mm10_v2_chr1_-_14310198_14310218	5.81577	Rorc_Nr1d1	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr7_-_79386943_79387027	5.4104	Rorc_Nr1d1	ENSMUST00000053718.8|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1 	ENSMUST00000179243.1|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1
mm10_v2_chr12_-_34528844_34528904	5.16704	Rorc_Nr1d1	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr11_-_84069179_84069261	4.41286	Rorc_Nr1d1	ENSMUST00000138208.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chrX_+_103422010_103422010	4.03049	Rorc_Nr1d1	ENSMUST00000182089.1|Gm26992|ENSMUSG00000098078.1|predicted gene, 26992
mm10_v2_chr3_-_89764581_89764646	3.91761	Rorc_Nr1d1	ENSMUST00000029562.3|Chrnb2|ENSMUSG00000027950.3|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
mm10_v2_chr5_+_64803513_64803530	2.74757	Rorc_Nr1d1	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr13_+_6548154_6548174	2.70782	Rorc_Nr1d1	ENSMUST00000021611.8|Pitrm1|ENSMUSG00000021193.9|pitrilysin metallepetidase 1
mm10_v2_chr11_+_94327984_94328029	2.59984	Rorc_Nr1d1	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr7_+_45705088_45705292	2.23537	Rorc_Nr1d1	ENSMUST00000080885.3|Dbp|ENSMUSG00000059824.4|D site albumin promoter binding protein
mm10_v2_chr11_+_94328242_94328261	2.09306	Rorc_Nr1d1	ENSMUST00000021227.5|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr15_-_50882806_50882822	2.00282	Rorc_Nr1d1	ENSMUST00000184885.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr6_+_61180313_61180400	1.8036	Rorc_Nr1d1	ENSMUST00000126214.1|Ccser1|ENSMUSG00000039578.10|coiled-coil serine rich 1
mm10_v2_chr5_+_64970069_64970089	1.6168	Rorc_Nr1d1	ENSMUST00000031080.8|Fam114a1|ENSMUSG00000029185.8|family with sequence similarity 114, member A1
mm10_v2_chr6_-_93913678_93913719	1.59304	Rorc_Nr1d1	ENSMUST00000093769.5|Magi1|ENSMUSG00000045095.10|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm10_v2_chr10_+_57784859_57784903	1.54651	Rorc_Nr1d1	ENSMUST00000020024.5|Fabp7|ENSMUSG00000019874.5|fatty acid binding protein 7, brain
mm10_v2_chr3_-_101307079_101307079	1.52134	Rorc_Nr1d1	ENSMUST00000097146.2|Gm10355|ENSMUSG00000072381.2|predicted gene 10355
mm10_v2_chr1_+_6734827_6734874	1.50001	Rorc_Nr1d1	ENSMUST00000139838.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr1_-_180193475_180193492	1.43566	Rorc_Nr1d1	ENSMUST00000160482.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3 	ENSMUST00000170472.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3
mm10_v2_chr3_-_84304762_84304809	1.40005	Rorc_Nr1d1	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr6_-_88874045_88874070	1.30471	Rorc_Nr1d1	ENSMUST00000038409.5|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chrX_-_16911774_16911774	1.29314	Rorc_Nr1d1	ENSMUST00000040134.7|Ndp|ENSMUSG00000040138.7|Norrie disease (pseudoglioma) (human)
mm10_v2_chr16_-_20730544_20730627	1.25755	Rorc_Nr1d1	ENSMUST00000076422.5|Thpo|ENSMUSG00000022847.8|thrombopoietin
mm10_v2_chr4_+_98546919_98546973	1.23164	Rorc_Nr1d1	ENSMUST00000030290.7|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr7_-_134232125_134232146	1.19543	Rorc_Nr1d1	ENSMUST00000127524.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr11_-_100527896_100528000	1.14278	Rorc_Nr1d1	ENSMUST00000107389.1|Acly|ENSMUSG00000020917.11|ATP citrate lyase 	ENSMUST00000007131.9|Acly|ENSMUSG00000020917.11|ATP citrate lyase
mm10_v2_chr14_+_73142490_73142564	1.13431	Rorc_Nr1d1	ENSMUST00000170370.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000164822.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000165429.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr6_+_65778988_65779101	1.10949	Rorc_Nr1d1	ENSMUST00000031976.7|Prdm5|ENSMUSG00000029913.8|PR domain containing 5 	ENSMUST00000081219.7|Prdm5|ENSMUSG00000029913.8|PR domain containing 5 	ENSMUST00000031973.6|Prdm5|ENSMUSG00000029913.8|PR domain containing 5 	ENSMUST00000172638.1|Prdm5|ENSMUSG00000029913.8|PR domain containing 5
mm10_v2_chr17_-_51810866_51810919	1.09533	Rorc_Nr1d1	ENSMUST00000176669.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr4_+_11579647_11579674	1.07529	Rorc_Nr1d1	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr7_+_114768736_114768763	0.986361	Rorc_Nr1d1	ENSMUST00000117543.1|Insc|ENSMUSG00000048782.9|inscuteable homolog (Drosophila)
mm10_v2_chr2_+_61593125_61593175	0.978394	Rorc_Nr1d1	ENSMUST00000112494.1|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator
mm10_v2_chr2_-_5862923_5862923	0.956558	Rorc_Nr1d1	ENSMUST00000071016.2|Gm13199|ENSMUSG00000056718.2|predicted gene 13199
mm10_v2_chr11_-_100527862_100527878	0.950264	Rorc_Nr1d1	ENSMUST00000107385.1|Acly|ENSMUSG00000020917.11|ATP citrate lyase
mm10_v2_chr3_+_79884496_79884571	0.949454	Rorc_Nr1d1	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr16_-_37384915_37384931	0.94628	Rorc_Nr1d1	ENSMUST00000114787.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114782.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000023526.2|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114775.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr7_-_134232005_134232054	0.915802	Rorc_Nr1d1	ENSMUST00000134504.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr2_+_61593077_61593102	0.899971	Rorc_Nr1d1	ENSMUST00000112495.1|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator 	ENSMUST00000112501.2|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator
mm10_v2_chr16_-_37384940_37384978	0.889278	Rorc_Nr1d1	ENSMUST00000114781.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114780.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr7_+_113207465_113207595	0.864417	Rorc_Nr1d1	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr14_-_54577578_54577661	0.863611	Rorc_Nr1d1	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr8_+_119862239_119862305	0.862436	Rorc_Nr1d1	ENSMUST00000034287.8|Klhl36|ENSMUSG00000031828.8|kelch-like 36
mm10_v2_chr5_-_115484297_115484387	0.765873	Rorc_Nr1d1	ENSMUST00000112067.1|Sirt4|ENSMUSG00000029524.10|sirtuin 4
mm10_v2_chr7_-_122021143_122021222	0.753343	Rorc_Nr1d1	ENSMUST00000033160.8|Gga2|ENSMUSG00000030872.8|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm10_v2_chr1_+_143739551_143739566	0.742125	Rorc_Nr1d1	ENSMUST00000050491.9|Glrx2|ENSMUSG00000018196.12|glutaredoxin 2 (thioltransferase)
mm10_v2_chr8_-_85080652_85080673	0.739666	Rorc_Nr1d1	ENSMUST00000152785.1|Wdr83|ENSMUSG00000005150.10|WD repeat domain containing 83
mm10_v2_chr8_-_85080679_85080746	0.738362	Rorc_Nr1d1	ENSMUST00000093357.5|Wdr83|ENSMUSG00000005150.10|WD repeat domain containing 83
mm10_v2_chr3_+_79884576_79884597	0.727989	Rorc_Nr1d1	ENSMUST00000145992.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr6_+_29361410_29361461	0.712589	Rorc_Nr1d1	ENSMUST00000156163.1|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr9_+_46012810_46012821	0.689223	Rorc_Nr1d1	ENSMUST00000126865.1|Sik3|ENSMUSG00000034135.8|SIK family kinase 3
mm10_v2_chr12_+_116047713_116047807	0.633248	Rorc_Nr1d1	ENSMUST00000073551.5|Zfp386|ENSMUSG00000042063.11|zinc finger protein 386 (Kruppel-like) 	ENSMUST00000183125.1|Zfp386|ENSMUSG00000042063.11|zinc finger protein 386 (Kruppel-like)
mm10_v2_chr2_+_155751117_155751284	0.629196	Rorc_Nr1d1	ENSMUST00000029140.5|Procr|ENSMUSG00000027611.6|protein C receptor, endothelial 	ENSMUST00000132608.1|Procr|ENSMUSG00000027611.6|protein C receptor, endothelial
mm10_v2_chr12_-_100159601_100159672	0.608488	Rorc_Nr1d1	ENSMUST00000021596.7|Nrde2|ENSMUSG00000021179.7|nrde-2 necessary for RNA interference, domain containing
mm10_v2_chr3_-_10208569_10208586	0.589066	Rorc_Nr1d1	ENSMUST00000029041.4|Fabp4|ENSMUSG00000062515.2|fatty acid binding protein 4, adipocyte
mm10_v2_chr9_-_101034857_101034877	0.567731	Rorc_Nr1d1	ENSMUST00000142676.1|Pccb|ENSMUSG00000032527.7|propionyl Coenzyme A carboxylase, beta polypeptide 	ENSMUST00000149322.1|Pccb|ENSMUSG00000032527.7|propionyl Coenzyme A carboxylase, beta polypeptide
mm10_v2_chr9_-_101034892_101034904	0.551401	Rorc_Nr1d1	ENSMUST00000035116.5|Pccb|ENSMUSG00000032527.7|propionyl Coenzyme A carboxylase, beta polypeptide
mm10_v2_chr14_-_98169542_98169595	0.542006	Rorc_Nr1d1	ENSMUST00000069334.7|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila) 	ENSMUST00000071533.6|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila)
mm10_v2_chr2_-_170427828_170427852	0.541321	Rorc_Nr1d1	ENSMUST00000013667.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000109152.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000068137.4|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1
mm10_v2_chr7_-_142661305_142661314	0.531091	Rorc_Nr1d1	ENSMUST00000105936.1|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr7_-_126922887_126922926	0.513822	Rorc_Nr1d1	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chrX_+_42151002_42151019	0.489528	Rorc_Nr1d1	ENSMUST00000123245.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr17_+_45686322_45686402	0.487036	Rorc_Nr1d1	ENSMUST00000024734.7|Mrpl14|ENSMUSG00000023939.7|mitochondrial ribosomal protein L14
mm10_v2_chr7_+_127211608_127211711	0.482752	Rorc_Nr1d1	ENSMUST00000032910.6|Mylpf|ENSMUSG00000030672.6|myosin light chain, phosphorylatable, fast skeletal muscle
mm10_v2_chr12_-_84876479_84876532	0.478207	Rorc_Nr1d1	ENSMUST00000163189.1|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000110254.2|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000002073.6|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2
mm10_v2_chr2_+_91710852_91710879	0.47421	Rorc_Nr1d1	ENSMUST00000128140.1|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1 	ENSMUST00000140183.1|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1
mm10_v2_chrX_+_70385870_70385944	0.469268	Rorc_Nr1d1	ENSMUST00000053981.5|1110012L19Rik|ENSMUSG00000045237.5|RIKEN cDNA 1110012L19 gene
mm10_v2_chr16_+_22009471_22009543	0.464007	Rorc_Nr1d1	ENSMUST00000023561.7|Senp2|ENSMUSG00000022855.8|SUMO/sentrin specific peptidase 2
mm10_v2_chr15_-_65014904_65014904	0.463116	Rorc_Nr1d1	ENSMUST00000110100.2|Gm21961|ENSMUSG00000079024.2|predicted gene, 21961
mm10_v2_chr2_+_91710900_91710970	0.437592	Rorc_Nr1d1	ENSMUST00000142692.1|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1 	ENSMUST00000090608.5|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1
mm10_v2_chr7_+_46033698_46033823	0.422993	Rorc_Nr1d1	ENSMUST00000033121.6|Nomo1|ENSMUSG00000030835.6|nodal modulator 1
mm10_v2_chr7_-_142661858_142661880	0.396856	Rorc_Nr1d1	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr17_+_33638056_33638110	0.387256	Rorc_Nr1d1	ENSMUST00000052079.7|Pram1|ENSMUSG00000032739.10|PML-RAR alpha-regulated adaptor molecule 1
mm10_v2_chr3_-_107931817_107931885	0.384925	Rorc_Nr1d1	ENSMUST00000004137.4|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chr4_+_3940747_3940854	0.355526	Rorc_Nr1d1	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr11_+_3650253_3650253	0.345765	Rorc_Nr1d1	ENSMUST00000096441.3|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chr6_-_124712131_124712178	0.344359	Rorc_Nr1d1	ENSMUST00000004379.5|Emg1|ENSMUSG00000004268.5|EMG1 nucleolar protein homolog (S. cerevisiae)
mm10_v2_chr11_+_95712673_95712673	0.321	Rorc_Nr1d1	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr15_+_58415456_58415512	0.320833	Rorc_Nr1d1	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr15_+_89253035_89253035	0.320603	Rorc_Nr1d1	ENSMUST00000088788.3|Ppp6r2|ENSMUSG00000036561.7|protein phosphatase 6, regulatory subunit 2
mm10_v2_chr17_+_24896488_24896530	0.31995	Rorc_Nr1d1	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr1_-_191907527_191907527	0.317038	Rorc_Nr1d1	ENSMUST00000069573.5|1700034H15Rik|ENSMUSG00000055833.8|RIKEN cDNA 1700034H15 gene
mm10_v2_chr11_-_98329641_98329654	0.307423	Rorc_Nr1d1	ENSMUST00000041685.6|Neurod2|ENSMUSG00000038255.6|neurogenic differentiation 2
mm10_v2_chr5_-_123141067_123141094	0.306813	Rorc_Nr1d1	ENSMUST00000162697.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000160321.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000159637.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr2_-_91710519_91710582	0.29849	Rorc_Nr1d1	ENSMUST00000028678.8|Atg13|ENSMUSG00000027244.8|autophagy related 13 	ENSMUST00000076803.5|Atg13|ENSMUSG00000027244.8|autophagy related 13
mm10_v2_chr6_-_97205549_97205642	0.285215	Rorc_Nr1d1	ENSMUST00000164744.1|Uba3|ENSMUSG00000030061.10|ubiquitin-like modifier activating enzyme 3 	ENSMUST00000089287.5|Uba3|ENSMUSG00000030061.10|ubiquitin-like modifier activating enzyme 3
mm10_v2_chr11_+_68901538_68901635	0.284657	Rorc_Nr1d1	ENSMUST00000073471.6|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000101014.2|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000128952.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000167436.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26
mm10_v2_chr3_-_103809278_103809444	0.272085	Rorc_Nr1d1	ENSMUST00000063502.6|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106832.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106834.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000029435.8|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)
mm10_v2_chr15_-_10485385_10485422	0.258168	Rorc_Nr1d1	ENSMUST00000168690.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chr7_-_126625676_126625676	0.257868	Rorc_Nr1d1	ENSMUST00000032961.3|Nupr1|ENSMUSG00000030717.3|nuclear protein transcription regulator 1
mm10_v2_chr11_+_114890041_114890041	0.250063	Rorc_Nr1d1	ENSMUST00000106582.2|Cd300a|ENSMUSG00000034652.6|CD300A antigen 	ENSMUST00000045151.5|Cd300a|ENSMUSG00000034652.6|CD300A antigen
mm10_v2_chr9_+_77754526_77754541	0.237712	Rorc_Nr1d1	ENSMUST00000034905.8|Gclc|ENSMUSG00000032350.8|glutamate-cysteine ligase, catalytic subunit
mm10_v2_chr9_-_54647199_54647346	0.233841	Rorc_Nr1d1	ENSMUST00000128163.1|Acsbg1|ENSMUSG00000032281.5|acyl-CoA synthetase bubblegum family member 1
mm10_v2_chr3_-_107931579_107931742	0.231335	Rorc_Nr1d1	ENSMUST00000133947.2|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000124215.1|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000106688.1|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7 	ENSMUST00000106687.2|Gstm7|ENSMUSG00000004035.6|glutathione S-transferase, mu 7
mm10_v2_chr1_+_151344472_151344530	0.225171	Rorc_Nr1d1	ENSMUST00000023918.6|Ivns1abp|ENSMUSG00000023150.8|influenza virus NS1A binding protein 	ENSMUST00000097543.1|Ivns1abp|ENSMUSG00000023150.8|influenza virus NS1A binding protein 	ENSMUST00000111887.3|Ivns1abp|ENSMUSG00000023150.8|influenza virus NS1A binding protein
mm10_v2_chr4_-_55532453_55532485	0.22273	Rorc_Nr1d1	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chr14_+_118787894_118787942	0.222066	Rorc_Nr1d1	ENSMUST00000047761.6|Cldn10|ENSMUSG00000022132.9|claudin 10 	ENSMUST00000071546.7|Cldn10|ENSMUSG00000022132.9|claudin 10
mm10_v2_chr17_-_45686214_45686265	0.215614	Rorc_Nr1d1	ENSMUST00000113523.2|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr17_-_45686899_45686923	0.213098	Rorc_Nr1d1	ENSMUST00000156254.1|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr17_-_34628005_34628039	0.211514	Rorc_Nr1d1	ENSMUST00000166040.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr1_+_160195215_160195303	0.194273	Rorc_Nr1d1	ENSMUST00000135680.1|Mrps14|ENSMUSG00000058267.7|mitochondrial ribosomal protein S14 	ENSMUST00000097193.2|Mrps14|ENSMUSG00000058267.7|mitochondrial ribosomal protein S14
mm10_v2_chr9_+_65460926_65460983	0.183707	Rorc_Nr1d1	ENSMUST00000034955.6|Spg21|ENSMUSG00000032388.6|spastic paraplegia 21 homolog (human)
mm10_v2_chr12_-_24493656_24493656	0.170478	Rorc_Nr1d1	ENSMUST00000073088.2|Gm16372|ENSMUSG00000057160.2|predicted pseudogene 16372
mm10_v2_chr3_-_153944425_153944452	0.167941	Rorc_Nr1d1	ENSMUST00000150070.1|Acadm|ENSMUSG00000062908.6|acyl-Coenzyme A dehydrogenase, medium chain
mm10_v2_chr7_-_126585775_126585840	0.166172	Rorc_Nr1d1	ENSMUST00000084589.4|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm10_v2_chr11_+_116198853_116198903	0.141548	Rorc_Nr1d1	ENSMUST00000021130.6|Ten1|ENSMUSG00000020778.6|TEN1 telomerase capping complex subunit
mm10_v2_chrX_-_102252154_102252181	0.139372	Rorc_Nr1d1	ENSMUST00000050551.3|Cited1|ENSMUSG00000051159.10|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
mm10_v2_chr17_+_37046555_37046600	0.126645	Rorc_Nr1d1	ENSMUST00000172789.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr11_-_59290746_59290758	0.117646	Rorc_Nr1d1	ENSMUST00000010044.7|Wnt3a|ENSMUSG00000009900.7|wingless-related MMTV integration site 3A
mm10_v2_chr1_+_86703788_86703843	0.112852	Rorc_Nr1d1	ENSMUST00000168237.1|Dis3l2|ENSMUSG00000053333.9|DIS3 mitotic control homolog (S. cerevisiae)-like 2 	ENSMUST00000065694.6|Dis3l2|ENSMUSG00000053333.9|DIS3 mitotic control homolog (S. cerevisiae)-like 2
mm10_v2_chr1_-_172590463_172590568	0.112796	Rorc_Nr1d1	ENSMUST00000065679.6|Slamf8|ENSMUSG00000053318.6|SLAM family member 8
mm10_v2_chr6_-_30896735_30896794	0.103396	Rorc_Nr1d1	ENSMUST00000048774.6|Copg2|ENSMUSG00000025607.9|coatomer protein complex, subunit gamma 2 	ENSMUST00000166192.1|Copg2|ENSMUSG00000025607.9|coatomer protein complex, subunit gamma 2 	ENSMUST00000135230.1|Copg2|ENSMUSG00000025607.9|coatomer protein complex, subunit gamma 2
mm10_v2_chr7_+_13398115_13398132	0.0995275	Rorc_Nr1d1	ENSMUST00000005791.7|Cabp5|ENSMUSG00000005649.11|calcium binding protein 5
mm10_v2_chr14_-_54864055_54864158	0.0963367	Rorc_Nr1d1	ENSMUST00000142283.2|Homez|ENSMUSG00000057156.9|homeodomain leucine zipper-encoding gene
mm10_v2_chr2_+_4389614_4389639	0.0952257	Rorc_Nr1d1	ENSMUST00000115037.2|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr3_+_55140033_55140055	0.0837927	Rorc_Nr1d1	ENSMUST00000118963.2|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169 	ENSMUST00000061099.7|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169 	ENSMUST00000153009.1|Ccdc169|ENSMUSG00000048655.11|coiled-coil domain containing 169
mm10_v2_chr3_+_90603767_90603771	0.0573621	Rorc_Nr1d1	ENSMUST00000001046.5|S100a4|ENSMUSG00000001020.7|S100 calcium binding protein A4 	ENSMUST00000107330.1|S100a4|ENSMUSG00000001020.7|S100 calcium binding protein A4
mm10_v2_chr11_+_87581041_87581067	0.0409501	Rorc_Nr1d1	ENSMUST00000018544.5|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000063156.4|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000107960.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr15_-_10485890_10485951	0.0389349	Rorc_Nr1d1	ENSMUST00000169050.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) 	ENSMUST00000022855.5|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chr5_-_65335564_65335592	0.0332826	Rorc_Nr1d1	ENSMUST00000172780.1|Rfc1|ENSMUSG00000029191.10|replication factor C (activator 1) 1
mm10_v2_chr16_-_21995478_21995542	0.031619	Rorc_Nr1d1	ENSMUST00000074230.4|Liph|ENSMUSG00000044626.6|lipase, member H 	ENSMUST00000060673.6|Liph|ENSMUSG00000044626.6|lipase, member H
mm10_v2_chr9_+_54863742_54863801	0.024209	Rorc_Nr1d1	ENSMUST00000034843.7|Ireb2|ENSMUSG00000032293.7|iron responsive element binding protein 2
mm10_v2_chr6_-_42520325_42520325	0.0167074	Rorc_Nr1d1	ENSMUST00000104977.2|Gm4877|ENSMUSG00000078177.2|predicted gene 4877
mm10_v2_chr7_-_45211877_45211887	0.0157349	Rorc_Nr1d1	ENSMUST00000033057.7|Dkkl1|ENSMUSG00000030792.7|dickkopf-like 1
mm10_v2_chr3_+_53463666_53463681	0.0135471	Rorc_Nr1d1	ENSMUST00000058577.4|Proser1|ENSMUSG00000049504.11|proline and serine rich 1
mm10_v2_chr15_+_81872309_81872309	0.00886742	Rorc_Nr1d1	ENSMUST00000023116.6|Aco2|ENSMUSG00000022477.6|aconitase 2, mitochondrial
mm10_v2_chr17_-_24886304_24886353	0.00731958	Rorc_Nr1d1	ENSMUST00000044252.5|Nubp2|ENSMUSG00000039183.5|nucleotide binding protein 2
mm10_v2_chr6_+_134830145_134830179	0.00653328	Rorc_Nr1d1	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr11_+_70030023_70030083	0.00592784	Rorc_Nr1d1	ENSMUST00000143920.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr1_+_171895664_171895664	0.00259384	Rorc_Nr1d1	ENSMUST00000097466.2|Gm10521|ENSMUSG00000073492.2|predicted gene 10521
