mm10_v2_chr6_-_23248264_23248390	17.9322	Onecut1_Cux2	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr10_-_64090265_64090297	8.03093	Onecut1_Cux2	ENSMUST00000105439.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr14_+_68083853_68083870	7.88083	Onecut1_Cux2	ENSMUST00000022639.7|Nefl|ENSMUSG00000022055.7|neurofilament, light polypeptide
mm10_v2_chr6_+_4755327_4755357	7.32676	Onecut1_Cux2	ENSMUST00000176551.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10
mm10_v2_chr10_-_64090241_64090262	7.0406	Onecut1_Cux2	ENSMUST00000133588.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr12_+_72441933_72441970	5.33796	Onecut1_Cux2	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr12_+_72441852_72441866	3.87779	Onecut1_Cux2	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chrX_-_43274786_43274786	3.43096	Onecut1_Cux2	ENSMUST00000016294.7|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr3_+_102010138_102010171	3.17871	Onecut1_Cux2	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr1_-_158958367_158958367	3.15191	Onecut1_Cux2	ENSMUST00000159861.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr3_+_125404072_125404131	2.72972	Onecut1_Cux2	ENSMUST00000173932.1|Ndst4|ENSMUSG00000027971.10|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm10_v2_chr3_+_125404292_125404340	2.54051	Onecut1_Cux2	ENSMUST00000144344.1|Ndst4|ENSMUSG00000027971.10|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm10_v2_chr4_+_62965560_62965617	2.48298	Onecut1_Cux2	ENSMUST00000030043.6|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000107415.1|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000064814.5|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618
mm10_v2_chr9_-_50739365_50739517	2.07384	Onecut1_Cux2	ENSMUST00000117093.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000121634.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr8_-_58911627_58911627	2.07284	Onecut1_Cux2	ENSMUST00000077447.4|Galntl6|ENSMUSG00000061864.6|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm10_v2_chrX_+_134404780_134404897	1.93336	Onecut1_Cux2	ENSMUST00000113224.2|Drp2|ENSMUSG00000000223.7|dystrophin related protein 2 	ENSMUST00000113226.1|Drp2|ENSMUSG00000000223.7|dystrophin related protein 2
mm10_v2_chrX_+_134404543_134404628	1.81768	Onecut1_Cux2	ENSMUST00000113228.1|Drp2|ENSMUSG00000000223.7|dystrophin related protein 2 	ENSMUST00000153424.1|Drp2|ENSMUSG00000000223.7|dystrophin related protein 2
mm10_v2_chr1_+_165302625_165302625	1.78408	Onecut1_Cux2	ENSMUST00000111450.1|Gpr161|ENSMUSG00000040836.9|G protein-coupled receptor 161
mm10_v2_chr8_+_58911755_58911755	1.78227	Onecut1_Cux2	ENSMUST00000062978.6|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr18_-_72351029_72351073	1.69364	Onecut1_Cux2	ENSMUST00000114943.3|Dcc|ENSMUSG00000060534.9|deleted in colorectal carcinoma
mm10_v2_chr18_-_72351009_72351022	1.66812	Onecut1_Cux2	ENSMUST00000073379.5|Dcc|ENSMUSG00000060534.9|deleted in colorectal carcinoma
mm10_v2_chr13_+_93304940_93305278	1.5976	Onecut1_Cux2	ENSMUST00000109497.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109498.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000060490.4|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109492.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109496.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109495.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr13_+_93304799_93304935	1.58856	Onecut1_Cux2	ENSMUST00000080127.5|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr4_-_97584605_97584610	1.47809	Onecut1_Cux2	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr4_-_97584612_97584643	1.46108	Onecut1_Cux2	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr19_-_57197377_57197417	1.45878	Onecut1_Cux2	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr19_-_57197435_57197460	1.39114	Onecut1_Cux2	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr15_+_92161343_92161366	1.3664	Onecut1_Cux2	ENSMUST00000068378.5|Cntn1|ENSMUSG00000055022.8|contactin 1
mm10_v2_chr19_-_37178011_37178048	1.35996	Onecut1_Cux2	ENSMUST00000133988.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr3_+_8509477_8509550	1.35398	Onecut1_Cux2	ENSMUST00000029002.7|Stmn2|ENSMUSG00000027500.9|stathmin-like 2
mm10_v2_chr19_-_57197496_57197536	1.32952	Onecut1_Cux2	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr12_-_46818749_46818788	1.2827	Onecut1_Cux2	ENSMUST00000021438.6|Nova1|ENSMUSG00000021047.6|neuro-oncological ventral antigen 1
mm10_v2_chr8_+_20136455_20136574	1.28158	Onecut1_Cux2	ENSMUST00000179299.1|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811 	ENSMUST00000096485.4|Gm21811|ENSMUSG00000096401.1|predicted gene, 21811
mm10_v2_chr4_+_109343029_109343081	1.23822	Onecut1_Cux2	ENSMUST00000030281.5|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr1_+_191717834_191717904	1.23287	Onecut1_Cux2	ENSMUST00000110855.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1 	ENSMUST00000133076.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1
mm10_v2_chr2_-_168767136_168767201	1.23076	Onecut1_Cux2	ENSMUST00000029061.5|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila) 	ENSMUST00000103074.1|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chrX_+_41401128_41401200	1.19127	Onecut1_Cux2	ENSMUST00000115103.2|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr19_-_57197556_57197631	1.1354	Onecut1_Cux2	ENSMUST00000099294.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr1_-_54194048_54194048	1.13267	Onecut1_Cux2	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr11_+_29373618_29373777	1.12959	Onecut1_Cux2	ENSMUST00000040182.6|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A 	ENSMUST00000109477.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr14_-_55092277_55092324	1.07708	Onecut1_Cux2	ENSMUST00000036328.8|Zfhx2|ENSMUSG00000040721.8|zinc finger homeobox 2
mm10_v2_chr11_+_120232921_120232952	1.07425	Onecut1_Cux2	ENSMUST00000122148.1|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1 	ENSMUST00000044985.7|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1
mm10_v2_chr15_-_103215285_103215366	1.0419	Onecut1_Cux2	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr2_-_72986716_72986716	1.01692	Onecut1_Cux2	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr9_-_29963112_29963141	0.956758	Onecut1_Cux2	ENSMUST00000075069.4|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr14_+_69029289_69029414	0.935279	Onecut1_Cux2	ENSMUST00000014957.8|Stc1|ENSMUSG00000014813.8|stanniocalcin 1
mm10_v2_chr3_-_33082004_33082068	0.862209	Onecut1_Cux2	ENSMUST00000108225.3|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr7_-_127449109_127449166	0.838897	Onecut1_Cux2	ENSMUST00000053392.4|Zfp689|ENSMUSG00000048921.5|zinc finger protein 689
mm10_v2_chr1_-_89933290_89933290	0.768967	Onecut1_Cux2	ENSMUST00000036954.7|Gbx2|ENSMUSG00000034486.7|gastrulation brain homeobox 2
mm10_v2_chr2_+_90745370_90745469	0.756489	Onecut1_Cux2	ENSMUST00000013759.5|Fnbp4|ENSMUSG00000008200.8|formin binding protein 4
mm10_v2_chr7_-_127448993_127449077	0.738734	Onecut1_Cux2	ENSMUST00000106299.1|Zfp689|ENSMUSG00000048921.5|zinc finger protein 689
mm10_v2_chr7_+_75848338_75848401	0.697916	Onecut1_Cux2	ENSMUST00000092073.5|Klhl25|ENSMUSG00000055652.8|kelch-like 25 	ENSMUST00000171155.2|Klhl25|ENSMUSG00000055652.8|kelch-like 25
mm10_v2_chr9_+_59589288_59589353	0.678439	Onecut1_Cux2	ENSMUST00000121266.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000118164.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr8_-_79399513_79399532	0.657841	Onecut1_Cux2	ENSMUST00000066091.7|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000109885.1|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000066081.3|Smad1|ENSMUSG00000031681.8|SMAD family member 1
mm10_v2_chr2_-_25224653_25224702	0.632185	Onecut1_Cux2	ENSMUST00000043584.4|Tubb4b|ENSMUSG00000036752.4|tubulin, beta 4B class IVB
mm10_v2_chr8_-_8660773_8660773	0.614531	Onecut1_Cux2	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr3_+_94372794_94372872	0.59091	Onecut1_Cux2	ENSMUST00000029795.3|Rorc|ENSMUSG00000028150.8|RAR-related orphan receptor gamma
mm10_v2_chr2_-_168767029_168767104	0.582499	Onecut1_Cux2	ENSMUST00000075044.3|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr6_-_23132981_23132992	0.536626	Onecut1_Cux2	ENSMUST00000031707.7|Aass|ENSMUSG00000029695.7|aminoadipate-semialdehyde synthase
mm10_v2_chr2_-_7081256_7081318	0.528324	Onecut1_Cux2	ENSMUST00000183209.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chrM_-_14060_14074	0.520752	Onecut1_Cux2	ENSMUST00000082419.1|mt-Nd6|ENSMUSG00000064368.1|mitochondrially encoded NADH dehydrogenase 6
mm10_v2_chr10_-_112928974_112929026	0.513081	Onecut1_Cux2	ENSMUST00000099276.2|Atxn7l3b|ENSMUSG00000074748.2|ataxin 7-like 3B
mm10_v2_chr9_+_54980880_54980880	0.484613	Onecut1_Cux2	ENSMUST00000093844.3|Chrna5|ENSMUSG00000035594.9|cholinergic receptor, nicotinic, alpha polypeptide 5
mm10_v2_chr18_+_12972225_12972314	0.480772	Onecut1_Cux2	ENSMUST00000025290.5|Impact|ENSMUSG00000024423.5|imprinted and ancient
mm10_v2_chr7_+_35802593_35802593	0.435378	Onecut1_Cux2	ENSMUST00000052454.2|E130304I02Rik|ENSMUSG00000044997.2|RIKEN cDNA E130304I02 gene
mm10_v2_chrM_+_14138_14154	0.403309	Onecut1_Cux2	ENSMUST00000082421.1|mt-Cytb|ENSMUSG00000064370.1|mitochondrially encoded cytochrome b
mm10_v2_chrX_-_51205990_51206033	0.39838	Onecut1_Cux2	ENSMUST00000114876.2|Mbnl3|ENSMUSG00000036109.11|muscleblind-like 3 (Drosophila)
mm10_v2_chrX_+_56609751_56609797	0.393794	Onecut1_Cux2	ENSMUST00000144068.1|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm10_v2_chr3_-_79842662_79842662	0.392611	Onecut1_Cux2	ENSMUST00000029568.1|Tmem144|ENSMUSG00000027956.5|transmembrane protein 144
mm10_v2_chr2_-_7081207_7081248	0.363383	Onecut1_Cux2	ENSMUST00000114923.2|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182706.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr2_+_130277157_130277315	0.362327	Onecut1_Cux2	ENSMUST00000028890.8|Nop56|ENSMUSG00000027405.10|NOP56 ribonucleoprotein 	ENSMUST00000159373.1|Nop56|ENSMUSG00000027405.10|NOP56 ribonucleoprotein
mm10_v2_chr5_+_63649335_63649451	0.358815	Onecut1_Cux2	ENSMUST00000159584.1|3110047P20Rik|ENSMUSG00000090061.3|RIKEN cDNA 3110047P20 gene
mm10_v2_chr2_+_163602294_163602322	0.326056	Onecut1_Cux2	ENSMUST00000171696.1|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like 	ENSMUST00000109408.3|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like
mm10_v2_chr1_-_54438940_54438994	0.316648	Onecut1_Cux2	ENSMUST00000041638.6|Gtf3c3|ENSMUSG00000041303.6|general transcription factor IIIC, polypeptide 3
mm10_v2_chr18_+_35965036_35965087	0.294592	Onecut1_Cux2	ENSMUST00000176873.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2 	ENSMUST00000177432.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr5_-_3596540_3596585	0.28195	Onecut1_Cux2	ENSMUST00000042753.7|Rbm48|ENSMUSG00000040302.11|RNA binding motif protein 48
mm10_v2_chr3_-_129755305_129755326	0.255088	Onecut1_Cux2	ENSMUST00000029653.2|Egf|ENSMUSG00000028017.3|epidermal growth factor
mm10_v2_chr11_-_120624973_120625014	0.244287	Onecut1_Cux2	ENSMUST00000106183.2|Sirt7|ENSMUSG00000025138.8|sirtuin 7 	ENSMUST00000080202.5|Sirt7|ENSMUSG00000025138.8|sirtuin 7
mm10_v2_chr13_-_54688246_54688263	0.244052	Onecut1_Cux2	ENSMUST00000122935.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44 	ENSMUST00000128257.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr16_+_32431225_32431280	0.236524	Onecut1_Cux2	ENSMUST00000115140.1|Pcyt1a|ENSMUSG00000005615.8|phosphate cytidylyltransferase 1, choline, alpha isoform
mm10_v2_chr4_-_110292719_110292732	0.236502	Onecut1_Cux2	ENSMUST00000106601.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chrX_+_56454871_56454887	0.216674	Onecut1_Cux2	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr18_+_35965088_35965110	0.210946	Onecut1_Cux2	ENSMUST00000175734.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr2_+_163602331_163602359	0.206209	Onecut1_Cux2	ENSMUST00000152135.1|Ttpal|ENSMUSG00000017679.10|tocopherol (alpha) transfer protein-like
mm10_v2_chr11_+_97315716_97315908	0.16845	Onecut1_Cux2	ENSMUST00000019026.3|Mrpl45|ENSMUSG00000018882.6|mitochondrial ribosomal protein L45 	ENSMUST00000132168.1|Mrpl45|ENSMUSG00000018882.6|mitochondrial ribosomal protein L45
mm10_v2_chr16_+_32430895_32430978	0.145169	Onecut1_Cux2	ENSMUST00000115137.1|Pcyt1a|ENSMUSG00000005615.8|phosphate cytidylyltransferase 1, choline, alpha isoform 	ENSMUST00000079791.4|Pcyt1a|ENSMUSG00000005615.8|phosphate cytidylyltransferase 1, choline, alpha isoform
mm10_v2_chr2_-_32451396_32451470	0.136933	Onecut1_Cux2	ENSMUST00000028160.8|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 	ENSMUST00000113310.2|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm10_v2_chr7_+_25152456_25152462	0.129718	Onecut1_Cux2	ENSMUST00000098678.1|D930028M14Rik|ENSMUSG00000074274.1|RIKEN cDNA D930028M14 gene
mm10_v2_chr11_+_4902212_4902247	0.12209	Onecut1_Cux2	ENSMUST00000142543.1|Thoc5|ENSMUSG00000034274.5|THO complex 5
mm10_v2_chr7_+_45627482_45627493	0.118298	Onecut1_Cux2	ENSMUST00000057927.7|Rasip1|ENSMUSG00000044562.10|Ras interacting protein 1
mm10_v2_chr5_+_92683625_92683648	0.085481	Onecut1_Cux2	ENSMUST00000168878.1|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr18_-_84589491_84589527	0.0803095	Onecut1_Cux2	ENSMUST00000125763.1|Zfp407|ENSMUSG00000048410.10|zinc finger protein 407
mm10_v2_chrX_+_101377267_101377281	0.0588385	Onecut1_Cux2	ENSMUST00000052130.7|Gjb1|ENSMUSG00000047797.8|gap junction protein, beta 1
mm10_v2_chr5_-_5694559_5694581	0.0568907	Onecut1_Cux2	ENSMUST00000115426.2|Steap2|ENSMUSG00000015653.7|six transmembrane epithelial antigen of prostate 2
mm10_v2_chr8_-_91801547_91801560	0.0381511	Onecut1_Cux2	ENSMUST00000093312.4|Irx3|ENSMUSG00000031734.11|Iroquois related homeobox 3 (Drosophila)
mm10_v2_chr6_-_143100028_143100109	0.0250634	Onecut1_Cux2	ENSMUST00000111758.2|C2cd5|ENSMUSG00000030279.9|C2 calcium-dependent domain containing 5 	ENSMUST00000171349.1|C2cd5|ENSMUSG00000030279.9|C2 calcium-dependent domain containing 5 	ENSMUST00000087485.4|C2cd5|ENSMUSG00000030279.9|C2 calcium-dependent domain containing 5
mm10_v2_chr6_-_56704673_56704712	0.00486029	Onecut1_Cux2	ENSMUST00000170382.2|Lsm5|ENSMUSG00000091625.2|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
