mm10_v2_chr11_-_75422586_75422701	0.473561	Zkscan3	ENSMUST00000138661.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1 	ENSMUST00000000769.7|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm10_v2_chr13_-_100786402_100786570	0.450052	Zkscan3	ENSMUST00000174038.1|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000091295.7|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000072119.8|Ccnb1|ENSMUSG00000041431.10|cyclin B1
mm10_v2_chr2_+_104095796_104095805	0.393244	Zkscan3	ENSMUST00000040423.5|Cd59a|ENSMUSG00000032679.6|CD59a antigen 	ENSMUST00000168176.1|Cd59a|ENSMUSG00000032679.6|CD59a antigen
mm10_v2_chr4_+_156026120_156026164	0.343845	Zkscan3	ENSMUST00000103173.3|Tnfrsf18|ENSMUSG00000041954.12|tumor necrosis factor receptor superfamily, member 18
mm10_v2_chr5_+_24985840_24985862	0.320612	Zkscan3	ENSMUST00000075081.6|1500035N22Rik|ENSMUSG00000059631.6|RIKEN cDNA 1500035N22 gene
mm10_v2_chr3_+_146500071_146500109	0.282527	Zkscan3	ENSMUST00000119130.1|Gng5|ENSMUSG00000068523.6|guanine nucleotide binding protein (G protein), gamma 5
mm10_v2_chr2_+_104069819_104069891	0.271909	Zkscan3	ENSMUST00000111131.2|Cd59b|ENSMUSG00000068686.6|CD59b antigen 	ENSMUST00000111132.1|Cd59b|ENSMUSG00000068686.6|CD59b antigen 	ENSMUST00000129749.1|Cd59b|ENSMUSG00000068686.6|CD59b antigen
mm10_v2_chr14_+_51893610_51893677	0.23598	Zkscan3	ENSMUST00000047726.5|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2 	ENSMUST00000161888.1|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2
mm10_v2_chr3_+_79629074_79629115	0.234979	Zkscan3	ENSMUST00000029388.8|4930579G24Rik|ENSMUSG00000027811.8|RIKEN cDNA 4930579G24 gene
mm10_v2_chr2_-_66634952_66634952	0.228788	Zkscan3	ENSMUST00000100064.2|Scn9a|ENSMUSG00000075316.5|sodium channel, voltage-gated, type IX, alpha 	ENSMUST00000100063.2|Scn9a|ENSMUSG00000075316.5|sodium channel, voltage-gated, type IX, alpha
mm10_v2_chrX_-_75874536_75874590	0.205211	Zkscan3	ENSMUST00000033547.7|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr12_+_69724939_69724986	0.189246	Zkscan3	ENSMUST00000021372.5|Atp5s|ENSMUSG00000054894.5|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s
mm10_v2_chr3_+_146499850_146499890	0.185043	Zkscan3	ENSMUST00000118280.1|Gng5|ENSMUSG00000068523.6|guanine nucleotide binding protein (G protein), gamma 5
mm10_v2_chr1_+_37997975_37998010	0.182447	Zkscan3	ENSMUST00000027252.7|Eif5b|ENSMUSG00000026083.7|eukaryotic translation initiation factor 5B
mm10_v2_chr15_-_3979432_3979573	0.181448	Zkscan3	ENSMUST00000022791.8|Fbxo4|ENSMUSG00000022184.8|F-box protein 4
mm10_v2_chr1_+_180942452_180942477	0.179262	Zkscan3	ENSMUST00000027800.8|Tmem63a|ENSMUSG00000026519.10|transmembrane protein 63a
mm10_v2_chrX_-_17571563_17571641	0.172781	Zkscan3	ENSMUST00000177213.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chrX_-_17572241_17572325	0.170739	Zkscan3	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr8_+_94810446_94810461	0.160612	Zkscan3	ENSMUST00000034232.1|Ccl17|ENSMUSG00000031780.1|chemokine (C-C motif) ligand 17
mm10_v2_chr13_-_19395728_19395789	0.159177	Zkscan3	ENSMUST00000039694.7|Stard3nl|ENSMUSG00000003062.8|STARD3 N-terminal like
mm10_v2_chr5_-_88675613_88675670	0.157756	Zkscan3	ENSMUST00000113234.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1 	ENSMUST00000153565.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1
mm10_v2_chr12_+_76533540_76533597	0.137822	Zkscan3	ENSMUST00000075249.4|Plekhg3|ENSMUSG00000052609.8|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm10_v2_chr8_+_33732237_33732339	0.136759	Zkscan3	ENSMUST00000171010.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr8_+_70616816_70616930	0.134043	Zkscan3	ENSMUST00000052437.3|Lrrc25|ENSMUSG00000049988.3|leucine rich repeat containing 25
mm10_v2_chr1_+_135232045_135232110	0.129392	Zkscan3	ENSMUST00000110798.3|Gm4204|ENSMUSG00000079139.3|predicted gene 4204
mm10_v2_chr6_+_125552948_125552980	0.119214	Zkscan3	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr7_+_101896340_101896431	0.117998	Zkscan3	ENSMUST00000035395.7|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000106973.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000144207.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr4_+_156026304_156026371	0.117648	Zkscan3	ENSMUST00000040274.7|Tnfrsf18|ENSMUSG00000041954.12|tumor necrosis factor receptor superfamily, member 18 	ENSMUST00000122001.1|Tnfrsf18|ENSMUSG00000041954.12|tumor necrosis factor receptor superfamily, member 18
mm10_v2_chr10_-_33951190_33951263	0.113116	Zkscan3	ENSMUST00000048222.4|Zufsp|ENSMUSG00000039531.7|zinc finger with UFM1-specific peptidase domain
mm10_v2_chr4_+_15957923_15958016	0.101392	Zkscan3	ENSMUST00000029879.8|Nbn|ENSMUSG00000028224.8|nibrin 	ENSMUST00000149069.1|Nbn|ENSMUSG00000028224.8|nibrin
mm10_v2_chr11_-_102365111_102365280	0.0966719	Zkscan3	ENSMUST00000006749.9|Slc4a1|ENSMUSG00000006574.9|solute carrier family 4 (anion exchanger), member 1
mm10_v2_chr2_+_121171155_121171198	0.0964597	Zkscan3	ENSMUST00000110658.1|Tubgcp4|ENSMUSG00000027263.6|tubulin, gamma complex associated protein 4
mm10_v2_chr13_-_38658991_38659038	0.0940269	Zkscan3	ENSMUST00000001757.7|Eef1e1|ENSMUSG00000001707.7|eukaryotic translation elongation factor 1 epsilon 1
mm10_v2_chr11_+_35769462_35769484	0.0918941	Zkscan3	ENSMUST00000018990.7|Pank3|ENSMUSG00000018846.8|pantothenate kinase 3
mm10_v2_chr3_-_95687846_95687917	0.0892081	Zkscan3	ENSMUST00000015994.3|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000148854.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000117782.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4
mm10_v2_chr7_-_81345189_81345254	0.0867965	Zkscan3	ENSMUST00000080813.4|Rps17|ENSMUSG00000061787.8|ribosomal protein S17
mm10_v2_chr4_+_63544747_63544772	0.0856276	Zkscan3	ENSMUST00000035301.6|Atp6v1g1|ENSMUSG00000039105.6|ATPase, H+ transporting, lysosomal V1 subunit G1
mm10_v2_chr8_+_31091593_31091650	0.0834208	Zkscan3	ENSMUST00000161713.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr7_+_126759601_126759651	0.0815436	Zkscan3	ENSMUST00000050201.4|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3 	ENSMUST00000057669.9|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3
mm10_v2_chr12_+_32954179_32954278	0.0787079	Zkscan3	ENSMUST00000020885.6|Sypl|ENSMUSG00000020570.8|synaptophysin-like protein
mm10_v2_chr12_-_69724830_69724885	0.0766001	Zkscan3	ENSMUST00000021370.8|L2hgdh|ENSMUSG00000020988.8|L-2-hydroxyglutarate dehydrogenase
mm10_v2_chr2_-_30194112_30194143	0.071234	Zkscan3	ENSMUST00000113659.1|Ccbl1|ENSMUSG00000039648.8|cysteine conjugate-beta lyase 1 	ENSMUST00000113660.1|Ccbl1|ENSMUSG00000039648.8|cysteine conjugate-beta lyase 1
mm10_v2_chr14_+_57424054_57424093	0.0666648	Zkscan3	ENSMUST00000122063.1|Ift88|ENSMUSG00000040040.10|intraflagellar transport 88
mm10_v2_chr11_-_100650693_100650749	0.0615243	Zkscan3	ENSMUST00000103119.3|Zfp385c|ENSMUSG00000014198.9|zinc finger protein 385C
mm10_v2_chr16_-_16359016_16359040	0.0614171	Zkscan3	ENSMUST00000023477.7|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000096229.3|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000115749.1|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like
mm10_v2_chr17_+_46110982_46111022	0.0613165	Zkscan3	ENSMUST00000024763.3|Mrps18a|ENSMUSG00000023967.3|mitochondrial ribosomal protein S18A 	ENSMUST00000123646.1|Mrps18a|ENSMUSG00000023967.3|mitochondrial ribosomal protein S18A
mm10_v2_chr7_-_127020321_127020336	0.059136	Zkscan3	ENSMUST00000032918.2|Pagr1a|ENSMUSG00000030680.3|PAXIP1 associated glutamate rich protein 1A
mm10_v2_chr2_+_156613664_156613706	0.0573101	Zkscan3	ENSMUST00000169464.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000109567.3|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr18_+_61105844_61105890	0.0555279	Zkscan3	ENSMUST00000115268.3|Csf1r|ENSMUSG00000024621.9|colony stimulating factor 1 receptor
mm10_v2_chr9_+_114688782_114688813	0.0531855	Zkscan3	ENSMUST00000047404.6|Dync1li1|ENSMUSG00000032435.8|dynein cytoplasmic 1 light intermediate chain 1
mm10_v2_chr2_+_121295437_121295486	0.0521143	Zkscan3	ENSMUST00000110639.1|Map1a|ENSMUSG00000027254.7|microtubule-associated protein 1 A
mm10_v2_chr4_+_139192899_139192941	0.0427218	Zkscan3	ENSMUST00000102508.3|Capzb|ENSMUSG00000028745.12|capping protein (actin filament) muscle Z-line, beta 	ENSMUST00000131912.1|Capzb|ENSMUSG00000028745.12|capping protein (actin filament) muscle Z-line, beta 	ENSMUST00000102507.3|Capzb|ENSMUSG00000028745.12|capping protein (actin filament) muscle Z-line, beta
mm10_v2_chr1_+_58795371_58795447	0.0413126	Zkscan3	ENSMUST00000027189.8|Casp8|ENSMUSG00000026029.8|caspase 8
mm10_v2_chr2_+_31670714_31670741	0.0412726	Zkscan3	ENSMUST00000038474.7|Exosc2|ENSMUSG00000039356.9|exosome component 2 	ENSMUST00000137156.1|Exosc2|ENSMUSG00000039356.9|exosome component 2
mm10_v2_chr3_-_63929376_63929472	0.03676	Zkscan3	ENSMUST00000061706.6|E130311K13Rik|ENSMUSG00000048581.6|RIKEN cDNA E130311K13 gene
mm10_v2_chr1_+_132298606_132298631	0.036173	Zkscan3	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr2_+_121171204_121171279	0.0315251	Zkscan3	ENSMUST00000039541.5|Tubgcp4|ENSMUSG00000027263.6|tubulin, gamma complex associated protein 4 	ENSMUST00000110657.1|Tubgcp4|ENSMUSG00000027263.6|tubulin, gamma complex associated protein 4
mm10_v2_chr6_-_122856151_122856163	0.0293256	Zkscan3	ENSMUST00000042081.8|C3ar1|ENSMUSG00000040552.8|complement component 3a receptor 1
mm10_v2_chr8_+_71396853_71396891	0.0292692	Zkscan3	ENSMUST00000002473.8|Babam1|ENSMUSG00000031820.8|BRISC and BRCA1 A complex member 1
mm10_v2_chr13_+_104109737_104109746	0.0265549	Zkscan3	ENSMUST00000044385.7|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm10_v2_chr1_-_173333503_173333520	0.0177518	Zkscan3	ENSMUST00000038227.4|Darc|ENSMUSG00000037872.4|Duffy blood group, chemokine receptor
mm10_v2_chr13_+_44730726_44730838	0.0158679	Zkscan3	ENSMUST00000173704.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000044608.7|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000173367.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr2_+_32646586_32646602	0.0143746	Zkscan3	ENSMUST00000009705.7|Eng|ENSMUSG00000026814.10|endoglin 	ENSMUST00000167841.1|Eng|ENSMUSG00000026814.10|endoglin
mm10_v2_chr8_+_106893616_106893696	0.0115952	Zkscan3	ENSMUST00000047629.5|Cirh1a|ENSMUSG00000041438.7|cirrhosis, autosomal recessive 1A (human)
mm10_v2_chr17_-_35673517_35673700	0.0114999	Zkscan3	ENSMUST00000162266.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000160734.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000159852.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000160039.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chr10_+_89744988_89745022	0.00836331	Zkscan3	ENSMUST00000020112.5|Uhrf1bp1l|ENSMUSG00000019951.9|UHRF1 (ICBP90) binding protein 1-like
mm10_v2_chr4_-_155863362_155863362	0.00373199	Zkscan3	ENSMUST00000030949.3|Tas1r3|ENSMUSG00000029072.3|taste receptor, type 1, member 3
