mm10_v2_chrX_-_43274786_43274786	4.94661	Hoxa10	ENSMUST00000016294.7|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr8_+_106935720_106935776	4.79005	Hoxa10	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr3_+_67892189_67892226	4.20243	Hoxa10	ENSMUST00000063263.3|Iqcj|ENSMUSG00000051777.4|IQ motif containing J
mm10_v2_chr5_-_123666682_123666695	3.86966	Hoxa10	ENSMUST00000149410.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chr9_+_53771499_53771535	3.58464	Hoxa10	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr18_-_89769479_89769558	3.33369	Hoxa10	ENSMUST00000097495.3|Dok6|ENSMUSG00000073514.3|docking protein 6
mm10_v2_chr1_+_66321708_66321719	3.14729	Hoxa10	ENSMUST00000114013.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr2_-_79908428_79908438	3.11949	Hoxa10	ENSMUST00000102652.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102651.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr9_-_112232449_112232501	3.02385	Hoxa10	ENSMUST00000035085.5|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr13_-_99516537_99516602	2.82017	Hoxa10	ENSMUST00000064762.4|Map1b|ENSMUSG00000052727.5|microtubule-associated protein 1B
mm10_v2_chr19_+_43440404_43440447	2.74995	Hoxa10	ENSMUST00000165311.1|Cnnm1|ENSMUSG00000025189.8|cyclin M1
mm10_v2_chr10_-_11082287_11082372	2.55515	Hoxa10	ENSMUST00000105561.2|Grm1|ENSMUSG00000019828.7|glutamate receptor, metabotropic 1 	ENSMUST00000044306.6|Grm1|ENSMUSG00000019828.7|glutamate receptor, metabotropic 1
mm10_v2_chr6_-_99028874_99028942	2.29808	Hoxa10	ENSMUST00000154163.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr2_+_68117713_68117713	2.26353	Hoxa10	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr2_-_79908389_79908403	2.24782	Hoxa10	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr8_+_58912257_58912257	2.22118	Hoxa10	ENSMUST00000160055.1|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr2_-_37647199_37647285	2.14384	Hoxa10	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr11_-_42000284_42000356	2.0612	Hoxa10	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr6_-_99044414_99044459	1.95852	Hoxa10	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr12_+_52516077_52516077	1.83926	Hoxa10	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr11_-_69822144_69822180	1.74241	Hoxa10	ENSMUST00000045771.6|Spem1|ENSMUSG00000041165.6|sperm maturation 1
mm10_v2_chr11_-_107348130_107348179	1.73957	Hoxa10	ENSMUST00000134763.1|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr4_-_119383732_119383780	1.69541	Hoxa10	ENSMUST00000044781.2|Ccdc30|ENSMUSG00000028637.9|coiled-coil domain containing 30 	ENSMUST00000084307.3|Ccdc30|ENSMUSG00000028637.9|coiled-coil domain containing 30
mm10_v2_chr6_+_54264839_54264863	1.57497	Hoxa10	ENSMUST00000146114.1|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr18_+_37513652_37513652	1.53978	Hoxa10	ENSMUST00000061405.4|Pcdhb21|ENSMUSG00000044022.4|protocadherin beta 21
mm10_v2_chr5_-_103100054_103100088	1.5057	Hoxa10	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr6_+_34354119_34354151	1.4744	Hoxa10	ENSMUST00000038406.6|Akr1b8|ENSMUSG00000029762.6|aldo-keto reductase family 1, member B8
mm10_v2_chr13_+_109926832_109926881	1.46608	Hoxa10	ENSMUST00000117420.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chrX_+_112604274_112604274	1.4037	Hoxa10	ENSMUST00000071814.6|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr9_-_39604124_39604403	1.39408	Hoxa10	ENSMUST00000042485.4|AW551984|ENSMUSG00000038112.9|expressed sequence AW551984 	ENSMUST00000141370.1|AW551984|ENSMUSG00000038112.9|expressed sequence AW551984
mm10_v2_chr1_+_59684949_59685023	1.33751	Hoxa10	ENSMUST00000027174.3|Nop58|ENSMUSG00000026020.3|NOP58 ribonucleoprotein
mm10_v2_chrM_+_3906_3926	1.3352	Hoxa10	ENSMUST00000082396.1|mt-Nd2|ENSMUSG00000064345.1|mitochondrially encoded NADH dehydrogenase 2
mm10_v2_chr10_-_29144194_29144194	1.31634	Hoxa10	ENSMUST00000070359.2|Gm9996|ENSMUSG00000056316.2|predicted gene 9996
mm10_v2_chr8_-_54718664_54718689	1.30799	Hoxa10	ENSMUST00000144711.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000093510.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chrX_+_112615301_112615301	1.29029	Hoxa10	ENSMUST00000122805.1|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr4_-_109202217_109202272	1.2896	Hoxa10	ENSMUST00000160774.1|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000030288.7|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000162787.2|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9
mm10_v2_chr1_-_156939626_156939657	1.27527	Hoxa10	ENSMUST00000063199.6|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000027886.7|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000172057.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr17_-_81649607_81649607	1.25871	Hoxa10	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr13_-_74376566_74376566	1.23129	Hoxa10	ENSMUST00000091481.2|Zfp72|ENSMUSG00000069184.2|zinc finger protein 72
mm10_v2_chr6_-_56901870_56901891	1.19968	Hoxa10	ENSMUST00000101367.2|Nt5c3|ENSMUSG00000029780.8|5'-nucleotidase, cytosolic III
mm10_v2_chr3_+_26331150_26331150	1.17037	Hoxa10	ENSMUST00000099182.2|A830092H15Rik|ENSMUSG00000074664.2|RIKEN cDNA A830092H15 gene
mm10_v2_chr18_+_37518341_37518359	1.1595	Hoxa10	ENSMUST00000097609.1|Pcdhb22|ENSMUSG00000073591.3|protocadherin beta 22
mm10_v2_chr13_-_92030897_92030908	1.11441	Hoxa10	ENSMUST00000149630.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr2_-_114201416_114201469	1.09498	Hoxa10	ENSMUST00000050668.3|Zfp770|ENSMUSG00000040321.3|zinc finger protein 770
mm10_v2_chr13_+_24614608_24614634	1.0419	Hoxa10	ENSMUST00000091694.3|Fam65b|ENSMUSG00000036006.13|family with sequence similarity 65, member B
mm10_v2_chr3_+_136670076_136670186	1.04091	Hoxa10	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr6_+_36388055_36388084	1.03374	Hoxa10	ENSMUST00000172278.1|Chrm2|ENSMUSG00000045613.3|cholinergic receptor, muscarinic 2, cardiac
mm10_v2_chr11_+_87109221_87109239	1.02874	Hoxa10	ENSMUST00000020794.5|Ska2|ENSMUSG00000020492.5|spindle and kinetochore associated complex subunit 2
mm10_v2_chr11_-_110168073_110168196	1.00563	Hoxa10	ENSMUST00000044850.3|Abca9|ENSMUSG00000041797.7|ATP-binding cassette, sub-family A (ABC1), member 9
mm10_v2_chr8_+_46492789_46492832	0.990387	Hoxa10	ENSMUST00000110371.1|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr3_-_59262825_59262851	0.944208	Hoxa10	ENSMUST00000050360.7|P2ry12|ENSMUSG00000036353.7|purinergic receptor P2Y, G-protein coupled 12
mm10_v2_chr11_+_44617310_44617336	0.939244	Hoxa10	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr18_-_43477764_43477836	0.914597	Hoxa10	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr9_-_50739365_50739517	0.912039	Hoxa10	ENSMUST00000117093.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000121634.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr5_+_121802230_121802230	0.899177	Hoxa10	ENSMUST00000162995.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr10_+_29143996_29144126	0.895008	Hoxa10	ENSMUST00000092629.2|Soga3|ENSMUSG00000038916.6|SOGA family member 3
mm10_v2_chr6_-_122856151_122856163	0.870021	Hoxa10	ENSMUST00000042081.8|C3ar1|ENSMUSG00000040552.8|complement component 3a receptor 1
mm10_v2_chr18_-_12860197_12860251	0.867911	Hoxa10	ENSMUST00000124570.1|Osbpl1a|ENSMUSG00000044252.11|oxysterol binding protein-like 1A
mm10_v2_chr12_+_55089202_55089202	0.857771	Hoxa10	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr17_-_6079693_6079760	0.856461	Hoxa10	ENSMUST00000024570.5|Serac1|ENSMUSG00000015659.6|serine active site containing 1 	ENSMUST00000097432.3|Serac1|ENSMUSG00000015659.6|serine active site containing 1
mm10_v2_chr1_+_179961110_179961110	0.829492	Hoxa10	ENSMUST00000076687.5|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000097450.3|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr8_+_93810832_93810843	0.826924	Hoxa10	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr10_-_111997204_111997279	0.825694	Hoxa10	ENSMUST00000074805.5|Glipr1|ENSMUSG00000056888.5|GLI pathogenesis-related 1 (glioma)
mm10_v2_chr10_-_56228636_56228695	0.810544	Hoxa10	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr4_+_43406435_43406615	0.768237	Hoxa10	ENSMUST00000098106.2|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2 	ENSMUST00000139198.1|Rusc2|ENSMUSG00000035969.9|RUN and SH3 domain containing 2
mm10_v2_chr3_-_94436574_94436616	0.768236	Hoxa10	ENSMUST00000029787.4|Oaz3|ENSMUSG00000028141.4|ornithine decarboxylase antizyme 3
mm10_v2_chrM_+_14138_14154	0.742827	Hoxa10	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chr1_+_74713551_74713574	0.729482	Hoxa10	ENSMUST00000027356.5|Cyp27a1|ENSMUSG00000026170.5|cytochrome P450, family 27, subfamily a, polypeptide 1
mm10_v2_chr12_+_55239326_55239326	0.723044	Hoxa10	ENSMUST00000164243.1|Srp54c|ENSMUSG00000021020.9|signal recognition particle 54C
mm10_v2_chr5_+_105415738_105415849	0.720472	Hoxa10	ENSMUST00000112707.1|Lrrc8b|ENSMUSG00000070639.4|leucine rich repeat containing 8 family, member B
mm10_v2_chr1_-_125913101_125913118	0.709619	Hoxa10	ENSMUST00000161361.1|Lypd1|ENSMUSG00000026344.3|Ly6/Plaur domain containing 1
mm10_v2_chr13_-_90089060_90089092	0.709278	Hoxa10	ENSMUST00000161396.1|Xrcc4|ENSMUSG00000021615.7|X-ray repair complementing defective repair in Chinese hamster cells 4
mm10_v2_chrX_-_136741155_136741352	0.69992	Hoxa10	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr6_+_6955993_6956049	0.699716	Hoxa10	ENSMUST00000040826.5|Acn9|ENSMUSG00000042505.6|ACN9 homolog (S. cerevisiae)
mm10_v2_chr11_-_17953861_17953897	0.66266	Hoxa10	ENSMUST00000076661.6|Etaa1|ENSMUSG00000016984.7|Ewing's tumor-associated antigen 1
mm10_v2_chr2_-_77946331_77946373	0.655662	Hoxa10	ENSMUST00000111821.2|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000111818.1|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr11_-_78984831_78984924	0.652452	Hoxa10	ENSMUST00000073001.4|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9 	ENSMUST00000108269.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr1_+_179960472_179960585	0.636913	Hoxa10	ENSMUST00000097453.2|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000111117.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr11_-_78984946_78984957	0.612288	Hoxa10	ENSMUST00000108268.3|Lgals9|ENSMUSG00000001123.9|lectin, galactose binding, soluble 9
mm10_v2_chr8_+_71597648_71597675	0.601625	Hoxa10	ENSMUST00000143662.1|Fam129c|ENSMUSG00000043243.9|family with sequence similarity 129, member C
mm10_v2_chr5_+_121749196_121749196	0.600981	Hoxa10	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr5_-_118244861_118245116	0.570711	Hoxa10	ENSMUST00000117177.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000133372.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000154786.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000121369.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2
mm10_v2_chrX_+_56609843_56609864	0.5685	Hoxa10	ENSMUST00000077741.5|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6 	ENSMUST00000114784.2|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm10_v2_chr12_+_10390756_10390836	0.564334	Hoxa10	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr8_+_12984246_12984330	0.559916	Hoxa10	ENSMUST00000110873.3|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like 	ENSMUST00000173006.1|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like 	ENSMUST00000145067.1|Mcf2l|ENSMUSG00000031442.14|mcf.2 transforming sequence-like
mm10_v2_chr1_-_140183404_140183415	0.550217	Hoxa10	ENSMUST00000066859.6|Cfh|ENSMUSG00000026365.9|complement component factor h 	ENSMUST00000111976.2|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr5_+_121777929_121777929	0.530379	Hoxa10	ENSMUST00000160821.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr19_+_4711153_4711258	0.502357	Hoxa10	ENSMUST00000008991.6|Sptbn2|ENSMUSG00000067889.4|spectrin beta, non-erythrocytic 2
mm10_v2_chr2_-_77946375_77946392	0.477226	Hoxa10	ENSMUST00000065889.3|Cwc22|ENSMUSG00000027014.8|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr2_+_15049395_15049447	0.476449	Hoxa10	ENSMUST00000017562.6|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chrX_+_96455359_96455411	0.47394	Hoxa10	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr6_-_3494587_3494598	0.459565	Hoxa10	ENSMUST00000049985.8|Hepacam2|ENSMUSG00000044156.8|HEPACAM family member 2
mm10_v2_chr10_-_29362012_29362029	0.457546	Hoxa10	ENSMUST00000161508.1|Rnf146|ENSMUSG00000038876.5|ring finger protein 146
mm10_v2_chr6_+_59208870_59208958	0.456335	Hoxa10	ENSMUST00000062626.3|Tigd2|ENSMUSG00000049232.3|tigger transposable element derived 2
mm10_v2_chr9_-_96478660_96478675	0.439055	Hoxa10	ENSMUST00000057500.4|Rnf7|ENSMUSG00000051234.5|ring finger protein 7
mm10_v2_chr7_-_73537621_73537766	0.438643	Hoxa10	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr13_+_18717289_18717316	0.426625	Hoxa10	ENSMUST00000072961.4|Vps41|ENSMUSG00000041236.7|vacuolar protein sorting 41 (yeast)
mm10_v2_chr17_+_29093763_29093781	0.421595	Hoxa10	ENSMUST00000023829.6|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr2_-_34755229_34755252	0.42128	Hoxa10	ENSMUST00000102800.1|Gapvd1|ENSMUSG00000026867.12|GTPase activating protein and VPS9 domains 1
mm10_v2_chr1_+_193173469_193173595	0.402165	Hoxa10	ENSMUST00000161235.1|A130010J15Rik|ENSMUSG00000079144.6|RIKEN cDNA A130010J15 gene 	ENSMUST00000110831.2|A130010J15Rik|ENSMUSG00000079144.6|RIKEN cDNA A130010J15 gene 	ENSMUST00000178744.1|A130010J15Rik|ENSMUSG00000079144.6|RIKEN cDNA A130010J15 gene
mm10_v2_chr5_-_131616599_131616611	0.378404	Hoxa10	ENSMUST00000161804.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr11_+_71749914_71749937	0.364296	Hoxa10	ENSMUST00000150531.1|Wscd1|ENSMUSG00000020811.10|WSC domain containing 1
mm10_v2_chr2_+_61578549_61578617	0.329574	Hoxa10	ENSMUST00000112502.1|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator 	ENSMUST00000078074.2|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator
mm10_v2_chr16_+_44394771_44394804	0.308839	Hoxa10	ENSMUST00000099742.2|Wdr52|ENSMUSG00000071550.7|WD repeat domain 52
mm10_v2_chr10_-_116549101_116549163	0.30322	Hoxa10	ENSMUST00000164088.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr3_-_123672321_123672400	0.298482	Hoxa10	ENSMUST00000172537.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 	ENSMUST00000029602.6|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chr8_-_94098811_94098811	0.296004	Hoxa10	ENSMUST00000034206.4|Bbs2|ENSMUSG00000031755.5|Bardet-Biedl syndrome 2 (human)
mm10_v2_chr1_-_140183283_140183332	0.277213	Hoxa10	ENSMUST00000111977.1|Cfh|ENSMUSG00000026365.9|complement component factor h
mm10_v2_chr9_+_58582397_58582436	0.258227	Hoxa10	ENSMUST00000176557.1|Nptn|ENSMUSG00000032336.11|neuroplastin 	ENSMUST00000114121.4|Nptn|ENSMUSG00000032336.11|neuroplastin 	ENSMUST00000177064.1|Nptn|ENSMUSG00000032336.11|neuroplastin
mm10_v2_chr2_+_177508570_177508570	0.254166	Hoxa10	ENSMUST00000108940.2|Gm14403|ENSMUSG00000094786.1|predicted gene 14403
mm10_v2_chr19_+_11965817_11965887	0.253714	Hoxa10	ENSMUST00000025590.9|Osbp|ENSMUSG00000024687.10|oxysterol binding protein
mm10_v2_chr18_+_37496997_37496997	0.243247	Hoxa10	ENSMUST00000059571.5|Pcdhb19|ENSMUSG00000043313.5|protocadherin beta 19
mm10_v2_chr13_+_65512678_65512678	0.235474	Hoxa10	ENSMUST00000081471.2|Gm10139|ENSMUSG00000063905.2|predicted gene 10139
mm10_v2_chr13_+_58281183_58281196	0.19066	Hoxa10	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr8_+_85432686_85432686	0.181848	Hoxa10	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr17_+_36958571_36958611	0.172125	Hoxa10	ENSMUST00000040177.6|Znrd1as|ENSMUSG00000036214.7|Znrd1 antisense
mm10_v2_chr1_+_127729405_127729418	0.155273	Hoxa10	ENSMUST00000038006.6|Acmsd|ENSMUSG00000026348.6|amino carboxymuconate semialdehyde decarboxylase
mm10_v2_chr14_-_89898466_89898466	0.145716	Hoxa10	ENSMUST00000081204.4|Gm10110|ENSMUSG00000062093.4|predicted gene 10110
mm10_v2_chrX_+_103356464_103356488	0.130502	Hoxa10	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr19_-_45591820_45591878	0.125273	Hoxa10	ENSMUST00000160003.1|Fbxw4|ENSMUSG00000040913.4|F-box and WD-40 domain protein 4 	ENSMUST00000162879.1|Fbxw4|ENSMUSG00000040913.4|F-box and WD-40 domain protein 4
mm10_v2_chr8_+_46986913_46986962	0.115167	Hoxa10	ENSMUST00000039840.7|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6 	ENSMUST00000119686.1|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm10_v2_chr17_-_15566421_15566421	0.112045	Hoxa10	ENSMUST00000178455.1|Gm6686|ENSMUSG00000095920.1|predicted pseudogene 6686
mm10_v2_chr2_-_73625731_73625744	0.104413	Hoxa10	ENSMUST00000070579.6|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr9_-_119825456_119825456	0.103206	Hoxa10	ENSMUST00000070617.7|Scn11a|ENSMUSG00000034115.9|sodium channel, voltage-gated, type XI, alpha
mm10_v2_chr3_+_60877002_60877017	0.0900737	Hoxa10	ENSMUST00000099086.2|Gm8325|ENSMUSG00000027694.7|predicted pseudogene 8325
mm10_v2_chr2_+_83812567_83812643	0.0823871	Hoxa10	ENSMUST00000051454.3|Fam171b|ENSMUSG00000048388.3|family with sequence similarity 171, member B
mm10_v2_chrX_+_99042581_99042613	0.0778255	Hoxa10	ENSMUST00000036606.7|Stard8|ENSMUSG00000031216.7|START domain containing 8
mm10_v2_chr16_+_32419696_32419753	0.0774122	Hoxa10	ENSMUST00000014220.8|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2 	ENSMUST00000080316.7|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2
mm10_v2_chrM_-_14060_14074	0.0752041	Hoxa10	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr12_+_84361968_84362018	0.0713097	Hoxa10	ENSMUST00000021661.6|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr9_-_96478596_96478622	0.0643128	Hoxa10	ENSMUST00000071301.4|Rnf7|ENSMUSG00000051234.5|ring finger protein 7
mm10_v2_chr2_-_34826187_34826240	0.058045	Hoxa10	ENSMUST00000113075.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000113080.2|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000091020.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr18_-_3281712_3281747	0.0485298	Hoxa10	ENSMUST00000182204.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000154705.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000182833.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000151084.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr19_+_24875679_24875689	0.0465791	Hoxa10	ENSMUST00000073080.5|Gm10053|ENSMUSG00000058927.5|predicted gene 10053
mm10_v2_chr17_-_33760451_33760530	0.0434417	Hoxa10	ENSMUST00000057373.7|Rab11b|ENSMUSG00000077450.6|RAB11B, member RAS oncogene family
mm10_v2_chr7_+_29238434_29238456	0.0431971	Hoxa10	ENSMUST00000108237.1|Yif1b|ENSMUSG00000030588.5|Yip1 interacting factor homolog B (S. cerevisiae)
mm10_v2_chr4_+_42629719_42629719	0.0293258	Hoxa10	ENSMUST00000166898.2|Gm2564|ENSMUSG00000091938.2|predicted gene 2564
mm10_v2_chr15_+_59374198_59374279	0.00390582	Hoxa10	ENSMUST00000079703.3|Nsmce2|ENSMUSG00000059586.3|non-SMC element 2 homolog (MMS21, S. cerevisiae) 	ENSMUST00000168722.1|Nsmce2|ENSMUSG00000059586.3|non-SMC element 2 homolog (MMS21, S. cerevisiae)
