mm10_v2_chr16_+_41532851_41532865	9.8806	Nkx3-2	ENSMUST00000078873.4|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr15_-_66969616_66969647	8.95764	Nkx3-2	ENSMUST00000170903.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000166420.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000005256.6|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000164070.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1
mm10_v2_chr10_+_38965515_38965558	8.46592	Nkx3-2	ENSMUST00000019992.5|Lama4|ENSMUSG00000019846.5|laminin, alpha 4
mm10_v2_chr15_-_88978958_88979007	7.15957	Nkx3-2	ENSMUST00000042594.6|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) 	ENSMUST00000109368.1|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm10_v2_chr3_-_82074639_82074716	6.95091	Nkx3-2	ENSMUST00000029635.8|Gucy1b3|ENSMUSG00000028005.8|guanylate cyclase 1, soluble, beta 3
mm10_v2_chr9_-_21037775_21037795	6.35979	Nkx3-2	ENSMUST00000180870.1|Gm26592|ENSMUSG00000097535.1|predicted gene, 26592
mm10_v2_chr5_-_139130159_139130181	5.95226	Nkx3-2	ENSMUST00000129851.1|Prkar1b|ENSMUSG00000025855.7|protein kinase, cAMP dependent regulatory, type I beta
mm10_v2_chr4_+_102421518_102421573	5.43512	Nkx3-2	ENSMUST00000106904.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr2_-_104409992_104409993	5.35279	Nkx3-2	ENSMUST00000149466.1|D430041D05Rik|ENSMUSG00000068373.8|RIKEN cDNA D430041D05 gene 	ENSMUST00000139015.1|D430041D05Rik|ENSMUSG00000068373.8|RIKEN cDNA D430041D05 gene
mm10_v2_chr11_+_43474276_43474340	4.96502	Nkx3-2	ENSMUST00000173002.1|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2 	ENSMUST00000057679.3|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2
mm10_v2_chr17_+_70561739_70561787	4.73013	Nkx3-2	ENSMUST00000097288.2|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr9_+_57940104_57940120	4.65996	Nkx3-2	ENSMUST00000043059.7|Sema7a|ENSMUSG00000038264.7|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm10_v2_chr6_-_136171722_136171849	4.45354	Nkx3-2	ENSMUST00000053880.6|Grin2b|ENSMUSG00000030209.8|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm10_v2_chr6_-_138421379_138421452	4.3045	Nkx3-2	ENSMUST00000163065.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr10_-_86732409_86732429	4.06717	Nkx3-2	ENSMUST00000070435.4|Fabp3-ps1|ENSMUSG00000056366.4|fatty acid binding protein 3, muscle and heart, pseudogene 1
mm10_v2_chr2_-_156992021_156992119	3.96162	Nkx3-2	ENSMUST00000109558.1|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3 	ENSMUST00000069600.6|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3 	ENSMUST00000072298.6|Ndrg3|ENSMUSG00000027634.8|N-myc downstream regulated gene 3
mm10_v2_chr8_+_104101625_104101650	3.94742	Nkx3-2	ENSMUST00000034339.8|Cdh5|ENSMUSG00000031871.8|cadherin 5
mm10_v2_chr3_+_86070915_86070915	3.70015	Nkx3-2	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr11_+_3332426_3332460	3.68871	Nkx3-2	ENSMUST00000136474.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr2_-_71546745_71546758	3.6771	Nkx3-2	ENSMUST00000024159.6|Dlx2|ENSMUSG00000023391.7|distal-less homeobox 2
mm10_v2_chr15_-_37458523_37458581	3.47413	Nkx3-2	ENSMUST00000116445.2|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr4_-_120747248_120747404	3.39779	Nkx3-2	ENSMUST00000030376.7|Kcnq4|ENSMUSG00000028631.7|potassium voltage-gated channel, subfamily Q, member 4
mm10_v2_chr15_+_75596645_75596662	3.36095	Nkx3-2	ENSMUST00000023243.4|Gpihbp1|ENSMUSG00000022579.4|GPI-anchored HDL-binding protein 1
mm10_v2_chr4_-_4138432_4138480	3.23987	Nkx3-2	ENSMUST00000070375.7|Penk|ENSMUSG00000045573.9|preproenkephalin
mm10_v2_chr14_+_80000292_80000309	3.22258	Nkx3-2	ENSMUST00000088735.3|Olfm4|ENSMUSG00000022026.6|olfactomedin 4
mm10_v2_chr7_+_5057161_5057197	3.1991	Nkx3-2	ENSMUST00000045543.5|Ccdc106|ENSMUSG00000035228.8|coiled-coil domain containing 106
mm10_v2_chr3_-_37419566_37419605	3.1083	Nkx3-2	ENSMUST00000138949.1|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000149449.1|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000108117.2|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000108118.2|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000099130.2|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENSMUST00000052645.6|Nudt6|ENSMUSG00000050174.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6
mm10_v2_chr13_-_92483996_92484037	2.96857	Nkx3-2	ENSMUST00000040106.7|Fam151b|ENSMUSG00000034334.7|family with sequence similarity 151, member B
mm10_v2_chr11_-_98587193_98587368	2.95429	Nkx3-2	ENSMUST00000052919.7|Ormdl3|ENSMUSG00000038150.7|ORM1-like 3 (S. cerevisiae)
mm10_v2_chr8_+_104340594_104340622	2.81879	Nkx3-2	ENSMUST00000034343.4|Cmtm3|ENSMUSG00000031875.6|CKLF-like MARVEL transmembrane domain containing 3
mm10_v2_chr13_+_30136529_30136594	2.78898	Nkx3-2	ENSMUST00000152798.1|Mboat1|ENSMUSG00000038732.8|membrane bound O-acyltransferase domain containing 1
mm10_v2_chr9_+_112234257_112234381	2.75653	Nkx3-2	ENSMUST00000149308.3|2900079G21Rik|ENSMUSG00000087038.3|RIKEN cDNA 2900079G21 gene 	ENSMUST00000144424.2|2900079G21Rik|ENSMUSG00000087038.3|RIKEN cDNA 2900079G21 gene 	ENSMUST00000139552.2|2900079G21Rik|ENSMUSG00000087038.3|RIKEN cDNA 2900079G21 gene
mm10_v2_chr6_+_96115249_96115311	2.72692	Nkx3-2	ENSMUST00000075080.5|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr9_+_106448629_106448655	2.70933	Nkx3-2	ENSMUST00000048527.7|Abhd14b|ENSMUSG00000042073.8|abhydrolase domain containing 14b
mm10_v2_chr4_-_40239779_40239831	2.6789	Nkx3-2	ENSMUST00000037907.6|Ddx58|ENSMUSG00000040296.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
mm10_v2_chr11_-_101987004_101987013	2.6334	Nkx3-2	ENSMUST00000107173.2|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) 	ENSMUST00000107172.1|Dusp3|ENSMUSG00000003518.7|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
mm10_v2_chr6_+_97210689_97210728	2.55905	Nkx3-2	ENSMUST00000044681.6|Arl6ip5|ENSMUSG00000035199.6|ADP-ribosylation factor-like 6 interacting protein 5
mm10_v2_chr7_-_140856254_140856383	2.53998	Nkx3-2	ENSMUST00000026557.8|Bet1l|ENSMUSG00000025484.8|blocked early in transport 1 homolog (S. cerevisiae)-like
mm10_v2_chrX_-_136203637_136203926	2.50109	Nkx3-2	ENSMUST00000151592.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000131510.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000066819.4|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5
mm10_v2_chr2_-_58567157_58567288	2.48428	Nkx3-2	ENSMUST00000056376.5|Acvr1|ENSMUSG00000026836.9|activin A receptor, type 1
mm10_v2_chr16_-_28929658_28929698	2.47071	Nkx3-2	ENSMUST00000100023.1|Mb21d2|ENSMUSG00000051065.8|Mab-21 domain containing 2
mm10_v2_chr19_-_4121536_4121581	2.44795	Nkx3-2	ENSMUST00000025767.7|Aip|ENSMUSG00000024847.8|aryl-hydrocarbon receptor-interacting protein
mm10_v2_chr6_+_86195214_86195251	2.43024	Nkx3-2	ENSMUST00000032066.9|Tgfa|ENSMUSG00000029999.9|transforming growth factor alpha
mm10_v2_chr6_-_125494754_125494791	2.40704	Nkx3-2	ENSMUST00000032492.8|Cd9|ENSMUSG00000030342.8|CD9 antigen
mm10_v2_chr7_+_6415164_6415206	2.40362	Nkx3-2	ENSMUST00000160218.1|Smim17|ENSMUSG00000093536.1|small integral membrane protein 17
mm10_v2_chr19_+_46003468_46003547	2.38542	Nkx3-2	ENSMUST00000099393.2|Hps6|ENSMUSG00000074811.2|Hermansky-Pudlak syndrome 6
mm10_v2_chr8_+_83666827_83666882	2.36285	Nkx3-2	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr8_-_13200576_13200636	2.34669	Nkx3-2	ENSMUST00000165605.2|Grtp1|ENSMUSG00000038515.9|GH regulated TBC protein 1
mm10_v2_chr7_-_35556304_35556304	2.34	Nkx3-2	ENSMUST00000040962.5|Nudt19|ENSMUSG00000034875.5|nudix (nucleoside diphosphate linked moiety X)-type motif 19
mm10_v2_chr8_+_75213944_75213944	2.32154	Nkx3-2	ENSMUST00000139848.1|Rasd2|ENSMUSG00000034472.7|RASD family, member 2
mm10_v2_chr18_+_23752333_23752401	2.28252	Nkx3-2	ENSMUST00000170802.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000155708.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000118826.2|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr3_-_80802789_80802840	2.26504	Nkx3-2	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr2_+_10153563_10153627	2.24957	Nkx3-2	ENSMUST00000026886.7|Itih5|ENSMUSG00000025780.7|inter-alpha (globulin) inhibitor H5
mm10_v2_chr15_+_98092569_98092603	2.2257	Nkx3-2	ENSMUST00000163507.1|Pfkm|ENSMUSG00000033065.7|phosphofructokinase, muscle
mm10_v2_chr3_+_123267445_123267500	2.20901	Nkx3-2	ENSMUST00000047923.7|Sec24d|ENSMUSG00000039234.7|Sec24 related gene family, member D (S. cerevisiae)
mm10_v2_chr4_-_4138817_4138828	2.19153	Nkx3-2	ENSMUST00000133567.1|Penk|ENSMUSG00000045573.9|preproenkephalin
mm10_v2_chr5_+_28165690_28165717	2.18041	Nkx3-2	ENSMUST00000036177.7|En2|ENSMUSG00000039095.7|engrailed 2
mm10_v2_chr1_+_11414089_11414146	2.17212	Nkx3-2	ENSMUST00000048613.7|A830018L16Rik|ENSMUSG00000057715.7|RIKEN cDNA A830018L16 gene 	ENSMUST00000171690.2|A830018L16Rik|ENSMUSG00000057715.7|RIKEN cDNA A830018L16 gene 	ENSMUST00000137824.1|A830018L16Rik|ENSMUSG00000057715.7|RIKEN cDNA A830018L16 gene 	ENSMUST00000135014.1|A830018L16Rik|ENSMUSG00000057715.7|RIKEN cDNA A830018L16 gene 	ENSMUST00000179089.1|A830018L16Rik|ENSMUSG00000095719.1|RIKEN cDNA A830018L16 gene
mm10_v2_chrX_+_99821021_99821021	2.16852	Nkx3-2	ENSMUST00000096363.2|Tmem28|ENSMUSG00000071719.2|transmembrane protein 28
mm10_v2_chr7_-_126897424_126897483	2.16603	Nkx3-2	ENSMUST00000120007.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr11_-_72489904_72489979	2.16163	Nkx3-2	ENSMUST00000045303.3|Spns2|ENSMUSG00000040447.9|spinster homolog 2
mm10_v2_chr11_-_35798884_35798884	2.15072	Nkx3-2	ENSMUST00000160726.2|Fbll1|ENSMUSG00000051062.5|fibrillarin-like 1
mm10_v2_chr4_+_149586432_149586511	2.14646	Nkx3-2	ENSMUST00000105691.1|Clstn1|ENSMUSG00000039953.7|calsyntenin 1
mm10_v2_chr4_-_129121699_129121740	2.14299	Nkx3-2	ENSMUST00000135763.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000149763.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000164649.1|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr18_+_37447641_37447674	2.12157	Nkx3-2	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr19_-_10881723_10881766	2.10351	Nkx3-2	ENSMUST00000144681.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr15_+_102102926_102102988	2.06775	Nkx3-2	ENSMUST00000169627.1|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase 	ENSMUST00000046144.9|Tenc1|ENSMUSG00000037003.9|tensin like C1 domain-containing phosphatase
mm10_v2_chr15_-_45114926_45114938	2.05902	Nkx3-2	ENSMUST00000022967.5|Kcnv1|ENSMUSG00000022342.5|potassium channel, subfamily V, member 1
mm10_v2_chr15_-_102625061_102625100	1.95416	Nkx3-2	ENSMUST00000184077.1|ATF7|ENSMUSG00000099083.1|Cyclic AMP-dependent transcription factor ATF-7  	ENSMUST00000184906.1|ATF7|ENSMUSG00000099083.1|Cyclic AMP-dependent transcription factor ATF-7  	ENSMUST00000169033.1|ATF7|ENSMUSG00000099083.1|Cyclic AMP-dependent transcription factor ATF-7
mm10_v2_chr7_-_19359477_19359488	1.92938	Nkx3-2	ENSMUST00000047036.8|Cd3eap|ENSMUSG00000047649.8|CD3E antigen, epsilon polypeptide associated protein
mm10_v2_chr2_+_25054396_25054468	1.92744	Nkx3-2	ENSMUST00000102931.4|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000074422.7|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000132172.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000114388.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000114386.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor
mm10_v2_chr8_+_45885479_45885494	1.91423	Nkx3-2	ENSMUST00000034053.5|Pdlim3|ENSMUSG00000031636.6|PDZ and LIM domain 3
mm10_v2_chr8_-_122551316_122551333	1.91104	Nkx3-2	ENSMUST00000067252.7|Piezo1|ENSMUSG00000014444.10|piezo-type mechanosensitive ion channel component 1
mm10_v2_chr8_+_94772009_94772009	1.90077	Nkx3-2	ENSMUST00000034230.5|Cx3cl1|ENSMUSG00000031778.6|chemokine (C-X3-C motif) ligand 1
mm10_v2_chr12_-_72408934_72409054	1.89645	Nkx3-2	ENSMUST00000078505.7|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr7_+_24587543_24587543	1.88244	Nkx3-2	ENSMUST00000077191.6|Ethe1|ENSMUSG00000064254.6|ethylmalonic encephalopathy 1
mm10_v2_chr9_+_123150941_123151021	1.86802	Nkx3-2	ENSMUST00000026890.4|Clec3b|ENSMUSG00000025784.4|C-type lectin domain family 3, member b
mm10_v2_chr11_+_70647258_70647294	1.8354	Nkx3-2	ENSMUST00000037534.7|Rnf167|ENSMUSG00000040746.9|ring finger protein 167
mm10_v2_chr17_+_34031787_34031821	1.82105	Nkx3-2	ENSMUST00000044858.8|Rxrb|ENSMUSG00000039656.10|retinoid X receptor beta
mm10_v2_chr4_-_40239700_40239727	1.78924	Nkx3-2	ENSMUST00000142055.1|Ddx58|ENSMUSG00000040296.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
mm10_v2_chr5_+_143363890_143363919	1.7454	Nkx3-2	ENSMUST00000010969.8|Grid2ip|ENSMUSG00000010825.11|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
mm10_v2_chr6_+_83034173_83034252	1.73179	Nkx3-2	ENSMUST00000000707.2|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3 	ENSMUST00000101257.3|Loxl3|ENSMUSG00000000693.4|lysyl oxidase-like 3
mm10_v2_chr2_-_130424242_130424293	1.71966	Nkx3-2	ENSMUST00000089581.4|Pced1a|ENSMUSG00000037773.8|PC-esterase domain containing 1A
mm10_v2_chr18_+_65698253_65698277	1.71365	Nkx3-2	ENSMUST00000115097.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like 	ENSMUST00000117694.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like
mm10_v2_chr15_-_102624922_102624996	1.69844	Nkx3-2	ENSMUST00000183765.1|ATF7|ENSMUSG00000099083.1|Cyclic AMP-dependent transcription factor ATF-7
mm10_v2_chr9_+_40269430_40269441	1.68021	Nkx3-2	ENSMUST00000171835.2|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta
mm10_v2_chr7_-_4844665_4844699	1.64459	Nkx3-2	ENSMUST00000066041.5|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis) 	ENSMUST00000172377.1|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis)
mm10_v2_chr6_+_49367739_49367896	1.60032	Nkx3-2	ENSMUST00000060561.8|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A 	ENSMUST00000121903.1|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A 	ENSMUST00000134786.1|Fam221a|ENSMUSG00000047115.9|family with sequence similarity 221, member A
mm10_v2_chr15_-_76307231_76307389	1.59853	Nkx3-2	ENSMUST00000023222.6|Oplah|ENSMUSG00000022562.7|5-oxoprolinase (ATP-hydrolysing) 	ENSMUST00000164189.1|Oplah|ENSMUSG00000022562.7|5-oxoprolinase (ATP-hydrolysing)
mm10_v2_chr19_-_10881677_10881717	1.59751	Nkx3-2	ENSMUST00000128835.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr2_+_25054355_25054391	1.58395	Nkx3-2	ENSMUST00000100334.4|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000152122.1|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000116574.3|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor 	ENSMUST00000006646.8|Nsmf|ENSMUSG00000006476.13|NMDA receptor synaptonuclear signaling and neuronal migration factor
mm10_v2_chr2_-_35461247_35461271	1.55455	Nkx3-2	ENSMUST00000113001.2|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3 	ENSMUST00000113002.2|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3
mm10_v2_chr3_+_89436699_89436734	1.55407	Nkx3-2	ENSMUST00000038942.3|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1 	ENSMUST00000130858.1|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1
mm10_v2_chr5_+_135009152_135009317	1.52626	Nkx3-2	ENSMUST00000111216.1|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11 	ENSMUST00000046999.8|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11
mm10_v2_chr7_-_79743034_79743088	1.49587	Nkx3-2	ENSMUST00000032761.7|Pex11a|ENSMUSG00000030545.8|peroxisomal biogenesis factor 11 alpha
mm10_v2_chr3_-_87768932_87768960	1.47198	Nkx3-2	ENSMUST00000173184.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172621.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000174759.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172590.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000079083.5|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1
mm10_v2_chr17_+_37046555_37046600	1.42302	Nkx3-2	ENSMUST00000172789.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr11_+_87581041_87581067	1.42093	Nkx3-2	ENSMUST00000018544.5|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000063156.4|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000107960.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr11_+_35121126_35121224	1.4057	Nkx3-2	ENSMUST00000069837.3|Slit3|ENSMUSG00000056427.4|slit homolog 3 (Drosophila)
mm10_v2_chr8_+_125730005_125730028	1.39158	Nkx3-2	ENSMUST00000143504.1|Ntpcr|ENSMUSG00000031851.8|nucleoside-triphosphatase, cancer-related
mm10_v2_chr19_+_8741413_8741461	1.35371	Nkx3-2	ENSMUST00000176381.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr11_+_51763682_51763749	1.33147	Nkx3-2	ENSMUST00000020653.5|Sar1b|ENSMUSG00000020386.5|SAR1 gene homolog B (S. cerevisiae)
mm10_v2_chr15_-_100584075_100584075	1.32678	Nkx3-2	ENSMUST00000184908.1|POU6F1|ENSMUSG00000098598.1|POU domain, class 6, transcription factor 1 (Pou6f1), mRNA
mm10_v2_chrX_+_153139941_153140011	1.32544	Nkx3-2	ENSMUST00000039720.4|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B 	ENSMUST00000144175.2|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B
mm10_v2_chr7_-_125491586_125491596	1.29634	Nkx3-2	ENSMUST00000033006.7|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chr5_-_110839575_110839734	1.28537	Nkx3-2	ENSMUST00000145318.1|Hscb|ENSMUSG00000043510.6|HscB iron-sulfur cluster co-chaperone homolog (E. coli)
mm10_v2_chr2_+_3713478_3713500	1.27961	Nkx3-2	ENSMUST00000115053.2|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr11_-_109722214_109722289	1.27833	Nkx3-2	ENSMUST00000020938.7|Fam20a|ENSMUSG00000020614.7|family with sequence similarity 20, member A
mm10_v2_chr11_+_70017199_70017241	1.2731	Nkx3-2	ENSMUST00000133140.1|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr7_-_24587612_24587665	1.24453	Nkx3-2	ENSMUST00000094705.2|Zfp575|ENSMUSG00000066721.3|zinc finger protein 575
mm10_v2_chr11_-_5707658_5707708	1.23096	Nkx3-2	ENSMUST00000154330.1|Mrps24|ENSMUSG00000020477.4|mitochondrial ribosomal protein S24
mm10_v2_chr16_-_31081363_31081439	1.21985	Nkx3-2	ENSMUST00000055389.7|Xxylt1|ENSMUSG00000047434.7|xyloside xylosyltransferase 1
mm10_v2_chr5_+_122707546_122707654	1.21379	Nkx3-2	ENSMUST00000081554.6|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000031429.7|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000139631.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000142664.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4
mm10_v2_chr7_+_80269632_80269726	1.20985	Nkx3-2	ENSMUST00000032749.5|Vps33b|ENSMUSG00000030534.7|vacuolar protein sorting 33B (yeast)
mm10_v2_chr3_-_67463828_67463943	1.20902	Nkx3-2	ENSMUST00000058981.2|Lxn|ENSMUSG00000047557.2|latexin
mm10_v2_chr17_-_46674255_46674274	1.20274	Nkx3-2	ENSMUST00000024766.6|Rrp36|ENSMUSG00000023971.8|ribosomal RNA processing 36 homolog (S. cerevisiae)
mm10_v2_chr4_-_130359915_130359966	1.19585	Nkx3-2	ENSMUST00000134159.2|Zcchc17|ENSMUSG00000028772.13|zinc finger, CCHC domain containing 17
mm10_v2_chr16_-_18413452_18413494	1.19302	Nkx3-2	ENSMUST00000165430.1|Comt|ENSMUSG00000000326.6|catechol-O-methyltransferase 	ENSMUST00000147720.1|Comt|ENSMUSG00000000326.6|catechol-O-methyltransferase
mm10_v2_chr2_-_130424673_130424728	1.19249	Nkx3-2	ENSMUST00000110277.1|Pced1a|ENSMUSG00000037773.8|PC-esterase domain containing 1A
mm10_v2_chr12_+_69241832_69241901	1.19041	Nkx3-2	ENSMUST00000063445.6|Klhdc1|ENSMUSG00000051890.7|kelch domain containing 1
mm10_v2_chr11_+_70017085_70017146	1.16978	Nkx3-2	ENSMUST00000108589.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr10_+_81628702_81628719	1.16875	Nkx3-2	ENSMUST00000129622.1|Ankrd24|ENSMUSG00000054708.11|ankyrin repeat domain 24
mm10_v2_chr9_-_57158288_57158338	1.14287	Nkx3-2	ENSMUST00000065358.7|Commd4|ENSMUSG00000032299.9|COMM domain containing 4
mm10_v2_chr4_-_132884509_132884523	1.14262	Nkx3-2	ENSMUST00000030698.4|Stx12|ENSMUSG00000028879.4|syntaxin 12
mm10_v2_chr6_-_29216301_29216364	1.14234	Nkx3-2	ENSMUST00000162739.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1 	ENSMUST00000162099.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1 	ENSMUST00000159124.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1
mm10_v2_chr13_+_55622999_55623084	1.12474	Nkx3-2	ENSMUST00000021963.4|Caml|ENSMUSG00000021501.4|calcium modulating ligand
mm10_v2_chr14_+_54360826_54360851	1.12346	Nkx3-2	ENSMUST00000000985.5|Oxa1l|ENSMUSG00000000959.5|oxidase assembly 1-like
mm10_v2_chr4_-_147936713_147936767	1.12265	Nkx3-2	ENSMUST00000105712.1|Plod1|ENSMUSG00000019055.9|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 	ENSMUST00000019199.7|Plod1|ENSMUSG00000019055.9|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
mm10_v2_chr6_-_108185552_108185587	1.09911	Nkx3-2	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr10_+_78425670_78425729	1.07649	Nkx3-2	ENSMUST00000005185.6|Cstb|ENSMUSG00000005054.6|cystatin B
mm10_v2_chr18_+_73863672_73863713	1.07093	Nkx3-2	ENSMUST00000134847.1|Mro|ENSMUSG00000064036.9|maestro
mm10_v2_chr4_-_141598206_141598229	1.05163	Nkx3-2	ENSMUST00000131317.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000006381.4|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1 	ENSMUST00000129602.1|Fblim1|ENSMUSG00000006219.6|filamin binding LIM protein 1
mm10_v2_chr4_-_40948196_40948296	1.03387	Nkx3-2	ENSMUST00000030125.4|Bag1|ENSMUSG00000028416.5|BCL2-associated athanogene 1 	ENSMUST00000108089.1|Bag1|ENSMUSG00000028416.5|BCL2-associated athanogene 1
mm10_v2_chr2_+_28447941_28447941	1.02867	Nkx3-2	ENSMUST00000040324.7|Ppp1r26|ENSMUSG00000035829.7|protein phosphatase 1, regulatory subunit 26
mm10_v2_chr9_-_58313189_58313212	1.02557	Nkx3-2	ENSMUST00000061799.8|Loxl1|ENSMUSG00000032334.9|lysyl oxidase-like 1
mm10_v2_chr11_+_85353156_85353219	1.01527	Nkx3-2	ENSMUST00000108061.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108062.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108056.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000138423.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000074875.4|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000092821.3|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3
mm10_v2_chr11_+_49250583_49250597	1.00574	Nkx3-2	ENSMUST00000129588.1|Mgat1|ENSMUSG00000020346.10|mannoside acetylglucosaminyltransferase 1
mm10_v2_chr1_+_172341197_172341217	0.998367	Nkx3-2	ENSMUST00000056136.3|Kcnj10|ENSMUSG00000044708.5|potassium inwardly-rectifying channel, subfamily J, member 10
mm10_v2_chr13_-_66852017_66852017	0.988053	Nkx3-2	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chr4_-_108032069_108032098	0.982541	Nkx3-2	ENSMUST00000106709.2|Podn|ENSMUSG00000028600.9|podocan
mm10_v2_chr17_-_45686899_45686923	0.968095	Nkx3-2	ENSMUST00000156254.1|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr19_-_6067785_6067865	0.965018	Nkx3-2	ENSMUST00000162575.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000159084.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000161718.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000162810.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000025713.5|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000113543.2|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2 	ENSMUST00000161528.1|Tm7sf2|ENSMUSG00000024799.8|transmembrane 7 superfamily member 2
mm10_v2_chr4_-_123718181_123718195	0.964486	Nkx3-2	ENSMUST00000137312.1|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5 	ENSMUST00000106206.1|Ndufs5|ENSMUSG00000028648.7|NADH dehydrogenase (ubiquinone) Fe-S protein 5
mm10_v2_chr3_-_57575907_57575912	0.955938	Nkx3-2	ENSMUST00000120977.1|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr11_+_49250512_49250572	0.925697	Nkx3-2	ENSMUST00000101293.4|Mgat1|ENSMUSG00000020346.10|mannoside acetylglucosaminyltransferase 1
mm10_v2_chr2_-_35461365_35461449	0.923392	Nkx3-2	ENSMUST00000102794.1|Ggta1|ENSMUSG00000035778.11|glycoprotein galactosyltransferase alpha 1, 3
mm10_v2_chr3_-_57575760_57575836	0.923121	Nkx3-2	ENSMUST00000029380.7|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr2_+_130424321_130424393	0.917001	Nkx3-2	ENSMUST00000128994.1|Vps16|ENSMUSG00000027411.11|vacuolar protein sorting 16 (yeast) 	ENSMUST00000028900.9|Vps16|ENSMUSG00000027411.11|vacuolar protein sorting 16 (yeast)
mm10_v2_chr2_-_32353283_32353311	0.915531	Nkx3-2	ENSMUST00000091089.5|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113350.1|Dnm1|ENSMUSG00000026825.11|dynamin 1
mm10_v2_chr13_-_99344652_99344706	0.907935	Nkx3-2	ENSMUST00000022153.6|Ptcd2|ENSMUSG00000021650.6|pentatricopeptide repeat domain 2
mm10_v2_chr11_-_5741141_5741182	0.880882	Nkx3-2	ENSMUST00000140922.1|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation 	ENSMUST00000093362.5|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation
mm10_v2_chr2_-_164404606_164404621	0.878891	Nkx3-2	ENSMUST00000109359.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000109358.1|Matn4|ENSMUSG00000016995.11|matrilin 4 	ENSMUST00000103103.3|Matn4|ENSMUSG00000016995.11|matrilin 4
mm10_v2_chr16_+_20535475_20535546	0.872668	Nkx3-2	ENSMUST00000090023.6|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit 	ENSMUST00000007216.8|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit
mm10_v2_chr11_+_118433826_118433863	0.85569	Nkx3-2	ENSMUST00000106286.1|C1qtnf1|ENSMUSG00000017446.8|C1q and tumor necrosis factor related protein 1
mm10_v2_chr3_+_89436736_89436761	0.843751	Nkx3-2	ENSMUST00000146630.1|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1 	ENSMUST00000145753.1|Pbxip1|ENSMUSG00000042613.3|pre B cell leukemia transcription factor interacting protein 1
mm10_v2_chr13_+_99344775_99344806	0.831785	Nkx3-2	ENSMUST00000052249.5|Mrps27|ENSMUSG00000041632.5|mitochondrial ribosomal protein S27
mm10_v2_chr18_-_80934054_80934077	0.826107	Nkx3-2	ENSMUST00000091790.3|Atp9b|ENSMUSG00000024566.8|ATPase, class II, type 9B
mm10_v2_chr9_-_101034892_101034904	0.822275	Nkx3-2	ENSMUST00000035116.5|Pccb|ENSMUSG00000032527.7|propionyl Coenzyme A carboxylase, beta polypeptide
mm10_v2_chr7_-_79842287_79842352	0.81033	Nkx3-2	ENSMUST00000049004.6|Anpep|ENSMUSG00000039062.9|alanyl (membrane) aminopeptidase
mm10_v2_chr4_+_126096623_126096708	0.808237	Nkx3-2	ENSMUST00000055575.7|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10 	ENSMUST00000179323.1|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10 	ENSMUST00000151831.1|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10
mm10_v2_chr6_-_124863877_124863996	0.802222	Nkx3-2	ENSMUST00000046893.7|Gpr162|ENSMUSG00000038390.9|G protein-coupled receptor 162
mm10_v2_chr11_-_32267547_32267707	0.792143	Nkx3-2	ENSMUST00000109389.2|Nprl3|ENSMUSG00000020289.9|nitrogen permease regulator-like 3 	ENSMUST00000129010.1|Nprl3|ENSMUSG00000020289.9|nitrogen permease regulator-like 3 	ENSMUST00000020530.5|Nprl3|ENSMUSG00000020289.9|nitrogen permease regulator-like 3
mm10_v2_chr1_+_164048214_164048234	0.788071	Nkx3-2	ENSMUST00000027874.5|Sele|ENSMUSG00000026582.6|selectin, endothelial cell
mm10_v2_chr11_+_72689997_72690015	0.785415	Nkx3-2	ENSMUST00000155998.1|Ankfy1|ENSMUSG00000020790.8|ankyrin repeat and FYVE domain containing 1
mm10_v2_chr2_-_102400863_102400970	0.784416	Nkx3-2	ENSMUST00000102573.1|Trim44|ENSMUSG00000027189.10|tripartite motif-containing 44
mm10_v2_chr8_+_113635550_113635597	0.78193	Nkx3-2	ENSMUST00000179926.1|Mon1b|ENSMUSG00000078908.3|MON1 homolog b (yeast)
mm10_v2_chr1_-_193130201_193130257	0.768285	Nkx3-2	ENSMUST00000085555.1|Diexf|ENSMUSG00000016181.4|digestive organ expansion factor homolog (zebrafish)
mm10_v2_chr11_-_69560186_69560213	0.76606	Nkx3-2	ENSMUST00000004036.5|Efnb3|ENSMUSG00000003934.5|ephrin B3
mm10_v2_chr14_-_88471396_88471396	0.759451	Nkx3-2	ENSMUST00000061628.5|Pcdh20|ENSMUSG00000050505.6|protocadherin 20
mm10_v2_chr8_+_85083269_85083297	0.750491	Nkx3-2	ENSMUST00000034121.9|Man2b1|ENSMUSG00000005142.9|mannosidase 2, alpha B1
mm10_v2_chr4_+_63558748_63558859	0.738066	Nkx3-2	ENSMUST00000077709.4|6330416G13Rik|ENSMUSG00000045917.11|RIKEN cDNA 6330416G13 gene
mm10_v2_chr19_+_45047557_45047576	0.735644	Nkx3-2	ENSMUST00000062213.5|Sfxn3|ENSMUSG00000025212.10|sideroflexin 3 	ENSMUST00000111954.4|Sfxn3|ENSMUSG00000025212.10|sideroflexin 3 	ENSMUST00000084493.6|Sfxn3|ENSMUSG00000025212.10|sideroflexin 3
mm10_v2_chr8_-_107263248_107263248	0.733367	Nkx3-2	ENSMUST00000080443.6|Rps18-ps3|ENSMUSG00000057657.3|ribosomal protein S18, pseudogene 3
mm10_v2_chr13_-_98316967_98317006	0.732152	Nkx3-2	ENSMUST00000022163.8|Btf3|ENSMUSG00000021660.8|basic transcription factor 3 	ENSMUST00000152704.1|Btf3|ENSMUSG00000021660.8|basic transcription factor 3
mm10_v2_chr2_-_153632679_153632757	0.730944	Nkx3-2	ENSMUST00000109782.1|Commd7|ENSMUSG00000056941.11|COMM domain containing 7
mm10_v2_chr2_+_32363004_32363142	0.711054	Nkx3-2	ENSMUST00000132028.1|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1 	ENSMUST00000136079.1|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1
mm10_v2_chr7_-_28741780_28741843	0.696219	Nkx3-2	ENSMUST00000056078.8|Mrps12|ENSMUSG00000045948.8|mitochondrial ribosomal protein S12
mm10_v2_chr3_-_89245829_89245899	0.694014	Nkx3-2	ENSMUST00000041022.8|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr11_+_4883186_4883222	0.690692	Nkx3-2	ENSMUST00000139737.1|Nipsnap1|ENSMUSG00000034285.9|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
mm10_v2_chr17_+_87078255_87078267	0.681171	Nkx3-2	ENSMUST00000090731.5|Gm5499|ENSMUSG00000071035.4|predicted pseudogene 5499
mm10_v2_chr1_-_161070613_161070674	0.678174	Nkx3-2	ENSMUST00000035430.3|Dars2|ENSMUSG00000026709.4|aspartyl-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr11_+_97703394_97703455	0.672996	Nkx3-2	ENSMUST00000103147.4|Psmb3|ENSMUSG00000069744.7|proteasome (prosome, macropain) subunit, beta type 3
mm10_v2_chr9_+_94669876_94669928	0.668587	Nkx3-2	ENSMUST00000033463.9|Slc9a9|ENSMUSG00000031129.9|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm10_v2_chr2_-_119662756_119662835	0.661216	Nkx3-2	ENSMUST00000028768.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 	ENSMUST00000110801.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 	ENSMUST00000110802.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
mm10_v2_chr8_-_112011266_112011296	0.656664	Nkx3-2	ENSMUST00000164470.1|Kars|ENSMUSG00000031948.7|lysyl-tRNA synthetase 	ENSMUST00000093120.5|Kars|ENSMUSG00000031948.7|lysyl-tRNA synthetase
mm10_v2_chr19_+_55741810_55741842	0.635127	Nkx3-2	ENSMUST00000111657.3|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000061496.9|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000041717.7|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111662.4|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr19_-_53371766_53371766	0.633744	Nkx3-2	ENSMUST00000086887.1|Gm10197|ENSMUSG00000067085.1|predicted gene 10197
mm10_v2_chr5_+_63649335_63649451	0.619007	Nkx3-2	ENSMUST00000159584.1|3110047P20Rik|ENSMUSG00000090061.3|RIKEN cDNA 3110047P20 gene
mm10_v2_chr8_+_112011359_112011388	0.612239	Nkx3-2	ENSMUST00000052138.9|Terf2ip|ENSMUSG00000033430.9|telomeric repeat binding factor 2, interacting protein
mm10_v2_chr8_-_26015577_26015626	0.608302	Nkx3-2	ENSMUST00000016138.9|Fnta|ENSMUSG00000015994.9|farnesyltransferase, CAAX box, alpha
mm10_v2_chr2_-_157566319_157566361	0.595581	Nkx3-2	ENSMUST00000109528.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human) 	ENSMUST00000088494.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr8_+_109565892_109566031	0.564894	Nkx3-2	ENSMUST00000034159.1|Txnl4b|ENSMUSG00000031723.2|thioredoxin-like 4B
mm10_v2_chr19_-_10101501_10101532	0.563659	Nkx3-2	ENSMUST00000025567.7|Fads2|ENSMUSG00000024665.7|fatty acid desaturase 2
mm10_v2_chr2_+_26330391_26330441	0.557934	Nkx3-2	ENSMUST00000114134.2|Gpsm1|ENSMUSG00000026930.9|G-protein signalling modulator 1 (AGS3-like, C. elegans) 	ENSMUST00000127453.1|Gpsm1|ENSMUSG00000026930.9|G-protein signalling modulator 1 (AGS3-like, C. elegans)
mm10_v2_chr4_+_115828061_115828103	0.532636	Nkx3-2	ENSMUST00000030477.3|Mob3c|ENSMUSG00000028709.3|MOB kinase activator 3C
mm10_v2_chr9_-_86695897_86695958	0.530511	Nkx3-2	ENSMUST00000034989.8|Me1|ENSMUSG00000032418.9|malic enzyme 1, NADP(+)-dependent, cytosolic
mm10_v2_chr9_+_105053239_105053259	0.529026	Nkx3-2	ENSMUST00000035177.8|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3 	ENSMUST00000149243.1|Mrpl3|ENSMUSG00000032563.9|mitochondrial ribosomal protein L3
mm10_v2_chr8_+_113635787_113635842	0.528752	Nkx3-2	ENSMUST00000035777.8|Mon1b|ENSMUSG00000078908.3|MON1 homolog b (yeast)
mm10_v2_chr10_+_43479140_43479194	0.52759	Nkx3-2	ENSMUST00000167488.1|Bend3|ENSMUSG00000038214.8|BEN domain containing 3 	ENSMUST00000040147.7|Bend3|ENSMUSG00000038214.8|BEN domain containing 3
mm10_v2_chr6_-_92534855_92534890	0.520964	Nkx3-2	ENSMUST00000113446.1|Prickle2|ENSMUSG00000030020.7|prickle homolog 2 (Drosophila)
mm10_v2_chr7_-_44306903_44306959	0.503743	Nkx3-2	ENSMUST00000004587.9|Clec11a|ENSMUSG00000004473.9|C-type lectin domain family 11, member a
mm10_v2_chr10_-_127211528_127211626	0.496544	Nkx3-2	ENSMUST00000013970.7|Pip4k2c|ENSMUSG00000025417.7|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm10_v2_chr8_-_112011320_112011372	0.484451	Nkx3-2	ENSMUST00000034426.6|Kars|ENSMUSG00000031948.7|lysyl-tRNA synthetase
mm10_v2_chr4_-_108031938_108031961	0.460885	Nkx3-2	ENSMUST00000106708.1|Podn|ENSMUSG00000028600.9|podocan
mm10_v2_chr7_+_18987518_18987524	0.456054	Nkx3-2	ENSMUST00000063563.7|Nanos2|ENSMUSG00000051965.7|nanos homolog 2 (Drosophila)
mm10_v2_chr2_-_91182848_91182933	0.439618	Nkx3-2	ENSMUST00000111370.2|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000111376.1|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000099723.2|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain
mm10_v2_chr17_-_34628380_34628510	0.438241	Nkx3-2	ENSMUST00000167097.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr9_-_52679429_52679429	0.437846	Nkx3-2	ENSMUST00000098768.2|AI593442|ENSMUSG00000078307.2|expressed sequence AI593442
mm10_v2_chr7_+_30169861_30169912	0.428053	Nkx3-2	ENSMUST00000085668.4|Gm5113|ENSMUSG00000066647.5|predicted gene 5113
mm10_v2_chr5_-_144223516_144223618	0.425163	Nkx3-2	ENSMUST00000085701.6|Tecpr1|ENSMUSG00000066621.6|tectonin beta-propeller repeat containing 1
mm10_v2_chr1_-_121332545_121332568	0.411638	Nkx3-2	ENSMUST00000161068.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr11_-_89302545_89302567	0.408353	Nkx3-2	ENSMUST00000061728.3|Nog|ENSMUSG00000048616.3|noggin
mm10_v2_chr11_-_101417615_101417615	0.394969	Nkx3-2	ENSMUST00000070395.8|Aarsd1|ENSMUSG00000075528.7|alanyl-tRNA synthetase domain containing 1
mm10_v2_chr17_+_25875492_25875536	0.394234	Nkx3-2	ENSMUST00000026827.8|0610011F06Rik|ENSMUSG00000025731.9|RIKEN cDNA 0610011F06 gene 	ENSMUST00000169308.1|0610011F06Rik|ENSMUSG00000025731.9|RIKEN cDNA 0610011F06 gene 	ENSMUST00000169085.1|0610011F06Rik|ENSMUSG00000025731.9|RIKEN cDNA 0610011F06 gene 	ENSMUST00000163356.1|0610011F06Rik|ENSMUSG00000025731.9|RIKEN cDNA 0610011F06 gene
mm10_v2_chr9_-_106199253_106199286	0.390006	Nkx3-2	ENSMUST00000140761.1|Ppm1m|ENSMUSG00000020253.8|protein phosphatase 1M
mm10_v2_chr6_+_88902251_88902351	0.372046	Nkx3-2	ENSMUST00000055022.8|Tpra1|ENSMUSG00000002871.8|transmembrane protein, adipocyte asscociated 1
mm10_v2_chr7_-_25882407_25882407	0.362878	Nkx3-2	ENSMUST00000163316.2|Gm6434|ENSMUSG00000091233.2|predicted gene 6434
mm10_v2_chr11_-_120731944_120732114	0.360414	Nkx3-2	ENSMUST00000154565.1|Cbr2|ENSMUSG00000025150.4|carbonyl reductase 2 	ENSMUST00000026148.2|Cbr2|ENSMUSG00000025150.4|carbonyl reductase 2
mm10_v2_chr1_+_180904274_180904343	0.359758	Nkx3-2	ENSMUST00000027802.7|Pycr2|ENSMUSG00000026520.7|pyrroline-5-carboxylate reductase family, member 2
mm10_v2_chr3_+_89177463_89177543	0.33955	Nkx3-2	ENSMUST00000029684.8|Scamp3|ENSMUSG00000028049.9|secretory carrier membrane protein 3 	ENSMUST00000120697.1|Scamp3|ENSMUSG00000028049.9|secretory carrier membrane protein 3 	ENSMUST00000098941.4|Scamp3|ENSMUSG00000028049.9|secretory carrier membrane protein 3
mm10_v2_chr1_-_160077918_160077944	0.336773	Nkx3-2	ENSMUST00000028061.3|4930562F07Rik|ENSMUSG00000026729.4|RIKEN cDNA 4930562F07 gene
mm10_v2_chr3_+_89245952_89245978	0.333945	Nkx3-2	ENSMUST00000040888.5|Krtcap2|ENSMUSG00000042747.6|keratinocyte associated protein 2
mm10_v2_chr7_+_3694512_3694552	0.323913	Nkx3-2	ENSMUST00000108627.3|Tsen34|ENSMUSG00000035585.10|tRNA splicing endonuclease 34 homolog (S. cerevisiae)
mm10_v2_chr2_+_32363192_32363262	0.320294	Nkx3-2	ENSMUST00000048964.7|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1 	ENSMUST00000113332.1|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1
mm10_v2_chr2_-_147085445_147085483	0.318252	Nkx3-2	ENSMUST00000067020.2|Nkx2-4|ENSMUSG00000054160.2|NK2 homeobox 4
mm10_v2_chr5_-_143527977_143528036	0.316519	Nkx3-2	ENSMUST00000100489.3|Rac1|ENSMUSG00000001847.8|RAS-related C3 botulinum substrate 1 	ENSMUST00000080537.7|Rac1|ENSMUSG00000001847.8|RAS-related C3 botulinum substrate 1
mm10_v2_chr17_+_46161111_46161148	0.303325	Nkx3-2	ENSMUST00000166563.1|Gtpbp2|ENSMUSG00000023952.7|GTP binding protein 2
mm10_v2_chr1_-_121332571_121332589	0.282194	Nkx3-2	ENSMUST00000071064.6|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr8_+_80494032_80494065	0.272657	Nkx3-2	ENSMUST00000063359.6|Gypa|ENSMUSG00000051839.6|glycophorin A
mm10_v2_chr7_+_128237357_128237357	0.244594	Nkx3-2	ENSMUST00000044660.5|Armc5|ENSMUSG00000042178.5|armadillo repeat containing 5
mm10_v2_chr5_-_100674230_100674284	0.208221	Nkx3-2	ENSMUST00000031262.7|Coq2|ENSMUSG00000029319.7|coenzyme Q2 homolog, prenyltransferase (yeast)
mm10_v2_chr1_+_63730614_63730657	0.201015	Nkx3-2	ENSMUST00000027103.6|Fastkd2|ENSMUSG00000025962.9|FAST kinase domains 2
mm10_v2_chrX_+_166170449_166170512	0.192186	Nkx3-2	ENSMUST00000130880.2|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000056410.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000096252.3|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000087169.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8
mm10_v2_chr5_-_24445254_24445287	0.184557	Nkx3-2	ENSMUST00000030800.6|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr4_+_130360132_130360208	0.176698	Nkx3-2	ENSMUST00000105994.3|Snrnp40|ENSMUSG00000074088.6|small nuclear ribonucleoprotein 40 (U5)
mm10_v2_chr4_-_133872304_133872346	0.152046	Nkx3-2	ENSMUST00000157067.2|Rps6ka1|ENSMUSG00000003644.11|ribosomal protein S6 kinase polypeptide 1
mm10_v2_chr15_+_11064764_11064797	0.151032	Nkx3-2	ENSMUST00000061318.7|Adamts12|ENSMUSG00000047497.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm10_v2_chr2_+_32363163_32363177	0.143097	Nkx3-2	ENSMUST00000145635.1|Ciz1|ENSMUSG00000039205.10|CDKN1A interacting zinc finger protein 1
mm10_v2_chr8_+_106510853_106510924	0.132495	Nkx3-2	ENSMUST00000080797.6|Cdh3|ENSMUSG00000061048.7|cadherin 3
mm10_v2_chr15_-_98296083_98296157	0.131525	Nkx3-2	ENSMUST00000169721.1|Zfp641|ENSMUSG00000022987.5|zinc finger protein 641 	ENSMUST00000023722.5|Zfp641|ENSMUSG00000022987.5|zinc finger protein 641
mm10_v2_chr7_+_125829653_125829668	0.117668	Nkx3-2	ENSMUST00000124223.1|D430042O09Rik|ENSMUSG00000032743.9|RIKEN cDNA D430042O09 gene
mm10_v2_chr1_-_171247096_171247122	0.108334	Nkx3-2	ENSMUST00000013737.6|Ndufs2|ENSMUSG00000013593.6|NADH dehydrogenase (ubiquinone) Fe-S protein 2 	ENSMUST00000111318.1|Ndufs2|ENSMUSG00000013593.6|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm10_v2_chr13_-_19619820_19619830	0.104696	Nkx3-2	ENSMUST00000002885.6|Epdr1|ENSMUSG00000002808.6|ependymin related protein 1 (zebrafish)
mm10_v2_chr5_+_19227046_19227066	0.0853975	Nkx3-2	ENSMUST00000088516.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr10_-_30842765_30842801	0.0714455	Nkx3-2	ENSMUST00000019924.8|Hey2|ENSMUSG00000019789.8|hairy/enhancer-of-split related with YRPW motif 2
mm10_v2_chr7_+_127904079_127904125	0.0611884	Nkx3-2	ENSMUST00000071056.7|Bckdk|ENSMUSG00000030802.8|branched chain ketoacid dehydrogenase kinase
mm10_v2_chr7_-_141434402_141434486	0.0586255	Nkx3-2	ENSMUST00000136354.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chr3_+_109573907_109573990	0.0569236	Nkx3-2	ENSMUST00000106576.2|Vav3|ENSMUSG00000033721.10|vav 3 oncogene
mm10_v2_chr2_-_167062981_167063048	0.0536393	Nkx3-2	ENSMUST00000048988.7|Znfx1|ENSMUSG00000039501.8|zinc finger, NFX1-type containing 1
mm10_v2_chr17_-_75551838_75551946	0.0532592	Nkx3-2	ENSMUST00000112507.3|Fam98a|ENSMUSG00000002017.9|family with sequence similarity 98, member A
mm10_v2_chr12_-_85280306_85280347	0.0336433	Nkx3-2	ENSMUST00000117138.2|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr4_-_40702893_40702937	0.0276956	Nkx3-2	ENSMUST00000068125.4|Aptx|ENSMUSG00000028411.9|aprataxin
mm10_v2_chr19_+_55898553_55898606	0.010788	Nkx3-2	ENSMUST00000148666.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr11_+_109650921_109651003	0.00750072	Nkx3-2	ENSMUST00000049527.6|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
