mm10_v2_chr6_-_23248264_23248390	16.4281	Hmga1	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr15_-_56694525_56694554	4.49456	Hmga1	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr12_-_108003594_108003613	3.40325	Hmga1	ENSMUST00000066060.4|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr16_-_26989974_26989974	3.10519	Hmga1	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chr13_+_5861489_5861501	2.86991	Hmga1	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr8_-_87959560_87959595	2.56245	Hmga1	ENSMUST00000109655.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr19_-_19001099_19001119	2.48723	Hmga1	ENSMUST00000040153.8|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta 	ENSMUST00000112828.1|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta
mm10_v2_chr1_+_107511416_107511431	2.47148	Hmga1	ENSMUST00000009356.4|Serpinb2|ENSMUSG00000062345.4|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm10_v2_chr3_+_134236483_134236500	2.46201	Hmga1	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr4_-_36056726_36056726	2.29436	Hmga1	ENSMUST00000108124.3|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr10_+_88091070_88091076	2.26263	Hmga1	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr1_-_158814469_158814469	2.13212	Hmga1	ENSMUST00000161589.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr4_-_97584605_97584610	2.05948	Hmga1	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr17_+_43953191_43953276	1.95965	Hmga1	ENSMUST00000044792.4|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr18_-_62741387_62741387	1.94561	Hmga1	ENSMUST00000097557.3|Spink13|ENSMUSG00000073551.3|serine peptidase inhibitor, Kazal type 13
mm10_v2_chr9_-_100506844_100506856	1.81682	Hmga1	ENSMUST00000112874.3|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr3_+_67892189_67892226	1.79591	Hmga1	ENSMUST00000063263.3|Iqcj|ENSMUSG00000051777.4|IQ motif containing J
mm10_v2_chr3_-_120886691_120886746	1.78378	Hmga1	ENSMUST00000182099.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene 	ENSMUST00000183168.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene 	ENSMUST00000183276.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene 	ENSMUST00000182124.1|6530403H02Rik|ENSMUSG00000098097.1|RIKEN cDNA 6530403H02 gene
mm10_v2_chr1_-_126830632_126830778	1.78016	Hmga1	ENSMUST00000112583.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5 	ENSMUST00000094609.3|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr19_-_24861828_24861855	1.76768	Hmga1	ENSMUST00000047666.4|Pgm5|ENSMUSG00000041731.7|phosphoglucomutase 5
mm10_v2_chr6_-_102464667_102464667	1.73673	Hmga1	ENSMUST00000032159.6|Cntn3|ENSMUSG00000030075.8|contactin 3
mm10_v2_chr3_+_102010138_102010171	1.71267	Hmga1	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr14_+_74640840_74640887	1.69407	Hmga1	ENSMUST00000036653.3|Htr2a|ENSMUSG00000034997.4|5-hydroxytryptamine (serotonin) receptor 2A
mm10_v2_chr2_-_140671440_140671458	1.67187	Hmga1	ENSMUST00000099301.1|Flrt3|ENSMUSG00000079021.1|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr1_-_52490736_52490736	1.64035	Hmga1	ENSMUST00000170269.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr5_-_5266038_5266292	1.59899	Hmga1	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr13_+_83573577_83573607	1.59318	Hmga1	ENSMUST00000185052.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr2_-_140671462_140671476	1.57161	Hmga1	ENSMUST00000110057.2|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr4_-_97584612_97584643	1.54483	Hmga1	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr15_-_103215285_103215366	1.50849	Hmga1	ENSMUST00000122182.1|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000108813.3|Cbx5|ENSMUSG00000009575.8|chromobox 5 	ENSMUST00000127191.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr6_-_59024340_59024450	1.50691	Hmga1	ENSMUST00000173193.1|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr2_+_125866107_125866282	1.46772	Hmga1	ENSMUST00000134337.1|Galk2|ENSMUSG00000027207.9|galactokinase 2 	ENSMUST00000094604.2|Galk2|ENSMUSG00000027207.9|galactokinase 2 	ENSMUST00000134798.1|Galk2|ENSMUSG00000027207.9|galactokinase 2
mm10_v2_chr2_-_140671400_140671427	1.45945	Hmga1	ENSMUST00000056760.3|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr12_+_72441933_72441970	1.45415	Hmga1	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr10_-_92165159_92165177	1.42518	Hmga1	ENSMUST00000182567.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000181604.2|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000181213.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr10_-_33624587_33624769	1.39507	Hmga1	ENSMUST00000160299.1|Clvs2|ENSMUSG00000019785.7|clavesin 2 	ENSMUST00000019920.6|Clvs2|ENSMUSG00000019785.7|clavesin 2
mm10_v2_chr8_+_45658666_45658728	1.3915	Hmga1	ENSMUST00000134675.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000139869.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000126067.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr6_+_142414012_142414012	1.38027	Hmga1	ENSMUST00000141548.1|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr7_-_143460989_143461050	1.3703	Hmga1	ENSMUST00000167912.1|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57) 	ENSMUST00000037287.6|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57)
mm10_v2_chr8_+_45658731_45658804	1.33874	Hmga1	ENSMUST00000143820.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000132139.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr5_-_66514815_66514837	1.33573	Hmga1	ENSMUST00000161879.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159357.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr6_-_59024470_59024549	1.32419	Hmga1	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr12_+_52699297_52699411	1.31824	Hmga1	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr6_-_99435345_99435368	1.29824	Hmga1	ENSMUST00000113322.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000176850.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000176632.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr1_-_52499980_52499980	1.28316	Hmga1	ENSMUST00000164747.1|Nab1|ENSMUSG00000002881.8|Ngfi-A binding protein 1
mm10_v2_chr17_+_43952999_43953063	1.25473	Hmga1	ENSMUST00000177857.1|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr4_+_101507947_101508032	1.24856	Hmga1	ENSMUST00000149047.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENSMUST00000106929.3|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr10_+_96136603_96136603	1.21722	Hmga1	ENSMUST00000074615.6|Gm5426|ENSMUSG00000096486.1|predicted pseudogene 5426
mm10_v2_chr6_+_88724828_88724924	1.19047	Hmga1	ENSMUST00000089449.2|Mgll|ENSMUSG00000033174.11|monoglyceride lipase
mm10_v2_chr5_-_123666682_123666695	1.18157	Hmga1	ENSMUST00000149410.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chr17_+_85620816_85620843	1.17606	Hmga1	ENSMUST00000175898.2|Six3|ENSMUSG00000038805.9|sine oculis-related homeobox 3
mm10_v2_chr19_+_24875679_24875689	1.1668	Hmga1	ENSMUST00000073080.5|Gm10053|ENSMUSG00000058927.5|predicted gene 10053
mm10_v2_chr6_+_142413833_142413833	1.15894	Hmga1	ENSMUST00000126521.2|B230216G23Rik|ENSMUSG00000071112.5|RIKEN cDNA B230216G23 gene
mm10_v2_chr6_-_25690729_25690729	1.15009	Hmga1	ENSMUST00000054867.6|Gpr37|ENSMUSG00000039904.8|G protein-coupled receptor 37
mm10_v2_chr1_+_109993982_109993982	1.13983	Hmga1	ENSMUST00000027542.6|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr5_+_8046077_8046078	1.11602	Hmga1	ENSMUST00000088786.4|Sri|ENSMUSG00000003161.9|sorcin
mm10_v2_chr6_-_99028874_99028942	1.11021	Hmga1	ENSMUST00000154163.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chrX_-_43274786_43274786	1.10603	Hmga1	ENSMUST00000016294.7|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr12_+_72441852_72441866	1.10456	Hmga1	ENSMUST00000162159.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr10_+_123264076_123264125	1.09788	Hmga1	ENSMUST00000050756.7|Fam19a2|ENSMUSG00000044071.7|family with sequence similarity 19, member A2
mm10_v2_chr15_+_61987034_61987059	1.09361	Hmga1	ENSMUST00000159338.1|Myc|ENSMUSG00000022346.8|myelocytomatosis oncogene
mm10_v2_chrX_-_165004829_165004829	1.04357	Hmga1	ENSMUST00000114890.2|Gm17604|ENSMUSG00000079600.2|predicted gene, 17604
mm10_v2_chr5_-_51567717_51567732	1.04043	Hmga1	ENSMUST00000127135.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha 	ENSMUST00000151104.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr8_+_45658273_45658298	1.03762	Hmga1	ENSMUST00000153798.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr2_-_86347764_86347764	0.991124	Hmga1	ENSMUST00000099894.2|Olfr1055|ENSMUSG00000075189.2|olfactory receptor 1055
mm10_v2_chr10_+_37139558_37139558	0.988196	Hmga1	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr15_-_101054399_101054399	0.981564	Hmga1	ENSMUST00000178140.1|Fignl2|ENSMUSG00000095440.1|fidgetin-like 2
mm10_v2_chr1_-_89933290_89933290	0.955639	Hmga1	ENSMUST00000036954.7|Gbx2|ENSMUSG00000034486.7|gastrulation brain homeobox 2
mm10_v2_chr6_-_99044414_99044459	0.945735	Hmga1	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr6_-_30693676_30693749	0.936261	Hmga1	ENSMUST00000169422.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115131.1|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000115130.2|Cep41|ENSMUSG00000029790.10|centrosomal protein 41 	ENSMUST00000031810.8|Cep41|ENSMUSG00000029790.10|centrosomal protein 41
mm10_v2_chr4_+_21727726_21727790	0.919848	Hmga1	ENSMUST00000102997.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000120679.1|Ccnc|ENSMUSG00000028252.14|cyclin C 	ENSMUST00000108240.2|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr10_+_102158858_102158889	0.906912	Hmga1	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr14_-_46788267_46788411	0.875365	Hmga1	ENSMUST00000015903.4|Cnih1|ENSMUSG00000015759.4|cornichon homolog 1 (Drosophila)
mm10_v2_chr1_+_66364623_66364663	0.849889	Hmga1	ENSMUST00000077355.5|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114012.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr8_+_36993551_36993611	0.809094	Hmga1	ENSMUST00000098825.3|AI429214|ENSMUSG00000074384.3|expressed sequence AI429214
mm10_v2_chr15_+_44196135_44196233	0.805365	Hmga1	ENSMUST00000038856.6|Trhr|ENSMUSG00000038760.7|thyrotropin releasing hormone receptor 	ENSMUST00000110289.3|Trhr|ENSMUSG00000038760.7|thyrotropin releasing hormone receptor
mm10_v2_chr2_-_79908389_79908403	0.795424	Hmga1	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr3_+_124321031_124321113	0.786065	Hmga1	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr9_+_57521232_57521314	0.768615	Hmga1	ENSMUST00000000090.6|Cox5a|ENSMUSG00000000088.6|cytochrome c oxidase subunit Va
mm10_v2_chr6_+_13871517_13871569	0.757022	Hmga1	ENSMUST00000181090.1|1110019D14Rik|ENSMUSG00000097616.1|RIKEN cDNA 1110019D14 gene 	ENSMUST00000181225.1|1110019D14Rik|ENSMUSG00000097616.1|RIKEN cDNA 1110019D14 gene
mm10_v2_chr19_-_57197435_57197460	0.747817	Hmga1	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr7_+_46847128_46847150	0.746998	Hmga1	ENSMUST00000005051.4|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr2_-_72986716_72986716	0.745896	Hmga1	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr7_-_28302238_28302238	0.744454	Hmga1	ENSMUST00000108315.3|Dll3|ENSMUSG00000003436.11|delta-like 3 (Drosophila)
mm10_v2_chr11_+_108682602_108682639	0.707823	Hmga1	ENSMUST00000106718.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106715.1|Cep112|ENSMUSG00000020728.11|centrosomal protein 112 	ENSMUST00000106724.3|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chr19_-_57197377_57197417	0.695062	Hmga1	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chrX_+_155262443_155262481	0.692428	Hmga1	ENSMUST00000026324.9|Acot9|ENSMUSG00000025287.9|acyl-CoA thioesterase 9
mm10_v2_chrX_-_17571563_17571641	0.691609	Hmga1	ENSMUST00000177213.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr12_-_10900296_10900318	0.679038	Hmga1	ENSMUST00000085735.2|Pgk1-rs7|ENSMUSG00000066632.2|phosphoglycerate kinase-1, related sequence-7
mm10_v2_chr11_-_120348513_120348559	0.673094	Hmga1	ENSMUST00000071555.6|Actg1|ENSMUSG00000062825.9|actin, gamma, cytoplasmic 1
mm10_v2_chr5_+_33018816_33018865	0.670782	Hmga1	ENSMUST00000019109.7|Ywhah|ENSMUSG00000018965.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm10_v2_chr10_-_35711891_35711891	0.664136	Hmga1	ENSMUST00000080898.2|Amd2|ENSMUSG00000063953.2|S-adenosylmethionine decarboxylase 2
mm10_v2_chr3_-_121171678_121171717	0.655105	Hmga1	ENSMUST00000170781.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000039761.5|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106467.1|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000106466.3|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3 	ENSMUST00000164925.2|Rwdd3|ENSMUSG00000028133.11|RWD domain containing 3
mm10_v2_chr19_-_57197496_57197536	0.65135	Hmga1	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr7_+_113765998_113766039	0.645091	Hmga1	ENSMUST00000046687.9|Spon1|ENSMUSG00000038156.9|spondin 1, (f-spondin) extracellular matrix protein
mm10_v2_chr4_+_109676568_109676590	0.644899	Hmga1	ENSMUST00000102724.4|Faf1|ENSMUSG00000010517.7|Fas-associated factor 1
mm10_v2_chr11_-_120348475_120348508	0.643447	Hmga1	ENSMUST00000062147.7|Actg1|ENSMUSG00000062825.9|actin, gamma, cytoplasmic 1 	ENSMUST00000128055.1|Actg1|ENSMUSG00000062825.9|actin, gamma, cytoplasmic 1
mm10_v2_chr3_-_88577208_88577208	0.642839	Hmga1	ENSMUST00000098952.2|Gm10704|ENSMUSG00000074479.2|predicted pseudogene 10704
mm10_v2_chr15_-_36598019_36598124	0.636693	Hmga1	ENSMUST00000155116.1|Pabpc1|ENSMUSG00000022283.8|poly(A) binding protein, cytoplasmic 1
mm10_v2_chr7_-_126704736_126704762	0.636422	Hmga1	ENSMUST00000131415.1|Coro1a|ENSMUSG00000030707.9|coronin, actin binding protein 1A
mm10_v2_chr2_-_51149100_51149115	0.631409	Hmga1	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr10_+_4611971_4612021	0.630481	Hmga1	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr2_+_71981184_71981287	0.628374	Hmga1	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr8_-_36732897_36733054	0.62404	Hmga1	ENSMUST00000098826.3|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr19_-_37178011_37178048	0.623521	Hmga1	ENSMUST00000133988.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr11_-_42000284_42000356	0.61866	Hmga1	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chrX_+_159303266_159303281	0.595927	Hmga1	ENSMUST00000112491.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr19_+_23723279_23723279	0.595519	Hmga1	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr7_-_60005101_60005151	0.590842	Hmga1	ENSMUST00000059305.10|Snrpn|ENSMUSG00000000948.10|small nuclear ribonucleoprotein N
mm10_v2_chr12_+_55089202_55089202	0.589595	Hmga1	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr9_-_101251810_101251839	0.587704	Hmga1	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr8_-_111854278_111854356	0.584024	Hmga1	ENSMUST00000034432.5|Cfdp1|ENSMUSG00000031954.5|craniofacial development protein 1
mm10_v2_chr15_+_92597104_92597121	0.577263	Hmga1	ENSMUST00000035399.8|Pdzrn4|ENSMUSG00000036218.9|PDZ domain containing RING finger 4
mm10_v2_chrX_-_136741155_136741352	0.571988	Hmga1	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr10_-_34207551_34207551	0.567287	Hmga1	ENSMUST00000048010.7|Dse|ENSMUSG00000039497.7|dermatan sulfate epimerase
mm10_v2_chr9_+_75071579_75071600	0.553986	Hmga1	ENSMUST00000136731.1|Myo5a|ENSMUSG00000034593.10|myosin VA
mm10_v2_chr12_-_81421910_81421946	0.548414	Hmga1	ENSMUST00000085319.3|Adam4|ENSMUSG00000072972.3|a disintegrin and metallopeptidase domain 4
mm10_v2_chr11_-_82829024_82829043	0.533342	Hmga1	ENSMUST00000021036.6|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000074515.4|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000103218.2|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr3_-_104864420_104864505	0.530912	Hmga1	ENSMUST00000094028.5|Capza1|ENSMUSG00000070372.7|capping protein (actin filament) muscle Z-line, alpha 1
mm10_v2_chr4_+_105157339_105157354	0.52664	Hmga1	ENSMUST00000064139.7|Ppap2b|ENSMUSG00000028517.8|phosphatidic acid phosphatase type 2B
mm10_v2_chr14_-_26534870_26534931	0.522106	Hmga1	ENSMUST00000139075.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein 	ENSMUST00000102956.1|Slmap|ENSMUSG00000021870.11|sarcolemma associated protein
mm10_v2_chr1_-_162898665_162898728	0.521547	Hmga1	ENSMUST00000111510.1|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2 	ENSMUST00000045902.6|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2
mm10_v2_chr5_+_124579134_124579184	0.518846	Hmga1	ENSMUST00000031333.3|Gtf2h3|ENSMUSG00000029387.4|general transcription factor IIH, polypeptide 3
mm10_v2_chr2_+_130277157_130277315	0.51501	Hmga1	ENSMUST00000028890.8|Nop56|ENSMUSG00000027405.10|NOP56 ribonucleoprotein 	ENSMUST00000159373.1|Nop56|ENSMUSG00000027405.10|NOP56 ribonucleoprotein
mm10_v2_chr4_-_40279389_40279434	0.512647	Hmga1	ENSMUST00000108108.2|Ndufb6|ENSMUSG00000071014.4|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 	ENSMUST00000095128.3|Ndufb6|ENSMUSG00000071014.4|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6
mm10_v2_chr8_-_36613937_36613948	0.506158	Hmga1	ENSMUST00000033923.7|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr8_+_93810832_93810843	0.50431	Hmga1	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr6_-_99632376_99632376	0.500534	Hmga1	ENSMUST00000176255.1|Gm20696|ENSMUSG00000030068.3|predicted gene 20696
mm10_v2_chr13_-_41273977_41273977	0.499997	Hmga1	ENSMUST00000163881.1|Gm17364|ENSMUSG00000090853.1|predicted gene, 17364
mm10_v2_chr7_-_113347273_113347293	0.4993	Hmga1	ENSMUST00000117577.1|Btbd10|ENSMUSG00000038187.8|BTB (POZ) domain containing 10
mm10_v2_chr14_+_113314602_113314608	0.496558	Hmga1	ENSMUST00000072359.6|Tpm3-rs7|ENSMUSG00000058126.6|tropomyosin 3, related sequence 7
mm10_v2_chr9_-_70421533_70421592	0.496135	Hmga1	ENSMUST00000034742.6|Ccnb2|ENSMUSG00000032218.6|cyclin B2
mm10_v2_chr7_-_126704816_126704854	0.491977	Hmga1	ENSMUST00000032949.7|Coro1a|ENSMUSG00000030707.9|coronin, actin binding protein 1A
mm10_v2_chrX_-_163761323_163761344	0.48809	Hmga1	ENSMUST00000059320.2|Rnf138rt1|ENSMUSG00000083695.5|ring finger protein 138, retrogene 1
mm10_v2_chr6_-_13839916_13839942	0.48704	Hmga1	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr10_+_53596936_53597004	0.47063	Hmga1	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chr5_+_121777929_121777929	0.464043	Hmga1	ENSMUST00000160821.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr9_+_113812547_113812621	0.463526	Hmga1	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr2_-_21205342_21205371	0.460078	Hmga1	ENSMUST00000027992.2|Enkur|ENSMUSG00000026679.3|enkurin, TRPC channel interacting protein
mm10_v2_chr11_-_107189325_107189381	0.449681	Hmga1	ENSMUST00000018577.7|Nol11|ENSMUSG00000018433.8|nucleolar protein 11 	ENSMUST00000106757.1|Nol11|ENSMUSG00000018433.8|nucleolar protein 11
mm10_v2_chr6_-_13871459_13871471	0.445299	Hmga1	ENSMUST00000155856.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chrX_-_17572241_17572325	0.440557	Hmga1	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr4_-_123750236_123750345	0.438549	Hmga1	ENSMUST00000102636.3|Akirin1|ENSMUSG00000023075.9|akirin 1
mm10_v2_chr2_-_69206146_69206194	0.438275	Hmga1	ENSMUST00000127243.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000149643.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000167875.2|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000005365.8|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr5_-_88527841_88527891	0.432188	Hmga1	ENSMUST00000087033.3|Igj|ENSMUSG00000067149.3|immunoglobulin joining chain
mm10_v2_chr12_+_100110148_100110193	0.432012	Hmga1	ENSMUST00000021595.8|Psmc1|ENSMUSG00000021178.8|protease (prosome, macropain) 26S subunit, ATPase 1
mm10_v2_chr12_-_41485751_41485751	0.431308	Hmga1	ENSMUST00000043884.4|Lrrn3|ENSMUSG00000036295.4|leucine rich repeat protein 3, neuronal
mm10_v2_chr16_-_59632520_59632541	0.428581	Hmga1	ENSMUST00000118438.1|Arl6|ENSMUSG00000022722.12|ADP-ribosylation factor-like 6
mm10_v2_chr12_-_65073927_65073954	0.427351	Hmga1	ENSMUST00000021332.8|Fkbp3|ENSMUSG00000020949.8|FK506 binding protein 3
mm10_v2_chr11_-_98625661_98625661	0.419635	Hmga1	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr3_+_97901190_97901250	0.419157	Hmga1	ENSMUST00000029476.2|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) 	ENSMUST00000122288.1|Sec22b|ENSMUSG00000027879.3|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
mm10_v2_chr18_+_35770318_35770318	0.414412	Hmga1	ENSMUST00000165299.1|Gm16490|ENSMUSG00000091842.1|predicted gene 16490
mm10_v2_chr10_+_11609256_11609269	0.410433	Hmga1	ENSMUST00000052902.7|Gm9797|ENSMUSG00000045455.7|predicted pseudogene 9797
mm10_v2_chr4_+_105789869_105789869	0.408873	Hmga1	ENSMUST00000184254.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr2_-_164389095_164389095	0.400349	Hmga1	ENSMUST00000167427.1|Slpi|ENSMUSG00000017002.8|secretory leukocyte peptidase inhibitor
mm10_v2_chr11_-_42000532_42000592	0.395677	Hmga1	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr1_-_150465563_150465604	0.394185	Hmga1	ENSMUST00000164600.1|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000111902.2|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000111901.2|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000006171.9|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
mm10_v2_chr5_+_130187158_130187166	0.39398	Hmga1	ENSMUST00000119027.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000026390.7|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr2_-_36136773_36136845	0.388744	Hmga1	ENSMUST00000028251.3|Rbm18|ENSMUSG00000026889.6|RNA binding motif protein 18
mm10_v2_chr6_+_135065651_135065682	0.387587	Hmga1	ENSMUST00000050104.7|Gprc5a|ENSMUSG00000046733.7|G protein-coupled receptor, family C, group 5, member A
mm10_v2_chr8_+_34115030_34115030	0.387173	Hmga1	ENSMUST00000095345.3|Mboat4|ENSMUSG00000071113.3|membrane bound O-acyltransferase domain containing 4
mm10_v2_chr15_+_31276491_31276491	0.387005	Hmga1	ENSMUST00000068987.5|Fam136b-ps|ENSMUSG00000055416.5|family with sequence similarity 136, member B, pseudogene
mm10_v2_chr19_-_38224096_38224183	0.385429	Hmga1	ENSMUST00000067167.5|Fra10ac1|ENSMUSG00000054237.5|FRA10AC1 homolog (human)
mm10_v2_chr10_+_97565436_97565546	0.384991	Hmga1	ENSMUST00000038160.4|Lum|ENSMUSG00000036446.4|lumican
mm10_v2_chr11_+_120232921_120232952	0.371779	Hmga1	ENSMUST00000122148.1|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1 	ENSMUST00000044985.7|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1
mm10_v2_chr1_+_152954966_152955101	0.368359	Hmga1	ENSMUST00000043313.8|Nmnat2|ENSMUSG00000042751.8|nicotinamide nucleotide adenylyltransferase 2
mm10_v2_chr9_-_101198999_101199080	0.367716	Hmga1	ENSMUST00000066773.7|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr1_-_44019929_44020006	0.364709	Hmga1	ENSMUST00000061421.3|Mettl21c|ENSMUSG00000047343.4|methyltransferase like 21C
mm10_v2_chr9_+_32116040_32116136	0.362747	Hmga1	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr4_+_123282778_123282911	0.360498	Hmga1	ENSMUST00000106243.1|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4 	ENSMUST00000106241.1|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4 	ENSMUST00000080178.6|Pabpc4|ENSMUSG00000011257.13|poly(A) binding protein, cytoplasmic 4
mm10_v2_chrX_-_103483205_103483225	0.358846	Hmga1	ENSMUST00000127786.2|Xist|ENSMUSG00000086503.2|inactive X specific transcripts
mm10_v2_chr1_+_17145357_17145431	0.357311	Hmga1	ENSMUST00000026879.7|Gdap1|ENSMUSG00000025777.7|ganglioside-induced differentiation-associated-protein 1
mm10_v2_chr18_+_11633276_11633357	0.346846	Hmga1	ENSMUST00000115861.2|Rbbp8|ENSMUSG00000041238.9|retinoblastoma binding protein 8
mm10_v2_chr8_+_46986913_46986962	0.346202	Hmga1	ENSMUST00000039840.7|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6 	ENSMUST00000119686.1|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm10_v2_chr16_+_58670208_58670246	0.345084	Hmga1	ENSMUST00000060077.5|Cpox|ENSMUSG00000022742.5|coproporphyrinogen oxidase
mm10_v2_chr5_+_14514918_14514951	0.343468	Hmga1	ENSMUST00000030691.10|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein) 	ENSMUST00000182407.1|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein)
mm10_v2_chr1_-_155417283_155417323	0.341771	Hmga1	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr7_+_7171330_7171373	0.334987	Hmga1	ENSMUST00000051435.7|Zfp418|ENSMUSG00000034538.7|zinc finger protein 418
mm10_v2_chr2_-_69206133_69206144	0.332671	Hmga1	ENSMUST00000112320.1|Spc25|ENSMUSG00000005233.10|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr8_-_54718664_54718689	0.328505	Hmga1	ENSMUST00000144711.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17 	ENSMUST00000093510.2|Wdr17|ENSMUSG00000039375.10|WD repeat domain 17
mm10_v2_chr1_+_4808237_4808287	0.327619	Hmga1	ENSMUST00000131119.1|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1
mm10_v2_chr3_+_136670076_136670186	0.326527	Hmga1	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr14_-_52104015_52104028	0.321469	Hmga1	ENSMUST00000111610.4|Hnrnpc|ENSMUSG00000060373.8|heterogeneous nuclear ribonucleoprotein C 	ENSMUST00000164655.1|Hnrnpc|ENSMUSG00000060373.8|heterogeneous nuclear ribonucleoprotein C
mm10_v2_chr6_-_13871477_13871518	0.319385	Hmga1	ENSMUST00000139231.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chr19_-_12765447_12765632	0.318817	Hmga1	ENSMUST00000112933.1|Cntf|ENSMUSG00000079415.2|ciliary neurotrophic factor
mm10_v2_chr9_+_80066939_80066983	0.297352	Hmga1	ENSMUST00000164859.1|Senp6|ENSMUSG00000034252.8|SUMO/sentrin specific peptidase 6
mm10_v2_chr18_+_32067729_32067811	0.297304	Hmga1	ENSMUST00000025243.3|Iws1|ENSMUSG00000024384.3|IWS1 homolog (S. cerevisiae)
mm10_v2_chr15_+_41447438_41447482	0.294317	Hmga1	ENSMUST00000110297.2|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000090096.4|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr19_+_26623419_26623471	0.293764	Hmga1	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr2_+_20737306_20737321	0.290364	Hmga1	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chrX_-_23285532_23285578	0.286496	Hmga1	ENSMUST00000115319.2|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr3_+_76593550_76593550	0.28162	Hmga1	ENSMUST00000162471.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr6_-_29165003_29165008	0.266925	Hmga1	ENSMUST00000007993.9|Rbm28|ENSMUSG00000029701.9|RNA binding motif protein 28
mm10_v2_chr5_-_103100054_103100088	0.248445	Hmga1	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr1_+_19208914_19208967	0.246551	Hmga1	ENSMUST00000027059.4|Tfap2b|ENSMUSG00000025927.7|transcription factor AP-2 beta
mm10_v2_chr12_+_59131473_59131502	0.243521	Hmga1	ENSMUST00000177162.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr12_+_110485710_110485755	0.241458	Hmga1	ENSMUST00000084985.3|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform 	ENSMUST00000109832.1|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm10_v2_chr15_+_82345954_82346035	0.240617	Hmga1	ENSMUST00000023086.8|Smdt1|ENSMUSG00000022452.8|single-pass membrane protein with aspartate rich tail 1
mm10_v2_chr1_-_155417394_155417435	0.238908	Hmga1	ENSMUST00000111775.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1 	ENSMUST00000111774.1|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr9_+_80066895_80066936	0.238417	Hmga1	ENSMUST00000037484.8|Senp6|ENSMUSG00000034252.8|SUMO/sentrin specific peptidase 6 	ENSMUST00000176640.1|Senp6|ENSMUSG00000034252.8|SUMO/sentrin specific peptidase 6
mm10_v2_chr19_-_33392255_33392300	0.236826	Hmga1	ENSMUST00000096114.5|Rnls|ENSMUSG00000071573.7|renalase, FAD-dependent amine oxidase 	ENSMUST00000163093.1|Rnls|ENSMUSG00000071573.7|renalase, FAD-dependent amine oxidase
mm10_v2_chr19_-_12796108_12796146	0.231475	Hmga1	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr10_+_63243785_63243846	0.229633	Hmga1	ENSMUST00000020258.8|Herc4|ENSMUSG00000020064.8|hect domain and RLD 4
mm10_v2_chr2_-_73660401_73660410	0.22761	Hmga1	ENSMUST00000102677.4|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr15_-_100424092_100424173	0.22717	Hmga1	ENSMUST00000154676.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr1_-_171150588_171150609	0.218488	Hmga1	ENSMUST00000155798.1|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein 	ENSMUST00000081560.4|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein 	ENSMUST00000111336.3|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein
mm10_v2_chr6_+_17636983_17637014	0.217	Hmga1	ENSMUST00000015877.7|Capza2|ENSMUSG00000015733.7|capping protein (actin filament) muscle Z-line, alpha 2
mm10_v2_chr11_-_28339867_28339867	0.216258	Hmga1	ENSMUST00000042595.6|Gm6685|ENSMUSG00000032889.6|predicted pseudogene 6685
mm10_v2_chr6_+_125192154_125192170	0.21597	Hmga1	ENSMUST00000032485.5|Mrpl51|ENSMUSG00000030335.5|mitochondrial ribosomal protein L51
mm10_v2_chr3_+_106034661_106034692	0.215111	Hmga1	ENSMUST00000170669.2|Gm4540|ENSMUSG00000092072.2|predicted gene 4540
mm10_v2_chr15_+_79030874_79030933	0.212594	Hmga1	ENSMUST00000171999.1|Gcat|ENSMUSG00000006378.7|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase) 	ENSMUST00000006544.7|Gcat|ENSMUSG00000006378.7|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
mm10_v2_chr14_+_105681824_105681831	0.209516	Hmga1	ENSMUST00000073238.6|Gm10076|ENSMUSG00000060143.6|predicted gene 10076
mm10_v2_chr2_+_163017354_163017513	0.207082	Hmga1	ENSMUST00000018002.6|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52 	ENSMUST00000150396.1|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52
mm10_v2_chr18_-_43059418_43059471	0.202353	Hmga1	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chrY_+_13252442_13252442	0.200158	Hmga1	ENSMUST00000178599.1|Gm21440|ENSMUSG00000093903.1|predicted gene, 21440
mm10_v2_chr18_+_36952621_36952766	0.199257	Hmga1	ENSMUST00000115661.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr6_-_136875794_136875811	0.19676	Hmga1	ENSMUST00000032342.1|Mgp|ENSMUSG00000030218.1|matrix Gla protein
mm10_v2_chr13_+_21495218_21495260	0.194955	Hmga1	ENSMUST00000104942.1|AK157302|ENSMUSG00000078139.3|cDNA sequence AK157302
mm10_v2_chr9_-_78489141_78489166	0.19155	Hmga1	ENSMUST00000154207.1|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr12_+_98771018_98771041	0.191203	Hmga1	ENSMUST00000021399.7|Zc3h14|ENSMUSG00000021012.9|zinc finger CCCH type containing 14
mm10_v2_chr9_+_65890237_65890343	0.189838	Hmga1	ENSMUST00000045802.6|2810417H13Rik|ENSMUSG00000040204.6|RIKEN cDNA 2810417H13 gene
mm10_v2_chr17_+_3397189_3397207	0.18806	Hmga1	ENSMUST00000072156.6|Tiam2|ENSMUSG00000023800.8|T cell lymphoma invasion and metastasis 2
mm10_v2_chrX_-_70365052_70365112	0.184279	Hmga1	ENSMUST00000101509.2|Ids|ENSMUSG00000035847.9|iduronate 2-sulfatase
mm10_v2_chr2_-_9878580_9878607	0.18408	Hmga1	ENSMUST00000102976.3|Gata3|ENSMUSG00000015619.10|GATA binding protein 3
mm10_v2_chr5_-_122354161_122354237	0.183852	Hmga1	ENSMUST00000117263.1|Rad9b|ENSMUSG00000038569.7|RAD9 homolog B 	ENSMUST00000049009.6|Rad9b|ENSMUSG00000038569.7|RAD9 homolog B
mm10_v2_chr5_-_124579045_124579131	0.177648	Hmga1	ENSMUST00000135361.1|Eif2b1|ENSMUSG00000029388.8|eukaryotic translation initiation factor 2B, subunit 1 (alpha) 	ENSMUST00000031334.8|Eif2b1|ENSMUSG00000029388.8|eukaryotic translation initiation factor 2B, subunit 1 (alpha)
mm10_v2_chrX_+_112604274_112604274	0.176665	Hmga1	ENSMUST00000071814.6|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chr6_-_39810881_39810988	0.172714	Hmga1	ENSMUST00000114797.1|Mrps33|ENSMUSG00000029918.8|mitochondrial ribosomal protein S33 	ENSMUST00000031978.8|Mrps33|ENSMUSG00000029918.8|mitochondrial ribosomal protein S33
mm10_v2_chr7_-_62420139_62420157	0.166475	Hmga1	ENSMUST00000094340.3|Mkrn3|ENSMUSG00000070527.3|makorin, ring finger protein, 3
mm10_v2_chr12_+_59131286_59131469	0.166286	Hmga1	ENSMUST00000176464.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000170992.2|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000176322.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr13_-_21531084_21531120	0.164961	Hmga1	ENSMUST00000045228.5|Zkscan8|ENSMUSG00000063894.8|zinc finger with KRAB and SCAN domains 8
mm10_v2_chr11_+_110968056_110968070	0.158979	Hmga1	ENSMUST00000125692.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr4_-_92191749_92191749	0.158837	Hmga1	ENSMUST00000123179.1|Gm12666|ENSMUSG00000066107.6|predicted gene 12666
mm10_v2_chr8_+_109778554_109778558	0.158624	Hmga1	ENSMUST00000093157.6|Ap1g1|ENSMUSG00000031731.10|adaptor protein complex AP-1, gamma 1 subunit
mm10_v2_chr11_+_52232009_52232041	0.154749	Hmga1	ENSMUST00000037324.5|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A 	ENSMUST00000166537.1|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A
mm10_v2_chr13_-_114388057_114388094	0.154062	Hmga1	ENSMUST00000022286.6|Ndufs4|ENSMUSG00000021764.6|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm10_v2_chr5_-_124578992_124579044	0.15007	Hmga1	ENSMUST00000128920.1|Eif2b1|ENSMUSG00000029388.8|eukaryotic translation initiation factor 2B, subunit 1 (alpha)
mm10_v2_chr14_-_26971232_26971232	0.149333	Hmga1	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chr10_+_34297421_34297513	0.146257	Hmga1	ENSMUST00000047935.6|Tspyl4|ENSMUSG00000039485.6|TSPY-like 4
mm10_v2_chr9_+_88581036_88581036	0.139752	Hmga1	ENSMUST00000164661.2|Trim43a|ENSMUSG00000090693.2|tripartite motif-containing 43A
mm10_v2_chr2_-_91182848_91182933	0.138923	Hmga1	ENSMUST00000111370.2|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000111376.1|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000099723.2|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain
mm10_v2_chr13_+_23738804_23738809	0.138685	Hmga1	ENSMUST00000040914.1|Hist1h1c|ENSMUSG00000036181.1|histone cluster 1, H1c
mm10_v2_chr18_+_56562443_56562593	0.138059	Hmga1	ENSMUST00000130163.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export 	ENSMUST00000132628.1|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export
mm10_v2_chr11_-_79962374_79962398	0.137936	Hmga1	ENSMUST00000108241.1|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000043152.5|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr1_-_156036473_156036480	0.137134	Hmga1	ENSMUST00000097527.3|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1 	ENSMUST00000027738.7|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr11_+_6415443_6415443	0.135863	Hmga1	ENSMUST00000132846.1|Ppia|ENSMUSG00000071866.5|peptidylprolyl isomerase A
mm10_v2_chr10_+_90576252_90576517	0.134694	Hmga1	ENSMUST00000182427.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182053.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182113.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr16_-_50330987_50331017	0.13295	Hmga1	ENSMUST00000114488.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chrX_+_75095854_75095922	0.124462	Hmga1	ENSMUST00000033776.8|Dkc1|ENSMUSG00000031403.8|dyskeratosis congenita 1, dyskerin
mm10_v2_chr16_+_20672716_20672859	0.120538	Hmga1	ENSMUST00000044783.7|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000115463.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000142344.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000073840.5|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000140576.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1 	ENSMUST00000115457.1|Eif4g1|ENSMUSG00000045983.9|eukaryotic translation initiation factor 4, gamma 1
mm10_v2_chr12_+_64917901_64917944	0.111433	Hmga1	ENSMUST00000058135.4|Gm527|ENSMUSG00000047227.4|predicted gene 527
mm10_v2_chrX_+_163911401_163911439	0.106662	Hmga1	ENSMUST00000140845.1|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr3_-_88772578_88772601	0.105188	Hmga1	ENSMUST00000090945.4|Syt11|ENSMUSG00000068923.8|synaptotagmin XI
mm10_v2_chr9_+_43259879_43259879	0.104783	Hmga1	ENSMUST00000179013.1|D630033O11Rik|ENSMUSG00000095385.1|RIKEN cDNA D630033O11 gene
mm10_v2_chr11_+_67966442_67966497	0.104782	Hmga1	ENSMUST00000021286.4|Stx8|ENSMUSG00000020903.7|syntaxin 8 	ENSMUST00000108675.1|Stx8|ENSMUSG00000020903.7|syntaxin 8
mm10_v2_chr14_-_52237791_52237791	0.104377	Hmga1	ENSMUST00000149975.1|Chd8|ENSMUSG00000053754.7|chromodomain helicase DNA binding protein 8
mm10_v2_chr19_-_32466575_32466575	0.10347	Hmga1	ENSMUST00000078034.3|Rpl9-ps6|ENSMUSG00000062456.3|ribosomal protein L9, pseudogene 6
mm10_v2_chr2_+_14388434_14388512	0.100756	Hmga1	ENSMUST00000133258.1|Slc39a12|ENSMUSG00000036949.10|solute carrier family 39 (zinc transporter), member 12
mm10_v2_chr11_+_101582236_101582312	0.0974364	Hmga1	ENSMUST00000039581.7|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000100403.2|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000107194.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A 	ENSMUST00000128614.1|Tmem106a|ENSMUSG00000034947.7|transmembrane protein 106A
mm10_v2_chr6_-_30390997_30391029	0.0949377	Hmga1	ENSMUST00000152391.2|Zc3hc1|ENSMUSG00000039130.12|zinc finger, C3HC type 1 	ENSMUST00000115184.1|Zc3hc1|ENSMUSG00000039130.12|zinc finger, C3HC type 1 	ENSMUST00000080812.7|Zc3hc1|ENSMUSG00000039130.12|zinc finger, C3HC type 1 	ENSMUST00000102992.3|Zc3hc1|ENSMUSG00000039130.12|zinc finger, C3HC type 1
mm10_v2_chr2_-_119541513_119541513	0.094347	Hmga1	ENSMUST00000171024.1|Exd1|ENSMUSG00000048647.3|exonuclease 3'-5' domain containing 1
mm10_v2_chr7_-_38019505_38019552	0.0886122	Hmga1	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr3_-_129755305_129755326	0.0883186	Hmga1	ENSMUST00000029653.2|Egf|ENSMUSG00000028017.3|epidermal growth factor
mm10_v2_chr3_+_28263205_28263215	0.0827273	Hmga1	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr13_+_21735055_21735070	0.0795323	Hmga1	ENSMUST00000087714.4|Hist1h4j|ENSMUSG00000067455.4|histone cluster 1, H4j
mm10_v2_chr6_+_91684061_91684132	0.0738929	Hmga1	ENSMUST00000032185.7|Slc6a6|ENSMUSG00000030096.7|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm10_v2_chr3_-_151762906_151762906	0.0730364	Hmga1	ENSMUST00000046739.4|Ifi44l|ENSMUSG00000039146.4|interferon-induced protein 44 like
mm10_v2_chr5_+_104046980_104047154	0.0714126	Hmga1	ENSMUST00000134313.1|Nudt9|ENSMUSG00000029310.7|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm10_v2_chr3_+_95588928_95588953	0.0662804	Hmga1	ENSMUST00000177390.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000098861.4|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000060323.5|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr15_-_99651580_99651656	0.0645488	Hmga1	ENSMUST00000171908.1|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000171702.1|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000109581.2|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000169810.1|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1 	ENSMUST00000023756.5|Racgap1|ENSMUSG00000023015.7|Rac GTPase-activating protein 1
mm10_v2_chr1_+_156838915_156838978	0.0643525	Hmga1	ENSMUST00000111720.1|Angptl1|ENSMUSG00000033544.6|angiopoietin-like 1
mm10_v2_chr7_+_67655414_67655447	0.061532	Hmga1	ENSMUST00000107470.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr13_+_18717289_18717316	0.0571328	Hmga1	ENSMUST00000072961.4|Vps41|ENSMUSG00000041236.7|vacuolar protein sorting 41 (yeast)
mm10_v2_chr9_+_122888471_122888471	0.0545806	Hmga1	ENSMUST00000063980.6|Zkscan7|ENSMUSG00000063488.5|zinc finger with KRAB and SCAN domains 7
mm10_v2_chr14_+_69029289_69029414	0.0515279	Hmga1	ENSMUST00000014957.8|Stc1|ENSMUSG00000014813.8|stanniocalcin 1
mm10_v2_chr14_+_47663756_47663756	0.0515164	Hmga1	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr19_+_9283231_9283265	0.048556	Hmga1	ENSMUST00000088040.4|Pcna-ps2|ENSMUSG00000067608.4|proliferating cell nuclear antigen pseudogene 2
mm10_v2_chrX_+_18162575_18162657	0.0415197	Hmga1	ENSMUST00000044484.6|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A 	ENSMUST00000052368.8|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A
mm10_v2_chr15_+_99074968_99075005	0.0401356	Hmga1	ENSMUST00000039665.6|Troap|ENSMUSG00000032783.8|trophinin associated protein
mm10_v2_chr11_-_69395333_69395478	0.0349646	Hmga1	ENSMUST00000108660.1|Cyb5d1|ENSMUSG00000044795.6|cytochrome b5 domain containing 1 	ENSMUST00000051620.4|Cyb5d1|ENSMUSG00000044795.6|cytochrome b5 domain containing 1
mm10_v2_chr1_-_30863256_30863256	0.0295868	Hmga1	ENSMUST00000088310.3|Phf3|ENSMUSG00000048874.9|PHD finger protein 3
mm10_v2_chr12_+_51348370_51348406	0.0250664	Hmga1	ENSMUST00000121521.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chrX_+_107255878_107256064	0.0214197	Hmga1	ENSMUST00000101294.2|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174 	ENSMUST00000118820.1|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174 	ENSMUST00000120971.1|Gpr174|ENSMUSG00000073008.5|G protein-coupled receptor 174
mm10_v2_chr1_+_180109192_180109265	0.0154429	Hmga1	ENSMUST00000143176.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000135056.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr15_+_41830921_41831001	0.0103174	Hmga1	ENSMUST00000166917.1|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr12_-_27160311_27160476	0.0100171	Hmga1	ENSMUST00000182473.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000177636.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000183238.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr11_+_110968016_110968042	0.00953691	Hmga1	ENSMUST00000106636.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENSMUST00000180023.1|Kcnj16|ENSMUSG00000051497.9|potassium inwardly-rectifying channel, subfamily J, member 16
mm10_v2_chr15_+_99006056_99006056	0.00419148	Hmga1	ENSMUST00000079818.3|Gm8973|ENSMUSG00000064081.3|predicted gene 8973
mm10_v2_chr12_+_52516077_52516077	0.00339876	Hmga1	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr8_+_40307458_40307458	0.00113335	Hmga1	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
