mm10_v2_chr1_+_185454803_185454848	9.32755	Scrt1	ENSMUST00000061093.6|Slc30a10|ENSMUSG00000026614.6|solute carrier family 30, member 10
mm10_v2_chr14_+_28511344_28511405	8.45886	Scrt1	ENSMUST00000112272.1|Wnt5a|ENSMUSG00000021994.8|wingless-related MMTV integration site 5A
mm10_v2_chr5_-_114273702_114273807	7.98415	Scrt1	ENSMUST00000144050.1|Foxn4|ENSMUSG00000042002.5|forkhead box N4 	ENSMUST00000044790.5|Foxn4|ENSMUSG00000042002.5|forkhead box N4
mm10_v2_chr9_-_27155418_27155425	7.53627	Scrt1	ENSMUST00000167074.1|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3 	ENSMUST00000034472.8|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3
mm10_v2_chr5_+_33658567_33658616	7.35055	Scrt1	ENSMUST00000114426.3|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3
mm10_v2_chr6_+_128375456_128375456	7.00772	Scrt1	ENSMUST00000100926.2|4933413G19Rik|ENSMUSG00000079304.3|RIKEN cDNA 4933413G19 gene
mm10_v2_chr9_+_91368811_91368828	6.90344	Scrt1	ENSMUST00000173054.1|Zic4|ENSMUSG00000036972.8|zinc finger protein of the cerebellum 4
mm10_v2_chr9_+_91368970_91369073	6.90162	Scrt1	ENSMUST00000172646.1|Zic4|ENSMUSG00000036972.8|zinc finger protein of the cerebellum 4
mm10_v2_chr11_-_100355383_100355416	6.62722	Scrt1	ENSMUST00000146878.2|Hap1|ENSMUSG00000006930.9|huntingtin-associated protein 1
mm10_v2_chr11_-_101466222_101466237	6.21866	Scrt1	ENSMUST00000040430.7|Vat1|ENSMUSG00000034993.7|vesicle amine transport protein 1 homolog (T californica)
mm10_v2_chr6_+_138140521_138140599	6.15775	Scrt1	ENSMUST00000120939.1|Mgst1|ENSMUSG00000008540.5|microsomal glutathione S-transferase 1 	ENSMUST00000120302.1|Mgst1|ENSMUSG00000008540.5|microsomal glutathione S-transferase 1
mm10_v2_chr9_-_96862903_96862985	5.79716	Scrt1	ENSMUST00000121077.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000124923.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2
mm10_v2_chr5_+_33658550_33658563	5.7739	Scrt1	ENSMUST00000152847.1|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3
mm10_v2_chr5_+_33658123_33658160	5.72006	Scrt1	ENSMUST00000074849.6|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3 	ENSMUST00000079534.4|Tacc3|ENSMUSG00000037313.10|transforming, acidic coiled-coil containing protein 3
mm10_v2_chr10_+_26229707_26229763	5.48581	Scrt1	ENSMUST00000060716.5|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3 	ENSMUST00000164660.1|Samd3|ENSMUSG00000051354.7|sterile alpha motif domain containing 3
mm10_v2_chr8_+_31187317_31187357	5.23846	Scrt1	ENSMUST00000066173.5|Fut10|ENSMUSG00000046152.10|fucosyltransferase 10 	ENSMUST00000161788.1|Fut10|ENSMUSG00000046152.10|fucosyltransferase 10 	ENSMUST00000110527.2|Fut10|ENSMUSG00000046152.10|fucosyltransferase 10 	ENSMUST00000161502.1|Fut10|ENSMUSG00000046152.10|fucosyltransferase 10
mm10_v2_chr3_+_34649987_34650005	5.22881	Scrt1	ENSMUST00000099151.2|Sox2|ENSMUSG00000074637.4|SRY-box containing gene 2
mm10_v2_chr14_+_32028989_32029044	5.15674	Scrt1	ENSMUST00000022460.4|Galnt15|ENSMUSG00000021903.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15
mm10_v2_chr18_-_82406777_82406777	5.15551	Scrt1	ENSMUST00000065224.6|Galr1|ENSMUSG00000024553.7|galanin receptor 1
mm10_v2_chr6_-_88898664_88898780	5.12547	Scrt1	ENSMUST00000058011.6|Mcm2|ENSMUSG00000002870.7|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)
mm10_v2_chr4_-_19570073_19570117	5.05964	Scrt1	ENSMUST00000029885.4|Cpne3|ENSMUSG00000028228.5|copine III
mm10_v2_chr8_+_127064107_127064347	4.87002	Scrt1	ENSMUST00000162536.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000026921.6|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162665.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160766.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162602.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162531.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000160581.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000161355.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000159537.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr13_-_23991158_23991214	4.63393	Scrt1	ENSMUST00000021770.7|Scgn|ENSMUSG00000021337.7|secretagogin, EF-hand calcium binding protein
mm10_v2_chr4_-_116123618_116123695	4.50048	Scrt1	ENSMUST00000102704.3|Rad54l|ENSMUSG00000028702.9|RAD54 like (S. cerevisiae) 	ENSMUST00000102705.3|Rad54l|ENSMUSG00000028702.9|RAD54 like (S. cerevisiae)
mm10_v2_chr2_+_92915080_92915115	4.42946	Scrt1	ENSMUST00000028648.2|Syt13|ENSMUSG00000027220.2|synaptotagmin XIII
mm10_v2_chr7_-_44815658_44815682	4.32343	Scrt1	ENSMUST00000107893.1|Atf5|ENSMUSG00000038539.8|activating transcription factor 5
mm10_v2_chr7_-_30973367_30973389	4.02665	Scrt1	ENSMUST00000108116.3|Lsr|ENSMUSG00000001247.10|lipolysis stimulated lipoprotein receptor
mm10_v2_chr1_-_87156127_87156165	4.01516	Scrt1	ENSMUST00000160810.1|Ecel1|ENSMUSG00000026247.7|endothelin converting enzyme-like 1
mm10_v2_chr7_+_110221697_110221708	4.00255	Scrt1	ENSMUST00000033325.7|Swap70|ENSMUSG00000031015.7|SWA-70 protein
mm10_v2_chr11_-_6444352_6444443	3.97372	Scrt1	ENSMUST00000093346.5|H2afv|ENSMUSG00000041126.10|H2A histone family, member V 	ENSMUST00000109737.2|H2afv|ENSMUSG00000041126.10|H2A histone family, member V
mm10_v2_chr17_+_26917091_26917107	3.948	Scrt1	ENSMUST00000078961.4|Kifc5b|ENSMUSG00000024301.9|kinesin family member C5B
mm10_v2_chr2_+_72285637_72285749	3.88386	Scrt1	ENSMUST00000090824.5|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK 	ENSMUST00000135469.1|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK
mm10_v2_chr14_+_60634719_60634776	3.87179	Scrt1	ENSMUST00000022566.7|Spata13|ENSMUSG00000021990.9|spermatogenesis associated 13 	ENSMUST00000159729.1|Spata13|ENSMUSG00000021990.9|spermatogenesis associated 13
mm10_v2_chr3_+_90537242_90537270	3.79063	Scrt1	ENSMUST00000098911.3|S100a16|ENSMUSG00000074457.4|S100 calcium binding protein A16
mm10_v2_chr3_+_90537306_90537326	3.74502	Scrt1	ENSMUST00000107335.1|S100a16|ENSMUSG00000074457.4|S100 calcium binding protein A16
mm10_v2_chr5_-_137116177_137116219	3.67079	Scrt1	ENSMUST00000054384.5|Trim56|ENSMUSG00000043279.9|tripartite motif-containing 56 	ENSMUST00000152207.1|Trim56|ENSMUSG00000043279.9|tripartite motif-containing 56
mm10_v2_chr7_-_144939823_144939869	3.64878	Scrt1	ENSMUST00000093962.4|Ccnd1|ENSMUSG00000070348.4|cyclin D1
mm10_v2_chr3_-_57301919_57301956	3.62375	Scrt1	ENSMUST00000029376.8|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr2_+_131234043_131234136	3.60731	Scrt1	ENSMUST00000041362.5|Mavs|ENSMUSG00000037523.7|mitochondrial antiviral signaling protein 	ENSMUST00000110199.2|Mavs|ENSMUSG00000037523.7|mitochondrial antiviral signaling protein
mm10_v2_chr13_-_81633119_81633154	3.57197	Scrt1	ENSMUST00000126444.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000128585.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000146749.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000095585.4|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98
mm10_v2_chr1_+_172481788_172481819	3.46796	Scrt1	ENSMUST00000127052.1|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9
mm10_v2_chr7_-_30973399_30973435	3.42478	Scrt1	ENSMUST00000098553.4|Lsr|ENSMUSG00000001247.10|lipolysis stimulated lipoprotein receptor 	ENSMUST00000147431.1|Lsr|ENSMUSG00000001247.10|lipolysis stimulated lipoprotein receptor
mm10_v2_chr2_-_168590315_168590372	3.41265	Scrt1	ENSMUST00000109184.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm10_v2_chr3_+_121426495_121426541	3.40545	Scrt1	ENSMUST00000029773.8|Cnn3|ENSMUSG00000053931.7|calponin 3, acidic
mm10_v2_chr1_+_172482199_172482314	3.20925	Scrt1	ENSMUST00000135267.1|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000052629.6|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000111235.2|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9
mm10_v2_chr2_-_168590191_168590302	3.19475	Scrt1	ENSMUST00000029057.6|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 	ENSMUST00000074618.3|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm10_v2_chr18_-_14682756_14682914	3.19096	Scrt1	ENSMUST00000040964.6|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18 	ENSMUST00000092041.3|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18 	ENSMUST00000040924.7|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18
mm10_v2_chr7_-_30973464_30973480	2.92108	Scrt1	ENSMUST00000001279.8|Lsr|ENSMUSG00000001247.10|lipolysis stimulated lipoprotein receptor
mm10_v2_chr7_-_133776772_133776811	2.87526	Scrt1	ENSMUST00000033290.5|Dhx32|ENSMUSG00000030986.6|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm10_v2_chr5_+_137630116_137630130	2.848	Scrt1	ENSMUST00000175968.1|Lrch4|ENSMUSG00000093445.1|leucine-rich repeats and calponin homology (CH) domain containing 4
mm10_v2_chr1_-_173942445_173942492	2.8447	Scrt1	ENSMUST00000042228.8|Ifi203|ENSMUSG00000039997.10|interferon activated gene 203 	ENSMUST00000081216.5|Ifi203|ENSMUSG00000039997.10|interferon activated gene 203 	ENSMUST00000111210.2|Mndal|ENSMUSG00000090272.1|myeloid nuclear differentiation antigen like 	ENSMUST00000129829.1|Ifi203|ENSMUSG00000039997.10|interferon activated gene 203 	ENSMUST00000123708.1|Ifi203|ENSMUSG00000039997.10|interferon activated gene 203
mm10_v2_chr14_+_26579535_26579612	2.81965	Scrt1	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chr11_+_115163333_115163348	2.77667	Scrt1	ENSMUST00000021077.3|Slc9a3r1|ENSMUSG00000020733.3|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1
mm10_v2_chr17_+_44188564_44188594	2.77305	Scrt1	ENSMUST00000024755.5|Clic5|ENSMUSG00000023959.8|chloride intracellular channel 5
mm10_v2_chr7_-_44669308_44669348	2.76843	Scrt1	ENSMUST00000148487.1|Myh14|ENSMUSG00000030739.11|myosin, heavy polypeptide 14
mm10_v2_chr9_-_108578657_108578675	2.72735	Scrt1	ENSMUST00000068700.5|Wdr6|ENSMUSG00000066357.5|WD repeat domain 6
mm10_v2_chrX_-_133981765_133981812	2.69497	Scrt1	ENSMUST00000113297.2|Sytl4|ENSMUSG00000031255.8|synaptotagmin-like 4 	ENSMUST00000174542.1|Sytl4|ENSMUSG00000031255.8|synaptotagmin-like 4 	ENSMUST00000033608.8|Sytl4|ENSMUSG00000031255.8|synaptotagmin-like 4 	ENSMUST00000113294.1|Sytl4|ENSMUSG00000031255.8|synaptotagmin-like 4
mm10_v2_chr6_-_120357422_120357435	2.60291	Scrt1	ENSMUST00000032283.5|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr15_-_66500857_66500910	2.59446	Scrt1	ENSMUST00000023006.6|Lrrc6|ENSMUSG00000022375.6|leucine rich repeat containing 6 (testis)
mm10_v2_chr2_-_38287347_38287394	2.5791	Scrt1	ENSMUST00000102787.3|Dennd1a|ENSMUSG00000035392.11|DENN/MADD domain containing 1A
mm10_v2_chr19_-_24861828_24861855	2.53018	Scrt1	ENSMUST00000047666.4|Pgm5|ENSMUSG00000041731.7|phosphoglucomutase 5
mm10_v2_chr6_-_120357342_120357400	2.52199	Scrt1	ENSMUST00000163827.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr6_-_120357440_120357489	2.50404	Scrt1	ENSMUST00000112703.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr14_-_72709534_72709549	2.46962	Scrt1	ENSMUST00000162478.1|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr2_-_170142673_170142678	2.44039	Scrt1	ENSMUST00000109155.1|Zfp217|ENSMUSG00000052056.8|zinc finger protein 217
mm10_v2_chr7_-_133776681_133776704	2.38203	Scrt1	ENSMUST00000130182.1|Dhx32|ENSMUSG00000030986.6|DEAH (Asp-Glu-Ala-His) box polypeptide 32 	ENSMUST00000106139.1|Dhx32|ENSMUSG00000030986.6|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm10_v2_chr11_+_53770458_53770509	2.38177	Scrt1	ENSMUST00000138913.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000123376.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000019043.6|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000133291.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1
mm10_v2_chr9_+_59656368_59656368	2.3025	Scrt1	ENSMUST00000034834.9|Pkm|ENSMUSG00000032294.10|pyruvate kinase, muscle 	ENSMUST00000163694.2|Pkm|ENSMUSG00000032294.10|pyruvate kinase, muscle
mm10_v2_chr8_+_71488103_71488103	2.24438	Scrt1	ENSMUST00000007754.6|Gtpbp3|ENSMUSG00000007610.9|GTP binding protein 3 	ENSMUST00000168847.1|Gtpbp3|ENSMUSG00000007610.9|GTP binding protein 3
mm10_v2_chr2_-_38287174_38287195	2.23647	Scrt1	ENSMUST00000130472.1|Dennd1a|ENSMUSG00000035392.11|DENN/MADD domain containing 1A
mm10_v2_chr12_-_85339346_85339391	2.21672	Scrt1	ENSMUST00000040992.7|Nek9|ENSMUSG00000034290.9|NIMA (never in mitosis gene a)-related expressed kinase 9
mm10_v2_chr2_-_127788854_127788900	2.1873	Scrt1	ENSMUST00000028857.7|Nphp1|ENSMUSG00000027378.10|nephronophthisis 1 (juvenile) homolog (human) 	ENSMUST00000110357.1|Nphp1|ENSMUSG00000027378.10|nephronophthisis 1 (juvenile) homolog (human)
mm10_v2_chr13_+_23756937_23756995	2.17883	Scrt1	ENSMUST00000102965.2|Hist1h4b|ENSMUSG00000069266.4|histone cluster 1, H4b
mm10_v2_chr19_-_5912834_5912871	2.17072	Scrt1	ENSMUST00000136983.1|Dpf2|ENSMUSG00000024826.8|D4, zinc and double PHD fingers family 2
mm10_v2_chr17_-_25081138_25081201	2.16346	Scrt1	ENSMUST00000024984.6|Tmem204|ENSMUSG00000024168.7|transmembrane protein 204
mm10_v2_chr17_+_53584124_53584141	2.15107	Scrt1	ENSMUST00000164390.1|Kat2b|ENSMUSG00000000708.8|K(lysine) acetyltransferase 2B
mm10_v2_chr8_-_84893887_84893921	2.14528	Scrt1	ENSMUST00000003907.7|Gcdh|ENSMUSG00000003809.8|glutaryl-Coenzyme A dehydrogenase 	ENSMUST00000182458.1|Gcdh|ENSMUSG00000003809.8|glutaryl-Coenzyme A dehydrogenase 	ENSMUST00000109745.1|Gcdh|ENSMUSG00000003809.8|glutaryl-Coenzyme A dehydrogenase 	ENSMUST00000142748.1|Gcdh|ENSMUSG00000003809.8|glutaryl-Coenzyme A dehydrogenase
mm10_v2_chr3_+_88325023_88325075	2.14219	Scrt1	ENSMUST00000177005.1|0610031J06Rik|ENSMUSG00000001418.7|RIKEN cDNA 0610031J06 gene
mm10_v2_chr5_-_3473178_3473178	2.11525	Scrt1	ENSMUST00000168422.1|Gm17590|ENSMUSG00000091644.1|predicted gene, 17590
mm10_v2_chr11_+_120491840_120491889	2.11375	Scrt1	ENSMUST00000026899.3|Slc25a10|ENSMUSG00000025792.3|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10
mm10_v2_chr17_-_25844417_25844428	2.07538	Scrt1	ENSMUST00000176591.1|Rhot2|ENSMUSG00000025733.11|ras homolog gene family, member T2
mm10_v2_chr15_-_101054399_101054399	1.93837	Scrt1	ENSMUST00000178140.1|Fignl2|ENSMUSG00000095440.1|fidgetin-like 2
mm10_v2_chr18_+_59062282_59062376	1.92699	Scrt1	ENSMUST00000165666.2|A730017C20Rik|ENSMUSG00000050875.5|RIKEN cDNA A730017C20 gene
mm10_v2_chr19_-_5912771_5912822	1.89932	Scrt1	ENSMUST00000118623.1|Dpf2|ENSMUSG00000024826.8|D4, zinc and double PHD fingers family 2
mm10_v2_chr12_+_113098199_113098323	1.87298	Scrt1	ENSMUST00000009099.6|Mta1|ENSMUSG00000021144.8|metastasis associated 1 	ENSMUST00000109723.1|Mta1|ENSMUSG00000021144.8|metastasis associated 1 	ENSMUST00000109726.1|Mta1|ENSMUSG00000021144.8|metastasis associated 1 	ENSMUST00000109727.2|Mta1|ENSMUSG00000021144.8|metastasis associated 1 	ENSMUST00000069690.4|Mta1|ENSMUSG00000021144.8|metastasis associated 1
mm10_v2_chr12_-_91779129_91779144	1.86918	Scrt1	ENSMUST00000170077.1|Ston2|ENSMUSG00000020961.8|stonin 2
mm10_v2_chr18_+_56432116_56432163	1.84636	Scrt1	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr9_+_110880192_110880207	1.84041	Scrt1	ENSMUST00000130386.1|Als2cl|ENSMUSG00000044037.9|ALS2 C-terminal like
mm10_v2_chr18_+_59062462_59062538	1.82664	Scrt1	ENSMUST00000058633.2|A730017C20Rik|ENSMUSG00000050875.5|RIKEN cDNA A730017C20 gene 	ENSMUST00000175897.1|A730017C20Rik|ENSMUSG00000050875.5|RIKEN cDNA A730017C20 gene 	ENSMUST00000118510.1|A730017C20Rik|ENSMUSG00000050875.5|RIKEN cDNA A730017C20 gene 	ENSMUST00000175830.1|A730017C20Rik|ENSMUSG00000050875.5|RIKEN cDNA A730017C20 gene
mm10_v2_chr1_+_160195215_160195303	1.82651	Scrt1	ENSMUST00000135680.1|Mrps14|ENSMUSG00000058267.7|mitochondrial ribosomal protein S14 	ENSMUST00000097193.2|Mrps14|ENSMUSG00000058267.7|mitochondrial ribosomal protein S14
mm10_v2_chr4_+_125066672_125066715	1.7573	Scrt1	ENSMUST00000052183.6|Snip1|ENSMUSG00000050213.6|Smad nuclear interacting protein 1
mm10_v2_chr2_-_5862923_5862923	1.71912	Scrt1	ENSMUST00000071016.2|Gm13199|ENSMUSG00000056718.2|predicted gene 13199
mm10_v2_chr1_+_52630692_52630757	1.71678	Scrt1	ENSMUST00000165859.1|Tmem194b|ENSMUSG00000043015.9|transmembrane protein 194B
mm10_v2_chr10_+_116301374_116301428	1.70494	Scrt1	ENSMUST00000092167.5|Ptprb|ENSMUSG00000020154.9|protein tyrosine phosphatase, receptor type, B
mm10_v2_chr1_-_156036473_156036480	1.69703	Scrt1	ENSMUST00000097527.3|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1 	ENSMUST00000027738.7|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr6_-_86669136_86669164	1.61137	Scrt1	ENSMUST00000001184.7|Mxd1|ENSMUSG00000001156.7|MAX dimerization protein 1
mm10_v2_chr16_-_85901118_85901133	1.58063	Scrt1	ENSMUST00000023611.5|Adamts5|ENSMUSG00000022894.5|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm10_v2_chrX_-_72274747_72274803	1.57601	Scrt1	ENSMUST00000064780.3|Gabre|ENSMUSG00000031340.8|gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
mm10_v2_chr11_+_99864476_99864476	1.56078	Scrt1	ENSMUST00000092694.3|Gm11559|ENSMUSG00000090225.1|predicted gene 11559
mm10_v2_chr10_-_107123585_107123673	1.55756	Scrt1	ENSMUST00000165067.1|Acss3|ENSMUSG00000035948.6|acyl-CoA synthetase short-chain family member 3 	ENSMUST00000044668.4|Acss3|ENSMUSG00000035948.6|acyl-CoA synthetase short-chain family member 3
mm10_v2_chr2_-_153529941_153529985	1.5267	Scrt1	ENSMUST00000035346.7|8430427H17Rik|ENSMUSG00000061411.6|RIKEN cDNA 8430427H17 gene
mm10_v2_chr15_-_78305603_78305603	1.5248	Scrt1	ENSMUST00000096356.3|Csf2rb2|ENSMUSG00000071714.5|colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage)
mm10_v2_chr1_+_131867224_131867272	1.51065	Scrt1	ENSMUST00000112386.1|Rab7l1|ENSMUSG00000026433.7|RAB7, member RAS oncogene family-like 1 	ENSMUST00000027693.7|Rab7l1|ENSMUSG00000026433.7|RAB7, member RAS oncogene family-like 1
mm10_v2_chr17_-_25844514_25844565	1.49041	Scrt1	ENSMUST00000176709.1|Rhot2|ENSMUSG00000025733.11|ras homolog gene family, member T2
mm10_v2_chr13_-_22042949_22042978	1.47825	Scrt1	ENSMUST00000091741.4|Hist1h2ag|ENSMUSG00000069301.4|histone cluster 1, H2ag
mm10_v2_chr13_+_22043189_22043214	1.46882	Scrt1	ENSMUST00000110452.1|Hist1h2bj|ENSMUSG00000069300.3|histone cluster 1, H2bj
mm10_v2_chr1_+_88227005_88227064	1.45972	Scrt1	ENSMUST00000061013.6|Mroh2a|ENSMUSG00000079429.3|maestro heat-like repeat family member 2A 	ENSMUST00000113130.1|Mroh2a|ENSMUSG00000079429.3|maestro heat-like repeat family member 2A
mm10_v2_chr17_-_25570678_25570694	1.4559	Scrt1	ENSMUST00000025003.3|Sox8|ENSMUSG00000024176.4|SRY-box containing gene 8 	ENSMUST00000173447.1|Sox8|ENSMUSG00000024176.4|SRY-box containing gene 8
mm10_v2_chr5_-_137611372_137611428	1.45568	Scrt1	ENSMUST00000054564.6|Pcolce|ENSMUSG00000029718.8|procollagen C-endopeptidase enhancer protein
mm10_v2_chr8_-_70700070_70700088	1.44801	Scrt1	ENSMUST00000116172.1|Gm11175|ENSMUSG00000080058.1|predicted gene 11175
mm10_v2_chr16_-_23225334_23225368	1.44196	Scrt1	ENSMUST00000055369.4|BC106179|ENSMUSG00000045231.4|cDNA sequence BC106179
mm10_v2_chr17_+_28272191_28272205	1.40131	Scrt1	ENSMUST00000169040.1|Ppard|ENSMUSG00000002250.9|peroxisome proliferator activator receptor delta
mm10_v2_chr19_-_8880883_8880933	1.38944	Scrt1	ENSMUST00000096253.5|AI462493|ENSMUSG00000071654.5|expressed sequence AI462493
mm10_v2_chr5_+_137629169_137629202	1.35747	Scrt1	ENSMUST00000176667.1|Lrch4|ENSMUSG00000093445.1|leucine-rich repeats and calponin homology (CH) domain containing 4
mm10_v2_chr5_-_137611429_137611487	1.34735	Scrt1	ENSMUST00000031731.7|Pcolce|ENSMUSG00000029718.8|procollagen C-endopeptidase enhancer protein
mm10_v2_chr17_-_65951156_65951199	1.34297	Scrt1	ENSMUST00000024906.4|Twsg1|ENSMUSG00000024098.5|twisted gastrulation homolog 1 (Drosophila)
mm10_v2_chr2_-_170427828_170427852	1.34251	Scrt1	ENSMUST00000013667.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000109152.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000068137.4|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1
mm10_v2_chr7_-_133782721_133782762	1.33435	Scrt1	ENSMUST00000063669.1|Dhx32|ENSMUSG00000030986.6|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm10_v2_chr7_-_65370908_65371015	1.32283	Scrt1	ENSMUST00000032729.6|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr5_-_116288944_116288977	1.29601	Scrt1	ENSMUST00000086483.3|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr4_+_111719975_111720047	1.28414	Scrt1	ENSMUST00000038868.7|Spata6|ENSMUSG00000034401.10|spermatogenesis associated 6 	ENSMUST00000070513.6|Spata6|ENSMUSG00000034401.10|spermatogenesis associated 6 	ENSMUST00000153746.1|Spata6|ENSMUSG00000034401.10|spermatogenesis associated 6
mm10_v2_chr4_+_98923845_98923893	1.27114	Scrt1	ENSMUST00000091358.4|Usp1|ENSMUSG00000028560.5|ubiquitin specific peptidase 1
mm10_v2_chr12_+_3572379_3572524	1.22177	Scrt1	ENSMUST00000173199.1|Dtnb|ENSMUSG00000071454.7|dystrobrevin, beta 	ENSMUST00000164578.2|Dtnb|ENSMUSG00000071454.7|dystrobrevin, beta 	ENSMUST00000174479.1|Dtnb|ENSMUSG00000071454.7|dystrobrevin, beta 	ENSMUST00000173240.1|Dtnb|ENSMUSG00000071454.7|dystrobrevin, beta 	ENSMUST00000174663.1|Dtnb|ENSMUSG00000071454.7|dystrobrevin, beta 	ENSMUST00000173736.1|Dtnb|ENSMUSG00000071454.7|dystrobrevin, beta
mm10_v2_chr2_-_28583189_28583230	1.20461	Scrt1	ENSMUST00000113889.2|Gtf3c5|ENSMUSG00000026816.8|general transcription factor IIIC, polypeptide 5
mm10_v2_chr5_-_31241215_31241243	1.20385	Scrt1	ENSMUST00000068997.3|Gm9970|ENSMUSG00000055424.3|predicted gene 9970
mm10_v2_chr3_-_95687846_95687917	1.19443	Scrt1	ENSMUST00000015994.3|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000148854.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000117782.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4
mm10_v2_chr6_+_146888481_146888589	1.18891	Scrt1	ENSMUST00000016631.7|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENSMUST00000111623.2|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm10_v2_chrX_+_169879596_169879664	1.17214	Scrt1	ENSMUST00000112105.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000078947.5|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr16_+_20696175_20696211	1.15893	Scrt1	ENSMUST00000128273.1|Fam131a|ENSMUSG00000050821.7|family with sequence similarity 131, member A
mm10_v2_chr4_-_151044564_151044691	1.14753	Scrt1	ENSMUST00000103204.4|Per3|ENSMUSG00000028957.6|period circadian clock 3
mm10_v2_chr2_+_150909565_150909642	1.14501	Scrt1	ENSMUST00000028948.4|Gins1|ENSMUSG00000027454.4|GINS complex subunit 1 (Psf1 homolog)
mm10_v2_chr9_+_110880157_110880187	1.13324	Scrt1	ENSMUST00000084926.2|Als2cl|ENSMUSG00000044037.9|ALS2 C-terminal like
mm10_v2_chr18_+_48045329_48045348	1.12824	Scrt1	ENSMUST00000076155.4|Gm5506|ENSMUSG00000059040.4|predicted gene 5506
mm10_v2_chr9_+_6168638_6168671	1.09085	Scrt1	ENSMUST00000058692.7|Pdgfd|ENSMUSG00000032006.8|platelet-derived growth factor, D polypeptide
mm10_v2_chr19_+_6335093_6335113	1.08571	Scrt1	ENSMUST00000078137.5|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1
mm10_v2_chr13_-_74482943_74482943	1.08134	Scrt1	ENSMUST00000074369.6|Zfp825|ENSMUSG00000069208.5|zinc finger protein 825
mm10_v2_chr8_-_119558718_119558766	1.08013	Scrt1	ENSMUST00000081381.4|Mbtps1|ENSMUSG00000031835.9|membrane-bound transcription factor peptidase, site 1 	ENSMUST00000098362.3|Mbtps1|ENSMUSG00000031835.9|membrane-bound transcription factor peptidase, site 1
mm10_v2_chr3_-_133091764_133091783	1.05959	Scrt1	ENSMUST00000029651.4|Gstcd|ENSMUSG00000028018.9|glutathione S-transferase, C-terminal domain containing
mm10_v2_chr19_+_6364557_6364668	1.05766	Scrt1	ENSMUST00000155973.1|Sf1|ENSMUSG00000024949.11|splicing factor 1
mm10_v2_chr14_+_54883377_54883507	1.04819	Scrt1	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr18_+_24205303_24205348	1.00746	Scrt1	ENSMUST00000000430.7|Galnt1|ENSMUSG00000000420.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
mm10_v2_chr11_-_115187827_115187844	1.00075	Scrt1	ENSMUST00000103041.1|Nat9|ENSMUSG00000015542.11|N-acetyltransferase 9 (GCN5-related, putative)
mm10_v2_chr11_+_102881204_102881246	0.990418	Scrt1	ENSMUST00000021307.3|Ccdc103|ENSMUSG00000020930.3|coiled-coil domain containing 103 	ENSMUST00000159834.1|Ccdc103|ENSMUSG00000020930.3|coiled-coil domain containing 103
mm10_v2_chr3_-_151749877_151749919	0.966735	Scrt1	ENSMUST00000029671.7|Ifi44|ENSMUSG00000028037.7|interferon-induced protein 44
mm10_v2_chr11_-_102880981_102880992	0.949712	Scrt1	ENSMUST00000107060.1|Eftud2|ENSMUSG00000020929.8|elongation factor Tu GTP binding domain containing 2
mm10_v2_chr16_+_23226014_23226077	0.948175	Scrt1	ENSMUST00000178797.1|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr17_-_55712571_55712630	0.948015	Scrt1	ENSMUST00000086876.5|Pot1b|ENSMUSG00000024174.8|protection of telomeres 1B
mm10_v2_chr3_-_133092029_133092039	0.944604	Scrt1	ENSMUST00000080583.5|Gstcd|ENSMUSG00000028018.9|glutathione S-transferase, C-terminal domain containing
mm10_v2_chr6_-_124779686_124779742	0.936031	Scrt1	ENSMUST00000147669.1|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000128697.1|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000032218.3|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23 	ENSMUST00000112475.2|Lrrc23|ENSMUSG00000030125.5|leucine rich repeat containing 23
mm10_v2_chr9_-_22117123_22117174	0.92844	Scrt1	ENSMUST00000013966.6|Elof1|ENSMUSG00000013822.6|elongation factor 1 homolog (ELF1, S. cerevisiae)
mm10_v2_chr12_-_17011727_17011727	0.919534	Scrt1	ENSMUST00000095823.2|2410004P03Rik|ENSMUSG00000071398.2|RIKEN cDNA 2410004P03 gene
mm10_v2_chr4_+_111720187_111720205	0.918785	Scrt1	ENSMUST00000084354.3|Spata6|ENSMUSG00000034401.10|spermatogenesis associated 6
mm10_v2_chr2_-_39005574_39005625	0.913199	Scrt1	ENSMUST00000080861.5|Rpl35|ENSMUSG00000062997.6|ribosomal protein L35
mm10_v2_chr6_-_53820764_53820837	0.893402	Scrt1	ENSMUST00000127748.2|Tril|ENSMUSG00000043496.5|TLR4 interactor with leucine-rich repeats
mm10_v2_chr4_+_98923908_98923976	0.880256	Scrt1	ENSMUST00000169053.1|Usp1|ENSMUSG00000028560.5|ubiquitin specific peptidase 1
mm10_v2_chr11_-_119355484_119355536	0.873203	Scrt1	ENSMUST00000100172.2|Sgsh|ENSMUSG00000005043.7|N-sulfoglucosamine sulfohydrolase (sulfamidase) 	ENSMUST00000005173.4|Sgsh|ENSMUSG00000005043.7|N-sulfoglucosamine sulfohydrolase (sulfamidase)
mm10_v2_chr18_+_24205722_24205767	0.865371	Scrt1	ENSMUST00000170243.1|Galnt1|ENSMUSG00000000420.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
mm10_v2_chr19_+_6334979_6335070	0.853725	Scrt1	ENSMUST00000113504.3|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113502.3|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000079327.5|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000056391.8|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113501.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113500.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000166909.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1
mm10_v2_chr5_-_138171248_138171274	0.853405	Scrt1	ENSMUST00000153867.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr4_-_135494615_135494628	0.846785	Scrt1	ENSMUST00000102549.3|Nipal3|ENSMUSG00000028803.12|NIPA-like domain containing 3
mm10_v2_chr11_+_68968107_68968175	0.827897	Scrt1	ENSMUST00000102606.3|Slc25a35|ENSMUSG00000018740.8|solute carrier family 25, member 35 	ENSMUST00000018884.5|Slc25a35|ENSMUSG00000018740.8|solute carrier family 25, member 35
mm10_v2_chr19_-_5388656_5388703	0.824962	Scrt1	ENSMUST00000044207.4|Sart1|ENSMUSG00000039148.4|squamous cell carcinoma antigen recognized by T cells 1
mm10_v2_chr7_-_19399859_19399921	0.802773	Scrt1	ENSMUST00000047170.3|Klc3|ENSMUSG00000040714.7|kinesin light chain 3 	ENSMUST00000108459.2|Klc3|ENSMUSG00000040714.7|kinesin light chain 3
mm10_v2_chr6_-_85765744_85765744	0.792444	Scrt1	ENSMUST00000050780.7|Cml3|ENSMUSG00000051262.8|camello-like 3
mm10_v2_chr11_-_102880925_102880977	0.786919	Scrt1	ENSMUST00000021306.7|Eftud2|ENSMUSG00000020929.8|elongation factor Tu GTP binding domain containing 2
mm10_v2_chr1_-_165194310_165194433	0.782637	Scrt1	ENSMUST00000043338.4|Sft2d2|ENSMUSG00000040848.6|SFT2 domain containing 2
mm10_v2_chr11_-_55419898_55419915	0.764116	Scrt1	ENSMUST00000108858.1|Sparc|ENSMUSG00000018593.6|secreted acidic cysteine rich glycoprotein 	ENSMUST00000141530.1|Sparc|ENSMUSG00000018593.6|secreted acidic cysteine rich glycoprotein
mm10_v2_chr11_+_87592897_87593006	0.760531	Scrt1	ENSMUST00000119628.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr4_+_109676568_109676590	0.747751	Scrt1	ENSMUST00000102724.4|Faf1|ENSMUSG00000010517.7|Fas-associated factor 1
mm10_v2_chr3_+_133091840_133091907	0.685436	Scrt1	ENSMUST00000029650.8|Ints12|ENSMUSG00000028016.8|integrator complex subunit 12
mm10_v2_chr15_+_80948484_80948549	0.668522	Scrt1	ENSMUST00000023043.2|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000168756.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000164806.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase
mm10_v2_chr2_+_112265809_112265858	0.663453	Scrt1	ENSMUST00000110991.2|Slc12a6|ENSMUSG00000027130.9|solute carrier family 12, member 6
mm10_v2_chr19_-_21652779_21652976	0.65604	Scrt1	ENSMUST00000179768.1|1110059E24Rik|ENSMUSG00000035171.3|RIKEN cDNA 1110059E24 gene 	ENSMUST00000178523.1|1110059E24Rik|ENSMUSG00000035171.3|RIKEN cDNA 1110059E24 gene 	ENSMUST00000038830.3|1110059E24Rik|ENSMUSG00000035171.3|RIKEN cDNA 1110059E24 gene
mm10_v2_chr9_-_13245741_13245741	0.655353	Scrt1	ENSMUST00000110582.2|Jrkl|ENSMUSG00000079083.2|jerky homolog-like (mouse)
mm10_v2_chr1_+_164503306_164503330	0.649722	Scrt1	ENSMUST00000181831.1|Gm26685|ENSMUSG00000097281.1|predicted gene, 26685
mm10_v2_chr14_-_70642268_70642268	0.648259	Scrt1	ENSMUST00000022697.5|Fgf17|ENSMUSG00000022101.5|fibroblast growth factor 17
mm10_v2_chr11_+_101070012_101070121	0.64725	Scrt1	ENSMUST00000001802.9|Naglu|ENSMUSG00000001751.9|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm10_v2_chr4_-_135494499_135494583	0.629333	Scrt1	ENSMUST00000105856.2|Nipal3|ENSMUSG00000028803.12|NIPA-like domain containing 3
mm10_v2_chr17_-_35115428_35115520	0.620761	Scrt1	ENSMUST00000172854.1|Ly6g5b|ENSMUSG00000043807.6|lymphocyte antigen 6 complex, locus G5B 	ENSMUST00000062657.4|Ly6g5b|ENSMUSG00000043807.6|lymphocyte antigen 6 complex, locus G5B
mm10_v2_chr11_+_101425068_101425114	0.606835	Scrt1	ENSMUST00000040561.5|Rundc1|ENSMUSG00000035007.5|RUN domain containing 1
mm10_v2_chr1_-_121332571_121332589	0.599344	Scrt1	ENSMUST00000071064.6|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr19_-_10880370_10880411	0.597975	Scrt1	ENSMUST00000133303.1|Tmem109|ENSMUSG00000034659.8|transmembrane protein 109
mm10_v2_chr15_-_76014318_76014346	0.591311	Scrt1	ENSMUST00000060807.5|Fam83h|ENSMUSG00000046761.6|family with sequence similarity 83, member H
mm10_v2_chr11_+_116848901_116848901	0.564225	Scrt1	ENSMUST00000143184.1|Mettl23|ENSMUSG00000090266.4|methyltransferase like 23
mm10_v2_chr2_-_62646146_62646234	0.558133	Scrt1	ENSMUST00000112459.3|Ifih1|ENSMUSG00000026896.8|interferon induced with helicase C domain 1 	ENSMUST00000028259.5|Ifih1|ENSMUSG00000026896.8|interferon induced with helicase C domain 1
mm10_v2_chr2_-_30830333_30830333	0.532078	Scrt1	ENSMUST00000041726.3|Asb6|ENSMUSG00000039483.4|ankyrin repeat and SOCS box-containing 6
mm10_v2_chr10_-_81266906_81266934	0.51475	Scrt1	ENSMUST00000046114.4|Mrpl54|ENSMUSG00000034932.4|mitochondrial ribosomal protein L54
mm10_v2_chr6_-_148831448_148831494	0.500057	Scrt1	ENSMUST00000048418.7|Ipo8|ENSMUSG00000040029.8|importin 8
mm10_v2_chr9_+_97179153_97179179	0.432589	Scrt1	ENSMUST00000177657.1|Rpl7a-ps10|ENSMUSG00000094089.1|ribosomal protein L7A, pseudogene 10
mm10_v2_chr19_+_37436707_37436739	0.426113	Scrt1	ENSMUST00000128184.1|Hhex|ENSMUSG00000024986.5|hematopoietically expressed homeobox
mm10_v2_chr3_-_95315086_95315117	0.416221	Scrt1	ENSMUST00000098867.3|Gm10691|ENSMUSG00000074414.3|predicted gene 10691
mm10_v2_chr15_-_98004634_98004657	0.414292	Scrt1	ENSMUST00000131560.1|Col2a1|ENSMUSG00000022483.10|collagen, type II, alpha 1 	ENSMUST00000088355.5|Col2a1|ENSMUSG00000022483.10|collagen, type II, alpha 1
mm10_v2_chr5_-_138171813_138171818	0.410133	Scrt1	ENSMUST00000155902.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae) 	ENSMUST00000148879.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr10_-_61979073_61979108	0.403903	Scrt1	ENSMUST00000105453.1|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1 	ENSMUST00000105452.2|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1 	ENSMUST00000105454.2|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1
mm10_v2_chr16_-_17838173_17838364	0.394894	Scrt1	ENSMUST00000118960.1|Car15|ENSMUSG00000090236.2|carbonic anhydrase 15
mm10_v2_chrX_+_74429671_74429763	0.394281	Scrt1	ENSMUST00000114127.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000064407.3|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma 	ENSMUST00000156707.1|Ikbkg|ENSMUSG00000004221.10|inhibitor of kappaB kinase gamma
mm10_v2_chr4_-_70410422_70410463	0.387188	Scrt1	ENSMUST00000144099.1|Cdk5rap2|ENSMUSG00000039298.10|CDK5 regulatory subunit associated protein 2
mm10_v2_chr5_+_136116631_136116740	0.363075	Scrt1	ENSMUST00000111127.1|Polr2j|ENSMUSG00000039771.7|polymerase (RNA) II (DNA directed) polypeptide J 	ENSMUST00000041366.7|Polr2j|ENSMUSG00000039771.7|polymerase (RNA) II (DNA directed) polypeptide J 	ENSMUST00000111129.1|Polr2j|ENSMUSG00000039771.7|polymerase (RNA) II (DNA directed) polypeptide J
mm10_v2_chr1_+_75521521_75521602	0.356685	Scrt1	ENSMUST00000027414.9|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein 	ENSMUST00000113553.1|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein
mm10_v2_chr5_-_116288978_116288999	0.351237	Scrt1	ENSMUST00000050178.6|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr4_+_139622842_139622902	0.350821	Scrt1	ENSMUST00000039818.9|Aldh4a1|ENSMUSG00000028737.9|aldehyde dehydrogenase 4 family, member A1
mm10_v2_chr19_-_5688149_5688149	0.346261	Scrt1	ENSMUST00000068169.5|Pcnxl3|ENSMUSG00000054874.6|pecanex-like 3 (Drosophila)
mm10_v2_chr4_+_86575668_86575689	0.345536	Scrt1	ENSMUST00000091064.6|Rraga|ENSMUSG00000070934.5|Ras-related GTP binding A
mm10_v2_chr9_-_121857952_121858012	0.343163	Scrt1	ENSMUST00000060251.6|Higd1a|ENSMUSG00000038412.7|HIG1 domain family, member 1A
mm10_v2_chr7_+_141447645_141447850	0.337133	Scrt1	ENSMUST00000106004.1|Rplp2|ENSMUSG00000025508.7|ribosomal protein, large P2 	ENSMUST00000106003.1|Rplp2|ENSMUSG00000025508.7|ribosomal protein, large P2
mm10_v2_chr3_+_90600203_90600219	0.335636	Scrt1	ENSMUST00000001047.7|S100a3|ENSMUSG00000001021.8|S100 calcium binding protein A3
mm10_v2_chr13_+_60601921_60602039	0.329806	Scrt1	ENSMUST00000077453.5|Dapk1|ENSMUSG00000021559.7|death associated protein kinase 1
mm10_v2_chr5_-_148995147_148995173	0.324479	Scrt1	ENSMUST00000147473.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr13_+_99100698_99100719	0.320552	Scrt1	ENSMUST00000181742.1|Gm807|ENSMUSG00000097848.1|predicted gene 807
mm10_v2_chr7_-_139683797_139683853	0.304806	Scrt1	ENSMUST00000129990.1|9330101J02Rik|ENSMUSG00000049571.10|RIKEN cDNA 9330101J02 gene 	ENSMUST00000130453.1|9330101J02Rik|ENSMUSG00000049571.10|RIKEN cDNA 9330101J02 gene
mm10_v2_chr5_+_118169712_118169748	0.298757	Scrt1	ENSMUST00000054836.6|Hrk|ENSMUSG00000046607.6|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm10_v2_chr2_-_92370968_92370992	0.293894	Scrt1	ENSMUST00000176774.1|Gyltl1b|ENSMUSG00000040434.10|glycosyltransferase-like 1B
mm10_v2_chr6_+_21985903_21985972	0.282937	Scrt1	ENSMUST00000137437.1|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1 	ENSMUST00000115383.2|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1
mm10_v2_chr9_-_110880052_110880113	0.272127	Scrt1	ENSMUST00000050958.4|Tmie|ENSMUSG00000049555.6|transmembrane inner ear
mm10_v2_chr6_-_148831395_148831426	0.270754	Scrt1	ENSMUST00000145960.1|Ipo8|ENSMUSG00000040029.8|importin 8
mm10_v2_chr3_+_107036156_107036181	0.270056	Scrt1	ENSMUST00000052718.3|Kcna3|ENSMUSG00000047959.3|potassium voltage-gated channel, shaker-related subfamily, member 3
mm10_v2_chr5_+_146832890_146832947	0.261068	Scrt1	ENSMUST00000035983.5|Rpl21|ENSMUSG00000041453.6|ribosomal protein L21
mm10_v2_chr6_-_33060256_33060267	0.260802	Scrt1	ENSMUST00000066379.4|Chchd3|ENSMUSG00000053768.7|coiled-coil-helix-coiled-coil-helix domain containing 3
mm10_v2_chr14_+_76476913_76476930	0.256049	Scrt1	ENSMUST00000140251.2|Tsc22d1|ENSMUSG00000022010.13|TSC22 domain family, member 1
mm10_v2_chr11_+_28853189_28853259	0.248434	Scrt1	ENSMUST00000020759.5|Efemp1|ENSMUSG00000020467.9|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm10_v2_chr16_-_17561240_17561254	0.238007	Scrt1	ENSMUST00000065125.5|4930451C15Rik|ENSMUSG00000022759.7|RIKEN cDNA 4930451C15 gene 	ENSMUST00000100123.3|4930451C15Rik|ENSMUSG00000022759.7|RIKEN cDNA 4930451C15 gene 	ENSMUST00000023442.6|4930451C15Rik|ENSMUSG00000022759.7|RIKEN cDNA 4930451C15 gene
mm10_v2_chr1_-_121332545_121332568	0.229882	Scrt1	ENSMUST00000161068.1|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr14_+_8080315_8080385	0.22748	Scrt1	ENSMUST00000023924.3|Rpp14|ENSMUSG00000023156.3|ribonuclease P 14 subunit
mm10_v2_chr5_-_138171216_138171246	0.208104	Scrt1	ENSMUST00000147920.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr11_-_40695203_40695223	0.206454	Scrt1	ENSMUST00000101347.3|Mat2b|ENSMUSG00000042032.7|methionine adenosyltransferase II, beta
mm10_v2_chr16_+_4741543_4741592	0.167384	Scrt1	ENSMUST00000120232.1|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2
mm10_v2_chr18_-_3281712_3281747	0.15145	Scrt1	ENSMUST00000182204.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000154705.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000182833.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000151084.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr18_-_3281036_3281132	0.150721	Scrt1	ENSMUST00000049942.6|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000139537.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000124747.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr4_-_45084538_45084604	0.138889	Scrt1	ENSMUST00000052236.6|Fbxo10|ENSMUSG00000048232.6|F-box protein 10
mm10_v2_chr2_+_25218741_25218750	0.134928	Scrt1	ENSMUST00000028346.3|Fam166a|ENSMUSG00000026969.3|family with sequence similarity 166, member A
mm10_v2_chr7_+_81523555_81523618	0.134746	Scrt1	ENSMUST00000180385.1|2900076A07Rik|ENSMUSG00000097277.1|RIKEN cDNA 2900076A07 gene 	ENSMUST00000180879.1|2900076A07Rik|ENSMUSG00000097277.1|RIKEN cDNA 2900076A07 gene 	ENSMUST00000181164.1|2900076A07Rik|ENSMUSG00000097277.1|RIKEN cDNA 2900076A07 gene 	ENSMUST00000181264.1|2900076A07Rik|ENSMUSG00000097277.1|RIKEN cDNA 2900076A07 gene
mm10_v2_chr13_-_17805093_17805189	0.0754141	Scrt1	ENSMUST00000042365.7|Cdk13|ENSMUSG00000041297.7|cyclin-dependent kinase 13
mm10_v2_chr9_+_110333402_110333636	0.0603229	Scrt1	ENSMUST00000133114.1|Scap|ENSMUSG00000032485.8|SREBF chaperone 	ENSMUST00000125759.1|Scap|ENSMUSG00000032485.8|SREBF chaperone
mm10_v2_chr7_+_141328122_141328139	0.0598723	Scrt1	ENSMUST00000133012.1|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80 	ENSMUST00000026578.7|Tmem80|ENSMUSG00000025505.10|transmembrane protein 80
mm10_v2_chr9_+_107888129_107888211	0.0592844	Scrt1	ENSMUST00000035202.2|Mon1a|ENSMUSG00000032583.2|MON1 homolog A (yeast)
mm10_v2_chr12_-_40134175_40134228	0.0486572	Scrt1	ENSMUST00000078481.7|Scin|ENSMUSG00000002565.10|scinderin 	ENSMUST00000002640.5|Scin|ENSMUSG00000002565.10|scinderin
mm10_v2_chr11_+_3332426_3332460	0.0220293	Scrt1	ENSMUST00000136474.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr12_+_105563123_105563172	0.0189856	Scrt1	ENSMUST00000001652.5|Bdkrb2|ENSMUSG00000021070.5|bradykinin receptor, beta 2
mm10_v2_chr12_+_3572528_3572548	0.0097392	Scrt1	ENSMUST00000173998.1|Dtnb|ENSMUSG00000071454.7|dystrobrevin, beta
mm10_v2_chr16_+_31663935_31664039	0.0071603	Scrt1	ENSMUST00000100001.3|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila) 	ENSMUST00000064477.7|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila)
mm10_v2_chr7_+_44816088_44816088	0.00665356	Scrt1	ENSMUST00000057195.9|Nup62|ENSMUSG00000043858.11|nucleoporin 62 	ENSMUST00000107891.1|Nup62|ENSMUSG00000043858.11|nucleoporin 62
mm10_v2_chr3_-_90433603_90433636	0.00389249	Scrt1	ENSMUST00000029542.5|Ints3|ENSMUSG00000027933.5|integrator complex subunit 3 	ENSMUST00000071488.3|Ints3|ENSMUSG00000027933.5|integrator complex subunit 3
