alpha-L-
mm10_v2_chr12_+_59013379_59013398	0.206501	Sp100	ENSMUST00000021379.7|Gemin2|ENSMUSG00000060121.9|gem (nuclear organelle) associated protein 2
mm10_v2_chr4_-_15945359_15945507	0.197453	Sp100	ENSMUST00000029877.8|Decr1|ENSMUSG00000028223.8|2,4-dienoyl CoA reductase 1, mitochondrial
mm10_v2_chr5_-_138272786_138272840	0.189665	Sp100	ENSMUST00000161279.1|Gal3st4|ENSMUSG00000075593.4|galactose-3-O-sulfotransferase 4 	ENSMUST00000161647.1|Gal3st4|ENSMUSG00000075593.4|galactose-3-O-sulfotransferase 4
mm10_v2_chr14_-_118923070_118923167	0.186595	Sp100	ENSMUST00000047208.5|Dzip1|ENSMUSG00000042156.9|DAZ interacting protein 1
mm10_v2_chr17_+_35841668_35841683	0.176697	Sp100	ENSMUST00000174124.1|Mdc1|ENSMUSG00000061607.8|mediator of DNA damage checkpoint 1
mm10_v2_chr14_+_50807915_50807946	0.163584	Sp100	ENSMUST00000036126.5|Parp2|ENSMUSG00000036023.5|poly (ADP-ribose) polymerase family, member 2
mm10_v2_chr19_-_27429807_27429870	0.156605	Sp100	ENSMUST00000076219.4|D19Bwg1357e|ENSMUSG00000041360.7|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
mm10_v2_chr2_+_71211706_71211794	0.14953	Sp100	ENSMUST00000112142.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112139.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112140.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112138.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2
mm10_v2_chr7_-_46672537_46672559	0.146677	Sp100	ENSMUST00000049298.7|Tph1|ENSMUSG00000040046.7|tryptophan hydroxylase 1
mm10_v2_chr8_-_27174623_27174651	0.146088	Sp100	ENSMUST00000033878.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I) 	ENSMUST00000054212.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I)
mm10_v2_chr2_+_4919004_4919038	0.143671	Sp100	ENSMUST00000027975.7|Phyh|ENSMUSG00000026664.7|phytanoyl-CoA hydroxylase
mm10_v2_chr13_-_22041352_22041363	0.138881	Sp100	ENSMUST00000102977.2|Hist1h4i|ENSMUSG00000060639.4|histone cluster 1, H4i
mm10_v2_chr14_+_65806066_65806232	0.136159	Sp100	ENSMUST00000139644.1|Pbk|ENSMUSG00000022033.3|PDZ binding kinase
mm10_v2_chr4_-_149698698_149698711	0.133701	Sp100	ENSMUST00000038859.7|Pik3cd|ENSMUSG00000039936.12|phosphatidylinositol 3-kinase catalytic delta polypeptide 	ENSMUST00000105690.2|Pik3cd|ENSMUSG00000039936.12|phosphatidylinositol 3-kinase catalytic delta polypeptide
mm10_v2_chr2_+_96318014_96318216	0.130745	Sp100	ENSMUST00000135431.1|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C 	ENSMUST00000162807.2|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C
mm10_v2_chr4_-_25281801_25281830	0.12677	Sp100	ENSMUST00000102994.3|Ufl1|ENSMUSG00000040359.8|UFM1 specific ligase 1
mm10_v2_chr2_+_71211828_71211839	0.122343	Sp100	ENSMUST00000081710.5|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2
mm10_v2_chr9_+_80165079_80165227	0.119593	Sp100	ENSMUST00000184480.1|Myo6|ENSMUSG00000033577.12|myosin VI
mm10_v2_chr13_-_108158584_108158630	0.119535	Sp100	ENSMUST00000163558.1|Ndufaf2|ENSMUSG00000068184.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2
mm10_v2_chr5_+_135168283_135168373	0.118017	Sp100	ENSMUST00000031692.5|Bcl7b|ENSMUSG00000029681.6|B cell CLL/lymphoma 7B
mm10_v2_chr16_-_17125106_17125146	0.115451	Sp100	ENSMUST00000093336.6|2610318N02Rik|ENSMUSG00000049916.9|RIKEN cDNA 2610318N02 gene
mm10_v2_chr1_-_106796609_106796669	0.114339	Sp100	ENSMUST00000112736.1|Vps4b|ENSMUSG00000009907.11|vacuolar protein sorting 4b (yeast)
mm10_v2_chr9_+_56418624_56418681	0.110138	Sp100	ENSMUST00000034879.3|Hmg20a|ENSMUSG00000032329.3|high mobility group 20A
mm10_v2_chr14_-_56778301_56778352	0.107761	Sp100	ENSMUST00000022507.5|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1 	ENSMUST00000163924.1|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1
mm10_v2_chr7_+_24904384_24904411	0.107123	Sp100	ENSMUST00000117419.1|Arhgef1|ENSMUSG00000040940.12|Rho guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr4_+_105157339_105157354	0.103165	Sp100	ENSMUST00000064139.7|Ppap2b|ENSMUSG00000028517.8|phosphatidic acid phosphatase type 2B
mm10_v2_chr2_+_71981184_71981287	0.100349	Sp100	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr6_-_57692007_57692084	0.0964	Sp100	ENSMUST00000185014.1|PYURF|ENSMUSG00000098753.1|protein preY, mitochondrial precursor  	ENSMUST00000053386.5|Pyurf|ENSMUSG00000043162.7|Pigy upstream reading frame
mm10_v2_chr7_-_28291130_28291186	0.0956292	Sp100	ENSMUST00000108316.2|BC089491|ENSMUSG00000046750.10|cDNA sequence BC089491 	ENSMUST00000056589.6|BC089491|ENSMUSG00000046750.10|cDNA sequence BC089491
mm10_v2_chr9_-_16378231_16378231	0.093946	Sp100	ENSMUST00000082170.5|Fat3|ENSMUSG00000074505.4|FAT tumor suppressor homolog 3 (Drosophila)
mm10_v2_chrX_-_56822308_56822346	0.0939001	Sp100	ENSMUST00000135542.1|Mtap7d3|ENSMUSG00000067878.7|MAP7 domain containing 3 	ENSMUST00000114766.1|Mtap7d3|ENSMUSG00000067878.7|MAP7 domain containing 3
mm10_v2_chr2_+_174330006_174330126	0.0867833	Sp100	ENSMUST00000109085.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000109087.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000109084.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr18_-_64516547_64516565	0.0838518	Sp100	ENSMUST00000025483.9|Nars|ENSMUSG00000024587.9|asparaginyl-tRNA synthetase
mm10_v2_chr2_+_136892168_136892241	0.0828241	Sp100	ENSMUST00000099311.2|Slx4ip|ENSMUSG00000027281.10|SLX4 interacting protein
mm10_v2_chr18_+_62977854_62977931	0.0788975	Sp100	ENSMUST00000150267.1|Napg|ENSMUSG00000024581.6|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm10_v2_chr13_+_17695409_17695436	0.0785502	Sp100	ENSMUST00000049744.3|Mplkip|ENSMUSG00000012429.8|M-phase specific PLK1 intereacting protein
mm10_v2_chr6_-_87672142_87672179	0.0784173	Sp100	ENSMUST00000032130.2|Aplf|ENSMUSG00000030051.4|aprataxin and PNKP like factor 	ENSMUST00000065997.2|Aplf|ENSMUSG00000030051.4|aprataxin and PNKP like factor
mm10_v2_chr12_+_98771018_98771041	0.0738911	Sp100	ENSMUST00000021399.7|Zc3h14|ENSMUSG00000021012.9|zinc finger CCCH type containing 14
mm10_v2_chr1_+_134709293_134709318	0.0724311	Sp100	ENSMUST00000121990.1|Syt2|ENSMUSG00000026452.9|synaptotagmin II
mm10_v2_chr10_+_80226644_80226752	0.0623146	Sp100	ENSMUST00000130260.1|Mum1|ENSMUSG00000020156.10|melanoma associated antigen (mutated) 1
mm10_v2_chr15_+_85859689_85859744	0.0609323	Sp100	ENSMUST00000170629.1|Gtse1|ENSMUSG00000022385.10|G two S phase expressed protein 1
mm10_v2_chr2_+_164785823_164785991	0.060493	Sp100	ENSMUST00000174070.1|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21 	ENSMUST00000172577.1|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21 	ENSMUST00000056181.6|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21
mm10_v2_chr13_+_77708683_77708740	0.0585601	Sp100	ENSMUST00000163257.1|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000091459.4|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000099358.3|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A
mm10_v2_chr11_-_62457772_62457835	0.0583412	Sp100	ENSMUST00000127471.2|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1
mm10_v2_chr13_+_23746734_23746763	0.0525833	Sp100	ENSMUST00000099703.2|Hist1h2bb|ENSMUSG00000075031.2|histone cluster 1, H2bb
mm10_v2_chr6_-_23132981_23132992	0.0509178	Sp100	ENSMUST00000031707.7|Aass|ENSMUSG00000029695.7|aminoadipate-semialdehyde synthase
mm10_v2_chrX_+_166440738_166440781	0.0505635	Sp100	ENSMUST00000112192.1|Trappc2|ENSMUSG00000079317.4|trafficking protein particle complex 2
mm10_v2_chr6_-_112696604_112696686	0.046543	Sp100	ENSMUST00000113182.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000113180.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000068487.5|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000077088.4|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae)
mm10_v2_chr2_+_24186469_24186484	0.044176	Sp100	ENSMUST00000057567.2|Il1f9|ENSMUSG00000044103.4|interleukin 1 family, member 9
mm10_v2_chr3_+_41024369_41024384	0.0392141	Sp100	ENSMUST00000099121.3|Larp1b|ENSMUSG00000025762.8|La ribonucleoprotein domain family, member 1B
mm10_v2_chr11_-_69900949_69901001	0.0390555	Sp100	ENSMUST00000102580.3|2810408A11Rik|ENSMUSG00000018570.11|RIKEN cDNA 2810408A11 gene
mm10_v2_chr18_-_23038656_23038676	0.0367135	Sp100	ENSMUST00000081423.6|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr4_-_126202757_126202762	0.0351375	Sp100	ENSMUST00000080919.5|Thrap3|ENSMUSG00000043962.10|thyroid hormone receptor associated protein 3
mm10_v2_chr13_+_23934434_23934462	0.0349368	Sp100	ENSMUST00000072391.1|Hist1h2aa|ENSMUSG00000060081.1|histone cluster 1, H2aa
mm10_v2_chr18_+_12128850_12128868	0.0329688	Sp100	ENSMUST00000025270.6|Riok3|ENSMUSG00000024404.6|RIO kinase 3
mm10_v2_chr7_-_30169701_30169766	0.0325756	Sp100	ENSMUST00000062181.7|Zfp146|ENSMUSG00000037029.7|zinc finger protein 146
mm10_v2_chrX_+_68678541_68678554	0.0301505	Sp100	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr1_-_106796687_106796728	0.0294276	Sp100	ENSMUST00000094646.5|Vps4b|ENSMUSG00000009907.11|vacuolar protein sorting 4b (yeast)
mm10_v2_chr2_-_74578875_74578954	0.026209	Sp100	ENSMUST00000134168.1|Lnp|ENSMUSG00000009207.9|limb and neural patterns 	ENSMUST00000111993.2|Lnp|ENSMUSG00000009207.9|limb and neural patterns 	ENSMUST00000064503.6|Lnp|ENSMUSG00000009207.9|limb and neural patterns
mm10_v2_chr5_-_124327883_124327972	0.0154886	Sp100	ENSMUST00000031344.6|Mphosph9|ENSMUSG00000038126.11|M-phase phosphoprotein 9
mm10_v2_chr16_-_56029696_56029739	0.012055	Sp100	ENSMUST00000122253.1|Pcnp|ENSMUSG00000071533.5|PEST proteolytic signal containing nuclear protein 	ENSMUST00000114444.2|Pcnp|ENSMUSG00000071533.5|PEST proteolytic signal containing nuclear protein
mm10_v2_chr14_-_20348040_20348121	0.00810619	Sp100	ENSMUST00000022344.2|Ecd|ENSMUSG00000021810.2|ecdysoneless homolog (Drosophila)
mm10_v2_chr9_+_80165013_80165055	0.00777357	Sp100	ENSMUST00000035889.8|Myo6|ENSMUSG00000033577.12|myosin VI 	ENSMUST00000113268.1|Myo6|ENSMUSG00000033577.12|myosin VI
mm10_v2_chr1_+_131962941_131962969	0.00723512	Sp100	ENSMUST00000177943.1|Slc45a3|ENSMUSG00000026435.9|solute carrier family 45, member 3
mm10_v2_chr2_-_168767136_168767201	0.00278928	Sp100	ENSMUST00000029061.5|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila) 	ENSMUST00000103074.1|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
