mm10_v2_chr5_-_53707532_53707704	4.56808	En2	ENSMUST00000031093.3|Cckar|ENSMUSG00000029193.4|cholecystokinin A receptor
mm10_v2_chr5_+_139543889_139543904	4.25728	En2	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr14_-_67715585_67715681	3.55273	En2	ENSMUST00000163100.1|Cdca2|ENSMUSG00000048922.12|cell division cycle associated 2 	ENSMUST00000132705.1|Cdca2|ENSMUSG00000048922.12|cell division cycle associated 2 	ENSMUST00000124045.1|Cdca2|ENSMUSG00000048922.12|cell division cycle associated 2
mm10_v2_chr4_+_109978004_109978053	2.62249	En2	ENSMUST00000061187.3|Dmrta2|ENSMUSG00000047143.3|doublesex and mab-3 related transcription factor like family A2
mm10_v2_chr2_+_25372315_25372368	2.36883	En2	ENSMUST00000028329.6|Sapcd2|ENSMUSG00000026955.7|suppressor APC domain containing 2 	ENSMUST00000114293.2|Sapcd2|ENSMUSG00000026955.7|suppressor APC domain containing 2 	ENSMUST00000100323.2|Sapcd2|ENSMUSG00000026955.7|suppressor APC domain containing 2
mm10_v2_chr16_+_33684538_33684554	2.3388	En2	ENSMUST00000126532.1|Heg1|ENSMUSG00000075254.5|HEG homolog 1 (zebrafish)
mm10_v2_chr5_+_33658123_33658160	2.28441	En2	ENSMUST00000074849.6|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3 	ENSMUST00000079534.4|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3
mm10_v2_chrX_-_60893430_60893440	2.27707	En2	ENSMUST00000135107.2|Sox3|ENSMUSG00000045179.8|SRY-box containing gene 3
mm10_v2_chr3_-_27153861_27153878	2.24532	En2	ENSMUST00000108300.1|Ect2|ENSMUSG00000027699.13|ect2 oncogene 	ENSMUST00000108298.2|Ect2|ENSMUSG00000027699.13|ect2 oncogene
mm10_v2_chr6_+_146888481_146888589	2.12622	En2	ENSMUST00000016631.7|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENSMUST00000111623.2|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm10_v2_chr3_-_27153844_27153855	2.1225	En2	ENSMUST00000176242.2|Ect2|ENSMUSG00000027699.13|ect2 oncogene 	ENSMUST00000176780.1|Ect2|ENSMUSG00000027699.13|ect2 oncogene
mm10_v2_chr9_+_65890237_65890343	2.0888	En2	ENSMUST00000045802.6|2810417H13Rik|ENSMUSG00000040204.6|RIKEN cDNA 2810417H13 gene
mm10_v2_chr6_+_8948608_8948619	1.97467	En2	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr7_+_29071597_29071613	1.8883	En2	ENSMUST00000180926.1|Gm26604|ENSMUSG00000097079.1|predicted gene, 26604
mm10_v2_chr5_+_33658567_33658616	1.80098	En2	ENSMUST00000114426.3|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3
mm10_v2_chr4_+_62583568_62583601	1.78572	En2	ENSMUST00000098031.3|Rgs3|ENSMUSG00000059810.12|regulator of G-protein signaling 3
mm10_v2_chrM_+_11734_11757	1.71098	En2	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr10_+_73821857_73821883	1.68473	En2	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chrX_+_56454871_56454887	1.62234	En2	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chrM_+_10167_10167	1.61888	En2	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr8_+_83955507_83955507	1.61848	En2	ENSMUST00000005607.8|Asf1b|ENSMUSG00000005470.8|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)
mm10_v2_chr18_+_82914632_82914664	1.61626	En2	ENSMUST00000071233.6|Zfp516|ENSMUSG00000058881.6|zinc finger protein 516
mm10_v2_chr10_+_26772477_26772515	1.56556	En2	ENSMUST00000039557.7|Arhgap18|ENSMUSG00000039031.9|Rho GTPase activating protein 18
mm10_v2_chr12_+_72441852_72441866	1.55906	En2	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr18_+_34625009_34625033	1.54413	En2	ENSMUST00000166044.1|Kif20a|ENSMUSG00000003779.9|kinesin family member 20A
mm10_v2_chr14_+_67716095_67716151	1.54348	En2	ENSMUST00000078053.6|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9 	ENSMUST00000145542.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9 	ENSMUST00000125212.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9
mm10_v2_chr6_+_4755327_4755357	1.5252	En2	ENSMUST00000176551.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10
mm10_v2_chr13_-_114458720_114458736	1.49736	En2	ENSMUST00000022287.5|Fst|ENSMUSG00000021765.7|follistatin
mm10_v2_chrM_+_9870_9885	1.48792	En2	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chrX_+_134308084_134308209	1.44613	En2	ENSMUST00000081064.5|Cenpi|ENSMUSG00000031262.6|centromere protein I 	ENSMUST00000101251.1|Cenpi|ENSMUSG00000031262.6|centromere protein I 	ENSMUST00000129782.1|Cenpi|ENSMUSG00000031262.6|centromere protein I
mm10_v2_chr2_+_20737306_20737321	1.42182	En2	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr5_+_33658550_33658563	1.41233	En2	ENSMUST00000152847.1|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3
mm10_v2_chr2_-_72986716_72986716	1.4059	En2	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr12_+_72441933_72441970	1.35918	En2	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr9_-_66514567_66514597	1.35504	En2	ENSMUST00000056890.8|Fbxl22|ENSMUSG00000050503.8|F-box and leucine-rich repeat protein 22
mm10_v2_chr18_+_34624621_34624629	1.33232	En2	ENSMUST00000167161.1|Kif20a|ENSMUSG00000003779.9|kinesin family member 20A
mm10_v2_chr8_-_45382198_45382291	1.22374	En2	ENSMUST00000093526.6|Fam149a|ENSMUSG00000070044.9|family with sequence similarity 149, member A
mm10_v2_chrM_+_7005_7022	1.19477	En2	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr17_-_35697971_35698001	1.171	En2	ENSMUST00000146472.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr13_-_47106176_47106206	1.16905	En2	ENSMUST00000021807.6|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding) 	ENSMUST00000135278.1|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding)
mm10_v2_chr11_-_86993682_86993707	1.15285	En2	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chrM_+_7759_7927	1.151	En2	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chrM_+_3906_3926	1.12845	En2	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chrX_+_129749740_129749822	1.111	En2	ENSMUST00000167619.2|Diap2|ENSMUSG00000034480.12|diaphanous homolog 2 (Drosophila) 	ENSMUST00000037854.8|Diap2|ENSMUSG00000034480.12|diaphanous homolog 2 (Drosophila)
mm10_v2_chr3_+_76075583_76075583	1.08027	En2	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr12_+_109545390_109545443	1.05311	En2	ENSMUST00000146701.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr18_-_61707583_61707658	1.03346	En2	ENSMUST00000025472.1|Pcyox1l|ENSMUSG00000024579.2|prenylcysteine oxidase 1 like
mm10_v2_chr14_+_67716262_67716359	1.02434	En2	ENSMUST00000150768.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9
mm10_v2_chr12_+_38780284_38780349	1.01978	En2	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr9_+_45138437_45138462	0.984407	En2	ENSMUST00000060125.5|Scn4b|ENSMUSG00000046480.5|sodium channel, type IV, beta
mm10_v2_chr12_+_52699297_52699411	0.960203	En2	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr12_+_38780817_38780854	0.956769	En2	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr3_+_88207308_88207328	0.941641	En2	ENSMUST00000180582.1|Gm3764|ENSMUSG00000097156.1|predicted gene 3764
mm10_v2_chr6_-_71632897_71632947	0.926414	En2	ENSMUST00000065509.4|Kdm3a|ENSMUSG00000053470.7|lysine (K)-specific demethylase 3A
mm10_v2_chr17_+_34039437_34039481	0.900793	En2	ENSMUST00000131134.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000087497.4|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114255.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114252.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2
mm10_v2_chr7_+_27486910_27486960	0.86644	En2	ENSMUST00000008528.7|Sertad1|ENSMUSG00000008384.8|SERTA domain containing 1
mm10_v2_chr12_-_91779129_91779144	0.838011	En2	ENSMUST00000170077.1|Ston2|ENSMUSG00000020961.8|stonin 2
mm10_v2_chr18_-_88927447_88927481	0.836848	En2	ENSMUST00000147313.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr1_+_131527901_131527911	0.807455	En2	ENSMUST00000068613.4|Fam72a|ENSMUSG00000055184.4|family with sequence similarity 72, member A
mm10_v2_chr6_-_71632651_71632694	0.79727	En2	ENSMUST00000167220.1|Kdm3a|ENSMUSG00000053470.7|lysine (K)-specific demethylase 3A
mm10_v2_chr17_+_35424842_35424856	0.792783	En2	ENSMUST00000174699.1|H2-Q6|ENSMUSG00000073409.6|histocompatibility 2, Q region locus 6
mm10_v2_chr17_+_35424870_35424885	0.791913	En2	ENSMUST00000113879.3|H2-Q6|ENSMUSG00000073409.6|histocompatibility 2, Q region locus 6
mm10_v2_chr3_+_19188099_19188110	0.759267	En2	ENSMUST00000130645.1|Mtfr1|ENSMUSG00000027601.7|mitochondrial fission regulator 1
mm10_v2_chr5_+_138187485_138187521	0.756061	En2	ENSMUST00000110934.2|Cnpy4|ENSMUSG00000036968.9|canopy 4 homolog (zebrafish)
mm10_v2_chr13_+_44121167_44121322	0.665514	En2	ENSMUST00000163056.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083 	ENSMUST00000159595.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083
mm10_v2_chr7_+_103550368_103550368	0.651193	En2	ENSMUST00000106888.1|Olfr613|ENSMUSG00000078624.2|olfactory receptor 613
mm10_v2_chr14_+_53324632_53324632	0.631311	En2	ENSMUST00000178100.1|Trav7n-6|ENSMUSG00000095415.1|T cell receptor alpha variable 7N-6
mm10_v2_chr4_-_129261394_129261406	0.611603	En2	ENSMUST00000145261.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr2_+_144527718_144527773	0.609692	En2	ENSMUST00000028914.2|Polr3f|ENSMUSG00000027427.7|polymerase (RNA) III (DNA directed) polypeptide F 	ENSMUST00000110017.2|Polr3f|ENSMUSG00000027427.7|polymerase (RNA) III (DNA directed) polypeptide F
mm10_v2_chr9_+_113930934_113930987	0.599147	En2	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr16_+_52031549_52031570	0.597318	En2	ENSMUST00000114471.1|Cblb|ENSMUSG00000022637.10|Casitas B-lineage lymphoma b
mm10_v2_chr7_+_64185459_64185601	0.594528	En2	ENSMUST00000177102.2|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107519.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000137650.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000032737.5|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107515.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000144996.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1
mm10_v2_chrX_+_136741821_136741864	0.591584	En2	ENSMUST00000089350.4|BC065397|ENSMUSG00000072960.2|cDNA sequence BC065397
mm10_v2_chr5_-_84417359_84417389	0.580278	En2	ENSMUST00000113401.1|Epha5|ENSMUSG00000029245.10|Eph receptor A5
mm10_v2_chr15_-_38300693_38300715	0.576213	En2	ENSMUST00000074043.5|Klf10|ENSMUSG00000037465.9|Kruppel-like factor 10
mm10_v2_chr8_-_84237042_84237061	0.570526	En2	ENSMUST00000039480.5|Zswim4|ENSMUSG00000035671.5|zinc finger SWIM-type containing 4
mm10_v2_chr6_-_50456085_50456174	0.543212	En2	ENSMUST00000146341.1|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3 	ENSMUST00000071728.4|Osbpl3|ENSMUSG00000029822.9|oxysterol binding protein-like 3
mm10_v2_chr15_+_102406143_102406380	0.537849	En2	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr5_-_131616599_131616611	0.532357	En2	ENSMUST00000161804.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr3_+_96268654_96268683	0.521447	En2	ENSMUST00000098843.2|Hist2h3b|ENSMUSG00000074403.2|histone cluster 2, H3b
mm10_v2_chr4_-_24430838_24430890	0.509586	En2	ENSMUST00000183964.1|RP23-35K5.2|ENSMUSG00000099150.1|RP23-35K5.2
mm10_v2_chr5_-_138187177_138187237	0.503289	En2	ENSMUST00000110937.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000139276.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000048698.7|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000123415.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr13_+_21717626_21717631	0.500487	En2	ENSMUST00000091754.2|Hist1h3h|ENSMUSG00000069312.2|histone cluster 1, H3h
mm10_v2_chr4_+_21848039_21848077	0.499413	En2	ENSMUST00000098238.2|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18 	ENSMUST00000108229.1|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18
mm10_v2_chr6_+_37870786_37870882	0.497264	En2	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr1_+_110099295_110099295	0.470661	En2	ENSMUST00000134301.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr8_-_84662841_84662859	0.460783	En2	ENSMUST00000060427.4|Ier2|ENSMUSG00000053560.4|immediate early response 2
mm10_v2_chr2_+_118861954_118862008	0.448458	En2	ENSMUST00000028807.5|Ivd|ENSMUSG00000027332.5|isovaleryl coenzyme A dehydrogenase
mm10_v2_chr7_+_101896340_101896431	0.441647	En2	ENSMUST00000035395.7|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000106973.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000144207.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr15_+_80255184_80255263	0.439219	En2	ENSMUST00000109605.3|Atf4|ENSMUSG00000042406.7|activating transcription factor 4
mm10_v2_chr17_-_34959232_34959238	0.428926	En2	ENSMUST00000165202.1|Hspa1b|ENSMUSG00000090877.2|heat shock protein 1B 	ENSMUST00000172753.1|Hspa1b|ENSMUSG00000090877.2|heat shock protein 1B
mm10_v2_chr4_+_138775735_138775784	0.428363	En2	ENSMUST00000030528.2|Pla2g2d|ENSMUSG00000041202.6|phospholipase A2, group IID
mm10_v2_chr3_+_134236483_134236500	0.42296	En2	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr19_+_6046576_6046662	0.420042	En2	ENSMUST00000138532.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000129081.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000156550.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr4_-_155056784_155056827	0.39125	En2	ENSMUST00000131173.2|Plch2|ENSMUSG00000029055.11|phospholipase C, eta 2
mm10_v2_chr2_+_71389239_71389278	0.385961	En2	ENSMUST00000028408.2|Hat1|ENSMUSG00000027018.5|histone aminotransferase 1
mm10_v2_chr17_+_45734506_45734630	0.382187	En2	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr4_+_116221633_116221661	0.379126	En2	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr7_-_4778141_4778144	0.376493	En2	ENSMUST00000094892.5|Il11|ENSMUSG00000004371.8|interleukin 11
mm10_v2_chrM_+_2743_2761	0.366031	En2	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr2_-_116067391_116067444	0.360527	En2	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr13_+_23544052_23544052	0.360324	En2	ENSMUST00000075558.2|Hist1h3f|ENSMUSG00000059309.2|histone cluster 1, H3f
mm10_v2_chr14_+_79515618_79515694	0.355972	En2	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr11_+_60537978_60538074	0.33894	En2	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr7_-_119895446_119895543	0.336815	En2	ENSMUST00000098080.2|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr1_-_75046639_75046639	0.324084	En2	ENSMUST00000152855.1|Nhej1|ENSMUSG00000026162.6|nonhomologous end-joining factor 1
mm10_v2_chr16_+_8830093_8830104	0.320844	En2	ENSMUST00000023150.5|1810013L24Rik|ENSMUSG00000022507.5|RIKEN cDNA 1810013L24 gene
mm10_v2_chrX_-_136741155_136741352	0.300038	En2	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr5_-_106696819_106696839	0.281953	En2	ENSMUST00000127434.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112696.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112698.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr17_-_34972124_34972158	0.270551	En2	ENSMUST00000087328.2|Hspa1a|ENSMUSG00000091971.2|heat shock protein 1A 	ENSMUST00000179128.1|Hspa1a|ENSMUSG00000091971.2|heat shock protein 1A
mm10_v2_chr7_-_102210120_102210157	0.270248	En2	ENSMUST00000070165.5|Nup98|ENSMUSG00000063550.7|nucleoporin 98
mm10_v2_chr9_+_104063678_104063710	0.265986	En2	ENSMUST00000047799.5|Acad11|ENSMUSG00000090150.2|acyl-Coenzyme A dehydrogenase family, member 11
mm10_v2_chr5_+_135106881_135106918	0.235326	En2	ENSMUST00000005507.3|Mlxipl|ENSMUSG00000005373.7|MLX interacting protein-like
mm10_v2_chr3_+_94413244_94413318	0.225134	En2	ENSMUST00000166032.1|Tdrkh|ENSMUSG00000041912.6|tudor and KH domain containing protein 	ENSMUST00000045245.5|Tdrkh|ENSMUSG00000041912.6|tudor and KH domain containing protein
mm10_v2_chr4_+_150853919_150854050	0.21975	En2	ENSMUST00000073600.2|Errfi1|ENSMUSG00000028967.4|ERBB receptor feedback inhibitor 1
mm10_v2_chr2_+_116067213_116067250	0.218831	En2	ENSMUST00000152412.1|G630016G05Rik|ENSMUSG00000086308.1|RIKEN cDNA G630016G05 gene
mm10_v2_chr4_+_130047840_130047901	0.217556	En2	ENSMUST00000044565.8|Col16a1|ENSMUSG00000040690.9|collagen, type XVI, alpha 1 	ENSMUST00000132251.1|Col16a1|ENSMUSG00000040690.9|collagen, type XVI, alpha 1
mm10_v2_chr9_-_109082372_109082414	0.201613	En2	ENSMUST00000167504.1|Tma7|ENSMUSG00000091537.1|translational machinery associated 7 homolog (S. cerevisiae)
mm10_v2_chr17_-_29007925_29007962	0.201164	En2	ENSMUST00000009138.5|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38 	ENSMUST00000119274.1|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38
mm10_v2_chr7_+_64501687_64501706	0.199708	En2	ENSMUST00000032732.8|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr11_-_50292302_50292363	0.193435	En2	ENSMUST00000059458.4|Maml1|ENSMUSG00000050567.10|mastermind like 1 (Drosophila)
mm10_v2_chr3_+_61364507_61364633	0.189522	En2	ENSMUST00000049064.2|Rap2b|ENSMUSG00000036894.2|RAP2B, member of RAS oncogene family
mm10_v2_chr10_+_128303322_128303352	0.183852	En2	ENSMUST00000005825.6|Pan2|ENSMUSG00000005682.8|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chrX_-_37110257_37110346	0.179827	En2	ENSMUST00000076265.6|Upf3b|ENSMUSG00000036572.10|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm10_v2_chr9_-_107635330_107635353	0.165133	En2	ENSMUST00000055704.6|Gnai2|ENSMUSG00000032562.8|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm10_v2_chr7_+_64502090_64502155	0.163792	En2	ENSMUST00000137732.1|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr16_-_45724600_45724619	0.161496	En2	ENSMUST00000096057.4|Tagln3|ENSMUSG00000022658.10|transgelin 3
mm10_v2_chr11_+_75532099_75532125	0.157391	En2	ENSMUST00000169547.2|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr19_+_25406661_25406699	0.150376	En2	ENSMUST00000146647.1|Kank1|ENSMUSG00000032702.10|KN motif and ankyrin repeat domains 1
mm10_v2_chr7_-_105399991_105400054	0.143778	En2	ENSMUST00000118726.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000074686.7|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000122327.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000179474.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000048079.6|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2
mm10_v2_chr3_+_159839729_159839745	0.135155	En2	ENSMUST00000068952.5|Wls|ENSMUSG00000028173.6|wntless homolog (Drosophila)
mm10_v2_chr15_+_100353149_100353200	0.130959	En2	ENSMUST00000075675.5|AB099516|ENSMUSG00000093789.1|cDNA sequence AB099516 	ENSMUST00000088142.5|Mettl7a2|ENSMUSG00000056487.8|methyltransferase like 7A2 	ENSMUST00000176287.1|Mettl7a2|ENSMUSG00000056487.8|methyltransferase like 7A2
mm10_v2_chr15_+_100334929_100334929	0.129624	En2	ENSMUST00000075420.4|Mettl7a3|ENSMUSG00000058057.4|methyltransferase like 7A3
mm10_v2_chr5_-_62766153_62766246	0.126454	En2	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr9_-_96719549_96719565	0.123984	En2	ENSMUST00000128269.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr4_+_116221590_116221618	0.123519	En2	ENSMUST00000147292.1|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chrX_+_102119447_102119490	0.119476	En2	ENSMUST00000113627.3|Pin4|ENSMUSG00000079480.3|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
mm10_v2_chr5_+_81021583_81021593	0.118287	En2	ENSMUST00000121707.1|Lphn3|ENSMUSG00000037605.10|latrophilin 3
mm10_v2_chr7_-_30559828_30559842	0.1061	En2	ENSMUST00000108164.1|Lin37|ENSMUSG00000036845.6|lin-37 homolog (C. elegans)
mm10_v2_chr7_+_25681158_25681158	0.0965861	En2	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr3_+_108653931_108653964	0.0938473	En2	ENSMUST00000029483.8|Clcc1|ENSMUSG00000027884.10|chloride channel CLIC-like 1 	ENSMUST00000124384.1|Clcc1|ENSMUSG00000027884.10|chloride channel CLIC-like 1
mm10_v2_chr9_+_104063376_104063415	0.0931149	En2	ENSMUST00000120854.1|Acad11|ENSMUSG00000090150.2|acyl-Coenzyme A dehydrogenase family, member 11
mm10_v2_chr14_+_32321987_32322042	0.0924935	En2	ENSMUST00000022480.7|Ogdhl|ENSMUSG00000021913.7|oxoglutarate dehydrogenase-like
mm10_v2_chr18_+_42511496_42511521	0.087142	En2	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr3_-_146682410_146682522	0.0867044	En2	ENSMUST00000124931.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13 	ENSMUST00000147113.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13
mm10_v2_chrX_+_75514299_75514316	0.0854229	En2	ENSMUST00000114070.3|Vbp1|ENSMUSG00000031197.5|von Hippel-Lindau binding protein 1 	ENSMUST00000033540.5|Vbp1|ENSMUSG00000031197.5|von Hippel-Lindau binding protein 1
mm10_v2_chr11_-_102946688_102946725	0.0843268	En2	ENSMUST00000057849.5|C1ql1|ENSMUSG00000045532.5|complement component 1, q subcomponent-like 1
mm10_v2_chr6_+_28480337_28480370	0.0830992	En2	ENSMUST00000001460.7|Snd1|ENSMUSG00000001424.8|staphylococcal nuclease and tudor domain containing 1 	ENSMUST00000167201.1|Snd1|ENSMUSG00000001424.8|staphylococcal nuclease and tudor domain containing 1
mm10_v2_chr9_+_21955747_21955769	0.0804847	En2	ENSMUST00000053583.5|Swsap1|ENSMUSG00000051238.5|SWIM type zinc finger 7 associated protein 1
mm10_v2_chr1_-_172632931_172632974	0.0774644	En2	ENSMUST00000027826.5|Dusp23|ENSMUSG00000026544.5|dual specificity phosphatase 23
mm10_v2_chr1_-_78968079_78968079	0.0730617	En2	ENSMUST00000049117.5|Gm5830|ENSMUSG00000072978.2|predicted pseudogene 5830
mm10_v2_chr3_-_94436574_94436616	0.0693332	En2	ENSMUST00000029787.4|Oaz3|ENSMUSG00000028141.4|ornithine decarboxylase antizyme 3
mm10_v2_chr7_+_88430257_88430286	0.0656758	En2	ENSMUST00000107256.2|Rab38|ENSMUSG00000030559.7|RAB38, member of RAS oncogene family
mm10_v2_chr8_+_4238733_4238767	0.0647186	En2	ENSMUST00000110998.2|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000062686.4|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr2_+_14873656_14873820	0.0614654	En2	ENSMUST00000114718.1|Cacnb2|ENSMUSG00000057914.9|calcium channel, voltage-dependent, beta 2 subunit 	ENSMUST00000114719.1|Cacnb2|ENSMUSG00000057914.9|calcium channel, voltage-dependent, beta 2 subunit
mm10_v2_chr3_-_107333289_107333289	0.0606304	En2	ENSMUST00000061772.9|Rbm15|ENSMUSG00000048109.9|RNA binding motif protein 15
mm10_v2_chr11_+_115187481_115187562	0.0586775	En2	ENSMUST00000100235.2|Tmem104|ENSMUSG00000045980.7|transmembrane protein 104 	ENSMUST00000061450.6|Tmem104|ENSMUSG00000045980.7|transmembrane protein 104
mm10_v2_chr5_-_106696530_106696650	0.0563531	En2	ENSMUST00000137285.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000124263.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112695.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000155495.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000135108.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr14_+_58070547_58070547	0.0554856	En2	ENSMUST00000165526.1|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr8_-_120228221_120228297	0.0554507	En2	ENSMUST00000183235.1|A330074K22Rik|ENSMUSG00000097960.1|RIKEN cDNA A330074K22 gene
mm10_v2_chr6_-_146502141_146502230	0.054413	En2	ENSMUST00000079573.6|Itpr2|ENSMUSG00000030287.9|inositol 1,4,5-triphosphate receptor 2 	ENSMUST00000139732.1|Itpr2|ENSMUSG00000030287.9|inositol 1,4,5-triphosphate receptor 2
mm10_v2_chr8_+_4238815_4238886	0.0479487	En2	ENSMUST00000003027.7|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000110999.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr3_-_79841729_79841729	0.0479328	En2	ENSMUST00000168038.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr3_-_116253467_116253484	0.0424623	En2	ENSMUST00000090473.5|Gpr88|ENSMUSG00000068696.5|G-protein coupled receptor 88
mm10_v2_chr19_-_56822161_56822220	0.0362098	En2	ENSMUST00000118592.1|A630007B06Rik|ENSMUSG00000035173.8|RIKEN cDNA A630007B06 gene
mm10_v2_chr4_+_150237694_150237705	0.0310683	En2	ENSMUST00000141931.1|Eno1|ENSMUSG00000063524.7|enolase 1, alpha non-neuron
mm10_v2_chr11_-_31671863_31671885	0.0287762	En2	ENSMUST00000058060.7|Bod1|ENSMUSG00000044502.10|biorientation of chromosomes in cell division 1
mm10_v2_chrM_+_9452_9468	0.0175276	En2	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm10_v2_chr14_-_37135126_37135141	0.0171157	En2	ENSMUST00000042564.9|Ghitm|ENSMUSG00000041028.9|growth hormone inducible transmembrane protein
mm10_v2_chr11_+_69095217_69095289	0.0110595	En2	ENSMUST00000101004.2|Per1|ENSMUSG00000020893.11|period circadian clock 1
mm10_v2_chr9_-_96719404_96719479	0.00137899	En2	ENSMUST00000140121.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
