mm10_v2_chr2_-_77519565_77519647	7.75646	Foxq1	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chrX_-_103483205_103483225	6.86947	Foxq1	ENSMUST00000127786.2|Xist|ENSMUSG00000086503.2|inactive X specific transcripts
mm10_v2_chr14_-_30353468_30353535	6.84586	Foxq1	ENSMUST00000112249.1|Cacna1d|ENSMUSG00000015968.10|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm10_v2_chr16_+_43363855_43363888	6.17469	Foxq1	ENSMUST00000156367.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr2_+_76406529_76406580	5.06174	Foxq1	ENSMUST00000111929.1|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6 	ENSMUST00000077972.4|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6 	ENSMUST00000111930.2|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6
mm10_v2_chr16_+_43364145_43364204	5.06103	Foxq1	ENSMUST00000148775.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr18_-_89769479_89769558	4.82131	Foxq1	ENSMUST00000097495.3|Dok6|ENSMUSG00000073514.3|docking protein 6
mm10_v2_chr8_-_84773381_84773427	4.5892	Foxq1	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr18_+_51117754_51117898	4.58487	Foxq1	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr18_+_37496997_37496997	4.30454	Foxq1	ENSMUST00000059571.5|Pcdhb19|ENSMUSG00000043313.5|protocadherin beta 19
mm10_v2_chr5_+_122643878_122644009	4.11164	Foxq1	ENSMUST00000100737.3|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000121489.1|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000031425.8|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7 	ENSMUST00000086247.5|P2rx7|ENSMUSG00000029468.11|purinergic receptor P2X, ligand-gated ion channel, 7
mm10_v2_chr18_+_37442517_37442517	4.04915	Foxq1	ENSMUST00000056915.1|Pcdhb13|ENSMUSG00000047307.1|protocadherin beta 13
mm10_v2_chr11_+_16257706_16257808	4.04819	Foxq1	ENSMUST00000109645.2|Vstm2a|ENSMUSG00000048834.9|V-set and transmembrane domain containing 2A 	ENSMUST00000109647.2|Vstm2a|ENSMUSG00000048834.9|V-set and transmembrane domain containing 2A
mm10_v2_chr17_+_35076902_35077073	3.84047	Foxq1	ENSMUST00000172494.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000172678.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E 	ENSMUST00000013910.4|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E
mm10_v2_chr18_+_69344503_69344530	3.73034	Foxq1	ENSMUST00000114985.3|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr18_+_37489465_37489465	3.54518	Foxq1	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr1_+_51289106_51289142	3.52958	Foxq1	ENSMUST00000051572.6|Sdpr|ENSMUSG00000045954.6|serum deprivation response
mm10_v2_chr1_+_45311538_45311638	3.44536	Foxq1	ENSMUST00000087883.6|Col3a1|ENSMUSG00000026043.12|collagen, type III, alpha 1
mm10_v2_chr5_-_122002340_122002368	3.37861	Foxq1	ENSMUST00000134326.1|Cux2|ENSMUSG00000042589.12|cut-like homeobox 2
mm10_v2_chr18_+_37518341_37518359	3.34545	Foxq1	ENSMUST00000097609.1|Pcdhb22|ENSMUSG00000073591.3|protocadherin beta 22
mm10_v2_chr7_+_19176416_19176440	3.31509	Foxq1	ENSMUST00000117338.1|Eml2|ENSMUSG00000040811.9|echinoderm microtubule associated protein like 2
mm10_v2_chr10_+_60106452_60106468	3.3043	Foxq1	ENSMUST00000165024.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr18_+_37477768_37477835	3.12055	Foxq1	ENSMUST00000051442.5|Pcdhb16|ENSMUSG00000047910.5|protocadherin beta 16
mm10_v2_chr18_+_37447641_37447674	2.88945	Foxq1	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr4_-_129121889_129122063	2.8444	Foxq1	ENSMUST00000139450.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000125931.1|Hpca|ENSMUSG00000028785.6|hippocalcin 	ENSMUST00000116444.2|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr1_-_170110491_170110532	2.69335	Foxq1	ENSMUST00000027985.2|Ddr2|ENSMUSG00000026674.3|discoidin domain receptor family, member 2
mm10_v2_chr3_+_68584154_68584181	2.66197	Foxq1	ENSMUST00000182997.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr4_-_87806296_87806325	2.5863	Foxq1	ENSMUST00000126353.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENSMUST00000149357.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr4_-_87806276_87806294	2.55256	Foxq1	ENSMUST00000148059.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr3_+_129532386_129532440	2.42963	Foxq1	ENSMUST00000071402.2|Elovl6|ENSMUSG00000041220.6|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm10_v2_chr19_-_17837620_17837642	2.34559	Foxq1	ENSMUST00000025618.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5 	ENSMUST00000050715.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5
mm10_v2_chr3_+_7366598_7366641	2.32258	Foxq1	ENSMUST00000028999.6|Pkia|ENSMUSG00000027499.7|protein kinase inhibitor, alpha
mm10_v2_chr10_+_97479470_97479500	2.17792	Foxq1	ENSMUST00000105287.3|Dcn|ENSMUSG00000019929.9|decorin
mm10_v2_chr17_+_35077080_35077155	2.04777	Foxq1	ENSMUST00000172959.1|Ly6g6e|ENSMUSG00000013766.5|lymphocyte antigen 6 complex, locus G6E
mm10_v2_chr19_-_28963863_28963908	1.95067	Foxq1	ENSMUST00000161813.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr18_+_57468478_57468541	1.90017	Foxq1	ENSMUST00000091892.2|Ctxn3|ENSMUSG00000069372.2|cortexin 3
mm10_v2_chr14_-_103844173_103844198	1.89853	Foxq1	ENSMUST00000022718.3|Ednrb|ENSMUSG00000022122.8|endothelin receptor type B
mm10_v2_chr15_-_58214882_58214926	1.80125	Foxq1	ENSMUST00000022986.6|Fbxo32|ENSMUSG00000022358.6|F-box protein 32
mm10_v2_chr3_-_146781351_146781431	1.73858	Foxq1	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr7_+_141476374_141476400	1.64608	Foxq1	ENSMUST00000117634.1|Tspan4|ENSMUSG00000025511.8|tetraspanin 4
mm10_v2_chr3_+_145987835_145987901	1.63463	Foxq1	ENSMUST00000039517.6|Syde2|ENSMUSG00000036863.7|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
mm10_v2_chr11_-_54860564_54860608	1.61914	Foxq1	ENSMUST00000144164.1|Lyrm7|ENSMUSG00000020268.7|LYR motif containing 7
mm10_v2_chr1_-_6215292_6215292	1.61359	Foxq1	ENSMUST00000097832.1|4732440D04Rik|ENSMUSG00000073741.1|RIKEN cDNA 4732440D04 gene
mm10_v2_chr7_+_45783883_45783947	1.57565	Foxq1	ENSMUST00000072580.5|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr15_-_97247287_97247315	1.51928	Foxq1	ENSMUST00000053106.5|Amigo2|ENSMUSG00000048218.5|adhesion molecule with Ig like domain 2
mm10_v2_chr19_-_43674844_43674909	1.49764	Foxq1	ENSMUST00000046038.7|Slc25a28|ENSMUSG00000040414.7|solute carrier family 25, member 28
mm10_v2_chrX_-_70365052_70365112	1.49521	Foxq1	ENSMUST00000101509.2|Ids|ENSMUSG00000035847.9|iduronate 2-sulfatase
mm10_v2_chr7_+_24134148_24134184	1.49477	Foxq1	ENSMUST00000056549.7|Zfp235|ENSMUSG00000047603.8|zinc finger protein 235
mm10_v2_chr13_-_67061131_67061178	1.44851	Foxq1	ENSMUST00000167565.1|Zfp712|ENSMUSG00000090641.1|zinc finger protein 712
mm10_v2_chr6_+_36388055_36388084	1.43072	Foxq1	ENSMUST00000172278.1|Chrm2|ENSMUSG00000045613.3|cholinergic receptor, muscarinic 2, cardiac
mm10_v2_chr19_-_56822161_56822220	1.42828	Foxq1	ENSMUST00000118592.1|A630007B06Rik|ENSMUSG00000035173.8|RIKEN cDNA A630007B06 gene
mm10_v2_chr7_+_110772604_110772754	1.35662	Foxq1	ENSMUST00000005829.6|Ampd3|ENSMUSG00000005686.10|adenosine monophosphate deaminase 3
mm10_v2_chr10_+_34297421_34297513	1.30014	Foxq1	ENSMUST00000047935.6|Tspyl4|ENSMUSG00000039485.6|TSPY-like 4
mm10_v2_chr2_-_7395879_7395912	1.26102	Foxq1	ENSMUST00000182404.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr7_-_100932140_100932200	1.2429	Foxq1	ENSMUST00000107032.1|Arhgef17|ENSMUSG00000032875.7|Rho guanine nucleotide exchange factor (GEF) 17
mm10_v2_chr19_-_36919606_36919622	1.24024	Foxq1	ENSMUST00000057337.7|Fgfbp3|ENSMUSG00000047632.10|fibroblast growth factor binding protein 3
mm10_v2_chr14_-_36935560_36935578	1.23266	Foxq1	ENSMUST00000183038.1|Ccser2|ENSMUSG00000058690.8|coiled-coil serine rich 2
mm10_v2_chr9_-_112187766_112187862	1.22359	Foxq1	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr13_-_21453714_21453761	1.20814	Foxq1	ENSMUST00000032820.7|Zscan26|ENSMUSG00000022228.7|zinc finger and SCAN domain containing 26 	ENSMUST00000110485.1|Zscan26|ENSMUSG00000022228.7|zinc finger and SCAN domain containing 26
mm10_v2_chr13_-_67637776_67637801	1.19882	Foxq1	ENSMUST00000012314.8|A530054K11Rik|ENSMUSG00000021510.10|RIKEN cDNA A530054K11 gene
mm10_v2_chr2_+_91256144_91256170	1.1861	Foxq1	ENSMUST00000154959.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3 	ENSMUST00000059566.4|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr7_+_120917744_120917815	1.17615	Foxq1	ENSMUST00000033173.7|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E 	ENSMUST00000106483.2|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E
mm10_v2_chr2_-_6722187_6722236	1.1247	Foxq1	ENSMUST00000182657.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr15_-_89196457_89196478	1.11038	Foxq1	ENSMUST00000078953.7|Dennd6b|ENSMUSG00000015377.9|DENN/MADD domain containing 6B
mm10_v2_chr2_+_120977017_120977107	1.09222	Foxq1	ENSMUST00000067582.7|Tmem62|ENSMUSG00000054484.8|transmembrane protein 62
mm10_v2_chr1_-_195131536_195131588	1.05649	Foxq1	ENSMUST00000075451.6|Cr1l|ENSMUSG00000016481.10|complement component (3b/4b) receptor 1-like
mm10_v2_chr16_+_91391721_91391721	1.04663	Foxq1	ENSMUST00000160764.1|Gm21970|ENSMUSG00000093701.1|predicted gene 21970
mm10_v2_chr8_+_25911670_25911692	1.04604	Foxq1	ENSMUST00000120653.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1 	ENSMUST00000126226.1|Kcnu1|ENSMUSG00000031576.9|potassium channel, subfamily U, member 1
mm10_v2_chr15_+_97247011_97247107	1.04505	Foxq1	ENSMUST00000059433.6|Pced1b|ENSMUSG00000044250.7|PC-esterase domain containing 1B
mm10_v2_chr3_+_53488677_53488727	1.02585	Foxq1	ENSMUST00000029307.3|Stoml3|ENSMUSG00000027744.3|stomatin (Epb7.2)-like 3
mm10_v2_chr11_-_107348130_107348179	1.02263	Foxq1	ENSMUST00000134763.1|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr3_+_136670076_136670186	0.990432	Foxq1	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr12_+_33314277_33314328	0.952424	Foxq1	ENSMUST00000133549.1|Atxn7l1|ENSMUSG00000020564.10|ataxin 7-like 1
mm10_v2_chr8_+_93810832_93810843	0.941131	Foxq1	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr10_+_90576252_90576517	0.924615	Foxq1	ENSMUST00000182427.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182053.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182113.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr6_-_39725448_39725478	0.862612	Foxq1	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr5_-_146220901_146220987	0.84453	Foxq1	ENSMUST00000169407.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000161331.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000159074.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000067837.3|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr3_+_135825648_135825664	0.827823	Foxq1	ENSMUST00000180196.1|Slc39a8|ENSMUSG00000053897.9|solute carrier family 39 (metal ion transporter), member 8
mm10_v2_chr17_-_32822200_32822200	0.809827	Foxq1	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr16_-_92400067_92400083	0.793275	Foxq1	ENSMUST00000023672.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr12_-_104865076_104865138	0.777932	Foxq1	ENSMUST00000109937.1|Clmn|ENSMUSG00000021097.8|calmin 	ENSMUST00000109936.1|Clmn|ENSMUSG00000021097.8|calmin
mm10_v2_chr9_-_110375430_110375430	0.749124	Foxq1	ENSMUST00000168137.1|5830462I19Rik|ENSMUSG00000091102.1|RIKEN cDNA 5830462I19 gene
mm10_v2_chr5_-_123140135_123140289	0.745493	Foxq1	ENSMUST00000160099.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr4_+_139622842_139622902	0.718114	Foxq1	ENSMUST00000039818.9|Aldh4a1|ENSMUSG00000028737.9|aldehyde dehydrogenase 4 family, member A1
mm10_v2_chr6_-_48086530_48086658	0.675937	Foxq1	ENSMUST00000073124.6|Zfp746|ENSMUSG00000057691.6|zinc finger protein 746
mm10_v2_chr12_-_101958148_101958246	0.670449	Foxq1	ENSMUST00000159883.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000160251.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000161011.1|Atxn3|ENSMUSG00000021189.5|ataxin 3 	ENSMUST00000021606.5|Atxn3|ENSMUSG00000021189.5|ataxin 3
mm10_v2_chr1_+_33719863_33719901	0.632688	Foxq1	ENSMUST00000088287.3|Rab23|ENSMUSG00000004768.8|RAB23, member RAS oncogene family
mm10_v2_chr1_-_43098622_43098686	0.609979	Foxq1	ENSMUST00000095014.1|Tgfbrap1|ENSMUSG00000070939.3|transforming growth factor, beta receptor associated protein 1
mm10_v2_chr3_+_122419772_122419787	0.583647	Foxq1	ENSMUST00000029766.4|Bcar3|ENSMUSG00000028121.4|breast cancer anti-estrogen resistance 3
mm10_v2_chr6_+_38918969_38918995	0.567688	Foxq1	ENSMUST00000003017.6|Tbxas1|ENSMUSG00000029925.7|thromboxane A synthase 1, platelet
mm10_v2_chr1_+_89454769_89454885	0.564271	Foxq1	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr7_-_38019505_38019552	0.498985	Foxq1	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr1_+_87404916_87404964	0.477575	Foxq1	ENSMUST00000173152.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2 	ENSMUST00000173663.1|Gigyf2|ENSMUSG00000048000.9|GRB10 interacting GYF protein 2
mm10_v2_chr3_-_36053512_36053547	0.474516	Foxq1	ENSMUST00000166644.2|Ccdc144b|ENSMUSG00000047696.10|coiled-coil domain containing 144B 	ENSMUST00000062056.8|Ccdc144b|ENSMUSG00000047696.10|coiled-coil domain containing 144B
mm10_v2_chr2_+_112284561_112284610	0.455197	Foxq1	ENSMUST00000053666.7|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr2_-_37703275_37703290	0.447221	Foxq1	ENSMUST00000072186.5|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr7_+_24270420_24270420	0.443347	Foxq1	ENSMUST00000108438.3|Zfp93|ENSMUSG00000055305.9|zinc finger protein 93
mm10_v2_chr7_+_120677579_120677630	0.432227	Foxq1	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr2_+_91255954_91256105	0.416212	Foxq1	ENSMUST00000134699.1|Pacsin3|ENSMUSG00000027257.7|protein kinase C and casein kinase substrate in neurons 3
mm10_v2_chr15_-_102189032_102189050	0.411692	Foxq1	ENSMUST00000023805.1|Csad|ENSMUSG00000023044.1|cysteine sulfinic acid decarboxylase
mm10_v2_chr13_+_40917626_40917657	0.389022	Foxq1	ENSMUST00000067778.6|Gcnt2|ENSMUSG00000021360.9|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm10_v2_chr3_-_57301919_57301956	0.38729	Foxq1	ENSMUST00000029376.8|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr12_-_110840905_110840950	0.345039	Foxq1	ENSMUST00000177224.1|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000084974.4|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000070565.8|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30
mm10_v2_chr2_-_176917518_176917518	0.343994	Foxq1	ENSMUST00000108931.2|Gm14296|ENSMUSG00000074527.5|predicted gene 14296
mm10_v2_chr4_+_108847827_108847895	0.313581	Foxq1	ENSMUST00000102738.2|Kti12|ENSMUSG00000073775.3|KTI12 homolog, chromatin associated (S. cerevisiae)
mm10_v2_chr1_+_43098710_43098760	0.30885	Foxq1	ENSMUST00000010434.7|AI597479|ENSMUSG00000010290.7|expressed sequence AI597479
mm10_v2_chr16_-_85550417_85550432	0.283791	Foxq1	ENSMUST00000175700.1|Cyyr1|ENSMUSG00000041134.9|cysteine and tyrosine-rich protein 1 	ENSMUST00000114174.2|Cyyr1|ENSMUSG00000041134.9|cysteine and tyrosine-rich protein 1
mm10_v2_chr10_-_53638269_53638269	0.274028	Foxq1	ENSMUST00000164393.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr9_+_15239045_15239155	0.222708	Foxq1	ENSMUST00000034413.6|Vstm5|ENSMUSG00000031937.6|V-set and transmembrane domain containing 5
mm10_v2_chr6_+_39592569_39592588	0.208407	Foxq1	ENSMUST00000135671.1|Ndufb2|ENSMUSG00000002416.7|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 	ENSMUST00000119379.1|Ndufb2|ENSMUSG00000002416.7|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2
mm10_v2_chr11_-_62392605_62392659	0.202411	Foxq1	ENSMUST00000151498.2|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1 	ENSMUST00000159069.1|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1
mm10_v2_chr18_-_3281036_3281132	0.186781	Foxq1	ENSMUST00000049942.6|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000139537.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000124747.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr9_+_50494516_50494533	0.18117	Foxq1	ENSMUST00000114474.1|1600029D21Rik|ENSMUSG00000032068.8|RIKEN cDNA 1600029D21 gene
mm10_v2_chr2_-_37647199_37647285	0.17723	Foxq1	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chrX_+_38600626_38600691	0.171528	Foxq1	ENSMUST00000000365.2|Mcts1|ENSMUSG00000000355.7|malignant T cell amplified sequence 1
mm10_v2_chr12_+_77238093_77238122	0.169042	Foxq1	ENSMUST00000177595.1|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8 	ENSMUST00000171770.2|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8
mm10_v2_chr10_-_80900749_80900969	0.162572	Foxq1	ENSMUST00000020440.6|Timm13|ENSMUSG00000020219.6|translocase of inner mitochondrial membrane 13
mm10_v2_chr8_-_67515606_67515606	0.160668	Foxq1	ENSMUST00000032981.5|Gm9755|ENSMUSG00000030735.5|predicted pseudogene 9755
mm10_v2_chr3_+_79884496_79884571	0.160613	Foxq1	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr1_-_132707304_132707326	0.158708	Foxq1	ENSMUST00000043189.7|Nfasc|ENSMUSG00000026442.8|neurofascin
mm10_v2_chr10_+_69925954_69926133	0.158567	Foxq1	ENSMUST00000181974.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182795.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182437.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr4_+_109343029_109343081	0.144242	Foxq1	ENSMUST00000030281.5|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr9_+_70678950_70679010	0.141796	Foxq1	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr5_+_25247344_25247363	0.13547	Foxq1	ENSMUST00000114950.1|Galnt11|ENSMUSG00000038072.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm10_v2_chr15_-_50882806_50882822	0.117523	Foxq1	ENSMUST00000184885.1|Trps1|ENSMUSG00000038679.10|trichorhinophalangeal syndrome I (human)
mm10_v2_chr8_+_86745679_86745699	0.117365	Foxq1	ENSMUST00000098532.2|Gm10638|ENSMUSG00000074178.2|predicted gene 10638
mm10_v2_chr2_-_181581996_181582008	0.117285	Foxq1	ENSMUST00000057816.8|Uckl1|ENSMUSG00000089917.1|uridine-cytidine kinase 1-like 1
mm10_v2_chr14_+_124005355_124005355	0.093096	Foxq1	ENSMUST00000166105.1|Gm17615|ENSMUSG00000090286.1|predicted gene, 17615
mm10_v2_chr14_+_58072686_58072686	0.0593615	Foxq1	ENSMUST00000022545.7|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr9_+_108560422_108560534	0.0526372	Foxq1	ENSMUST00000081111.8|Impdh2|ENSMUSG00000062867.8|inosine 5'-phosphate dehydrogenase 2
mm10_v2_chr16_+_13358375_13358439	0.0425568	Foxq1	ENSMUST00000149359.1|Mkl2|ENSMUSG00000009569.8|MKL/myocardin-like 2
mm10_v2_chr5_-_31108218_31108237	0.0374007	Foxq1	ENSMUST00000182776.1|Slc30a3|ENSMUSG00000029151.8|solute carrier family 30 (zinc transporter), member 3 	ENSMUST00000182444.1|Slc30a3|ENSMUSG00000029151.8|solute carrier family 30 (zinc transporter), member 3
mm10_v2_chr4_+_32243733_32243733	0.0175325	Foxq1	ENSMUST00000165661.1|D130062J21Rik|ENSMUSG00000090278.1|RIKEN cDNA D130062J21 gene
