mm10_v2_chr18_+_60803838_60803856	9.93079	Rfx5	ENSMUST00000050487.8|Cd74|ENSMUSG00000024610.8|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) 	ENSMUST00000097563.2|Cd74|ENSMUSG00000024610.8|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) 	ENSMUST00000167610.1|Cd74|ENSMUSG00000024610.8|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
mm10_v2_chr17_+_34263209_34263256	7.40609	Rfx5	ENSMUST00000040828.5|H2-Ab1|ENSMUSG00000073421.5|histocompatibility 2, class II antigen A, beta 1
mm10_v2_chr17_+_34305883_34305909	5.71279	Rfx5	ENSMUST00000074557.8|H2-Eb1|ENSMUSG00000060586.9|histocompatibility 2, class II antigen E beta
mm10_v2_chr19_+_37376359_37376422	4.9032	Rfx5	ENSMUST00000012587.3|Kif11|ENSMUSG00000012443.3|kinesin family member 11
mm10_v2_chr7_-_45092130_45092185	4.68651	Rfx5	ENSMUST00000148175.1|Rcn3|ENSMUSG00000019539.4|reticulocalbin 3, EF-hand calcium binding domain
mm10_v2_chr7_-_45091713_45091734	4.25752	Rfx5	ENSMUST00000141576.1|Rcn3|ENSMUSG00000019539.4|reticulocalbin 3, EF-hand calcium binding domain
mm10_v2_chr2_+_122147680_122147696	4.08323	Rfx5	ENSMUST00000102476.4|B2m|ENSMUSG00000060802.8|beta-2 microglobulin
mm10_v2_chr17_+_34197715_34197790	3.9596	Rfx5	ENSMUST00000173441.1|Psmb8|ENSMUSG00000024338.8|proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) 	ENSMUST00000025196.8|Psmb8|ENSMUSG00000024338.8|proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)
mm10_v2_chr4_-_126325641_126325653	3.49287	Rfx5	ENSMUST00000131113.1|Tekt2|ENSMUSG00000028845.9|tektin 2
mm10_v2_chr17_-_34187219_34187345	3.47285	Rfx5	ENSMUST00000173831.1|Psmb9|ENSMUSG00000096727.1|proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)
mm10_v2_chr14_+_55618023_55618037	3.33689	Rfx5	ENSMUST00000002395.7|Rec8|ENSMUSG00000002324.7|REC8 homolog (yeast)
mm10_v2_chr5_-_36830647_36830657	3.25905	Rfx5	ENSMUST00000031002.3|Man2b2|ENSMUSG00000029119.3|mannosidase 2, alpha B2
mm10_v2_chr7_-_105752193_105752234	3.16514	Rfx5	ENSMUST00000033184.4|Tpp1|ENSMUSG00000030894.4|tripeptidyl peptidase I
mm10_v2_chr5_+_139150211_139150249	3.14234	Rfx5	ENSMUST00000026975.6|Heatr2|ENSMUSG00000025857.6|HEAT repeat containing 2
mm10_v2_chr11_-_3539228_3539292	3.10264	Rfx5	ENSMUST00000075118.3|Smtn|ENSMUSG00000020439.11|smoothelin 	ENSMUST00000136243.1|Smtn|ENSMUSG00000020439.11|smoothelin 	ENSMUST00000170588.1|Smtn|ENSMUSG00000020439.11|smoothelin 	ENSMUST00000020721.8|Smtn|ENSMUSG00000020439.11|smoothelin
mm10_v2_chr11_+_117523526_117523603	3.09684	Rfx5	ENSMUST00000132261.1|Gm11734|ENSMUSG00000085419.1|predicted gene 11734
mm10_v2_chr17_+_35379608_35379637	2.88715	Rfx5	ENSMUST00000081435.4|H2-Q4|ENSMUSG00000035929.11|histocompatibility 2, Q region locus 4
mm10_v2_chr17_+_35439155_35439195	2.74557	Rfx5	ENSMUST00000071951.6|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7 	ENSMUST00000078205.7|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7 	ENSMUST00000116598.3|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7 	ENSMUST00000076256.7|H2-Q7|ENSMUSG00000060550.9|histocompatibility 2, Q region locus 7
mm10_v2_chr8_+_94214567_94214608	2.73054	Rfx5	ENSMUST00000079961.6|Nup93|ENSMUSG00000032939.7|nucleoporin 93
mm10_v2_chr10_-_19011948_19011973	2.65669	Rfx5	ENSMUST00000105527.1|Tnfaip3|ENSMUSG00000019850.5|tumor necrosis factor, alpha-induced protein 3
mm10_v2_chr11_+_61505138_61505210	2.47607	Rfx5	ENSMUST00000102657.3|B9d1|ENSMUSG00000001039.6|B9 protein domain 1
mm10_v2_chr1_+_194619815_194619833	2.25321	Rfx5	ENSMUST00000027952.5|Plxna2|ENSMUSG00000026640.6|plexin A2
mm10_v2_chr8_-_89187560_89187560	2.09875	Rfx5	ENSMUST00000093326.2|Gm5356|ENSMUSG00000069962.2|predicted pseudogene 5356
mm10_v2_chr7_-_30664986_30664999	2.08336	Rfx5	ENSMUST00000019697.8|Haus5|ENSMUSG00000078762.4|HAUS augmin-like complex, subunit 5
mm10_v2_chr17_+_35861318_35861339	1.83061	Rfx5	ENSMUST00000074259.8|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein) 	ENSMUST00000174873.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr19_-_4615647_4615700	1.61308	Rfx5	ENSMUST00000113822.2|Lrfn4|ENSMUSG00000045045.7|leucine rich repeat and fibronectin type III domain containing 4
mm10_v2_chr7_+_28180226_28180266	1.58581	Rfx5	ENSMUST00000172467.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr17_+_34187789_34187828	1.57865	Rfx5	ENSMUST00000041633.8|Tap1|ENSMUSG00000037321.11|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
mm10_v2_chr18_-_51865881_51865881	1.40489	Rfx5	ENSMUST00000091905.2|Gm4950|ENSMUSG00000069379.2|predicted pseudogene 4950
mm10_v2_chr8_+_84969587_84969636	1.36281	Rfx5	ENSMUST00000109734.1|Prdx2|ENSMUSG00000005161.9|peroxiredoxin 2 	ENSMUST00000005292.8|Prdx2|ENSMUSG00000005161.9|peroxiredoxin 2
mm10_v2_chr6_-_8259098_8259173	1.32439	Rfx5	ENSMUST00000012627.4|Rpa3|ENSMUSG00000012483.4|replication protein A3
mm10_v2_chr17_+_34187545_34187571	1.32209	Rfx5	ENSMUST00000170086.1|Tap1|ENSMUSG00000037321.11|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
mm10_v2_chr7_+_28180272_28180316	1.28043	Rfx5	ENSMUST00000173223.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr7_+_100537052_100537139	1.25154	Rfx5	ENSMUST00000054310.3|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr1_-_183147461_183147461	1.20896	Rfx5	ENSMUST00000171366.1|Disp1|ENSMUSG00000030768.6|dispatched homolog 1 (Drosophila)
mm10_v2_chr17_+_37270214_37270249	1.17553	Rfx5	ENSMUST00000038580.6|H2-M3|ENSMUSG00000016206.6|histocompatibility 2, M region locus 3
mm10_v2_chr7_+_28179469_28179535	1.08895	Rfx5	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr7_+_100537192_100537232	1.06458	Rfx5	ENSMUST00000120454.1|Coa4|ENSMUSG00000044881.6|cytochrome c oxidase assembly factor 4
mm10_v2_chr17_+_35861343_35861486	1.05774	Rfx5	ENSMUST00000172931.1|Nrm|ENSMUSG00000059791.8|nurim (nuclear envelope membrane protein)
mm10_v2_chr1_-_155146755_155146789	1.02758	Rfx5	ENSMUST00000027744.8|Mr1|ENSMUSG00000026471.8|major histocompatibility complex, class I-related
mm10_v2_chr7_+_44467980_44468014	1.01753	Rfx5	ENSMUST00000035844.4|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2
mm10_v2_chr7_+_44468020_44468045	1.0042	Rfx5	ENSMUST00000117324.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2 	ENSMUST00000120852.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2 	ENSMUST00000118628.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2
mm10_v2_chr1_-_156204998_156205032	0.975727	Rfx5	ENSMUST00000015628.3|Fam163a|ENSMUSG00000015484.3|family with sequence similarity 163, member A
mm10_v2_chr19_-_10482874_10482938	0.951704	Rfx5	ENSMUST00000038842.3|Ppp1r32|ENSMUSG00000035179.3|protein phosphatase 1, regulatory subunit 32
mm10_v2_chr10_-_7663245_7663309	0.928948	Rfx5	ENSMUST00000163085.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 	ENSMUST00000159917.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm10_v2_chr9_-_21291124_21291209	0.877926	Rfx5	ENSMUST00000086374.6|Cdkn2d|ENSMUSG00000096472.1|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
mm10_v2_chr8_-_69996326_69996379	0.871	Rfx5	ENSMUST00000177851.1|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A 	ENSMUST00000065169.4|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A
mm10_v2_chr3_-_95882193_95882231	0.774951	Rfx5	ENSMUST00000159863.1|Gm129|ENSMUSG00000038550.4|predicted gene 129 	ENSMUST00000159739.1|Gm129|ENSMUSG00000038550.4|predicted gene 129 	ENSMUST00000036418.3|Gm129|ENSMUSG00000038550.4|predicted gene 129
mm10_v2_chr7_+_44468051_44468072	0.774535	Rfx5	ENSMUST00000118493.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2
mm10_v2_chr2_+_163438455_163438536	0.75824	Rfx5	ENSMUST00000109420.3|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000109421.3|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000018087.6|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1 	ENSMUST00000137070.1|Gdap1l1|ENSMUSG00000017943.9|ganglioside-induced differentiation-associated protein 1-like 1
mm10_v2_chr9_+_44772951_44772964	0.553534	Rfx5	ENSMUST00000128150.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr4_+_107968332_107968424	0.516665	Rfx5	ENSMUST00000106713.3|Slc1a7|ENSMUSG00000008932.9|solute carrier family 1 (glutamate transporter), member 7
mm10_v2_chr16_+_20696175_20696211	0.513083	Rfx5	ENSMUST00000128273.1|Fam131a|ENSMUSG00000050821.7|family with sequence similarity 131, member A
mm10_v2_chr3_-_95882232_95882251	0.501516	Rfx5	ENSMUST00000161866.1|Gm129|ENSMUSG00000038550.4|predicted gene 129
mm10_v2_chr7_-_101921175_101921183	0.486106	Rfx5	ENSMUST00000098236.2|Lrrc51|ENSMUSG00000064307.6|leucine rich repeat containing 51
mm10_v2_chr10_-_7663569_7663613	0.464312	Rfx5	ENSMUST00000162606.1|Pcmt1|ENSMUSG00000019795.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm10_v2_chr7_-_101921186_101921230	0.458396	Rfx5	ENSMUST00000106965.1|Lrrc51|ENSMUSG00000064307.6|leucine rich repeat containing 51 	ENSMUST00000106968.1|Lrrc51|ENSMUSG00000064307.6|leucine rich repeat containing 51 	ENSMUST00000106967.1|Lrrc51|ENSMUSG00000064307.6|leucine rich repeat containing 51
mm10_v2_chr11_+_98682554_98682573	0.396984	Rfx5	ENSMUST00000017365.8|Psmd3|ENSMUSG00000017221.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm10_v2_chr17_-_24886304_24886353	0.378142	Rfx5	ENSMUST00000044252.5|Nubp2|ENSMUSG00000039183.5|nucleotide binding protein 2
mm10_v2_chr9_+_44773191_44773263	0.353375	Rfx5	ENSMUST00000147559.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr17_+_34398802_34398841	0.307182	Rfx5	ENSMUST00000114175.1|BC051142|ENSMUSG00000057246.8|cDNA sequence BC051142 	ENSMUST00000078615.5|BC051142|ENSMUSG00000057246.8|cDNA sequence BC051142 	ENSMUST00000139063.1|BC051142|ENSMUSG00000057246.8|cDNA sequence BC051142 	ENSMUST00000097348.2|BC051142|ENSMUSG00000057246.8|cDNA sequence BC051142
mm10_v2_chr3_-_95882031_95882074	0.273314	Rfx5	ENSMUST00000161994.1|Gm129|ENSMUSG00000038550.4|predicted gene 129
mm10_v2_chr13_+_24831661_24831687	0.263321	Rfx5	ENSMUST00000038039.2|Tdp2|ENSMUSG00000035958.2|tyrosyl-DNA phosphodiesterase 2
mm10_v2_chr15_+_36179530_36179701	0.248471	Rfx5	ENSMUST00000171205.1|Spag1|ENSMUSG00000037617.5|sperm associated antigen 1
mm10_v2_chr1_+_134405984_134406005	0.236156	Rfx5	ENSMUST00000173908.1|Cyb5r1|ENSMUSG00000026456.12|cytochrome b5 reductase 1
mm10_v2_chr11_+_72441341_72441386	0.230771	Rfx5	ENSMUST00000045633.5|Mybbp1a|ENSMUSG00000040463.10|MYB binding protein (P160) 1a
mm10_v2_chr3_+_16183177_16183206	0.221753	Rfx5	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr15_+_36179299_36179368	0.190056	Rfx5	ENSMUST00000047348.3|Spag1|ENSMUSG00000037617.5|sperm associated antigen 1
mm10_v2_chr9_+_44772909_44772949	0.17526	Rfx5	ENSMUST00000002099.3|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr1_+_136676413_136676473	0.130824	Rfx5	ENSMUST00000181491.1|Gm19705|ENSMUSG00000097113.1|predicted gene, 19705
mm10_v2_chr9_+_44773027_44773100	0.105115	Rfx5	ENSMUST00000125877.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr9_-_51102062_51102085	0.0571715	Rfx5	ENSMUST00000170947.1|4833427G06Rik|ENSMUSG00000032057.8|RIKEN cDNA 4833427G06 gene
mm10_v2_chr8_+_27042555_27042589	0.027404	Rfx5	ENSMUST00000033875.8|Prosc|ENSMUSG00000031485.8|proline synthetase co-transcribed 	ENSMUST00000098851.4|Prosc|ENSMUSG00000031485.8|proline synthetase co-transcribed
mm10_v2_chr2_-_128687354_128687396	0.00921378	Rfx5	ENSMUST00000110332.1|Anapc1|ENSMUSG00000014355.4|anaphase promoting complex subunit 1 	ENSMUST00000110333.1|Anapc1|ENSMUSG00000014355.4|anaphase promoting complex subunit 1 	ENSMUST00000014499.3|Anapc1|ENSMUSG00000014355.4|anaphase promoting complex subunit 1
