mm10_v2_chr6_-_23248264_23248390	4.47374	Six4	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr7_-_137314394_137314445	2.1388	Six4	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr6_+_7555053_7555096	1.7934	Six4	ENSMUST00000090679.2|Tac1|ENSMUSG00000061762.6|tachykinin 1 	ENSMUST00000184986.1|Tac1|ENSMUSG00000061762.6|tachykinin 1
mm10_v2_chr7_+_29307924_29308057	1.18265	Six4	ENSMUST00000108230.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1 	ENSMUST00000065181.5|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr8_+_62951361_62951498	1.11007	Six4	ENSMUST00000119068.1|Spock3|ENSMUSG00000054162.9|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
mm10_v2_chr13_+_54071815_54071859	1.0992	Six4	ENSMUST00000021930.8|Sfxn1|ENSMUSG00000021474.8|sideroflexin 1
mm10_v2_chr7_+_29309429_29309513	1.09703	Six4	ENSMUST00000137848.1|Dpf1|ENSMUSG00000030584.7|D4, zinc and double PHD fingers family 1
mm10_v2_chr15_+_92051153_92051170	1.07247	Six4	ENSMUST00000169825.1|Cntn1|ENSMUSG00000055022.8|contactin 1
mm10_v2_chr7_-_143460989_143461050	1.02876	Six4	ENSMUST00000167912.1|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57) 	ENSMUST00000037287.6|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57)
mm10_v2_chr11_+_67078293_67078307	0.952335	Six4	ENSMUST00000108689.1|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic 	ENSMUST00000165221.1|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic 	ENSMUST00000007301.7|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic
mm10_v2_chr15_-_79834323_79834334	0.910426	Six4	ENSMUST00000177316.2|Nptxr|ENSMUSG00000022421.12|neuronal pentraxin receptor 	ENSMUST00000175858.2|Nptxr|ENSMUSG00000022421.12|neuronal pentraxin receptor
mm10_v2_chr2_+_119351222_119351233	0.845714	Six4	ENSMUST00000028780.3|Chac1|ENSMUSG00000027313.3|ChaC, cation transport regulator 1
mm10_v2_chr8_-_84237042_84237061	0.784213	Six4	ENSMUST00000039480.5|Zswim4|ENSMUSG00000035671.5|zinc finger SWIM-type containing 4
mm10_v2_chr8_-_85067982_85067982	0.750159	Six4	ENSMUST00000177563.1|Gm5741|ENSMUSG00000095845.1|predicted gene 5741
mm10_v2_chr8_+_95703037_95703063	0.704692	Six4	ENSMUST00000073139.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4 	ENSMUST00000080666.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4
mm10_v2_chr4_-_134018829_134018841	0.703685	Six4	ENSMUST00000051674.2|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr13_-_9878998_9878998	0.620833	Six4	ENSMUST00000063093.9|Chrm3|ENSMUSG00000046159.9|cholinergic receptor, muscarinic 3, cardiac
mm10_v2_chr1_-_78968079_78968079	0.545274	Six4	ENSMUST00000049117.5|Gm5830|ENSMUSG00000072978.2|predicted pseudogene 5830
mm10_v2_chr6_+_50110186_50110383	0.436964	Six4	ENSMUST00000166318.1|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036236.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036225.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm10_v2_chr12_-_57546121_57546141	0.436876	Six4	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr3_+_145938004_145938063	0.370277	Six4	ENSMUST00000039571.7|2410004B18Rik|ENSMUSG00000036873.7|RIKEN cDNA 2410004B18 gene
mm10_v2_chr11_+_3989924_3989946	0.366349	Six4	ENSMUST00000109981.1|Gal3st1|ENSMUSG00000049721.8|galactose-3-O-sulfotransferase 1
mm10_v2_chr5_-_145191511_145191548	0.349378	Six4	ENSMUST00000161845.1|Atp5j2|ENSMUSG00000038690.9|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
mm10_v2_chr15_-_66831625_66831668	0.324325	Six4	ENSMUST00000164163.1|Sla|ENSMUSG00000022372.8|src-like adaptor
mm10_v2_chr19_+_8764934_8765034	0.321171	Six4	ENSMUST00000184663.1|Nxf1|ENSMUSG00000010097.7|nuclear RNA export factor 1
mm10_v2_chr17_-_48409729_48409906	0.313822	Six4	ENSMUST00000160319.1|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000159535.1|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000078800.6|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000046719.7|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000162460.1|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha
mm10_v2_chr3_+_40950631_40950657	0.281073	Six4	ENSMUST00000048490.6|Larp1b|ENSMUSG00000037814.9|La ribonucleoprotein domain family, member 1B
mm10_v2_chr7_+_38183787_38183869	0.278651	Six4	ENSMUST00000067854.8|1600014C10Rik|ENSMUSG00000054676.9|RIKEN cDNA 1600014C10 gene 	ENSMUST00000177983.1|1600014C10Rik|ENSMUSG00000054676.9|RIKEN cDNA 1600014C10 gene
mm10_v2_chr1_+_37890477_37890542	0.262915	Six4	ENSMUST00000027256.5|Mrpl30|ENSMUSG00000026087.5|mitochondrial ribosomal protein L30
mm10_v2_chr13_+_51645232_51645276	0.237286	Six4	ENSMUST00000075853.5|Cks2|ENSMUSG00000062248.5|CDC28 protein kinase regulatory subunit 2
mm10_v2_chr1_+_74284930_74285072	0.22217	Six4	ENSMUST00000113805.1|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000027370.6|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000087226.4|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia
mm10_v2_chr10_-_80918212_80918256	0.211342	Six4	ENSMUST00000057623.7|Lmnb2|ENSMUSG00000062075.7|lamin B2 	ENSMUST00000179022.1|Lmnb2|ENSMUSG00000062075.7|lamin B2
mm10_v2_chr15_-_79834224_79834245	0.194766	Six4	ENSMUST00000109623.1|Cbx6|ENSMUSG00000089715.5|chromobox 6 	ENSMUST00000023060.6|Npcd|ENSMUSG00000089837.3|neuronal pentraxin chromo domain 	ENSMUST00000089299.5|Npcd|ENSMUSG00000089837.3|neuronal pentraxin chromo domain 	ENSMUST00000109625.1|Cbx6|ENSMUSG00000089715.5|chromobox 6
mm10_v2_chr17_+_48409980_48410104	0.185958	Six4	ENSMUST00000167180.1|Oard1|ENSMUSG00000040771.7|O-acyl-ADP-ribose deacylase 1 	ENSMUST00000046651.6|Oard1|ENSMUSG00000040771.7|O-acyl-ADP-ribose deacylase 1
mm10_v2_chr2_+_131133497_131133497	0.174249	Six4	ENSMUST00000110225.1|Gm11037|ENSMUSG00000079039.1|predicted gene 11037
mm10_v2_chr6_+_124931378_124931425	0.157893	Six4	ENSMUST00000032214.7|Mlf2|ENSMUSG00000030120.8|myeloid leukemia factor 2 	ENSMUST00000180095.1|Mlf2|ENSMUSG00000030120.8|myeloid leukemia factor 2
mm10_v2_chr8_+_94214567_94214608	0.155326	Six4	ENSMUST00000079961.6|Nup93|ENSMUSG00000032939.7|nucleoporin 93
mm10_v2_chr1_-_74284636_74284738	0.148552	Six4	ENSMUST00000178235.1|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein 	ENSMUST00000006462.7|Aamp|ENSMUSG00000006299.7|angio-associated migratory protein
mm10_v2_chr1_+_171839694_171839699	0.127298	Six4	ENSMUST00000155802.1|Cd84|ENSMUSG00000038147.7|CD84 antigen
mm10_v2_chr17_+_24896488_24896530	0.102541	Six4	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr17_+_35049966_35049966	0.0848386	Six4	ENSMUST00000007257.9|Clic1|ENSMUSG00000007041.9|chloride intracellular channel 1
mm10_v2_chrX_-_139714481_139714507	0.0801639	Six4	ENSMUST00000183728.1|Gm15013|ENSMUSG00000098559.1|predicted gene 15013
mm10_v2_chr9_-_70503718_70503805	0.064946	Six4	ENSMUST00000034739.5|Rnf111|ENSMUSG00000032217.6|ring finger 111
mm10_v2_chr12_-_21417356_21417436	0.0618676	Six4	ENSMUST00000103002.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr14_-_89898466_89898466	0.0610976	Six4	ENSMUST00000081204.4|Gm10110|ENSMUSG00000062093.4|predicted gene 10110
mm10_v2_chr2_-_93452679_93452687	0.0448487	Six4	ENSMUST00000111257.1|Cd82|ENSMUSG00000027215.7|CD82 antigen 	ENSMUST00000145553.1|Cd82|ENSMUSG00000027215.7|CD82 antigen
mm10_v2_chr16_+_11405648_11405713	0.0398419	Six4	ENSMUST00000096273.2|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr15_-_79834261_79834285	0.0338962	Six4	ENSMUST00000148358.1|Cbx6|ENSMUSG00000089715.5|chromobox 6
mm10_v2_chr2_-_91444622_91444726	0.0310747	Six4	ENSMUST00000064652.7|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000102594.4|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000094835.2|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene
mm10_v2_chr1_-_37890333_37890416	0.0193169	Six4	ENSMUST00000139725.1|Mitd1|ENSMUSG00000026088.9|MIT, microtubule interacting and transport, domain containing 1 	ENSMUST00000027257.8|Mitd1|ENSMUSG00000026088.9|MIT, microtubule interacting and transport, domain containing 1
mm10_v2_chr19_-_6980420_6980481	0.00325315	Six4	ENSMUST00000070878.8|Fkbp2|ENSMUSG00000056629.9|FK506 binding protein 2 	ENSMUST00000177752.1|Fkbp2|ENSMUSG00000056629.9|FK506 binding protein 2
