mm10_v2_chr2_+_71528657_71528683	6.42779	Hoxa4	ENSMUST00000126400.1|Dlx1|ENSMUSG00000041911.3|distal-less homeobox 1
mm10_v2_chr2_-_77519565_77519647	3.76816	Hoxa4	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr7_-_19699008_19699166	3.57694	Hoxa4	ENSMUST00000174355.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000172983.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174710.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000167646.2|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000003066.9|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174064.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E
mm10_v2_chr4_+_144892813_144892835	3.44989	Hoxa4	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr2_+_170731807_170731920	2.85617	Hoxa4	ENSMUST00000029075.4|Dok5|ENSMUSG00000027560.4|docking protein 5
mm10_v2_chr4_+_144893077_144893103	2.67915	Hoxa4	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr4_+_144893127_144893151	2.38687	Hoxa4	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr3_+_86070915_86070915	2.03679	Hoxa4	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr18_+_37435602_37435636	1.88769	Hoxa4	ENSMUST00000055495.5|Pcdhb12|ENSMUSG00000043458.5|protocadherin beta 12
mm10_v2_chr14_-_79771305_79771318	1.8417	Hoxa4	ENSMUST00000039568.5|Pcdh8|ENSMUSG00000036422.5|protocadherin 8
mm10_v2_chr1_-_190170671_190170744	1.59562	Hoxa4	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr12_+_38780284_38780349	1.51908	Hoxa4	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr3_+_5218546_5218561	1.48115	Hoxa4	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr5_+_17574726_17574899	1.34601	Hoxa4	ENSMUST00000169603.1|Sema3c|ENSMUSG00000028780.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm10_v2_chr12_+_38780817_38780854	1.28079	Hoxa4	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr15_+_32920723_32920826	1.25173	Hoxa4	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr2_+_109917639_109917656	1.25053	Hoxa4	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr18_+_76059458_76059501	1.20484	Hoxa4	ENSMUST00000167921.1|Zbtb7c|ENSMUSG00000044646.8|zinc finger and BTB domain containing 7C
mm10_v2_chr5_+_137030275_137030295	1.19577	Hoxa4	ENSMUST00000041543.8|Vgf|ENSMUSG00000037428.8|VGF nerve growth factor inducible
mm10_v2_chr15_-_56694525_56694554	1.15973	Hoxa4	ENSMUST00000050544.7|Has2|ENSMUSG00000022367.7|hyaluronan synthase 2
mm10_v2_chr3_+_5218516_5218544	1.11371	Hoxa4	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr18_+_37489465_37489465	1.10423	Hoxa4	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr2_+_90885860_90885872	1.07488	Hoxa4	ENSMUST00000111466.2|C1qtnf4|ENSMUSG00000040794.5|C1q and tumor necrosis factor related protein 4
mm10_v2_chr1_+_178529113_178529134	1.07429	Hoxa4	ENSMUST00000161017.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr3_-_80802789_80802840	1.07143	Hoxa4	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr18_+_37447641_37447674	1.04078	Hoxa4	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr2_+_70563435_70563461	1.01149	Hoxa4	ENSMUST00000123330.1|Gad1|ENSMUSG00000070880.4|glutamate decarboxylase 1
mm10_v2_chr9_-_29412204_29412277	0.969823	Hoxa4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr16_-_76373827_76373852	0.960261	Hoxa4	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr1_-_152766281_152766319	0.939237	Hoxa4	ENSMUST00000111859.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1 	ENSMUST00000148865.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chrX_+_136822781_136822840	0.931808	Hoxa4	ENSMUST00000113085.1|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr2_+_4400958_4400975	0.916367	Hoxa4	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr18_+_37355271_37355271	0.902271	Hoxa4	ENSMUST00000051163.1|Pcdhb8|ENSMUSG00000045876.3|protocadherin beta 8
mm10_v2_chr13_-_117025505_117025541	0.861205	Hoxa4	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr6_+_8949670_8949686	0.858594	Hoxa4	ENSMUST00000060369.3|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chrX_+_136822671_136822780	0.851388	Hoxa4	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr17_+_39846958_39847059	0.851323	Hoxa4	ENSMUST00000182010.1|Gm26924|ENSMUSG00000098178.1|predicted gene, 26924
mm10_v2_chr3_+_5218589_5218614	0.801529	Hoxa4	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr5_-_122002340_122002368	0.774699	Hoxa4	ENSMUST00000134326.1|Cux2|ENSMUSG00000042589.12|cut-like homeobox 2
mm10_v2_chr6_+_56832059_56832160	0.762421	Hoxa4	ENSMUST00000031795.7|Fkbp9|ENSMUSG00000029781.7|FK506 binding protein 9
mm10_v2_chr18_+_37300799_37300835	0.762388	Hoxa4	ENSMUST00000051754.1|Pcdhb3|ENSMUSG00000045498.1|protocadherin beta 3
mm10_v2_chr13_-_102958084_102958173	0.760793	Hoxa4	ENSMUST00000099202.3|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000172264.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr18_+_60963517_60963603	0.760511	Hoxa4	ENSMUST00000115295.2|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000039904.6|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr6_+_124304646_124304671	0.743646	Hoxa4	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr13_+_94875600_94875611	0.739221	Hoxa4	ENSMUST00000022195.10|Otp|ENSMUSG00000021685.10|orthopedia homolog (Drosophila)
mm10_v2_chr1_-_158356258_158356313	0.732501	Hoxa4	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr13_-_107890059_107890073	0.722236	Hoxa4	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr1_-_152766323_152766352	0.718345	Hoxa4	ENSMUST00000111857.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr12_+_38781093_38781129	0.715814	Hoxa4	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr13_+_58807884_58807902	0.702509	Hoxa4	ENSMUST00000079828.5|Ntrk2|ENSMUSG00000055254.8|neurotrophic tyrosine kinase, receptor, type 2
mm10_v2_chr12_+_91400990_91401022	0.699344	Hoxa4	ENSMUST00000021346.7|Tshr|ENSMUSG00000020963.8|thyroid stimulating hormone receptor 	ENSMUST00000021343.6|Tshr|ENSMUSG00000020963.8|thyroid stimulating hormone receptor
mm10_v2_chr19_-_28967794_28967852	0.689221	Hoxa4	ENSMUST00000162110.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr3_+_68572245_68572392	0.67867	Hoxa4	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr7_+_34251038_34251038	0.670594	Hoxa4	ENSMUST00000105172.1|Gm6096|ENSMUSG00000078380.1|predicted gene 6096
mm10_v2_chr9_-_32541589_32541602	0.660739	Hoxa4	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr9_-_49798729_49798855	0.660557	Hoxa4	ENSMUST00000166811.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr15_-_77956658_77956723	0.658132	Hoxa4	ENSMUST00000117725.1|Foxred2|ENSMUSG00000016552.7|FAD-dependent oxidoreductase domain containing 2 	ENSMUST00000016696.6|Foxred2|ENSMUSG00000016552.7|FAD-dependent oxidoreductase domain containing 2
mm10_v2_chr10_-_128525859_128525880	0.64019	Hoxa4	ENSMUST00000026427.6|Esyt1|ENSMUSG00000025366.7|extended synaptotagmin-like protein 1
mm10_v2_chr8_+_114205590_114205642	0.627651	Hoxa4	ENSMUST00000049509.6|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica) 	ENSMUST00000150963.1|Vat1l|ENSMUSG00000046844.6|vesicle amine transport protein 1 homolog-like (T. californica)
mm10_v2_chr8_-_84937347_84937367	0.613114	Hoxa4	ENSMUST00000109741.2|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1 	ENSMUST00000119820.1|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1
mm10_v2_chr18_+_37307445_37307462	0.60522	Hoxa4	ENSMUST00000056712.2|Pcdhb4|ENSMUSG00000045689.2|protocadherin beta 4
mm10_v2_chr1_-_130729249_130729260	0.6	Hoxa4	ENSMUST00000171479.1|Pfkfb2|ENSMUSG00000026409.8|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm10_v2_chr3_-_146781351_146781431	0.597269	Hoxa4	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr10_-_70655934_70655972	0.593003	Hoxa4	ENSMUST00000162144.1|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like 	ENSMUST00000162793.1|Phyhipl|ENSMUSG00000037747.3|phytanoyl-CoA hydroxylase interacting protein-like
mm10_v2_chr1_-_180193475_180193492	0.581017	Hoxa4	ENSMUST00000160482.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3 	ENSMUST00000170472.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3
mm10_v2_chr9_-_49798905_49798931	0.578426	Hoxa4	ENSMUST00000114476.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr15_+_99055164_99055183	0.571657	Hoxa4	ENSMUST00000047104.7|Prph|ENSMUSG00000023484.7|peripherin 	ENSMUST00000024249.3|Prph|ENSMUSG00000023484.7|peripherin
mm10_v2_chr12_+_29528382_29528468	0.568357	Hoxa4	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr6_+_134981998_134982002	0.566712	Hoxa4	ENSMUST00000167323.1|Apold1|ENSMUSG00000090698.1|apolipoprotein L domain containing 1
mm10_v2_chr4_+_119814495_119814526	0.565169	Hoxa4	ENSMUST00000106307.2|Hivep3|ENSMUSG00000028634.10|human immunodeficiency virus type I enhancer binding protein 3
mm10_v2_chr18_-_15063560_15063617	0.541296	Hoxa4	ENSMUST00000168989.1|Kctd1|ENSMUSG00000036225.8|potassium channel tetramerisation domain containing 1
mm10_v2_chr18_+_37341702_37341728	0.536204	Hoxa4	ENSMUST00000053037.3|Pcdhb7|ENSMUSG00000045062.3|protocadherin beta 7
mm10_v2_chr11_+_57011945_57011956	0.536133	Hoxa4	ENSMUST00000094179.4|Gria1|ENSMUSG00000020524.10|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm10_v2_chr19_+_55894508_55894534	0.534372	Hoxa4	ENSMUST00000142291.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr15_+_62037986_62038061	0.529609	Hoxa4	ENSMUST00000182956.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000182075.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000180432.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181416.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181657.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1
mm10_v2_chr7_+_144838590_144838614	0.527735	Hoxa4	ENSMUST00000105898.1|Fgf3|ENSMUSG00000031074.8|fibroblast growth factor 3
mm10_v2_chr13_-_102906046_102906111	0.519434	Hoxa4	ENSMUST00000171791.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr16_-_64786321_64786321	0.514878	Hoxa4	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chrX_-_150814265_150814345	0.513562	Hoxa4	ENSMUST00000026302.6|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000129768.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000112699.2|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr10_+_102158858_102158889	0.512283	Hoxa4	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr9_-_110624361_110624439	0.499082	Hoxa4	ENSMUST00000035069.9|Nradd|ENSMUSG00000032491.10|neurotrophin receptor associated death domain
mm10_v2_chr11_+_57011798_57011827	0.496336	Hoxa4	ENSMUST00000036315.9|Gria1|ENSMUSG00000020524.10|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm10_v2_chr13_+_63014934_63014934	0.496091	Hoxa4	ENSMUST00000091560.4|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr19_+_11965817_11965887	0.494989	Hoxa4	ENSMUST00000025590.9|Osbp|ENSMUSG00000024687.10|oxysterol binding protein
mm10_v2_chr13_+_42680565_42680623	0.471404	Hoxa4	ENSMUST00000128646.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr19_-_57197496_57197536	0.467964	Hoxa4	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr19_-_57197556_57197631	0.463823	Hoxa4	ENSMUST00000099294.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr4_-_129378116_129378116	0.461771	Hoxa4	ENSMUST00000030610.2|Zbtb8a|ENSMUSG00000028807.2|zinc finger and BTB domain containing 8a
mm10_v2_chr12_+_38783503_38783527	0.459881	Hoxa4	ENSMUST00000159334.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr6_+_86527312_86527401	0.459682	Hoxa4	ENSMUST00000181928.1|1600020E01Rik|ENSMUSG00000097048.1|RIKEN cDNA 1600020E01 gene
mm10_v2_chr15_+_18818895_18818947	0.458258	Hoxa4	ENSMUST00000166873.2|Cdh10|ENSMUSG00000022321.9|cadherin 10
mm10_v2_chr18_-_31949571_31949636	0.44599	Hoxa4	ENSMUST00000064016.5|Gpr17|ENSMUSG00000052229.5|G protein-coupled receptor 17
mm10_v2_chr5_-_146220901_146220987	0.441498	Hoxa4	ENSMUST00000169407.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000161331.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000159074.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000067837.3|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr2_-_116065047_116065133	0.439369	Hoxa4	ENSMUST00000028639.6|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000102538.4|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr14_-_30353468_30353535	0.438292	Hoxa4	ENSMUST00000112249.1|Cacna1d|ENSMUSG00000015968.10|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm10_v2_chr11_-_30986326_30986372	0.436963	Hoxa4	ENSMUST00000020553.4|Chac2|ENSMUSG00000020309.6|ChaC, cation transport regulator 2 	ENSMUST00000101394.4|Chac2|ENSMUSG00000020309.6|ChaC, cation transport regulator 2
mm10_v2_chr1_+_165788746_165788769	0.435406	Hoxa4	ENSMUST00000161559.2|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr19_-_57197435_57197460	0.433423	Hoxa4	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr2_-_120154600_120154611	0.424782	Hoxa4	ENSMUST00000028755.7|Ehd4|ENSMUSG00000027293.7|EH-domain containing 4
mm10_v2_chr2_-_116065798_116065853	0.421222	Hoxa4	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chrX_-_59166080_59166164	0.408128	Hoxa4	ENSMUST00000119306.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chr18_+_23752333_23752401	0.407622	Hoxa4	ENSMUST00000170802.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000155708.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000118826.2|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr1_+_165788681_165788728	0.401618	Hoxa4	ENSMUST00000161971.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000178336.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000005907.5|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000027849.4|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr3_-_122619442_122619553	0.399575	Hoxa4	ENSMUST00000162947.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr19_-_57197377_57197417	0.399097	Hoxa4	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr3_-_88177671_88177785	0.392974	Hoxa4	ENSMUST00000181837.1|1700113A16Rik|ENSMUSG00000096935.1|RIKEN cDNA 1700113A16 gene
mm10_v2_chr2_+_65930117_65930190	0.392861	Hoxa4	ENSMUST00000176109.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr12_+_65075582_65075617	0.388235	Hoxa4	ENSMUST00000058889.4|Fancm|ENSMUSG00000055884.7|Fanconi anemia, complementation group M
mm10_v2_chr15_-_37458523_37458581	0.385593	Hoxa4	ENSMUST00000116445.2|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr1_-_67038824_67038872	0.385442	Hoxa4	ENSMUST00000119559.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000149996.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000027149.5|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000113979.3|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1
mm10_v2_chr13_-_78196373_78196440	0.370549	Hoxa4	ENSMUST00000125176.2|Nr2f1|ENSMUSG00000069171.7|nuclear receptor subfamily 2, group F, member 1
mm10_v2_chr9_+_44398176_44398176	0.370496	Hoxa4	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr6_+_97210689_97210728	0.359724	Hoxa4	ENSMUST00000044681.6|Arl6ip5|ENSMUSG00000035199.6|ADP-ribosylation factor-like 6 interacting protein 5
mm10_v2_chrX_-_38252398_38252439	0.35252	Hoxa4	ENSMUST00000089056.3|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000089054.4|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000066498.7|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A
mm10_v2_chr6_+_5390387_5390427	0.349458	Hoxa4	ENSMUST00000183358.1|Asb4|ENSMUSG00000042607.9|ankyrin repeat and SOCS box-containing 4
mm10_v2_chr4_-_62519885_62519967	0.34335	Hoxa4	ENSMUST00000107444.1|Alad|ENSMUSG00000028393.4|aminolevulinate, delta-, dehydratase 	ENSMUST00000030090.3|Alad|ENSMUSG00000028393.4|aminolevulinate, delta-, dehydratase
mm10_v2_chr6_+_124916863_124916863	0.340501	Hoxa4	ENSMUST00000069553.2|A230083G16Rik|ENSMUSG00000055818.2|RIKEN cDNA A230083G16 gene
mm10_v2_chr18_+_37819543_37819570	0.338508	Hoxa4	ENSMUST00000055935.5|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr1_-_165934900_165935036	0.331538	Hoxa4	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr4_+_109343029_109343081	0.327965	Hoxa4	ENSMUST00000030281.5|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr4_+_5724304_5724357	0.313573	Hoxa4	ENSMUST00000108380.1|Fam110b|ENSMUSG00000049119.8|family with sequence similarity 110, member B
mm10_v2_chr2_-_65529275_65529404	0.313557	Hoxa4	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr13_-_102905740_102905814	0.307553	Hoxa4	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr3_+_88965812_88965812	0.302193	Hoxa4	ENSMUST00000090933.4|Ash1l|ENSMUSG00000028053.7|ash1 (absent, small, or homeotic)-like (Drosophila)
mm10_v2_chr11_+_52098681_52098796	0.293118	Hoxa4	ENSMUST00000020608.2|Ppp2ca|ENSMUSG00000020349.4|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm10_v2_chr15_-_37459327_37459380	0.289299	Hoxa4	ENSMUST00000119730.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta 	ENSMUST00000120746.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr17_-_26886175_26886248	0.284742	Hoxa4	ENSMUST00000108741.2|Gm17382|ENSMUSG00000078838.2|predicted gene, 17382
mm10_v2_chr15_-_99820072_99820154	0.282441	Hoxa4	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chr1_+_93478964_93479108	0.281656	Hoxa4	ENSMUST00000027495.8|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000136182.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000131175.2|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000179353.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000172165.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000153826.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000129211.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000168776.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000112912.1|Sept2|ENSMUSG00000026276.11|septin 2
mm10_v2_chr9_-_42399915_42399929	0.279865	Hoxa4	ENSMUST00000042190.7|Tecta|ENSMUSG00000037705.7|tectorin alpha
mm10_v2_chr14_-_46390501_46390550	0.275068	Hoxa4	ENSMUST00000100676.2|Bmp4|ENSMUSG00000021835.8|bone morphogenetic protein 4
mm10_v2_chr6_-_56901870_56901891	0.274784	Hoxa4	ENSMUST00000101367.2|Nt5c3|ENSMUSG00000029780.8|5'-nucleotidase, cytosolic III
mm10_v2_chr1_+_132298606_132298631	0.273695	Hoxa4	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr12_+_38783455_38783482	0.268582	Hoxa4	ENSMUST00000161980.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160701.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr5_-_124187150_124187225	0.262172	Hoxa4	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr3_-_146682410_146682522	0.260926	Hoxa4	ENSMUST00000124931.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13 	ENSMUST00000147113.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13
mm10_v2_chr14_+_116925379_116925430	0.258216	Hoxa4	ENSMUST00000088483.3|Gpc6|ENSMUSG00000058571.4|glypican 6
mm10_v2_chr5_-_111761697_111761727	0.243858	Hoxa4	ENSMUST00000129146.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene 	ENSMUST00000137398.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene 	ENSMUST00000129065.1|E130006D01Rik|ENSMUSG00000085271.1|RIKEN cDNA E130006D01 gene
mm10_v2_chr17_-_43667015_43667163	0.240061	Hoxa4	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr6_+_106769120_106769234	0.240008	Hoxa4	ENSMUST00000113247.1|Trnt1|ENSMUSG00000013736.10|tRNA nucleotidyl transferase, CCA-adding, 1 	ENSMUST00000113249.1|Trnt1|ENSMUSG00000013736.10|tRNA nucleotidyl transferase, CCA-adding, 1 	ENSMUST00000057578.9|Trnt1|ENSMUSG00000013736.10|tRNA nucleotidyl transferase, CCA-adding, 1 	ENSMUST00000113248.1|Trnt1|ENSMUSG00000013736.10|tRNA nucleotidyl transferase, CCA-adding, 1
mm10_v2_chr11_-_33203588_33203599	0.238363	Hoxa4	ENSMUST00000037746.6|Tlx3|ENSMUSG00000040610.6|T cell leukemia, homeobox 3
mm10_v2_chr6_+_43265582_43265681	0.236787	Hoxa4	ENSMUST00000031750.7|Arhgef5|ENSMUSG00000033542.7|Rho guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr19_+_8840519_8840549	0.233644	Hoxa4	ENSMUST00000086058.6|Bscl2|ENSMUSG00000071657.6|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm10_v2_chr11_+_103966716_103966871	0.23316	Hoxa4	ENSMUST00000057921.3|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2 	ENSMUST00000063347.5|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2
mm10_v2_chr10_+_39612934_39612934	0.231948	Hoxa4	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr10_+_4611971_4612021	0.230386	Hoxa4	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr4_+_105790534_105790534	0.208659	Hoxa4	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr3_+_95164306_95164374	0.198953	Hoxa4	ENSMUST00000107217.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENSMUST00000168321.1|Sema6c|ENSMUSG00000038777.13|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm10_v2_chr5_+_76809964_76810010	0.198778	Hoxa4	ENSMUST00000120818.1|C530008M17Rik|ENSMUSG00000036377.12|RIKEN cDNA C530008M17 gene
mm10_v2_chr12_+_109546409_109546493	0.198733	Hoxa4	ENSMUST00000143847.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr13_+_63015167_63015167	0.198528	Hoxa4	ENSMUST00000021911.8|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr12_+_109546333_109546398	0.196838	Hoxa4	ENSMUST00000166636.2|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr12_+_84362029_84362064	0.195621	Hoxa4	ENSMUST00000110278.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast) 	ENSMUST00000145522.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr10_-_127121125_127121160	0.192905	Hoxa4	ENSMUST00000164259.1|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma 	ENSMUST00000080975.4|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma
mm10_v2_chr3_+_134236483_134236500	0.191382	Hoxa4	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr4_+_130107556_130107606	0.188119	Hoxa4	ENSMUST00000030563.5|Pef1|ENSMUSG00000028779.10|penta-EF hand domain containing 1
mm10_v2_chr14_+_34170640_34170655	0.178382	Hoxa4	ENSMUST00000104925.3|Rpl23a-ps3|ENSMUSG00000078126.3|ribosomal protein L23A, pseudogene 3
mm10_v2_chr14_-_46390576_46390669	0.173775	Hoxa4	ENSMUST00000074077.5|Bmp4|ENSMUSG00000021835.8|bone morphogenetic protein 4
mm10_v2_chrX_+_20687954_20688039	0.170819	Hoxa4	ENSMUST00000115364.1|Cdk16|ENSMUSG00000031065.8|cyclin-dependent kinase 16
mm10_v2_chr10_+_84756055_84756084	0.164225	Hoxa4	ENSMUST00000060397.6|Rfx4|ENSMUSG00000020037.9|regulatory factor X, 4 (influences HLA class II expression)
mm10_v2_chr3_+_116562965_116563004	0.164172	Hoxa4	ENSMUST00000029573.5|Lrrc39|ENSMUSG00000027961.5|leucine rich repeat containing 39
mm10_v2_chr5_+_30814722_30814776	0.158737	Hoxa4	ENSMUST00000114724.1|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr17_+_24850654_24850683	0.157443	Hoxa4	ENSMUST00000130989.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000024974.9|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr2_+_83644435_83644490	0.154784	Hoxa4	ENSMUST00000081591.6|Zc3h15|ENSMUSG00000027091.8|zinc finger CCCH-type containing 15
mm10_v2_chr5_-_122614445_122614544	0.152159	Hoxa4	ENSMUST00000127220.1|Ift81|ENSMUSG00000029469.8|intraflagellar transport 81 	ENSMUST00000031426.7|Ift81|ENSMUSG00000029469.8|intraflagellar transport 81
mm10_v2_chr5_+_42067960_42067960	0.151929	Hoxa4	ENSMUST00000087332.4|Gm16223|ENSMUSG00000067285.4|predicted gene 16223
mm10_v2_chr1_-_52091066_52091066	0.14451	Hoxa4	ENSMUST00000105087.1|Gm3940|ENSMUSG00000078291.1|predicted gene 3940
mm10_v2_chr13_+_38204928_38204962	0.138215	Hoxa4	ENSMUST00000091641.5|Snrnp48|ENSMUSG00000021431.8|small nuclear ribonucleoprotein 48 (U11/U12) 	ENSMUST00000178564.1|Snrnp48|ENSMUSG00000021431.8|small nuclear ribonucleoprotein 48 (U11/U12)
mm10_v2_chr9_-_55919605_55919605	0.136227	Hoxa4	ENSMUST00000037408.8|Scaper|ENSMUSG00000034007.9|S phase cyclin A-associated protein in the ER
mm10_v2_chr17_-_84187939_84187954	0.135043	Hoxa4	ENSMUST00000060366.6|Zfp36l2|ENSMUSG00000045817.8|zinc finger protein 36, C3H type-like 2
mm10_v2_chrX_+_159840463_159840481	0.132556	Hoxa4	ENSMUST00000112451.1|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1 	ENSMUST00000112453.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr7_-_127260677_127260709	0.130113	Hoxa4	ENSMUST00000035276.4|Dctpp1|ENSMUSG00000042462.4|dCTP pyrophosphatase 1
mm10_v2_chr10_-_79908891_79908936	0.124888	Hoxa4	ENSMUST00000165684.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000164705.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000105378.2|Med16|ENSMUSG00000013833.9|mediator complex subunit 16 	ENSMUST00000170409.1|Med16|ENSMUSG00000013833.9|mediator complex subunit 16
mm10_v2_chr12_-_84361802_84361838	0.124771	Hoxa4	ENSMUST00000021659.1|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B 	ENSMUST00000065536.2|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B
mm10_v2_chr4_+_138775735_138775784	0.123709	Hoxa4	ENSMUST00000030528.2|Pla2g2d|ENSMUSG00000041202.6|phospholipase A2, group IID
mm10_v2_chr16_+_4639941_4639978	0.117461	Hoxa4	ENSMUST00000038770.3|Vasn|ENSMUSG00000039646.5|vasorin
mm10_v2_chr12_+_84361636_84361657	0.115497	Hoxa4	ENSMUST00000110276.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr12_-_86079019_86079041	0.108843	Hoxa4	ENSMUST00000003687.6|Tgfb3|ENSMUSG00000021253.6|transforming growth factor, beta 3
mm10_v2_chr3_+_94837533_94837567	0.106353	Hoxa4	ENSMUST00000107270.2|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr13_+_23555023_23555039	0.103432	Hoxa4	ENSMUST00000045301.6|Hist1h1d|ENSMUSG00000052565.5|histone cluster 1, H1d
mm10_v2_chr2_-_6884975_6884996	0.101693	Hoxa4	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr1_+_180111339_180111339	0.101062	Hoxa4	ENSMUST00000145181.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr12_-_27160311_27160476	0.101059	Hoxa4	ENSMUST00000182473.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000177636.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000183238.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr6_+_63255971_63256036	0.100403	Hoxa4	ENSMUST00000159561.1|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2 	ENSMUST00000095852.3|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2
mm10_v2_chr12_-_56535047_56535106	0.0988776	Hoxa4	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr8_+_4238815_4238886	0.097175	Hoxa4	ENSMUST00000003027.7|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000110999.1|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr15_+_85116829_85116829	0.0962592	Hoxa4	ENSMUST00000105085.1|Gm10923|ENSMUSG00000078289.1|predicted gene 10923
mm10_v2_chr10_+_53337686_53337724	0.0953675	Hoxa4	ENSMUST00000046221.6|Pln|ENSMUSG00000038583.6|phospholamban 	ENSMUST00000163319.1|Pln|ENSMUSG00000038583.6|phospholamban
mm10_v2_chr2_+_80638798_80638834	0.0952304	Hoxa4	ENSMUST00000028382.6|Nup35|ENSMUSG00000026999.8|nucleoporin 35 	ENSMUST00000124377.1|Nup35|ENSMUSG00000026999.8|nucleoporin 35
mm10_v2_chr8_+_106059562_106059623	0.093752	Hoxa4	ENSMUST00000109308.1|Nfatc3|ENSMUSG00000031902.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm10_v2_chr14_-_77252327_77252328	0.0857037	Hoxa4	ENSMUST00000099431.4|Gm10132|ENSMUSG00000063556.4|predicted gene 10132
mm10_v2_chr8_-_60954726_60954790	0.0842592	Hoxa4	ENSMUST00000110302.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr12_+_84361968_84362018	0.0838363	Hoxa4	ENSMUST00000021661.6|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr12_+_10390756_10390836	0.0833699	Hoxa4	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr8_+_4238733_4238767	0.0816841	Hoxa4	ENSMUST00000110998.2|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000062686.4|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr7_-_142661858_142661880	0.0816819	Hoxa4	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr13_-_55362782_55362804	0.0805928	Hoxa4	ENSMUST00000021940.7|Lman2|ENSMUSG00000021484.7|lectin, mannose-binding 2
mm10_v2_chr14_+_79515618_79515694	0.0741713	Hoxa4	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr12_-_57546121_57546141	0.0729277	Hoxa4	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr2_-_5676046_5676065	0.0688762	Hoxa4	ENSMUST00000114987.3|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr11_-_30268169_30268191	0.0665475	Hoxa4	ENSMUST00000006629.7|Sptbn1|ENSMUSG00000020315.12|spectrin beta, non-erythrocytic 1
mm10_v2_chr1_+_45981548_45981548	0.064273	Hoxa4	ENSMUST00000085632.2|Rpl23a-ps1|ENSMUSG00000070896.1|ribosomal protein 23A, pseudogene 1
mm10_v2_chr1_+_180101144_180101144	0.058407	Hoxa4	ENSMUST00000133890.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr6_+_135011609_135011653	0.0569081	Hoxa4	ENSMUST00000032326.4|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000130851.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000154558.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm10_v2_chr10_-_93311073_93311161	0.0473218	Hoxa4	ENSMUST00000008542.5|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr10_+_87859062_87859094	0.0469082	Hoxa4	ENSMUST00000095360.4|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr5_+_64812336_64812350	0.0415912	Hoxa4	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr11_-_121673103_121673153	0.041378	Hoxa4	ENSMUST00000067399.7|B3gntl1|ENSMUSG00000046605.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 	ENSMUST00000062654.7|B3gntl1|ENSMUSG00000046605.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
mm10_v2_chrX_-_20950597_20950613	0.0385996	Hoxa4	ENSMUST00000009550.7|Elk1|ENSMUSG00000009406.7|ELK1, member of ETS oncogene family
mm10_v2_chr2_-_72986716_72986716	0.0343496	Hoxa4	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr3_+_94837702_94837723	0.0262225	Hoxa4	ENSMUST00000107266.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000042402.5|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000107269.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr16_-_76403673_76403717	0.0250589	Hoxa4	ENSMUST00000052867.7|Gm9843|ENSMUSG00000050299.7|predicted gene 9843
mm10_v2_chr16_+_22857845_22857914	0.0212882	Hoxa4	ENSMUST00000004574.7|Dnajb11|ENSMUSG00000004460.10|DnaJ (Hsp40) homolog, subfamily B, member 11 	ENSMUST00000178320.1|Dnajb11|ENSMUSG00000004460.10|DnaJ (Hsp40) homolog, subfamily B, member 11 	ENSMUST00000166487.2|Dnajb11|ENSMUSG00000004460.10|DnaJ (Hsp40) homolog, subfamily B, member 11
mm10_v2_chr10_-_119240006_119240092	0.0201502	Hoxa4	ENSMUST00000020315.6|Cand1|ENSMUSG00000020114.6|cullin associated and neddylation disassociated 1
mm10_v2_chrX_+_7579666_7579693	0.0201156	Hoxa4	ENSMUST00000115740.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3 	ENSMUST00000115739.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3
mm10_v2_chr18_-_42579652_42579790	0.0196712	Hoxa4	ENSMUST00000054738.3|Gpr151|ENSMUSG00000042816.3|G protein-coupled receptor 151
mm10_v2_chr16_-_22857514_22857576	0.0180201	Hoxa4	ENSMUST00000004576.6|Tbccd1|ENSMUSG00000004462.6|TBCC domain containing 1
mm10_v2_chrM_+_10167_10167	0.00623804	Hoxa4	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr17_+_24850515_24850591	0.0033696	Hoxa4	ENSMUST00000154363.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000169200.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr2_+_70474923_70474923	0.000935516	Hoxa4	ENSMUST00000100043.2|Sp5|ENSMUSG00000075304.2|trans-acting transcription factor 5
mm10_v2_chr1_-_74601345_74601402	0.000145844	Hoxa4	ENSMUST00000136078.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000132081.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000113721.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000027357.5|Rnf25|ENSMUSG00000026171.6|ring finger protein 25
