mm10_v2_chr4_-_14621805_14621819	11.493	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr2_+_65620829_65620857	8.27858	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr15_-_67113909_67113992	7.71024	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000092640.5|St3gal1|ENSMUSG00000013846.9|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm10_v2_chr9_+_53771499_53771535	6.09721	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr13_-_102906046_102906111	5.85617	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr4_-_14621494_14621506	4.48338	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr4_+_102589687_102589843	4.47452	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr6_+_8948608_8948619	4.10688	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr4_-_14621669_14621786	3.94979	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr13_-_102905740_102905814	3.78601	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr15_+_16778101_16778101	3.36787	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000026432.6|Cdh9|ENSMUSG00000025370.6|cadherin 9
mm10_v2_chr14_+_4198185_4198185	3.36591	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180184.1|Gm2974|ENSMUSG00000079391.4|predicted gene 2974
mm10_v2_chr4_+_145585166_145585211	3.00527	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105739.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212 	ENSMUST00000119718.1|Gm13212|ENSMUSG00000078502.4|predicted gene 13212
mm10_v2_chr7_-_25005895_25005937	2.93373	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000102858.3|Atp1a3|ENSMUSG00000040907.9|ATPase, Na+/K+ transporting, alpha 3 polypeptide 	ENSMUST00000080882.6|Atp1a3|ENSMUSG00000040907.9|ATPase, Na+/K+ transporting, alpha 3 polypeptide
mm10_v2_chr15_-_64922290_64922315	2.91307	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023007.5|Adcy8|ENSMUSG00000022376.7|adenylate cyclase 8
mm10_v2_chr3_+_55461758_55461961	2.8242	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000070418.4|Dclk1|ENSMUSG00000027797.9|doublecortin-like kinase 1
mm10_v2_chr9_+_119063429_119063467	2.7509	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chr5_-_118244861_118245116	2.74144	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000117177.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000133372.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000154786.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2 	ENSMUST00000121369.1|Rnft2|ENSMUSG00000032850.10|ring finger protein, transmembrane 2
mm10_v2_chr19_-_29334646_29334670	2.68387	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000044143.5|Rln1|ENSMUSG00000039097.5|relaxin 1
mm10_v2_chr5_+_37185897_37185897	2.51378	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000094840.3|Gm1043|ENSMUSG00000070823.3|predicted gene 1043
mm10_v2_chr14_+_5517172_5517172	2.39332	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178220.1|Gm3488|ENSMUSG00000095295.2|predicted gene, 3488
mm10_v2_chr14_+_5164535_5164535	2.39332	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179659.1|Gm3317|ENSMUSG00000095912.1|predicted gene 3317
mm10_v2_chr13_-_58354862_58354862	2.35134	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr5_+_26817357_26817428	2.296	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000071500.6|Dpp6|ENSMUSG00000061576.9|dipeptidylpeptidase 6
mm10_v2_chr10_+_94575257_94575295	2.23184	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000121471.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr14_-_6874257_6874257	2.13695	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179374.1|Gm3629|ENSMUSG00000093898.1|predicted gene 3629 	ENSMUST00000178298.1|Gm3667|ENSMUSG00000090691.2|predicted gene 3667
mm10_v2_chr14_-_6266620_6266620	2.10886	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000096172.5|Gm3411|ENSMUSG00000079396.3|predicted gene 3411
mm10_v2_chr14_+_3667518_3667518	2.07402	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112801.3|Gm3020|ENSMUSG00000079402.3|predicted gene 3020
mm10_v2_chr14_+_4430992_4430992	2.05587	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000164603.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173 	ENSMUST00000166848.1|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr8_-_109251698_109251728	2.04957	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000079189.3|4922502B01Rik|ENSMUSG00000057387.3|RIKEN cDNA 4922502B01 gene
mm10_v2_chr10_+_116143881_116143903	2.0432	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105271.2|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr4_-_147809788_147809840	2.03358	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105734.3|Gm13157|ENSMUSG00000078495.4|predicted gene 13157 	ENSMUST00000176201.1|Gm20707|ENSMUSG00000093594.1|predicted gene 20707
mm10_v2_chr3_+_121953213_121953295	2.00976	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000037958.7|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29 	ENSMUST00000128366.1|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29
mm10_v2_chr14_-_7473073_7473073	2.00735	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167833.2|Gm3752|ENSMUSG00000091617.2|predicted gene 3752
mm10_v2_chr14_+_4126066_4126066	2.00142	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167397.2|Gm8108|ENSMUSG00000091563.2|predicted gene 8108
mm10_v2_chr14_+_3348089_3348089	1.97973	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178722.1|Gm2956|ENSMUSG00000096574.1|predicted gene 2956
mm10_v2_chr14_+_4871156_4871156	1.94953	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000166410.2|Gm3264|ENSMUSG00000094132.1|predicted gene 3264
mm10_v2_chr14_+_3428103_3428103	1.9008	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178060.1|Gm3005|ENSMUSG00000095195.1|predicted gene 3005
mm10_v2_chr14_+_3825596_3825596	1.85778	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178256.1|Gm3002|ENSMUSG00000096793.1|predicted gene 3002
mm10_v2_chr14_+_4741737_4741737	1.85515	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178748.1|Gm3252|ENSMUSG00000094628.1|predicted gene 3252
mm10_v2_chr14_-_5863663_5863663	1.8538	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178594.1|Gm8237|ENSMUSG00000090707.2|predicted gene 8237
mm10_v2_chr4_+_103143052_103143071	1.84522	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106855.1|Mier1|ENSMUSG00000028522.10|mesoderm induction early response 1 homolog (Xenopus laevis
mm10_v2_chr2_+_125136692_125136769	1.81528	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr14_+_4514758_4514758	1.81405	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112776.2|Gm3173|ENSMUSG00000079386.2|predicted gene 3173
mm10_v2_chr14_-_19569553_19569553	1.80063	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112595.2|Gm2237|ENSMUSG00000093979.1|predicted gene 2237
mm10_v2_chr14_-_6411578_6411578	1.7716	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179312.1|Gm3591|ENSMUSG00000096904.1|predicted gene 3591
mm10_v2_chr2_-_33718789_33718899	1.7395	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130532.1|9430024E24Rik|ENSMUSG00000085463.1|RIKEN cDNA 9430024E24 gene
mm10_v2_chr6_-_136941887_136941911	1.65376	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111891.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr14_+_4665094_4665094	1.56299	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000169675.2|Gm3239|ENSMUSG00000090872.2|predicted gene 3239
mm10_v2_chr12_+_112760652_112760659	1.51952	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000063888.3|Pld4|ENSMUSG00000052160.6|phospholipase D family, member 4
mm10_v2_chr4_+_146610961_146610961	1.49984	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130825.1|Gm13248|ENSMUSG00000063245.5|predicted gene 13248
mm10_v2_chr1_+_72284367_72284419	1.49922	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027380.5|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169 	ENSMUST00000141783.1|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169
mm10_v2_chr2_-_125782834_125782870	1.42982	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000053699.6|Secisbp2l|ENSMUSG00000035093.10|SECIS binding protein 2-like
mm10_v2_chr6_+_34029421_34029456	1.41107	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000070189.3|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing 	ENSMUST00000101564.2|Lrguk|ENSMUSG00000056215.6|leucine-rich repeats and guanylate kinase domain containing
mm10_v2_chr14_-_6741430_6741430	1.3918	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000100904.4|Gm3636|ENSMUSG00000091754.2|predicted gene 3636
mm10_v2_chr6_+_37870786_37870882	1.34954	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr4_+_147132038_147132038	1.33734	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000084149.3|Gm13139|ENSMUSG00000067916.3|predicted gene 13139
mm10_v2_chr14_+_69347587_69347587	1.31733	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000064831.5|Entpd4|ENSMUSG00000095463.2|ectonucleoside triphosphate diphosphohydrolase 4
mm10_v2_chr15_-_37459327_37459380	1.28556	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119730.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta 	ENSMUST00000120746.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr6_-_136941694_136941756	1.2767	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032344.5|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr6_-_136941494_136941505	1.26612	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111892.1|Arhgdib|ENSMUSG00000030220.7|Rho, GDP dissociation inhibitor (GDI) beta
mm10_v2_chr18_+_86711520_86711650	1.20988	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000122464.1|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr8_+_34054622_34054647	1.19342	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000149618.1|Gm9951|ENSMUSG00000054618.8|predicted gene 9951
mm10_v2_chrM_+_10167_10167	1.16307	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr6_+_124304646_124304671	1.13573	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr18_+_86711059_86711110	1.09476	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000068423.3|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr13_+_77135513_77135583	1.09205	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000168779.1|2210408I21Rik|ENSMUSG00000071252.5|RIKEN cDNA 2210408I21 gene
mm10_v2_chrX_-_160138375_160138435	1.07486	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033662.8|Pdha1|ENSMUSG00000031299.10|pyruvate dehydrogenase E1 alpha 1
mm10_v2_chr18_-_43477764_43477836	1.04857	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr18_+_12741324_12741355	0.992832	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000115857.2|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) 	ENSMUST00000121018.1|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) 	ENSMUST00000119108.1|Cabyr|ENSMUSG00000024430.7|calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
mm10_v2_chr10_+_115384951_115385021	0.98562	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000036044.8|Zfc3h1|ENSMUSG00000034163.10|zinc finger, C3H1-type containing
mm10_v2_chr4_+_108719649_108719649	0.928913	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178992.1|3110021N24Rik|ENSMUSG00000094958.1|RIKEN cDNA 3110021N24 gene
mm10_v2_chr1_-_24612700_24612700	0.91284	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
mm10_v2_chr14_+_57524734_57524829	0.909942	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000089494.4|Il17d|ENSMUSG00000050222.10|interleukin 17D
mm10_v2_chr16_-_42340595_42340651	0.892965	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000102817.4|Gap43|ENSMUSG00000047261.9|growth associated protein 43
mm10_v2_chr19_+_23723279_23723279	0.873737	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr18_-_46311891_46311928	0.841665	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000072835.6|Ccdc112|ENSMUSG00000071855.4|coiled-coil domain containing 112
mm10_v2_chr12_+_24974914_24974948	0.801124	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000066652.5|Kidins220|ENSMUSG00000036333.10|kinase D-interacting substrate 220
mm10_v2_chr2_+_126556128_126556128	0.801105	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141482.2|Slc27a2|ENSMUSG00000027359.10|solute carrier family 27 (fatty acid transporter), member 2
mm10_v2_chr9_+_76014855_76015055	0.800436	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000008052.6|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000183425.1|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000183979.1|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 	ENSMUST00000117981.2|Hmgcll1|ENSMUSG00000007908.8|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm10_v2_chr2_+_3424123_3424207	0.798523	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061852.5|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 	ENSMUST00000100463.3|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 	ENSMUST00000102988.3|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 	ENSMUST00000115066.1|Dclre1c|ENSMUSG00000026648.12|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)
mm10_v2_chr11_-_107337556_107337637	0.776081	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000040380.6|Pitpnc1|ENSMUSG00000040430.12|phosphatidylinositol transfer protein, cytoplasmic 1
mm10_v2_chr3_+_28263205_28263215	0.757339	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr5_-_62765618_62765656	0.743602	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr9_+_40269202_40269265	0.732766	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000114956.3|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta 	ENSMUST00000049941.5|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta
mm10_v2_chr9_-_22259887_22259949	0.71829	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000086281.4|Zfp599|ENSMUSG00000062794.8|zinc finger protein 599
mm10_v2_chr9_+_40269273_40269303	0.710751	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000176185.1|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta
mm10_v2_chrM_+_9870_9885	0.707342	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000084013.1|mt-Nd4l|ENSMUSG00000065947.3|mitochondrially encoded NADH dehydrogenase 4L
mm10_v2_chr4_-_149126688_149126763	0.692303	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000030815.2|Cort|ENSMUSG00000028971.4|cortistatin
mm10_v2_chrX_-_143933204_143933311	0.649635	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr9_-_75597643_75597656	0.633906	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000164100.1|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chrX_-_143933089_143933142	0.631759	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr9_-_55919605_55919605	0.611988	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000037408.8|Scaper|ENSMUSG00000034007.9|S phase cyclin A-associated protein in the ER
mm10_v2_chr16_+_58408443_58408523	0.589221	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr18_+_4920509_4920586	0.573723	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000126977.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr9_-_14381242_14381242	0.572146	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167549.1|Endod1|ENSMUSG00000037419.8|endonuclease domain containing 1
mm10_v2_chr12_+_10390756_10390836	0.5717	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr12_+_71831064_71831178	0.566674	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr2_+_69897220_69897247	0.555645	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr18_-_64516547_64516565	0.540558	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000025483.9|Nars|ENSMUSG00000024587.9|asparaginyl-tRNA synthetase
mm10_v2_chr5_+_121397936_121398004	0.533697	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr4_+_95557494_95557544	0.526376	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000079223.4|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing 	ENSMUST00000177394.1|Fggy|ENSMUSG00000028573.12|FGGY carbohydrate kinase domain containing
mm10_v2_chr3_+_55782500_55782521	0.52074	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr2_+_68104671_68104671	0.519831	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000042456.3|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr16_-_16359016_16359040	0.518647	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023477.7|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000096229.3|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000115749.1|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like
mm10_v2_chr12_+_72441852_72441866	0.514188	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr10_-_63927434_63927434	0.513213	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000079279.3|Gm10118|ENSMUSG00000062561.3|predicted gene 10118
mm10_v2_chrX_-_134111852_134111873	0.501637	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033610.6|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr5_+_121749196_121749196	0.488029	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chrX_-_139871637_139871677	0.479411	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033811.7|Morc4|ENSMUSG00000031434.9|microrchidia 4 	ENSMUST00000087401.5|Morc4|ENSMUSG00000031434.9|microrchidia 4
mm10_v2_chr14_-_15438974_15439002	0.464413	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055211.4|Lrrc3b|ENSMUSG00000045201.5|leucine rich repeat containing 3B
mm10_v2_chr1_-_174921813_174921827	0.45272	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055294.3|Grem2|ENSMUSG00000050069.3|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm10_v2_chrX_-_106221145_106221169	0.452544	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113495.2|Taf9b|ENSMUSG00000047242.8|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr9_-_39603635_39603687	0.450189	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119722.1|AW551984|ENSMUSG00000038112.9|expressed sequence AW551984
mm10_v2_chr12_+_72441933_72441970	0.423204	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr7_+_39449479_39449523	0.406931	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000061201.8|Zfp939|ENSMUSG00000030424.9|zinc finger protein 939
mm10_v2_chr4_+_15881255_15881272	0.399899	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr8_+_107031218_107031229	0.397861	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000034388.9|Vps4a|ENSMUSG00000031913.9|vacuolar protein sorting 4a (yeast)
mm10_v2_chr5_-_34660068_34660148	0.392755	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000041364.9|Nop14|ENSMUSG00000036693.9|NOP14 nucleolar protein
mm10_v2_chr10_-_62379852_62379917	0.392339	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000143236.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000133429.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000132926.1|Hk1|ENSMUSG00000037012.12|hexokinase 1 	ENSMUST00000116238.2|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr9_+_113812547_113812621	0.391396	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr2_-_71367749_71367797	0.388138	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000151937.1|Slc25a12|ENSMUSG00000027010.10|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm10_v2_chr14_-_31417666_31417678	0.382644	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000100730.3|Sh3bp5|ENSMUSG00000021892.8|SH3-domain binding protein 5 (BTK-associated)
mm10_v2_chr12_-_79190955_79190976	0.377329	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085254.6|Rdh11|ENSMUSG00000066441.8|retinol dehydrogenase 11
mm10_v2_chr13_-_95250166_95250336	0.370537	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000162153.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000160957.2|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000159598.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000162412.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B
mm10_v2_chr9_+_32224457_32224592	0.356926	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000183121.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr17_-_33033367_33033411	0.356793	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000087654.4|Zfp763|ENSMUSG00000067430.7|zinc finger protein 763
mm10_v2_chr2_-_5063996_5064048	0.356711	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000114996.1|Optn|ENSMUSG00000026672.5|optineurin
mm10_v2_chr12_-_91849081_91849157	0.355276	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000167466.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000021347.5|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000178462.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans)
mm10_v2_chrX_+_56346390_56346415	0.344713	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000101560.3|Zfp449|ENSMUSG00000073176.4|zinc finger protein 449
mm10_v2_chr11_-_98193260_98193298	0.344028	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr7_+_100159241_100159315	0.343989	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032967.3|Lipt2|ENSMUSG00000030725.3|lipoyl(octanoyl) transferase 2 (putative)
mm10_v2_chr2_-_73580288_73580353	0.333435	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000028515.3|Chrna1|ENSMUSG00000027107.3|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm10_v2_chr2_+_109917639_109917656	0.331444	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr2_+_121956651_121956664	0.330394	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110574.1|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr12_-_12940600_12940616	0.32576	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130990.1|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr12_+_116275386_116275386	0.325289	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000090195.4|Gm11027|ENSMUSG00000078984.1|predicted gene 11027
mm10_v2_chr12_-_85824506_85824555	0.324953	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000021676.5|0610007P14Rik|ENSMUSG00000021252.5|RIKEN cDNA 0610007P14 gene 	ENSMUST00000142331.1|0610007P14Rik|ENSMUSG00000021252.5|RIKEN cDNA 0610007P14 gene
mm10_v2_chr4_+_147492417_147492417	0.324574	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000105721.2|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr1_-_185329331_185329401	0.322558	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027921.4|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110975.1|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110974.3|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial
mm10_v2_chr14_-_104522615_104522707	0.320485	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr2_+_121956411_121956480	0.315519	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000110578.1|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr12_+_80644212_80644265	0.314611	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085245.5|Slc39a9|ENSMUSG00000048833.8|solute carrier family 39 (zinc transporter), member 9
mm10_v2_chr10_-_56228636_56228695	0.310968	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr5_+_31526989_31527034	0.310376	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000114533.2|Slc4a1ap|ENSMUSG00000029141.10|solute carrier family 4 (anion exchanger), member 1, adaptor protein 	ENSMUST00000117262.1|Slc4a1ap|ENSMUSG00000029141.10|solute carrier family 4 (anion exchanger), member 1, adaptor protein 	ENSMUST00000117319.1|Slc4a1ap|ENSMUSG00000029141.10|solute carrier family 4 (anion exchanger), member 1, adaptor protein
mm10_v2_chr15_-_103215285_103215366	0.305434	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr1_-_133661318_133661386	0.30217	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179598.1|Zbed6|ENSMUSG00000094410.1|zinc finger, BED domain containing 6 	ENSMUST00000027736.6|Zc3h11a|ENSMUSG00000026464.6|zinc finger CCCH type containing 11A
mm10_v2_chr13_+_83732438_83732566	0.30202	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000182701.1|C130071C03Rik|ENSMUSG00000050334.6|RIKEN cDNA C130071C03 gene
mm10_v2_chr11_+_121237216_121237289	0.294545	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000103015.3|Narf|ENSMUSG00000000056.7|nuclear prelamin A recognition factor
mm10_v2_chr7_+_12927410_12927439	0.294059	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000045870.4|2310014L17Rik|ENSMUSG00000033967.4|RIKEN cDNA 2310014L17 gene
mm10_v2_chr5_+_107497718_107497759	0.290018	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000112671.2|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr10_-_9901079_9901250	0.286567	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000141722.1|Stxbp5|ENSMUSG00000019790.10|syntaxin binding protein 5 (tomosyn)
mm10_v2_chr19_-_32196393_32196428	0.286049	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000151822.1|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chr7_-_38019505_38019552	0.284808	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr5_-_92348871_92348889	0.283088	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000038816.6|Cxcl10|ENSMUSG00000034855.7|chemokine (C-X-C motif) ligand 10 	ENSMUST00000118006.1|Cxcl10|ENSMUSG00000034855.7|chemokine (C-X-C motif) ligand 10
mm10_v2_chr8_+_40354303_40354303	0.275114	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000136835.1|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr5_-_106926245_106926321	0.266313	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000117588.1|Hfm1|ENSMUSG00000043410.10|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
mm10_v2_chr11_+_17257558_17257688	0.259195	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000000594.2|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor 	ENSMUST00000156784.1|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor
mm10_v2_chr8_+_82863351_82863397	0.246747	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chr12_-_80643799_80643857	0.240947	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000166931.1|Erh|ENSMUSG00000021131.7|enhancer of rudimentary homolog (Drosophila)
mm10_v2_chr2_-_104493690_104493753	0.231353	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111124.1|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr9_-_107872403_107872422	0.231353	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000183035.1|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr10_-_37138863_37138937	0.229515	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chrM_+_14138_14154	0.22301	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chr8_-_3694167_3694183	0.217291	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000005678.4|Fcer2a|ENSMUSG00000005540.9|Fc receptor, IgE, low affinity II, alpha polypeptide
mm10_v2_chr4_+_116596672_116596730	0.209111	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000051869.7|Ccdc17|ENSMUSG00000034035.12|coiled-coil domain containing 17
mm10_v2_chr10_-_79097560_79097614	0.207918	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039271.6|2610008E11Rik|ENSMUSG00000060301.5|RIKEN cDNA 2610008E11 gene
mm10_v2_chr17_-_78684262_78684352	0.20636	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000145480.1|Strn|ENSMUSG00000024077.9|striatin, calmodulin binding protein
mm10_v2_chr7_+_38183787_38183869	0.203956	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000067854.8|1600014C10Rik|ENSMUSG00000054676.9|RIKEN cDNA 1600014C10 gene 	ENSMUST00000177983.1|1600014C10Rik|ENSMUSG00000054676.9|RIKEN cDNA 1600014C10 gene
mm10_v2_chr19_+_41933464_41933540	0.203533	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000026154.7|Zdhhc16|ENSMUSG00000025157.7|zinc finger, DHHC domain containing 16
mm10_v2_chr11_+_86484647_86484716	0.201906	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020827.6|Rnft1|ENSMUSG00000020521.7|ring finger protein, transmembrane 1
mm10_v2_chr13_-_81710937_81711013	0.200159	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161920.1|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G 	ENSMUST00000048993.5|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G
mm10_v2_chr4_+_74242468_74242497	0.196263	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000077851.3|Kdm4c|ENSMUSG00000028397.7|lysine (K)-specific demethylase 4C
mm10_v2_chr11_+_88047302_88047373	0.190532	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139129.2|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr11_-_87359011_87359081	0.186036	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr7_-_45830776_45830944	0.182345	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000107723.2|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1 	ENSMUST00000131384.1|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1
mm10_v2_chr7_-_45103747_45103822	0.172223	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000003512.7|Fcgrt|ENSMUSG00000003420.7|Fc receptor, IgG, alpha chain transporter
mm10_v2_chr10_-_33951190_33951263	0.168203	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000048222.4|Zufsp|ENSMUSG00000039531.7|zinc finger with UFM1-specific peptidase domain
mm10_v2_chr4_+_105789869_105789869	0.167089	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000184254.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr1_+_63176818_63176919	0.155851	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000129339.1|Eef1b2|ENSMUSG00000025967.10|eukaryotic translation elongation factor 1 beta 2
mm10_v2_chr2_+_32606946_32606973	0.153283	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113290.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr10_-_20725023_20725078	0.149458	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr2_-_34826187_34826240	0.149336	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113075.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000113080.2|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000091020.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr10_-_86022325_86022325	0.149172	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000181665.1|A230060F14Rik|ENSMUSG00000097692.1|RIKEN cDNA A230060F14 gene
mm10_v2_chr13_+_90089705_90089762	0.147641	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000012566.8|Tmem167|ENSMUSG00000012422.8|transmembrane protein 167
mm10_v2_chr16_+_96145391_96145448	0.147608	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000023913.8|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein 	ENSMUST00000135448.1|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein
mm10_v2_chr5_+_3543812_3543853	0.146998	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr6_-_118479237_118479320	0.142634	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000161170.1|Zfp9|ENSMUSG00000072623.5|zinc finger protein 9
mm10_v2_chr2_+_32606979_32607057	0.142018	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113289.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 	ENSMUST00000095044.3|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chrX_+_103356464_103356488	0.139315	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr4_+_32623985_32624084	0.137786	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000108178.1|Casp8ap2|ENSMUSG00000028282.6|caspase 8 associated protein 2
mm10_v2_chr8_+_113635550_113635597	0.133934	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000179926.1|Mon1b|ENSMUSG00000078908.3|MON1 homolog b (yeast)
mm10_v2_chr2_+_36230426_36230491	0.13271	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr2_+_69897255_69897303	0.130035	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000131553.1|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr8_-_35495487_35495545	0.117086	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000033927.6|Eri1|ENSMUSG00000031527.6|exoribonuclease 1
mm10_v2_chr8_+_113635787_113635842	0.112532	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000035777.8|Mon1b|ENSMUSG00000078908.3|MON1 homolog b (yeast)
mm10_v2_chrX_+_134686519_134686536	0.110994	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000124226.2|Armcx4|ENSMUSG00000049804.9|armadillo repeat containing, X-linked 4
mm10_v2_chr1_+_85575676_85575676	0.10701	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000178024.1|G530012D18Rik|ENSMUSG00000094127.1|RIKEN cDNA G530012D1 gene
mm10_v2_chr7_-_126676357_126676383	0.102067	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000106371.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000106372.3|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1 	ENSMUST00000155419.1|Sult1a1|ENSMUSG00000030711.9|sulfotransferase family 1A, phenol-preferring, member 1
mm10_v2_chr6_+_66896397_66896479	0.0952092	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000043148.6|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114228.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114227.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114226.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114225.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114224.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr19_-_9559204_9559248	0.0915909	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000090527.3|Stxbp3b|ENSMUSG00000071640.2|syntaxin-binding protein 3B
mm10_v2_chr11_+_5520652_5520659	0.0865194	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000063084.9|Xbp1|ENSMUSG00000020484.12|X-box binding protein 1
mm10_v2_chr4_-_155645408_155645408	0.0862291	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000115821.2|Gm10563|ENSMUSG00000073682.3|predicted gene 10563
mm10_v2_chr5_+_107497762_107497802	0.084917	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000152474.1|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene 	ENSMUST00000060553.7|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr1_+_165461037_165461037	0.0841878	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027853.5|Mpc2|ENSMUSG00000026568.5|mitochondrial pyruvate carrier 2
mm10_v2_chr19_-_44107447_44107492	0.0834078	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000119591.1|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase 	ENSMUST00000026217.4|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase
mm10_v2_chr13_-_41847626_41847684	0.0783911	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000121404.1|Adtrp|ENSMUSG00000058022.7|androgen dependent TFPI regulating protein
mm10_v2_chr12_+_55303241_55303286	0.0702982	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000184766.1|1110008L16Rik|ENSMUSG00000021023.8|RIKEN cDNA 1110008L16 gene 	ENSMUST00000183475.1|1110008L16Rik|ENSMUSG00000021023.8|RIKEN cDNA 1110008L16 gene 	ENSMUST00000183654.1|1110008L16Rik|ENSMUSG00000021023.8|RIKEN cDNA 1110008L16 gene
mm10_v2_chr8_+_13869641_13869740	0.0698235	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000051870.7|Champ1|ENSMUSG00000047710.7|chromosome alignment maintaining phosphoprotein 1 	ENSMUST00000128557.1|Champ1|ENSMUSG00000047710.7|chromosome alignment maintaining phosphoprotein 1
mm10_v2_chr2_+_110597298_110597316	0.0662795	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr9_-_20959785_20959888	0.0652717	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000177754.1|Dnmt1|ENSMUSG00000004099.9|DNA methyltransferase (cytosine-5) 1
mm10_v2_chr2_-_34826071_34826087	0.0649312	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000113077.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000028220.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr10_-_8886033_8886076	0.0640274	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000015449.5|Sash1|ENSMUSG00000015305.5|SAM and SH3 domain containing 1
mm10_v2_chr11_+_51261719_51261731	0.0617248	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chr16_-_64771146_64771184	0.061694	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr9_-_85749308_85749356	0.0597444	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000039213.8|Ibtk|ENSMUSG00000035941.9|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm10_v2_chr9_-_113708209_113708259	0.0583946	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000111861.3|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein 	ENSMUST00000035086.6|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein
mm10_v2_chr13_+_67863324_67863328	0.0556096	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000078471.5|BC048507|ENSMUSG00000064063.5|cDNA sequence BC048507
mm10_v2_chrM_+_7005_7022	0.050408	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr19_+_8802486_8802530	0.0502821	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000172175.1|Zbtb3|ENSMUSG00000071661.6|zinc finger and BTB domain containing 3
mm10_v2_chr17_+_45734506_45734630	0.0498713	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr15_+_38661904_38661981	0.0494538	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000022904.6|Atp6v1c1|ENSMUSG00000022295.7|ATPase, H+ transporting, lysosomal V1 subunit C1
mm10_v2_chr18_-_56975333_56975376	0.0478455	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chrX_-_111536325_111536342	0.0436006	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000156639.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chrX_+_170009892_170009892	0.0386959	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000180251.1|Gm21887|ENSMUSG00000095562.1|predicted gene, 21887
mm10_v2_chr1_+_125676969_125677015	0.0319656	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000027581.6|Gpr39|ENSMUSG00000026343.6|G protein-coupled receptor 39
mm10_v2_chr6_+_145934113_145934136	0.02504	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000032383.7|Sspn|ENSMUSG00000030255.7|sarcospan
mm10_v2_chr14_-_75754475_75754563	0.0249982	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000049168.7|Cog3|ENSMUSG00000034893.7|component of oligomeric golgi complex 3
mm10_v2_chr16_+_11406618_11406675	0.0207659	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr4_-_155785864_155785880	0.0181049	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000097742.2|Tmem88b|ENSMUSG00000073680.2|transmembrane protein 88B
mm10_v2_chr17_+_29274078_29274129	0.0180042	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000149405.2|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004
mm10_v2_chr5_-_121527186_121527258	0.0133188	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000152270.1|Mapkapk5|ENSMUSG00000029454.9|MAP kinase-activated protein kinase 5
mm10_v2_chr5_-_38480131_38480306	0.0110791	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000143758.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9 	ENSMUST00000067886.5|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chr1_+_46066738_46066844	0.00195506	Hoxc4_Arx_Otp_Esx1_Phox2b	ENSMUST00000069293.7|Dnah7b|ENSMUSG00000041144.9|dynein, axonemal, heavy chain 7B
