mm10_v2_chr6_-_23248264_23248390	2.72682	Six6	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr3_+_88207308_88207328	1.90158	Six6	ENSMUST00000180582.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr4_-_97584605_97584610	1.73208	Six6	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr14_+_67234620_67234645	1.7119	Six6	ENSMUST00000176029.1|Ebf2|ENSMUSG00000022053.7|early B cell factor 2
mm10_v2_chr4_-_97584612_97584643	1.69074	Six6	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr17_+_43568269_43568303	1.65761	Six6	ENSMUST00000024706.5|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr4_-_43653542_43653557	1.581	Six6	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr17_+_43568641_43568676	1.52326	Six6	ENSMUST00000169694.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr2_+_131491764_131491943	1.45716	Six6	ENSMUST00000028806.5|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110179.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110189.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110182.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110183.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110186.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110188.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr5_+_140607334_140607352	1.39816	Six6	ENSMUST00000031555.1|Lfng|ENSMUSG00000029570.1|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm10_v2_chr13_-_66852017_66852017	1.38492	Six6	ENSMUST00000059329.6|Gm17449|ENSMUSG00000094740.1|predicted gene, 17449
mm10_v2_chr4_-_43653560_43653594	1.38128	Six6	ENSMUST00000107870.2|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chr4_+_156013835_156013849	1.32797	Six6	ENSMUST00000030952.5|Tnfrsf4|ENSMUSG00000029075.6|tumor necrosis factor receptor superfamily, member 4
mm10_v2_chr17_+_43568096_43568137	1.28035	Six6	ENSMUST00000167214.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr1_-_118982551_118982606	1.24395	Six6	ENSMUST00000159678.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr15_+_55557575_55557604	1.17863	Six6	ENSMUST00000170046.1|Mtbp|ENSMUSG00000022369.7|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm10_v2_chrX_-_142966709_142966734	1.1716	Six6	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr7_+_82611777_82611777	1.12798	Six6	ENSMUST00000172784.1|Adamtsl3|ENSMUSG00000070469.5|ADAMTS-like 3
mm10_v2_chr19_+_4154606_4154629	1.11545	Six6	ENSMUST00000061086.8|Ptprcap|ENSMUSG00000045826.8|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
mm10_v2_chr1_+_139454747_139454825	1.11184	Six6	ENSMUST00000053364.8|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila) 	ENSMUST00000097554.3|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila)
mm10_v2_chr17_+_43568475_43568493	1.11026	Six6	ENSMUST00000167418.1|Pla2g7|ENSMUSG00000023913.11|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm10_v2_chr16_+_84774123_84774174	1.10319	Six6	ENSMUST00000114195.1|Jam2|ENSMUSG00000053062.9|junction adhesion molecule 2
mm10_v2_chr15_-_75894474_75894529	1.05445	Six6	ENSMUST00000023237.6|Naprt1|ENSMUSG00000022574.6|nicotinate phosphoribosyltransferase domain containing 1
mm10_v2_chr9_+_98422961_98422961	1.05352	Six6	ENSMUST00000052068.9|Rbp1|ENSMUSG00000046402.9|retinol binding protein 1, cellular
mm10_v2_chr15_+_55557399_55557436	1.02783	Six6	ENSMUST00000022998.7|Mtbp|ENSMUSG00000022369.7|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm10_v2_chr11_-_106272927_106273006	0.981104	Six6	ENSMUST00000021052.9|Smarcd2|ENSMUSG00000078619.4|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm10_v2_chr15_-_82244716_82244755	0.932902	Six6	ENSMUST00000089155.4|Cenpm|ENSMUSG00000068101.4|centromere protein M 	ENSMUST00000089157.3|Cenpm|ENSMUSG00000068101.4|centromere protein M
mm10_v2_chr15_+_79895017_79895036	0.908539	Six6	ENSMUST00000023054.7|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm10_v2_chr18_+_56432116_56432163	0.89108	Six6	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr19_-_5729618_5729700	0.889205	Six6	ENSMUST00000116558.2|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000099955.3|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B 	ENSMUST00000161368.1|Fam89b|ENSMUSG00000024939.6|family with sequence similarity 89, member B
mm10_v2_chr8_+_85026833_85026899	0.872158	Six6	ENSMUST00000047281.8|2310036O22Rik|ENSMUSG00000041203.8|RIKEN cDNA 2310036O22 gene
mm10_v2_chr1_-_165708088_165708099	0.85517	Six6	ENSMUST00000040357.8|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1 	ENSMUST00000097474.3|Rcsd1|ENSMUSG00000040723.8|RCSD domain containing 1
mm10_v2_chrX_+_103414461_103414481	0.850438	Six6	ENSMUST00000033691.4|Tsx|ENSMUSG00000031329.4|testis specific X-linked gene
mm10_v2_chr18_-_88927447_88927481	0.83851	Six6	ENSMUST00000147313.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr3_-_85887472_85887516	0.837024	Six6	ENSMUST00000154148.1|Arfip1|ENSMUSG00000074513.3|ADP-ribosylation factor interacting protein 1 	ENSMUST00000033643.5|Glt28d2|ENSMUSG00000031286.5|glycosyltransferase 28 domain containing 2
mm10_v2_chr10_-_128180265_128180307	0.822351	Six6	ENSMUST00000099139.1|Rbms2|ENSMUSG00000040043.9|RNA binding motif, single stranded interacting protein 2
mm10_v2_chr5_+_144244432_144244457	0.776784	Six6	ENSMUST00000110695.1|Bri3|ENSMUSG00000047843.10|brain protein I3
mm10_v2_chr7_-_42578588_42578588	0.775147	Six6	ENSMUST00000179470.1|Gm21028|ENSMUSG00000094462.1|predicted gene, 21028
mm10_v2_chr11_+_78324200_78324236	0.750163	Six6	ENSMUST00000102478.3|Aldoc|ENSMUSG00000017390.9|aldolase C, fructose-bisphosphate
mm10_v2_chr7_-_130547358_130547386	0.734697	Six6	ENSMUST00000160289.1|Nsmce4a|ENSMUSG00000040331.9|non-SMC element 4 homolog A (S. cerevisiae)
mm10_v2_chr8_+_69832633_69832712	0.724261	Six6	ENSMUST00000131637.2|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4 	ENSMUST00000081503.6|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4
mm10_v2_chr3_-_37724321_37724490	0.705999	Six6	ENSMUST00000108105.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000079755.4|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000099128.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148
mm10_v2_chr10_+_24595623_24595780	0.689678	Six6	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr8_+_84831522_84831522	0.673871	Six6	ENSMUST00000036734.5|Gadd45gip1|ENSMUSG00000033751.5|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm10_v2_chr17_-_27909206_27909264	0.669427	Six6	ENSMUST00000114848.1|Taf11|ENSMUSG00000024218.6|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr7_-_126676357_126676383	0.645349	Six6	ENSMUST00000106371.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000106372.3|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000155419.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr17_-_62606679_62606707	0.644046	Six6	ENSMUST00000163332.1|Efna5|ENSMUSG00000090425.1|ephrin A5
mm10_v2_chr12_+_84773262_84773319	0.633891	Six6	ENSMUST00000021667.5|Isca2|ENSMUSG00000021241.6|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)
mm10_v2_chr9_-_114564315_114564369	0.62812	Six6	ENSMUST00000111816.2|Trim71|ENSMUSG00000079259.2|tripartite motif-containing 71
mm10_v2_chr7_-_141168671_141168936	0.622676	Six6	ENSMUST00000106033.3|Rnh1|ENSMUSG00000038650.8|ribonuclease/angiogenin inhibitor 1
mm10_v2_chr2_-_127482499_127482577	0.60706	Six6	ENSMUST00000088538.5|Kcnip3|ENSMUSG00000079056.6|Kv channel interacting protein 3, calsenilin
mm10_v2_chr5_+_122210134_122210295	0.606072	Six6	ENSMUST00000100747.2|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1
mm10_v2_chr8_+_61487715_61487751	0.591661	Six6	ENSMUST00000034058.6|Cbr4|ENSMUSG00000031641.7|carbonyl reductase 4 	ENSMUST00000126575.1|Cbr4|ENSMUSG00000031641.7|carbonyl reductase 4
mm10_v2_chr17_-_23771543_23771595	0.579513	Six6	ENSMUST00000086325.5|Flywch1|ENSMUSG00000040097.9|FLYWCH-type zinc finger 1
mm10_v2_chr18_+_12599894_12599926	0.572148	Six6	ENSMUST00000169401.1|Ttc39c|ENSMUSG00000024424.8|tetratricopeptide repeat domain 39C
mm10_v2_chr13_+_65512678_65512678	0.569626	Six6	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr1_+_97770158_97770209	0.565469	Six6	ENSMUST00000112844.3|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000112842.1|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000027571.6|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1
mm10_v2_chr7_-_101903783_101903786	0.552069	Six6	ENSMUST00000106969.1|Tomt|ENSMUSG00000078630.1|transmembrane O-methyltransferase
mm10_v2_chr1_-_165634451_165634576	0.54624	Six6	ENSMUST00000111435.2|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1 	ENSMUST00000068705.7|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1
mm10_v2_chr11_+_100319880_100319905	0.534523	Six6	ENSMUST00000049385.7|Eif1|ENSMUSG00000035530.7|eukaryotic translation initiation factor 1
mm10_v2_chr12_+_52097737_52097775	0.527033	Six6	ENSMUST00000040090.9|Nubpl|ENSMUSG00000035142.12|nucleotide binding protein-like
mm10_v2_chr7_+_127800844_127800941	0.526782	Six6	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr11_+_98412461_98412566	0.522823	Six6	ENSMUST00000058295.5|Erbb2|ENSMUSG00000062312.5|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm10_v2_chr16_+_10835046_10835084	0.506531	Six6	ENSMUST00000037913.8|Rmi2|ENSMUSG00000037991.9|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)
mm10_v2_chr7_-_126676428_126676439	0.497733	Six6	ENSMUST00000106373.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chrX_-_7947848_7947889	0.482695	Six6	ENSMUST00000115642.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6 	ENSMUST00000033501.8|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6 	ENSMUST00000145675.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr9_-_50528641_50528698	0.477963	Six6	ENSMUST00000034570.5|Pts|ENSMUSG00000032067.5|6-pyruvoyl-tetrahydropterin synthase
mm10_v2_chr16_-_45724600_45724619	0.47322	Six6	ENSMUST00000096057.4|Tagln3|ENSMUSG00000022658.10|transgelin 3
mm10_v2_chr1_-_128359610_128359698	0.470992	Six6	ENSMUST00000027601.4|Mcm6|ENSMUSG00000026355.5|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
mm10_v2_chr14_+_58893465_58893506	0.462244	Six6	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr10_+_128238034_128238069	0.454525	Six6	ENSMUST00000105245.2|Timeless|ENSMUSG00000039994.9|timeless circadian clock 1
mm10_v2_chr17_+_40811089_40811133	0.443096	Six6	ENSMUST00000024721.7|Rhag|ENSMUSG00000023926.7|Rhesus blood group-associated A glycoprotein
mm10_v2_chr9_-_119341390_119341420	0.42937	Six6	ENSMUST00000139870.1|Myd88|ENSMUSG00000032508.8|myeloid differentiation primary response gene 88
mm10_v2_chr19_-_53589067_53589067	0.428314	Six6	ENSMUST00000095978.3|Nutf2-ps1|ENSMUSG00000071497.3|nuclear transport factor 2, pseudogene 1
mm10_v2_chr5_-_31154152_31154253	0.424233	Six6	ENSMUST00000114632.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000114631.2|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000067186.6|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000137165.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000131391.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000141823.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein 	ENSMUST00000154241.1|Mpv17|ENSMUSG00000090262.1|MpV17 mitochondrial inner membrane protein
mm10_v2_chr19_-_23075853_23075904	0.421667	Six6	ENSMUST00000181623.1|C330002G04Rik|ENSMUSG00000097930.1|RIKEN cDNA C330002G04 gene
mm10_v2_chr10_+_73821857_73821883	0.417497	Six6	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr3_-_85722474_85722474	0.398967	Six6	ENSMUST00000119077.1|Fam160a1|ENSMUSG00000051000.11|family with sequence similarity 160, member A1
mm10_v2_chr11_-_99230998_99231019	0.39679	Six6	ENSMUST00000103133.3|Smarce1|ENSMUSG00000037935.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm10_v2_chr13_-_66227573_66227573	0.391382	Six6	ENSMUST00000167981.2|Gm10772|ENSMUSG00000091347.2|predicted gene 10772
mm10_v2_chr17_-_53539411_53539459	0.37975	Six6	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr5_-_88527841_88527891	0.379704	Six6	ENSMUST00000087033.3|Igj|ENSMUSG00000067149.3|immunoglobulin joining chain
mm10_v2_chr1_+_171419027_171419052	0.378856	Six6	ENSMUST00000171362.1|Tstd1|ENSMUSG00000091166.1|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1
mm10_v2_chr1_+_74713551_74713574	0.374063	Six6	ENSMUST00000027356.5|Cyp27a1|ENSMUSG00000026170.5|cytochrome P450, family 27, subfamily a, polypeptide 1
mm10_v2_chr7_+_27591513_27591562	0.356227	Six6	ENSMUST00000108344.2|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr11_+_58104229_58104366	0.352434	Six6	ENSMUST00000108843.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8 	ENSMUST00000134896.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8
mm10_v2_chr9_+_104002546_104002776	0.351095	Six6	ENSMUST00000035167.8|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent) 	ENSMUST00000117054.1|Nphp3|ENSMUSG00000032558.12|nephronophthisis 3 (adolescent)
mm10_v2_chr2_-_13271419_13271437	0.344869	Six6	ENSMUST00000028059.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr14_+_29978337_29978418	0.341577	Six6	ENSMUST00000016115.4|Actr8|ENSMUSG00000015971.4|ARP8 actin-related protein 8
mm10_v2_chr5_-_106926245_106926321	0.331698	Six6	ENSMUST00000117588.1|Hfm1|ENSMUSG00000043410.10|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
mm10_v2_chr2_-_13271268_13271348	0.321728	Six6	ENSMUST00000137670.1|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1 	ENSMUST00000114791.2|Rsu1|ENSMUSG00000026727.4|Ras suppressor protein 1
mm10_v2_chr5_-_129879038_129879094	0.32128	Six6	ENSMUST00000026617.6|Phkg1|ENSMUSG00000025537.6|phosphorylase kinase gamma 1
mm10_v2_chr12_+_83987854_83987898	0.32045	Six6	ENSMUST00000021649.7|Acot2|ENSMUSG00000021226.7|acyl-CoA thioesterase 2
mm10_v2_chr19_-_4625612_4625658	0.317858	Six6	ENSMUST00000025823.3|Rce1|ENSMUSG00000024889.3|RCE1 homolog, prenyl protein peptidase (S. cerevisiae)
mm10_v2_chr11_-_87826023_87826113	0.30738	Six6	ENSMUST00000103177.3|Lpo|ENSMUSG00000009356.6|lactoperoxidase
mm10_v2_chr15_+_98571004_98571026	0.306835	Six6	ENSMUST00000023728.6|4930415O20Rik|ENSMUSG00000022993.6|RIKEN cDNA 4930415O20 gene
mm10_v2_chr8_-_4275886_4275915	0.306581	Six6	ENSMUST00000003029.7|Timm44|ENSMUSG00000002949.8|translocase of inner mitochondrial membrane 44
mm10_v2_chr3_+_124321031_124321113	0.297188	Six6	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chrX_+_169685191_169685250	0.29714	Six6	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr6_-_115675871_115675964	0.296366	Six6	ENSMUST00000112949.1|Raf1|ENSMUSG00000000441.11|v-raf-leukemia viral oncogene 1
mm10_v2_chr3_+_130068390_130068412	0.293089	Six6	ENSMUST00000076703.6|Gm9396|ENSMUSG00000063328.6|predicted gene 9396
mm10_v2_chrM_+_2743_2761	0.29033	Six6	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr11_+_58104138_58104191	0.287534	Six6	ENSMUST00000020822.5|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8
mm10_v2_chr5_+_117319258_117319284	0.284221	Six6	ENSMUST00000111967.1|Vsig10|ENSMUSG00000066894.8|V-set and immunoglobulin domain containing 10
mm10_v2_chr9_+_72958785_72958850	0.26935	Six6	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chr11_+_115564434_115564490	0.258699	Six6	ENSMUST00000021085.4|Nup85|ENSMUSG00000020739.5|nucleoporin 85
mm10_v2_chr4_+_11758147_11758220	0.257353	Six6	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr13_-_66851513_66851513	0.253026	Six6	ENSMUST00000169322.1|Gm17404|ENSMUSG00000095206.1|predicted gene, 17404
mm10_v2_chr2_-_180824596_180824630	0.251564	Six6	ENSMUST00000148700.1|Gm14340|ENSMUSG00000074507.6|predicted gene 14340
mm10_v2_chr19_+_8764934_8765034	0.238766	Six6	ENSMUST00000184663.1|Nxf1|ENSMUSG00000010097.7|nuclear RNA export factor 1
mm10_v2_chr9_-_70503718_70503805	0.230743	Six6	ENSMUST00000034739.5|Rnf111|ENSMUSG00000032217.6|ring finger 111
mm10_v2_chr7_-_104315455_104315463	0.230443	Six6	ENSMUST00000106837.1|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A 	ENSMUST00000106839.2|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A 	ENSMUST00000070943.6|Trim12a|ENSMUSG00000066258.7|tripartite motif-containing 12A
mm10_v2_chr17_+_35241838_35241870	0.22794	Six6	ENSMUST00000173731.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr2_+_152293828_152293861	0.223154	Six6	ENSMUST00000028963.7|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20 	ENSMUST00000144252.1|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20
mm10_v2_chr17_-_56717681_56717709	0.221176	Six6	ENSMUST00000164907.1|Vmac|ENSMUSG00000054723.5|vimentin-type intermediate filament associated coiled-coil protein
mm10_v2_chr12_+_8921598_8921671	0.219985	Six6	ENSMUST00000020909.3|Laptm4a|ENSMUSG00000020585.4|lysosomal-associated protein transmembrane 4A
mm10_v2_chr3_+_108571699_108571699	0.215558	Six6	ENSMUST00000143054.1|Taf13|ENSMUSG00000048100.7|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr15_+_55112317_55112346	0.209405	Six6	ENSMUST00000096433.3|Deptor|ENSMUSG00000022419.9|DEP domain containing MTOR-interacting protein
mm10_v2_chr6_+_17743582_17743593	0.208698	Six6	ENSMUST00000000674.6|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000077080.2|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr8_+_105373265_105373277	0.203766	Six6	ENSMUST00000160650.1|Plekhg4|ENSMUSG00000014782.9|pleckstrin homology domain containing, family G (with RhoGef domain) member 4
mm10_v2_chr4_+_134864536_134864601	0.201237	Six6	ENSMUST00000030627.7|Rhd|ENSMUSG00000028825.7|Rh blood group, D antigen
mm10_v2_chr15_-_79742518_79742562	0.190432	Six6	ENSMUST00000089311.4|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2 	ENSMUST00000046259.7|Sun2|ENSMUSG00000042524.7|Sad1 and UNC84 domain containing 2
mm10_v2_chr17_+_57279094_57279127	0.18976	Six6	ENSMUST00000169220.2|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000005889.9|Vav1|ENSMUSG00000034116.11|vav 1 oncogene 	ENSMUST00000112870.4|Vav1|ENSMUSG00000034116.11|vav 1 oncogene
mm10_v2_chr17_+_35241746_35241778	0.184137	Six6	ENSMUST00000068056.5|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 	ENSMUST00000174757.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr6_-_8259098_8259173	0.172882	Six6	ENSMUST00000012627.4|Rpa3|ENSMUSG00000012483.4|replication protein A3
mm10_v2_chr6_+_128662379_128662396	0.172757	Six6	ENSMUST00000032518.4|Clec2h|ENSMUSG00000030364.4|C-type lectin domain family 2, member h
mm10_v2_chr7_+_30232310_30232350	0.169487	Six6	ENSMUST00000108193.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I 	ENSMUST00000108192.1|Polr2i|ENSMUSG00000019738.9|polymerase (RNA) II (DNA directed) polypeptide I
mm10_v2_chr11_-_100650693_100650749	0.167776	Six6	ENSMUST00000103119.3|Zfp385c|ENSMUSG00000014198.9|zinc finger protein 385C
mm10_v2_chr4_-_116651644_116651680	0.166203	Six6	ENSMUST00000030455.8|Akr1a1|ENSMUSG00000028692.8|aldo-keto reductase family 1, member A1 (aldehyde reductase)
mm10_v2_chr7_-_35647127_35647209	0.163791	Six6	ENSMUST00000120714.1|Pdcd5|ENSMUSG00000030417.9|programmed cell death 5
mm10_v2_chr18_+_74216118_74216145	0.163171	Six6	ENSMUST00000025444.6|Cxxc1|ENSMUSG00000024560.6|CXXC finger 1 (PHD domain)
mm10_v2_chr5_-_100373484_100373527	0.160322	Six6	ENSMUST00000182433.1|Sec31a|ENSMUSG00000035325.10|Sec31 homolog A (S. cerevisiae)
mm10_v2_chr16_-_18876655_18876767	0.159019	Six6	ENSMUST00000023391.8|Mrpl40|ENSMUSG00000022706.9|mitochondrial ribosomal protein L40
mm10_v2_chr8_+_34115030_34115030	0.158621	Six6	ENSMUST00000095345.3|Mboat4|ENSMUSG00000071113.3|membrane bound O-acyltransferase domain containing 4
mm10_v2_chr11_-_102365111_102365280	0.151775	Six6	ENSMUST00000006749.9|Slc4a1|ENSMUSG00000006574.9|solute carrier family 4 (anion exchanger), member 1
mm10_v2_chr6_+_115675983_115676004	0.151757	Six6	ENSMUST00000068960.9|D830050J10Rik|ENSMUSG00000055396.9|RIKEN cDNA D830050J10 gene
mm10_v2_chr17_+_55959146_55959187	0.148901	Six6	ENSMUST00000086869.4|Ccdc94|ENSMUSG00000003208.8|coiled-coil domain containing 94
mm10_v2_chr17_+_56717759_56717819	0.14801	Six6	ENSMUST00000002452.6|Ndufa11|ENSMUSG00000002379.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11
mm10_v2_chrY_-_6237995_6237995	0.147772	Six6	ENSMUST00000177612.1|Gm21746|ENSMUSG00000094346.1|predicted gene, 21746
mm10_v2_chr8_-_106573461_106573462	0.145108	Six6	ENSMUST00000073722.5|Gm10073|ENSMUSG00000060019.5|predicted pseudogene 10073
mm10_v2_chr10_+_80603253_80603297	0.135401	Six6	ENSMUST00000180350.1|Scamp4|ENSMUSG00000078441.4|secretory carrier membrane protein 4
mm10_v2_chr5_+_123907175_123907292	0.131042	Six6	ENSMUST00000023869.8|Denr|ENSMUSG00000023106.9|density-regulated protein
mm10_v2_chr8_-_121829480_121829571	0.129711	Six6	ENSMUST00000174717.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000174192.1|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4 	ENSMUST00000045884.10|Klhdc4|ENSMUSG00000040263.10|kelch domain containing 4
mm10_v2_chr12_+_105705970_105705987	0.1277	Six6	ENSMUST00000040876.5|Ak7|ENSMUSG00000041323.5|adenylate kinase 7
mm10_v2_chr19_-_55315980_55316038	0.122137	Six6	ENSMUST00000076891.5|Zdhhc6|ENSMUSG00000024982.9|zinc finger, DHHC domain containing 6
mm10_v2_chr13_+_100124850_100124924	0.120771	Six6	ENSMUST00000022147.8|Smn1|ENSMUSG00000021645.10|survival motor neuron 1 	ENSMUST00000091321.5|Smn1|ENSMUSG00000021645.10|survival motor neuron 1 	ENSMUST00000143937.1|Smn1|ENSMUSG00000021645.10|survival motor neuron 1
mm10_v2_chr7_+_81762925_81762943	0.107451	Six6	ENSMUST00000042166.4|Fam103a1|ENSMUSG00000038646.7|family with sequence similarity 103, member A1
mm10_v2_chrX_-_7947553_7947674	0.107396	Six6	ENSMUST00000133349.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr2_+_117249725_117249754	0.103911	Six6	ENSMUST00000028825.4|Fam98b|ENSMUSG00000027349.5|family with sequence similarity 98, member B
mm10_v2_chr16_-_31275277_31275290	0.10103	Six6	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chr3_-_158016419_158016453	0.100107	Six6	ENSMUST00000127778.1|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr9_-_121839460_121839465	0.0997897	Six6	ENSMUST00000135986.2|Ccdc13|ENSMUSG00000079235.4|coiled-coil domain containing 13
mm10_v2_chr7_+_75610038_75610080	0.0882815	Six6	ENSMUST00000125771.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr8_-_94918012_94918098	0.0801982	Six6	ENSMUST00000077955.5|Ccdc102a|ENSMUSG00000063605.5|coiled-coil domain containing 102A
mm10_v2_chr3_-_106547726_106547802	0.0724378	Six6	ENSMUST00000039153.7|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000148269.1|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1 	ENSMUST00000068301.4|Cept1|ENSMUSG00000040774.9|choline/ethanolaminephosphotransferase 1
mm10_v2_chr9_+_119341487_119341515	0.0660415	Six6	ENSMUST00000175743.1|Acaa1a|ENSMUSG00000036138.10|acetyl-Coenzyme A acyltransferase 1A 	ENSMUST00000176397.1|Acaa1a|ENSMUSG00000036138.10|acetyl-Coenzyme A acyltransferase 1A
mm10_v2_chr2_-_119029359_119029389	0.059787	Six6	ENSMUST00000110833.1|Ccdc32|ENSMUSG00000039983.7|coiled-coil domain containing 32
mm10_v2_chr12_-_113422730_113422744	0.0582374	Six6	ENSMUST00000177715.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu 	ENSMUST00000103426.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu
mm10_v2_chr7_+_110627650_110627669	0.052896	Six6	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr18_+_14424821_14424868	0.052635	Six6	ENSMUST00000069552.5|Gm5160|ENSMUSG00000055795.5|predicted gene 5160
mm10_v2_chr1_+_45311538_45311638	0.0462317	Six6	ENSMUST00000087883.6|Col3a1|ENSMUSG00000026043.12|collagen, type III, alpha 1
mm10_v2_chr15_-_76206309_76206357	0.0450112	Six6	ENSMUST00000073418.6|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000171634.1|Plec|ENSMUSG00000022565.9|plectin 	ENSMUST00000076442.5|Plec|ENSMUSG00000022565.9|plectin
mm10_v2_chr7_+_81762947_81763050	0.0401688	Six6	ENSMUST00000133034.1|Fam103a1|ENSMUSG00000038646.7|family with sequence similarity 103, member A1
mm10_v2_chr16_+_11203375_11203448	0.0369346	Six6	ENSMUST00000181526.1|2610020C07Rik|ENSMUSG00000097537.1|RIKEN cDNA 2610020C07 gene
mm10_v2_chr5_+_140419248_140419377	0.0363959	Six6	ENSMUST00000100507.3|Eif3b|ENSMUSG00000056076.9|eukaryotic translation initiation factor 3, subunit B
mm10_v2_chr19_-_11336107_11336144	0.035514	Six6	ENSMUST00000056035.2|Ms4a7|ENSMUSG00000024672.5|membrane-spanning 4-domains, subfamily A, member 7 	ENSMUST00000067532.4|Ms4a7|ENSMUSG00000024672.5|membrane-spanning 4-domains, subfamily A, member 7
mm10_v2_chr10_-_81627797_81627797	0.0341757	Six6	ENSMUST00000042923.8|Sirt6|ENSMUSG00000034748.10|sirtuin 6
mm10_v2_chr7_+_43690418_43690418	0.0310756	Six6	ENSMUST00000056329.6|Klk14|ENSMUSG00000044737.6|kallikrein related-peptidase 14
mm10_v2_chr3_-_95133989_95134017	0.0281381	Six6	ENSMUST00000172572.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1 	ENSMUST00000173462.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1
mm10_v2_chr5_+_121204477_121204499	0.0276586	Six6	ENSMUST00000031617.9|Rpl6|ENSMUSG00000029614.9|ribosomal protein L6
mm10_v2_chr13_-_90089060_90089092	0.0271905	Six6	ENSMUST00000161396.1|Xrcc4|ENSMUSG00000021615.7|X-ray repair complementing defective repair in Chinese hamster cells 4
mm10_v2_chrX_-_7947763_7947776	0.0255077	Six6	ENSMUST00000154244.1|Hdac6|ENSMUSG00000031161.9|histone deacetylase 6
mm10_v2_chr17_+_25133385_25133434	0.0223489	Six6	ENSMUST00000040729.2|Clcn7|ENSMUSG00000036636.3|chloride channel 7
mm10_v2_chr8_+_69822429_69822592	0.01614	Six6	ENSMUST00000164890.1|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2 	ENSMUST00000034325.4|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2
mm10_v2_chr2_+_69790968_69790973	0.0153623	Six6	ENSMUST00000180290.1|Phospho2|ENSMUSG00000027088.4|phosphatase, orphan 2
mm10_v2_chr17_+_17316078_17316078	0.0118692	Six6	ENSMUST00000105311.3|Gm6712|ENSMUSG00000072761.4|predicted gene 6712
mm10_v2_chr11_-_11627824_11627824	0.00978522	Six6	ENSMUST00000081896.4|4930512M02Rik|ENSMUSG00000062511.6|RIKEN cDNA 4930512M02 gene
mm10_v2_chrX_-_12673540_12673668	0.00644182	Six6	ENSMUST00000060108.6|1810030O07Rik|ENSMUSG00000044148.6|RIKEN cDNA 1810030O07 gene
mm10_v2_chr4_+_42158092_42158092	0.00308849	Six6	ENSMUST00000098122.2|Gm13306|ENSMUSG00000073877.4|predicted gene 13306
mm10_v2_chr3_+_85574109_85574148	0.00137708	Six6	ENSMUST00000127348.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107672.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae) 	ENSMUST00000107674.1|Pet112|ENSMUSG00000028085.6|PET112 homolog (S. cerevisiae)
