mm10_v2_chr4_+_74013442_74013674	6.26067	Crx_Gsc	ENSMUST00000098006.2|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3 	ENSMUST00000084474.5|Frmd3|ENSMUSG00000049122.11|FERM domain containing 3
mm10_v2_chr11_+_104231390_104231453	5.60162	Crx_Gsc	ENSMUST00000106992.3|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr6_-_59426279_59426345	5.2183	Crx_Gsc	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chr14_+_65968483_65968651	5.11262	Crx_Gsc	ENSMUST00000022616.6|Clu|ENSMUSG00000022037.8|clusterin
mm10_v2_chr13_+_110395041_110395057	5.04061	Crx_Gsc	ENSMUST00000022212.7|Plk2|ENSMUSG00000021701.7|polo-like kinase 2
mm10_v2_chr10_+_90576872_90576992	4.53142	Crx_Gsc	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr14_-_19977249_19977253	4.33932	Crx_Gsc	ENSMUST00000160013.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr14_-_19977151_19977204	3.59458	Crx_Gsc	ENSMUST00000055100.7|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2 	ENSMUST00000162425.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr14_-_19977040_19977059	3.40843	Crx_Gsc	ENSMUST00000159028.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr4_+_120854786_120854843	3.37254	Crx_Gsc	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr1_-_154725920_154725920	3.36914	Crx_Gsc	ENSMUST00000004214.8|Cacna1e|ENSMUSG00000004110.8|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm10_v2_chr11_+_6658510_6658574	3.24219	Crx_Gsc	ENSMUST00000045374.7|Ramp3|ENSMUSG00000041046.7|receptor (calcitonin) activity modifying protein 3
mm10_v2_chr7_-_140082246_140082301	3.1507	Crx_Gsc	ENSMUST00000166758.2|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr4_-_138396438_138396464	3.03309	Crx_Gsc	ENSMUST00000105032.2|Fam43b|ENSMUSG00000078235.2|family with sequence similarity 43, member B
mm10_v2_chr4_-_14621494_14621506	3.00923	Crx_Gsc	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr12_+_81631369_81631394	2.84522	Crx_Gsc	ENSMUST00000036116.5|Ttc9|ENSMUSG00000042734.5|tetratricopeptide repeat domain 9
mm10_v2_chr1_-_152625212_152625220	2.82406	Crx_Gsc	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr9_-_53975246_53975348	2.81857	Crx_Gsc	ENSMUST00000048409.7|Elmod1|ENSMUSG00000041986.9|ELMO/CED-12 domain containing 1
mm10_v2_chr19_+_26605106_26605119	2.72795	Crx_Gsc	ENSMUST00000025862.7|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176030.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr9_+_109051090_109051104	2.72037	Crx_Gsc	ENSMUST00000059097.8|Shisa5|ENSMUSG00000025647.10|shisa homolog 5 (Xenopus laevis)
mm10_v2_chr8_-_54724317_54724388	2.71798	Crx_Gsc	ENSMUST00000129132.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000150488.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000127511.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr17_+_55445550_55445701	2.61619	Crx_Gsc	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr15_-_84065329_84065364	2.54461	Crx_Gsc	ENSMUST00000156187.1|Efcab6|ENSMUSG00000022441.11|EF-hand calcium binding domain 6
mm10_v2_chrY_+_1010543_1010613	2.48547	Crx_Gsc	ENSMUST00000091197.3|Eif2s3y|ENSMUSG00000069049.5|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
mm10_v2_chr4_+_141368116_141368220	2.41209	Crx_Gsc	ENSMUST00000006380.4|Fam131c|ENSMUSG00000006218.4|family with sequence similarity 131, member C
mm10_v2_chr14_-_87141206_87141239	2.37316	Crx_Gsc	ENSMUST00000022599.7|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chr2_-_104257400_104257400	2.34903	Crx_Gsc	ENSMUST00000141159.1|D430041D05Rik|ENSMUSG00000068373.8|RIKEN cDNA D430041D05 gene
mm10_v2_chr2_+_65845833_65845850	2.29677	Crx_Gsc	ENSMUST00000053910.3|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr5_+_77265454_77265549	2.19864	Crx_Gsc	ENSMUST00000080359.5|Rest|ENSMUSG00000029249.9|RE1-silencing transcription factor
mm10_v2_chr8_-_54724474_54724504	2.139	Crx_Gsc	ENSMUST00000175915.1|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr2_+_65845767_65845799	2.12759	Crx_Gsc	ENSMUST00000122912.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr5_+_129584169_129584232	2.11477	Crx_Gsc	ENSMUST00000031390.8|Mmp17|ENSMUSG00000029436.8|matrix metallopeptidase 17
mm10_v2_chr9_-_95750335_95750368	2.1065	Crx_Gsc	ENSMUST00000053785.3|Trpc1|ENSMUSG00000032839.7|transient receptor potential cation channel, subfamily C, member 1
mm10_v2_chrX_+_7919816_7919905	2.09135	Crx_Gsc	ENSMUST00000041096.3|Pcsk1n|ENSMUSG00000039278.10|proprotein convertase subtilisin/kexin type 1 inhibitor
mm10_v2_chr2_-_24763047_24763153	2.00573	Crx_Gsc	ENSMUST00000100348.3|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000041342.5|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000114447.1|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000102939.2|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000070864.7|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm10_v2_chr11_-_70459957_70459984	1.8857	Crx_Gsc	ENSMUST00000019064.2|Cxcl16|ENSMUSG00000018920.5|chemokine (C-X-C motif) ligand 16
mm10_v2_chr2_+_69722797_69722840	1.851	Crx_Gsc	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr15_+_82252397_82252475	1.82834	Crx_Gsc	ENSMUST00000136948.1|1500009C09Rik|ENSMUSG00000068099.4|RIKEN cDNA 1500009C09 gene
mm10_v2_chr15_-_64382908_64382936	1.82699	Crx_Gsc	ENSMUST00000177374.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000023008.9|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000110115.2|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000110114.3|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm10_v2_chr4_+_12906838_12906881	1.81397	Crx_Gsc	ENSMUST00000143186.1|Triqk|ENSMUSG00000055963.6|triple QxxK/R motif containing 	ENSMUST00000183345.1|Triqk|ENSMUSG00000055963.6|triple QxxK/R motif containing
mm10_v2_chr18_+_37489465_37489465	1.76767	Crx_Gsc	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr7_+_44384803_44384868	1.76325	Crx_Gsc	ENSMUST00000120262.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr11_+_101246405_101246567	1.7626	Crx_Gsc	ENSMUST00000122006.1|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2 	ENSMUST00000151830.1|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2
mm10_v2_chr12_-_25096080_25096096	1.76159	Crx_Gsc	ENSMUST00000020974.6|Id2|ENSMUSG00000020644.8|inhibitor of DNA binding 2
mm10_v2_chr18_+_37477768_37477835	1.72804	Crx_Gsc	ENSMUST00000051442.5|Pcdhb16|ENSMUSG00000047910.5|protocadherin beta 16
mm10_v2_chr10_-_77969804_77969854	1.65405	Crx_Gsc	ENSMUST00000105399.1|Trpm2|ENSMUSG00000009292.11|transient receptor potential cation channel, subfamily M, member 2 	ENSMUST00000105401.2|Trpm2|ENSMUSG00000009292.11|transient receptor potential cation channel, subfamily M, member 2
mm10_v2_chr9_+_87144285_87144343	1.59343	Crx_Gsc	ENSMUST00000113149.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000143779.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000179313.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000049457.7|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2 	ENSMUST00000153444.1|Mrap2|ENSMUSG00000042761.8|melanocortin 2 receptor accessory protein 2
mm10_v2_chr8_+_119344490_119344538	1.57127	Crx_Gsc	ENSMUST00000034300.6|Hsbp1|ENSMUSG00000031839.6|heat shock factor binding protein 1
mm10_v2_chr11_+_83662579_83662594	1.48581	Crx_Gsc	ENSMUST00000019074.3|Ccl4|ENSMUSG00000018930.3|chemokine (C-C motif) ligand 4
mm10_v2_chr11_+_101246960_101247093	1.46892	Crx_Gsc	ENSMUST00000107282.3|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2
mm10_v2_chr1_-_126738167_126738230	1.46066	Crx_Gsc	ENSMUST00000160693.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr4_+_134496996_134497013	1.37589	Crx_Gsc	ENSMUST00000095074.3|Paqr7|ENSMUSG00000037348.9|progestin and adipoQ receptor family member VII
mm10_v2_chr7_-_134938264_134938430	1.35317	Crx_Gsc	ENSMUST00000171394.1|Fam196a|ENSMUSG00000073805.4|family with sequence similarity 196, member A
mm10_v2_chr10_-_62327757_62327768	1.32988	Crx_Gsc	ENSMUST00000139228.1|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr5_+_143651222_143651246	1.32054	Crx_Gsc	ENSMUST00000110727.1|Cyth3|ENSMUSG00000018001.12|cytohesin 3
mm10_v2_chr5_-_139484420_139484473	1.29604	Crx_Gsc	ENSMUST00000150992.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chr14_-_87141114_87141148	1.27866	Crx_Gsc	ENSMUST00000168889.1|Diap3|ENSMUSG00000022021.7|diaphanous homolog 3 (Drosophila)
mm10_v2_chr11_-_116412965_116413004	1.25054	Crx_Gsc	ENSMUST00000100202.3|Rnf157|ENSMUSG00000052949.8|ring finger protein 157 	ENSMUST00000106398.2|Rnf157|ENSMUSG00000052949.8|ring finger protein 157
mm10_v2_chr13_-_66227573_66227573	1.20755	Crx_Gsc	ENSMUST00000167981.2|Gm10772|ENSMUSG00000091347.2|predicted gene 10772
mm10_v2_chrX_-_85776606_85776653	1.20263	Crx_Gsc	ENSMUST00000142152.1|Gyk|ENSMUSG00000025059.10|glycerol kinase 	ENSMUST00000156390.1|Gyk|ENSMUSG00000025059.10|glycerol kinase 	ENSMUST00000113978.2|Gyk|ENSMUSG00000025059.10|glycerol kinase
mm10_v2_chr10_-_62379852_62379917	1.1816	Crx_Gsc	ENSMUST00000143236.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000133429.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000132926.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000116238.2|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr2_-_164404606_164404621	1.17004	Crx_Gsc	ENSMUST00000109359.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000109358.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000103103.3|Matn4|ENSMUSG00000016995.11|matrilin 4
mm10_v2_chr5_-_139484475_139484549	1.16169	Crx_Gsc	ENSMUST00000110851.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A 	ENSMUST00000079996.6|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chr11_-_55419898_55419915	1.13488	Crx_Gsc	ENSMUST00000108858.1|Sparc|ENSMUSG00000018593.6|secreted acidic cysteine rich glycoprotein 	ENSMUST00000141530.1|Sparc|ENSMUSG00000018593.6|secreted acidic cysteine rich glycoprotein
mm10_v2_chr7_+_44384098_44384154	1.13123	Crx_Gsc	ENSMUST00000118962.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III 	ENSMUST00000118831.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr7_+_44384604_44384674	1.10963	Crx_Gsc	ENSMUST00000130707.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III 	ENSMUST00000130844.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr16_+_17208135_17208135	1.09756	Crx_Gsc	ENSMUST00000169803.1|Rimbp3|ENSMUSG00000071636.5|RIMS binding protein 3
mm10_v2_chr18_-_70141568_70141622	1.0554	Crx_Gsc	ENSMUST00000121693.1|Rab27b|ENSMUSG00000024511.9|RAB27b, member RAS oncogene family
mm10_v2_chr8_-_60954726_60954790	1.05383	Crx_Gsc	ENSMUST00000110302.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr4_+_155704789_155704834	1.04482	Crx_Gsc	ENSMUST00000030905.2|Ssu72|ENSMUSG00000029038.3|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm10_v2_chr6_+_122921805_122921865	1.0285	Crx_Gsc	ENSMUST00000060484.8|Clec4a1|ENSMUSG00000049037.8|C-type lectin domain family 4, member a1
mm10_v2_chr1_+_178187721_178187847	1.0266	Crx_Gsc	ENSMUST00000159284.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr10_+_80930071_80930091	1.0143	Crx_Gsc	ENSMUST00000015456.8|Gadd45b|ENSMUSG00000015312.8|growth arrest and DNA-damage-inducible 45 beta
mm10_v2_chr8_+_20136455_20136574	0.999404	Crx_Gsc	ENSMUST00000179299.1|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811 	ENSMUST00000096485.4|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811
mm10_v2_chr7_+_99535439_99535498	0.984679	Crx_Gsc	ENSMUST00000098266.2|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1 	ENSMUST00000179755.1|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1
mm10_v2_chr8_+_117498272_117498291	0.980726	Crx_Gsc	ENSMUST00000081232.7|Plcg2|ENSMUSG00000034330.9|phospholipase C, gamma 2
mm10_v2_chr19_+_5024006_5024155	0.97261	Crx_Gsc	ENSMUST00000025826.5|Slc29a2|ENSMUSG00000024891.5|solute carrier family 29 (nucleoside transporters), member 2
mm10_v2_chr8_-_94876269_94876321	0.95824	Crx_Gsc	ENSMUST00000046461.7|Dok4|ENSMUSG00000040631.7|docking protein 4
mm10_v2_chrX_+_38600626_38600691	0.953444	Crx_Gsc	ENSMUST00000000365.2|Mcts1|ENSMUSG00000000355.7|malignant T cell amplified sequence 1
mm10_v2_chr12_+_87266696_87266760	0.950707	Crx_Gsc	ENSMUST00000021425.6|Ahsa1|ENSMUSG00000021037.6|AHA1, activator of heat shock protein ATPase 1
mm10_v2_chr5_+_90891234_90891250	0.935832	Crx_Gsc	ENSMUST00000031327.8|Cxcl1|ENSMUSG00000029380.10|chemokine (C-X-C motif) ligand 1
mm10_v2_chr12_+_55124528_55124528	0.933097	Crx_Gsc	ENSMUST00000177768.1|Fam177a|ENSMUSG00000095595.1|family with sequence similarity 177, member A
mm10_v2_chr11_-_115297510_115297519	0.923261	Crx_Gsc	ENSMUST00000056153.7|Fads6|ENSMUSG00000044788.10|fatty acid desaturase domain family, member 6
mm10_v2_chr1_-_155417394_155417435	0.901912	Crx_Gsc	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr7_+_99535652_99535740	0.888256	Crx_Gsc	ENSMUST00000032995.8|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1 	ENSMUST00000162404.1|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1
mm10_v2_chr19_-_5366285_5366378	0.882748	Crx_Gsc	ENSMUST00000170010.1|Banf1|ENSMUSG00000024844.8|barrier to autointegration factor 1
mm10_v2_chr5_+_117120120_117120180	0.872284	Crx_Gsc	ENSMUST00000111978.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3
mm10_v2_chr3_-_89365233_89365253	0.866459	Crx_Gsc	ENSMUST00000070820.6|Dcst1|ENSMUSG00000042672.9|DC-STAMP domain containing 1
mm10_v2_chr11_-_29247208_29247409	0.862612	Crx_Gsc	ENSMUST00000020754.3|Ccdc104|ENSMUSG00000020462.8|coiled-coil domain containing 104
mm10_v2_chr9_+_45370185_45370208	0.852109	Crx_Gsc	ENSMUST00000085939.6|Fxyd6|ENSMUSG00000066705.6|FXYD domain-containing ion transport regulator 6
mm10_v2_chr19_-_43752924_43753001	0.849765	Crx_Gsc	ENSMUST00000045562.5|Cox15|ENSMUSG00000040018.9|cytochrome c oxidase assembly protein 15
mm10_v2_chr13_+_108046411_108046424	0.839401	Crx_Gsc	ENSMUST00000095458.4|Smim15|ENSMUSG00000071180.4|small integral membrane protein 15
mm10_v2_chr11_-_109722214_109722289	0.767331	Crx_Gsc	ENSMUST00000020938.7|Fam20a|ENSMUSG00000020614.7|family with sequence similarity 20, member A
mm10_v2_chrX_+_153139941_153140011	0.76057	Crx_Gsc	ENSMUST00000039720.4|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B 	ENSMUST00000144175.2|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B
mm10_v2_chrX_+_73483602_73483644	0.756679	Crx_Gsc	ENSMUST00000033741.8|Bgn|ENSMUSG00000031375.11|biglycan 	ENSMUST00000169489.1|Bgn|ENSMUSG00000031375.11|biglycan
mm10_v2_chr18_+_42511496_42511521	0.755	Crx_Gsc	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr4_+_65604984_65605052	0.735836	Crx_Gsc	ENSMUST00000050850.7|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32 	ENSMUST00000107366.1|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32
mm10_v2_chr14_-_20546512_20546582	0.731746	Crx_Gsc	ENSMUST00000022355.4|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000161445.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000159027.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform
mm10_v2_chr1_+_178187417_178187713	0.726654	Crx_Gsc	ENSMUST00000161075.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2 	ENSMUST00000027783.7|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr10_-_39899238_39899238	0.698461	Crx_Gsc	ENSMUST00000178563.1|AA474331|ENSMUSG00000096687.1|expressed sequence AA474331
mm10_v2_chr16_-_36666067_36666086	0.690092	Crx_Gsc	ENSMUST00000089620.4|Cd86|ENSMUSG00000022901.7|CD86 antigen
mm10_v2_chr18_-_60848911_60848976	0.687549	Crx_Gsc	ENSMUST00000177172.1|Tcof1|ENSMUSG00000024613.10|Treacher Collins Franceschetti syndrome 1, homolog 	ENSMUST00000175934.1|Tcof1|ENSMUSG00000024613.10|Treacher Collins Franceschetti syndrome 1, homolog 	ENSMUST00000176630.1|Tcof1|ENSMUSG00000024613.10|Treacher Collins Franceschetti syndrome 1, homolog
mm10_v2_chr5_+_143758293_143758363	0.676934	Crx_Gsc	ENSMUST00000180951.1|D130017N08Rik|ENSMUSG00000097287.1|RIKEN cDNA D130017N08 gene
mm10_v2_chr17_-_66519666_66519727	0.660695	Crx_Gsc	ENSMUST00000167962.1|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family 	ENSMUST00000070538.4|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family
mm10_v2_chr10_+_127642975_127643034	0.639754	Crx_Gsc	ENSMUST00000092074.5|Stat6|ENSMUSG00000002147.12|signal transducer and activator of transcription 6 	ENSMUST00000120279.1|Stat6|ENSMUSG00000002147.12|signal transducer and activator of transcription 6
mm10_v2_chr1_+_24678536_24678609	0.636876	Crx_Gsc	ENSMUST00000095062.3|Lmbrd1|ENSMUSG00000073725.2|LMBR1 domain containing 1
mm10_v2_chr1_-_155417283_155417323	0.636104	Crx_Gsc	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr2_-_58052832_58052870	0.632725	Crx_Gsc	ENSMUST00000090940.5|Ermn|ENSMUSG00000026830.9|ermin, ERM-like protein
mm10_v2_chr1_-_43827751_43827800	0.612158	Crx_Gsc	ENSMUST00000128261.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000126008.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000139451.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1
mm10_v2_chr2_+_181680284_181680332	0.612052	Crx_Gsc	ENSMUST00000103042.3|Tcea2|ENSMUSG00000059540.9|transcription elongation factor A (SII), 2
mm10_v2_chr7_+_24399606_24399673	0.602792	Crx_Gsc	ENSMUST00000002280.4|Smg9|ENSMUSG00000002210.5|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm10_v2_chr2_-_101883010_101883023	0.602724	Crx_Gsc	ENSMUST00000154525.1|Prr5l|ENSMUSG00000032841.9|proline rich 5 like
mm10_v2_chr7_-_4532419_4532470	0.599055	Crx_Gsc	ENSMUST00000094897.4|Dnaaf3|ENSMUSG00000055809.7|dynein, axonemal assembly factor 3
mm10_v2_chr17_-_10320229_10320346	0.597705	Crx_Gsc	ENSMUST00000053066.6|Qk|ENSMUSG00000044407.6|quaking
mm10_v2_chr8_-_79711631_79711740	0.595271	Crx_Gsc	ENSMUST00000080536.6|Abce1|ENSMUSG00000058355.6|ATP-binding cassette, sub-family E (OABP), member 1
mm10_v2_chr8_+_123411424_123411562	0.594705	Crx_Gsc	ENSMUST00000071134.3|Tubb3|ENSMUSG00000062380.3|tubulin, beta 3 class III
mm10_v2_chr16_-_94526830_94526839	0.593493	Crx_Gsc	ENSMUST00000023615.6|Dscr3|ENSMUSG00000022898.6|Down syndrome critical region gene 3
mm10_v2_chr16_-_55838827_55838899	0.587073	Crx_Gsc	ENSMUST00000096026.2|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000036273.6|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta 	ENSMUST00000114457.1|Nfkbiz|ENSMUSG00000035356.10|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
mm10_v2_chr6_+_123229843_123229863	0.580916	Crx_Gsc	ENSMUST00000112554.2|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000024118.4|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n 	ENSMUST00000117130.1|Clec4n|ENSMUSG00000023349.8|C-type lectin domain family 4, member n
mm10_v2_chr17_+_34197715_34197790	0.575132	Crx_Gsc	ENSMUST00000173441.1|Psmb8|ENSMUSG00000024338.8|proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) 	ENSMUST00000025196.8|Psmb8|ENSMUSG00000024338.8|proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
mm10_v2_chr19_-_5366626_5366663	0.571363	Crx_Gsc	ENSMUST00000025762.8|Banf1|ENSMUSG00000024844.8|barrier to autointegration factor 1
mm10_v2_chr11_+_120598532_120598549	0.571216	Crx_Gsc	ENSMUST00000093140.4|Anapc11|ENSMUSG00000025135.6|anaphase promoting complex subunit 11
mm10_v2_chr11_+_115475645_115475727	0.570238	Crx_Gsc	ENSMUST00000035240.6|Armc7|ENSMUSG00000057219.5|armadillo repeat containing 7
mm10_v2_chr2_+_163225363_163225469	0.565056	Crx_Gsc	ENSMUST00000099110.3|Tox2|ENSMUSG00000074607.5|TOX high mobility group box family member 2 	ENSMUST00000165937.1|Tox2|ENSMUSG00000074607.5|TOX high mobility group box family member 2
mm10_v2_chr6_+_58831748_58831898	0.55349	Crx_Gsc	ENSMUST00000126292.1|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3 	ENSMUST00000031823.5|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3
mm10_v2_chr4_+_84884366_84884407	0.552857	Crx_Gsc	ENSMUST00000102819.3|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr1_-_150392719_150392762	0.547981	Crx_Gsc	ENSMUST00000006167.6|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331 	ENSMUST00000094477.2|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331 	ENSMUST00000097547.3|BC003331|ENSMUSG00000006010.8|cDNA sequence BC003331
mm10_v2_chr19_-_10881677_10881717	0.543137	Crx_Gsc	ENSMUST00000128835.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr11_+_120598421_120598518	0.538101	Crx_Gsc	ENSMUST00000026128.3|Anapc11|ENSMUSG00000025135.6|anaphase promoting complex subunit 11
mm10_v2_chr11_+_11115784_11115851	0.533364	Crx_Gsc	ENSMUST00000056344.4|Vwc2|ENSMUSG00000050830.11|von Willebrand factor C domain containing 2
mm10_v2_chr1_+_166254095_166254156	0.519605	Crx_Gsc	ENSMUST00000111416.1|Ildr2|ENSMUSG00000040612.8|immunoglobulin-like domain containing receptor 2
mm10_v2_chr9_-_13827029_13827129	0.501498	Crx_Gsc	ENSMUST00000148086.1|Cep57|ENSMUSG00000031922.6|centrosomal protein 57 	ENSMUST00000034398.5|Cep57|ENSMUSG00000031922.6|centrosomal protein 57
mm10_v2_chr19_-_11818806_11818893	0.499194	Crx_Gsc	ENSMUST00000075304.6|Stx3|ENSMUSG00000041488.9|syntaxin 3
mm10_v2_chr2_+_91922178_91922194	0.498584	Crx_Gsc	ENSMUST00000170432.1|Chrm4|ENSMUSG00000040495.3|cholinergic receptor, muscarinic 4
mm10_v2_chrX_-_103186618_103186671	0.489178	Crx_Gsc	ENSMUST00000121720.1|Nap1l2|ENSMUSG00000082229.1|nucleosome assembly protein 1-like 2
mm10_v2_chr19_-_7206234_7206316	0.486766	Crx_Gsc	ENSMUST00000123594.1|Otub1|ENSMUSG00000024767.5|OTU domain, ubiquitin aldehyde binding 1 	ENSMUST00000025679.4|Otub1|ENSMUSG00000024767.5|OTU domain, ubiquitin aldehyde binding 1
mm10_v2_chr10_-_17947997_17948098	0.48208	Crx_Gsc	ENSMUST00000037879.6|Heca|ENSMUSG00000039879.8|headcase homolog (Drosophila)
mm10_v2_chr5_-_112589990_112590002	0.478584	Crx_Gsc	ENSMUST00000183186.1|1700034G24Rik|ENSMUSG00000097962.1|RIKEN cDNA 1700034G24 gene 	ENSMUST00000182949.1|1700034G24Rik|ENSMUSG00000097962.1|RIKEN cDNA 1700034G24 gene
mm10_v2_chr17_+_25016068_25016124	0.467822	Crx_Gsc	ENSMUST00000137386.1|Ift140|ENSMUSG00000024169.9|intraflagellar transport 140
mm10_v2_chr16_-_31081363_31081439	0.459064	Crx_Gsc	ENSMUST00000055389.7|Xxylt1|ENSMUSG00000047434.7|xyloside xylosyltransferase 1
mm10_v2_chr4_+_84884418_84884465	0.455786	Crx_Gsc	ENSMUST00000169371.2|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr19_-_32712287_32712336	0.453475	Crx_Gsc	ENSMUST00000070210.4|Atad1|ENSMUSG00000013662.5|ATPase family, AAA domain containing 1
mm10_v2_chr10_-_9901079_9901250	0.446132	Crx_Gsc	ENSMUST00000141722.1|Stxbp5|ENSMUSG00000019790.10|syntaxin binding protein 5 (tomosyn)
mm10_v2_chr11_+_3514861_3514894	0.443632	Crx_Gsc	ENSMUST00000094469.4|Selm|ENSMUSG00000075702.9|selenoprotein M
mm10_v2_chr10_-_56228636_56228695	0.442908	Crx_Gsc	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr14_-_20546440_20546481	0.432341	Crx_Gsc	ENSMUST00000161989.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform
mm10_v2_chr9_+_108991902_108991969	0.432067	Crx_Gsc	ENSMUST00000147989.1|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 	ENSMUST00000051873.8|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
mm10_v2_chr14_+_61138445_61138495	0.430013	Crx_Gsc	ENSMUST00000089394.3|Sacs|ENSMUSG00000048279.11|sacsin 	ENSMUST00000119509.1|Sacs|ENSMUSG00000048279.11|sacsin
mm10_v2_chr3_+_28781305_28781344	0.424604	Crx_Gsc	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr15_-_79254737_79254764	0.423947	Crx_Gsc	ENSMUST00000039752.3|Slc16a8|ENSMUSG00000032988.3|solute carrier family 16 (monocarboxylic acid transporters), member 8
mm10_v2_chr9_+_13827708_13827781	0.423751	Crx_Gsc	ENSMUST00000059579.5|Fam76b|ENSMUSG00000037808.6|family with sequence similarity 76, member B
mm10_v2_chr19_+_53140430_53140449	0.423549	Crx_Gsc	ENSMUST00000111741.2|Add3|ENSMUSG00000025026.8|adducin 3 (gamma)
mm10_v2_chr18_-_60624304_60624351	0.420128	Crx_Gsc	ENSMUST00000097566.3|Synpo|ENSMUSG00000043079.11|synaptopodin
mm10_v2_chr19_-_10881723_10881766	0.419444	Crx_Gsc	ENSMUST00000144681.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr4_-_56947411_56947447	0.419111	Crx_Gsc	ENSMUST00000107609.3|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245 	ENSMUST00000068792.6|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245
mm10_v2_chr12_+_85599047_85599105	0.418904	Crx_Gsc	ENSMUST00000177587.1|Jdp2|ENSMUSG00000034271.9|Jun dimerization protein 2
mm10_v2_chr1_-_13660476_13660554	0.414657	Crx_Gsc	ENSMUST00000027071.5|Lactb2|ENSMUSG00000025937.5|lactamase, beta 2
mm10_v2_chr2_-_32381909_32381938	0.409442	Crx_Gsc	ENSMUST00000048792.4|1110008P14Rik|ENSMUSG00000039195.4|RIKEN cDNA 1110008P14 gene
mm10_v2_chr1_-_52490736_52490736	0.38969	Crx_Gsc	ENSMUST00000170269.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr1_+_85575676_85575676	0.387619	Crx_Gsc	ENSMUST00000178024.1|G530012D18Rik|ENSMUSG00000094127.1|RIKEN cDNA G530012D1 gene
mm10_v2_chr17_+_37002527_37002569	0.38638	Crx_Gsc	ENSMUST00000174747.1|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57
mm10_v2_chr5_-_45450143_45450201	0.386375	Crx_Gsc	ENSMUST00000154962.1|Qdpr|ENSMUSG00000015806.6|quinoid dihydropteridine reductase
mm10_v2_chr14_+_30549131_30549188	0.382605	Crx_Gsc	ENSMUST00000022529.6|Tkt|ENSMUSG00000021957.6|transketolase
mm10_v2_chr11_+_70459940_70460137	0.380209	Crx_Gsc	ENSMUST00000147289.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15 	ENSMUST00000126105.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15
mm10_v2_chr11_+_78322965_78322996	0.379817	Crx_Gsc	ENSMUST00000017534.8|Aldoc|ENSMUSG00000017390.9|aldolase C, fructose-bisphosphate
mm10_v2_chr10_+_80855275_80855322	0.37239	Crx_Gsc	ENSMUST00000035597.8|Sppl2b|ENSMUSG00000035206.9|signal peptide peptidase like 2B
mm10_v2_chr17_-_28441718_28441732	0.371936	Crx_Gsc	ENSMUST00000153744.1|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr4_+_84884276_84884314	0.351861	Crx_Gsc	ENSMUST00000047023.6|Cntln|ENSMUSG00000038070.9|centlein, centrosomal protein
mm10_v2_chr7_-_43533171_43533209	0.340103	Crx_Gsc	ENSMUST00000004728.5|Cd33|ENSMUSG00000004609.5|CD33 antigen 	ENSMUST00000039861.5|Cd33|ENSMUSG00000004609.5|CD33 antigen
mm10_v2_chr14_-_63543931_63543991	0.337164	Crx_Gsc	ENSMUST00000058679.5|Mtmr9|ENSMUSG00000035078.5|myotubularin related protein 9
mm10_v2_chr5_-_92278155_92278171	0.335289	Crx_Gsc	ENSMUST00000159345.1|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase 	ENSMUST00000113102.3|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase
mm10_v2_chr2_-_30093607_30093641	0.330234	Crx_Gsc	ENSMUST00000081838.6|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr8_+_106150359_106150417	0.315133	Crx_Gsc	ENSMUST00000034377.6|Pla2g15|ENSMUSG00000031903.6|phospholipase A2, group XV
mm10_v2_chr5_-_137531204_137531297	0.312471	Crx_Gsc	ENSMUST00000150063.2|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr9_-_109074049_109074140	0.311177	Crx_Gsc	ENSMUST00000161521.1|Atrip|ENSMUSG00000025646.2|ATR interacting protein 	ENSMUST00000045011.2|Atrip|ENSMUSG00000025646.2|ATR interacting protein
mm10_v2_chr17_-_35164891_35164901	0.306769	Crx_Gsc	ENSMUST00000025253.5|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr7_-_44986313_44986492	0.306258	Crx_Gsc	ENSMUST00000045325.6|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000085387.4|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000107840.1|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000107843.3|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1 	ENSMUST00000107842.3|Prmt1|ENSMUSG00000052429.11|protein arginine N-methyltransferase 1
mm10_v2_chr4_-_134535382_134535391	0.305685	Crx_Gsc	ENSMUST00000116279.3|Mtfr1l|ENSMUSG00000046671.12|mitochondrial fission regulator 1-like 	ENSMUST00000146808.1|Mtfr1l|ENSMUSG00000046671.12|mitochondrial fission regulator 1-like
mm10_v2_chr14_-_77036641_77036641	0.303325	Crx_Gsc	ENSMUST00000062789.8|Lacc1|ENSMUSG00000044350.8|laccase (multicopper oxidoreductase) domain containing 1
mm10_v2_chr8_+_45975514_45975558	0.301154	Crx_Gsc	ENSMUST00000034051.6|Ufsp2|ENSMUSG00000031634.6|UFM1-specific peptidase 2
mm10_v2_chr6_-_85137743_85137781	0.299069	Crx_Gsc	ENSMUST00000174769.1|Spr|ENSMUSG00000033735.7|sepiapterin reductase 	ENSMUST00000174286.1|Spr|ENSMUSG00000033735.7|sepiapterin reductase 	ENSMUST00000045986.7|Spr|ENSMUSG00000033735.7|sepiapterin reductase
mm10_v2_chr18_+_37674303_37674365	0.297635	Crx_Gsc	ENSMUST00000073447.5|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr1_+_128244122_128244181	0.296455	Crx_Gsc	ENSMUST00000027592.3|Ubxn4|ENSMUSG00000026353.3|UBX domain protein 4
mm10_v2_chr10_-_81496329_81496392	0.296191	Crx_Gsc	ENSMUST00000020463.7|Ncln|ENSMUSG00000020238.8|nicalin homolog (zebrafish)
mm10_v2_chr10_-_81496313_81496326	0.292168	Crx_Gsc	ENSMUST00000118498.1|Ncln|ENSMUSG00000020238.8|nicalin homolog (zebrafish)
mm10_v2_chr12_-_80260356_80260371	0.288011	Crx_Gsc	ENSMUST00000021554.8|Actn1|ENSMUSG00000015143.8|actinin, alpha 1
mm10_v2_chr8_-_34107816_34107852	0.285914	Crx_Gsc	ENSMUST00000118811.1|Dctn6|ENSMUSG00000031516.5|dynactin 6
mm10_v2_chr8_-_95853501_95853539	0.282234	Crx_Gsc	ENSMUST00000040481.3|Slc38a7|ENSMUSG00000036534.5|solute carrier family 38, member 7
mm10_v2_chr7_-_79848191_79848224	0.275726	Crx_Gsc	ENSMUST00000107392.1|Anpep|ENSMUSG00000039062.9|alanyl (membrane) aminopeptidase
mm10_v2_chr19_+_43689672_43689695	0.27213	Crx_Gsc	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr10_+_128267997_128267997	0.267564	Crx_Gsc	ENSMUST00000050901.2|Apof|ENSMUSG00000047631.2|apolipoprotein F
mm10_v2_chr5_-_92310003_92310024	0.266748	Crx_Gsc	ENSMUST00000031364.1|Sdad1|ENSMUSG00000029415.1|SDA1 domain containing 1
mm10_v2_chr6_+_86438360_86438405	0.256199	Crx_Gsc	ENSMUST00000050497.7|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr10_+_3973086_3973157	0.255843	Crx_Gsc	ENSMUST00000117291.1|Mthfd1l|ENSMUSG00000040675.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 	ENSMUST00000120585.1|Mthfd1l|ENSMUSG00000040675.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 	ENSMUST00000043735.7|Mthfd1l|ENSMUSG00000040675.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm10_v2_chr16_+_52031549_52031570	0.252522	Crx_Gsc	ENSMUST00000114471.1|Cblb|ENSMUSG00000022637.10|Casitas B-lineage lymphoma b
mm10_v2_chr16_+_11405648_11405713	0.251469	Crx_Gsc	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr13_-_90089060_90089092	0.249796	Crx_Gsc	ENSMUST00000161396.1|Xrcc4|ENSMUSG00000021615.7|X-ray repair complementing defective repair in Chinese hamster cells 4
mm10_v2_chr8_-_45975224_45975281	0.249563	Crx_Gsc	ENSMUST00000095323.1|1700029J07Rik|ENSMUSG00000071103.3|RIKEN cDNA 1700029J07 gene 	ENSMUST00000098786.2|1700029J07Rik|ENSMUSG00000071103.3|RIKEN cDNA 1700029J07 gene
mm10_v2_chr4_-_108406676_108406745	0.249499	Crx_Gsc	ENSMUST00000184609.1|Gpx7|ENSMUSG00000028597.11|glutathione peroxidase 7
mm10_v2_chr10_-_53379816_53379858	0.249452	Crx_Gsc	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr17_-_25570678_25570694	0.242219	Crx_Gsc	ENSMUST00000025003.3|Sox8|ENSMUSG00000024176.4|SRY-box containing gene 8 	ENSMUST00000173447.1|Sox8|ENSMUSG00000024176.4|SRY-box containing gene 8
mm10_v2_chr4_+_43493345_43493430	0.239394	Crx_Gsc	ENSMUST00000030181.5|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107 	ENSMUST00000107922.2|Ccdc107|ENSMUSG00000028461.6|coiled-coil domain containing 107
mm10_v2_chr13_-_74208661_74208719	0.238495	Crx_Gsc	ENSMUST00000035934.5|Exoc3|ENSMUSG00000034152.5|exocyst complex component 3
mm10_v2_chrX_+_52791179_52791201	0.237025	Crx_Gsc	ENSMUST00000101588.1|Ccdc160|ENSMUSG00000073207.1|coiled-coil domain containing 160
mm10_v2_chr5_-_45450221_45450235	0.230755	Crx_Gsc	ENSMUST00000015950.5|Qdpr|ENSMUSG00000015806.6|quinoid dihydropteridine reductase
mm10_v2_chr5_+_145083830_145083887	0.228284	Crx_Gsc	ENSMUST00000031625.8|Arpc1a|ENSMUSG00000029621.8|actin related protein 2/3 complex, subunit 1A
mm10_v2_chr5_-_34513892_34513991	0.227421	Crx_Gsc	ENSMUST00000114359.1|Tnip2|ENSMUSG00000059866.7|TNFAIP3 interacting protein 2 	ENSMUST00000030991.7|Tnip2|ENSMUSG00000059866.7|TNFAIP3 interacting protein 2 	ENSMUST00000087737.3|Tnip2|ENSMUSG00000059866.7|TNFAIP3 interacting protein 2
mm10_v2_chr17_+_35517100_35517259	0.225837	Crx_Gsc	ENSMUST00000164242.2|Cchcr1|ENSMUSG00000040312.8|coiled-coil alpha-helical rod protein 1 	ENSMUST00000045956.7|Cchcr1|ENSMUSG00000040312.8|coiled-coil alpha-helical rod protein 1
mm10_v2_chr1_+_171437535_171437566	0.223708	Crx_Gsc	ENSMUST00000043839.4|F11r|ENSMUSG00000038235.4|F11 receptor
mm10_v2_chr13_+_54789500_54789645	0.215736	Crx_Gsc	ENSMUST00000163915.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000099503.3|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000171859.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17
mm10_v2_chr13_+_54789377_54789497	0.210062	Crx_Gsc	ENSMUST00000026993.7|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000131692.2|Tspan17|ENSMUSG00000025875.8|tetraspanin 17 	ENSMUST00000163796.1|Tspan17|ENSMUSG00000025875.8|tetraspanin 17
mm10_v2_chr5_-_117287583_117287625	0.203038	Crx_Gsc	ENSMUST00000111973.1|Pebp1|ENSMUSG00000032959.6|phosphatidylethanolamine binding protein 1 	ENSMUST00000036951.6|Pebp1|ENSMUSG00000032959.6|phosphatidylethanolamine binding protein 1
mm10_v2_chr8_-_70873477_70873501	0.201242	Crx_Gsc	ENSMUST00000007865.5|Ccdc124|ENSMUSG00000007721.5|coiled-coil domain containing 124
mm10_v2_chr14_+_64588112_64588120	0.200901	Crx_Gsc	ENSMUST00000181808.1|A930011O12Rik|ENSMUSG00000097545.1|RIKEN cDNA A930011O12 gene
mm10_v2_chr9_+_95954744_95954783	0.200061	Crx_Gsc	ENSMUST00000034981.7|Xrn1|ENSMUSG00000032410.7|5'-3' exoribonuclease 1
mm10_v2_chr2_-_30093642_30093679	0.197379	Crx_Gsc	ENSMUST00000102865.4|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr10_-_59616667_59616695	0.193339	Crx_Gsc	ENSMUST00000020312.6|Mcu|ENSMUSG00000009647.7|mitochondrial calcium uniporter
mm10_v2_chr8_+_70673198_70673267	0.188833	Crx_Gsc	ENSMUST00000034311.8|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr10_+_111972664_111972805	0.182659	Crx_Gsc	ENSMUST00000163048.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000174653.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr8_+_70673364_70673432	0.175393	Crx_Gsc	ENSMUST00000146972.1|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr10_-_10558199_10558250	0.171637	Crx_Gsc	ENSMUST00000019974.3|Rab32|ENSMUSG00000019832.3|RAB32, member RAS oncogene family
mm10_v2_chr1_-_185329331_185329401	0.170906	Crx_Gsc	ENSMUST00000027921.4|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110975.1|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110974.3|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial
mm10_v2_chr9_-_50617228_50617289	0.166325	Crx_Gsc	ENSMUST00000147671.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000145139.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000155435.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr10_+_82378593_82378593	0.16503	Crx_Gsc	ENSMUST00000165906.1|Gm4924|ENSMUSG00000073427.3|predicted gene 4924
mm10_v2_chr10_+_70204675_70204684	0.164868	Crx_Gsc	ENSMUST00000020090.1|2310015B20Rik|ENSMUSG00000019933.1|RIKEN cDNA 2310015B20 gene
mm10_v2_chr4_-_149737957_149738054	0.155137	Crx_Gsc	ENSMUST00000105687.2|Tmem201|ENSMUSG00000044700.9|transmembrane protein 201 	ENSMUST00000054459.4|Tmem201|ENSMUSG00000044700.9|transmembrane protein 201 	ENSMUST00000103208.1|Tmem201|ENSMUSG00000044700.9|transmembrane protein 201
mm10_v2_chr5_-_123721007_123721062	0.154818	Crx_Gsc	ENSMUST00000031376.7|Zcchc8|ENSMUSG00000029427.7|zinc finger, CCHC domain containing 8
mm10_v2_chr9_-_121839460_121839465	0.144358	Crx_Gsc	ENSMUST00000135986.2|Ccdc13|ENSMUSG00000079235.4|coiled-coil domain containing 13
mm10_v2_chr18_+_3471630_3471630	0.143746	Crx_Gsc	ENSMUST00000179907.1|G430049J08Rik|ENSMUSG00000096528.1|RIKEN cDNA G430049J08 gene
mm10_v2_chr11_-_100472725_100472759	0.141221	Crx_Gsc	ENSMUST00000056665.3|Klhl11|ENSMUSG00000048732.5|kelch-like 11
mm10_v2_chr11_+_109649376_109649437	0.140048	Crx_Gsc	ENSMUST00000106677.1|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chr4_+_21727695_21727716	0.139697	Crx_Gsc	ENSMUST00000065928.4|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr4_-_134535268_134535314	0.136965	Crx_Gsc	ENSMUST00000102550.3|Mtfr1l|ENSMUSG00000046671.12|mitochondrial fission regulator 1-like
mm10_v2_chrX_-_75578188_75578247	0.132718	Crx_Gsc	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr11_-_53430417_53430434	0.129135	Crx_Gsc	ENSMUST00000109019.1|Uqcrq|ENSMUSG00000044894.8|ubiquinol-cytochrome c reductase, complex III subunit VII
mm10_v2_chr10_+_56106883_56106937	0.127646	Crx_Gsc	ENSMUST00000063138.7|Msl3l2|ENSMUSG00000047669.7|male-specific lethal 3-like 2 (Drosophila)
mm10_v2_chr11_-_82908360_82908411	0.123197	Crx_Gsc	ENSMUST00000103213.3|Nle1|ENSMUSG00000020692.8|notchless homolog 1 (Drosophila)
mm10_v2_chr8_-_104248499_104248569	0.122369	Crx_Gsc	ENSMUST00000050211.5|Tk2|ENSMUSG00000035824.6|thymidine kinase 2, mitochondrial
mm10_v2_chr4_-_133633419_133633525	0.121668	Crx_Gsc	ENSMUST00000084238.4|Zdhhc18|ENSMUSG00000037553.8|zinc finger, DHHC domain containing 18
mm10_v2_chr1_-_165194310_165194433	0.119267	Crx_Gsc	ENSMUST00000043338.4|Sft2d2|ENSMUSG00000040848.6|SFT2 domain containing 2
mm10_v2_chr1_+_150392794_150392849	0.114689	Crx_Gsc	ENSMUST00000124973.2|Tpr|ENSMUSG00000006005.11|translocated promoter region
mm10_v2_chr17_+_37002510_37002525	0.11097	Crx_Gsc	ENSMUST00000069250.7|Zfp57|ENSMUSG00000036036.9|zinc finger protein 57
mm10_v2_chr8_+_71542911_71542973	0.105265	Crx_Gsc	ENSMUST00000034272.7|Mvb12a|ENSMUSG00000031813.7|multivesicular body subunit 12A
mm10_v2_chr11_+_75486813_75486866	0.102196	Crx_Gsc	ENSMUST00000018449.4|Prpf8|ENSMUSG00000020850.8|pre-mRNA processing factor 8 	ENSMUST00000102510.1|Prpf8|ENSMUSG00000020850.8|pre-mRNA processing factor 8 	ENSMUST00000131283.1|Prpf8|ENSMUSG00000020850.8|pre-mRNA processing factor 8
mm10_v2_chr19_-_6128208_6128304	0.101158	Crx_Gsc	ENSMUST00000025702.7|Snx15|ENSMUSG00000024787.7|sorting nexin 15
mm10_v2_chr4_-_40703188_40703203	0.0976618	Crx_Gsc	ENSMUST00000030119.3|Aptx|ENSMUSG00000028411.9|aprataxin
mm10_v2_chr5_-_22550279_22550386	0.0950497	Crx_Gsc	ENSMUST00000030872.5|Orc5|ENSMUSG00000029012.5|origin recognition complex, subunit 5
mm10_v2_chr1_+_55131253_55131302	0.0938906	Crx_Gsc	ENSMUST00000027122.7|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr2_+_69861638_69861686	0.0891324	Crx_Gsc	ENSMUST00000112260.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr11_-_69837781_69837787	0.0873361	Crx_Gsc	ENSMUST00000108634.2|Nlgn2|ENSMUSG00000051790.9|neuroligin 2
mm10_v2_chr9_+_44334685_44334715	0.086163	Crx_Gsc	ENSMUST00000052686.2|H2afx|ENSMUSG00000049932.2|H2A histone family, member X
mm10_v2_chr7_-_44257378_44257378	0.0840082	Crx_Gsc	ENSMUST00000107945.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular 	ENSMUST00000118216.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular
mm10_v2_chr11_+_3963970_3963983	0.0790583	Crx_Gsc	ENSMUST00000020705.4|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish) 	ENSMUST00000109985.1|Pes1|ENSMUSG00000020430.6|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm10_v2_chr8_+_3393018_3393073	0.0744227	Crx_Gsc	ENSMUST00000004684.6|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18 	ENSMUST00000145394.1|Arhgef18|ENSMUSG00000004568.6|rho/rac guanine nucleotide exchange factor (GEF) 18
mm10_v2_chr7_+_24884809_24884917	0.0730608	Crx_Gsc	ENSMUST00000156372.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19 	ENSMUST00000124035.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19
mm10_v2_chr19_-_6128144_6128191	0.0726905	Crx_Gsc	ENSMUST00000154601.1|Snx15|ENSMUSG00000024787.7|sorting nexin 15 	ENSMUST00000138931.1|Snx15|ENSMUSG00000024787.7|sorting nexin 15
mm10_v2_chr7_+_28825202_28825217	0.071136	Crx_Gsc	ENSMUST00000066264.6|Ech1|ENSMUSG00000053898.6|enoyl coenzyme A hydratase 1, peroxisomal
mm10_v2_chr11_+_5520652_5520659	0.0708175	Crx_Gsc	ENSMUST00000063084.9|Xbp1|ENSMUSG00000020484.12|X-box binding protein 1
mm10_v2_chr9_+_27030159_27030197	0.0701202	Crx_Gsc	ENSMUST00000073127.7|Ncapd3|ENSMUSG00000035024.9|non-SMC condensin II complex, subunit D3 	ENSMUST00000086198.4|Ncapd3|ENSMUSG00000035024.9|non-SMC condensin II complex, subunit D3
mm10_v2_chr13_+_49608030_49608071	0.0681731	Crx_Gsc	ENSMUST00000021822.5|Ogn|ENSMUSG00000021390.5|osteoglycin
mm10_v2_chr13_-_92354943_92355025	0.0679034	Crx_Gsc	ENSMUST00000022220.6|Msh3|ENSMUSG00000014850.9|mutS homolog 3 (E. coli)
mm10_v2_chr11_-_59809774_59810016	0.0675732	Crx_Gsc	ENSMUST00000047706.2|Flcn|ENSMUSG00000032633.6|folliculin 	ENSMUST00000102697.3|Flcn|ENSMUSG00000032633.6|folliculin
mm10_v2_chr6_-_13608011_13608100	0.0673605	Crx_Gsc	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr2_+_181864337_181864438	0.0669935	Crx_Gsc	ENSMUST00000039551.8|Polr3k|ENSMUSG00000038628.8|polymerase (RNA) III (DNA directed) polypeptide K
mm10_v2_chr9_+_59539643_59539717	0.0550106	Crx_Gsc	ENSMUST00000026262.6|Hexa|ENSMUSG00000025232.7|hexosaminidase A
mm10_v2_chr2_+_69861562_69861584	0.0496082	Crx_Gsc	ENSMUST00000090852.4|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B 	ENSMUST00000166411.1|Ssb|ENSMUSG00000068882.7|Sjogren syndrome antigen B
mm10_v2_chr15_+_102326116_102326152	0.0495989	Crx_Gsc	ENSMUST00000166658.1|Pfdn5|ENSMUSG00000001289.6|prefoldin 5 	ENSMUST00000062492.4|Pfdn5|ENSMUSG00000001289.6|prefoldin 5
mm10_v2_chr1_-_34439672_34439672	0.0457552	Crx_Gsc	ENSMUST00000042493.8|Ccdc115|ENSMUSG00000042111.8|coiled-coil domain containing 115
mm10_v2_chr2_+_91054054_91054114	0.0456674	Crx_Gsc	ENSMUST00000002171.7|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3 	ENSMUST00000111441.3|Psmc3|ENSMUSG00000002102.9|proteasome (prosome, macropain) 26S subunit, ATPase 3
mm10_v2_chr11_-_4095344_4095445	0.0423619	Crx_Gsc	ENSMUST00000004868.5|Mtfp1|ENSMUSG00000004748.5|mitochondrial fission process 1
mm10_v2_chr10_+_80292453_80292645	0.0413836	Crx_Gsc	ENSMUST00000068408.7|Rps15|ENSMUSG00000063457.8|ribosomal protein S15 	ENSMUST00000062674.6|Rps15|ENSMUSG00000063457.8|ribosomal protein S15
mm10_v2_chr9_+_37528071_37528148	0.035169	Crx_Gsc	ENSMUST00000002011.7|Esam|ENSMUSG00000001946.7|endothelial cell-specific adhesion molecule
mm10_v2_chr7_-_103741322_103741322	0.0272064	Crx_Gsc	ENSMUST00000051346.2|Olfr629|ENSMUSG00000047545.2|olfactory receptor 629
mm10_v2_chr6_+_17749170_17749265	0.0217303	Crx_Gsc	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr5_+_90768511_90768526	0.0209693	Crx_Gsc	ENSMUST00000031319.6|Ppbp|ENSMUSG00000029372.6|pro-platelet basic protein
mm10_v2_chr4_-_40702893_40702937	0.0187147	Crx_Gsc	ENSMUST00000068125.4|Aptx|ENSMUSG00000028411.9|aprataxin
mm10_v2_chr7_+_28810886_28810918	0.0162722	Crx_Gsc	ENSMUST00000038572.8|Hnrnpl|ENSMUSG00000015165.10|heterogeneous nuclear ribonucleoprotein L
mm10_v2_chr15_+_75940952_75941015	0.0101128	Crx_Gsc	ENSMUST00000037260.6|Zfp623|ENSMUSG00000050846.8|zinc finger protein 623
mm10_v2_chr7_+_28810928_28810951	0.0100921	Crx_Gsc	ENSMUST00000174477.1|Hnrnpl|ENSMUSG00000015165.10|heterogeneous nuclear ribonucleoprotein L
mm10_v2_chr4_-_40703154_40703187	0.00669446	Crx_Gsc	ENSMUST00000108103.2|Aptx|ENSMUSG00000028411.9|aprataxin
mm10_v2_chr10_+_59395632_59395632	0.00512341	Crx_Gsc	ENSMUST00000092511.4|Gm10273|ENSMUSG00000069622.4|predicted pseudogene 10273
