mm10_v2_chrY_+_1010543_1010613	4.59669	Foxc1	ENSMUST00000091197.3|Eif2s3y|ENSMUSG00000069049.5|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
mm10_v2_chr12_-_113422730_113422744	2.98918	Foxc1	ENSMUST00000177715.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu 	ENSMUST00000103426.1|Ighm|ENSMUSG00000076617.3|immunoglobulin heavy constant mu
mm10_v2_chr3_-_87263518_87263599	2.64158	Foxc1	ENSMUST00000090986.4|Fcrls|ENSMUSG00000015852.7|Fc receptor-like S, scavenger receptor
mm10_v2_chr3_-_87263703_87263738	2.48749	Foxc1	ENSMUST00000146512.1|Fcrls|ENSMUSG00000015852.7|Fc receptor-like S, scavenger receptor
mm10_v2_chr15_+_78597047_78597121	1.82846	Foxc1	ENSMUST00000043069.5|Cyth4|ENSMUSG00000018008.7|cytohesin 4
mm10_v2_chr15_-_66948419_66948479	1.45678	Foxc1	ENSMUST00000167817.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1
mm10_v2_chr6_+_68161415_68161415	1.14268	Foxc1	ENSMUST00000168090.1|Igkv1-115|ENSMUSG00000091800.1|immunoglobulin kappa variable 1-115
mm10_v2_chr13_+_53525703_53525703	1.05621	Foxc1	ENSMUST00000081132.4|Gm5449|ENSMUSG00000063166.4|predicted pseudogene 5449
mm10_v2_chr13_-_49320219_49320311	0.989386	Foxc1	ENSMUST00000110086.1|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr1_+_72824482_72824503	0.982949	Foxc1	ENSMUST00000047328.4|Igfbp2|ENSMUSG00000039323.12|insulin-like growth factor binding protein 2
mm10_v2_chr6_-_42324554_42324599	0.947572	Foxc1	ENSMUST00000095974.3|Fam131b|ENSMUSG00000029861.11|family with sequence similarity 131, member B
mm10_v2_chr2_+_4976113_4976164	0.921327	Foxc1	ENSMUST00000167607.1|Ucma|ENSMUSG00000026668.4|upper zone of growth plate and cartilage matrix associated 	ENSMUST00000115010.2|Ucma|ENSMUSG00000026668.4|upper zone of growth plate and cartilage matrix associated
mm10_v2_chr6_-_42324640_42324671	0.87232	Foxc1	ENSMUST00000031891.8|Fam131b|ENSMUSG00000029861.11|family with sequence similarity 131, member B 	ENSMUST00000143278.1|Fam131b|ENSMUSG00000029861.11|family with sequence similarity 131, member B
mm10_v2_chr18_-_33463615_33463634	0.843545	Foxc1	ENSMUST00000051087.8|Nrep|ENSMUSG00000042834.8|neuronal regeneration related protein
mm10_v2_chr1_+_107511416_107511431	0.785441	Foxc1	ENSMUST00000009356.4|Serpinb2|ENSMUSG00000062345.4|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm10_v2_chr8_-_13494479_13494546	0.78347	Foxc1	ENSMUST00000033828.5|Gas6|ENSMUSG00000031451.5|growth arrest specific 6
mm10_v2_chr11_-_102296618_102296681	0.781374	Foxc1	ENSMUST00000107132.2|Atxn7l3|ENSMUSG00000059995.6|ataxin 7-like 3 	ENSMUST00000073234.2|Atxn7l3|ENSMUSG00000059995.6|ataxin 7-like 3
mm10_v2_chr1_-_87394721_87394734	0.765455	Foxc1	ENSMUST00000113212.3|Kcnj13|ENSMUSG00000079436.3|potassium inwardly-rectifying channel, subfamily J, member 13
mm10_v2_chr16_-_46155077_46155077	0.764563	Foxc1	ENSMUST00000059524.5|Gm4737|ENSMUSG00000048087.5|predicted gene 4737
mm10_v2_chr15_-_58034289_58034298	0.760458	Foxc1	ENSMUST00000100655.3|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene
mm10_v2_chr17_+_46254017_46254165	0.741016	Foxc1	ENSMUST00000095262.4|Lrrc73|ENSMUSG00000071073.4|leucine rich repeat containing 73
mm10_v2_chr1_+_107511489_107511502	0.712744	Foxc1	ENSMUST00000064916.2|Serpinb2|ENSMUSG00000062345.4|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm10_v2_chr15_+_6422240_6422327	0.706487	Foxc1	ENSMUST00000163082.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr15_-_76656905_76656934	0.693089	Foxc1	ENSMUST00000176274.1|Cyhr1|ENSMUSG00000053929.10|cysteine and histidine rich 1
mm10_v2_chr11_-_78550777_78550812	0.68333	Foxc1	ENSMUST00000103242.4|Tmem97|ENSMUSG00000037278.9|transmembrane protein 97
mm10_v2_chr16_-_21947536_21947577	0.66476	Foxc1	ENSMUST00000023562.7|Tmem41a|ENSMUSG00000022856.8|transmembrane protein 41a
mm10_v2_chr11_+_32300069_32300069	0.663746	Foxc1	ENSMUST00000020535.1|Hbq1a|ENSMUSG00000020295.1|hemoglobin, theta 1A
mm10_v2_chr12_+_105336922_105336993	0.65201	Foxc1	ENSMUST00000180503.1|2810011L19Rik|ENSMUSG00000097929.1|RIKEN cDNA 2810011L19 gene
mm10_v2_chr15_-_102667749_102667749	0.640301	Foxc1	ENSMUST00000075630.3|Atp5g2|ENSMUSG00000062683.5|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)
mm10_v2_chr7_+_16309577_16309641	0.632351	Foxc1	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr1_-_71653162_71653181	0.621354	Foxc1	ENSMUST00000055226.6|Fn1|ENSMUSG00000026193.9|fibronectin 1
mm10_v2_chr15_-_102257306_102257370	0.613649	Foxc1	ENSMUST00000135466.1|Rarg|ENSMUSG00000001288.8|retinoic acid receptor, gamma
mm10_v2_chr6_+_86371489_86371583	0.574517	Foxc1	ENSMUST00000089558.5|Snrpg|ENSMUSG00000057278.6|small nuclear ribonucleoprotein polypeptide G
mm10_v2_chr2_+_30807826_30807999	0.574445	Foxc1	ENSMUST00000041830.3|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1 	ENSMUST00000152374.1|Ntmt1|ENSMUSG00000026857.3|N-terminal Xaa-Pro-Lys N-methyltransferase 1
mm10_v2_chr2_-_126709567_126709567	0.57428	Foxc1	ENSMUST00000099423.2|Gm10774|ENSMUSG00000074846.2|predicted pseudogene 10774
mm10_v2_chr4_+_117550326_117550409	0.548896	Foxc1	ENSMUST00000037127.8|Eri3|ENSMUSG00000033423.10|exoribonuclease 3
mm10_v2_chr9_-_103222063_103222149	0.540672	Foxc1	ENSMUST00000170904.1|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr4_-_43030440_43030593	0.52676	Foxc1	ENSMUST00000135660.1|Stoml2|ENSMUSG00000028455.9|stomatin (Epb7.2)-like 2
mm10_v2_chr18_+_78349754_78349754	0.522123	Foxc1	ENSMUST00000164064.1|Gm6133|ENSMUSG00000090451.1|predicted gene 6133
mm10_v2_chr9_-_106891401_106891438	0.522003	Foxc1	ENSMUST00000069036.7|Manf|ENSMUSG00000032575.10|mesencephalic astrocyte-derived neurotrophic factor
mm10_v2_chr13_+_42680565_42680623	0.50484	Foxc1	ENSMUST00000128646.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr17_+_45686322_45686402	0.49761	Foxc1	ENSMUST00000024734.7|Mrpl14|ENSMUSG00000023939.7|mitochondrial ribosomal protein L14
mm10_v2_chr11_+_70017199_70017241	0.495242	Foxc1	ENSMUST00000133140.1|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr9_-_21037775_21037795	0.495067	Foxc1	ENSMUST00000180870.1|Gm26592|ENSMUSG00000097535.1|predicted gene, 26592
mm10_v2_chr14_-_31128924_31128960	0.494126	Foxc1	ENSMUST00000064032.4|Smim4|ENSMUSG00000058351.5|small itegral membrane protein 4 	ENSMUST00000049732.5|Smim4|ENSMUSG00000058351.5|small itegral membrane protein 4 	ENSMUST00000090205.3|Smim4|ENSMUSG00000058351.5|small itegral membrane protein 4
mm10_v2_chr3_-_95282076_95282076	0.489249	Foxc1	ENSMUST00000015855.7|Prune|ENSMUSG00000015711.8|prune homolog (Drosophila)
mm10_v2_chr3_-_141982224_141982264	0.487328	Foxc1	ENSMUST00000029948.8|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr18_+_33464163_33464163	0.486926	Foxc1	ENSMUST00000097634.3|Gm10549|ENSMUSG00000073610.3|predicted gene 10549
mm10_v2_chr3_-_96197580_96197634	0.477441	Foxc1	ENSMUST00000016087.3|Bola1|ENSMUSG00000015943.5|bolA-like 1 (E. coli)
mm10_v2_chr1_+_84839833_84839875	0.469777	Foxc1	ENSMUST00000097672.3|Fbxo36|ENSMUSG00000073633.3|F-box protein 36
mm10_v2_chr14_-_48662740_48662872	0.464921	Foxc1	ENSMUST00000122009.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr7_+_129257027_129257094	0.460986	Foxc1	ENSMUST00000094018.4|Ppapdc1a|ENSMUSG00000070366.4|phosphatidic acid phosphatase type 2 domain containing 1A
mm10_v2_chr9_+_110419750_110419809	0.454925	Foxc1	ENSMUST00000035061.6|Ngp|ENSMUSG00000032484.6|neutrophilic granule protein
mm10_v2_chr17_-_36951338_36951425	0.449322	Foxc1	ENSMUST00000173540.1|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm10_v2_chr11_+_73160403_73160421	0.447485	Foxc1	ENSMUST00000006104.3|P2rx5|ENSMUSG00000005950.8|purinergic receptor P2X, ligand-gated ion channel, 5
mm10_v2_chr4_-_40948196_40948296	0.43946	Foxc1	ENSMUST00000030125.4|Bag1|ENSMUSG00000028416.5|BCL2-associated athanogene 1 	ENSMUST00000108089.1|Bag1|ENSMUSG00000028416.5|BCL2-associated athanogene 1
mm10_v2_chr7_-_127026479_127026496	0.438159	Foxc1	ENSMUST00000032916.4|Maz|ENSMUSG00000030678.6|MYC-associated zinc finger protein (purine-binding transcription factor)
mm10_v2_chr1_+_120602405_120602418	0.437211	Foxc1	ENSMUST00000079721.7|En1|ENSMUSG00000058665.7|engrailed 1
mm10_v2_chr11_+_6415443_6415443	0.432747	Foxc1	ENSMUST00000132846.1|Ppia|ENSMUSG00000071866.5|peptidylprolyl isomerase A
mm10_v2_chr17_-_36951636_36951741	0.430522	Foxc1	ENSMUST00000040402.7|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11 	ENSMUST00000174711.1|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm10_v2_chr6_-_29212240_29212297	0.428399	Foxc1	ENSMUST00000160878.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1 	ENSMUST00000078155.5|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1
mm10_v2_chr15_-_102257449_102257517	0.424581	Foxc1	ENSMUST00000043172.8|Rarg|ENSMUSG00000001288.8|retinoic acid receptor, gamma
mm10_v2_chr3_-_89998656_89998704	0.421042	Foxc1	ENSMUST00000079724.4|Hax1|ENSMUSG00000027944.9|HCLS1 associated X-1
mm10_v2_chr8_+_106870827_106870891	0.41113	Foxc1	ENSMUST00000176144.1|Has3|ENSMUSG00000031910.8|hyaluronan synthase 3 	ENSMUST00000175987.1|Has3|ENSMUSG00000031910.8|hyaluronan synthase 3
mm10_v2_chr13_-_107414742_107414767	0.406832	Foxc1	ENSMUST00000061241.6|Apoo-ps|ENSMUSG00000049233.6|apolipoprotein O, pseudogene
mm10_v2_chr17_+_3397189_3397207	0.405995	Foxc1	ENSMUST00000072156.6|Tiam2|ENSMUSG00000023800.8|T cell lymphoma invasion and metastasis 2
mm10_v2_chr13_-_34077992_34078015	0.405986	Foxc1	ENSMUST00000056427.8|Tubb2a|ENSMUSG00000058672.6|tubulin, beta 2A class IIA
mm10_v2_chr8_-_25840440_25840461	0.403481	Foxc1	ENSMUST00000110609.1|Ash2l|ENSMUSG00000031575.11|ash2 (absent, small, or homeotic)-like (Drosophila)
mm10_v2_chr3_+_95160449_95160505	0.396499	Foxc1	ENSMUST00000090823.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENSMUST00000090821.3|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm10_v2_chr2_+_151542483_151542646	0.396132	Foxc1	ENSMUST00000044011.5|Fkbp1a|ENSMUSG00000032966.8|FK506 binding protein 1a
mm10_v2_chr15_+_102503722_102503722	0.386858	Foxc1	ENSMUST00000096145.4|Gm10337|ENSMUSG00000071586.4|predicted gene 10337
mm10_v2_chr10_+_77864623_77864623	0.381405	Foxc1	ENSMUST00000092366.2|Tspear|ENSMUSG00000069581.5|thrombospondin type laminin G domain and EAR repeats
mm10_v2_chr2_+_172370658_172370744	0.379038	Foxc1	ENSMUST00000151511.1|Cstf1|ENSMUSG00000027498.8|cleavage stimulation factor, 3' pre-RNA, subunit 1 	ENSMUST00000116375.1|Cstf1|ENSMUSG00000027498.8|cleavage stimulation factor, 3' pre-RNA, subunit 1
mm10_v2_chr5_-_135573036_135573051	0.377907	Foxc1	ENSMUST00000004936.6|Ccl24|ENSMUSG00000004814.7|chemokine (C-C motif) ligand 24
mm10_v2_chr14_+_113314602_113314608	0.375524	Foxc1	ENSMUST00000072359.6|Tpm3-rs7|ENSMUSG00000058126.6|tropomyosin 3, related sequence 7
mm10_v2_chr2_+_163994960_163994960	0.373652	Foxc1	ENSMUST00000018470.3|Ywhab|ENSMUSG00000018326.3|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm10_v2_chr13_-_18382041_18382041	0.371574	Foxc1	ENSMUST00000139064.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2 	ENSMUST00000175703.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2
mm10_v2_chr5_+_8046077_8046078	0.370957	Foxc1	ENSMUST00000088786.4|Sri|ENSMUSG00000003161.9|sorcin
mm10_v2_chr15_+_80255184_80255263	0.370277	Foxc1	ENSMUST00000109605.3|Atf4|ENSMUSG00000042406.7|activating transcription factor 4
mm10_v2_chr11_+_70017085_70017146	0.366391	Foxc1	ENSMUST00000108589.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr12_-_69198419_69198429	0.363537	Foxc1	ENSMUST00000021356.5|Dnaaf2|ENSMUSG00000020973.7|dynein, axonemal assembly factor 2
mm10_v2_chr7_-_89941084_89941185	0.362332	Foxc1	ENSMUST00000075010.4|l7Rn6|ENSMUSG00000062797.5|lethal, Chr 7, Rinchik 6 	ENSMUST00000153470.1|l7Rn6|ENSMUSG00000062797.5|lethal, Chr 7, Rinchik 6
mm10_v2_chrY_+_90843934_90843934	0.355687	Foxc1	ENSMUST00000178550.1|Gm21742|ENSMUSG00000095326.1|predicted gene, 21742
mm10_v2_chr7_+_44816088_44816088	0.346535	Foxc1	ENSMUST00000057195.9|Nup62|ENSMUSG00000043858.11|nucleoporin 62 	ENSMUST00000107891.1|Nup62|ENSMUSG00000043858.11|nucleoporin 62
mm10_v2_chr15_-_100599864_100599979	0.345181	Foxc1	ENSMUST00000177247.2|Pou6f1|ENSMUSG00000009739.10|POU domain, class 6, transcription factor 1 	ENSMUST00000177505.2|Pou6f1|ENSMUSG00000009739.10|POU domain, class 6, transcription factor 1
mm10_v2_chr17_+_37045980_37046080	0.344088	Foxc1	ENSMUST00000174456.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr17_-_70851710_70851738	0.339072	Foxc1	ENSMUST00000166395.2|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr9_-_86880414_86880467	0.327142	Foxc1	ENSMUST00000074501.5|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000098495.3|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000074468.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91 	ENSMUST00000036347.6|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91
mm10_v2_chr3_+_90079540_90079715	0.322595	Foxc1	ENSMUST00000029549.9|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000118566.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000119158.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma
mm10_v2_chr12_-_73047179_73047179	0.317897	Foxc1	ENSMUST00000050029.7|Six1|ENSMUSG00000051367.8|sine oculis-related homeobox 1
mm10_v2_chr3_+_94377432_94377451	0.317081	Foxc1	ENSMUST00000107292.1|Rorc|ENSMUSG00000028150.8|RAR-related orphan receptor gamma
mm10_v2_chr1_+_74284930_74285072	0.316078	Foxc1	ENSMUST00000113805.1|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000027370.6|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000087226.4|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia
mm10_v2_chr3_+_94377505_94377527	0.307819	Foxc1	ENSMUST00000098877.2|Rorc|ENSMUSG00000028150.8|RAR-related orphan receptor gamma
mm10_v2_chr9_-_86880647_86880659	0.307462	Foxc1	ENSMUST00000167014.1|Snap91|ENSMUSG00000033419.9|synaptosomal-associated protein 91
mm10_v2_chr3_+_124321031_124321113	0.304031	Foxc1	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr18_-_78123324_78123426	0.298732	Foxc1	ENSMUST00000160292.1|Slc14a1|ENSMUSG00000059336.8|solute carrier family 14 (urea transporter), member 1 	ENSMUST00000091813.5|Slc14a1|ENSMUSG00000059336.8|solute carrier family 14 (urea transporter), member 1
mm10_v2_chr11_-_4594750_4594820	0.29819	Foxc1	ENSMUST00000109943.3|Mtmr3|ENSMUSG00000034354.11|myotubularin related protein 3
mm10_v2_chr7_+_19228334_19228416	0.294786	Foxc1	ENSMUST00000063976.8|Opa3|ENSMUSG00000052214.8|optic atrophy 3
mm10_v2_chr6_+_47244359_47244417	0.290579	Foxc1	ENSMUST00000060839.6|Cntnap2|ENSMUSG00000039419.10|contactin associated protein-like 2
mm10_v2_chr3_+_154597352_154597438	0.285801	Foxc1	ENSMUST00000140644.1|Cryz|ENSMUSG00000028199.12|crystallin, zeta 	ENSMUST00000144764.1|Cryz|ENSMUSG00000028199.12|crystallin, zeta 	ENSMUST00000155232.1|Cryz|ENSMUSG00000028199.12|crystallin, zeta
mm10_v2_chr9_+_72806874_72806874	0.282802	Foxc1	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr16_-_97170707_97170759	0.282579	Foxc1	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr13_-_54611332_54611387	0.278912	Foxc1	ENSMUST00000091609.4|Cltb|ENSMUSG00000047547.8|clathrin, light polypeptide (Lcb)
mm10_v2_chr6_-_88045190_88045270	0.277508	Foxc1	ENSMUST00000113596.1|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family 	ENSMUST00000113600.3|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family
mm10_v2_chr13_-_54766553_54766595	0.271839	Foxc1	ENSMUST00000036825.7|Sncb|ENSMUSG00000034891.7|synuclein, beta
mm10_v2_chr9_-_60838200_60838200	0.270974	Foxc1	ENSMUST00000063858.7|Gm9869|ENSMUSG00000052143.7|predicted gene 9869
mm10_v2_chr15_-_97814830_97814878	0.266796	Foxc1	ENSMUST00000121514.1|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7
mm10_v2_chr3_+_61364507_61364633	0.266621	Foxc1	ENSMUST00000049064.2|Rap2b|ENSMUSG00000036894.2|RAP2B, member of RAS oncogene family
mm10_v2_chr15_-_100599983_100600039	0.264535	Foxc1	ENSMUST00000073837.6|Pou6f1|ENSMUSG00000009739.10|POU domain, class 6, transcription factor 1
mm10_v2_chr1_+_134182404_134182481	0.26411	Foxc1	ENSMUST00000153856.1|Chi3l1|ENSMUSG00000064246.4|chitinase 3-like 1 	ENSMUST00000082060.3|Chi3l1|ENSMUSG00000064246.4|chitinase 3-like 1 	ENSMUST00000133701.1|Chi3l1|ENSMUSG00000064246.4|chitinase 3-like 1 	ENSMUST00000132873.1|Chi3l1|ENSMUSG00000064246.4|chitinase 3-like 1
mm10_v2_chr1_+_34439851_34439910	0.264087	Foxc1	ENSMUST00000027303.7|Imp4|ENSMUSG00000026127.7|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm10_v2_chr2_-_103485068_103485137	0.263255	Foxc1	ENSMUST00000111168.3|Cat|ENSMUSG00000027187.4|catalase
mm10_v2_chr17_-_45685973_45686087	0.260629	Foxc1	ENSMUST00000145873.1|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr6_+_55203381_55203459	0.258782	Foxc1	ENSMUST00000053094.7|Fam188b|ENSMUSG00000038022.9|family with sequence similarity 188, member B
mm10_v2_chr11_-_98625661_98625661	0.25742	Foxc1	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr5_-_34187670_34187749	0.255826	Foxc1	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chr1_+_75236439_75236469	0.248847	Foxc1	ENSMUST00000082158.6|Dnajb2|ENSMUSG00000026203.10|DnaJ (Hsp40) homolog, subfamily B, member 2 	ENSMUST00000055223.7|Dnajb2|ENSMUSG00000026203.10|DnaJ (Hsp40) homolog, subfamily B, member 2
mm10_v2_chr13_-_54611274_54611297	0.246999	Foxc1	ENSMUST00000049575.7|Cltb|ENSMUSG00000047547.8|clathrin, light polypeptide (Lcb)
mm10_v2_chr7_-_51862216_51862281	0.246606	Foxc1	ENSMUST00000169357.1|Fancf|ENSMUSG00000092118.1|Fanconi anemia, complementation group F
mm10_v2_chr16_-_59632520_59632541	0.243289	Foxc1	ENSMUST00000118438.1|Arl6|ENSMUSG00000022722.12|ADP-ribosylation factor-like 6
mm10_v2_chr1_-_74284636_74284738	0.24179	Foxc1	ENSMUST00000178235.1|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein 	ENSMUST00000006462.7|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein
mm10_v2_chr7_-_44816586_44816658	0.239197	Foxc1	ENSMUST00000047356.8|Atf5|ENSMUSG00000038539.8|activating transcription factor 5
mm10_v2_chr7_-_44892358_44892429	0.233974	Foxc1	ENSMUST00000003049.6|Med25|ENSMUSG00000002968.7|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)
mm10_v2_chr15_+_88819584_88819684	0.22692	Foxc1	ENSMUST00000024042.3|Creld2|ENSMUSG00000023272.3|cysteine-rich with EGF-like domains 2
mm10_v2_chr10_-_14705459_14705560	0.218582	Foxc1	ENSMUST00000149485.1|Vta1|ENSMUSG00000019868.10|Vps20-associated 1 homolog (S. cerevisiae) 	ENSMUST00000154132.1|Vta1|ENSMUSG00000019868.10|Vps20-associated 1 homolog (S. cerevisiae)
mm10_v2_chr6_-_99096196_99096240	0.217614	Foxc1	ENSMUST00000175886.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr2_-_181365306_181365404	0.211552	Foxc1	ENSMUST00000108808.1|Arfrp1|ENSMUSG00000038671.9|ADP-ribosylation factor related protein 1 	ENSMUST00000170190.1|Arfrp1|ENSMUSG00000038671.9|ADP-ribosylation factor related protein 1 	ENSMUST00000127988.1|Arfrp1|ENSMUSG00000038671.9|ADP-ribosylation factor related protein 1
mm10_v2_chr7_+_44816364_44816375	0.211056	Foxc1	ENSMUST00000118125.1|Il4i1|ENSMUSG00000074141.6|interleukin 4 induced 1
mm10_v2_chr16_+_18248866_18248919	0.201399	Foxc1	ENSMUST00000115640.1|Trmt2a|ENSMUSG00000022721.12|TRM2 tRNA methyltransferase 2A 	ENSMUST00000140206.1|Trmt2a|ENSMUSG00000022721.12|TRM2 tRNA methyltransferase 2A
mm10_v2_chr17_-_57011271_57011326	0.200903	Foxc1	ENSMUST00000002733.6|Gtf2f1|ENSMUSG00000002658.9|general transcription factor IIF, polypeptide 1
mm10_v2_chrX_-_101222426_101222563	0.195709	Foxc1	ENSMUST00000120389.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000156473.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000077876.3|Snx12|ENSMUSG00000046032.10|sorting nexin 12
mm10_v2_chr8_-_41417042_41417135	0.187752	Foxc1	ENSMUST00000033999.6|Frg1|ENSMUSG00000031590.7|FSHD region gene 1
mm10_v2_chr11_-_45944910_45944960	0.178217	Foxc1	ENSMUST00000129820.1|Lsm11|ENSMUSG00000044847.7|U7 snRNP-specific Sm-like protein LSM11
mm10_v2_chr5_-_149636164_149636190	0.176317	Foxc1	ENSMUST00000076410.4|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr8_+_69088646_69088744	0.174512	Foxc1	ENSMUST00000006435.7|Atp6v1b2|ENSMUSG00000006273.8|ATPase, H+ transporting, lysosomal V1 subunit B2
mm10_v2_chr12_+_4234023_4234066	0.174003	Foxc1	ENSMUST00000179139.1|Ptrhd1|ENSMUSG00000096199.1|peptidyl-tRNA hydrolase domain containing 1
mm10_v2_chrX_-_102252154_102252181	0.17264	Foxc1	ENSMUST00000050551.3|Cited1|ENSMUSG00000051159.10|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
mm10_v2_chr15_+_80623499_80623549	0.171023	Foxc1	ENSMUST00000043149.7|Grap2|ENSMUSG00000042351.8|GRB2-related adaptor protein 2
mm10_v2_chr3_+_154597197_154597202	0.164639	Foxc1	ENSMUST00000155385.1|Cryz|ENSMUSG00000028199.12|crystallin, zeta 	ENSMUST00000029850.8|Cryz|ENSMUSG00000028199.12|crystallin, zeta
mm10_v2_chr17_-_45686214_45686265	0.151019	Foxc1	ENSMUST00000113523.2|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr9_-_71592265_71592297	0.150158	Foxc1	ENSMUST00000166843.1|Gcom1|ENSMUSG00000092137.1|GRINL1A complex locus 	ENSMUST00000163998.1|Gcom1|ENSMUSG00000092137.1|GRINL1A complex locus 	ENSMUST00000169573.1|Myzap|ENSMUSG00000041361.7|myocardial zonula adherens protein
mm10_v2_chr9_+_38718263_38718277	0.144037	Foxc1	ENSMUST00000001544.5|Vwa5a|ENSMUSG00000023186.8|von Willebrand factor A domain containing 5A 	ENSMUST00000118144.1|Vwa5a|ENSMUSG00000023186.8|von Willebrand factor A domain containing 5A
mm10_v2_chr16_+_18248961_18249062	0.140115	Foxc1	ENSMUST00000100099.3|Trmt2a|ENSMUSG00000022721.12|TRM2 tRNA methyltransferase 2A
mm10_v2_chr16_-_94370450_94370553	0.140027	Foxc1	ENSMUST00000138514.1|Pigp|ENSMUSG00000022940.10|phosphatidylinositol glycan anchor biosynthesis, class P
mm10_v2_chr4_+_40948401_40948412	0.139295	Foxc1	ENSMUST00000030128.5|Chmp5|ENSMUSG00000028419.5|charged multivesicular body protein 5
mm10_v2_chr5_-_139484420_139484473	0.137226	Foxc1	ENSMUST00000150992.1|Zfand2a|ENSMUSG00000053581.7|zinc finger, AN1-type domain 2A
mm10_v2_chr10_+_115569986_115570035	0.136657	Foxc1	ENSMUST00000173620.1|A930009A15Rik|ENSMUSG00000092210.1|RIKEN cDNA A930009A15 gene
mm10_v2_chr11_+_101082565_101082642	0.133893	Foxc1	ENSMUST00000001806.3|Coasy|ENSMUSG00000001755.6|Coenzyme A synthase 	ENSMUST00000107308.3|Coasy|ENSMUSG00000001755.6|Coenzyme A synthase
mm10_v2_chr9_-_67049143_67049406	0.132358	Foxc1	ENSMUST00000113687.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000113693.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000113701.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000034928.5|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000113685.3|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000030185.4|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000050905.9|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000113705.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000113697.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000113707.2|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr4_+_100478806_100478872	0.130686	Foxc1	ENSMUST00000133493.2|Ube2u|ENSMUSG00000069733.5|ubiquitin-conjugating enzyme E2U (putative) 	ENSMUST00000092730.3|Ube2u|ENSMUSG00000069733.5|ubiquitin-conjugating enzyme E2U (putative) 	ENSMUST00000106979.3|Ube2u|ENSMUSG00000069733.5|ubiquitin-conjugating enzyme E2U (putative)
mm10_v2_chr16_+_20674111_20674274	0.127327	Foxc1	ENSMUST00000151679.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1
mm10_v2_chr15_-_78405824_78405917	0.125197	Foxc1	ENSMUST00000058659.7|Tst|ENSMUSG00000044986.8|thiosulfate sulfurtransferase, mitochondrial
mm10_v2_chr5_-_77115145_77115156	0.122368	Foxc1	ENSMUST00000081964.5|Hopx|ENSMUSG00000059325.8|HOP homeobox
mm10_v2_chr4_-_59783800_59783876	0.118547	Foxc1	ENSMUST00000107526.1|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein 	ENSMUST00000095063.4|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein
mm10_v2_chr2_-_172370506_172370540	0.117487	Foxc1	ENSMUST00000109139.1|Aurka|ENSMUSG00000027496.9|aurora kinase A 	ENSMUST00000028997.7|Aurka|ENSMUSG00000027496.9|aurora kinase A 	ENSMUST00000109140.3|Aurka|ENSMUSG00000027496.9|aurora kinase A
mm10_v2_chr11_-_96829959_96829972	0.115994	Foxc1	ENSMUST00000081775.5|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1
mm10_v2_chr1_-_131097535_131097576	0.115045	Foxc1	ENSMUST00000016672.4|Mapkapk2|ENSMUSG00000016528.4|MAP kinase-activated protein kinase 2
mm10_v2_chr13_+_23934434_23934462	0.113941	Foxc1	ENSMUST00000072391.1|Hist1h2aa|ENSMUSG00000060081.1|histone cluster 1, H2aa
mm10_v2_chr13_+_65512678_65512678	0.103295	Foxc1	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr17_+_55959146_55959187	0.0984903	Foxc1	ENSMUST00000086869.4|Ccdc94|ENSMUSG00000003208.8|coiled-coil domain containing 94
mm10_v2_chr17_-_83631892_83631934	0.0975336	Foxc1	ENSMUST00000051482.1|Kcng3|ENSMUSG00000045053.1|potassium voltage-gated channel, subfamily G, member 3
mm10_v2_chr2_-_26140468_26140530	0.0884964	Foxc1	ENSMUST00000133808.1|C330006A16Rik|ENSMUSG00000087679.2|RIKEN cDNA C330006A16 gene
mm10_v2_chr5_+_98854434_98854466	0.0864697	Foxc1	ENSMUST00000031278.4|Bmp3|ENSMUSG00000029335.4|bone morphogenetic protein 3
mm10_v2_chr17_-_45686120_45686185	0.0705877	Foxc1	ENSMUST00000143907.1|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b 	ENSMUST00000127065.1|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr18_+_53245618_53245662	0.0676118	Foxc1	ENSMUST00000165032.1|Snx24|ENSMUSG00000024535.9|sorting nexing 24
mm10_v2_chr11_+_68968107_68968175	0.067511	Foxc1	ENSMUST00000102606.3|Slc25a35|ENSMUSG00000018740.8|solute carrier family 25, member 35 	ENSMUST00000018884.5|Slc25a35|ENSMUSG00000018740.8|solute carrier family 25, member 35
mm10_v2_chr6_-_55175019_55175043	0.0638347	Foxc1	ENSMUST00000003569.5|Inmt|ENSMUSG00000003477.5|indolethylamine N-methyltransferase
mm10_v2_chr7_+_83584910_83585092	0.0590759	Foxc1	ENSMUST00000039317.7|Tmc3|ENSMUSG00000038540.8|transmembrane channel-like gene family 3 	ENSMUST00000164944.1|Tmc3|ENSMUSG00000038540.8|transmembrane channel-like gene family 3
mm10_v2_chr11_+_85353156_85353219	0.0565048	Foxc1	ENSMUST00000108061.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108062.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000108056.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000138423.1|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000074875.4|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3 	ENSMUST00000092821.3|Bcas3|ENSMUSG00000059439.9|breast carcinoma amplified sequence 3
mm10_v2_chr2_-_155514796_155514860	0.0545501	Foxc1	ENSMUST00000029131.4|Ggt7|ENSMUSG00000027603.9|gamma-glutamyltransferase 7
mm10_v2_chr11_+_3202612_3202663	0.047555	Foxc1	ENSMUST00000110049.1|Eif4enif1|ENSMUSG00000020454.11|eukaryotic translation initiation factor 4E nuclear import factor 1
mm10_v2_chr1_+_189728264_189728326	0.0386769	Foxc1	ENSMUST00000097442.2|Ptpn14|ENSMUSG00000026604.11|protein tyrosine phosphatase, non-receptor type 14
mm10_v2_chr2_+_35622010_35622063	0.0291848	Foxc1	ENSMUST00000091010.5|Dab2ip|ENSMUSG00000026883.11|disabled 2 interacting protein
mm10_v2_chr15_+_79108911_79108982	0.0290517	Foxc1	ENSMUST00000040320.8|Micall1|ENSMUSG00000033039.9|microtubule associated monooxygenase, calponin and LIM domain containing -like 1
mm10_v2_chrX_-_57338598_57338729	0.0194408	Foxc1	ENSMUST00000033468.4|Arhgef6|ENSMUSG00000031133.6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 	ENSMUST00000114736.1|Arhgef6|ENSMUSG00000031133.6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm10_v2_chr16_+_35983424_35983582	0.0151836	Foxc1	ENSMUST00000173555.1|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr14_+_31641051_31641082	0.0145667	Foxc1	ENSMUST00000090147.6|Btd|ENSMUSG00000021900.10|biotinidase
mm10_v2_chr9_-_83146601_83146614	0.0142262	Foxc1	ENSMUST00000162246.2|Hmgn3|ENSMUSG00000066456.8|high mobility group nucleosomal binding domain 3 	ENSMUST00000161796.2|Hmgn3|ENSMUSG00000066456.8|high mobility group nucleosomal binding domain 3
mm10_v2_chr11_-_96829904_96829955	0.0132892	Foxc1	ENSMUST00000107657.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1
mm10_v2_chr12_-_87443800_87443850	0.0130952	Foxc1	ENSMUST00000162961.1|Alkbh1|ENSMUSG00000079036.4|alkB, alkylation repair homolog 1 (E. coli)
mm10_v2_chr10_-_14718191_14718228	0.00994926	Foxc1	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr9_-_110476637_110476694	0.00562117	Foxc1	ENSMUST00000111934.1|Klhl18|ENSMUSG00000054792.9|kelch-like 18 	ENSMUST00000068025.6|Klhl18|ENSMUSG00000054792.9|kelch-like 18
mm10_v2_chr1_+_163994866_163994904	0.00241797	Foxc1	ENSMUST00000111490.1|Mettl18|ENSMUSG00000041396.7|methyltransferase like 18 	ENSMUST00000045694.7|Mettl18|ENSMUSG00000041396.7|methyltransferase like 18
