mm10_v2_chr5_+_24985840_24985862	0.695168	Zkscan3	ENSMUST00000075081.6|1500035N22Rik|ENSMUSG00000059631.6|RIKEN cDNA 1500035N22 gene
mm10_v2_chr18_+_61105844_61105890	0.525178	Zkscan3	ENSMUST00000115268.3|Csf1r|ENSMUSG00000024621.9|colony stimulating factor 1 receptor
mm10_v2_chr6_-_122856151_122856163	0.509189	Zkscan3	ENSMUST00000042081.8|C3ar1|ENSMUSG00000040552.8|complement component 3a receptor 1
mm10_v2_chr18_+_82554463_82554583	0.36246	Zkscan3	ENSMUST00000062446.7|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000102812.4|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000075372.5|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000080658.4|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000152071.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000114674.3|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000142850.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000133193.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000123251.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000153478.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000132369.1|Mbp|ENSMUSG00000041607.10|myelin basic protein
mm10_v2_chr11_-_75422524_75422561	0.325157	Zkscan3	ENSMUST00000125982.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1 	ENSMUST00000137103.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm10_v2_chr8_+_31091593_31091650	0.324495	Zkscan3	ENSMUST00000161713.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr8_+_94810446_94810461	0.294606	Zkscan3	ENSMUST00000034232.1|Ccl17|ENSMUSG00000031780.1|chemokine (C-C motif) ligand 17
mm10_v2_chr13_-_32851176_32851186	0.25846	Zkscan3	ENSMUST00000091668.5|Serpinb1a|ENSMUSG00000044734.9|serine (or cysteine) peptidase inhibitor, clade B, member 1a 	ENSMUST00000076352.6|Serpinb1a|ENSMUSG00000044734.9|serine (or cysteine) peptidase inhibitor, clade B, member 1a
mm10_v2_chr8_+_70616816_70616930	0.234417	Zkscan3	ENSMUST00000052437.3|Lrrc25|ENSMUSG00000049988.3|leucine rich repeat containing 25
mm10_v2_chr8_-_105758570_105758664	0.213165	Zkscan3	ENSMUST00000155038.2|Gfod2|ENSMUSG00000013150.9|glucose-fructose oxidoreductase domain containing 2 	ENSMUST00000013294.9|Gfod2|ENSMUSG00000013150.9|glucose-fructose oxidoreductase domain containing 2
mm10_v2_chr8_-_116978908_116978997	0.211451	Zkscan3	ENSMUST00000070577.5|1700030J22Rik|ENSMUSG00000031847.7|RIKEN cDNA 1700030J22 gene
mm10_v2_chr8_+_106893616_106893696	0.201081	Zkscan3	ENSMUST00000047629.5|Cirh1a|ENSMUSG00000041438.7|cirrhosis, autosomal recessive 1A (human)
mm10_v2_chr13_-_38658991_38659038	0.199917	Zkscan3	ENSMUST00000001757.7|Eef1e1|ENSMUSG00000001707.7|eukaryotic translation elongation factor 1 epsilon 1
mm10_v2_chr2_-_66634952_66634952	0.19829	Zkscan3	ENSMUST00000100064.2|Scn9a|ENSMUSG00000075316.5|sodium channel, voltage-gated, type IX, alpha 	ENSMUST00000100063.2|Scn9a|ENSMUSG00000075316.5|sodium channel, voltage-gated, type IX, alpha
mm10_v2_chr11_-_75422586_75422701	0.197299	Zkscan3	ENSMUST00000138661.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1 	ENSMUST00000000769.7|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm10_v2_chr4_+_139192899_139192941	0.189451	Zkscan3	ENSMUST00000102508.3|Capzb|ENSMUSG00000028745.12|capping protein (actin filament) muscle Z-line, beta 	ENSMUST00000131912.1|Capzb|ENSMUSG00000028745.12|capping protein (actin filament) muscle Z-line, beta 	ENSMUST00000102507.3|Capzb|ENSMUSG00000028745.12|capping protein (actin filament) muscle Z-line, beta
mm10_v2_chr13_-_19395728_19395789	0.178573	Zkscan3	ENSMUST00000039694.7|Stard3nl|ENSMUSG00000003062.8|STARD3 N-terminal like
mm10_v2_chr11_-_102365111_102365280	0.172359	Zkscan3	ENSMUST00000006749.9|Slc4a1|ENSMUSG00000006574.9|solute carrier family 4 (anion exchanger), member 1
mm10_v2_chr1_-_40790642_40790686	0.164674	Zkscan3	ENSMUST00000039672.5|Mfsd9|ENSMUSG00000041945.6|major facilitator superfamily domain containing 9
mm10_v2_chr8_-_106893515_106893545	0.153653	Zkscan3	ENSMUST00000176090.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8
mm10_v2_chr7_-_81345189_81345254	0.141168	Zkscan3	ENSMUST00000080813.4|Rps17|ENSMUSG00000061787.8|ribosomal protein S17
mm10_v2_chr8_-_106893581_106893609	0.139072	Zkscan3	ENSMUST00000176437.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000177068.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000169312.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000176515.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8
mm10_v2_chr1_+_180942452_180942477	0.138848	Zkscan3	ENSMUST00000027800.8|Tmem63a|ENSMUSG00000026519.10|transmembrane protein 63a
mm10_v2_chr2_+_31670714_31670741	0.134784	Zkscan3	ENSMUST00000038474.7|Exosc2|ENSMUSG00000039356.9|exosome component 2 	ENSMUST00000137156.1|Exosc2|ENSMUSG00000039356.9|exosome component 2
mm10_v2_chr8_-_124897685_124897757	0.130948	Zkscan3	ENSMUST00000098312.2|Exoc8|ENSMUSG00000074030.2|exocyst complex component 8
mm10_v2_chr7_+_101896340_101896431	0.122458	Zkscan3	ENSMUST00000035395.7|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000106973.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000144207.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr2_+_156613664_156613706	0.12162	Zkscan3	ENSMUST00000169464.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000109567.3|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr17_-_35673517_35673700	0.121327	Zkscan3	ENSMUST00000162266.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000160734.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000159852.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4 	ENSMUST00000160039.1|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chr2_+_121295437_121295486	0.113742	Zkscan3	ENSMUST00000110639.1|Map1a|ENSMUSG00000027254.7|microtubule-associated protein 1 A
mm10_v2_chr6_+_125552948_125552980	0.111924	Zkscan3	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr17_-_35673738_35673750	0.104797	Zkscan3	ENSMUST00000001565.8|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chr13_+_42709482_42709581	0.100805	Zkscan3	ENSMUST00000066928.5|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1 	ENSMUST00000148891.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr2_+_32646586_32646602	0.0818358	Zkscan3	ENSMUST00000009705.7|Eng|ENSMUSG00000026814.10|endoglin 	ENSMUST00000167841.1|Eng|ENSMUSG00000026814.10|endoglin
mm10_v2_chr9_+_114688782_114688813	0.080202	Zkscan3	ENSMUST00000047404.6|Dync1li1|ENSMUSG00000032435.8|dynein cytoplasmic 1 light intermediate chain 1
mm10_v2_chr2_+_104095796_104095805	0.0776669	Zkscan3	ENSMUST00000040423.5|Cd59a|ENSMUSG00000032679.6|CD59a antigen 	ENSMUST00000168176.1|Cd59a|ENSMUSG00000032679.6|CD59a antigen
mm10_v2_chr9_+_108648720_108648840	0.0774245	Zkscan3	ENSMUST00000098384.2|Gm10621|ENSMUSG00000074075.2|predicted gene 10621
mm10_v2_chr5_+_117976761_117976803	0.0771536	Zkscan3	ENSMUST00000035579.6|Fbxo21|ENSMUSG00000032898.6|F-box protein 21
mm10_v2_chr19_+_6276725_6276792	0.0751334	Zkscan3	ENSMUST00000025684.3|Ehd1|ENSMUSG00000024772.9|EH-domain containing 1
mm10_v2_chr4_+_63544747_63544772	0.0647453	Zkscan3	ENSMUST00000035301.6|Atp6v1g1|ENSMUSG00000039105.6|ATPase, H+ transporting, lysosomal V1 subunit G1
mm10_v2_chr3_-_95687846_95687917	0.0640256	Zkscan3	ENSMUST00000015994.3|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000148854.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000117782.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4
mm10_v2_chr3_+_146500071_146500109	0.0628817	Zkscan3	ENSMUST00000119130.1|Gng5|ENSMUSG00000068523.6|guanine nucleotide binding protein (G protein), gamma 5
mm10_v2_chr17_+_46110982_46111022	0.061416	Zkscan3	ENSMUST00000024763.3|Mrps18a|ENSMUSG00000023967.3|mitochondrial ribosomal protein S18A 	ENSMUST00000123646.1|Mrps18a|ENSMUSG00000023967.3|mitochondrial ribosomal protein S18A
mm10_v2_chr18_-_34651703_34651741	0.0610058	Zkscan3	ENSMUST00000025228.5|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23 	ENSMUST00000133181.1|Cdc23|ENSMUSG00000024370.10|CDC23 cell division cycle 23
mm10_v2_chr7_-_98178254_98178274	0.054502	Zkscan3	ENSMUST00000040971.7|Capn5|ENSMUSG00000035547.8|calpain 5
mm10_v2_chr13_+_73467197_73467316	0.0503596	Zkscan3	ENSMUST00000022099.8|Lpcat1|ENSMUSG00000021608.8|lysophosphatidylcholine acyltransferase 1
mm10_v2_chr6_+_127453667_127453685	0.0461622	Zkscan3	ENSMUST00000112193.1|Parp11|ENSMUSG00000037997.6|poly (ADP-ribose) polymerase family, member 11
mm10_v2_chr6_+_127453705_127453723	0.0421165	Zkscan3	ENSMUST00000039680.5|Parp11|ENSMUSG00000037997.6|poly (ADP-ribose) polymerase family, member 11
mm10_v2_chr3_+_146499850_146499890	0.0384856	Zkscan3	ENSMUST00000118280.1|Gng5|ENSMUSG00000068523.6|guanine nucleotide binding protein (G protein), gamma 5
mm10_v2_chr7_-_27228605_27228636	0.0384064	Zkscan3	ENSMUST00000003850.7|Itpkc|ENSMUSG00000003752.8|inositol 1,4,5-trisphosphate 3-kinase C
mm10_v2_chr11_-_88851462_88851522	0.0373396	Zkscan3	ENSMUST00000107903.1|Akap1|ENSMUSG00000018428.9|A kinase (PRKA) anchor protein 1
mm10_v2_chr14_+_51893610_51893677	0.0367011	Zkscan3	ENSMUST00000047726.5|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2 	ENSMUST00000161888.1|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2
mm10_v2_chr15_-_3979432_3979573	0.0353031	Zkscan3	ENSMUST00000022791.8|Fbxo4|ENSMUSG00000022184.8|F-box protein 4
mm10_v2_chr19_-_10869757_10869940	0.032914	Zkscan3	ENSMUST00000120524.1|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A 	ENSMUST00000025645.7|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A
mm10_v2_chr14_+_57424054_57424093	0.029675	Zkscan3	ENSMUST00000122063.1|Ift88|ENSMUSG00000040040.10|intraflagellar transport 88
mm10_v2_chr8_+_71396853_71396891	0.0272355	Zkscan3	ENSMUST00000002473.8|Babam1|ENSMUSG00000031820.8|BRISC and BRCA1 A complex member 1
mm10_v2_chrX_-_75874536_75874590	0.025101	Zkscan3	ENSMUST00000033547.7|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr1_+_58795371_58795447	0.022765	Zkscan3	ENSMUST00000027189.8|Casp8|ENSMUSG00000026029.8|caspase 8
mm10_v2_chr2_+_155775333_155775392	0.0209133	Zkscan3	ENSMUST00000029141.5|Mmp24|ENSMUSG00000027612.7|matrix metallopeptidase 24
mm10_v2_chr7_+_126759601_126759651	0.0163831	Zkscan3	ENSMUST00000050201.4|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3 	ENSMUST00000057669.9|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3
mm10_v2_chr7_-_127020321_127020336	0.0138267	Zkscan3	ENSMUST00000032918.2|Pagr1a|ENSMUSG00000030680.3|PAXIP1 associated glutamate rich protein 1A
mm10_v2_chr5_-_73338580_73338640	0.0137873	Zkscan3	ENSMUST00000087195.5|Ociad2|ENSMUSG00000029153.8|OCIA domain containing 2
mm10_v2_chr1_-_39651165_39651196	0.0123116	Zkscan3	ENSMUST00000053355.4|Creg2|ENSMUSG00000050967.4|cellular repressor of E1A-stimulated genes 2
mm10_v2_chr12_+_76533540_76533597	0.00148181	Zkscan3	ENSMUST00000075249.4|Plekhg3|ENSMUSG00000052609.8|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
