mm10_v2_chr16_+_91269759_91269778	8.46254	Foxa3	ENSMUST00000056882.5|Olig1|ENSMUSG00000046160.5|oligodendrocyte transcription factor 1
mm10_v2_chr15_+_3270767_3271006	5.85948	Foxa3	ENSMUST00000082424.4|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159158.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159216.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000160311.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1
mm10_v2_chr7_-_103813913_103813996	4.85392	Foxa3	ENSMUST00000098192.3|Hbb-bt|ENSMUSG00000073940.3|hemoglobin, beta adult t chain
mm10_v2_chr8_-_84773381_84773427	4.73029	Foxa3	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr2_-_77519565_77519647	4.34797	Foxa3	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr9_+_53850243_53850257	3.99767	Foxa3	ENSMUST00000048485.5|Sln|ENSMUSG00000042045.5|sarcolipin
mm10_v2_chr7_-_103827922_103828096	3.72639	Foxa3	ENSMUST00000023934.6|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain 	ENSMUST00000153218.1|Hbb-bs|ENSMUSG00000052305.5|hemoglobin, beta adult s chain
mm10_v2_chr1_+_51289106_51289142	3.28706	Foxa3	ENSMUST00000051572.6|Sdpr|ENSMUSG00000045954.6|serum deprivation response
mm10_v2_chr13_+_94173992_94174027	3.09466	Foxa3	ENSMUST00000121618.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr14_-_101609033_101609191	2.73421	Foxa3	ENSMUST00000161991.1|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4 	ENSMUST00000100340.3|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4
mm10_v2_chr7_-_27181149_27181162	2.67796	Foxa3	ENSMUST00000071986.6|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity 	ENSMUST00000121848.1|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity
mm10_v2_chr11_+_78499087_78499123	2.66519	Foxa3	ENSMUST00000017488.4|Vtn|ENSMUSG00000017344.4|vitronectin
mm10_v2_chr16_+_41532851_41532865	2.60054	Foxa3	ENSMUST00000078873.4|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr10_+_60106452_60106468	2.53756	Foxa3	ENSMUST00000165024.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr3_-_87263518_87263599	2.41528	Foxa3	ENSMUST00000090986.4|Fcrls|ENSMUSG00000015852.7|Fc receptor-like S, scavenger receptor
mm10_v2_chr1_+_165763746_165763784	2.13827	Foxa3	ENSMUST00000111432.3|Creg1|ENSMUSG00000040713.6|cellular repressor of E1A-stimulated genes 1
mm10_v2_chr9_-_112187898_112187938	2.1295	Foxa3	ENSMUST00000178410.1|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000172380.3|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr15_-_54919961_54920037	2.08374	Foxa3	ENSMUST00000167541.2|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000041591.9|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENSMUST00000173516.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr6_-_86765807_86765834	1.93562	Foxa3	ENSMUST00000123732.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr9_-_103222063_103222149	1.75078	Foxa3	ENSMUST00000170904.1|Trf|ENSMUSG00000032554.9|transferrin
mm10_v2_chr6_-_86765866_86765921	1.74896	Foxa3	ENSMUST00000113675.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr11_-_26210553_26210585	1.68924	Foxa3	ENSMUST00000101447.3|5730522E02Rik|ENSMUSG00000073101.3|RIKEN cDNA 5730522E02 gene
mm10_v2_chr17_+_70522083_70522145	1.65961	Foxa3	ENSMUST00000148486.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1 	ENSMUST00000133717.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr3_-_87263703_87263738	1.64602	Foxa3	ENSMUST00000146512.1|Fcrls|ENSMUSG00000015852.7|Fc receptor-like S, scavenger receptor
mm10_v2_chr15_-_54920115_54920146	1.63323	Foxa3	ENSMUST00000171545.1|Enpp2|ENSMUSG00000022425.9|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm10_v2_chr10_-_128744014_128744085	1.46323	Foxa3	ENSMUST00000026414.7|Dgka|ENSMUSG00000025357.7|diacylglycerol kinase, alpha
mm10_v2_chr1_+_17145357_17145431	1.4376	Foxa3	ENSMUST00000026879.7|Gdap1|ENSMUSG00000025777.7|ganglioside-induced differentiation-associated-protein 1
mm10_v2_chr13_+_16011851_16011949	1.35427	Foxa3	ENSMUST00000042603.6|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr3_+_33799791_33799955	1.33185	Foxa3	ENSMUST00000099153.3|Ttc14|ENSMUSG00000027677.11|tetratricopeptide repeat domain 14
mm10_v2_chr8_+_106603351_106603379	1.31444	Foxa3	ENSMUST00000000312.5|Cdh1|ENSMUSG00000000303.6|cadherin 1 	ENSMUST00000167688.1|Cdh1|ENSMUSG00000000303.6|cadherin 1
mm10_v2_chr4_-_116405986_116406120	1.27375	Foxa3	ENSMUST00000123072.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2 	ENSMUST00000144281.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2
mm10_v2_chr2_-_170194033_170194064	1.26667	Foxa3	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr10_+_21992216_21992234	1.26607	Foxa3	ENSMUST00000150089.1|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1 	ENSMUST00000100036.3|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr2_+_140395309_140395438	1.2653	Foxa3	ENSMUST00000110067.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110064.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110063.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110062.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000078027.5|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000043836.7|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2
mm10_v2_chr18_+_67133713_67133826	1.26459	Foxa3	ENSMUST00000076605.7|Gnal|ENSMUSG00000024524.10|guanine nucleotide binding protein, alpha stimulating, olfactory type
mm10_v2_chr3_-_144202300_144202345	1.24751	Foxa3	ENSMUST00000121796.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4 	ENSMUST00000121112.1|Lmo4|ENSMUSG00000028266.11|LIM domain only 4
mm10_v2_chr4_+_94739276_94739300	1.24418	Foxa3	ENSMUST00000073939.6|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase 	ENSMUST00000102798.1|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase
mm10_v2_chr17_+_70522149_70522169	1.2322	Foxa3	ENSMUST00000140728.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr16_-_43664145_43664184	1.18781	Foxa3	ENSMUST00000096065.4|Tigit|ENSMUSG00000071552.4|T cell immunoreceptor with Ig and ITIM domains
mm10_v2_chrX_+_142228177_142228250	1.18585	Foxa3	ENSMUST00000112914.1|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr16_+_33518278_33518340	1.18397	Foxa3	ENSMUST00000122427.1|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8 	ENSMUST00000059056.8|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8
mm10_v2_chr2_-_84425258_84425411	1.17796	Foxa3	ENSMUST00000074262.2|Calcrl|ENSMUSG00000059588.7|calcitonin receptor-like
mm10_v2_chrX_+_71663665_71663671	1.13596	Foxa3	ENSMUST00000070449.5|Gpr50|ENSMUSG00000056380.7|G-protein-coupled receptor 50
mm10_v2_chr15_-_42676967_42676978	1.12397	Foxa3	ENSMUST00000022921.5|Angpt1|ENSMUSG00000022309.8|angiopoietin 1
mm10_v2_chr11_-_69805617_69805673	1.11329	Foxa3	ENSMUST00000051025.4|Tmem102|ENSMUSG00000089876.3|transmembrane protein 102
mm10_v2_chr9_-_112187766_112187862	1.10292	Foxa3	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chrX_+_142227923_142227951	1.10121	Foxa3	ENSMUST00000042329.5|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr12_-_84450944_84451018	1.07891	Foxa3	ENSMUST00000085192.5|Aldh6a1|ENSMUSG00000021238.10|aldehyde dehydrogenase family 6, subfamily A1
mm10_v2_chr4_-_87806296_87806325	1.07402	Foxa3	ENSMUST00000126353.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENSMUST00000149357.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr3_-_146781351_146781431	1.00442	Foxa3	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr11_-_116024489_116024511	0.928057	Foxa3	ENSMUST00000016703.7|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr3_+_136670076_136670186	0.92319	Foxa3	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr13_-_83729544_83729584	0.921535	Foxa3	ENSMUST00000181705.1|Gm26803|ENSMUSG00000097265.1|predicted gene, 26803
mm10_v2_chr4_+_148602527_148602583	0.917291	Foxa3	ENSMUST00000105701.2|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2 	ENSMUST00000052060.6|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2
mm10_v2_chr4_+_114680769_114680804	0.883458	Foxa3	ENSMUST00000146346.1|Gm12829|ENSMUSG00000085870.1|predicted gene 12829
mm10_v2_chr19_+_44992127_44992136	0.843606	Foxa3	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr1_+_9848375_9848398	0.842793	Foxa3	ENSMUST00000097826.4|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3
mm10_v2_chr10_-_128919259_128919305	0.805584	Foxa3	ENSMUST00000149961.1|Rdh5|ENSMUSG00000025350.9|retinol dehydrogenase 5 	ENSMUST00000026406.7|Rdh5|ENSMUSG00000025350.9|retinol dehydrogenase 5
mm10_v2_chr4_+_101717404_101717462	0.778059	Foxa3	ENSMUST00000102777.3|Lepr|ENSMUSG00000057722.11|leptin receptor 	ENSMUST00000106921.2|Lepr|ENSMUSG00000057722.11|leptin receptor 	ENSMUST00000037552.3|Lepr|ENSMUSG00000057722.11|leptin receptor 	ENSMUST00000145024.1|Lepr|ENSMUSG00000057722.11|leptin receptor
mm10_v2_chr8_-_46124146_46124146	0.766681	Foxa3	ENSMUST00000170416.1|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr3_+_68584154_68584181	0.765039	Foxa3	ENSMUST00000182997.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr2_-_175131864_175131864	0.733181	Foxa3	ENSMUST00000108929.2|Gm14399|ENSMUSG00000090093.2|predicted gene 14399
mm10_v2_chr11_-_69662625_69662642	0.731763	Foxa3	ENSMUST00000018905.5|Mpdu1|ENSMUSG00000018761.8|mannose-P-dolichol utilization defect 1
mm10_v2_chr4_-_87806276_87806294	0.714158	Foxa3	ENSMUST00000148059.1|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr2_+_4718145_4718205	0.680845	Foxa3	ENSMUST00000056914.6|Bend7|ENSMUSG00000048186.8|BEN domain containing 7
mm10_v2_chr3_+_95624971_95625021	0.652365	Foxa3	ENSMUST00000058230.6|Ensa|ENSMUSG00000038619.6|endosulfine alpha 	ENSMUST00000037983.4|Ensa|ENSMUSG00000038619.6|endosulfine alpha
mm10_v2_chr1_-_45503282_45503282	0.638701	Foxa3	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr11_-_54860564_54860608	0.632703	Foxa3	ENSMUST00000144164.1|Lyrm7|ENSMUSG00000020268.7|LYR motif containing 7
mm10_v2_chr8_+_93810832_93810843	0.613911	Foxa3	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr5_-_103211251_103211334	0.608668	Foxa3	ENSMUST00000060871.5|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112846.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000170792.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112847.2|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr19_+_26623419_26623471	0.593937	Foxa3	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr4_-_55532453_55532485	0.575652	Foxa3	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chr15_-_99820072_99820154	0.574859	Foxa3	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chr2_+_153161303_153161339	0.569167	Foxa3	ENSMUST00000089027.2|Tm9sf4|ENSMUSG00000068040.4|transmembrane 9 superfamily protein member 4
mm10_v2_chr11_-_69662564_69662596	0.558519	Foxa3	ENSMUST00000129224.1|Mpdu1|ENSMUSG00000018761.8|mannose-P-dolichol utilization defect 1 	ENSMUST00000155200.1|Mpdu1|ENSMUSG00000018761.8|mannose-P-dolichol utilization defect 1
mm10_v2_chr17_-_79896028_79896123	0.556571	Foxa3	ENSMUST00000068282.5|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2 	ENSMUST00000112437.1|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2
mm10_v2_chr18_+_36952621_36952766	0.55292	Foxa3	ENSMUST00000115661.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr2_+_69723071_69723093	0.552216	Foxa3	ENSMUST00000040915.8|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr4_+_45965327_45965342	0.547537	Foxa3	ENSMUST00000107777.2|Tdrd7|ENSMUSG00000035517.11|tudor domain containing 7
mm10_v2_chr16_-_4880284_4880315	0.546689	Foxa3	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr1_-_180245757_180245911	0.540909	Foxa3	ENSMUST00000111104.1|Psen2|ENSMUSG00000010609.9|presenilin 2
mm10_v2_chr3_+_106113229_106113390	0.539121	Foxa3	ENSMUST00000079132.5|Chia|ENSMUSG00000062778.6|chitinase, acidic 	ENSMUST00000139086.1|Chia|ENSMUSG00000062778.6|chitinase, acidic
mm10_v2_chr2_+_69722797_69722840	0.534578	Foxa3	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr9_+_109931458_109931488	0.51983	Foxa3	ENSMUST00000072772.5|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4 	ENSMUST00000035055.8|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4
mm10_v2_chr6_-_137571007_137571032	0.51626	Foxa3	ENSMUST00000100841.2|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr5_-_124187150_124187225	0.512992	Foxa3	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr8_+_69300776_69300776	0.490332	Foxa3	ENSMUST00000078257.6|D130040H23Rik|ENSMUSG00000079038.2|RIKEN cDNA D130040H23 gene
mm10_v2_chr10_-_93310963_93310989	0.472604	Foxa3	ENSMUST00000151153.1|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr10_-_57532416_57532487	0.472407	Foxa3	ENSMUST00000169122.1|Serinc1|ENSMUSG00000019877.4|serine incorporator 1
mm10_v2_chr19_-_37207293_37207508	0.468655	Foxa3	ENSMUST00000132580.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000079754.4|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000136286.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126188.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126781.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr2_+_164833841_164833858	0.464665	Foxa3	ENSMUST00000152721.1|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chr13_+_49582745_49582778	0.459154	Foxa3	ENSMUST00000065494.7|Omd|ENSMUSG00000048368.8|osteomodulin
mm10_v2_chr11_-_95041335_95041374	0.453542	Foxa3	ENSMUST00000038431.7|Pdk2|ENSMUSG00000038967.7|pyruvate dehydrogenase kinase, isoenzyme 2
mm10_v2_chr1_+_75142775_75142797	0.449504	Foxa3	ENSMUST00000097694.4|Fam134a|ENSMUSG00000049339.10|family with sequence similarity 134, member A
mm10_v2_chr2_-_7395879_7395912	0.440807	Foxa3	ENSMUST00000182404.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr10_-_57532489_57532530	0.429141	Foxa3	ENSMUST00000020027.4|Serinc1|ENSMUSG00000019877.4|serine incorporator 1
mm10_v2_chr2_-_90479165_90479178	0.428895	Foxa3	ENSMUST00000111495.2|Ptprj|ENSMUSG00000025314.10|protein tyrosine phosphatase, receptor type, J
mm10_v2_chr17_+_45433823_45433868	0.407925	Foxa3	ENSMUST00000181149.1|B230354K17Rik|ENSMUSG00000097119.1|RIKEN cDNA B230354K17 gene
mm10_v2_chr1_+_171329015_171329145	0.404042	Foxa3	ENSMUST00000111300.1|Dedd|ENSMUSG00000013973.6|death effector domain-containing
mm10_v2_chr18_+_37742088_37742137	0.397719	Foxa3	ENSMUST00000003599.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr8_+_11556061_11556099	0.396456	Foxa3	ENSMUST00000054399.4|Ing1|ENSMUSG00000045969.7|inhibitor of growth family, member 1
mm10_v2_chr19_-_20727533_20727568	0.381496	Foxa3	ENSMUST00000025656.3|Aldh1a7|ENSMUSG00000024747.3|aldehyde dehydrogenase family 1, subfamily A7
mm10_v2_chr13_-_96542479_96542523	0.374669	Foxa3	ENSMUST00000022172.4|Polk|ENSMUSG00000021668.8|polymerase (DNA directed), kappa
mm10_v2_chr10_+_97565436_97565546	0.358022	Foxa3	ENSMUST00000038160.4|Lum|ENSMUSG00000036446.4|lumican
mm10_v2_chr15_+_9071252_9071273	0.345492	Foxa3	ENSMUST00000100789.4|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial 	ENSMUST00000100790.3|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial 	ENSMUST00000067760.4|Nadk2|ENSMUSG00000022253.8|NAD kinase 2, mitochondrial
mm10_v2_chr4_+_42916647_42916712	0.341615	Foxa3	ENSMUST00000132173.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178 	ENSMUST00000107975.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr19_+_55253369_55253369	0.321372	Foxa3	ENSMUST00000043150.4|Acsl5|ENSMUSG00000024981.5|acyl-CoA synthetase long-chain family member 5
mm10_v2_chr13_+_40859768_40859822	0.321081	Foxa3	ENSMUST00000110191.2|Gcnt2|ENSMUSG00000021360.9|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm10_v2_chr11_-_42000532_42000592	0.310282	Foxa3	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr19_-_8713862_8713897	0.303223	Foxa3	ENSMUST00000010239.4|Slc3a2|ENSMUSG00000010095.7|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm10_v2_chr7_+_130692532_130692575	0.295957	Foxa3	ENSMUST00000033141.6|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr2_-_176917518_176917518	0.288229	Foxa3	ENSMUST00000108931.2|Gm14296|ENSMUSG00000074527.5|predicted gene 14296
mm10_v2_chr1_-_168431695_168431750	0.28202	Foxa3	ENSMUST00000176790.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chrX_+_56786527_56786564	0.275314	Foxa3	ENSMUST00000144600.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr8_-_25785154_25785215	0.265088	Foxa3	ENSMUST00000038498.8|Bag4|ENSMUSG00000037316.8|BCL2-associated athanogene 4
mm10_v2_chr13_+_96388294_96388338	0.253848	Foxa3	ENSMUST00000099295.4|Poc5|ENSMUSG00000021671.8|POC5 centriolar protein homolog (Chlamydomonas)
mm10_v2_chr3_+_121531603_121531634	0.240957	Foxa3	ENSMUST00000180804.1|A530020G20Rik|ENSMUSG00000097124.1|RIKEN cDNA A530020G20 gene
mm10_v2_chr11_-_42000284_42000356	0.234232	Foxa3	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr9_-_44802951_44802961	0.234229	Foxa3	ENSMUST00000044694.6|Ttc36|ENSMUSG00000039438.6|tetratricopeptide repeat domain 36
mm10_v2_chr7_+_19228334_19228416	0.22875	Foxa3	ENSMUST00000063976.8|Opa3|ENSMUSG00000052214.8|optic atrophy 3
mm10_v2_chr11_-_42000834_42000867	0.22414	Foxa3	ENSMUST00000070725.4|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr3_+_138277489_138277495	0.224081	Foxa3	ENSMUST00000004232.9|Adh1|ENSMUSG00000074207.4|alcohol dehydrogenase 1 (class I)
mm10_v2_chr11_-_76027726_76027802	0.205035	Foxa3	ENSMUST00000021207.6|Fam101b|ENSMUSG00000020846.6|family with sequence similarity 101, member B
mm10_v2_chr7_-_65371210_65371287	0.203733	Foxa3	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr2_+_68117713_68117713	0.202926	Foxa3	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr4_+_42922253_42922268	0.190795	Foxa3	ENSMUST00000139100.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr2_+_91730127_91730225	0.190081	Foxa3	ENSMUST00000099712.3|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111317.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000111316.2|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1 	ENSMUST00000045705.7|Ambra1|ENSMUSG00000040506.10|autophagy/beclin 1 regulator 1
mm10_v2_chr4_+_126262325_126262380	0.188346	Foxa3	ENSMUST00000030660.8|Trappc3|ENSMUSG00000028847.8|trafficking protein particle complex 3
mm10_v2_chr7_+_30565410_30565432	0.186393	Foxa3	ENSMUST00000043850.7|Igflr1|ENSMUSG00000036826.8|IGF-like family receptor 1
mm10_v2_chr4_-_25281752_25281800	0.173657	Foxa3	ENSMUST00000038705.7|Ufl1|ENSMUSG00000040359.8|UFM1 specific ligase 1
mm10_v2_chrX_+_109095359_109095391	0.171372	Foxa3	ENSMUST00000033598.8|Sh3bgrl|ENSMUSG00000031246.8|SH3-binding domain glutamic acid-rich protein like
mm10_v2_chr9_-_101198999_101199080	0.163562	Foxa3	ENSMUST00000066773.7|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr6_+_8520008_8520058	0.160528	Foxa3	ENSMUST00000162567.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1 	ENSMUST00000161217.1|Glcci1|ENSMUSG00000029638.11|glucocorticoid induced transcript 1
mm10_v2_chr11_-_69197809_69197843	0.156831	Foxa3	ENSMUST00000094078.3|Alox8|ENSMUSG00000020891.5|arachidonate 8-lipoxygenase 	ENSMUST00000021262.3|Alox8|ENSMUSG00000020891.5|arachidonate 8-lipoxygenase
mm10_v2_chr17_+_47505149_47505164	0.156215	Foxa3	ENSMUST00000183177.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3 	ENSMUST00000182848.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3
mm10_v2_chr9_+_32116040_32116136	0.155235	Foxa3	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr1_-_132367879_132367894	0.154744	Foxa3	ENSMUST00000142609.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr18_+_52465676_52465710	0.151006	Foxa3	ENSMUST00000025406.7|Srfbp1|ENSMUSG00000024528.7|serum response factor binding protein 1
mm10_v2_chr11_+_43151599_43151599	0.141529	Foxa3	ENSMUST00000077659.5|Atp10b|ENSMUSG00000055415.7|ATPase, class V, type 10B
mm10_v2_chr7_+_30751471_30751562	0.137304	Foxa3	ENSMUST00000182229.1|Sbsn|ENSMUSG00000046056.8|suprabasin 	ENSMUST00000182227.1|Sbsn|ENSMUSG00000046056.8|suprabasin 	ENSMUST00000080518.6|Sbsn|ENSMUSG00000046056.8|suprabasin 	ENSMUST00000182721.1|Sbsn|ENSMUSG00000046056.8|suprabasin
mm10_v2_chr1_-_132390301_132390373	0.136171	Foxa3	ENSMUST00000132435.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr7_-_4844665_4844699	0.135896	Foxa3	ENSMUST00000066041.5|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis) 	ENSMUST00000172377.1|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis)
mm10_v2_chr17_+_47505117_47505132	0.13129	Foxa3	ENSMUST00000183044.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3 	ENSMUST00000037333.10|Ccnd3|ENSMUSG00000034165.10|cyclin D3
mm10_v2_chr13_+_23531044_23531088	0.129615	Foxa3	ENSMUST00000102972.3|Hist1h4h|ENSMUSG00000060981.5|histone cluster 1, H4h
mm10_v2_chr18_-_38918642_38918771	0.129551	Foxa3	ENSMUST00000040647.4|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr1_-_170867761_170867784	0.126372	Foxa3	ENSMUST00000027974.6|Atf6|ENSMUSG00000026663.6|activating transcription factor 6
mm10_v2_chr17_-_45433682_45433709	0.125001	Foxa3	ENSMUST00000024727.8|Cdc5l|ENSMUSG00000023932.8|cell division cycle 5-like (S. pombe)
mm10_v2_chr14_-_5455467_5455467	0.101335	Foxa3	ENSMUST00000180867.1|Gm3194|ENSMUSG00000094825.2|predicted gene 3194
mm10_v2_chr4_+_102430047_102430079	0.0931145	Foxa3	ENSMUST00000172616.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr10_+_96616998_96617015	0.0785303	Foxa3	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr18_-_62756275_62756347	0.0785125	Foxa3	ENSMUST00000067450.1|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene 	ENSMUST00000048109.5|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene
mm10_v2_chr12_-_31950210_31950246	0.07303	Foxa3	ENSMUST00000176084.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000176103.1|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1 	ENSMUST00000167458.2|Hbp1|ENSMUSG00000002996.11|high mobility group box transcription factor 1
mm10_v2_chr17_+_47505043_47505066	0.0690977	Foxa3	ENSMUST00000182129.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3 	ENSMUST00000171031.1|Ccnd3|ENSMUSG00000034165.10|cyclin D3
mm10_v2_chr2_+_164833781_164833815	0.059503	Foxa3	ENSMUST00000143780.1|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chr1_-_64121389_64121452	0.0585163	Foxa3	ENSMUST00000055001.3|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr12_-_56536895_56536937	0.0574346	Foxa3	ENSMUST00000001536.8|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr10_-_81230773_81230833	0.0541192	Foxa3	ENSMUST00000047408.4|Atcay|ENSMUSG00000034958.5|ataxia, cerebellar, Cayman type homolog (human)
mm10_v2_chr10_-_93311073_93311161	0.0420876	Foxa3	ENSMUST00000008542.5|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr2_+_25180737_25180764	0.0405444	Foxa3	ENSMUST00000104999.2|Nrarp|ENSMUSG00000078202.2|Notch-regulated ankyrin repeat protein
mm10_v2_chr12_-_87200200_87200284	0.03514	Foxa3	ENSMUST00000037418.5|Tmed8|ENSMUSG00000034111.5|transmembrane emp24 domain containing 8
mm10_v2_chr6_-_23132981_23132992	0.0338467	Foxa3	ENSMUST00000031707.7|Aass|ENSMUSG00000029695.7|aminoadipate-semialdehyde synthase
mm10_v2_chr1_+_15712303_15712303	0.0304116	Foxa3	ENSMUST00000170146.1|Kcnb2|ENSMUSG00000090498.1|potassium voltage gated channel, Shab-related subfamily, member 2
mm10_v2_chr11_+_78465697_78465735	0.0167983	Foxa3	ENSMUST00000001126.3|Slc46a1|ENSMUSG00000020829.9|solute carrier family 46, member 1
mm10_v2_chr1_-_75142360_75142424	0.0112987	Foxa3	ENSMUST00000041213.5|Cnppd1|ENSMUSG00000033159.8|cyclin Pas1/PHO80 domain containing 1
mm10_v2_chr9_+_32224246_32224264	0.0102918	Foxa3	ENSMUST00000168954.2|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr13_-_74807913_74807989	0.00809992	Foxa3	ENSMUST00000065629.4|Cast|ENSMUSG00000021585.8|calpastatin
mm10_v2_chr16_+_49699198_49699304	0.00340902	Foxa3	ENSMUST00000046777.4|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57 	ENSMUST00000142682.1|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57
