Motif ID: Vsx2_Dlx3

Z-value: 1.129

Transcription factors associated with Vsx2_Dlx3:

Gene SymbolEntrez IDGene Name
Dlx3 ENSMUSG00000001510.7 Dlx3
Vsx2 ENSMUSG00000021239.6 Vsx2

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Vsx2mm10_v2_chr12_+_84569762_845698400.076.8e-01Click!


Activity profile for motif Vsx2_Dlx3.

activity profile for motif Vsx2_Dlx3


Sorted Z-values histogram for motif Vsx2_Dlx3

Sorted Z-values for motif Vsx2_Dlx3



Network of associatons between targets according to the STRING database.



First level regulatory network of Vsx2_Dlx3

PNG image of the network

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Top targets:


Showing 1 to 20 of 118 entries
PromoterScoreRefseqGene SymbolGene Name
chr5_+_139543889 49.212 ENSMUST00000174792.1
ENSMUST00000031523.8
 Uncx

UNC homeobox

chr6_-_23248264 29.701 ENSMUST00000031709.5
 Fezf1
Fez family zinc finger 1
chr10_+_73821857 8.782 ENSMUST00000177128.1
ENSMUST00000064562.7
ENSMUST00000129404.2
ENSMUST00000105426.3
ENSMUST00000131321.2
ENSMUST00000126920.2
ENSMUST00000147189.2
ENSMUST00000105424.3
ENSMUST00000092420.6
ENSMUST00000105429.3
ENSMUST00000131724.2
ENSMUST00000152655.2
ENSMUST00000151116.2
ENSMUST00000155701.2
ENSMUST00000152819.2
ENSMUST00000125517.2
ENSMUST00000124046.1
ENSMUST00000149977.2
ENSMUST00000146682.1
ENSMUST00000177107.1
 Pcdh15



















protocadherin 15



















chr12_+_38780284 8.332 ENSMUST00000162563.1
ENSMUST00000161164.1
ENSMUST00000160996.1
 Etv1


ets variant gene 1


chr12_+_38780817 8.005 ENSMUST00000160856.1
 Etv1
ets variant gene 1
chr2_-_168767136 7.876 ENSMUST00000029061.5
ENSMUST00000103074.1
 Sall4

sal-like 4 (Drosophila)

chr4_+_8690399 6.262 ENSMUST00000127476.1
 Chd7
chromodomain helicase DNA binding protein 7
chr7_-_49636847 6.086 ENSMUST00000032717.6
 Dbx1
developing brain homeobox 1
chr3_+_55782500 5.964 ENSMUST00000075422.4
 Mab21l1
mab-21-like 1 (C. elegans)
chr17_-_70853482 4.624 ENSMUST00000118283.1
 Tgif1
TGFB-induced factor homeobox 1
chr10_-_6980376 4.553 ENSMUST00000105617.1
 Ipcef1
interaction protein for cytohesin exchange factors 1
chr4_+_62583568 4.473 ENSMUST00000098031.3
 Rgs3
regulator of G-protein signaling 3
chr9_-_79977782 4.300 ENSMUST00000093811.4
 Filip1
filamin A interacting protein 1
chr17_+_43952999 4.261 ENSMUST00000177857.1
 Rcan2
regulator of calcineurin 2
chr3_-_116253467 4.035 ENSMUST00000090473.5
 Gpr88
G-protein coupled receptor 88
chrX_-_60893430 4.012 ENSMUST00000135107.2
 Sox3
SRY-box containing gene 3
chr2_-_168767029 3.965 ENSMUST00000075044.3
 Sall4
sal-like 4 (Drosophila)
chr12_+_38781093 3.847 ENSMUST00000161513.1
 Etv1
ets variant gene 1
chr7_-_116031047 3.763 ENSMUST00000106612.1
 Sox6
SRY-box containing gene 6
chr8_-_61902669 3.473 ENSMUST00000121785.1
ENSMUST00000034057.7
 Palld

palladin, cytoskeletal associated protein


Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Showing 1 to 20 of 56 entries
Log-likelihood per target Total log-likelihoodTermDescription
6.2 49.2 GO:0035726 common myeloid progenitor cell proliferation(GO:0035726)
5.1 30.7 GO:0021797 forebrain anterior/posterior pattern specification(GO:0021797)
1.8 20.2 GO:0048934 peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935)
0.7 11.8 GO:0001833 inner cell mass cell proliferation(GO:0001833)
1.1 8.8 GO:0050957 equilibrioception(GO:0050957)
0.6 7.0 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
2.1 6.3 GO:0003221 right ventricular cardiac muscle tissue morphogenesis(GO:0003221)
0.3 6.1 GO:0021521 ventral spinal cord interneuron specification(GO:0021521) cell fate specification involved in pattern specification(GO:0060573)
0.3 5.4 GO:0048387 negative regulation of retinoic acid receptor signaling pathway(GO:0048387)
0.0 4.2 GO:0043488 regulation of mRNA stability(GO:0043488)
1.0 4.0 GO:0061743 motor learning(GO:0061743)
0.2 4.0 GO:0007530 sex determination(GO:0007530)
0.2 3.5 GO:0071803 keratinocyte development(GO:0003334) positive regulation of podosome assembly(GO:0071803)
0.2 3.4 GO:0031987 locomotion involved in locomotory behavior(GO:0031987)
1.1 3.3 GO:0061357 Wnt protein secretion(GO:0061355) regulation of Wnt protein secretion(GO:0061356) positive regulation of Wnt protein secretion(GO:0061357)
0.1 2.9 GO:0050873 brown fat cell differentiation(GO:0050873)
0.1 2.7 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.8 2.4 GO:0090526 regulation of gluconeogenesis involved in cellular glucose homeostasis(GO:0090526)
0.8 2.4 GO:0060489 orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490)
0.6 2.3 GO:0046552 eye photoreceptor cell fate commitment(GO:0042706) photoreceptor cell fate commitment(GO:0046552)

Gene overrepresentation in cellular_component category:

Showing 1 to 20 of 29 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.0 121.3 GO:0005634 nucleus(GO:0005634)
0.1 11.8 GO:0000792 heterochromatin(GO:0000792)
0.2 8.8 GO:0032420 stereocilium(GO:0032420)
0.0 7.3 GO:0005667 transcription factor complex(GO:0005667)
0.1 3.5 GO:0002102 podosome(GO:0002102)
0.2 3.3 GO:0042788 polysomal ribosome(GO:0042788)
0.1 3.3 GO:0032590 dendrite membrane(GO:0032590)
0.4 2.6 GO:0000444 MIS12/MIND type complex(GO:0000444)
0.6 2.4 GO:0060187 cell pole(GO:0060187)
0.3 2.4 GO:1990316 ATG1/ULK1 kinase complex(GO:1990316)
0.1 1.8 GO:0035861 site of double-strand break(GO:0035861)
0.1 1.6 GO:0033276 transcription factor TFTC complex(GO:0033276)
0.1 1.5 GO:0005751 mitochondrial respiratory chain complex IV(GO:0005751)
0.1 1.5 GO:0031045 dense core granule(GO:0031045)
0.0 1.4 GO:0016459 myosin complex(GO:0016459)
0.1 1.3 GO:0005640 nuclear outer membrane(GO:0005640)
0.2 1.2 GO:0061689 paranodal junction(GO:0033010) tricellular tight junction(GO:0061689)
0.2 1.0 GO:0001674 female germ cell nucleus(GO:0001674)
0.1 0.9 GO:0035068 micro-ribonucleoprotein complex(GO:0035068)
0.1 0.9 GO:0044292 dendrite terminus(GO:0044292)

Gene overrepresentation in molecular_function category:

Showing 1 to 20 of 44 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 89.5 GO:0043565 sequence-specific DNA binding(GO:0043565)
0.2 31.8 GO:0001078 transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078)
0.1 8.8 GO:0047485 protein N-terminus binding(GO:0047485)
0.2 6.3 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 6.0 GO:0016779 nucleotidyltransferase activity(GO:0016779)
0.0 6.0 GO:0003774 motor activity(GO:0003774)
0.2 4.6 GO:0070410 co-SMAD binding(GO:0070410)
0.1 4.0 GO:0001106 RNA polymerase II transcription corepressor activity(GO:0001106)
0.6 3.4 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.3 3.3 GO:0031852 mu-type opioid receptor binding(GO:0031852)
0.1 3.3 GO:0017091 AU-rich element binding(GO:0017091)
0.0 3.0 GO:0051015 actin filament binding(GO:0051015)
0.2 2.7 GO:0004653 polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653)
0.2 2.6 GO:0043522 leucine zipper domain binding(GO:0043522)
0.4 2.4 GO:0070728 leucine binding(GO:0070728)
0.2 2.0 GO:0070700 BMP receptor binding(GO:0070700)
0.0 2.0 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144) carbohydrate transporter activity(GO:1901476)
0.2 1.9 GO:0051428 peptide hormone receptor binding(GO:0051428)
0.3 1.8 GO:0061649 ubiquitinated histone binding(GO:0061649)
0.2 1.6 GO:0017162 aryl hydrocarbon receptor binding(GO:0017162)

Gene overrepresentation in C2:CP category:

Showing 1 to 11 of 11 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.5 20.2 PID_P38_MK2_PATHWAY p38 signaling mediated by MAPKAP kinases
0.1 9.8 PID_BETA_CATENIN_NUC_PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.1 6.3 PID_WNT_NONCANONICAL_PATHWAY Noncanonical Wnt signaling pathway
0.1 4.6 SA_PTEN_PATHWAY PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate.
0.1 4.6 PID_EPHRINB_REV_PATHWAY Ephrin B reverse signaling
0.1 4.6 PID_AR_PATHWAY Coregulation of Androgen receptor activity
0.1 3.4 PID_TCR_CALCIUM_PATHWAY Calcium signaling in the CD4+ TCR pathway
0.1 1.9 PID_HEDGEHOG_2PATHWAY Signaling events mediated by the Hedgehog family
0.1 1.6 PID_PDGFRA_PATHWAY PDGFR-alpha signaling pathway
0.0 1.4 PID_NETRIN_PATHWAY Netrin-mediated signaling events
0.0 0.6 PID_HNF3B_PATHWAY FOXA2 and FOXA3 transcription factor networks

Gene overrepresentation in C2:CP:REACTOME category:

Showing 1 to 13 of 13 entries
Log-likelihood per target Total log-likelihoodTermDescription
0.1 4.6 REACTOME_DOWNREGULATION_OF_SMAD2_3_SMAD4_TRANSCRIPTIONAL_ACTIVITY Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity
0.1 3.4 REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS Genes involved in Adherens junctions interactions
0.1 2.7 REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS Genes involved in O-linked glycosylation of mucins
0.0 2.6 REACTOME_MITOTIC_PROMETAPHASE Genes involved in Mitotic Prometaphase
0.0 1.9 REACTOME_CLASS_B_2_SECRETIN_FAMILY_RECEPTORS Genes involved in Class B/2 (Secretin family receptors)
0.1 1.8 REACTOME_REGULATION_OF_GENE_EXPRESSION_IN_BETA_CELLS Genes involved in Regulation of gene expression in beta cells
0.1 1.7 REACTOME_CITRIC_ACID_CYCLE_TCA_CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.0 1.6 REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.0 1.4 REACTOME_NETRIN1_SIGNALING Genes involved in Netrin-1 signaling
0.0 0.9 REACTOME_REGULATORY_RNA_PATHWAYS Genes involved in Regulatory RNA pathways
0.0 0.8 REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES Genes involved in Generation of second messenger molecules
0.1 0.7 REACTOME_ACTIVATION_OF_CHAPERONE_GENES_BY_ATF6_ALPHA Genes involved in Activation of Chaperone Genes by ATF6-alpha
0.0 0.1 REACTOME_NEF_MEDIATED_DOWNREGULATION_OF_MHC_CLASS_I_COMPLEX_CELL_SURFACE_EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression