mm10_v2_chr18_-_84086379_84086404	25.2081	Foxa2_Foxa1	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr2_-_62483637_62483653	19.5936	Foxa2_Foxa1	ENSMUST00000136686.1|Gcg|ENSMUSG00000000394.9|glucagon 	ENSMUST00000102733.3|Gcg|ENSMUSG00000000394.9|glucagon
mm10_v2_chr14_+_73237891_73238007	18.7464	Foxa2_Foxa1	ENSMUST00000044405.6|Lpar6|ENSMUSG00000033446.6|lysophosphatidic acid receptor 6
mm10_v2_chr14_+_13454010_13454123	17.9284	Foxa2_Foxa1	ENSMUST00000112656.2|Synpr|ENSMUSG00000056296.10|synaptoporin
mm10_v2_chr2_+_181767283_181767322	13.5573	Foxa2_Foxa1	ENSMUST00000108757.2|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr2_+_181767040_181767073	13.4594	Foxa2_Foxa1	ENSMUST00000108756.1|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr8_+_45628176_45628219	12.1077	Foxa2_Foxa1	ENSMUST00000130850.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr6_+_34709442_34709497	11.8516	Foxa2_Foxa1	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr17_+_29090969_29091020	11.7612	Foxa2_Foxa1	ENSMUST00000119901.1|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr1_-_138619687_138619759	11.5383	Foxa2_Foxa1	ENSMUST00000027642.2|Nek7|ENSMUSG00000026393.4|NIMA (never in mitosis gene a)-related expressed kinase 7
mm10_v2_chr6_+_34709610_34709635	11.43	Foxa2_Foxa1	ENSMUST00000031775.6|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr8_+_45658666_45658728	11.3509	Foxa2_Foxa1	ENSMUST00000134675.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000139869.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000126067.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr18_-_62756275_62756347	11.2499	Foxa2_Foxa1	ENSMUST00000067450.1|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene 	ENSMUST00000048109.5|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene
mm10_v2_chr8_+_45658731_45658804	11.0159	Foxa2_Foxa1	ENSMUST00000143820.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000132139.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr17_-_70851710_70851738	10.2635	Foxa2_Foxa1	ENSMUST00000166395.2|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr4_+_97777606_97777632	9.89079	Foxa2_Foxa1	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr1_-_97977233_97977279	9.4876	Foxa2_Foxa1	ENSMUST00000161567.1|Pam|ENSMUSG00000026335.10|peptidylglycine alpha-amidating monooxygenase
mm10_v2_chr4_-_82885148_82885148	9.25983	Foxa2_Foxa1	ENSMUST00000048430.3|Cer1|ENSMUSG00000038192.5|cerberus 1 homolog (Xenopus laevis)
mm10_v2_chr8_+_127064022_127064086	9.19379	Foxa2_Foxa1	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr10_-_128180265_128180307	8.9655	Foxa2_Foxa1	ENSMUST00000099139.1|Rbms2|ENSMUSG00000040043.9|RNA binding motif, single stranded interacting protein 2
mm10_v2_chr14_+_13453937_13453958	8.92138	Foxa2_Foxa1	ENSMUST00000153954.1|Synpr|ENSMUSG00000056296.10|synaptoporin
mm10_v2_chr2_+_26973416_26973505	8.76869	Foxa2_Foxa1	ENSMUST00000014996.7|Adamts13|ENSMUSG00000014852.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13 	ENSMUST00000102891.3|Adamts13|ENSMUSG00000014852.10|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
mm10_v2_chr12_-_31950170_31950197	7.86119	Foxa2_Foxa1	ENSMUST00000176520.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr12_-_31950210_31950246	7.48729	Foxa2_Foxa1	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr10_-_49783259_49783582	7.48646	Foxa2_Foxa1	ENSMUST00000105484.3|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105486.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000079751.2|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105485.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr15_-_84855093_84855127	7.35811	Foxa2_Foxa1	ENSMUST00000016768.5|Phf21b|ENSMUSG00000016624.9|PHD finger protein 21B
mm10_v2_chr7_+_29071597_29071613	7.12713	Foxa2_Foxa1	ENSMUST00000180926.1|Gm26604|ENSMUSG00000097079.1|predicted gene, 26604
mm10_v2_chr18_-_47333311_47333373	7.04796	Foxa2_Foxa1	ENSMUST00000126684.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000156422.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr3_-_101836223_101836237	6.89667	Foxa2_Foxa1	ENSMUST00000061831.4|Mab21l3|ENSMUSG00000044313.7|mab-21-like 3 (C. elegans)
mm10_v2_chr6_+_14901344_14901364	6.63885	Foxa2_Foxa1	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr9_+_53850243_53850257	6.35742	Foxa2_Foxa1	ENSMUST00000048485.5|Sln|ENSMUSG00000042045.5|sarcolipin
mm10_v2_chr4_+_11191726_11191789	6.30392	Foxa2_Foxa1	ENSMUST00000029866.9|Ccne2|ENSMUSG00000028212.10|cyclin E2 	ENSMUST00000108324.3|Ccne2|ENSMUSG00000028212.10|cyclin E2
mm10_v2_chr3_-_52104891_52104922	6.01137	Foxa2_Foxa1	ENSMUST00000121440.1|Maml3|ENSMUSG00000061143.9|mastermind like 3 (Drosophila)
mm10_v2_chr12_-_99883429_99883460	6.0055	Foxa2_Foxa1	ENSMUST00000046485.3|Efcab11|ENSMUSG00000021176.5|EF-hand calcium binding domain 11
mm10_v2_chr14_-_48662740_48662872	6.0002	Foxa2_Foxa1	ENSMUST00000122009.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr7_+_67655414_67655447	5.9073	Foxa2_Foxa1	ENSMUST00000107470.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr19_+_37376359_37376422	5.89187	Foxa2_Foxa1	ENSMUST00000012587.3|Kif11|ENSMUSG00000012443.3|kinesin family member 11
mm10_v2_chr4_-_24430838_24430890	5.87325	Foxa2_Foxa1	ENSMUST00000183964.1|RP23-35K5.2|ENSMUSG00000099150.1|RP23-35K5.2
mm10_v2_chr2_-_18048784_18048822	5.84028	Foxa2_Foxa1	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr1_-_156034826_156034880	5.09987	Foxa2_Foxa1	ENSMUST00000141878.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1 	ENSMUST00000123705.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr6_-_23248264_23248390	5.0762	Foxa2_Foxa1	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr6_-_3494587_3494598	4.87306	Foxa2_Foxa1	ENSMUST00000049985.8|Hepacam2|ENSMUSG00000044156.8|HEPACAM family member 2
mm10_v2_chr16_-_63864114_63864182	4.81602	Foxa2_Foxa1	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr2_+_52072823_52072854	4.80608	Foxa2_Foxa1	ENSMUST00000112693.2|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast) 	ENSMUST00000069794.5|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast)
mm10_v2_chr12_-_31950535_31950560	4.76729	Foxa2_Foxa1	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr12_+_71016658_71016708	4.75983	Foxa2_Foxa1	ENSMUST00000125125.1|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr6_+_8948608_8948619	4.71023	Foxa2_Foxa1	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr9_+_74848437_74848531	4.68445	Foxa2_Foxa1	ENSMUST00000161862.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551 	ENSMUST00000160950.1|Gm20649|ENSMUSG00000093662.1|predicted gene 20649 	ENSMUST00000162089.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551 	ENSMUST00000160017.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551
mm10_v2_chr10_-_93311073_93311161	4.66086	Foxa2_Foxa1	ENSMUST00000008542.5|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr4_+_11191354_11191424	4.63309	Foxa2_Foxa1	ENSMUST00000170901.1|Ccne2|ENSMUSG00000028212.10|cyclin E2
mm10_v2_chr3_+_131112785_131112803	4.52757	Foxa2_Foxa1	ENSMUST00000098611.3|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1
mm10_v2_chr3_+_5218546_5218561	4.52375	Foxa2_Foxa1	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr7_-_132813799_132813905	4.50513	Foxa2_Foxa1	ENSMUST00000097998.2|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr2_-_168601620_168601657	4.37772	Foxa2_Foxa1	ENSMUST00000171689.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 	ENSMUST00000137451.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm10_v2_chr2_-_113848655_113848744	4.3619	Foxa2_Foxa1	ENSMUST00000102545.1|Arhgap11a|ENSMUSG00000041219.8|Rho GTPase activating protein 11A 	ENSMUST00000110948.1|Arhgap11a|ENSMUSG00000041219.8|Rho GTPase activating protein 11A
mm10_v2_chr2_+_25180737_25180764	4.27237	Foxa2_Foxa1	ENSMUST00000104999.2|Nrarp|ENSMUSG00000078202.2|Notch-regulated ankyrin repeat protein
mm10_v2_chrX_+_106920618_106920632	4.25257	Foxa2_Foxa1	ENSMUST00000060576.7|Lpar4|ENSMUSG00000049929.7|lysophosphatidic acid receptor 4
mm10_v2_chr6_+_92940572_92940592	4.21945	Foxa2_Foxa1	ENSMUST00000181145.1|9530026P05Rik|ENSMUSG00000097462.1|RIKEN cDNA 9530026P05 gene 	ENSMUST00000181840.1|9530026P05Rik|ENSMUSG00000097462.1|RIKEN cDNA 9530026P05 gene
mm10_v2_chr3_+_5218516_5218544	4.16005	Foxa2_Foxa1	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr3_+_76075583_76075583	3.9686	Foxa2_Foxa1	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr14_+_46832127_46832151	3.81639	Foxa2_Foxa1	ENSMUST00000068532.8|Cgrrf1|ENSMUSG00000055128.8|cell growth regulator with ring finger domain 1
mm10_v2_chr2_+_164403194_164403219	3.77854	Foxa2_Foxa1	ENSMUST00000017151.1|Rbpjl|ENSMUSG00000017007.3|recombination signal binding protein for immunoglobulin kappa J region-like
mm10_v2_chr13_-_83729544_83729584	3.77344	Foxa2_Foxa1	ENSMUST00000181705.1|Gm26803|ENSMUSG00000097265.1|predicted gene, 26803
mm10_v2_chr7_-_37773555_37773641	3.73767	Foxa2_Foxa1	ENSMUST00000176534.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr10_-_93310963_93310989	3.65582	Foxa2_Foxa1	ENSMUST00000151153.1|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr11_-_48826500_48826500	3.64672	Foxa2_Foxa1	ENSMUST00000161192.2|Gm12184|ENSMUSG00000078154.2|predicted gene 12184
mm10_v2_chr5_+_92809372_92809436	3.63359	Foxa2_Foxa1	ENSMUST00000113054.2|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr3_-_123672321_123672400	3.61874	Foxa2_Foxa1	ENSMUST00000172537.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 	ENSMUST00000029602.6|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chr11_-_48826655_48826655	3.59394	Foxa2_Foxa1	ENSMUST00000104959.1|Gm12184|ENSMUSG00000078154.2|predicted gene 12184
mm10_v2_chr12_-_73113407_73113456	3.52218	Foxa2_Foxa1	ENSMUST00000175693.1|Six4|ENSMUSG00000034460.8|sine oculis-related homeobox 4
mm10_v2_chr8_-_125492710_125492710	3.45953	Foxa2_Foxa1	ENSMUST00000108775.1|Sipa1l2|ENSMUSG00000001995.8|signal-induced proliferation-associated 1 like 2
mm10_v2_chr2_-_172940299_172940349	3.41101	Foxa2_Foxa1	ENSMUST00000009143.7|Bmp7|ENSMUSG00000008999.7|bone morphogenetic protein 7
mm10_v2_chr6_+_147032528_147032547	3.39679	Foxa2_Foxa1	ENSMUST00000036194.4|Rep15|ENSMUSG00000040121.4|RAB15 effector protein
mm10_v2_chr8_-_122699066_122699119	3.37486	Foxa2_Foxa1	ENSMUST00000127984.1|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm10_v2_chr10_+_88091070_88091076	3.29479	Foxa2_Foxa1	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr3_+_5218589_5218614	3.28946	Foxa2_Foxa1	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr14_+_55853997_55854036	3.2322	Foxa2_Foxa1	ENSMUST00000100529.3|Nynrin|ENSMUSG00000075592.3|NYN domain and retroviral integrase containing
mm10_v2_chr18_-_88927447_88927481	3.1458	Foxa2_Foxa1	ENSMUST00000147313.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr14_+_55854115_55854206	3.13482	Foxa2_Foxa1	ENSMUST00000168479.1|Nynrin|ENSMUSG00000075592.3|NYN domain and retroviral integrase containing
mm10_v2_chr1_-_156034800_156034817	3.05679	Foxa2_Foxa1	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr11_-_49712674_49712726	2.9795	Foxa2_Foxa1	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr12_-_56535047_56535106	2.95868	Foxa2_Foxa1	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr2_-_160859601_160859631	2.93741	Foxa2_Foxa1	ENSMUST00000103112.1|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3
mm10_v2_chr2_-_18048347_18048449	2.87095	Foxa2_Foxa1	ENSMUST00000066885.5|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr2_-_154569720_154569799	2.85989	Foxa2_Foxa1	ENSMUST00000000894.5|E2f1|ENSMUSG00000027490.11|E2F transcription factor 1
mm10_v2_chr18_-_6136057_6136098	2.82876	Foxa2_Foxa1	ENSMUST00000182559.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12
mm10_v2_chr3_+_76593550_76593550	2.76675	Foxa2_Foxa1	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr2_+_110597298_110597316	2.65928	Foxa2_Foxa1	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr14_+_84443553_84443568	2.65493	Foxa2_Foxa1	ENSMUST00000071370.5|Pcdh17|ENSMUSG00000035566.6|protocadherin 17
mm10_v2_chrX_+_35888808_35888859	2.60452	Foxa2_Foxa1	ENSMUST00000033419.6|Dock11|ENSMUSG00000031093.8|dedicator of cytokinesis 11
mm10_v2_chrX_-_108834303_108834381	2.59313	Foxa2_Foxa1	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chrX_-_94123087_94123159	2.59037	Foxa2_Foxa1	ENSMUST00000113925.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked
mm10_v2_chr4_+_97777780_97777834	2.58415	Foxa2_Foxa1	ENSMUST00000107062.2|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000052018.5|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000107057.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr2_-_154569845_154569892	2.58219	Foxa2_Foxa1	ENSMUST00000103145.4|E2f1|ENSMUSG00000027490.11|E2F transcription factor 1
mm10_v2_chr18_-_6135888_6135999	2.57923	Foxa2_Foxa1	ENSMUST00000182383.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000062584.7|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000077128.6|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000182038.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000182213.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12
mm10_v2_chr4_+_98546919_98546973	2.53682	Foxa2_Foxa1	ENSMUST00000030290.7|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr12_+_38781093_38781129	2.53499	Foxa2_Foxa1	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr7_-_109960461_109960477	2.47534	Foxa2_Foxa1	ENSMUST00000080437.6|Dennd5a|ENSMUSG00000035901.8|DENN/MADD domain containing 5A
mm10_v2_chr2_-_70825726_70825820	2.46527	Foxa2_Foxa1	ENSMUST00000038584.8|Tlk1|ENSMUSG00000041997.10|tousled-like kinase 1
mm10_v2_chr11_+_46235460_46235531	2.45463	Foxa2_Foxa1	ENSMUST00000060185.2|Fndc9|ENSMUSG00000048721.2|fibronectin type III domain containing 9
mm10_v2_chr1_-_170867761_170867784	2.37833	Foxa2_Foxa1	ENSMUST00000027974.6|Atf6|ENSMUSG00000026663.6|activating transcription factor 6
mm10_v2_chr7_-_109960385_109960433	2.34745	Foxa2_Foxa1	ENSMUST00000106722.1|Dennd5a|ENSMUSG00000035901.8|DENN/MADD domain containing 5A
mm10_v2_chr1_+_156838915_156838978	2.31654	Foxa2_Foxa1	ENSMUST00000111720.1|Angptl1|ENSMUSG00000033544.6|angiopoietin-like 1
mm10_v2_chr4_+_140701466_140701509	2.3153	Foxa2_Foxa1	ENSMUST00000038893.5|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2 	ENSMUST00000138808.1|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr2_-_170427828_170427852	2.2805	Foxa2_Foxa1	ENSMUST00000013667.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000109152.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000068137.4|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1
mm10_v2_chr12_+_76370266_76370266	2.25934	Foxa2_Foxa1	ENSMUST00000042779.3|Zbtb1|ENSMUSG00000033454.6|zinc finger and BTB domain containing 1
mm10_v2_chr11_-_100146120_100146120	2.20759	Foxa2_Foxa1	ENSMUST00000007317.7|Krt19|ENSMUSG00000020911.8|keratin 19
mm10_v2_chr19_-_58455398_58455458	2.20273	Foxa2_Foxa1	ENSMUST00000026076.7|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr15_+_4375462_4375511	2.19153	Foxa2_Foxa1	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr17_+_28858411_28858499	2.18697	Foxa2_Foxa1	ENSMUST00000114737.1|Pnpla1|ENSMUSG00000043286.5|patatin-like phospholipase domain containing 1 	ENSMUST00000056866.5|Pnpla1|ENSMUSG00000043286.5|patatin-like phospholipase domain containing 1
mm10_v2_chr2_+_14873656_14873820	2.15896	Foxa2_Foxa1	ENSMUST00000114718.1|Cacnb2|ENSMUSG00000057914.9|calcium channel, voltage-dependent, beta 2 subunit 	ENSMUST00000114719.1|Cacnb2|ENSMUSG00000057914.9|calcium channel, voltage-dependent, beta 2 subunit
mm10_v2_chr4_+_43669610_43669678	2.11174	Foxa2_Foxa1	ENSMUST00000107866.1|Tmem8b|ENSMUSG00000078716.3|transmembrane protein 8B
mm10_v2_chr2_+_18064645_18064705	2.09216	Foxa2_Foxa1	ENSMUST00000114680.2|Mllt10|ENSMUSG00000026743.10|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm10_v2_chr4_+_98546710_98546739	2.08506	Foxa2_Foxa1	ENSMUST00000102792.3|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr18_-_7626809_7626880	2.07993	Foxa2_Foxa1	ENSMUST00000115869.2|Mpp7|ENSMUSG00000057440.7|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
mm10_v2_chr15_-_50890396_50890463	2.07532	Foxa2_Foxa1	ENSMUST00000185183.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr4_-_58499398_58499409	2.07413	Foxa2_Foxa1	ENSMUST00000107570.1|Lpar1|ENSMUSG00000038668.8|lysophosphatidic acid receptor 1
mm10_v2_chr12_+_38780817_38780854	2.06584	Foxa2_Foxa1	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr14_+_32599922_32599932	2.03071	Foxa2_Foxa1	ENSMUST00000068938.5|Prrxl1|ENSMUSG00000041730.7|paired related homeobox protein-like 1
mm10_v2_chr9_+_96196246_96196280	2.00126	Foxa2_Foxa1	ENSMUST00000165120.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000034982.9|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chrX_+_159303266_159303281	1.98586	Foxa2_Foxa1	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr13_+_44840686_44840697	1.97323	Foxa2_Foxa1	ENSMUST00000173906.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr19_+_55741810_55741842	1.9621	Foxa2_Foxa1	ENSMUST00000111657.3|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000061496.9|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000041717.7|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111662.4|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr15_-_89170688_89170688	1.92304	Foxa2_Foxa1	ENSMUST00000060808.9|Plxnb2|ENSMUSG00000036606.10|plexin B2
mm10_v2_chr4_+_11579647_11579674	1.91255	Foxa2_Foxa1	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr19_-_58455903_58455914	1.892	Foxa2_Foxa1	ENSMUST00000131877.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr1_-_13374072_13374083	1.88261	Foxa2_Foxa1	ENSMUST00000068304.6|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2 	ENSMUST00000006037.6|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr19_-_58455161_58455324	1.83882	Foxa2_Foxa1	ENSMUST00000135730.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1 	ENSMUST00000152507.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr14_+_66784523_66784537	1.83077	Foxa2_Foxa1	ENSMUST00000071522.2|Gm10032|ENSMUSG00000057913.2|predicted gene 10032
mm10_v2_chr7_-_84679346_84679401	1.81841	Foxa2_Foxa1	ENSMUST00000069537.2|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6 	ENSMUST00000178385.1|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6
mm10_v2_chr1_-_128592284_128592307	1.78084	Foxa2_Foxa1	ENSMUST00000052172.6|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4 	ENSMUST00000142893.1|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4
mm10_v2_chr4_+_11123950_11123980	1.77754	Foxa2_Foxa1	ENSMUST00000142297.1|Gm11827|ENSMUSG00000086765.1|predicted gene 11827
mm10_v2_chr4_-_118409219_118409282	1.777	Foxa2_Foxa1	ENSMUST00000075406.5|Szt2|ENSMUSG00000033253.12|seizure threshold 2
mm10_v2_chr10_+_128909866_128909873	1.77189	Foxa2_Foxa1	ENSMUST00000026407.7|Cd63|ENSMUSG00000025351.7|CD63 antigen
mm10_v2_chr5_+_120431770_120431905	1.75684	Foxa2_Foxa1	ENSMUST00000031591.7|Lhx5|ENSMUSG00000029595.7|LIM homeobox protein 5
mm10_v2_chr16_-_22161450_22161450	1.68574	Foxa2_Foxa1	ENSMUST00000115379.1|Igf2bp2|ENSMUSG00000033581.10|insulin-like growth factor 2 mRNA binding protein 2
mm10_v2_chrX_+_96455359_96455411	1.66356	Foxa2_Foxa1	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr1_-_183147461_183147461	1.64817	Foxa2_Foxa1	ENSMUST00000171366.1|Disp1|ENSMUSG00000030768.6|dispatched homolog 1 (Drosophila)
mm10_v2_chr17_+_85613432_85613608	1.64601	Foxa2_Foxa1	ENSMUST00000176081.1|Six3|ENSMUSG00000038805.9|sine oculis-related homeobox 3
mm10_v2_chrX_+_109095359_109095391	1.63506	Foxa2_Foxa1	ENSMUST00000033598.8|Sh3bgrl|ENSMUSG00000031246.8|SH3-binding domain glutamic acid-rich protein like
mm10_v2_chrX_+_74424534_74424629	1.63256	Foxa2_Foxa1	ENSMUST00000135165.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000114128.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000114133.2|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000004330.3|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma
mm10_v2_chr7_-_34655500_34655515	1.6233	Foxa2_Foxa1	ENSMUST00000032709.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr7_-_133123770_133123876	1.5945	Foxa2_Foxa1	ENSMUST00000164896.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000171968.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr10_-_76442758_76442912	1.57576	Foxa2_Foxa1	ENSMUST00000001179.5|Pcnt|ENSMUSG00000001151.9|pericentrin (kendrin)
mm10_v2_chr3_-_106167564_106167564	1.56187	Foxa2_Foxa1	ENSMUST00000063062.8|Chi3l3|ENSMUSG00000040809.10|chitinase 3-like 3
mm10_v2_chr6_+_5390387_5390427	1.53356	Foxa2_Foxa1	ENSMUST00000183358.1|Asb4|ENSMUSG00000042607.9|ankyrin repeat and SOCS box-containing 4
mm10_v2_chr16_+_20611585_20611635	1.49776	Foxa2_Foxa1	ENSMUST00000115522.2|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000119224.1|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000079600.4|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2 	ENSMUST00000120394.1|Ece2|ENSMUSG00000022842.10|endothelin converting enzyme 2
mm10_v2_chr16_+_43364145_43364204	1.4831	Foxa2_Foxa1	ENSMUST00000148775.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr14_-_24486994_24487064	1.43203	Foxa2_Foxa1	ENSMUST00000026322.7|Polr3a|ENSMUSG00000025280.7|polymerase (RNA) III (DNA directed) polypeptide A
mm10_v2_chr17_-_45474839_45474938	1.42062	Foxa2_Foxa1	ENSMUST00000024731.8|Spats1|ENSMUSG00000023935.9|spermatogenesis associated, serine-rich 1
mm10_v2_chr2_+_50066429_50066469	1.38314	Foxa2_Foxa1	ENSMUST00000112712.3|Lypd6|ENSMUSG00000050447.9|LY6/PLAUR domain containing 6 	ENSMUST00000128451.1|Lypd6|ENSMUSG00000050447.9|LY6/PLAUR domain containing 6 	ENSMUST00000053208.7|Lypd6|ENSMUSG00000050447.9|LY6/PLAUR domain containing 6
mm10_v2_chr2_-_66256576_66256645	1.3551	Foxa2_Foxa1	ENSMUST00000125446.2|Ttc21b|ENSMUSG00000034848.11|tetratricopeptide repeat domain 21B 	ENSMUST00000102718.3|Ttc21b|ENSMUSG00000034848.11|tetratricopeptide repeat domain 21B
mm10_v2_chr8_-_31918203_31918368	1.32803	Foxa2_Foxa1	ENSMUST00000073884.4|Nrg1|ENSMUSG00000062991.6|neuregulin 1
mm10_v2_chr7_-_133123409_133123472	1.31768	Foxa2_Foxa1	ENSMUST00000170459.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000166400.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr10_+_128908907_128908925	1.29451	Foxa2_Foxa1	ENSMUST00000105229.1|Cd63|ENSMUSG00000025351.7|CD63 antigen
mm10_v2_chr1_+_10056922_10056926	1.29058	Foxa2_Foxa1	ENSMUST00000149214.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1
mm10_v2_chr3_+_32397671_32397671	1.28565	Foxa2_Foxa1	ENSMUST00000108243.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr3_-_46447939_46447980	1.28075	Foxa2_Foxa1	ENSMUST00000166505.1|Pabpc4l|ENSMUSG00000090919.1|poly(A) binding protein, cytoplasmic 4-like
mm10_v2_chr1_+_132298606_132298631	1.27237	Foxa2_Foxa1	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr18_+_4920509_4920586	1.26745	Foxa2_Foxa1	ENSMUST00000126977.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr15_-_55548164_55548164	1.25758	Foxa2_Foxa1	ENSMUST00000165356.1|Mrpl13|ENSMUSG00000022370.7|mitochondrial ribosomal protein L13
mm10_v2_chr4_+_118409331_118409401	1.24598	Foxa2_Foxa1	ENSMUST00000084319.4|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000106384.3|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000126089.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000073881.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000019229.8|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000144577.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm10_v2_chr16_+_37868383_37868481	1.24553	Foxa2_Foxa1	ENSMUST00000078717.6|Lrrc58|ENSMUSG00000034158.9|leucine rich repeat containing 58
mm10_v2_chr2_+_158306493_158306653	1.23576	Foxa2_Foxa1	ENSMUST00000016168.2|Lbp|ENSMUSG00000016024.3|lipopolysaccharide binding protein 	ENSMUST00000109491.1|Lbp|ENSMUSG00000016024.3|lipopolysaccharide binding protein
mm10_v2_chr14_-_101609033_101609191	1.23567	Foxa2_Foxa1	ENSMUST00000161991.1|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4 	ENSMUST00000100340.3|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4
mm10_v2_chr2_-_104742802_104742878	1.22255	Foxa2_Foxa1	ENSMUST00000028595.7|Depdc7|ENSMUSG00000027173.7|DEP domain containing 7
mm10_v2_chr8_-_121944886_121944908	1.22181	Foxa2_Foxa1	ENSMUST00000057653.7|Car5a|ENSMUSG00000025317.7|carbonic anhydrase 5a, mitochondrial
mm10_v2_chr5_-_149051604_149051624	1.21795	Foxa2_Foxa1	ENSMUST00000093196.4|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr10_+_111506286_111506286	1.21663	Foxa2_Foxa1	ENSMUST00000164773.1|Phlda1|ENSMUSG00000020205.7|pleckstrin homology-like domain, family A, member 1
mm10_v2_chr12_+_38780284_38780349	1.2093	Foxa2_Foxa1	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr7_+_24907618_24907647	1.20902	Foxa2_Foxa1	ENSMUST00000151121.1|Arhgef1|ENSMUSG00000040940.12|Rho guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr19_+_55741884_55741919	1.20831	Foxa2_Foxa1	ENSMUST00000111658.3|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111654.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr19_-_53371766_53371766	1.20171	Foxa2_Foxa1	ENSMUST00000086887.1|Gm10197|ENSMUSG00000067085.1|predicted gene 10197
mm10_v2_chr2_+_4718145_4718205	1.19448	Foxa2_Foxa1	ENSMUST00000056914.6|Bend7|ENSMUSG00000048186.8|BEN domain containing 7
mm10_v2_chr11_-_68386821_68386835	1.19432	Foxa2_Foxa1	ENSMUST00000021284.3|Ntn1|ENSMUSG00000020902.6|netrin 1
mm10_v2_chr10_-_21160925_21160984	1.1894	Foxa2_Foxa1	ENSMUST00000020158.6|Myb|ENSMUSG00000019982.8|myeloblastosis oncogene
mm10_v2_chr3_-_116614587_116614587	1.17021	Foxa2_Foxa1	ENSMUST00000041524.4|Trmt13|ENSMUSG00000033439.6|tRNA methyltransferase 13
mm10_v2_chr14_-_121915774_121915793	1.16621	Foxa2_Foxa1	ENSMUST00000055475.7|Gpr18|ENSMUSG00000050350.7|G protein-coupled receptor 18
mm10_v2_chrX_+_169685191_169685250	1.16391	Foxa2_Foxa1	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr7_-_87493371_87493438	1.16321	Foxa2_Foxa1	ENSMUST00000004770.5|Tyr|ENSMUSG00000004651.5|tyrosinase
mm10_v2_chr7_+_81862674_81862692	1.15141	Foxa2_Foxa1	ENSMUST00000119543.1|Tm6sf1|ENSMUSG00000038623.3|transmembrane 6 superfamily member 1
mm10_v2_chr16_+_43363855_43363888	1.12155	Foxa2_Foxa1	ENSMUST00000156367.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr15_-_50882806_50882822	1.11296	Foxa2_Foxa1	ENSMUST00000184885.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr17_-_24163668_24163771	1.06508	Foxa2_Foxa1	ENSMUST00000040735.5|Amdhd2|ENSMUSG00000036820.5|amidohydrolase domain containing 2
mm10_v2_chr7_-_65371210_65371287	1.05244	Foxa2_Foxa1	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr13_+_23531044_23531088	1.0468	Foxa2_Foxa1	ENSMUST00000102972.3|Hist1h4h|ENSMUSG00000060981.5|histone cluster 1, H4h
mm10_v2_chr16_+_33518278_33518340	1.03364	Foxa2_Foxa1	ENSMUST00000122427.1|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8 	ENSMUST00000059056.8|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8
mm10_v2_chr1_+_12718496_12718545	1.03132	Foxa2_Foxa1	ENSMUST00000088585.3|Sulf1|ENSMUSG00000016918.9|sulfatase 1
mm10_v2_chr9_+_14784660_14784702	1.02011	Foxa2_Foxa1	ENSMUST00000115632.3|Mre11a|ENSMUSG00000031928.8|meiotic recombination 11 homolog A (S. cerevisiae) 	ENSMUST00000147305.1|Mre11a|ENSMUSG00000031928.8|meiotic recombination 11 homolog A (S. cerevisiae)
mm10_v2_chr8_-_47713920_47713938	1.01927	Foxa2_Foxa1	ENSMUST00000038738.5|Cdkn2aip|ENSMUSG00000038069.5|CDKN2A interacting protein
mm10_v2_chr7_+_30565410_30565432	1.0186	Foxa2_Foxa1	ENSMUST00000043850.7|Igflr1|ENSMUSG00000036826.8|IGF-like family receptor 1
mm10_v2_chr15_+_59648350_59648369	1.0168	Foxa2_Foxa1	ENSMUST00000067543.6|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
mm10_v2_chr9_+_43744399_43744576	1.00571	Foxa2_Foxa1	ENSMUST00000034510.7|Pvrl1|ENSMUSG00000032012.7|poliovirus receptor-related 1
mm10_v2_chr8_+_69300776_69300776	0.991726	Foxa2_Foxa1	ENSMUST00000078257.6|D130040H23Rik|ENSMUSG00000079038.2|RIKEN cDNA D130040H23 gene
mm10_v2_chr11_+_115824029_115824097	0.984928	Foxa2_Foxa1	ENSMUST00000103032.4|Llgl2|ENSMUSG00000020782.12|lethal giant larvae homolog 2 (Drosophila) 	ENSMUST00000133250.1|Llgl2|ENSMUSG00000020782.12|lethal giant larvae homolog 2 (Drosophila) 	ENSMUST00000177736.1|Llgl2|ENSMUSG00000020782.12|lethal giant larvae homolog 2 (Drosophila)
mm10_v2_chr2_+_143915273_143915337	0.957027	Foxa2_Foxa1	ENSMUST00000103172.3|Dstn|ENSMUSG00000015932.8|destrin
mm10_v2_chr19_+_5041337_5041416	0.943598	Foxa2_Foxa1	ENSMUST00000116567.2|Brms1|ENSMUSG00000080268.3|breast cancer metastasis-suppressor 1
mm10_v2_chrX_+_74424632_74424671	0.940284	Foxa2_Foxa1	ENSMUST00000114129.2|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000132749.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma
mm10_v2_chr13_+_113342548_113342548	0.937995	Foxa2_Foxa1	ENSMUST00000078163.7|BC067074|ENSMUSG00000021763.10|cDNA sequence BC067074
mm10_v2_chr18_+_52465676_52465710	0.935059	Foxa2_Foxa1	ENSMUST00000025406.7|Srfbp1|ENSMUSG00000024528.7|serum response factor binding protein 1
mm10_v2_chr6_+_14901440_14901497	0.926856	Foxa2_Foxa1	ENSMUST00000128567.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr2_+_27676440_27676454	0.913618	Foxa2_Foxa1	ENSMUST00000129514.1|Rxra|ENSMUSG00000015846.8|retinoid X receptor alpha
mm10_v2_chr2_-_65529275_65529404	0.90977	Foxa2_Foxa1	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr13_+_83738874_83738887	0.89981	Foxa2_Foxa1	ENSMUST00000052354.4|C130071C03Rik|ENSMUSG00000050334.6|RIKEN cDNA C130071C03 gene
mm10_v2_chr15_+_59648644_59648687	0.898626	Foxa2_Foxa1	ENSMUST00000118228.1|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
mm10_v2_chr1_-_157256682_157256701	0.887487	Foxa2_Foxa1	ENSMUST00000134543.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr12_-_108003414_108003571	0.885221	Foxa2_Foxa1	ENSMUST00000109887.1|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B 	ENSMUST00000109891.2|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr8_+_68276567_68276705	0.873222	Foxa2_Foxa1	ENSMUST00000066594.3|Sh2d4a|ENSMUSG00000053886.3|SH2 domain containing 4A
mm10_v2_chr9_+_53537021_53537074	0.862168	Foxa2_Foxa1	ENSMUST00000035850.7|Npat|ENSMUSG00000033054.7|nuclear protein in the AT region
mm10_v2_chr17_-_36020525_36020570	0.852888	Foxa2_Foxa1	ENSMUST00000174063.1|H2-T24|ENSMUSG00000053835.11|histocompatibility 2, T region locus 24 	ENSMUST00000113760.3|H2-T24|ENSMUSG00000053835.11|histocompatibility 2, T region locus 24
mm10_v2_chr5_-_20951769_20951824	0.828743	Foxa2_Foxa1	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr10_-_14718191_14718228	0.826531	Foxa2_Foxa1	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr17_+_7925990_7926006	0.822845	Foxa2_Foxa1	ENSMUST00000036370.7|Tagap|ENSMUSG00000033450.7|T cell activation Rho GTPase activating protein
mm10_v2_chr11_+_29463735_29463888	0.822827	Foxa2_Foxa1	ENSMUST00000155854.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr10_+_96616998_96617015	0.82093	Foxa2_Foxa1	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr9_+_14784638_14784658	0.802535	Foxa2_Foxa1	ENSMUST00000034405.4|Mre11a|ENSMUSG00000031928.8|meiotic recombination 11 homolog A (S. cerevisiae)
mm10_v2_chr7_+_90426312_90426312	0.797318	Foxa2_Foxa1	ENSMUST00000061391.7|Ccdc89|ENSMUSG00000044362.7|coiled-coil domain containing 89
mm10_v2_chr2_-_170194033_170194064	0.791472	Foxa2_Foxa1	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr19_+_55742056_55742066	0.79105	Foxa2_Foxa1	ENSMUST00000111659.2|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr12_-_56536895_56536937	0.788171	Foxa2_Foxa1	ENSMUST00000001536.8|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr19_-_28010995_28011054	0.778064	Foxa2_Foxa1	ENSMUST00000172907.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression) 	ENSMUST00000046898.9|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr2_-_71055534_71055611	0.766787	Foxa2_Foxa1	ENSMUST00000090849.5|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000100037.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000112186.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8
mm10_v2_chr14_-_88471396_88471396	0.765976	Foxa2_Foxa1	ENSMUST00000061628.5|Pcdh20|ENSMUSG00000050505.6|protocadherin 20
mm10_v2_chr17_-_56121946_56121958	0.76595	Foxa2_Foxa1	ENSMUST00000041357.7|Lrg1|ENSMUSG00000037095.7|leucine-rich alpha-2-glycoprotein 1
mm10_v2_chr12_-_57546121_57546141	0.765149	Foxa2_Foxa1	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr13_+_55209776_55209788	0.739909	Foxa2_Foxa1	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr18_-_38918642_38918771	0.701924	Foxa2_Foxa1	ENSMUST00000040647.4|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chrM_+_2743_2761	0.695788	Foxa2_Foxa1	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr17_-_79896028_79896123	0.681508	Foxa2_Foxa1	ENSMUST00000068282.5|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2 	ENSMUST00000112437.1|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2
mm10_v2_chr5_-_149051300_149051390	0.66901	Foxa2_Foxa1	ENSMUST00000110505.1|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr9_+_107580117_107580117	0.666286	Foxa2_Foxa1	ENSMUST00000093785.4|Nat6|ENSMUSG00000079334.2|N-acetyltransferase 6
mm10_v2_chr11_-_17008647_17008702	0.652258	Foxa2_Foxa1	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr19_+_30030439_30030528	0.649967	Foxa2_Foxa1	ENSMUST00000025739.7|Uhrf2|ENSMUSG00000024817.7|ubiquitin-like, containing PHD and RING finger domains 2
mm10_v2_chr3_-_131344892_131344940	0.649745	Foxa2_Foxa1	ENSMUST00000090246.4|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2 	ENSMUST00000126569.1|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2
mm10_v2_chr5_-_115098295_115098295	0.647087	Foxa2_Foxa1	ENSMUST00000100848.2|Gm10401|ENSMUSG00000072693.2|predicted gene 10401
mm10_v2_chr7_+_102229999_102230046	0.646356	Foxa2_Foxa1	ENSMUST00000120119.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2
mm10_v2_chr12_-_56613270_56613291	0.640862	Foxa2_Foxa1	ENSMUST00000072631.5|Nkx2-9|ENSMUSG00000058669.7|NK2 homeobox 9
mm10_v2_chr19_-_28011138_28011181	0.634487	Foxa2_Foxa1	ENSMUST00000174850.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr10_-_13388753_13388774	0.616308	Foxa2_Foxa1	ENSMUST00000105546.1|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr3_-_84270782_84270794	0.606295	Foxa2_Foxa1	ENSMUST00000054990.4|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr11_+_114851142_114851173	0.577281	Foxa2_Foxa1	ENSMUST00000133245.1|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C 	ENSMUST00000122967.2|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C
mm10_v2_chr12_-_99393010_99393090	0.559847	Foxa2_Foxa1	ENSMUST00000177451.1|Foxn3|ENSMUSG00000033713.5|forkhead box N3
mm10_v2_chr2_-_177267036_177267036	0.495226	Foxa2_Foxa1	ENSMUST00000108963.1|Gm14409|ENSMUSG00000078869.2|predicted gene 14409
mm10_v2_chr3_+_135825648_135825664	0.494565	Foxa2_Foxa1	ENSMUST00000180196.1|Slc39a8|ENSMUSG00000053897.9|solute carrier family 39 (metal ion transporter), member 8
mm10_v2_chrX_+_71663665_71663671	0.477771	Foxa2_Foxa1	ENSMUST00000070449.5|Gpr50|ENSMUSG00000056380.7|G-protein-coupled receptor 50
mm10_v2_chr2_+_164746028_164746039	0.466796	Foxa2_Foxa1	ENSMUST00000109327.3|Dnttip1|ENSMUSG00000017299.7|deoxynucleotidyltransferase, terminal, interacting protein 1
mm10_v2_chr4_-_55532453_55532485	0.459418	Foxa2_Foxa1	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chrX_+_94234982_94234997	0.459362	Foxa2_Foxa1	ENSMUST00000096369.3|Klhl15|ENSMUSG00000043929.10|kelch-like 15 	ENSMUST00000113911.2|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr11_+_43151599_43151599	0.446584	Foxa2_Foxa1	ENSMUST00000077659.5|Atp10b|ENSMUSG00000055415.7|ATPase, class V, type 10B
mm10_v2_chr16_+_24448082_24448153	0.445613	Foxa2_Foxa1	ENSMUST00000078988.2|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chrX_-_104671048_104671071	0.430936	Foxa2_Foxa1	ENSMUST00000042070.5|Zdhhc15|ENSMUSG00000033906.5|zinc finger, DHHC domain containing 15
mm10_v2_chr4_+_150853919_150854050	0.422342	Foxa2_Foxa1	ENSMUST00000073600.2|Errfi1|ENSMUSG00000028967.4|ERBB receptor feedback inhibitor 1
mm10_v2_chr18_+_22345089_22345089	0.402643	Foxa2_Foxa1	ENSMUST00000120223.1|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila) 	ENSMUST00000097655.3|Asxl3|ENSMUSG00000045215.10|additional sex combs like 3 (Drosophila)
mm10_v2_chr8_-_8639363_8639363	0.387394	Foxa2_Foxa1	ENSMUST00000152698.1|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr6_+_8520008_8520058	0.383861	Foxa2_Foxa1	ENSMUST00000162567.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1 	ENSMUST00000161217.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1
mm10_v2_chr9_-_60649793_60649805	0.38064	Foxa2_Foxa1	ENSMUST00000053171.7|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr7_+_140763739_140763828	0.370997	Foxa2_Foxa1	ENSMUST00000026552.7|Cyp2e1|ENSMUSG00000025479.8|cytochrome P450, family 2, subfamily e, polypeptide 1
mm10_v2_chr8_-_22653406_22653458	0.350769	Foxa2_Foxa1	ENSMUST00000033938.5|Polb|ENSMUSG00000031536.5|polymerase (DNA directed), beta
mm10_v2_chr11_-_76027726_76027802	0.346475	Foxa2_Foxa1	ENSMUST00000021207.6|Fam101b|ENSMUSG00000020846.6|family with sequence similarity 101, member B
mm10_v2_chr15_-_102722150_102722178	0.346166	Foxa2_Foxa1	ENSMUST00000023818.3|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr3_+_79884496_79884571	0.332072	Foxa2_Foxa1	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr1_-_170110491_170110532	0.292907	Foxa2_Foxa1	ENSMUST00000027985.2|Ddr2|ENSMUSG00000026674.3|discoidin domain receptor family, member 2
mm10_v2_chr2_+_164745979_164746025	0.291578	Foxa2_Foxa1	ENSMUST00000017443.7|Dnttip1|ENSMUSG00000017299.7|deoxynucleotidyltransferase, terminal, interacting protein 1 	ENSMUST00000109326.3|Dnttip1|ENSMUSG00000017299.7|deoxynucleotidyltransferase, terminal, interacting protein 1
mm10_v2_chr18_+_65580230_65580400	0.290368	Foxa2_Foxa1	ENSMUST00000049016.5|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532 	ENSMUST00000183236.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr15_-_102722120_102722137	0.27888	Foxa2_Foxa1	ENSMUST00000171838.1|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr3_+_96219858_96219873	0.278521	Foxa2_Foxa1	ENSMUST00000073115.4|Hist2h2ab|ENSMUSG00000063689.4|histone cluster 2, H2ab
mm10_v2_chr1_-_166409773_166409863	0.275977	Foxa2_Foxa1	ENSMUST00000135673.1|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000079972.6|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000169324.1|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000111411.2|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000128861.1|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain
mm10_v2_chr5_-_138170992_138171033	0.224458	Foxa2_Foxa1	ENSMUST00000139983.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr4_+_136357423_136357541	0.222551	Foxa2_Foxa1	ENSMUST00000182167.1|Gm17388|ENSMUSG00000097588.2|predicted gene, 17388
mm10_v2_chr10_-_13388830_13388970	0.220409	Foxa2_Foxa1	ENSMUST00000079698.5|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr3_-_122984404_122984512	0.218832	Foxa2_Foxa1	ENSMUST00000090379.2|Usp53|ENSMUSG00000039701.7|ubiquitin specific peptidase 53
mm10_v2_chr12_+_55089202_55089202	0.208079	Foxa2_Foxa1	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr5_-_87482258_87482283	0.187435	Foxa2_Foxa1	ENSMUST00000079811.6|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1 	ENSMUST00000144144.1|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1
mm10_v2_chr11_+_87699897_87699897	0.15411	Foxa2_Foxa1	ENSMUST00000040089.4|Rnf43|ENSMUSG00000034177.9|ring finger protein 43
mm10_v2_chr3_+_79884576_79884597	0.153313	Foxa2_Foxa1	ENSMUST00000145992.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr2_+_122028544_122028563	0.130723	Foxa2_Foxa1	ENSMUST00000028668.7|Eif3j1|ENSMUSG00000027236.8|eukaryotic translation initiation factor 3, subunit J1
mm10_v2_chr14_-_55643251_55643382	0.101926	Foxa2_Foxa1	ENSMUST00000120041.1|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1 	ENSMUST00000121937.1|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1 	ENSMUST00000133707.1|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1 	ENSMUST00000002391.8|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1 	ENSMUST00000121791.1|Tm9sf1|ENSMUSG00000002320.9|transmembrane 9 superfamily member 1
mm10_v2_chr2_-_147186389_147186413	0.0948278	Foxa2_Foxa1	ENSMUST00000109970.3|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2 	ENSMUST00000067075.5|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2
mm10_v2_chr11_+_88973928_88973961	0.0848068	Foxa2_Foxa1	ENSMUST00000036649.4|Coil|ENSMUSG00000033983.7|coilin 	ENSMUST00000107898.3|Coil|ENSMUSG00000033983.7|coilin
mm10_v2_chr2_+_76675265_76675287	0.078462	Foxa2_Foxa1	ENSMUST00000111920.1|Plekha3|ENSMUSG00000002733.8|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm10_v2_chr16_-_59632520_59632541	0.0744433	Foxa2_Foxa1	ENSMUST00000118438.1|Arl6|ENSMUSG00000022722.12|ADP-ribosylation factor-like 6
mm10_v2_chr7_+_24271568_24271568	0.0656834	Foxa2_Foxa1	ENSMUST00000032696.6|Zfp93|ENSMUSG00000055305.9|zinc finger protein 93
mm10_v2_chr9_-_69760924_69760940	0.0509675	Foxa2_Foxa1	ENSMUST00000071281.4|Foxb1|ENSMUSG00000059246.4|forkhead box B1
mm10_v2_chr6_+_29853746_29853790	0.0264759	Foxa2_Foxa1	ENSMUST00000064872.6|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000152581.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000176265.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000154079.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr7_+_130692532_130692575	0.0226256	Foxa2_Foxa1	ENSMUST00000033141.6|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
