mm10_v2_chr12_+_38783503_38783527	11.0963	Nkx2-3	ENSMUST00000159334.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_+_38783455_38783482	9.01274	Nkx2-3	ENSMUST00000161980.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160701.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr6_-_23248264_23248390	6.86699	Nkx2-3	ENSMUST00000031709.5|Fezf1|ENSMUSG00000029697.5|Fez family zinc finger 1
mm10_v2_chr5_+_139543889_139543904	4.03818	Nkx2-3	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr1_+_6730051_6730117	3.81081	Nkx2-3	ENSMUST00000043578.6|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131467.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000150761.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000151281.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr1_+_6734827_6734874	3.58974	Nkx2-3	ENSMUST00000139838.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr10_-_6980376_6980398	3.48919	Nkx2-3	ENSMUST00000105617.1|Ipcef1|ENSMUSG00000064065.9|interaction protein for cytohesin exchange factors 1
mm10_v2_chr12_+_38780284_38780349	3.29348	Nkx2-3	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr12_+_38780817_38780854	3.12231	Nkx2-3	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr2_+_136057927_136057981	2.82	Nkx2-3	ENSMUST00000057503.6|Lamp5|ENSMUSG00000027270.8|lysosomal-associated membrane protein family, member 5
mm10_v2_chr3_+_102010138_102010171	2.79712	Nkx2-3	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr2_-_114013619_114013638	2.62474	Nkx2-3	ENSMUST00000090275.4|Gjd2|ENSMUSG00000068615.4|gap junction protein, delta 2
mm10_v2_chr14_+_75455957_75455996	2.59011	Nkx2-3	ENSMUST00000164848.1|Siah3|ENSMUSG00000091722.1|seven in absentia homolog 3 (Drosophila)
mm10_v2_chr6_+_34354119_34354151	2.56184	Nkx2-3	ENSMUST00000038406.6|Akr1b8|ENSMUSG00000029762.6|aldo-keto reductase family 1, member B8
mm10_v2_chr14_+_73237891_73238007	2.46144	Nkx2-3	ENSMUST00000044405.6|Lpar6|ENSMUSG00000033446.6|lysophosphatidic acid receptor 6
mm10_v2_chr3_+_55782500_55782521	2.38295	Nkx2-3	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr18_+_50030977_50031043	2.24338	Nkx2-3	ENSMUST00000145726.1|Tnfaip8|ENSMUSG00000062210.7|tumor necrosis factor, alpha-induced protein 8 	ENSMUST00000128377.1|Tnfaip8|ENSMUSG00000062210.7|tumor necrosis factor, alpha-induced protein 8
mm10_v2_chr6_+_15196949_15197102	2.1134	Nkx2-3	ENSMUST00000151301.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000131414.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000140557.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115469.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr14_+_59625281_59625318	2.10277	Nkx2-3	ENSMUST00000053949.5|Shisa2|ENSMUSG00000044461.5|shisa homolog 2 (Xenopus laevis)
mm10_v2_chr3_+_134236483_134236500	1.99603	Nkx2-3	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr18_-_84086379_84086404	1.96933	Nkx2-3	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr1_+_110099295_110099295	1.9457	Nkx2-3	ENSMUST00000134301.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr3_-_86548268_86548290	1.90103	Nkx2-3	ENSMUST00000077524.3|Mab21l2|ENSMUSG00000057777.3|mab-21-like 2 (C. elegans)
mm10_v2_chr12_+_38781093_38781129	1.77491	Nkx2-3	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr13_-_114458720_114458736	1.73076	Nkx2-3	ENSMUST00000022287.5|Fst|ENSMUSG00000021765.7|follistatin
mm10_v2_chr2_+_152847993_152848076	1.72489	Nkx2-3	ENSMUST00000028969.8|Tpx2|ENSMUSG00000027469.10|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm10_v2_chr3_-_110143937_110144011	1.61343	Nkx2-3	ENSMUST00000051253.3|Ntng1|ENSMUSG00000050836.3|netrin G1
mm10_v2_chr4_-_36056726_36056726	1.54115	Nkx2-3	ENSMUST00000108124.3|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr3_-_36571952_36572150	1.54011	Nkx2-3	ENSMUST00000029270.3|Ccna2|ENSMUSG00000027715.3|cyclin A2
mm10_v2_chr1_-_183147461_183147461	1.52608	Nkx2-3	ENSMUST00000171366.1|Disp1|ENSMUSG00000030768.6|dispatched homolog 1 (Drosophila)
mm10_v2_chr9_-_96437434_96437434	1.45093	Nkx2-3	ENSMUST00000070500.2|BC043934|ENSMUSG00000056418.2|cDNA sequence BC043934
mm10_v2_chr4_-_36136463_36136463	1.44712	Nkx2-3	ENSMUST00000098151.2|Lingo2|ENSMUSG00000045083.8|leucine rich repeat and Ig domain containing 2
mm10_v2_chr5_+_92897981_92898052	1.43222	Nkx2-3	ENSMUST00000113051.2|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr8_+_45627709_45627803	1.42908	Nkx2-3	ENSMUST00000134321.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000135336.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr8_+_127064022_127064086	1.38676	Nkx2-3	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr3_+_125404072_125404131	1.374	Nkx2-3	ENSMUST00000173932.1|Ndst4|ENSMUSG00000027971.10|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm10_v2_chr2_-_18048784_18048822	1.35896	Nkx2-3	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr2_-_166155272_166155286	1.34744	Nkx2-3	ENSMUST00000088086.3|Sulf2|ENSMUSG00000006800.7|sulfatase 2
mm10_v2_chr13_-_78196373_78196440	1.31406	Nkx2-3	ENSMUST00000125176.2|Nr2f1|ENSMUSG00000069171.7|nuclear receptor subfamily 2, group F, member 1
mm10_v2_chr19_+_8740712_8740723	1.30504	Nkx2-3	ENSMUST00000163172.1|1700092M07Rik|ENSMUSG00000090840.1|RIKEN cDNA 1700092M07 gene
mm10_v2_chr2_+_181767040_181767073	1.27062	Nkx2-3	ENSMUST00000108756.1|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr2_-_166155624_166155671	1.26374	Nkx2-3	ENSMUST00000109249.2|Sulf2|ENSMUSG00000006800.7|sulfatase 2
mm10_v2_chr8_+_45628176_45628219	1.25967	Nkx2-3	ENSMUST00000130850.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr2_+_181767283_181767322	1.25757	Nkx2-3	ENSMUST00000108757.2|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr1_+_187997821_187997834	1.21624	Nkx2-3	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr1_+_187997835_187997882	1.20848	Nkx2-3	ENSMUST00000110938.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr1_-_78968079_78968079	1.18938	Nkx2-3	ENSMUST00000049117.5|Gm5830|ENSMUSG00000072978.2|predicted pseudogene 5830
mm10_v2_chr4_-_110286581_110286617	1.1868	Nkx2-3	ENSMUST00000138972.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr18_+_4920509_4920586	1.14371	Nkx2-3	ENSMUST00000126977.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr1_+_66321708_66321719	1.12548	Nkx2-3	ENSMUST00000114013.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr8_-_109251698_109251728	1.09536	Nkx2-3	ENSMUST00000079189.3|4922502B01Rik|ENSMUSG00000057387.3|RIKEN cDNA 4922502B01 gene
mm10_v2_chr8_+_45627946_45627975	1.09368	Nkx2-3	ENSMUST00000145458.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr7_-_116038734_116038750	1.07251	Nkx2-3	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr4_-_45532470_45532470	1.0653	Nkx2-3	ENSMUST00000147448.1|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr4_-_129261394_129261406	1.05072	Nkx2-3	ENSMUST00000145261.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr4_-_110292719_110292732	1.05052	Nkx2-3	ENSMUST00000106601.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr12_+_58211772_58211804	0.997575	Nkx2-3	ENSMUST00000110671.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1 	ENSMUST00000044299.2|Sstr1|ENSMUSG00000035431.4|somatostatin receptor 1
mm10_v2_chrX_-_23285532_23285578	0.987397	Nkx2-3	ENSMUST00000115319.2|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr3_+_125404292_125404340	0.986009	Nkx2-3	ENSMUST00000144344.1|Ndst4|ENSMUSG00000027971.10|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm10_v2_chr17_-_48432723_48432741	0.96652	Nkx2-3	ENSMUST00000046549.3|Apobec2|ENSMUSG00000040694.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm10_v2_chr2_-_18048347_18048449	0.954908	Nkx2-3	ENSMUST00000066885.5|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr13_-_36734450_36734492	0.954353	Nkx2-3	ENSMUST00000037623.8|Nrn1|ENSMUSG00000039114.9|neuritin 1
mm10_v2_chr3_-_88410295_88410351	0.94818	Nkx2-3	ENSMUST00000056370.7|Pmf1|ENSMUSG00000028066.10|polyamine-modulated factor 1
mm10_v2_chr3_+_40800778_40800786	0.936445	Nkx2-3	ENSMUST00000169566.1|Plk4|ENSMUSG00000025758.5|polo-like kinase 4
mm10_v2_chr16_-_63864114_63864182	0.914364	Nkx2-3	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr5_-_5266038_5266292	0.899737	Nkx2-3	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr18_+_4993795_4993819	0.896695	Nkx2-3	ENSMUST00000153016.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr14_-_48667508_48667644	0.871795	Nkx2-3	ENSMUST00000144465.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000133479.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000119070.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000152018.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr2_-_72986716_72986716	0.830112	Nkx2-3	ENSMUST00000112062.1|Gm11084|ENSMUSG00000079286.1|predicted gene 11084
mm10_v2_chr14_-_12345847_12345872	0.794415	Nkx2-3	ENSMUST00000022262.4|Fezf2|ENSMUSG00000021743.5|Fez family zinc finger 2
mm10_v2_chr2_+_125859134_125859225	0.769694	Nkx2-3	ENSMUST00000028636.6|Galk2|ENSMUSG00000027207.9|galactokinase 2 	ENSMUST00000125084.1|Galk2|ENSMUSG00000027207.9|galactokinase 2
mm10_v2_chr15_-_13173607_13173644	0.760655	Nkx2-3	ENSMUST00000036439.4|Cdh6|ENSMUSG00000039385.4|cadherin 6
mm10_v2_chr19_+_23723279_23723279	0.743629	Nkx2-3	ENSMUST00000067077.1|Gm9938|ENSMUSG00000054178.1|predicted gene 9938
mm10_v2_chr1_+_66322102_66322119	0.706549	Nkx2-3	ENSMUST00000123647.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr9_-_16378231_16378231	0.688987	Nkx2-3	ENSMUST00000082170.5|Fat3|ENSMUSG00000074505.4|FAT tumor suppressor homolog 3 (Drosophila)
mm10_v2_chr1_-_172027251_172027268	0.656011	Nkx2-3	ENSMUST00000138714.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr5_+_8893677_8893745	0.654803	Nkx2-3	ENSMUST00000003717.8|Abcb4|ENSMUSG00000042476.8|ATP-binding cassette, sub-family B (MDR/TAP), member 4
mm10_v2_chr17_-_35697971_35698001	0.652539	Nkx2-3	ENSMUST00000146472.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr6_+_54039558_54039575	0.647754	Nkx2-3	ENSMUST00000046856.7|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr1_+_19212054_19212106	0.638391	Nkx2-3	ENSMUST00000064976.4|Tfap2b|ENSMUSG00000025927.7|transcription factor AP-2 beta
mm10_v2_chr10_-_80421847_80421876	0.63671	Nkx2-3	ENSMUST00000156244.1|Tcf3|ENSMUSG00000020167.8|transcription factor 3
mm10_v2_chr12_+_52699297_52699411	0.617734	Nkx2-3	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr3_+_159839729_159839745	0.61418	Nkx2-3	ENSMUST00000068952.5|Wls|ENSMUSG00000028173.6|wntless homolog (Drosophila)
mm10_v2_chr1_-_172027269_172027313	0.613293	Nkx2-3	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr4_-_110290884_110290913	0.609672	Nkx2-3	ENSMUST00000142722.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr18_+_88971790_88971790	0.594629	Nkx2-3	ENSMUST00000023828.7|Rttn|ENSMUSG00000023066.9|rotatin
mm10_v2_chr6_-_148946146_148946182	0.58003	Nkx2-3	ENSMUST00000132696.1|Fam60a|ENSMUSG00000039985.8|family with sequence similarity 60, member A
mm10_v2_chr14_-_69707493_69707543	0.57411	Nkx2-3	ENSMUST00000121142.1|R3hcc1|ENSMUSG00000034194.10|R3H domain and coiled-coil containing 1
mm10_v2_chr18_-_75697639_75697697	0.567784	Nkx2-3	ENSMUST00000165559.1|Ctif|ENSMUSG00000052928.8|CBP80/20-dependent translation initiation factor
mm10_v2_chrX_-_93832106_93832201	0.567597	Nkx2-3	ENSMUST00000045748.6|Pdk3|ENSMUSG00000035232.8|pyruvate dehydrogenase kinase, isoenzyme 3
mm10_v2_chr10_+_94576254_94576270	0.563497	Nkx2-3	ENSMUST00000117929.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr8_+_23669653_23669671	0.563263	Nkx2-3	ENSMUST00000042352.4|Zmat4|ENSMUSG00000037492.9|zinc finger, matrin type 4
mm10_v2_chr11_+_6560183_6560240	0.561951	Nkx2-3	ENSMUST00000109722.2|Ccm2|ENSMUSG00000000378.9|cerebral cavernous malformation 2
mm10_v2_chrX_+_37126777_37126795	0.551653	Nkx2-3	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr3_-_87174657_87174747	0.549715	Nkx2-3	ENSMUST00000159976.1|Kirrel|ENSMUSG00000041734.9|kin of IRRE like (Drosophila) 	ENSMUST00000107618.2|Kirrel|ENSMUSG00000041734.9|kin of IRRE like (Drosophila)
mm10_v2_chr14_-_62454793_62454793	0.540722	Nkx2-3	ENSMUST00000128573.1|Gucy1b2|ENSMUSG00000021933.5|guanylate cyclase 1, soluble, beta 2
mm10_v2_chrX_-_48208566_48208691	0.538844	Nkx2-3	ENSMUST00000037960.4|Zdhhc9|ENSMUSG00000036985.6|zinc finger, DHHC domain containing 9
mm10_v2_chr10_+_75037066_75037100	0.533693	Nkx2-3	ENSMUST00000147802.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family 	ENSMUST00000020391.5|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr4_-_138725262_138725267	0.533308	Nkx2-3	ENSMUST00000105811.2|Ubxn10|ENSMUSG00000043621.7|UBX domain protein 10
mm10_v2_chr19_+_24875679_24875689	0.523195	Nkx2-3	ENSMUST00000073080.5|Gm10053|ENSMUSG00000058927.5|predicted gene 10053
mm10_v2_chr10_-_95673451_95673451	0.512839	Nkx2-3	ENSMUST00000099328.1|Anapc15-ps|ENSMUSG00000074780.1|anaphase prompoting complex C subunit 15, pseudogene
mm10_v2_chr14_-_69707546_69707584	0.506596	Nkx2-3	ENSMUST00000118374.1|R3hcc1|ENSMUSG00000034194.10|R3H domain and coiled-coil containing 1
mm10_v2_chr16_+_10812915_10812915	0.494148	Nkx2-3	ENSMUST00000115822.1|Gm11172|ENSMUSG00000079740.1|predicted gene 11172
mm10_v2_chr16_-_16829276_16829349	0.492227	Nkx2-3	ENSMUST00000023468.5|Spag6|ENSMUSG00000022783.5|sperm associated antigen 6
mm10_v2_chr19_-_53589067_53589067	0.472416	Nkx2-3	ENSMUST00000095978.3|Nutf2-ps1|ENSMUSG00000071497.3|nuclear transport factor 2, pseudogene 1
mm10_v2_chr7_+_101896340_101896431	0.468044	Nkx2-3	ENSMUST00000035395.7|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000106973.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000144207.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chrX_-_48208870_48208881	0.455927	Nkx2-3	ENSMUST00000088935.3|Zdhhc9|ENSMUSG00000036985.6|zinc finger, DHHC domain containing 9
mm10_v2_chr2_+_3114220_3114225	0.454971	Nkx2-3	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr6_-_99044414_99044459	0.453719	Nkx2-3	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr1_-_84839304_84839321	0.449043	Nkx2-3	ENSMUST00000027421.6|Trip12|ENSMUSG00000026219.8|thyroid hormone receptor interactor 12
mm10_v2_chr1_-_193370225_193370255	0.446393	Nkx2-3	ENSMUST00000169907.1|Camk1g|ENSMUSG00000016179.5|calcium/calmodulin-dependent protein kinase I gamma
mm10_v2_chr2_-_174346712_174346712	0.438316	Nkx2-3	ENSMUST00000168292.1|Gm20721|ENSMUSG00000090625.1|predicted gene, 20721
mm10_v2_chr5_-_72587544_72587555	0.432464	Nkx2-3	ENSMUST00000031124.4|Gm5868|ENSMUSG00000060204.4|predicted gene 5868
mm10_v2_chr7_-_37772868_37772891	0.428563	Nkx2-3	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr1_-_37496095_37496156	0.420376	Nkx2-3	ENSMUST00000148047.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A 	ENSMUST00000143636.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr8_-_8639363_8639363	0.418461	Nkx2-3	ENSMUST00000152698.1|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr3_+_55461758_55461961	0.407104	Nkx2-3	ENSMUST00000070418.4|Dclk1|ENSMUSG00000027797.9|doublecortin-like kinase 1
mm10_v2_chr8_-_22694061_22694081	0.404704	Nkx2-3	ENSMUST00000131767.1|Ikbkb|ENSMUSG00000031537.9|inhibitor of kappaB kinase beta
mm10_v2_chr1_-_162859919_162859973	0.402847	Nkx2-3	ENSMUST00000134098.1|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1 	ENSMUST00000111518.1|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1
mm10_v2_chr18_-_56975333_56975376	0.401467	Nkx2-3	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chr1_-_193370260_193370297	0.400815	Nkx2-3	ENSMUST00000016323.4|Camk1g|ENSMUSG00000016179.5|calcium/calmodulin-dependent protein kinase I gamma
mm10_v2_chr3_+_102734496_102734530	0.390265	Nkx2-3	ENSMUST00000029451.5|Tspan2|ENSMUSG00000027858.7|tetraspanin 2
mm10_v2_chr1_-_175688353_175688353	0.389197	Nkx2-3	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr1_+_66700831_66700875	0.387024	Nkx2-3	ENSMUST00000027157.3|Rpe|ENSMUSG00000026005.9|ribulose-5-phosphate-3-epimerase 	ENSMUST00000113995.1|Rpe|ENSMUSG00000026005.9|ribulose-5-phosphate-3-epimerase
mm10_v2_chr7_-_37773555_37773641	0.383089	Nkx2-3	ENSMUST00000176534.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr9_+_34486125_34486126	0.376604	Nkx2-3	ENSMUST00000183580.1|RP24-225I21.1|ENSMUSG00000098841.1|RP24-225I21.1	ENSMUST00000115148.2|Kirrel3|ENSMUSG00000032036.9|kin of IRRE like 3 (Drosophila)
mm10_v2_chr19_-_14597983_14598016	0.375703	Nkx2-3	ENSMUST00000052011.7|Tle4|ENSMUSG00000024642.10|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm10_v2_chr3_-_154330543_154330576	0.375047	Nkx2-3	ENSMUST00000184966.1|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8 	ENSMUST00000177846.2|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8
mm10_v2_chr9_+_52047150_52047163	0.374138	Nkx2-3	ENSMUST00000163153.1|Rdx|ENSMUSG00000032050.10|radixin
mm10_v2_chr19_-_14598031_14598088	0.368862	Nkx2-3	ENSMUST00000167776.2|Tle4|ENSMUSG00000024642.10|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm10_v2_chr11_+_29718563_29718753	0.358853	Nkx2-3	ENSMUST00000060992.5|Rtn4|ENSMUSG00000020458.10|reticulon 4
mm10_v2_chr5_-_73191848_73191922	0.35605	Nkx2-3	ENSMUST00000176910.1|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr9_+_106368594_106368640	0.35357	Nkx2-3	ENSMUST00000172306.2|Dusp7|ENSMUSG00000053716.7|dual specificity phosphatase 7
mm10_v2_chr1_+_151571373_151571471	0.353482	Nkx2-3	ENSMUST00000148810.1|Fam129a|ENSMUSG00000026483.7|family with sequence similarity 129, member A
mm10_v2_chr1_+_72284367_72284419	0.3531	Nkx2-3	ENSMUST00000027380.5|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169 	ENSMUST00000141783.1|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169
mm10_v2_chr11_+_94328242_94328261	0.352422	Nkx2-3	ENSMUST00000021227.5|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr5_-_98566762_98566762	0.346815	Nkx2-3	ENSMUST00000086912.4|1700010H22Rik|ENSMUSG00000067101.4|RIKEN cDNA 1700010H22 gene
mm10_v2_chr13_-_23622502_23622563	0.34596	Nkx2-3	ENSMUST00000062045.2|Hist1h1e|ENSMUSG00000051627.2|histone cluster 1, H1e
mm10_v2_chr2_+_83644435_83644490	0.34224	Nkx2-3	ENSMUST00000081591.6|Zc3h15|ENSMUSG00000027091.8|zinc finger CCCH-type containing 15
mm10_v2_chr13_+_44121167_44121322	0.333329	Nkx2-3	ENSMUST00000163056.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083 	ENSMUST00000159595.1|Gm5083|ENSMUSG00000089815.1|predicted gene 5083
mm10_v2_chr11_+_94327984_94328029	0.329859	Nkx2-3	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr11_+_120232921_120232952	0.326582	Nkx2-3	ENSMUST00000122148.1|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1 	ENSMUST00000044985.7|Bahcc1|ENSMUSG00000039741.9|BAH domain and coiled-coil containing 1
mm10_v2_chr2_-_65529275_65529404	0.324859	Nkx2-3	ENSMUST00000126837.1|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr10_+_24149291_24149376	0.312601	Nkx2-3	ENSMUST00000020174.5|Stx7|ENSMUSG00000019998.5|syntaxin 7
mm10_v2_chr4_-_59783800_59783876	0.307951	Nkx2-3	ENSMUST00000107526.1|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein 	ENSMUST00000095063.4|Inip|ENSMUSG00000038544.8|INTS3 and NABP interacting protein
mm10_v2_chr15_-_100424092_100424173	0.306835	Nkx2-3	ENSMUST00000154676.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr6_+_83165920_83166004	0.305025	Nkx2-3	ENSMUST00000077407.5|Dctn1|ENSMUSG00000031865.9|dynactin 1 	ENSMUST00000113913.1|Dctn1|ENSMUSG00000031865.9|dynactin 1 	ENSMUST00000130212.1|Dctn1|ENSMUSG00000031865.9|dynactin 1
mm10_v2_chr8_-_84662841_84662859	0.303901	Nkx2-3	ENSMUST00000060427.4|Ier2|ENSMUSG00000053560.4|immediate early response 2
mm10_v2_chr10_+_94575257_94575295	0.299533	Nkx2-3	ENSMUST00000121471.1|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr2_+_83724397_83724555	0.299141	Nkx2-3	ENSMUST00000028499.4|Itgav|ENSMUSG00000027087.5|integrin alpha V 	ENSMUST00000141725.1|Itgav|ENSMUSG00000027087.5|integrin alpha V 	ENSMUST00000111740.2|Itgav|ENSMUSG00000027087.5|integrin alpha V
mm10_v2_chrX_-_136741155_136741352	0.298141	Nkx2-3	ENSMUST00000166930.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000113095.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000155207.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000080411.6|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2 	ENSMUST00000169418.1|Morf4l2|ENSMUSG00000031422.10|mortality factor 4 like 2
mm10_v2_chr7_-_73541738_73541758	0.291365	Nkx2-3	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr3_+_51415986_51416044	0.284909	Nkx2-3	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chrX_-_95658392_95658412	0.282602	Nkx2-3	ENSMUST00000120620.1|Zc4h2|ENSMUSG00000035062.7|zinc finger, C4H2 domain containing
mm10_v2_chr3_+_67892189_67892226	0.279034	Nkx2-3	ENSMUST00000063263.3|Iqcj|ENSMUSG00000051777.4|IQ motif containing J
mm10_v2_chrX_-_94123359_94123412	0.273691	Nkx2-3	ENSMUST00000137853.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked 	ENSMUST00000088102.5|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked 	ENSMUST00000113927.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked
mm10_v2_chr11_+_20543307_20543336	0.272106	Nkx2-3	ENSMUST00000093292.4|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr5_-_25100624_25100657	0.268159	Nkx2-3	ENSMUST00000030784.7|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr4_-_133967235_133967284	0.267154	Nkx2-3	ENSMUST00000123234.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr4_+_140700487_140700541	0.265815	Nkx2-3	ENSMUST00000071169.2|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr5_-_116288944_116288977	0.262458	Nkx2-3	ENSMUST00000086483.3|Ccdc60|ENSMUSG00000043913.8|coiled-coil domain containing 60
mm10_v2_chr7_+_123123870_123123901	0.259423	Nkx2-3	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr5_-_122614445_122614544	0.239669	Nkx2-3	ENSMUST00000127220.1|Ift81|ENSMUSG00000029469.8|intraflagellar transport 81 	ENSMUST00000031426.7|Ift81|ENSMUSG00000029469.8|intraflagellar transport 81
mm10_v2_chr18_+_61639542_61639653	0.236585	Nkx2-3	ENSMUST00000183083.1|Gm20748|ENSMUSG00000098098.1|predicted gene, 20748 	ENSMUST00000183087.1|Gm20748|ENSMUSG00000098098.1|predicted gene, 20748
mm10_v2_chr2_+_23069210_23069327	0.231495	Nkx2-3	ENSMUST00000155602.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chrX_-_95658379_95658390	0.229916	Nkx2-3	ENSMUST00000119640.1|Zc4h2|ENSMUSG00000035062.7|zinc finger, C4H2 domain containing
mm10_v2_chr16_-_5013505_5013558	0.229282	Nkx2-3	ENSMUST00000023191.10|Rogdi|ENSMUSG00000022540.10|rogdi homolog (Drosophila) 	ENSMUST00000090453.5|Rogdi|ENSMUSG00000022540.10|rogdi homolog (Drosophila)
mm10_v2_chr5_-_72168142_72168199	0.223522	Nkx2-3	ENSMUST00000013693.6|Commd8|ENSMUSG00000029213.7|COMM domain containing 8
mm10_v2_chr15_-_93336800_93336852	0.22199	Nkx2-3	ENSMUST00000080299.6|Yaf2|ENSMUSG00000022634.9|YY1 associated factor 2
mm10_v2_chrX_-_16911774_16911774	0.220684	Nkx2-3	ENSMUST00000040134.7|Ndp|ENSMUSG00000040138.7|Norrie disease (pseudoglioma) (human)
mm10_v2_chr5_+_150756295_150756320	0.218762	Nkx2-3	ENSMUST00000110486.1|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm10_v2_chr12_+_100110148_100110193	0.218223	Nkx2-3	ENSMUST00000021595.8|Psmc1|ENSMUSG00000021178.8|protease (prosome, macropain) 26S subunit, ATPase 1
mm10_v2_chr14_-_27508460_27508503	0.217704	Nkx2-3	ENSMUST00000050480.6|Ccdc66|ENSMUSG00000046753.9|coiled-coil domain containing 66
mm10_v2_chr12_+_52516077_52516077	0.215953	Nkx2-3	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr2_-_79456750_79456761	0.214453	Nkx2-3	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr9_+_78051938_78051958	0.21109	Nkx2-3	ENSMUST00000024104.7|Gcm1|ENSMUSG00000023333.7|glial cells missing homolog 1 (Drosophila)
mm10_v2_chr10_+_69925954_69926133	0.209613	Nkx2-3	ENSMUST00000181974.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182795.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000182437.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr4_-_131937165_131937211	0.208017	Nkx2-3	ENSMUST00000155990.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr1_+_40465976_40466006	0.207774	Nkx2-3	ENSMUST00000108044.2|Il18r1|ENSMUSG00000026070.9|interleukin 18 receptor 1 	ENSMUST00000087983.2|Il18r1|ENSMUSG00000026070.9|interleukin 18 receptor 1
mm10_v2_chr14_-_52237791_52237791	0.205078	Nkx2-3	ENSMUST00000149975.1|Chd8|ENSMUSG00000053754.7|chromodomain helicase DNA binding protein 8
mm10_v2_chr3_+_10088173_10088173	0.200877	Nkx2-3	ENSMUST00000061419.7|Gm9833|ENSMUSG00000049230.7|predicted gene 9833
mm10_v2_chr3_+_32515295_32515295	0.197549	Nkx2-3	ENSMUST00000029203.7|Zfp639|ENSMUSG00000027667.8|zinc finger protein 639
mm10_v2_chr2_-_67194695_67194736	0.195898	Nkx2-3	ENSMUST00000147939.1|Gm13598|ENSMUSG00000086908.1|predicted gene 13598
mm10_v2_chr9_+_74953053_74953091	0.19502	Nkx2-3	ENSMUST00000170846.1|Fam214a|ENSMUSG00000034858.9|family with sequence similarity 214, member A
mm10_v2_chr5_+_88720855_88720876	0.19482	Nkx2-3	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr18_-_31911903_31911903	0.192701	Nkx2-3	ENSMUST00000054984.6|Sft2d3|ENSMUSG00000044982.6|SFT2 domain containing 3
mm10_v2_chr12_-_57546121_57546141	0.19221	Nkx2-3	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr13_+_23555023_23555039	0.192209	Nkx2-3	ENSMUST00000045301.6|Hist1h1d|ENSMUSG00000052565.5|histone cluster 1, H1d
mm10_v2_chr7_+_101896817_101896961	0.192078	Nkx2-3	ENSMUST00000143835.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr19_-_46969474_46969555	0.18789	Nkx2-3	ENSMUST00000086961.7|Nt5c2|ENSMUSG00000025041.10|5'-nucleotidase, cytosolic II
mm10_v2_chr15_-_100424208_100424219	0.181767	Nkx2-3	ENSMUST00000154331.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr17_+_27839974_27840119	0.179877	Nkx2-3	ENSMUST00000071006.7|Snrpc|ENSMUSG00000024217.9|U1 small nuclear ribonucleoprotein C
mm10_v2_chr11_+_24078173_24078219	0.177964	Nkx2-3	ENSMUST00000109514.1|Bcl11a|ENSMUSG00000000861.9|B cell CLL/lymphoma 11A (zinc finger protein)
mm10_v2_chr9_+_14500611_14500620	0.172915	Nkx2-3	ENSMUST00000004200.8|Cwc15|ENSMUSG00000004096.8|CWC15 homolog (S. cerevisiae)
mm10_v2_chr1_+_132298606_132298631	0.171704	Nkx2-3	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chrX_-_95658416_95658509	0.169698	Nkx2-3	ENSMUST00000044382.6|Zc4h2|ENSMUSG00000035062.7|zinc finger, C4H2 domain containing
mm10_v2_chrX_-_143933204_143933311	0.169078	Nkx2-3	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr7_-_5014645_5014697	0.167341	Nkx2-3	ENSMUST00000165320.1|Fiz1|ENSMUSG00000061374.7|Flt3 interacting zinc finger protein 1
mm10_v2_chr15_-_98934522_98934586	0.165558	Nkx2-3	ENSMUST00000077577.7|Tuba1b|ENSMUSG00000023004.8|tubulin, alpha 1B
mm10_v2_chr17_+_28692568_28692616	0.164104	Nkx2-3	ENSMUST00000114752.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14
mm10_v2_chrX_+_101429555_101429708	0.162713	Nkx2-3	ENSMUST00000033673.6|Nono|ENSMUSG00000031311.11|non-POU-domain-containing, octamer binding protein
mm10_v2_chr5_+_123907175_123907292	0.156937	Nkx2-3	ENSMUST00000023869.8|Denr|ENSMUSG00000023106.9|density-regulated protein
mm10_v2_chr19_+_55894508_55894534	0.151851	Nkx2-3	ENSMUST00000142291.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr1_-_45890078_45890078	0.151127	Nkx2-3	ENSMUST00000183590.1|Gm5269|ENSMUSG00000098549.1|predicted gene 5269
mm10_v2_chr6_-_120038647_120038699	0.147433	Nkx2-3	ENSMUST00000088646.5|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000177761.1|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000088644.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000060043.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr8_-_31918203_31918368	0.145234	Nkx2-3	ENSMUST00000073884.4|Nrg1|ENSMUSG00000062991.6|neuregulin 1
mm10_v2_chr12_-_56535047_56535106	0.143698	Nkx2-3	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr4_-_45408646_45408768	0.142282	Nkx2-3	ENSMUST00000153904.1|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51 	ENSMUST00000132815.2|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51 	ENSMUST00000107796.1|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51 	ENSMUST00000116341.3|Slc25a51|ENSMUSG00000045973.12|solute carrier family 25, member 51
mm10_v2_chr10_-_19907645_19907689	0.141586	Nkx2-3	ENSMUST00000166511.1|Pex7|ENSMUSG00000020003.9|peroxisomal biogenesis factor 7 	ENSMUST00000020182.8|Pex7|ENSMUSG00000020003.9|peroxisomal biogenesis factor 7
mm10_v2_chr4_-_91376490_91376502	0.140193	Nkx2-3	ENSMUST00000107124.3|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr6_+_29853746_29853790	0.139552	Nkx2-3	ENSMUST00000064872.6|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000152581.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000176265.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000154079.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr13_+_38204928_38204962	0.137153	Nkx2-3	ENSMUST00000091641.5|Snrnp48|ENSMUSG00000021431.8|small nuclear ribonucleoprotein 48 (U11/U12) 	ENSMUST00000178564.1|Snrnp48|ENSMUSG00000021431.8|small nuclear ribonucleoprotein 48 (U11/U12)
mm10_v2_chr6_-_99266494_99266540	0.134378	Nkx2-3	ENSMUST00000113326.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr18_-_43477764_43477836	0.131907	Nkx2-3	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr11_+_94044111_94044121	0.129119	Nkx2-3	ENSMUST00000132079.1|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr4_+_48663502_48663525	0.129074	Nkx2-3	ENSMUST00000030033.4|Murc|ENSMUSG00000028348.7|muscle-related coiled-coil protein
mm10_v2_chr6_+_29859662_29859685	0.129018	Nkx2-3	ENSMUST00000128927.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chrX_-_143933089_143933142	0.128985	Nkx2-3	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr14_+_25607797_25607838	0.12774	Nkx2-3	ENSMUST00000160229.1|Zmiz1|ENSMUSG00000007817.8|zinc finger, MIZ-type containing 1
mm10_v2_chr4_+_140701466_140701509	0.126528	Nkx2-3	ENSMUST00000038893.5|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2 	ENSMUST00000138808.1|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr6_-_83121385_83121559	0.126395	Nkx2-3	ENSMUST00000146328.1|Wbp1|ENSMUSG00000030035.8|WW domain binding protein 1 	ENSMUST00000113936.3|Wbp1|ENSMUSG00000030035.8|WW domain binding protein 1 	ENSMUST00000032111.4|Wbp1|ENSMUSG00000030035.8|WW domain binding protein 1
mm10_v2_chr11_+_85312164_85312180	0.125308	Nkx2-3	ENSMUST00000127717.1|Ppm1d|ENSMUSG00000020525.11|protein phosphatase 1D magnesium-dependent, delta isoform
mm10_v2_chr5_+_15516489_15516489	0.124593	Nkx2-3	ENSMUST00000178227.1|Gm21847|ENSMUSG00000094230.1|predicted gene, 21847
mm10_v2_chr7_-_116198487_116198561	0.122784	Nkx2-3	ENSMUST00000181981.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr14_+_79515618_79515694	0.122255	Nkx2-3	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr6_+_29859686_29859710	0.119039	Nkx2-3	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr7_+_92819892_92819920	0.116024	Nkx2-3	ENSMUST00000107180.1|Rab30|ENSMUSG00000030643.7|RAB30, member RAS oncogene family 	ENSMUST00000107179.1|Rab30|ENSMUSG00000030643.7|RAB30, member RAS oncogene family
mm10_v2_chr15_+_25773985_25774042	0.115081	Nkx2-3	ENSMUST00000125667.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr2_+_61593125_61593175	0.115027	Nkx2-3	ENSMUST00000112494.1|Tank|ENSMUSG00000064289.9|TRAF family member-associated Nf-kappa B activator
mm10_v2_chr1_+_137928100_137928170	0.115021	Nkx2-3	ENSMUST00000054333.2|A130050O07Rik|ENSMUSG00000051480.2|RIKEN cDNA A130050O07 gene
mm10_v2_chr7_+_131560363_131560398	0.114491	Nkx2-3	ENSMUST00000084502.5|Bub3|ENSMUSG00000066979.5|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm10_v2_chr13_-_53473074_53473074	0.11419	Nkx2-3	ENSMUST00000021922.8|Msx2|ENSMUSG00000021469.8|msh homeobox 2
mm10_v2_chr2_+_80617045_80617290	0.113305	Nkx2-3	ENSMUST00000028384.4|Dusp19|ENSMUSG00000027001.4|dual specificity phosphatase 19
mm10_v2_chr2_-_147186389_147186413	0.10958	Nkx2-3	ENSMUST00000109970.3|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2 	ENSMUST00000067075.5|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2
mm10_v2_chr2_+_170511418_170511560	0.105909	Nkx2-3	ENSMUST00000136839.1|Pfdn4|ENSMUSG00000052033.7|prefoldin 4 	ENSMUST00000109148.1|Pfdn4|ENSMUSG00000052033.7|prefoldin 4 	ENSMUST00000170167.1|Pfdn4|ENSMUSG00000052033.7|prefoldin 4
mm10_v2_chr11_-_79962374_79962398	0.105842	Nkx2-3	ENSMUST00000108241.1|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000043152.5|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr3_+_87906842_87906856	0.104662	Nkx2-3	ENSMUST00000159492.1|Hdgf|ENSMUSG00000004897.10|hepatoma-derived growth factor
mm10_v2_chr6_-_138426735_138426816	0.1043	Nkx2-3	ENSMUST00000162932.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr4_+_141115660_141115660	0.1	Nkx2-3	ENSMUST00000181450.1|4921514A10Rik|ENSMUSG00000097620.1|RIKEN cDNA 4921514A10 gene
mm10_v2_chr16_-_19706365_19706399	0.099665	Nkx2-3	ENSMUST00000081880.5|Lamp3|ENSMUSG00000041247.7|lysosomal-associated membrane protein 3
mm10_v2_chr2_-_32424005_32424029	0.0973472	Nkx2-3	ENSMUST00000113307.2|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm10_v2_chr3_-_87885558_87885608	0.0965801	Nkx2-3	ENSMUST00000005015.8|Prcc|ENSMUSG00000004895.8|papillary renal cell carcinoma (translocation-associated)
mm10_v2_chr11_-_93965957_93966043	0.0935626	Nkx2-3	ENSMUST00000021220.3|Nme1|ENSMUSG00000037601.5|NME/NM23 nucleoside diphosphate kinase 1
mm10_v2_chr10_-_19907545_19907627	0.0903232	Nkx2-3	ENSMUST00000134220.1|Pex7|ENSMUSG00000020003.9|peroxisomal biogenesis factor 7
mm10_v2_chr13_-_75943812_75943950	0.0885223	Nkx2-3	ENSMUST00000022078.5|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3 	ENSMUST00000109606.1|Rhobtb3|ENSMUSG00000021589.6|Rho-related BTB domain containing 3
mm10_v2_chr5_+_42067960_42067960	0.087852	Nkx2-3	ENSMUST00000087332.4|Gm16223|ENSMUSG00000067285.4|predicted gene 16223
mm10_v2_chr8_+_85432686_85432686	0.0832927	Nkx2-3	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr4_-_91376433_91376477	0.0813257	Nkx2-3	ENSMUST00000107109.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107111.2|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107120.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr11_-_116189542_116189575	0.0690488	Nkx2-3	ENSMUST00000148601.1|Acox1|ENSMUSG00000020777.10|acyl-Coenzyme A oxidase 1, palmitoyl
mm10_v2_chr9_+_72806874_72806874	0.0673795	Nkx2-3	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chr3_-_79145875_79145930	0.0656397	Nkx2-3	ENSMUST00000118340.1|Rapgef2|ENSMUSG00000062232.8|Rap guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr19_-_59170978_59170978	0.0651422	Nkx2-3	ENSMUST00000172821.2|Vax1|ENSMUSG00000006270.6|ventral anterior homeobox containing gene 1
mm10_v2_chr6_+_37870786_37870882	0.0645828	Nkx2-3	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr5_+_57718021_57718104	0.0594438	Nkx2-3	ENSMUST00000094783.3|Pcdh7|ENSMUSG00000029108.8|protocadherin 7 	ENSMUST00000068110.7|Pcdh7|ENSMUSG00000029108.8|protocadherin 7
mm10_v2_chr1_+_79776018_79776132	0.0593346	Nkx2-3	ENSMUST00000027464.8|Mrpl44|ENSMUSG00000026248.8|mitochondrial ribosomal protein L44
mm10_v2_chr7_+_25228687_25228687	0.059038	Nkx2-3	ENSMUST00000169914.1|9130221H12Rik|ENSMUSG00000090330.1|RIKEN cDNA 9130221H12 gene
mm10_v2_chr1_-_24612700_24612700	0.0553007	Nkx2-3	ENSMUST00000088336.1|Gm10222|ENSMUSG00000067736.1|predicted gene 10222
mm10_v2_chr10_+_102158858_102158889	0.0543766	Nkx2-3	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr19_-_44552831_44552831	0.049951	Nkx2-3	ENSMUST00000166808.1|Gm20538|ENSMUSG00000091471.1|predicted gene 20538
mm10_v2_chr14_+_4198185_4198185	0.0380823	Nkx2-3	ENSMUST00000180184.1|Gm2974|ENSMUSG00000079391.4|predicted gene 2974
mm10_v2_chrM_+_5319_5333	0.0358807	Nkx2-3	ENSMUST00000082402.1|mt-Co1|ENSMUSG00000064351.1|mitochondrially encoded cytochrome c oxidase I
mm10_v2_chr1_-_126830786_126830799	0.0350981	Nkx2-3	ENSMUST00000162646.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chrM_+_7005_7022	0.0349342	Nkx2-3	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr12_+_21286297_21286451	0.0348489	Nkx2-3	ENSMUST00000067284.8|Cpsf3|ENSMUSG00000054309.8|cleavage and polyadenylation specificity factor 3
mm10_v2_chr4_+_54947976_54948054	0.0303827	Nkx2-3	ENSMUST00000098070.3|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chrM_+_7759_7927	0.0303263	Nkx2-3	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr13_+_93308006_93308034	0.0289978	Nkx2-3	ENSMUST00000079086.6|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr18_-_46741544_46741584	0.0233674	Nkx2-3	ENSMUST00000035648.4|Atg12|ENSMUSG00000032905.4|autophagy related 12
mm10_v2_chr16_-_16359016_16359040	0.0220002	Nkx2-3	ENSMUST00000023477.7|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000096229.3|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like 	ENSMUST00000115749.1|Dnm1l|ENSMUSG00000022789.8|dynamin 1-like
mm10_v2_chr1_-_162859684_162859735	0.021289	Nkx2-3	ENSMUST00000131058.1|Fmo1|ENSMUSG00000040181.8|flavin containing monooxygenase 1
mm10_v2_chr18_-_66022580_66022600	0.0176889	Nkx2-3	ENSMUST00000143990.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr6_+_17636983_17637014	0.0173579	Nkx2-3	ENSMUST00000015877.7|Capza2|ENSMUSG00000015733.7|capping protein (actin filament) muscle Z-line, alpha 2
mm10_v2_chr1_-_63176653_63176822	0.0161041	Nkx2-3	ENSMUST00000027111.8|Ndufs1|ENSMUSG00000025968.10|NADH dehydrogenase (ubiquinone) Fe-S protein 1 	ENSMUST00000168099.2|Ndufs1|ENSMUSG00000025968.10|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm10_v2_chr12_-_56536895_56536937	0.0161026	Nkx2-3	ENSMUST00000001536.8|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr6_-_57535422_57535447	0.0116442	Nkx2-3	ENSMUST00000042766.3|Ppm1k|ENSMUSG00000037826.3|protein phosphatase 1K (PP2C domain containing)
mm10_v2_chr9_+_54980880_54980880	0.0101693	Nkx2-3	ENSMUST00000093844.3|Chrna5|ENSMUSG00000035594.9|cholinergic receptor, nicotinic, alpha polypeptide 5
mm10_v2_chr1_-_126830632_126830778	0.00942916	Nkx2-3	ENSMUST00000112583.1|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5 	ENSMUST00000094609.3|Nckap5|ENSMUSG00000049690.9|NCK-associated protein 5
mm10_v2_chr6_+_134981998_134982002	0.00876175	Nkx2-3	ENSMUST00000167323.1|Apold1|ENSMUSG00000090698.1|apolipoprotein L domain containing 1
mm10_v2_chr10_+_56377300_56377338	0.00853653	Nkx2-3	ENSMUST00000068581.7|Gja1|ENSMUSG00000050953.9|gap junction protein, alpha 1
mm10_v2_chr3_-_154328634_154328663	0.005993	Nkx2-3	ENSMUST00000167744.1|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8
mm10_v2_chr19_+_11912389_11912475	0.00502683	Nkx2-3	ENSMUST00000061618.7|Patl1|ENSMUSG00000046139.7|protein associated with topoisomerase II homolog 1 (yeast)
mm10_v2_chr15_+_81744848_81744848	0.00496716	Nkx2-3	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr9_-_53248106_53248117	0.00461327	Nkx2-3	ENSMUST00000065630.6|Ddx10|ENSMUSG00000053289.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
mm10_v2_chrX_-_74249819_74249840	0.00414656	Nkx2-3	ENSMUST00000114299.1|Flna|ENSMUSG00000031328.9|filamin, alpha
mm10_v2_chr11_+_94044194_94044238	0.00276251	Nkx2-3	ENSMUST00000092777.4|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9 	ENSMUST00000075695.6|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr11_+_59306920_59306935	0.000909728	Nkx2-3	ENSMUST00000000128.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A 	ENSMUST00000108783.3|Wnt9a|ENSMUSG00000000126.5|wingless-type MMTV integration site 9A
mm10_v2_chr3_-_126998408_126998463	0.000456462	Nkx2-3	ENSMUST00000182764.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000044443.8|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
