mm10_v2_chr4_-_117178726_117178754	10.0449	Foxk1_Foxj1	ENSMUST00000153953.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C 	ENSMUST00000106436.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr10_-_130280218_130280242	7.25202	Foxk1_Foxj1	ENSMUST00000061571.3|Neurod4|ENSMUSG00000048015.3|neurogenic differentiation 4
mm10_v2_chr13_-_103920295_103920367	7.13789	Foxk1_Foxj1	ENSMUST00000169083.1|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein
mm10_v2_chr10_-_92165159_92165177	6.44797	Foxk1_Foxj1	ENSMUST00000182567.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000181604.2|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000181213.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr1_-_97977233_97977279	6.44654	Foxk1_Foxj1	ENSMUST00000161567.1|Pam|ENSMUSG00000026335.10|peptidylglycine alpha-amidating monooxygenase
mm10_v2_chr3_+_159495408_159495458	5.85282	Foxk1_Foxj1	ENSMUST00000120272.1|Depdc1a|ENSMUSG00000028175.9|DEP domain containing 1a 	ENSMUST00000029825.7|Depdc1a|ENSMUSG00000028175.9|DEP domain containing 1a 	ENSMUST00000106041.2|Depdc1a|ENSMUSG00000028175.9|DEP domain containing 1a
mm10_v2_chr3_-_100969644_100969676	5.28687	Foxk1_Foxj1	ENSMUST00000076941.5|Ttf2|ENSMUSG00000033222.10|transcription termination factor, RNA polymerase II
mm10_v2_chr11_+_119022962_119023104	5.26506	Foxk1_Foxj1	ENSMUST00000026662.7|Cbx2|ENSMUSG00000025577.7|chromobox 2
mm10_v2_chr14_-_62456286_62456289	5.01417	Foxk1_Foxj1	ENSMUST00000165651.1|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2 	ENSMUST00000022501.3|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2
mm10_v2_chr1_+_136467958_136467958	4.69696	Foxk1_Foxj1	ENSMUST00000047817.6|Kif14|ENSMUSG00000041498.7|kinesin family member 14
mm10_v2_chr5_+_30666886_30666963	4.61117	Foxk1_Foxj1	ENSMUST00000144742.1|Cenpa|ENSMUSG00000029177.3|centromere protein A
mm10_v2_chr4_-_43499608_43499695	4.22713	Foxk1_Foxj1	ENSMUST00000136005.1|Arhgef39|ENSMUSG00000051517.8|Rho guanine nucleotide exchange factor (GEF) 39 	ENSMUST00000054538.6|Arhgef39|ENSMUSG00000051517.8|Rho guanine nucleotide exchange factor (GEF) 39
mm10_v2_chr19_+_37376359_37376422	3.93203	Foxk1_Foxj1	ENSMUST00000012587.3|Kif11|ENSMUSG00000012443.3|kinesin family member 11
mm10_v2_chr15_+_57912199_57912278	3.84769	Foxk1_Foxj1	ENSMUST00000022992.6|Tbc1d31|ENSMUSG00000022364.8|TBC1 domain family, member 31
mm10_v2_chr16_-_36784784_36784825	3.82601	Foxk1_Foxj1	ENSMUST00000165531.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2
mm10_v2_chr19_+_53329413_53329478	3.73541	Foxk1_Foxj1	ENSMUST00000025998.7|Mxi1|ENSMUSG00000025025.7|Max interacting protein 1
mm10_v2_chr10_-_92164666_92164754	3.71255	Foxk1_Foxj1	ENSMUST00000183123.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000182033.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr9_-_100506844_100506856	3.47537	Foxk1_Foxj1	ENSMUST00000112874.3|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr14_+_46832127_46832151	3.46321	Foxk1_Foxj1	ENSMUST00000068532.8|Cgrrf1|ENSMUSG00000055128.8|cell growth regulator with ring finger domain 1
mm10_v2_chr10_+_127705170_127705170	3.33538	Foxk1_Foxj1	ENSMUST00000079590.5|Myo1a|ENSMUSG00000025401.8|myosin IA
mm10_v2_chr8_+_34807287_34807310	3.26158	Foxk1_Foxj1	ENSMUST00000033930.4|Dusp4|ENSMUSG00000031530.6|dual specificity phosphatase 4
mm10_v2_chr2_+_119047116_119047121	3.24403	Foxk1_Foxj1	ENSMUST00000152380.1|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5 	ENSMUST00000099542.2|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5
mm10_v2_chr12_-_31950170_31950197	3.21559	Foxk1_Foxj1	ENSMUST00000176520.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr12_-_31950210_31950246	3.17407	Foxk1_Foxj1	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr1_-_144177259_144177372	3.16838	Foxk1_Foxj1	ENSMUST00000111941.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13 	ENSMUST00000052375.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13
mm10_v2_chr18_-_62756275_62756347	3.13413	Foxk1_Foxj1	ENSMUST00000067450.1|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene 	ENSMUST00000048109.5|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene
mm10_v2_chr8_-_53638945_53639065	3.10913	Foxk1_Foxj1	ENSMUST00000047768.4|Neil3|ENSMUSG00000039396.4|nei like 3 (E. coli)
mm10_v2_chrX_+_9885622_9885622	3.10315	Foxk1_Foxj1	ENSMUST00000067529.2|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5 	ENSMUST00000086165.3|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5
mm10_v2_chr16_-_36784924_36784971	3.08973	Foxk1_Foxj1	ENSMUST00000168279.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2 	ENSMUST00000164579.1|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2 	ENSMUST00000023616.2|Slc15a2|ENSMUSG00000022899.2|solute carrier family 15 (H+/peptide transporter), member 2
mm10_v2_chr10_+_73821857_73821883	3.07602	Foxk1_Foxj1	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr2_+_119047129_119047159	2.82582	Foxk1_Foxj1	ENSMUST00000153300.1|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5 	ENSMUST00000028799.5|Casc5|ENSMUSG00000027326.7|cancer susceptibility candidate 5
mm10_v2_chr5_+_92809372_92809436	2.78711	Foxk1_Foxj1	ENSMUST00000113054.2|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr12_+_71016658_71016708	2.73658	Foxk1_Foxj1	ENSMUST00000125125.1|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr1_-_139377041_139377078	2.69794	Foxk1_Foxj1	ENSMUST00000059825.5|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chr14_-_62454793_62454793	2.68733	Foxk1_Foxj1	ENSMUST00000128573.1|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2
mm10_v2_chr14_+_73237891_73238007	2.57202	Foxk1_Foxj1	ENSMUST00000044405.6|Lpar6|ENSMUSG00000033446.6|lysophosphatidic acid receptor 6
mm10_v2_chr3_+_131110350_131110471	2.52949	Foxk1_Foxj1	ENSMUST00000066849.6|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1 	ENSMUST00000106341.2|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1 	ENSMUST00000029611.7|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1
mm10_v2_chr5_-_44099220_44099237	2.49421	Foxk1_Foxj1	ENSMUST00000165909.1|Prom1|ENSMUSG00000029086.9|prominin 1
mm10_v2_chr11_-_101466222_101466237	2.43416	Foxk1_Foxj1	ENSMUST00000040430.7|Vat1|ENSMUSG00000034993.7|vesicle amine transport protein 1 homolog (T californica)
mm10_v2_chr15_+_25752860_25752979	2.34813	Foxk1_Foxj1	ENSMUST00000022882.5|Myo10|ENSMUSG00000022272.11|myosin X 	ENSMUST00000135173.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr11_-_34833631_34833663	2.3215	Foxk1_Foxj1	ENSMUST00000093191.2|Spdl1|ENSMUSG00000069910.2|spindle apparatus coiled-coil protein 1
mm10_v2_chr1_-_156034800_156034817	2.30919	Foxk1_Foxj1	ENSMUST00000169241.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr2_+_38511643_38511814	2.28745	Foxk1_Foxj1	ENSMUST00000054234.3|Nek6|ENSMUSG00000026749.5|NIMA (never in mitosis gene a)-related expressed kinase 6 	ENSMUST00000112902.1|Nek6|ENSMUSG00000026749.5|NIMA (never in mitosis gene a)-related expressed kinase 6 	ENSMUST00000112895.1|Nek6|ENSMUSG00000026749.5|NIMA (never in mitosis gene a)-related expressed kinase 6
mm10_v2_chr14_-_57826128_57826180	2.26981	Foxk1_Foxj1	ENSMUST00000022536.2|Ska3|ENSMUSG00000021965.2|spindle and kinetochore associated complex subunit 3
mm10_v2_chr15_+_102459028_102459183	2.2117	Foxk1_Foxj1	ENSMUST00000164938.1|Prr13|ENSMUSG00000023048.7|proline rich 13 	ENSMUST00000023810.5|Prr13|ENSMUSG00000023048.7|proline rich 13
mm10_v2_chr11_-_86993682_86993707	2.01806	Foxk1_Foxj1	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chr2_+_177508570_177508570	1.94013	Foxk1_Foxj1	ENSMUST00000108940.2|Gm14403|ENSMUSG00000094786.1|predicted gene 14403
mm10_v2_chr12_-_31950535_31950560	1.93881	Foxk1_Foxj1	ENSMUST00000172314.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr14_+_47472628_47472640	1.91352	Foxk1_Foxj1	ENSMUST00000095941.2|Fbxo34|ENSMUSG00000037536.7|F-box protein 34
mm10_v2_chr8_+_4678446_4678486	1.90874	Foxk1_Foxj1	ENSMUST00000181337.1|Gm6410|ENSMUSG00000097308.1|predicted gene 6410
mm10_v2_chr8_-_110902442_110902467	1.90365	Foxk1_Foxj1	ENSMUST00000041382.6|Fuk|ENSMUSG00000033703.8|fucokinase
mm10_v2_chr14_+_32028989_32029044	1.89538	Foxk1_Foxj1	ENSMUST00000022460.4|Galnt15|ENSMUSG00000021903.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15
mm10_v2_chr1_-_156034826_156034880	1.87786	Foxk1_Foxj1	ENSMUST00000141878.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1 	ENSMUST00000123705.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr10_-_13324160_13324242	1.84715	Foxk1_Foxj1	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr8_-_61902669_61902713	1.81447	Foxk1_Foxj1	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr2_+_143915273_143915337	1.79666	Foxk1_Foxj1	ENSMUST00000103172.3|Dstn|ENSMUSG00000015932.8|destrin
mm10_v2_chr7_-_52005792_52006018	1.78497	Foxk1_Foxj1	ENSMUST00000098414.3|Svip|ENSMUSG00000074093.3|small VCP/p97-interacting protein
mm10_v2_chr3_-_106167564_106167564	1.78324	Foxk1_Foxj1	ENSMUST00000063062.8|Chi3l3|ENSMUSG00000040809.10|chitinase 3-like 3
mm10_v2_chr4_-_55532453_55532485	1.78305	Foxk1_Foxj1	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chr4_+_11704439_11704457	1.7498	Foxk1_Foxj1	ENSMUST00000108304.2|Gem|ENSMUSG00000028214.7|GTP binding protein (gene overexpressed in skeletal muscle)
mm10_v2_chr19_+_5406815_5406880	1.71744	Foxk1_Foxj1	ENSMUST00000174412.1|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene 	ENSMUST00000153017.2|4930481A15Rik|ENSMUSG00000086938.2|RIKEN cDNA 4930481A15 gene
mm10_v2_chr18_+_34759551_34759558	1.71584	Foxk1_Foxj1	ENSMUST00000097622.3|Fam53c|ENSMUSG00000034300.10|family with sequence similarity 53, member C
mm10_v2_chr1_-_139377094_139377110	1.69743	Foxk1_Foxj1	ENSMUST00000131586.1|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila) 	ENSMUST00000145244.1|Crb1|ENSMUSG00000063681.8|crumbs homolog 1 (Drosophila)
mm10_v2_chrX_-_166510424_166510478	1.69738	Foxk1_Foxj1	ENSMUST00000112188.1|Tceanc|ENSMUSG00000051224.7|transcription elongation factor A (SII) N-terminal and central domain containing
mm10_v2_chr15_+_102459193_102459232	1.69072	Foxk1_Foxj1	ENSMUST00000164957.1|Prr13|ENSMUSG00000023048.7|proline rich 13 	ENSMUST00000171245.1|Prr13|ENSMUSG00000023048.7|proline rich 13
mm10_v2_chr9_+_118506226_118506318	1.67404	Foxk1_Foxj1	ENSMUST00000084820.4|Golga4|ENSMUSG00000038708.9|golgi autoantigen, golgin subfamily a, 4
mm10_v2_chr9_-_105521147_105521265	1.67336	Foxk1_Foxj1	ENSMUST00000176770.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000085133.6|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr10_-_128180265_128180307	1.66385	Foxk1_Foxj1	ENSMUST00000099139.1|Rbms2|ENSMUSG00000040043.9|RNA binding motif, single stranded interacting protein 2
mm10_v2_chr4_-_34882919_34882964	1.66049	Foxk1_Foxj1	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr6_-_6217023_6217125	1.65387	Foxk1_Foxj1	ENSMUST00000015256.8|Slc25a13|ENSMUSG00000015112.9|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm10_v2_chr2_+_102706356_102706438	1.62668	Foxk1_Foxj1	ENSMUST00000123759.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000111212.1|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENSMUST00000005220.4|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr15_-_3995708_3995760	1.58351	Foxk1_Foxj1	ENSMUST00000046633.8|AW549877|ENSMUSG00000041935.9|expressed sequence AW549877
mm10_v2_chr12_-_84617326_84617466	1.57896	Foxk1_Foxj1	ENSMUST00000021666.4|Abcd4|ENSMUSG00000021240.5|ATP-binding cassette, sub-family D (ALD), member 4
mm10_v2_chr6_-_71144338_71144356	1.55875	Foxk1_Foxj1	ENSMUST00000074241.7|Thnsl2|ENSMUSG00000054474.9|threonine synthase-like 2 (bacterial) 	ENSMUST00000160918.1|Thnsl2|ENSMUSG00000054474.9|threonine synthase-like 2 (bacterial)
mm10_v2_chrM_-_14060_14074	1.55378	Foxk1_Foxj1	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr13_-_83729544_83729584	1.5108	Foxk1_Foxj1	ENSMUST00000181705.1|Gm26803|ENSMUSG00000097265.1|predicted gene, 26803
mm10_v2_chr5_+_150522599_150522637	1.50633	Foxk1_Foxj1	ENSMUST00000044620.7|Brca2|ENSMUSG00000041147.7|breast cancer 2
mm10_v2_chr16_+_42907563_42907684	1.49751	Foxk1_Foxj1	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr4_+_11558914_11558979	1.48177	Foxk1_Foxj1	ENSMUST00000178703.1|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae) 	ENSMUST00000095145.5|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae) 	ENSMUST00000108306.2|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae) 	ENSMUST00000070755.6|Rad54b|ENSMUSG00000078773.5|RAD54 homolog B (S. cerevisiae)
mm10_v2_chr14_+_30879257_30879327	1.48172	Foxk1_Foxj1	ENSMUST00000040715.6|Mustn1|ENSMUSG00000042485.6|musculoskeletal, embryonic nuclear protein 1
mm10_v2_chr18_+_60293372_60293387	1.47116	Foxk1_Foxj1	ENSMUST00000171297.1|F830016B08Rik|ENSMUSG00000090942.1|RIKEN cDNA F830016B08 gene
mm10_v2_chr4_-_108833544_108833597	1.4467	Foxk1_Foxj1	ENSMUST00000102740.1|Btf3l4|ENSMUSG00000028568.10|basic transcription factor 3-like 4 	ENSMUST00000102741.1|Btf3l4|ENSMUSG00000028568.10|basic transcription factor 3-like 4
mm10_v2_chr19_-_58455161_58455324	1.44132	Foxk1_Foxj1	ENSMUST00000135730.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1 	ENSMUST00000152507.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr5_+_48242549_48242549	1.42803	Foxk1_Foxj1	ENSMUST00000172493.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila)
mm10_v2_chr18_+_67800101_67800147	1.42785	Foxk1_Foxj1	ENSMUST00000025425.5|Cep192|ENSMUSG00000024542.8|centrosomal protein 192
mm10_v2_chr2_+_73312601_73312665	1.41257	Foxk1_Foxj1	ENSMUST00000090811.4|Scrn3|ENSMUSG00000008226.8|secernin 3 	ENSMUST00000112050.1|Scrn3|ENSMUSG00000008226.8|secernin 3
mm10_v2_chr10_-_14718191_14718228	1.41128	Foxk1_Foxj1	ENSMUST00000020016.4|Gje1|ENSMUSG00000019867.4|gap junction protein, epsilon 1
mm10_v2_chr12_+_71136848_71136848	1.40429	Foxk1_Foxj1	ENSMUST00000149564.1|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene 	ENSMUST00000045907.8|2700049A03Rik|ENSMUSG00000034601.10|RIKEN cDNA 2700049A03 gene
mm10_v2_chr14_+_47472547_47472625	1.404	Foxk1_Foxj1	ENSMUST00000168833.1|Fbxo34|ENSMUSG00000037536.7|F-box protein 34 	ENSMUST00000163324.1|Fbxo34|ENSMUSG00000037536.7|F-box protein 34 	ENSMUST00000043112.7|Fbxo34|ENSMUSG00000037536.7|F-box protein 34
mm10_v2_chr1_-_75046639_75046639	1.37914	Foxk1_Foxj1	ENSMUST00000152855.1|Nhej1|ENSMUSG00000026162.6|nonhomologous end-joining factor 1
mm10_v2_chr17_+_34263209_34263256	1.37874	Foxk1_Foxj1	ENSMUST00000040828.5|H2-Ab1|ENSMUSG00000073421.5|histocompatibility 2, class II antigen A, beta 1
mm10_v2_chr10_+_88091070_88091076	1.37658	Foxk1_Foxj1	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr10_+_93488766_93488774	1.36632	Foxk1_Foxj1	ENSMUST00000129421.1|Hal|ENSMUSG00000020017.8|histidine ammonia lyase
mm10_v2_chr7_+_31059342_31059382	1.36555	Foxk1_Foxj1	ENSMUST00000039775.7|Lgi4|ENSMUSG00000036560.8|leucine-rich repeat LGI family, member 4
mm10_v2_chr12_-_3357012_3357153	1.35823	Foxk1_Foxj1	ENSMUST00000180719.1|Gm26520|ENSMUSG00000097429.1|predicted gene, 26520
mm10_v2_chr10_+_18469958_18469981	1.35803	Foxk1_Foxj1	ENSMUST00000162891.1|Nhsl1|ENSMUSG00000039835.9|NHS-like 1 	ENSMUST00000100054.3|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr17_+_78491549_78491565	1.34155	Foxk1_Foxj1	ENSMUST00000079363.4|Gm10093|ENSMUSG00000061062.4|predicted pseudogene 10093
mm10_v2_chr3_+_5218516_5218544	1.33364	Foxk1_Foxj1	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr7_+_80186835_80186904	1.32967	Foxk1_Foxj1	ENSMUST00000107383.1|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 	ENSMUST00000032754.7|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm10_v2_chr4_+_11191354_11191424	1.3156	Foxk1_Foxj1	ENSMUST00000170901.1|Ccne2|ENSMUSG00000028212.10|cyclin E2
mm10_v2_chr2_-_91255995_91256047	1.30328	Foxk1_Foxj1	ENSMUST00000180732.1|Gm17281|ENSMUSG00000097317.1|predicted gene, 17281
mm10_v2_chr7_-_102100227_102100258	1.29539	Foxk1_Foxj1	ENSMUST00000106937.1|Art5|ENSMUSG00000070424.5|ADP-ribosyltransferase 5
mm10_v2_chr10_+_127677064_127677099	1.28872	Foxk1_Foxj1	ENSMUST00000118612.1|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194 	ENSMUST00000048099.4|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194
mm10_v2_chr14_+_120275669_120275714	1.27532	Foxk1_Foxj1	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr2_-_170194033_170194064	1.2726	Foxk1_Foxj1	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr19_-_58455903_58455914	1.27108	Foxk1_Foxj1	ENSMUST00000131877.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr9_-_60511003_60511035	1.26177	Foxk1_Foxj1	ENSMUST00000098660.3|Thsd4|ENSMUSG00000032289.9|thrombospondin, type I, domain containing 4
mm10_v2_chr9_+_53850243_53850257	1.25843	Foxk1_Foxj1	ENSMUST00000048485.5|Sln|ENSMUSG00000042045.5|sarcolipin
mm10_v2_chrX_+_139217166_139217190	1.22286	Foxk1_Foxj1	ENSMUST00000166444.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000170671.1|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113041.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1 	ENSMUST00000113042.2|Mum1l1|ENSMUSG00000042515.7|melanoma associated antigen (mutated) 1-like 1
mm10_v2_chr14_-_8318023_8318054	1.19956	Foxk1_Foxj1	ENSMUST00000120411.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A
mm10_v2_chr1_-_58504946_58505109	1.18687	Foxk1_Foxj1	ENSMUST00000027198.5|Orc2|ENSMUSG00000026037.8|origin recognition complex, subunit 2
mm10_v2_chr16_+_44943737_44943752	1.17269	Foxk1_Foxj1	ENSMUST00000114622.3|Cd200r3|ENSMUSG00000036172.11|CD200 receptor 3 	ENSMUST00000166731.1|Cd200r3|ENSMUSG00000036172.11|CD200 receptor 3
mm10_v2_chr6_+_42264983_42265032	1.16608	Foxk1_Foxj1	ENSMUST00000031895.6|Casp2|ENSMUSG00000029863.7|caspase 2
mm10_v2_chr10_+_37139558_37139558	1.16387	Foxk1_Foxj1	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr11_+_46235460_46235531	1.15507	Foxk1_Foxj1	ENSMUST00000060185.2|Fndc9|ENSMUSG00000048721.2|fibronectin type III domain containing 9
mm10_v2_chr9_+_96258697_96258711	1.14359	Foxk1_Foxj1	ENSMUST00000179416.1|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr2_+_61578549_61578617	1.14305	Foxk1_Foxj1	ENSMUST00000112502.1|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator 	ENSMUST00000078074.2|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator
mm10_v2_chr5_+_121220191_121220243	1.12982	Foxk1_Foxj1	ENSMUST00000119892.2|Gm15800|ENSMUSG00000042744.10|predicted gene 15800 	ENSMUST00000042614.6|Gm15800|ENSMUSG00000042744.10|predicted gene 15800
mm10_v2_chr2_+_79635416_79635441	1.12728	Foxk1_Foxj1	ENSMUST00000111788.1|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr4_-_154097105_154097173	1.12258	Foxk1_Foxj1	ENSMUST00000105643.1|Trp73|ENSMUSG00000029026.10|transformation related protein 73 	ENSMUST00000133533.1|Trp73|ENSMUSG00000029026.10|transformation related protein 73 	ENSMUST00000097762.4|Trp73|ENSMUSG00000029026.10|transformation related protein 73
mm10_v2_chr15_+_85510812_85510812	1.12258	Foxk1_Foxj1	ENSMUST00000079690.2|Gm4825|ENSMUSG00000063548.2|predicted pseudogene 4825
mm10_v2_chr12_-_84400851_84400900	1.10738	Foxk1_Foxj1	ENSMUST00000117286.1|Entpd5|ENSMUSG00000021236.10|ectonucleoside triphosphate diphosphohydrolase 5
mm10_v2_chr1_+_153749414_153749442	1.09742	Foxk1_Foxj1	ENSMUST00000086209.3|Rnasel|ENSMUSG00000066800.5|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm10_v2_chr16_-_59553970_59553970	1.09105	Foxk1_Foxj1	ENSMUST00000139989.1|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3
mm10_v2_chr3_-_103791537_103791563	1.07649	Foxk1_Foxj1	ENSMUST00000118317.1|Hipk1|ENSMUSG00000008730.11|homeodomain interacting protein kinase 1
mm10_v2_chr4_-_82885148_82885148	1.07382	Foxk1_Foxj1	ENSMUST00000048430.3|Cer1|ENSMUSG00000038192.5|cerberus 1 homolog (Xenopus laevis)
mm10_v2_chr12_-_84400929_84400946	1.07286	Foxk1_Foxj1	ENSMUST00000122194.1|Entpd5|ENSMUSG00000021236.10|ectonucleoside triphosphate diphosphohydrolase 5
mm10_v2_chr17_+_47649621_47649621	1.04758	Foxk1_Foxj1	ENSMUST00000145314.1|Usp49|ENSMUSG00000090115.1|ubiquitin specific peptidase 49
mm10_v2_chr10_+_25408346_25408395	1.02385	Foxk1_Foxj1	ENSMUST00000092645.6|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr10_+_11281304_11281357	1.02253	Foxk1_Foxj1	ENSMUST00000129456.1|Fbxo30|ENSMUSG00000047648.7|F-box protein 30
mm10_v2_chr8_+_94214567_94214608	1.00933	Foxk1_Foxj1	ENSMUST00000079961.6|Nup93|ENSMUSG00000032939.7|nucleoporin 93
mm10_v2_chr13_-_64129305_64129348	1.0027	Foxk1_Foxj1	ENSMUST00000099441.4|Slc35d2|ENSMUSG00000033114.10|solute carrier family 35, member D2
mm10_v2_chr2_+_136052180_136052239	0.995911	Foxk1_Foxj1	ENSMUST00000144403.1|Lamp5|ENSMUSG00000027270.8|lysosomal-associated membrane protein family, member 5
mm10_v2_chr3_-_146495115_146495139	0.988988	Foxk1_Foxj1	ENSMUST00000093951.2|Spata1|ENSMUSG00000028188.7|spermatogenesis associated 1
mm10_v2_chr7_+_64287665_64287676	0.982007	Foxk1_Foxj1	ENSMUST00000032736.4|Mtmr10|ENSMUSG00000030522.8|myotubularin related protein 10
mm10_v2_chr5_+_110330697_110330767	0.96965	Foxk1_Foxj1	ENSMUST00000112481.1|Pole|ENSMUSG00000007080.8|polymerase (DNA directed), epsilon
mm10_v2_chrX_-_10117597_10117709	0.961573	Foxk1_Foxj1	ENSMUST00000115543.2|Srpx|ENSMUSG00000090084.1|sushi-repeat-containing protein 	ENSMUST00000044789.3|Srpx|ENSMUSG00000090084.1|sushi-repeat-containing protein 	ENSMUST00000115544.2|Srpx|ENSMUSG00000090084.1|sushi-repeat-containing protein
mm10_v2_chr1_-_119913162_119913208	0.952761	Foxk1_Foxj1	ENSMUST00000037906.5|Tmem177|ENSMUSG00000036975.5|transmembrane protein 177
mm10_v2_chr11_+_114851142_114851173	0.95204	Foxk1_Foxj1	ENSMUST00000133245.1|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C 	ENSMUST00000122967.2|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C
mm10_v2_chr9_+_114731177_114731234	0.943153	Foxk1_Foxj1	ENSMUST00000035007.8|Cmtm6|ENSMUSG00000032434.8|CKLF-like MARVEL transmembrane domain containing 6
mm10_v2_chr6_-_48708206_48708252	0.938822	Foxk1_Foxj1	ENSMUST00000119315.1|Gimap6|ENSMUSG00000047867.5|GTPase, IMAP family member 6 	ENSMUST00000053661.4|Gimap6|ENSMUSG00000047867.5|GTPase, IMAP family member 6
mm10_v2_chr9_-_65908676_65908798	0.93672	Foxk1_Foxj1	ENSMUST00000119245.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000134338.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000179395.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4
mm10_v2_chr3_+_67374091_67374102	0.925091	Foxk1_Foxj1	ENSMUST00000077916.5|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr3_-_10208569_10208586	0.924981	Foxk1_Foxj1	ENSMUST00000029041.4|Fabp4|ENSMUSG00000062515.2|fatty acid binding protein 4, adipocyte
mm10_v2_chr3_+_138374121_138374163	0.923939	Foxk1_Foxj1	ENSMUST00000171054.1|Adh6-ps1|ENSMUSG00000090306.1|alcohol dehydrogenase 6 (class V), pseudogene 1
mm10_v2_chr16_-_22161450_22161450	0.920345	Foxk1_Foxj1	ENSMUST00000115379.1|Igf2bp2|ENSMUSG00000033581.10|insulin-like growth factor 2 mRNA binding protein 2
mm10_v2_chr9_+_70678950_70679010	0.919418	Foxk1_Foxj1	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr8_+_68276567_68276705	0.915651	Foxk1_Foxj1	ENSMUST00000066594.3|Sh2d4a|ENSMUSG00000053886.3|SH2 domain containing 4A
mm10_v2_chr17_-_79896028_79896123	0.901776	Foxk1_Foxj1	ENSMUST00000068282.5|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2 	ENSMUST00000112437.1|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2
mm10_v2_chr2_+_91255954_91256105	0.900784	Foxk1_Foxj1	ENSMUST00000134699.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr1_+_20917856_20917874	0.899666	Foxk1_Foxj1	ENSMUST00000167119.1|Paqr8|ENSMUSG00000025931.9|progestin and adipoQ receptor family member VIII
mm10_v2_chr6_+_29361410_29361461	0.899192	Foxk1_Foxj1	ENSMUST00000156163.1|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr3_+_67374116_67374154	0.896583	Foxk1_Foxj1	ENSMUST00000061322.8|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr11_+_23665615_23665697	0.890098	Foxk1_Foxj1	ENSMUST00000109525.1|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10 	ENSMUST00000020520.4|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10
mm10_v2_chr4_-_82850721_82850814	0.889926	Foxk1_Foxj1	ENSMUST00000139401.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr11_-_107131922_107131954	0.887078	Foxk1_Foxj1	ENSMUST00000057892.8|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor
mm10_v2_chr6_-_120357342_120357400	0.883033	Foxk1_Foxj1	ENSMUST00000163827.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr16_+_15637844_15637889	0.876855	Foxk1_Foxj1	ENSMUST00000023352.8|Prkdc|ENSMUSG00000022672.8|protein kinase, DNA activated, catalytic polypeptide
mm10_v2_chr17_-_26095487_26095514	0.876106	Foxk1_Foxj1	ENSMUST00000025007.5|Nme4|ENSMUSG00000024177.8|NME/NM23 nucleoside diphosphate kinase 4
mm10_v2_chr10_+_115569986_115570035	0.872324	Foxk1_Foxj1	ENSMUST00000173620.1|A930009A15Rik|ENSMUSG00000092210.1|RIKEN cDNA A930009A15 gene
mm10_v2_chr19_-_34879452_34879465	0.848748	Foxk1_Foxj1	ENSMUST00000036584.5|Pank1|ENSMUSG00000033610.9|pantothenate kinase 1
mm10_v2_chr1_-_88008520_88008556	0.848227	Foxk1_Foxj1	ENSMUST00000040783.4|Usp40|ENSMUSG00000005501.8|ubiquitin specific peptidase 40
mm10_v2_chrX_+_7722267_7722362	0.845313	Foxk1_Foxj1	ENSMUST00000125991.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000148624.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45
mm10_v2_chr15_-_50882806_50882822	0.845301	Foxk1_Foxj1	ENSMUST00000184885.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr2_+_172248492_172248492	0.831101	Foxk1_Foxj1	ENSMUST00000038532.1|Mc3r|ENSMUSG00000038537.1|melanocortin 3 receptor
mm10_v2_chr10_-_127522428_127522454	0.827611	Foxk1_Foxj1	ENSMUST00000026470.4|Shmt2|ENSMUSG00000025403.4|serine hydroxymethyltransferase 2 (mitochondrial)
mm10_v2_chrX_+_142227923_142227951	0.825585	Foxk1_Foxj1	ENSMUST00000042329.5|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr14_-_24486994_24487064	0.824724	Foxk1_Foxj1	ENSMUST00000026322.7|Polr3a|ENSMUSG00000025280.7|polymerase (RNA) III (DNA directed) polypeptide A
mm10_v2_chr5_-_122697603_122697603	0.82426	Foxk1_Foxj1	ENSMUST00000071235.4|Gm10064|ENSMUSG00000059352.4|predicted gene 10064
mm10_v2_chr1_-_147281942_147281942	0.821251	Foxk1_Foxj1	ENSMUST00000066758.2|Gm9931|ENSMUSG00000053988.2|predicted gene 9931
mm10_v2_chr11_-_51756378_51756618	0.8135	Foxk1_Foxj1	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
mm10_v2_chr12_+_76072016_76072079	0.811858	Foxk1_Foxj1	ENSMUST00000131480.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chr2_+_32535315_32535359	0.809855	Foxk1_Foxj1	ENSMUST00000133512.1|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A 	ENSMUST00000048375.5|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A
mm10_v2_chr2_+_164486455_164486655	0.806851	Foxk1_Foxj1	ENSMUST00000069385.8|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2 	ENSMUST00000143690.1|Dbndd2|ENSMUSG00000017734.9|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm10_v2_chr1_-_120120138_120120194	0.806195	Foxk1_Foxj1	ENSMUST00000112648.1|Dbi|ENSMUSG00000026385.10|diazepam binding inhibitor 	ENSMUST00000128408.1|Dbi|ENSMUSG00000026385.10|diazepam binding inhibitor
mm10_v2_chr3_-_30793549_30793595	0.805998	Foxk1_Foxj1	ENSMUST00000180833.1|4933429H19Rik|ENSMUSG00000097786.1|RIKEN cDNA 4933429H19 gene
mm10_v2_chr2_-_181578906_181578952	0.802617	Foxk1_Foxj1	ENSMUST00000136875.1|Uckl1|ENSMUSG00000089917.1|uridine-cytidine kinase 1-like 1
mm10_v2_chr18_-_23981555_23981555	0.800253	Foxk1_Foxj1	ENSMUST00000115829.1|Zscan30|ENSMUSG00000024274.8|zinc finger and SCAN domain containing 30
mm10_v2_chr2_+_91256144_91256170	0.793846	Foxk1_Foxj1	ENSMUST00000154959.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3 	ENSMUST00000059566.4|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr14_-_105177263_105177277	0.789343	Foxk1_Foxj1	ENSMUST00000163499.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr2_-_104742802_104742878	0.787347	Foxk1_Foxj1	ENSMUST00000028595.7|Depdc7|ENSMUSG00000027173.7|DEP domain containing 7
mm10_v2_chr2_+_4718145_4718205	0.787188	Foxk1_Foxj1	ENSMUST00000056914.6|Bend7|ENSMUSG00000048186.8|BEN domain containing 7
mm10_v2_chr16_+_21891969_21891969	0.778772	Foxk1_Foxj1	ENSMUST00000042065.6|Map3k13|ENSMUSG00000033618.6|mitogen-activated protein kinase kinase kinase 13
mm10_v2_chr5_+_139423151_139423186	0.776652	Foxk1_Foxj1	ENSMUST00000066211.4|Gper1|ENSMUSG00000053647.4|G protein-coupled estrogen receptor 1
mm10_v2_chr13_+_4191163_4191200	0.764949	Foxk1_Foxj1	ENSMUST00000021634.2|Akr1c13|ENSMUSG00000021213.5|aldo-keto reductase family 1, member C13
mm10_v2_chr5_-_113989739_113989744	0.764928	Foxk1_Foxj1	ENSMUST00000077689.7|Ssh1|ENSMUSG00000042121.10|slingshot homolog 1 (Drosophila)
mm10_v2_chr10_-_5069044_5069079	0.762235	Foxk1_Foxj1	ENSMUST00000095899.3|Syne1|ENSMUSG00000019769.10|spectrin repeat containing, nuclear envelope 1
mm10_v2_chr4_+_154869585_154869636	0.754006	Foxk1_Foxj1	ENSMUST00000079269.7|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000163732.1|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1 	ENSMUST00000080559.6|Mmel1|ENSMUSG00000058183.8|membrane metallo-endopeptidase-like 1
mm10_v2_chr15_+_35371498_35371593	0.749928	Foxk1_Foxj1	ENSMUST00000048646.7|Vps13b|ENSMUSG00000037646.9|vacuolar protein sorting 13B (yeast)
mm10_v2_chr1_+_137966529_137966532	0.747979	Foxk1_Foxj1	ENSMUST00000182158.1|A430106G13Rik|ENSMUSG00000098206.1|RIKEN cDNA A430106G13 gene
mm10_v2_chr6_-_122609964_122610087	0.744405	Foxk1_Foxj1	ENSMUST00000032211.4|Gdf3|ENSMUSG00000030117.4|growth differentiation factor 3
mm10_v2_chr18_+_35598607_35598653	0.738911	Foxk1_Foxj1	ENSMUST00000041314.8|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115737.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115736.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115735.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2
mm10_v2_chr1_-_157256682_157256701	0.737576	Foxk1_Foxj1	ENSMUST00000134543.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr2_+_62664279_62664300	0.733344	Foxk1_Foxj1	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr14_-_105177280_105177334	0.731318	Foxk1_Foxj1	ENSMUST00000100327.3|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26 	ENSMUST00000022715.7|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr2_+_52038005_52038020	0.727656	Foxk1_Foxj1	ENSMUST00000065927.5|Tnfaip6|ENSMUSG00000053475.5|tumor necrosis factor alpha induced protein 6
mm10_v2_chr18_+_60376029_60376029	0.71681	Foxk1_Foxj1	ENSMUST00000066912.5|Iigp1|ENSMUSG00000054072.5|interferon inducible GTPase 1 	ENSMUST00000032473.6|Iigp1|ENSMUSG00000054072.5|interferon inducible GTPase 1
mm10_v2_chr2_+_27676440_27676454	0.716299	Foxk1_Foxj1	ENSMUST00000129514.1|Rxra|ENSMUSG00000015846.8|retinoid X receptor alpha
mm10_v2_chrX_-_10216918_10216921	0.715731	Foxk1_Foxj1	ENSMUST00000072393.2|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000044598.6|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000073392.4|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115533.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115532.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator
mm10_v2_chr2_-_106970391_106970407	0.71314	Foxk1_Foxj1	ENSMUST00000093883.3|Arl14ep|ENSMUSG00000027122.9|ADP-ribosylation factor-like 14 effector protein
mm10_v2_chr15_-_10470490_10470527	0.704419	Foxk1_Foxj1	ENSMUST00000136591.1|Dnajc21|ENSMUSG00000044224.10|DnaJ (Hsp40) homolog, subfamily C, member 21
mm10_v2_chr15_-_65014904_65014904	0.701635	Foxk1_Foxj1	ENSMUST00000110100.2|Gm21961|ENSMUSG00000079024.2|predicted gene, 21961
mm10_v2_chr2_-_151009364_151009398	0.697239	Foxk1_Foxj1	ENSMUST00000109896.1|Ninl|ENSMUSG00000068115.7|ninein-like
mm10_v2_chr4_-_87806296_87806325	0.696646	Foxk1_Foxj1	ENSMUST00000126353.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENSMUST00000149357.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr17_+_46496753_46496809	0.695754	Foxk1_Foxj1	ENSMUST00000046497.6|Dnph1|ENSMUSG00000040658.6|2'-deoxynucleoside 5'-phosphate N-hydrolase 1
mm10_v2_chr15_+_102460076_102460108	0.682678	Foxk1_Foxj1	ENSMUST00000164688.1|Prr13|ENSMUSG00000023048.7|proline rich 13
mm10_v2_chr13_+_35659856_35659870	0.682395	Foxk1_Foxj1	ENSMUST00000075220.6|Cdyl|ENSMUSG00000059288.7|chromodomain protein, Y chromosome-like
mm10_v2_chr3_+_32397671_32397671	0.681606	Foxk1_Foxj1	ENSMUST00000108243.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr4_-_44710408_44710418	0.678881	Foxk1_Foxj1	ENSMUST00000134968.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000173821.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000174319.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000173733.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000172866.1|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000165417.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000107825.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000102932.3|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000107827.2|Pax5|ENSMUSG00000014030.9|paired box gene 5 	ENSMUST00000107826.2|Pax5|ENSMUSG00000014030.9|paired box gene 5
mm10_v2_chr12_+_111971545_111971598	0.674941	Foxk1_Foxj1	ENSMUST00000079009.5|Tdrd9|ENSMUSG00000054003.8|tudor domain containing 9
mm10_v2_chr12_-_40134175_40134228	0.670361	Foxk1_Foxj1	ENSMUST00000078481.7|Scin|ENSMUSG00000002565.10|scinderin 	ENSMUST00000002640.5|Scin|ENSMUSG00000002565.10|scinderin
mm10_v2_chr3_-_54714353_54714353	0.667609	Foxk1_Foxj1	ENSMUST00000178832.1|Gm21958|ENSMUSG00000094487.1|predicted gene, 21958
mm10_v2_chr3_+_94398517_94398538	0.662122	Foxk1_Foxj1	ENSMUST00000050975.3|Lingo4|ENSMUSG00000044505.3|leucine rich repeat and Ig domain containing 4
mm10_v2_chr2_+_177768044_177768044	0.655395	Foxk1_Foxj1	ENSMUST00000108942.3|Gm14322|ENSMUSG00000078864.4|predicted gene 14322
mm10_v2_chr7_-_133123770_133123876	0.653998	Foxk1_Foxj1	ENSMUST00000164896.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000171968.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr4_-_25281752_25281800	0.649901	Foxk1_Foxj1	ENSMUST00000038705.7|Ufl1|ENSMUSG00000040359.8|UFM1 specific ligase 1
mm10_v2_chrX_-_75578188_75578247	0.64368	Foxk1_Foxj1	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr9_+_45055166_45055195	0.640095	Foxk1_Foxj1	ENSMUST00000114664.1|Mpzl3|ENSMUSG00000070305.4|myelin protein zero-like 3 	ENSMUST00000093856.3|Mpzl3|ENSMUSG00000070305.4|myelin protein zero-like 3
mm10_v2_chr15_+_100154379_100154411	0.624958	Foxk1_Foxj1	ENSMUST00000023768.6|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila) 	ENSMUST00000108971.2|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr12_-_82496537_82496537	0.623361	Foxk1_Foxj1	ENSMUST00000179295.1|Gm5435|ENSMUSG00000094374.1|predicted gene 5435
mm10_v2_chr11_-_79296906_79296906	0.621021	Foxk1_Foxj1	ENSMUST00000068448.2|Gm9964|ENSMUSG00000055072.2|predicted gene 9964
mm10_v2_chr10_+_17796256_17796339	0.614995	Foxk1_Foxj1	ENSMUST00000037964.6|Txlnb|ENSMUSG00000039891.6|taxilin beta
mm10_v2_chr14_+_52110939_52110953	0.613033	Foxk1_Foxj1	ENSMUST00000111600.4|Rpgrip1|ENSMUSG00000057132.9|retinitis pigmentosa GTPase regulator interacting protein 1
mm10_v2_chr3_+_94933041_94933073	0.608441	Foxk1_Foxj1	ENSMUST00000090839.5|Selenbp1|ENSMUSG00000068874.7|selenium binding protein 1
mm10_v2_chr4_-_87806276_87806294	0.604638	Foxk1_Foxj1	ENSMUST00000148059.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr10_+_21377290_21377347	0.601286	Foxk1_Foxj1	ENSMUST00000042699.7|Aldh8a1|ENSMUSG00000037542.7|aldehyde dehydrogenase 8 family, member A1 	ENSMUST00000159163.1|Aldh8a1|ENSMUSG00000037542.7|aldehyde dehydrogenase 8 family, member A1
mm10_v2_chr5_-_5664196_5664253	0.598672	Foxk1_Foxj1	ENSMUST00000061008.3|A330021E22Rik|ENSMUSG00000040473.9|RIKEN cDNA A330021E22 gene 	ENSMUST00000054865.6|A330021E22Rik|ENSMUSG00000040473.9|RIKEN cDNA A330021E22 gene
mm10_v2_chr7_-_133123409_133123472	0.597915	Foxk1_Foxj1	ENSMUST00000170459.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000166400.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr5_-_31526693_31526773	0.596738	Foxk1_Foxj1	ENSMUST00000118874.1|Supt7l|ENSMUSG00000053134.7|suppressor of Ty 7-like 	ENSMUST00000117642.1|Supt7l|ENSMUSG00000053134.7|suppressor of Ty 7-like 	ENSMUST00000065388.4|Supt7l|ENSMUSG00000053134.7|suppressor of Ty 7-like
mm10_v2_chrX_+_166344692_166344770	0.594318	Foxk1_Foxj1	ENSMUST00000112223.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112224.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112229.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112228.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112227.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b 	ENSMUST00000112226.2|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr8_+_70724064_70724078	0.594212	Foxk1_Foxj1	ENSMUST00000034307.7|Pde4c|ENSMUSG00000031842.7|phosphodiesterase 4C, cAMP specific 	ENSMUST00000110095.2|Pde4c|ENSMUSG00000031842.7|phosphodiesterase 4C, cAMP specific
mm10_v2_chr9_+_57827284_57827347	0.593092	Foxk1_Foxj1	ENSMUST00000163186.1|Gm17231|ENSMUSG00000091908.1|predicted gene 17231
mm10_v2_chr11_+_101732950_101732965	0.592388	Foxk1_Foxj1	ENSMUST00000039152.7|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr1_-_45503282_45503282	0.588858	Foxk1_Foxj1	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr6_-_69400097_69400097	0.584531	Foxk1_Foxj1	ENSMUST00000177795.1|Igkv4-62|ENSMUSG00000094262.1|immunoglobulin kappa variable 4-62
mm10_v2_chr8_-_47713920_47713938	0.582824	Foxk1_Foxj1	ENSMUST00000038738.5|Cdkn2aip|ENSMUSG00000038069.5|CDKN2A interacting protein
mm10_v2_chr6_-_72617000_72617000	0.582494	Foxk1_Foxj1	ENSMUST00000070524.4|Tgoln1|ENSMUSG00000056429.4|trans-golgi network protein
mm10_v2_chr8_-_18741542_18741566	0.579779	Foxk1_Foxj1	ENSMUST00000033846.6|Angpt2|ENSMUSG00000031465.6|angiopoietin 2
mm10_v2_chr9_+_21337828_21337859	0.576673	Foxk1_Foxj1	ENSMUST00000034697.7|Slc44a2|ENSMUSG00000057193.7|solute carrier family 44, member 2
mm10_v2_chr7_+_90426312_90426312	0.57586	Foxk1_Foxj1	ENSMUST00000061391.7|Ccdc89|ENSMUSG00000044362.7|coiled-coil domain containing 89
mm10_v2_chr1_+_10056922_10056926	0.57518	Foxk1_Foxj1	ENSMUST00000149214.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1
mm10_v2_chr15_-_98918131_98918231	0.574124	Foxk1_Foxj1	ENSMUST00000023736.8|Lmbr1l|ENSMUSG00000022999.8|limb region 1 like
mm10_v2_chr16_-_38550173_38550258	0.573143	Foxk1_Foxj1	ENSMUST00000036210.6|Poglut1|ENSMUSG00000034064.8|protein O-glucosyltransferase 1
mm10_v2_chr19_-_28010995_28011054	0.571017	Foxk1_Foxj1	ENSMUST00000172907.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression) 	ENSMUST00000046898.9|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr15_-_75048837_75048837	0.567777	Foxk1_Foxj1	ENSMUST00000179762.1|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1 	ENSMUST00000065408.9|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1
mm10_v2_chr7_+_33653440_33653493	0.561353	Foxk1_Foxj1	ENSMUST00000151344.1|Gm12763|ENSMUSG00000085312.1|predicted gene 12763
mm10_v2_chr6_-_97179100_97179159	0.557036	Foxk1_Foxj1	ENSMUST00000095664.3|Tmf1|ENSMUSG00000030059.9|TATA element modulatory factor 1
mm10_v2_chr11_-_58801944_58801968	0.552721	Foxk1_Foxj1	ENSMUST00000094156.4|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B 	ENSMUST00000060581.3|Fam183b|ENSMUSG00000049154.5|family with sequence similarity 183, member B
mm10_v2_chr2_+_163017354_163017513	0.547801	Foxk1_Foxj1	ENSMUST00000018002.6|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52 	ENSMUST00000150396.1|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52
mm10_v2_chr2_-_176144697_176144697	0.547796	Foxk1_Foxj1	ENSMUST00000178872.1|Gm2004|ENSMUSG00000095648.1|predicted gene 2004
mm10_v2_chr12_-_101958148_101958246	0.547421	Foxk1_Foxj1	ENSMUST00000159883.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000160251.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000161011.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000021606.5|Atxn3|ENSMUSG00000021189.5|ataxin 3
mm10_v2_chr3_+_51415986_51416044	0.540392	Foxk1_Foxj1	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr17_+_34969912_34969912	0.538335	Foxk1_Foxj1	ENSMUST00000173680.1|Gm20481|ENSMUSG00000092609.1|predicted gene 20481
mm10_v2_chrX_-_100626568_100626611	0.535587	Foxk1_Foxj1	ENSMUST00000015812.5|Pdzd11|ENSMUSG00000015668.7|PDZ domain containing 11
mm10_v2_chr8_+_75016222_75016246	0.527561	Foxk1_Foxj1	ENSMUST00000109940.1|Hmgxb4|ENSMUSG00000034518.7|HMG box domain containing 4
mm10_v2_chrY_+_13252442_13252442	0.522267	Foxk1_Foxj1	ENSMUST00000178599.1|Gm21440|ENSMUSG00000093903.1|predicted gene, 21440
mm10_v2_chr1_+_180568913_180568960	0.513493	Foxk1_Foxj1	ENSMUST00000027777.6|Parp1|ENSMUSG00000026496.6|poly (ADP-ribose) polymerase family, member 1
mm10_v2_chr11_+_69622024_69622101	0.510818	Foxk1_Foxj1	ENSMUST00000108656.2|Sat2|ENSMUSG00000069835.4|spermidine/spermine N1-acetyl transferase 2 	ENSMUST00000092969.1|Sat2|ENSMUSG00000069835.4|spermidine/spermine N1-acetyl transferase 2
mm10_v2_chr16_-_11909398_11909445	0.510457	Foxk1_Foxj1	ENSMUST00000127972.1|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000121750.1|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000096272.4|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1 	ENSMUST00000073371.6|Cpped1|ENSMUSG00000065979.6|calcineurin-like phosphoesterase domain containing 1
mm10_v2_chr12_+_49401277_49401277	0.509134	Foxk1_Foxj1	ENSMUST00000056234.3|Gm9804|ENSMUSG00000045946.3|predicted gene 9804
mm10_v2_chr12_+_76444560_76444560	0.508056	Foxk1_Foxj1	ENSMUST00000101281.2|Gm10451|ENSMUSG00000073000.2|predicted gene 10451
mm10_v2_chr10_-_62792243_62792368	0.505772	Foxk1_Foxj1	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chrX_+_71364745_71364794	0.49855	Foxk1_Foxj1	ENSMUST00000114601.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000146213.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000015358.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1
mm10_v2_chr16_+_48872608_48872626	0.496716	Foxk1_Foxj1	ENSMUST00000065666.4|Retnlg|ENSMUSG00000022651.5|resistin like gamma
mm10_v2_chr1_+_132417409_132417464	0.496187	Foxk1_Foxj1	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chr7_+_133637686_133637742	0.491764	Foxk1_Foxj1	ENSMUST00000128901.2|2700050L05Rik|ENSMUSG00000039990.9|RIKEN cDNA 2700050L05 gene
mm10_v2_chr6_+_68161415_68161415	0.489071	Foxk1_Foxj1	ENSMUST00000168090.1|Igkv1-115|ENSMUSG00000091800.1|immunoglobulin kappa variable 1-115
mm10_v2_chr7_+_133637543_133637559	0.487194	Foxk1_Foxj1	ENSMUST00000051169.6|2700050L05Rik|ENSMUSG00000039990.9|RIKEN cDNA 2700050L05 gene
mm10_v2_chr2_+_126556128_126556128	0.486776	Foxk1_Foxj1	ENSMUST00000141482.2|Slc27a2|ENSMUSG00000027359.10|solute carrier family 27 (fatty acid transporter), member 2
mm10_v2_chr14_-_55784027_55784073	0.486701	Foxk1_Foxj1	ENSMUST00000170223.1|Adcy4|ENSMUSG00000022220.7|adenylate cyclase 4
mm10_v2_chr3_+_60501252_60501275	0.486153	Foxk1_Foxj1	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr6_+_117907795_117907832	0.485958	Foxk1_Foxj1	ENSMUST00000167657.1|Hnrnpf|ENSMUSG00000042079.7|heterogeneous nuclear ribonucleoprotein F
mm10_v2_chr10_+_111972664_111972805	0.482709	Foxk1_Foxj1	ENSMUST00000163048.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000174653.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr2_-_119541513_119541513	0.481678	Foxk1_Foxj1	ENSMUST00000171024.1|Exd1|ENSMUSG00000048647.3|exonuclease 3'-5' domain containing 1
mm10_v2_chr10_+_118860826_118860826	0.478047	Foxk1_Foxj1	ENSMUST00000059966.4|4932442E05Rik|ENSMUSG00000050709.4|RIKEN cDNA 4932442E05 gene
mm10_v2_chr10_+_96616998_96617015	0.476349	Foxk1_Foxj1	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr5_-_129008546_129008596	0.473937	Foxk1_Foxj1	ENSMUST00000031378.7|Stx2|ENSMUSG00000029428.7|syntaxin 2
mm10_v2_chr5_-_129008494_129008537	0.473241	Foxk1_Foxj1	ENSMUST00000100680.3|Stx2|ENSMUSG00000029428.7|syntaxin 2
mm10_v2_chr19_-_28011138_28011181	0.472164	Foxk1_Foxj1	ENSMUST00000174850.1|Rfx3|ENSMUSG00000040929.10|regulatory factor X, 3 (influences HLA class II expression)
mm10_v2_chr19_-_32061438_32061469	0.466598	Foxk1_Foxj1	ENSMUST00000096119.4|Asah2|ENSMUSG00000024887.9|N-acylsphingosine amidohydrolase 2
mm10_v2_chr19_+_5041337_5041416	0.462162	Foxk1_Foxj1	ENSMUST00000116567.2|Brms1|ENSMUSG00000080268.3|breast cancer metastasis-suppressor 1
mm10_v2_chr13_+_55209776_55209788	0.458215	Foxk1_Foxj1	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr4_+_49632046_49632110	0.456551	Foxk1_Foxj1	ENSMUST00000156314.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000167496.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000029989.4|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000146547.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20
mm10_v2_chr11_+_23020464_23020556	0.456122	Foxk1_Foxj1	ENSMUST00000094363.3|Fam161a|ENSMUSG00000049811.9|family with sequence similarity 161, member A 	ENSMUST00000151877.1|Fam161a|ENSMUSG00000049811.9|family with sequence similarity 161, member A
mm10_v2_chr1_+_69826986_69827003	0.454349	Foxk1_Foxj1	ENSMUST00000065425.5|Spag16|ENSMUSG00000053153.8|sperm associated antigen 16 	ENSMUST00000113940.2|Spag16|ENSMUSG00000053153.8|sperm associated antigen 16
mm10_v2_chr5_+_122209729_122209914	0.453337	Foxk1_Foxj1	ENSMUST00000072602.7|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1 	ENSMUST00000143560.1|Hvcn1|ENSMUSG00000064267.7|hydrogen voltage-gated channel 1
mm10_v2_chr19_-_33761949_33761951	0.451946	Foxk1_Foxj1	ENSMUST00000147153.1|Lipo2|ENSMUSG00000087303.1|lipase, member O2 	ENSMUST00000025694.6|Lipo1|ENSMUSG00000024766.8|lipase, member O1
mm10_v2_chr7_-_103741322_103741322	0.44687	Foxk1_Foxj1	ENSMUST00000051346.2|Olfr629|ENSMUSG00000047545.2|olfactory receptor 629
mm10_v2_chr2_-_175327598_175327598	0.442195	Foxk1_Foxj1	ENSMUST00000109050.2|Gm4631|ENSMUSG00000078899.3|predicted gene 4631
mm10_v2_chrX_-_162888426_162888473	0.440046	Foxk1_Foxj1	ENSMUST00000033723.3|Syap1|ENSMUSG00000031357.3|synapse associated protein 1
mm10_v2_chr16_-_34262945_34262972	0.437359	Foxk1_Foxj1	ENSMUST00000114953.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr19_+_23675839_23675863	0.437355	Foxk1_Foxj1	ENSMUST00000056396.5|Gm6563|ENSMUSG00000051255.5|predicted pseudogene 6563
mm10_v2_chr8_-_8690493_8690538	0.435705	Foxk1_Foxj1	ENSMUST00000048545.8|Arglu1|ENSMUSG00000040459.10|arginine and glutamate rich 1
mm10_v2_chr10_-_127030813_127030840	0.433476	Foxk1_Foxj1	ENSMUST00000040560.4|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr10_+_5593718_5593739	0.426144	Foxk1_Foxj1	ENSMUST00000051809.8|Myct1|ENSMUSG00000046916.8|myc target 1
mm10_v2_chr3_+_33799791_33799955	0.422481	Foxk1_Foxj1	ENSMUST00000099153.3|Ttc14|ENSMUSG00000027677.11|tetratricopeptide repeat domain 14
mm10_v2_chr10_+_127421208_127421235	0.420583	Foxk1_Foxj1	ENSMUST00000168780.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr8_-_84237042_84237061	0.420116	Foxk1_Foxj1	ENSMUST00000039480.5|Zswim4|ENSMUSG00000035671.5|zinc finger SWIM-type containing 4
mm10_v2_chr1_+_164312879_164312879	0.414175	Foxk1_Foxj1	ENSMUST00000086028.5|Nme7|ENSMUSG00000026575.10|NME/NM23 family member 7
mm10_v2_chrM_+_3906_3926	0.413609	Foxk1_Foxj1	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr5_-_146220901_146220987	0.41218	Foxk1_Foxj1	ENSMUST00000169407.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000161331.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000159074.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000067837.3|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr2_+_167538192_167538210	0.411015	Foxk1_Foxj1	ENSMUST00000052631.7|Snai1|ENSMUSG00000042821.7|snail homolog 1 (Drosophila)
mm10_v2_chr4_-_118409219_118409282	0.408463	Foxk1_Foxj1	ENSMUST00000075406.5|Szt2|ENSMUSG00000033253.12|seizure threshold 2
mm10_v2_chr6_-_148896150_148896237	0.405545	Foxk1_Foxj1	ENSMUST00000072324.5|Caprin2|ENSMUSG00000030309.10|caprin family member 2 	ENSMUST00000111569.2|Caprin2|ENSMUSG00000030309.10|caprin family member 2
mm10_v2_chr5_-_151651216_151651242	0.404834	Foxk1_Foxj1	ENSMUST00000038131.9|Rfc3|ENSMUSG00000033970.9|replication factor C (activator 1) 3
mm10_v2_chr16_-_20425881_20425986	0.404833	Foxk1_Foxj1	ENSMUST00000077867.3|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr1_+_58505135_58505162	0.403404	Foxk1_Foxj1	ENSMUST00000160947.1|Gm15834|ENSMUSG00000085054.2|predicted gene 15834 	ENSMUST00000129740.2|Gm15834|ENSMUSG00000085054.2|predicted gene 15834 	ENSMUST00000139825.1|Gm15834|ENSMUSG00000085054.2|predicted gene 15834
mm10_v2_chr7_-_24299310_24299368	0.402224	Foxk1_Foxj1	ENSMUST00000145131.1|Zfp61|ENSMUSG00000050605.11|zinc finger protein 61
mm10_v2_chr2_-_175133322_175133322	0.399439	Foxk1_Foxj1	ENSMUST00000099029.3|Gm14399|ENSMUSG00000090093.2|predicted gene 14399
mm10_v2_chr4_+_12089373_12089441	0.398377	Foxk1_Foxj1	ENSMUST00000095143.2|Rbm12b2|ENSMUSG00000052137.5|RNA binding motif protein 12 B2 	ENSMUST00000063839.5|Rbm12b2|ENSMUSG00000052137.5|RNA binding motif protein 12 B2
mm10_v2_chr3_+_79884496_79884571	0.396296	Foxk1_Foxj1	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr2_-_106003549_106003549	0.392818	Foxk1_Foxj1	ENSMUST00000102555.4|Dnajc24|ENSMUSG00000027166.8|DnaJ (Hsp40) homolog, subfamily C, member 24
mm10_v2_chr9_-_64022043_64022066	0.387655	Foxk1_Foxj1	ENSMUST00000041029.5|Smad6|ENSMUSG00000036867.7|SMAD family member 6
mm10_v2_chr5_+_108461222_108461241	0.384109	Foxk1_Foxj1	ENSMUST00000046975.5|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3 	ENSMUST00000112597.1|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3
mm10_v2_chr4_+_49631999_49632010	0.379314	Foxk1_Foxj1	ENSMUST00000140341.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20
mm10_v2_chr16_-_44558879_44558905	0.377319	Foxk1_Foxj1	ENSMUST00000114634.1|Boc|ENSMUSG00000022687.5|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm10_v2_chr8_-_69625503_69625559	0.373214	Foxk1_Foxj1	ENSMUST00000121886.1|Zfp868|ENSMUSG00000060427.9|zinc finger protein 868
mm10_v2_chrY_+_17874741_17874741	0.369947	Foxk1_Foxj1	ENSMUST00000177639.1|Gm20831|ENSMUSG00000094325.1|predicted gene, 20831
mm10_v2_chr18_+_34758890_34758906	0.36951	Foxk1_Foxj1	ENSMUST00000049281.5|Fam53c|ENSMUSG00000034300.10|family with sequence similarity 53, member C
mm10_v2_chr10_-_127030789_127030812	0.366104	Foxk1_Foxj1	ENSMUST00000120547.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial 	ENSMUST00000152054.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr2_-_66256576_66256645	0.365706	Foxk1_Foxj1	ENSMUST00000125446.2|Ttc21b|ENSMUSG00000034848.11|tetratricopeptide repeat domain 21B 	ENSMUST00000102718.3|Ttc21b|ENSMUSG00000034848.11|tetratricopeptide repeat domain 21B
mm10_v2_chr19_+_12846773_12846781	0.363471	Foxk1_Foxj1	ENSMUST00000164001.1|Gm5244|ENSMUSG00000091014.1|predicted pseudogene 5244
mm10_v2_chrM_+_2743_2761	0.362242	Foxk1_Foxj1	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chrX_+_170010744_170010744	0.35901	Foxk1_Foxj1	ENSMUST00000178789.1|Gm21887|ENSMUSG00000095562.1|predicted gene, 21887
mm10_v2_chr4_+_147507600_147507600	0.356622	Foxk1_Foxj1	ENSMUST00000063704.7|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr15_-_42676967_42676978	0.353002	Foxk1_Foxj1	ENSMUST00000022921.5|Angpt1|ENSMUSG00000022309.8|angiopoietin 1
mm10_v2_chr16_+_56075399_56075492	0.35285	Foxk1_Foxj1	ENSMUST00000089362.2|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000089360.3|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000049128.6|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7
mm10_v2_chr11_+_101733011_101733041	0.352288	Foxk1_Foxj1	ENSMUST00000129741.1|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr17_+_29679247_29679270	0.350854	Foxk1_Foxj1	ENSMUST00000129864.1|Cmtr1|ENSMUSG00000024019.11|cap methyltransferase 1
mm10_v2_chr5_+_138441468_138441540	0.347432	Foxk1_Foxj1	ENSMUST00000085856.5|Zfp157|ENSMUSG00000036898.10|zinc finger protein 157 	ENSMUST00000110912.1|Zfp157|ENSMUSG00000036898.10|zinc finger protein 157 	ENSMUST00000100524.2|Zfp157|ENSMUSG00000036898.10|zinc finger protein 157
mm10_v2_chr15_+_76343504_76343558	0.346841	Foxk1_Foxj1	ENSMUST00000023210.6|Cyc1|ENSMUSG00000022551.7|cytochrome c-1
mm10_v2_chr8_+_75109528_75109601	0.338794	Foxk1_Foxj1	ENSMUST00000164309.1|Mcm5|ENSMUSG00000005410.5|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)
mm10_v2_chr10_-_30600662_30600749	0.334911	Foxk1_Foxj1	ENSMUST00000019927.6|Trmt11|ENSMUSG00000019792.7|tRNA methyltransferase 11
mm10_v2_chr18_+_4993795_4993819	0.332831	Foxk1_Foxj1	ENSMUST00000153016.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr10_+_127420867_127420916	0.329132	Foxk1_Foxj1	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr1_+_165769392_165769476	0.328854	Foxk1_Foxj1	ENSMUST00000040298.4|Creg1|ENSMUSG00000040713.6|cellular repressor of E1A-stimulated genes 1
mm10_v2_chr7_+_127904079_127904125	0.32661	Foxk1_Foxj1	ENSMUST00000071056.7|Bckdk|ENSMUSG00000030802.8|branched chain ketoacid dehydrogenase kinase
mm10_v2_chr2_-_175131864_175131864	0.320854	Foxk1_Foxj1	ENSMUST00000108929.2|Gm14399|ENSMUSG00000090093.2|predicted gene 14399
mm10_v2_chr17_+_40811089_40811133	0.316561	Foxk1_Foxj1	ENSMUST00000024721.7|Rhag|ENSMUSG00000023926.7|Rhesus blood group-associated A glycoprotein
mm10_v2_chr10_-_18234930_18235008	0.315774	Foxk1_Foxj1	ENSMUST00000052648.8|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000080860.6|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A 	ENSMUST00000173243.1|Ccdc28a|ENSMUSG00000059554.6|coiled-coil domain containing 28A
mm10_v2_chr12_-_4689926_4689926	0.315405	Foxk1_Foxj1	ENSMUST00000080062.6|Gm17541|ENSMUSG00000091732.1|predicted gene, 17541
mm10_v2_chr7_-_34655500_34655515	0.311455	Foxk1_Foxj1	ENSMUST00000032709.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr4_+_134923589_134923593	0.311201	Foxk1_Foxj1	ENSMUST00000078084.6|D4Wsu53e|ENSMUSG00000037266.12|DNA segment, Chr 4, Wayne State University 53, expressed
mm10_v2_chr12_+_52097737_52097775	0.310195	Foxk1_Foxj1	ENSMUST00000040090.9|Nubpl|ENSMUSG00000035142.12|nucleotide binding protein-like
mm10_v2_chr9_+_102717277_102717303	0.309884	Foxk1_Foxj1	ENSMUST00000153911.1|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2
mm10_v2_chr3_-_113630068_113630149	0.309646	Foxk1_Foxj1	ENSMUST00000092154.3|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106536.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106535.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3
mm10_v2_chr6_+_112696772_112696786	0.307027	Foxk1_Foxj1	ENSMUST00000180959.1|Gm26799|ENSMUSG00000097579.1|predicted gene, 26799
mm10_v2_chr10_+_75212065_75212150	0.306506	Foxk1_Foxj1	ENSMUST00000105421.2|Specc1l|ENSMUSG00000033444.7|sperm antigen with calponin homology and coiled-coil domains 1-like
mm10_v2_chrX_+_20617503_20617816	0.305796	Foxk1_Foxj1	ENSMUST00000115375.1|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10 	ENSMUST00000115374.1|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10 	ENSMUST00000084383.3|Rbm10|ENSMUSG00000031060.10|RNA binding motif protein 10
mm10_v2_chr17_+_34564268_34564299	0.305651	Foxk1_Foxj1	ENSMUST00000015612.7|Notch4|ENSMUSG00000015468.8|notch 4
mm10_v2_chr6_+_72097561_72097630	0.305179	Foxk1_Foxj1	ENSMUST00000069994.4|St3gal5|ENSMUSG00000056091.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 5 	ENSMUST00000114112.1|St3gal5|ENSMUSG00000056091.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
mm10_v2_chrX_+_86191764_86191782	0.302844	Foxk1_Foxj1	ENSMUST00000026036.4|Nr0b1|ENSMUSG00000025056.4|nuclear receptor subfamily 0, group B, member 1
mm10_v2_chr12_-_55302974_55303014	0.300637	Foxk1_Foxj1	ENSMUST00000021410.8|Ppp2r3c|ENSMUSG00000021022.8|protein phosphatase 2, regulatory subunit B'', gamma
mm10_v2_chr8_-_70523085_70523279	0.297992	Foxk1_Foxj1	ENSMUST00000137610.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1 	ENSMUST00000121623.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1 	ENSMUST00000093456.5|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1 	ENSMUST00000118850.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1
mm10_v2_chr1_-_13374072_13374083	0.292762	Foxk1_Foxj1	ENSMUST00000068304.6|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2 	ENSMUST00000006037.6|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr14_-_26442824_26442890	0.292201	Foxk1_Foxj1	ENSMUST00000136635.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein 	ENSMUST00000125437.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein
mm10_v2_chrX_-_104671048_104671071	0.279653	Foxk1_Foxj1	ENSMUST00000042070.5|Zdhhc15|ENSMUSG00000033906.5|zinc finger, DHHC domain containing 15
mm10_v2_chr17_+_36837123_36837211	0.275187	Foxk1_Foxj1	ENSMUST00000179968.1|Trim26|ENSMUSG00000024457.10|tripartite motif-containing 26 	ENSMUST00000130367.1|Trim26|ENSMUSG00000024457.10|tripartite motif-containing 26 	ENSMUST00000130801.1|Trim26|ENSMUSG00000024457.10|tripartite motif-containing 26 	ENSMUST00000144182.1|Trim26|ENSMUSG00000024457.10|tripartite motif-containing 26 	ENSMUST00000123715.1|Trim26|ENSMUSG00000024457.10|tripartite motif-containing 26 	ENSMUST00000053434.8|Trim26|ENSMUSG00000024457.10|tripartite motif-containing 26
mm10_v2_chr13_+_49682191_49682221	0.272646	Foxk1_Foxj1	ENSMUST00000172254.1|Iars|ENSMUSG00000037851.7|isoleucine-tRNA synthetase
mm10_v2_chrY_+_90785442_90785586	0.270254	Foxk1_Foxj1	ENSMUST00000177591.1|Erdr1|ENSMUSG00000096768.1|erythroid differentiation regulator 1 	ENSMUST00000177671.1|Erdr1|ENSMUSG00000096768.1|erythroid differentiation regulator 1 	ENSMUST00000179077.1|Erdr1|ENSMUSG00000096768.1|erythroid differentiation regulator 1
mm10_v2_chr6_-_112696604_112696686	0.269163	Foxk1_Foxj1	ENSMUST00000113182.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000113180.1|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000068487.5|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae) 	ENSMUST00000077088.4|Rad18|ENSMUSG00000030254.10|RAD18 homolog (S. cerevisiae)
mm10_v2_chr1_-_85270543_85270566	0.258587	Foxk1_Foxj1	ENSMUST00000093506.5|C130026I21Rik|ENSMUSG00000052477.9|RIKEN cDNA C130026I21 gene 	ENSMUST00000064341.8|C130026I21Rik|ENSMUSG00000052477.9|RIKEN cDNA C130026I21 gene
mm10_v2_chrX_+_102119447_102119490	0.255819	Foxk1_Foxj1	ENSMUST00000113627.3|Pin4|ENSMUSG00000079480.3|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
mm10_v2_chr1_+_55131317_55131331	0.255755	Foxk1_Foxj1	ENSMUST00000162553.1|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr2_-_65529275_65529404	0.248421	Foxk1_Foxj1	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr10_+_128267997_128267997	0.248125	Foxk1_Foxj1	ENSMUST00000050901.2|Apof|ENSMUSG00000047631.2|apolipoprotein F
mm10_v2_chr9_-_75559604_75559665	0.24356	Foxk1_Foxj1	ENSMUST00000072232.7|Tmod3|ENSMUSG00000058587.7|tropomodulin 3
mm10_v2_chr7_-_16221993_16222050	0.241456	Foxk1_Foxj1	ENSMUST00000118795.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000119102.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000094816.2|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000163968.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000121123.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm10_v2_chr12_-_99393010_99393090	0.235077	Foxk1_Foxj1	ENSMUST00000177451.1|Foxn3|ENSMUSG00000033713.5|forkhead box N3
mm10_v2_chrX_-_74393003_74393072	0.230228	Foxk1_Foxj1	ENSMUST00000015427.6|Fam3a|ENSMUSG00000031399.9|family with sequence similarity 3, member A
mm10_v2_chr17_+_9422060_9422060	0.230204	Foxk1_Foxj1	ENSMUST00000076982.6|Gm17728|ENSMUSG00000072968.4|predicted gene, 17728
mm10_v2_chr3_-_79145875_79145930	0.229847	Foxk1_Foxj1	ENSMUST00000118340.1|Rapgef2|ENSMUSG00000062232.8|Rap guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr11_+_43151599_43151599	0.226707	Foxk1_Foxj1	ENSMUST00000077659.5|Atp10b|ENSMUSG00000055415.7|ATPase, class V, type 10B
mm10_v2_chr10_+_127421124_127421203	0.226622	Foxk1_Foxj1	ENSMUST00000170336.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr10_-_37138863_37138937	0.226131	Foxk1_Foxj1	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr3_-_80802789_80802840	0.224233	Foxk1_Foxj1	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr8_-_22166412_22166435	0.222784	Foxk1_Foxj1	ENSMUST00000033865.9|Nek3|ENSMUSG00000031478.10|NIMA (never in mitosis gene a)-related expressed kinase 3 	ENSMUST00000110730.3|Nek3|ENSMUSG00000031478.10|NIMA (never in mitosis gene a)-related expressed kinase 3
mm10_v2_chr4_+_40722461_40722512	0.221751	Foxk1_Foxj1	ENSMUST00000030118.3|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1
mm10_v2_chr2_+_12924041_12924113	0.220081	Foxk1_Foxj1	ENSMUST00000134794.1|Pter|ENSMUSG00000026730.6|phosphotriesterase related 	ENSMUST00000028063.4|Pter|ENSMUSG00000026730.6|phosphotriesterase related 	ENSMUST00000154269.1|Pter|ENSMUSG00000026730.6|phosphotriesterase related 	ENSMUST00000114796.3|Pter|ENSMUSG00000026730.6|phosphotriesterase related
mm10_v2_chr5_-_110810080_110810113	0.217007	Foxk1_Foxj1	ENSMUST00000031490.6|Ulk1|ENSMUSG00000029512.7|unc-51 like kinase 1
mm10_v2_chr16_-_15637277_15637400	0.216853	Foxk1_Foxj1	ENSMUST00000023353.3|Mcm4|ENSMUSG00000022673.4|minichromosome maintenance deficient 4 homolog (S. cerevisiae)
mm10_v2_chr12_+_38781093_38781129	0.215291	Foxk1_Foxj1	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr2_+_175283298_175283298	0.209376	Foxk1_Foxj1	ENSMUST00000098998.3|Gm14440|ENSMUSG00000078901.2|predicted gene 14440
mm10_v2_chr3_-_28765364_28765389	0.207562	Foxk1_Foxj1	ENSMUST00000094335.3|Gm6505|ENSMUSG00000070522.3|predicted pseudogene 6505
mm10_v2_chr12_-_86079019_86079041	0.205898	Foxk1_Foxj1	ENSMUST00000003687.6|Tgfb3|ENSMUSG00000021253.6|transforming growth factor, beta 3
mm10_v2_chr2_-_50296680_50296801	0.204111	Foxk1_Foxj1	ENSMUST00000144143.1|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 	ENSMUST00000102769.4|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 	ENSMUST00000133768.1|Mmadhc|ENSMUSG00000026766.10|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
mm10_v2_chr7_-_46919915_46919986	0.201625	Foxk1_Foxj1	ENSMUST00000143413.1|Tsg101|ENSMUSG00000014402.8|tumor susceptibility gene 101 	ENSMUST00000014546.8|Tsg101|ENSMUSG00000014402.8|tumor susceptibility gene 101
mm10_v2_chr5_+_74535535_74535558	0.194969	Foxk1_Foxj1	ENSMUST00000121950.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae)
mm10_v2_chr5_-_146221391_146221420	0.193935	Foxk1_Foxj1	ENSMUST00000161574.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr4_+_115839192_115839244	0.190831	Foxk1_Foxj1	ENSMUST00000019677.5|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000144427.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000106513.3|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000130819.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000151203.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000140315.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1
mm10_v2_chr5_+_21785253_21785301	0.188824	Foxk1_Foxj1	ENSMUST00000030769.5|Psmc2|ENSMUSG00000028932.7|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm10_v2_chr5_-_21785115_21785251	0.186917	Foxk1_Foxj1	ENSMUST00000115193.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115192.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000115195.1|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2 	ENSMUST00000030771.5|Dnajc2|ENSMUSG00000029014.8|DnaJ (Hsp40) homolog, subfamily C, member 2
mm10_v2_chr2_+_163661495_163661499	0.185584	Foxk1_Foxj1	ENSMUST00000135537.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma
mm10_v2_chr5_+_74535449_74535524	0.182719	Foxk1_Foxj1	ENSMUST00000080164.5|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113536.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000122245.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000120618.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113535.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113534.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae)
mm10_v2_chr13_-_90905321_90905355	0.178281	Foxk1_Foxj1	ENSMUST00000109541.3|Atp6ap1l|ENSMUSG00000078958.3|ATPase, H+ transporting, lysosomal accessory protein 1-like
mm10_v2_chr11_-_75348261_75348324	0.176924	Foxk1_Foxj1	ENSMUST00000000767.5|Rpa1|ENSMUSG00000000751.7|replication protein A1 	ENSMUST00000092907.5|Rpa1|ENSMUSG00000000751.7|replication protein A1
mm10_v2_chr5_+_148959263_148959278	0.17604	Foxk1_Foxj1	ENSMUST00000135240.1|Gm15409|ENSMUSG00000087272.1|predicted gene 15409
mm10_v2_chr18_-_60273267_60273267	0.174238	Foxk1_Foxj1	ENSMUST00000090260.4|Gm4841|ENSMUSG00000068606.5|predicted gene 4841
mm10_v2_chr12_+_4843303_4843419	0.173064	Foxk1_Foxj1	ENSMUST00000053034.4|BC068281|ENSMUSG00000051721.4|cDNA sequence BC068281
mm10_v2_chr2_+_158375638_158375721	0.167536	Foxk1_Foxj1	ENSMUST00000109488.1|Snhg11|ENSMUSG00000044349.9|small nucleolar RNA host gene 11
mm10_v2_chr4_+_118409331_118409401	0.167134	Foxk1_Foxj1	ENSMUST00000084319.4|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000106384.3|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000126089.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000073881.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000019229.8|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000144577.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm10_v2_chr18_-_51865881_51865881	0.154903	Foxk1_Foxj1	ENSMUST00000091905.2|Gm4950|ENSMUSG00000069379.2|predicted pseudogene 4950
mm10_v2_chr11_-_3266377_3266423	0.15269	Foxk1_Foxj1	ENSMUST00000020741.5|Drg1|ENSMUSG00000020457.7|developmentally regulated GTP binding protein 1
mm10_v2_chr1_-_135167606_135167681	0.14956	Foxk1_Foxj1	ENSMUST00000027682.8|Gpr37l1|ENSMUSG00000026424.8|G protein-coupled receptor 37-like 1
mm10_v2_chr12_-_31351368_31351437	0.141631	Foxk1_Foxj1	ENSMUST00000110857.3|Dld|ENSMUSG00000020664.9|dihydrolipoamide dehydrogenase
mm10_v2_chr7_-_19604444_19604492	0.140832	Foxk1_Foxj1	ENSMUST00000086041.5|Clasrp|ENSMUSG00000061028.6|CLK4-associating serine/arginine rich protein
mm10_v2_chr1_+_128244122_128244181	0.135621	Foxk1_Foxj1	ENSMUST00000027592.3|Ubxn4|ENSMUSG00000026353.3|UBX domain protein 4
mm10_v2_chr1_+_127868773_127868807	0.134677	Foxk1_Foxj1	ENSMUST00000037649.5|Rab3gap1|ENSMUSG00000036104.5|RAB3 GTPase activating protein subunit 1
mm10_v2_chr6_-_115037824_115037881	0.132238	Foxk1_Foxj1	ENSMUST00000174848.1|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae) 	ENSMUST00000032461.5|Tamm41|ENSMUSG00000030316.7|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
mm10_v2_chr7_-_66388286_66388350	0.128119	Foxk1_Foxj1	ENSMUST00000015277.7|Lrrk1|ENSMUSG00000015133.10|leucine-rich repeat kinase 1
mm10_v2_chr2_+_3513035_3513074	0.125007	Foxk1_Foxj1	ENSMUST00000036350.2|Cdnf|ENSMUSG00000039496.2|cerebral dopamine neurotrophic factor
mm10_v2_chr2_+_117249725_117249754	0.124779	Foxk1_Foxj1	ENSMUST00000028825.4|Fam98b|ENSMUSG00000027349.5|family with sequence similarity 98, member B
mm10_v2_chr13_+_90923122_90923170	0.121769	Foxk1_Foxj1	ENSMUST00000051955.7|Rps23|ENSMUSG00000049517.7|ribosomal protein S23
mm10_v2_chr9_-_44802951_44802961	0.121095	Foxk1_Foxj1	ENSMUST00000044694.6|Ttc36|ENSMUSG00000039438.6|tetratricopeptide repeat domain 36
mm10_v2_chr3_+_58526303_58526303	0.116402	Foxk1_Foxj1	ENSMUST00000138848.1|Eif2a|ENSMUSG00000027810.8|eukaryotic translation initiation factor 2A
mm10_v2_chr15_-_55548164_55548164	0.116079	Foxk1_Foxj1	ENSMUST00000165356.1|Mrpl13|ENSMUSG00000022370.7|mitochondrial ribosomal protein L13
mm10_v2_chr11_+_77765588_77765643	0.111666	Foxk1_Foxj1	ENSMUST00000164315.1|Myo18a|ENSMUSG00000000631.13|myosin XVIIIA
mm10_v2_chr7_-_5014645_5014697	0.109359	Foxk1_Foxj1	ENSMUST00000165320.1|Fiz1|ENSMUSG00000061374.7|Flt3 interacting zinc finger protein 1
mm10_v2_chr4_+_155582476_155582495	0.109107	Foxk1_Foxj1	ENSMUST00000105612.1|Nadk|ENSMUSG00000029063.10|NAD kinase
mm10_v2_chr9_-_20521375_20521427	0.108702	Foxk1_Foxj1	ENSMUST00000068296.7|Zfp266|ENSMUSG00000060510.7|zinc finger protein 266 	ENSMUST00000174462.1|Zfp266|ENSMUSG00000060510.7|zinc finger protein 266
mm10_v2_chr17_-_24533709_24533732	0.107343	Foxk1_Foxj1	ENSMUST00000061764.7|Rab26|ENSMUSG00000079657.4|RAB26, member RAS oncogene family
mm10_v2_chr11_-_101302206_101302291	0.104327	Foxk1_Foxj1	ENSMUST00000140706.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000170502.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000172233.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related 	ENSMUST00000130916.1|Becn1|ENSMUSG00000035086.7|beclin 1, autophagy related
mm10_v2_chr6_+_38534823_38534872	0.103042	Foxk1_Foxj1	ENSMUST00000019833.4|1110001J03Rik|ENSMUSG00000019689.4|RIKEN cDNA 1110001J03 gene
mm10_v2_chr4_-_117682233_117682279	0.1026	Foxk1_Foxj1	ENSMUST00000102687.3|Dmap1|ENSMUSG00000009640.5|DNA methyltransferase 1-associated protein 1
mm10_v2_chr16_+_65815508_65815633	0.101974	Foxk1_Foxj1	ENSMUST00000168064.1|Vgll3|ENSMUSG00000091243.1|vestigial like 3 (Drosophila)
mm10_v2_chr18_-_35740499_35740554	0.0995064	Foxk1_Foxj1	ENSMUST00000115728.3|Tmem173|ENSMUSG00000024349.9|transmembrane protein 173
mm10_v2_chr11_+_87578384_87578470	0.0985648	Foxk1_Foxj1	ENSMUST00000107962.1|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000122067.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chr4_+_40723084_40723117	0.0983313	Foxk1_Foxj1	ENSMUST00000149794.1|Dnaja1|ENSMUSG00000028410.7|DnaJ (Hsp40) homolog, subfamily A, member 1
mm10_v2_chr19_-_45783512_45783558	0.0974001	Foxk1_Foxj1	ENSMUST00000026243.3|Mgea5|ENSMUSG00000025220.7|meningioma expressed antigen 5 (hyaluronidase)
mm10_v2_chr7_+_24271568_24271568	0.0924025	Foxk1_Foxj1	ENSMUST00000032696.6|Zfp93|ENSMUSG00000055305.9|zinc finger protein 93
mm10_v2_chr8_-_122476036_122476088	0.0915596	Foxk1_Foxj1	ENSMUST00000014614.3|Rnf166|ENSMUSG00000014470.4|ring finger protein 166
mm10_v2_chr2_-_104028287_104028337	0.0901304	Foxk1_Foxj1	ENSMUST00000056170.3|4931422A03Rik|ENSMUSG00000046085.7|RIKEN cDNA 4931422A03 gene
mm10_v2_chr6_-_53820764_53820837	0.0842358	Foxk1_Foxj1	ENSMUST00000127748.2|Tril|ENSMUSG00000043496.5|TLR4 interactor with leucine-rich repeats
mm10_v2_chr17_+_20570362_20570362	0.0840528	Foxk1_Foxj1	ENSMUST00000095633.3|Gm5145|ENSMUSG00000071273.3|predicted pseudogene 5145
mm10_v2_chr1_+_92906959_92907036	0.0840526	Foxk1_Foxj1	ENSMUST00000060913.6|Dusp28|ENSMUSG00000047067.6|dual specificity phosphatase 28
mm10_v2_chr17_-_26099257_26099259	0.083488	Foxk1_Foxj1	ENSMUST00000053575.3|Gm8186|ENSMUSG00000049124.3|predicted gene 8186
mm10_v2_chr6_-_33060256_33060267	0.0820813	Foxk1_Foxj1	ENSMUST00000066379.4|Chchd3|ENSMUSG00000053768.7|coiled-coil-helix-coiled-coil-helix domain containing 3
mm10_v2_chr13_-_100616911_100616981	0.0795886	Foxk1_Foxj1	ENSMUST00000168772.1|Marveld2|ENSMUSG00000021636.8|MARVEL (membrane-associating) domain containing 2 	ENSMUST00000163163.1|Marveld2|ENSMUSG00000021636.8|MARVEL (membrane-associating) domain containing 2 	ENSMUST00000022137.7|Marveld2|ENSMUSG00000021636.8|MARVEL (membrane-associating) domain containing 2
mm10_v2_chr16_-_34263179_34263208	0.0777379	Foxk1_Foxj1	ENSMUST00000114949.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase 	ENSMUST00000114954.1|Kalrn|ENSMUSG00000061751.9|kalirin, RhoGEF kinase
mm10_v2_chr12_+_38780817_38780854	0.0747899	Foxk1_Foxj1	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_+_112999964_112999964	0.0741762	Foxk1_Foxj1	ENSMUST00000180971.1|9230104M06Rik|ENSMUSG00000097100.1|RIKEN cDNA 9230104M06 gene
mm10_v2_chr14_+_58893465_58893506	0.0703747	Foxk1_Foxj1	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr10_-_53694823_53694823	0.0660616	Foxk1_Foxj1	ENSMUST00000171807.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr5_-_5749317_5749340	0.0601966	Foxk1_Foxj1	ENSMUST00000015796.2|Steap1|ENSMUSG00000015652.3|six transmembrane epithelial antigen of the prostate 1
mm10_v2_chr4_-_129662442_129662485	0.0586847	Foxk1_Foxj1	ENSMUST00000003828.4|Kpna6|ENSMUSG00000003731.7|karyopherin (importin) alpha 6
mm10_v2_chr9_-_107872403_107872422	0.0576329	Foxk1_Foxj1	ENSMUST00000183035.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr12_-_65073927_65073954	0.0560488	Foxk1_Foxj1	ENSMUST00000021332.8|Fkbp3|ENSMUSG00000020949.8|FK506 binding protein 3
mm10_v2_chr6_+_135011609_135011653	0.0490164	Foxk1_Foxj1	ENSMUST00000032326.4|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000130851.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000154558.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm10_v2_chr12_-_10900296_10900318	0.0448048	Foxk1_Foxj1	ENSMUST00000085735.2|Pgk1-rs7|ENSMUSG00000066632.2|phosphoglycerate kinase-1, related sequence-7
mm10_v2_chr5_+_100196611_100196611	0.0447378	Foxk1_Foxj1	ENSMUST00000066813.1|Gm9932|ENSMUSG00000054032.1|predicted gene 9932
mm10_v2_chr8_+_3567958_3568006	0.0437592	Foxk1_Foxj1	ENSMUST00000136592.1|C330021F23Rik|ENSMUSG00000065952.7|RIKEN cDNA C330021F23 gene
mm10_v2_chr4_-_134000857_134000918	0.0433358	Foxk1_Foxj1	ENSMUST00000105887.1|Dhdds|ENSMUSG00000012117.7|dehydrodolichyl diphosphate synthase 	ENSMUST00000012262.5|Dhdds|ENSMUSG00000012117.7|dehydrodolichyl diphosphate synthase 	ENSMUST00000144668.1|Dhdds|ENSMUSG00000012117.7|dehydrodolichyl diphosphate synthase 	ENSMUST00000105889.3|Dhdds|ENSMUSG00000012117.7|dehydrodolichyl diphosphate synthase
mm10_v2_chr6_+_79818031_79818031	0.0354435	Foxk1_Foxj1	ENSMUST00000179797.1|Gm20594|ENSMUSG00000096887.1|predicted gene, 20594
mm10_v2_chr10_-_13388830_13388970	0.031178	Foxk1_Foxj1	ENSMUST00000079698.5|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr17_+_56613392_56613425	0.0309141	Foxk1_Foxj1	ENSMUST00000080492.5|Rpl36|ENSMUSG00000057863.5|ribosomal protein L36
mm10_v2_chr4_-_117496940_117497052	0.02888	Foxk1_Foxj1	ENSMUST00000030439.8|Rnf220|ENSMUSG00000028677.12|ring finger protein 220
mm10_v2_chr2_+_31974427_31974448	0.0288066	Foxk1_Foxj1	ENSMUST00000065398.6|Nup214|ENSMUSG00000001855.9|nucleoporin 214
mm10_v2_chr11_-_69662564_69662596	0.0251637	Foxk1_Foxj1	ENSMUST00000129224.1|Mpdu1|ENSMUSG00000018761.8|mannose-P-dolichol utilization defect 1 	ENSMUST00000155200.1|Mpdu1|ENSMUSG00000018761.8|mannose-P-dolichol utilization defect 1
mm10_v2_chr5_-_100674230_100674284	0.0245825	Foxk1_Foxj1	ENSMUST00000031262.7|Coq2|ENSMUSG00000029319.7|coenzyme Q2 homolog, prenyltransferase (yeast)
mm10_v2_chr5_+_139211934_139212027	0.0206533	Foxk1_Foxj1	ENSMUST00000148772.1|Sun1|ENSMUSG00000036817.8|Sad1 and UNC84 domain containing 1 	ENSMUST00000110882.1|Sun1|ENSMUSG00000036817.8|Sad1 and UNC84 domain containing 1
mm10_v2_chr10_+_69208546_69208557	0.018805	Foxk1_Foxj1	ENSMUST00000164034.1|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1
mm10_v2_chr11_+_72301613_72301671	0.0142794	Foxk1_Foxj1	ENSMUST00000151440.1|Xaf1|ENSMUSG00000040483.9|XIAP associated factor 1 	ENSMUST00000146233.1|Xaf1|ENSMUSG00000040483.9|XIAP associated factor 1 	ENSMUST00000140842.2|Xaf1|ENSMUSG00000040483.9|XIAP associated factor 1
mm10_v2_chr18_+_21001292_21001341	0.0134652	Foxk1_Foxj1	ENSMUST00000072847.5|Rnf138|ENSMUSG00000024317.8|ring finger protein 138 	ENSMUST00000052396.5|Rnf138|ENSMUSG00000024317.8|ring finger protein 138
mm10_v2_chr16_-_19706365_19706399	0.0133277	Foxk1_Foxj1	ENSMUST00000081880.5|Lamp3|ENSMUSG00000041247.7|lysosomal-associated membrane protein 3
mm10_v2_chr4_-_137785371_137785516	0.0086698	Foxk1_Foxj1	ENSMUST00000133473.1|Alpl|ENSMUSG00000028766.4|alkaline phosphatase, liver/bone/kidney
mm10_v2_chr5_-_115098295_115098295	0.00339262	Foxk1_Foxj1	ENSMUST00000100848.2|Gm10401|ENSMUSG00000072693.2|predicted gene 10401
mm10_v2_chr7_+_27591513_27591562	0.000838617	Foxk1_Foxj1	ENSMUST00000108344.2|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr6_-_33060172_33060252	8.01502e-05	Foxk1_Foxj1	ENSMUST00000115091.1|Chchd3|ENSMUSG00000053768.7|coiled-coil-helix-coiled-coil-helix domain containing 3 	ENSMUST00000127666.1|Chchd3|ENSMUSG00000053768.7|coiled-coil-helix-coiled-coil-helix domain containing 3
