mm10_v2_chr2_+_164769892_164769903	4.04673	Clock	ENSMUST00000088248.6|Ube2c|ENSMUSG00000001403.7|ubiquitin-conjugating enzyme E2C 	ENSMUST00000001439.6|Ube2c|ENSMUSG00000001403.7|ubiquitin-conjugating enzyme E2C
mm10_v2_chr16_+_32608973_32608990	3.29779	Clock	ENSMUST00000120680.1|Tfrc|ENSMUSG00000022797.9|transferrin receptor
mm10_v2_chr5_+_139543889_139543904	3.26536	Clock	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr7_-_144939823_144939869	2.98672	Clock	ENSMUST00000093962.4|Ccnd1|ENSMUSG00000070348.4|cyclin D1
mm10_v2_chr12_+_59131473_59131502	2.95431	Clock	ENSMUST00000177162.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr12_+_59131286_59131469	2.89206	Clock	ENSMUST00000176464.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000170992.2|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000176322.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr1_-_75219245_75219262	2.80615	Clock	ENSMUST00000079464.6|Tuba4a|ENSMUSG00000026202.7|tubulin, alpha 4A
mm10_v2_chr4_-_97778042_97778071	2.75606	Clock	ENSMUST00000146447.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr2_+_160645881_160645896	2.71703	Clock	ENSMUST00000109468.2|Top1|ENSMUSG00000070544.6|topoisomerase (DNA) I
mm10_v2_chr11_-_100759942_100760011	2.63747	Clock	ENSMUST00000107363.2|Kcnh4|ENSMUSG00000035355.9|potassium voltage-gated channel, subfamily H (eag-related), member 4
mm10_v2_chr1_-_12991109_12991177	2.44143	Clock	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr8_+_90828820_90828842	2.41528	Clock	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr11_-_100759740_100759754	2.37329	Clock	ENSMUST00000107361.2|Kcnh4|ENSMUSG00000035355.9|potassium voltage-gated channel, subfamily H (eag-related), member 4
mm10_v2_chr17_-_90455872_90456026	2.34072	Clock	ENSMUST00000174337.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000172466.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr1_-_82291370_82291416	2.32321	Clock	ENSMUST00000069799.2|Irs1|ENSMUSG00000055980.2|insulin receptor substrate 1
mm10_v2_chr6_-_49214954_49215022	2.18354	Clock	ENSMUST00000031838.7|Igf2bp3|ENSMUSG00000029814.8|insulin-like growth factor 2 mRNA binding protein 3
mm10_v2_chr2_+_83644435_83644490	2.16202	Clock	ENSMUST00000081591.6|Zc3h15|ENSMUSG00000027091.8|zinc finger CCCH-type containing 15
mm10_v2_chr15_-_10714612_10714637	2.07278	Clock	ENSMUST00000169385.1|Rai14|ENSMUSG00000022246.7|retinoic acid induced 14
mm10_v2_chr5_+_93093428_93093457	2.02746	Clock	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr1_+_59684949_59685023	2.0016	Clock	ENSMUST00000027174.3|Nop58|ENSMUSG00000026020.3|NOP58 ribonucleoprotein
mm10_v2_chr5_+_146231211_146231385	1.99992	Clock	ENSMUST00000161181.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000161652.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000031640.8|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000159467.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8
mm10_v2_chr14_-_20181773_20181790	1.94237	Clock	ENSMUST00000024011.8|Kcnk5|ENSMUSG00000023243.8|potassium channel, subfamily K, member 5
mm10_v2_chr4_-_133756769_133756794	1.7904	Clock	ENSMUST00000008024.6|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like)
mm10_v2_chr8_+_58912257_58912257	1.7676	Clock	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr4_-_97584605_97584610	1.74776	Clock	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr4_-_97584612_97584643	1.71917	Clock	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr16_+_43889896_43889930	1.64315	Clock	ENSMUST00000122014.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene 	ENSMUST00000178400.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr12_+_71136848_71136848	1.58626	Clock	ENSMUST00000149564.1|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene 	ENSMUST00000045907.8|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene
mm10_v2_chr4_+_44756609_44756682	1.50769	Clock	ENSMUST00000143385.1|Zcchc7|ENSMUSG00000035649.11|zinc finger, CCHC domain containing 7
mm10_v2_chr19_-_29812952_29812974	1.48747	Clock	ENSMUST00000099525.3|Ranbp6|ENSMUSG00000074909.3|RAN binding protein 6
mm10_v2_chr17_-_35000848_35000958	1.48669	Clock	ENSMUST00000166828.3|D17H6S56E-5|ENSMUSG00000091747.3|DNA segment, Chr 17, human D6S56E 5
mm10_v2_chr4_+_44756553_44756601	1.4695	Clock	ENSMUST00000107824.2|Zcchc7|ENSMUSG00000035649.11|zinc finger, CCHC domain containing 7
mm10_v2_chr16_+_43889800_43889820	1.46818	Clock	ENSMUST00000132859.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr5_-_76951560_76951589	1.45516	Clock	ENSMUST00000140076.1|Ppat|ENSMUSG00000029246.8|phosphoribosyl pyrophosphate amidotransferase
mm10_v2_chr3_+_41564880_41564933	1.36094	Clock	ENSMUST00000168086.1|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr2_+_18055203_18055237	1.31184	Clock	ENSMUST00000028076.8|Mllt10|ENSMUSG00000026743.10|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm10_v2_chr16_+_43889936_43889947	1.30668	Clock	ENSMUST00000151183.1|2610015P09Rik|ENSMUSG00000022701.11|RIKEN cDNA 2610015P09 gene
mm10_v2_chr5_-_45857473_45857615	1.30632	Clock	ENSMUST00000016026.7|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like 	ENSMUST00000067997.6|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like 	ENSMUST00000045586.6|Lcorl|ENSMUSG00000015882.11|ligand dependent nuclear receptor corepressor-like
mm10_v2_chr11_-_51756378_51756618	1.3061	Clock	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
mm10_v2_chr10_+_36974558_36974579	1.27648	Clock	ENSMUST00000105510.1|Hdac2|ENSMUSG00000019777.10|histone deacetylase 2
mm10_v2_chr10_+_22158566_22158586	1.26771	Clock	ENSMUST00000181645.1|Raet1e|ENSMUSG00000053219.9|retinoic acid early transcript 1E 	ENSMUST00000105522.2|H60b|ENSMUSG00000075297.4|histocompatibility 60b
mm10_v2_chr6_-_47813512_47813528	1.20858	Clock	ENSMUST00000077290.7|Pdia4|ENSMUSG00000025823.8|protein disulfide isomerase associated 4
mm10_v2_chr19_-_29805507_29805507	1.19306	Clock	ENSMUST00000175726.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr15_+_39076885_39076938	1.18334	Clock	ENSMUST00000067072.3|Cthrc1|ENSMUSG00000054196.6|collagen triple helix repeat containing 1
mm10_v2_chr11_+_106789235_106789335	1.1312	Clock	ENSMUST00000103068.3|Cep95|ENSMUSG00000018372.7|centrosomal protein 95 	ENSMUST00000018516.4|Cep95|ENSMUSG00000018372.7|centrosomal protein 95
mm10_v2_chr3_-_95882193_95882231	1.12686	Clock	ENSMUST00000159863.1|Gm129|ENSMUSG00000038550.4|predicted gene 129 	ENSMUST00000159739.1|Gm129|ENSMUSG00000038550.4|predicted gene 129 	ENSMUST00000036418.3|Gm129|ENSMUSG00000038550.4|predicted gene 129
mm10_v2_chr17_-_35000746_35000801	1.10156	Clock	ENSMUST00000163360.1|D17H6S56E-5|ENSMUSG00000091747.3|DNA segment, Chr 17, human D6S56E 5
mm10_v2_chr15_+_72913357_72913357	1.02803	Clock	ENSMUST00000166418.2|Gm3150|ENSMUSG00000096173.1|predicted gene 3150
mm10_v2_chrX_+_36328353_36328418	0.984769	Clock	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr4_+_97777780_97777834	0.975682	Clock	ENSMUST00000107062.2|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000052018.5|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000107057.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr1_-_52499980_52499980	0.972252	Clock	ENSMUST00000164747.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr9_+_58134017_58134075	0.951349	Clock	ENSMUST00000134955.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000147134.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000170397.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr13_-_75943812_75943950	0.950886	Clock	ENSMUST00000022078.5|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3 	ENSMUST00000109606.1|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3
mm10_v2_chr11_-_106216318_106216363	0.948066	Clock	ENSMUST00000002043.3|Ccdc47|ENSMUSG00000078622.2|coiled-coil domain containing 47
mm10_v2_chr11_-_106789157_106789192	0.921625	Clock	ENSMUST00000129585.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr3_-_95882232_95882251	0.89797	Clock	ENSMUST00000161866.1|Gm129|ENSMUSG00000038550.4|predicted gene 129
mm10_v2_chr4_+_21848039_21848077	0.897529	Clock	ENSMUST00000098238.2|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18 	ENSMUST00000108229.1|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18
mm10_v2_chr4_+_32657107_32657166	0.884751	Clock	ENSMUST00000071642.4|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast) 	ENSMUST00000178134.1|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast)
mm10_v2_chrX_-_95444789_95444872	0.876732	Clock	ENSMUST00000084535.5|Amer1|ENSMUSG00000050332.7|APC membrane recruitment 1
mm10_v2_chr6_+_125096145_125096162	0.87179	Clock	ENSMUST00000112390.1|Chd4|ENSMUSG00000063870.6|chromodomain helicase DNA binding protein 4
mm10_v2_chr10_+_36974536_36974556	0.869973	Clock	ENSMUST00000019911.7|Hdac2|ENSMUSG00000019777.10|histone deacetylase 2
mm10_v2_chr10_+_17723220_17723229	0.868047	Clock	ENSMUST00000038107.7|Cited2|ENSMUSG00000039910.9|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
mm10_v2_chr11_+_101316200_101316275	0.859535	Clock	ENSMUST00000142640.1|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) 	ENSMUST00000019470.7|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm10_v2_chr18_+_42511496_42511521	0.858281	Clock	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr9_-_106891401_106891438	0.828399	Clock	ENSMUST00000069036.7|Manf|ENSMUSG00000032575.10|mesencephalic astrocyte-derived neurotrophic factor
mm10_v2_chr12_+_69372112_69372172	0.828289	Clock	ENSMUST00000050063.7|Arf6|ENSMUSG00000044147.7|ADP-ribosylation factor 6
mm10_v2_chr2_-_130906338_130906406	0.798661	Clock	ENSMUST00000146975.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene
mm10_v2_chr4_+_107968332_107968424	0.787908	Clock	ENSMUST00000106713.3|Slc1a7|ENSMUSG00000008932.9|solute carrier family 1 (glutamate transporter), member 7
mm10_v2_chr11_+_101316917_101316977	0.760289	Clock	ENSMUST00000151385.1|Psme3|ENSMUSG00000078652.3|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm10_v2_chr11_-_106788845_106788883	0.759597	Clock	ENSMUST00000123339.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr11_-_47379405_47379522	0.755553	Clock	ENSMUST00000077221.5|Sgcd|ENSMUSG00000020354.9|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm10_v2_chr4_-_132075250_132075292	0.753926	Clock	ENSMUST00000105970.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000105975.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr10_-_127522428_127522454	0.735007	Clock	ENSMUST00000026470.4|Shmt2|ENSMUSG00000025403.4|serine hydroxymethyltransferase 2 (mitochondrial)
mm10_v2_chr1_-_55088156_55088243	0.70806	Clock	ENSMUST00000127861.1|Hspd1|ENSMUSG00000025980.8|heat shock protein 1 (chaperonin) 	ENSMUST00000144077.1|Hspd1|ENSMUSG00000025980.8|heat shock protein 1 (chaperonin)
mm10_v2_chr1_-_55088024_55088102	0.677848	Clock	ENSMUST00000027123.8|Hspd1|ENSMUSG00000025980.8|heat shock protein 1 (chaperonin)
mm10_v2_chr5_-_74702891_74702914	0.675187	Clock	ENSMUST00000117388.1|Lnx1|ENSMUSG00000029228.9|ligand of numb-protein X 1
mm10_v2_chr9_-_110654161_110654212	0.673691	Clock	ENSMUST00000133191.1|Nbeal2|ENSMUSG00000056724.8|neurobeachin-like 2 	ENSMUST00000167320.1|Nbeal2|ENSMUSG00000056724.8|neurobeachin-like 2
mm10_v2_chr9_-_114781986_114781998	0.673613	Clock	ENSMUST00000035009.8|Cmtm7|ENSMUSG00000032436.10|CKLF-like MARVEL transmembrane domain containing 7 	ENSMUST00000084867.7|Cmtm7|ENSMUSG00000032436.10|CKLF-like MARVEL transmembrane domain containing 7
mm10_v2_chr11_+_74830920_74831005	0.651725	Clock	ENSMUST00000000291.2|Mnt|ENSMUSG00000000282.6|max binding protein
mm10_v2_chr6_-_23839137_23839267	0.648871	Clock	ENSMUST00000166458.2|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000142913.2|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000115357.1|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000069074.7|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000115361.2|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000018122.7|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000115355.1|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2 	ENSMUST00000115356.2|Cadps2|ENSMUSG00000017978.12|Ca2+-dependent activator protein for secretion 2
mm10_v2_chr12_+_16653470_16653486	0.643679	Clock	ENSMUST00000111064.1|Ntsr2|ENSMUSG00000020591.10|neurotensin receptor 2
mm10_v2_chr4_-_82705735_82705754	0.643238	Clock	ENSMUST00000155821.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr16_-_43889669_43889685	0.639418	Clock	ENSMUST00000023387.7|Qtrtd1|ENSMUSG00000022704.9|queuine tRNA-ribosyltransferase domain containing 1
mm10_v2_chr19_+_45015168_45015187	0.635536	Clock	ENSMUST00000039016.6|Lzts2|ENSMUSG00000035342.7|leucine zipper, putative tumor suppressor 2
mm10_v2_chr4_-_57143437_57143624	0.633519	Clock	ENSMUST00000095076.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b 	ENSMUST00000030142.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b
mm10_v2_chr10_+_69534039_69534070	0.630037	Clock	ENSMUST00000182557.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr11_+_17211912_17211964	0.623984	Clock	ENSMUST00000046955.6|Wdr92|ENSMUSG00000078970.5|WD repeat domain 92
mm10_v2_chr7_+_46796088_46796134	0.621522	Clock	ENSMUST00000006774.4|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1 	ENSMUST00000165031.1|Gtf2h1|ENSMUSG00000006599.7|general transcription factor II H, polypeptide 1
mm10_v2_chr12_-_31950170_31950197	0.610295	Clock	ENSMUST00000176520.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr14_-_118706180_118706234	0.594823	Clock	ENSMUST00000036554.6|Abcc4|ENSMUSG00000032849.7|ATP-binding cassette, sub-family C (CFTR/MRP), member 4 	ENSMUST00000166646.1|Abcc4|ENSMUSG00000032849.7|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm10_v2_chr9_-_48480540_48480640	0.554837	Clock	ENSMUST00000034524.3|Rexo2|ENSMUSG00000032026.6|REX2, RNA exonuclease 2 homolog (S. cerevisiae)
mm10_v2_chr11_+_94629741_94629834	0.53743	Clock	ENSMUST00000021239.6|Lrrc59|ENSMUSG00000020869.8|leucine rich repeat containing 59
mm10_v2_chr9_+_44326804_44326896	0.536319	Clock	ENSMUST00000054708.3|Dpagt1|ENSMUSG00000032123.4|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm10_v2_chr12_-_31950210_31950246	0.521659	Clock	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr7_-_46795881_46796085	0.506866	Clock	ENSMUST00000107653.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000107654.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000014562.7|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human) 	ENSMUST00000152759.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human)
mm10_v2_chr4_-_124693568_124693606	0.505823	Clock	ENSMUST00000030738.7|Utp11l|ENSMUSG00000028907.7|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm10_v2_chr2_-_38926217_38926454	0.505114	Clock	ENSMUST00000076275.4|Nr6a1|ENSMUSG00000063972.7|nuclear receptor subfamily 6, group A, member 1 	ENSMUST00000142130.1|Nr6a1|ENSMUSG00000063972.7|nuclear receptor subfamily 6, group A, member 1
mm10_v2_chr7_-_46795661_46795722	0.50444	Clock	ENSMUST00000123725.1|Hps5|ENSMUSG00000014418.9|Hermansky-Pudlak syndrome 5 homolog (human)
mm10_v2_chr9_+_58134535_58134810	0.496357	Clock	ENSMUST00000128378.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000150820.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000167479.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6 	ENSMUST00000134450.1|Stra6|ENSMUSG00000032327.8|stimulated by retinoic acid gene 6
mm10_v2_chr18_+_76241580_76241741	0.495984	Clock	ENSMUST00000168423.1|Smad2|ENSMUSG00000024563.9|SMAD family member 2 	ENSMUST00000091831.6|Smad2|ENSMUSG00000024563.9|SMAD family member 2
mm10_v2_chr11_+_106216926_106216968	0.494647	Clock	ENSMUST00000021046.5|Ddx42|ENSMUSG00000020705.6|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
mm10_v2_chr3_+_88532314_88532396	0.490824	Clock	ENSMUST00000172699.1|Mex3a|ENSMUSG00000074480.4|mex3 homolog A (C. elegans)
mm10_v2_chr15_-_38078842_38078860	0.488487	Clock	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chr4_+_123282778_123282911	0.455754	Clock	ENSMUST00000106243.1|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4 	ENSMUST00000106241.1|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4 	ENSMUST00000080178.6|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4
mm10_v2_chr5_+_76951307_76951368	0.444712	Clock	ENSMUST00000031160.9|Paics|ENSMUSG00000029247.11|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase 	ENSMUST00000120912.1|Paics|ENSMUSG00000029247.11|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase 	ENSMUST00000117536.1|Paics|ENSMUSG00000029247.11|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm10_v2_chr11_-_99089296_99089318	0.417073	Clock	ENSMUST00000017751.2|Tns4|ENSMUSG00000017607.3|tensin 4
mm10_v2_chr16_+_94085226_94085260	0.414243	Clock	ENSMUST00000072182.7|Sim2|ENSMUSG00000062713.7|single-minded homolog 2 (Drosophila)
mm10_v2_chr4_+_132274385_132274433	0.405963	Clock	ENSMUST00000105963.1|Taf12|ENSMUSG00000028899.5|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr9_-_57606234_57606281	0.395003	Clock	ENSMUST00000045068.8|Cplx3|ENSMUSG00000039714.8|complexin 3
mm10_v2_chr4_+_57568144_57568160	0.394612	Clock	ENSMUST00000102904.3|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chr5_+_76974683_76974727	0.394303	Clock	ENSMUST00000101087.3|Srp72|ENSMUSG00000036323.8|signal recognition particle 72 	ENSMUST00000120550.1|Srp72|ENSMUSG00000036323.8|signal recognition particle 72
mm10_v2_chr11_-_52000432_52000484	0.384528	Clock	ENSMUST00000020657.6|Ube2b|ENSMUSG00000020390.6|ubiquitin-conjugating enzyme E2B
mm10_v2_chr3_+_145576196_145576266	0.367959	Clock	ENSMUST00000098534.4|Znhit6|ENSMUSG00000074182.4|zinc finger, HIT type 6
mm10_v2_chr12_-_31950535_31950560	0.361407	Clock	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr12_+_8674681_8674765	0.359022	Clock	ENSMUST00000168361.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000169750.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000163730.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr11_-_17211504_17211573	0.335491	Clock	ENSMUST00000020317.7|Pno1|ENSMUSG00000020116.7|partner of NOB1 homolog (S. cerevisiae)
mm10_v2_chrX_-_36864238_36864246	0.335318	Clock	ENSMUST00000115249.3|C330007P06Rik|ENSMUSG00000006423.9|RIKEN cDNA C330007P06 gene 	ENSMUST00000115248.3|C330007P06Rik|ENSMUSG00000006423.9|RIKEN cDNA C330007P06 gene
mm10_v2_chr4_-_155863362_155863362	0.323928	Clock	ENSMUST00000030949.3|Tas1r3|ENSMUSG00000029072.3|taste receptor, type 1, member 3
mm10_v2_chr19_+_6975048_6975071	0.315336	Clock	ENSMUST00000070850.6|Ppp1r14b|ENSMUSG00000056612.6|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm10_v2_chr1_-_166409773_166409863	0.310076	Clock	ENSMUST00000135673.1|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000079972.6|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000169324.1|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000111411.2|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000128861.1|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain
mm10_v2_chr17_-_87265866_87265935	0.288387	Clock	ENSMUST00000145895.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000129616.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000155904.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000151155.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000144236.1|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2 	ENSMUST00000024963.3|Mcfd2|ENSMUSG00000024150.5|multiple coagulation factor deficiency 2
mm10_v2_chr11_+_74649462_74649520	0.287519	Clock	ENSMUST00000092915.5|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog 	ENSMUST00000117818.1|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog
mm10_v2_chr10_+_44268328_44268379	0.283846	Clock	ENSMUST00000039286.4|Atg5|ENSMUSG00000038160.6|autophagy related 5
mm10_v2_chr4_+_132274369_132274383	0.282081	Clock	ENSMUST00000030731.4|Taf12|ENSMUSG00000028899.5|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chrX_+_6047453_6047453	0.270717	Clock	ENSMUST00000103007.3|Nudt11|ENSMUSG00000073295.4|nudix (nucleoside diphosphate linked moiety X)-type motif 11
mm10_v2_chr12_+_90738201_90738226	0.260485	Clock	ENSMUST00000181874.1|Gm26512|ENSMUSG00000097157.1|predicted gene, 26512
mm10_v2_chr3_-_108210438_108210502	0.255303	Clock	ENSMUST00000117784.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2 	ENSMUST00000119650.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2 	ENSMUST00000117409.1|Atxn7l2|ENSMUSG00000048997.11|ataxin 7-like 2
mm10_v2_chr19_+_41981709_41981778	0.243258	Clock	ENSMUST00000026170.1|Ubtd1|ENSMUSG00000025171.1|ubiquitin domain containing 1
mm10_v2_chr2_+_115581667_115581743	0.215022	Clock	ENSMUST00000166472.1|BC052040|ENSMUSG00000040282.7|cDNA sequence BC052040 	ENSMUST00000110918.2|BC052040|ENSMUSG00000040282.7|cDNA sequence BC052040
mm10_v2_chr17_-_45573253_45573272	0.2138	Clock	ENSMUST00000165127.1|Hsp90ab1|ENSMUSG00000023944.8|heat shock protein 90 alpha (cytosolic), class B member 1 	ENSMUST00000166469.1|Hsp90ab1|ENSMUSG00000023944.8|heat shock protein 90 alpha (cytosolic), class B member 1 	ENSMUST00000024739.7|Hsp90ab1|ENSMUSG00000023944.8|heat shock protein 90 alpha (cytosolic), class B member 1
mm10_v2_chr4_-_11386757_11386783	0.20842	Clock	ENSMUST00000108313.1|Esrp1|ENSMUSG00000040728.9|epithelial splicing regulatory protein 1 	ENSMUST00000108311.2|Esrp1|ENSMUSG00000040728.9|epithelial splicing regulatory protein 1
mm10_v2_chr15_-_43170809_43170834	0.167979	Clock	ENSMUST00000063492.6|Rspo2|ENSMUSG00000051920.6|R-spondin 2 homolog (Xenopus laevis)
mm10_v2_chrX_-_7572843_7572858	0.167541	Clock	ENSMUST00000132788.1|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F
mm10_v2_chr9_+_95637601_95637632	0.150311	Clock	ENSMUST00000015498.8|Pcolce2|ENSMUSG00000015354.8|procollagen C-endopeptidase enhancer 2
mm10_v2_chr11_+_78178651_78178772	0.137072	Clock	ENSMUST00000092880.7|Tlcd1|ENSMUSG00000019437.11|TLC domain containing 1 	ENSMUST00000127587.1|Tlcd1|ENSMUSG00000019437.11|TLC domain containing 1 	ENSMUST00000108338.1|Tlcd1|ENSMUSG00000019437.11|TLC domain containing 1
mm10_v2_chr1_-_186705980_186705999	0.130636	Clock	ENSMUST00000045288.8|Tgfb2|ENSMUSG00000039239.9|transforming growth factor, beta 2
mm10_v2_chr8_-_45999860_45999873	0.12543	Clock	ENSMUST00000053558.9|Ankrd37|ENSMUSG00000050914.9|ankyrin repeat domain 37
mm10_v2_chr18_+_32837225_32837240	0.125329	Clock	ENSMUST00000166214.1|Wdr36|ENSMUSG00000038299.9|WD repeat domain 36 	ENSMUST00000053663.9|Wdr36|ENSMUSG00000038299.9|WD repeat domain 36
mm10_v2_chr16_+_4036942_4037103	0.113032	Clock	ENSMUST00000137748.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000006136.4|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000157044.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000120009.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I
mm10_v2_chr8_+_123186235_123186262	0.112516	Clock	ENSMUST00000019422.4|Dpep1|ENSMUSG00000019278.4|dipeptidase 1 (renal)
mm10_v2_chr11_-_76217490_76217664	0.102235	Clock	ENSMUST00000102500.4|Gemin4|ENSMUSG00000049396.6|gem (nuclear organelle) associated protein 4
mm10_v2_chr5_+_76951382_76951394	0.095589	Clock	ENSMUST00000141687.1|Paics|ENSMUSG00000029247.11|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm10_v2_chr11_-_52000748_52000775	0.0928212	Clock	ENSMUST00000109086.1|Ube2b|ENSMUSG00000020390.6|ubiquitin-conjugating enzyme E2B
mm10_v2_chr11_-_72215592_72215592	0.0815469	Clock	ENSMUST00000021157.8|Med31|ENSMUSG00000020801.8|mediator of RNA polymerase II transcription, subunit 31 homolog (yeast)
mm10_v2_chr9_+_44067072_44067134	0.077859	Clock	ENSMUST00000177054.1|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr13_-_100015562_100015647	0.0767152	Clock	ENSMUST00000022148.6|Mccc2|ENSMUSG00000021646.8|methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
mm10_v2_chr9_+_40801235_40801302	0.0627708	Clock	ENSMUST00000117870.1|Hspa8|ENSMUSG00000015656.10|heat shock protein 8 	ENSMUST00000117557.1|Hspa8|ENSMUSG00000015656.10|heat shock protein 8
mm10_v2_chr3_-_108085346_108085412	0.0578602	Clock	ENSMUST00000078912.5|Ampd2|ENSMUSG00000027889.11|adenosine monophosphate deaminase 2
mm10_v2_chr14_-_89898466_89898466	0.0569847	Clock	ENSMUST00000081204.4|Gm10110|ENSMUSG00000062093.4|predicted gene 10110
mm10_v2_chr11_+_102189620_102189734	0.0419095	Clock	ENSMUST00000070334.3|G6pc3|ENSMUSG00000034793.9|glucose 6 phosphatase, catalytic, 3 	ENSMUST00000078975.7|G6pc3|ENSMUSG00000034793.9|glucose 6 phosphatase, catalytic, 3
mm10_v2_chr4_-_148444744_148444783	0.0145691	Clock	ENSMUST00000051633.2|Ubiad1|ENSMUSG00000047719.2|UbiA prenyltransferase domain containing 1
mm10_v2_chr7_-_126695731_126695788	0.011346	Clock	ENSMUST00000144897.1|Slx1b|ENSMUSG00000059772.6|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
mm10_v2_chr2_-_147186389_147186413	0.0110398	Clock	ENSMUST00000109970.3|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2 	ENSMUST00000067075.5|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2
mm10_v2_chr5_-_22344690_22344710	0.00539554	Clock	ENSMUST00000062372.7|Reln|ENSMUSG00000042453.8|reelin 	ENSMUST00000161356.1|Reln|ENSMUSG00000042453.8|reelin
