mm10_v2_chr2_+_180499893_180499976	5.93756	Zic4	ENSMUST00000029084.2|Ntsr1|ENSMUSG00000027568.3|neurotensin receptor 1
mm10_v2_chr4_+_141368116_141368220	3.51391	Zic4	ENSMUST00000006380.4|Fam131c|ENSMUSG00000006218.4|family with sequence similarity 131, member C
mm10_v2_chr19_-_12501996_12502152	3.43623	Zic4	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chr9_-_29412204_29412277	3.39904	Zic4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr17_-_29237759_29237827	3.34612	Zic4	ENSMUST00000137727.1|Cpne5|ENSMUSG00000024008.9|copine V 	ENSMUST00000024805.7|Cpne5|ENSMUSG00000024008.9|copine V
mm10_v2_chr4_-_72200833_72200928	2.93846	Zic4	ENSMUST00000102848.2|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000072695.6|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000107337.1|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000074216.7|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl)
mm10_v2_chr19_+_4099998_4100083	2.93106	Zic4	ENSMUST00000049658.7|Pitpnm1|ENSMUSG00000024851.7|phosphatidylinositol transfer protein, membrane-associated 1
mm10_v2_chr5_-_139325616_139325627	2.83461	Zic4	ENSMUST00000110865.1|Adap1|ENSMUSG00000056413.10|ArfGAP with dual PH domains 1
mm10_v2_chr4_+_104367549_104367592	2.73406	Zic4	ENSMUST00000106830.2|Dab1|ENSMUSG00000028519.10|disabled 1
mm10_v2_chr19_+_47178820_47178997	2.70256	Zic4	ENSMUST00000111808.3|Neurl1a|ENSMUSG00000006435.9|neuralized homolog 1A (Drosophila)
mm10_v2_chr4_+_152338619_152338709	2.69576	Zic4	ENSMUST00000030775.5|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5 	ENSMUST00000164662.1|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr5_+_139543889_139543904	2.68948	Zic4	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr4_+_152338887_152338967	2.52947	Zic4	ENSMUST00000005175.4|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr17_+_46297917_46298083	2.48243	Zic4	ENSMUST00000166617.1|Dlk2|ENSMUSG00000047428.8|delta-like 2 homolog (Drosophila) 	ENSMUST00000170271.1|Dlk2|ENSMUSG00000047428.8|delta-like 2 homolog (Drosophila)
mm10_v2_chr7_-_47133684_47133720	2.15129	Zic4	ENSMUST00000102626.1|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr7_-_47133395_47133437	2.14166	Zic4	ENSMUST00000107617.1|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr12_+_112146187_112146222	2.07724	Zic4	ENSMUST00000128402.2|Kif26a|ENSMUSG00000021294.7|kinesin family member 26A
mm10_v2_chrY_+_897782_897800	1.94182	Zic4	ENSMUST00000055032.7|Kdm5d|ENSMUSG00000056673.8|lysine (K)-specific demethylase 5D
mm10_v2_chr1_+_91179822_91179822	1.84305	Zic4	ENSMUST00000097648.4|Ramp1|ENSMUSG00000034353.8|receptor (calcitonin) activity modifying protein 1 	ENSMUST00000165855.1|Ramp1|ENSMUSG00000034353.8|receptor (calcitonin) activity modifying protein 1
mm10_v2_chrX_-_107403295_107403404	1.8061	Zic4	ENSMUST00000033591.5|Itm2a|ENSMUSG00000031239.5|integral membrane protein 2A
mm10_v2_chr9_-_107710475_107710475	1.7909	Zic4	ENSMUST00000080560.3|Sema3f|ENSMUSG00000034684.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm10_v2_chr2_-_152951688_152951700	1.76951	Zic4	ENSMUST00000109811.3|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr11_+_98741871_98741894	1.62131	Zic4	ENSMUST00000103139.4|Thra|ENSMUSG00000058756.7|thyroid hormone receptor alpha
mm10_v2_chr2_-_152951547_152951608	1.61681	Zic4	ENSMUST00000037715.6|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr2_+_164960809_164960833	1.61516	Zic4	ENSMUST00000124372.1|Slc12a5|ENSMUSG00000017740.10|solute carrier family 12, member 5
mm10_v2_chr11_+_98741805_98741816	1.59223	Zic4	ENSMUST00000064187.5|Thra|ENSMUSG00000058756.7|thyroid hormone receptor alpha
mm10_v2_chr17_-_71310952_71310969	1.54997	Zic4	ENSMUST00000024849.9|Emilin2|ENSMUSG00000024053.10|elastin microfibril interfacer 2
mm10_v2_chr17_+_79051906_79051906	1.54756	Zic4	ENSMUST00000040789.4|Qpct|ENSMUSG00000024084.7|glutaminyl-peptide cyclotransferase (glutaminyl cyclase)
mm10_v2_chr2_-_152951456_152951540	1.52618	Zic4	ENSMUST00000123121.2|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chrX_-_49797700_49797755	1.3905	Zic4	ENSMUST00000033442.7|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1 	ENSMUST00000114891.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chr6_+_99692679_99692679	1.36581	Zic4	ENSMUST00000101122.1|Gpr27|ENSMUSG00000072875.1|G protein-coupled receptor 27
mm10_v2_chr6_-_35308110_35308136	1.36096	Zic4	ENSMUST00000031868.4|Slc13a4|ENSMUSG00000029843.4|solute carrier family 13 (sodium/sulfate symporters), member 4
mm10_v2_chr19_+_48206025_48206163	1.35324	Zic4	ENSMUST00000078880.5|Sorcs3|ENSMUSG00000063434.5|sortilin-related VPS10 domain containing receptor 3
mm10_v2_chr3_-_8964037_8964101	1.30869	Zic4	ENSMUST00000091354.5|Tpd52|ENSMUSG00000027506.9|tumor protein D52 	ENSMUST00000094381.4|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr6_-_59426279_59426345	1.28188	Zic4	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chr11_-_69920892_69920966	1.21035	Zic4	ENSMUST00000152589.1|Eif5a|ENSMUSG00000078812.4|eukaryotic translation initiation factor 5A 	ENSMUST00000108612.1|Eif5a|ENSMUSG00000078812.4|eukaryotic translation initiation factor 5A 	ENSMUST00000108611.1|Eif5a|ENSMUSG00000078812.4|eukaryotic translation initiation factor 5A
mm10_v2_chr6_+_65671590_65671618	1.12978	Zic4	ENSMUST00000054351.4|Ndnf|ENSMUSG00000049001.4|neuron-derived neurotrophic factor
mm10_v2_chr11_+_5861886_5861966	1.11557	Zic4	ENSMUST00000102923.3|Aebp1|ENSMUSG00000020473.7|AE binding protein 1
mm10_v2_chr7_-_143460989_143461050	1.11196	Zic4	ENSMUST00000167912.1|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57) 	ENSMUST00000037287.6|Cdkn1c|ENSMUSG00000037664.6|cyclin-dependent kinase inhibitor 1C (P57)
mm10_v2_chr4_-_133602168_133602168	1.0807	Zic4	ENSMUST00000057311.3|Sfn|ENSMUSG00000047281.3|stratifin
mm10_v2_chr5_-_113310729_113310788	1.07444	Zic4	ENSMUST00000112325.1|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1 	ENSMUST00000048112.6|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1
mm10_v2_chr9_-_35558522_35558548	1.06265	Zic4	ENSMUST00000034612.5|Ddx25|ENSMUSG00000032101.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25
mm10_v2_chr3_-_110142996_110143010	1.0338	Zic4	ENSMUST00000156177.2|Ntng1|ENSMUSG00000059857.9|netrin G1
mm10_v2_chr2_+_85136355_85136371	1.03064	Zic4	ENSMUST00000057019.7|Aplnr|ENSMUSG00000044338.8|apelin receptor
mm10_v2_chr5_-_113310697_113310727	0.976928	Zic4	ENSMUST00000154248.1|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1
mm10_v2_chr7_-_17056669_17056696	0.97232	Zic4	ENSMUST00000037762.4|Hif3a|ENSMUSG00000004328.9|hypoxia inducible factor 3, alpha subunit
mm10_v2_chr11_-_116335384_116335399	0.965354	Zic4	ENSMUST00000036215.7|Foxj1|ENSMUSG00000034227.7|forkhead box J1
mm10_v2_chr11_+_24076529_24076563	0.936384	Zic4	ENSMUST00000148087.1|Gm12063|ENSMUSG00000085167.1|predicted gene 12063
mm10_v2_chr3_-_107986408_107986466	0.906987	Zic4	ENSMUST00000012348.2|Gstm2|ENSMUSG00000040562.6|glutathione S-transferase, mu 2
mm10_v2_chr4_-_57143437_57143624	0.905332	Zic4	ENSMUST00000095076.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b 	ENSMUST00000030142.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b
mm10_v2_chr11_+_93099284_93099331	0.86975	Zic4	ENSMUST00000092780.3|Car10|ENSMUSG00000056158.8|carbonic anhydrase 10 	ENSMUST00000107863.2|Car10|ENSMUSG00000056158.8|carbonic anhydrase 10
mm10_v2_chr5_-_142509653_142509664	0.86229	Zic4	ENSMUST00000110784.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr12_-_67222549_67222578	0.830632	Zic4	ENSMUST00000037181.8|Mdga2|ENSMUSG00000034912.10|MAM domain containing glycosylphosphatidylinositol anchor 2
mm10_v2_chr17_-_57059795_57059863	0.82364	Zic4	ENSMUST00000040280.7|Slc25a23|ENSMUSG00000046329.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm10_v2_chr15_-_97831460_97831519	0.804069	Zic4	ENSMUST00000079838.7|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7 	ENSMUST00000118294.1|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7
mm10_v2_chr15_-_33687840_33687883	0.80196	Zic4	ENSMUST00000042021.3|Tspyl5|ENSMUSG00000038984.3|testis-specific protein, Y-encoded-like 5
mm10_v2_chr11_-_87987528_87987537	0.797584	Zic4	ENSMUST00000020775.2|Dynll2|ENSMUSG00000020483.8|dynein light chain LC8-type 2
mm10_v2_chr8_-_45382198_45382291	0.771363	Zic4	ENSMUST00000093526.6|Fam149a|ENSMUSG00000070044.9|family with sequence similarity 149, member A
mm10_v2_chr8_-_64849818_64849861	0.768623	Zic4	ENSMUST00000034017.7|Klhl2|ENSMUSG00000031605.7|kelch-like 2, Mayven
mm10_v2_chr1_-_21961581_21961581	0.733652	Zic4	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr3_+_107595031_107595164	0.726406	Zic4	ENSMUST00000014747.1|Alx3|ENSMUSG00000014603.1|aristaless-like homeobox 3
mm10_v2_chr11_-_116853083_116853099	0.720478	Zic4	ENSMUST00000092404.6|Srsf2|ENSMUSG00000034120.12|serine/arginine-rich splicing factor 2
mm10_v2_chr4_+_128883549_128883611	0.719483	Zic4	ENSMUST00000035667.8|Trim62|ENSMUSG00000041000.8|tripartite motif-containing 62
mm10_v2_chr11_+_46055973_46056068	0.714248	Zic4	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chr9_+_108460518_108460571	0.700036	Zic4	ENSMUST00000061209.5|Ccdc71|ENSMUSG00000049305.5|coiled-coil domain containing 71
mm10_v2_chr15_+_99224976_99224976	0.692943	Zic4	ENSMUST00000041415.3|Kcnh3|ENSMUSG00000037579.6|potassium voltage-gated channel, subfamily H (eag-related), member 3
mm10_v2_chr7_-_16476765_16476792	0.687914	Zic4	ENSMUST00000002053.8|Npas1|ENSMUSG00000001988.8|neuronal PAS domain protein 1
mm10_v2_chr12_+_24651346_24651409	0.677962	Zic4	ENSMUST00000020982.5|Klf11|ENSMUSG00000020653.5|Kruppel-like factor 11
mm10_v2_chr17_-_34031544_34031634	0.676362	Zic4	ENSMUST00000025186.8|Slc39a7|ENSMUSG00000024327.9|solute carrier family 39 (zinc transporter), member 7
mm10_v2_chr9_-_63146980_63147011	0.674362	Zic4	ENSMUST00000055281.7|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1 	ENSMUST00000119146.1|Skor1|ENSMUSG00000022245.9|SKI family transcriptional corepressor 1
mm10_v2_chr5_-_24527276_24527276	0.662422	Zic4	ENSMUST00000088311.4|Gbx1|ENSMUSG00000067724.4|gastrulation brain homeobox 1
mm10_v2_chr17_-_34031684_34031699	0.655779	Zic4	ENSMUST00000169397.1|Slc39a7|ENSMUSG00000024327.9|solute carrier family 39 (zinc transporter), member 7
mm10_v2_chr7_-_57387172_57387222	0.6363	Zic4	ENSMUST00000068911.6|Gabrg3|ENSMUSG00000055026.7|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
mm10_v2_chr17_-_34031644_34031667	0.620052	Zic4	ENSMUST00000171872.1|Slc39a7|ENSMUSG00000024327.9|solute carrier family 39 (zinc transporter), member 7
mm10_v2_chr7_-_25297967_25298005	0.606799	Zic4	ENSMUST00000005583.5|Pafah1b3|ENSMUSG00000005447.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
mm10_v2_chr8_-_83166170_83166170	0.599578	Zic4	ENSMUST00000098605.2|Gm10645|ENSMUSG00000074228.2|predicted gene 10645
mm10_v2_chr14_-_52316323_52316344	0.597737	Zic4	ENSMUST00000135523.1|Sall2|ENSMUSG00000049532.7|sal-like 2 (Drosophila)
mm10_v2_chr7_-_25297866_25297958	0.593642	Zic4	ENSMUST00000148150.1|Pafah1b3|ENSMUSG00000005447.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 	ENSMUST00000155118.1|Pafah1b3|ENSMUSG00000005447.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
mm10_v2_chr17_+_37045963_37045975	0.588783	Zic4	ENSMUST00000025338.9|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr3_-_107986360_107986399	0.58295	Zic4	ENSMUST00000066530.6|Gstm2|ENSMUSG00000040562.6|glutathione S-transferase, mu 2
mm10_v2_chr11_+_75732869_75732975	0.574936	Zic4	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr4_+_129513581_129513644	0.573334	Zic4	ENSMUST00000062356.6|Marcksl1|ENSMUSG00000047945.6|MARCKS-like 1
mm10_v2_chr2_+_180598219_180598226	0.537488	Zic4	ENSMUST00000103059.1|Col9a3|ENSMUSG00000027570.9|collagen, type IX, alpha 3
mm10_v2_chr7_+_28458658_28458658	0.525725	Zic4	ENSMUST00000108288.3|Lrfn1|ENSMUSG00000030600.9|leucine rich repeat and fibronectin type III domain containing 1 	ENSMUST00000055110.9|Lrfn1|ENSMUSG00000030600.9|leucine rich repeat and fibronectin type III domain containing 1
mm10_v2_chr19_-_6235804_6235872	0.507595	Zic4	ENSMUST00000025695.9|Ppp2r5b|ENSMUSG00000024777.9|protein phosphatase 2, regulatory subunit B (B56), beta isoform
mm10_v2_chr7_+_28766747_28766822	0.503942	Zic4	ENSMUST00000170068.1|Sirt2|ENSMUSG00000015149.7|sirtuin 2 	ENSMUST00000072965.4|Sirt2|ENSMUSG00000015149.7|sirtuin 2
mm10_v2_chr4_+_117096049_117096083	0.492186	Zic4	ENSMUST00000030443.5|Ptch2|ENSMUSG00000028681.5|patched homolog 2
mm10_v2_chr12_+_3807017_3807063	0.483228	Zic4	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chrX_-_104671048_104671071	0.481829	Zic4	ENSMUST00000042070.5|Zdhhc15|ENSMUSG00000033906.5|zinc finger, DHHC domain containing 15
mm10_v2_chr8_+_87473116_87473163	0.480436	Zic4	ENSMUST00000182650.1|Gm2694|ENSMUSG00000097248.2|predicted gene 2694 	ENSMUST00000182758.1|Gm2694|ENSMUSG00000097248.2|predicted gene 2694 	ENSMUST00000181898.1|Gm2694|ENSMUSG00000097248.2|predicted gene 2694
mm10_v2_chr12_-_12941827_12941914	0.461676	Zic4	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr1_+_153665666_153665709	0.460869	Zic4	ENSMUST00000111814.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8 	ENSMUST00000111810.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr19_+_5447692_5447711	0.458385	Zic4	ENSMUST00000025850.5|Fosl1|ENSMUSG00000024912.5|fos-like antigen 1
mm10_v2_chr5_-_125341043_125341112	0.449387	Zic4	ENSMUST00000111390.1|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1 	ENSMUST00000086075.6|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1
mm10_v2_chr17_-_83631892_83631934	0.448689	Zic4	ENSMUST00000051482.1|Kcng3|ENSMUSG00000045053.1|potassium voltage-gated channel, subfamily G, member 3
mm10_v2_chr12_-_56535047_56535106	0.436586	Zic4	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr2_-_71367749_71367797	0.436234	Zic4	ENSMUST00000151937.1|Slc25a12|ENSMUSG00000027010.10|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm10_v2_chr4_+_42158092_42158092	0.42793	Zic4	ENSMUST00000098122.2|Gm13306|ENSMUSG00000073877.4|predicted gene 13306
mm10_v2_chr14_-_29721835_29721886	0.42782	Zic4	ENSMUST00000022567.7|Cacna2d3|ENSMUSG00000021991.7|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm10_v2_chr6_+_97807014_97807067	0.425793	Zic4	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr8_+_107031218_107031229	0.421789	Zic4	ENSMUST00000034388.9|Vps4a|ENSMUSG00000031913.9|vacuolar protein sorting 4a (yeast)
mm10_v2_chr11_+_75733037_75733148	0.411182	Zic4	ENSMUST00000131398.1|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr17_+_83706170_83706200	0.406506	Zic4	ENSMUST00000067826.8|Mta3|ENSMUSG00000055817.11|metastasis associated 3
mm10_v2_chr16_+_35983307_35983395	0.399201	Zic4	ENSMUST00000004054.6|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr10_-_81365807_81365825	0.393447	Zic4	ENSMUST00000020456.4|4930404N11Rik|ENSMUSG00000020234.4|RIKEN cDNA 4930404N11 gene
mm10_v2_chr1_-_12991109_12991177	0.386447	Zic4	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr2_+_120977017_120977107	0.383218	Zic4	ENSMUST00000067582.7|Tmem62|ENSMUSG00000054484.8|transmembrane protein 62
mm10_v2_chr1_+_75546449_75546514	0.383079	Zic4	ENSMUST00000150142.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr10_-_80577285_80577327	0.378958	Zic4	ENSMUST00000038558.8|Klf16|ENSMUSG00000035397.8|Kruppel-like factor 16
mm10_v2_chr8_+_87472805_87472822	0.372308	Zic4	ENSMUST00000180700.2|Gm2694|ENSMUSG00000097248.2|predicted gene 2694 	ENSMUST00000182174.1|Gm2694|ENSMUSG00000097248.2|predicted gene 2694 	ENSMUST00000181159.1|Gm2694|ENSMUSG00000097248.2|predicted gene 2694
mm10_v2_chr15_+_74563738_74563853	0.371945	Zic4	ENSMUST00000170845.1|Bai1|ENSMUSG00000034730.10|brain-specific angiogenesis inhibitor 1
mm10_v2_chr16_+_35983424_35983582	0.353165	Zic4	ENSMUST00000173555.1|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr3_-_109027600_109027646	0.345332	Zic4	ENSMUST00000171143.1|Fam102b|ENSMUSG00000040339.4|family with sequence similarity 102, member B
mm10_v2_chr11_-_102946688_102946725	0.339988	Zic4	ENSMUST00000057849.5|C1ql1|ENSMUSG00000045532.5|complement component 1, q subcomponent-like 1
mm10_v2_chr3_+_133310093_133310145	0.339229	Zic4	ENSMUST00000029644.9|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2 	ENSMUST00000122334.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2
mm10_v2_chr8_+_72240018_72240045	0.33574	Zic4	ENSMUST00000003117.8|Ap1m1|ENSMUSG00000003033.8|adaptor-related protein complex AP-1, mu subunit 1
mm10_v2_chrX_+_73503074_73503116	0.329311	Zic4	ENSMUST00000114479.1|Atp2b3|ENSMUSG00000031376.9|ATPase, Ca++ transporting, plasma membrane 3 	ENSMUST00000088429.1|Atp2b3|ENSMUSG00000031376.9|ATPase, Ca++ transporting, plasma membrane 3 	ENSMUST00000033744.5|Atp2b3|ENSMUSG00000031376.9|ATPase, Ca++ transporting, plasma membrane 3
mm10_v2_chr6_-_83054415_83054571	0.32208	Zic4	ENSMUST00000113962.1|Htra2|ENSMUSG00000068329.6|HtrA serine peptidase 2 	ENSMUST00000089645.6|Htra2|ENSMUSG00000068329.6|HtrA serine peptidase 2 	ENSMUST00000113963.1|Htra2|ENSMUSG00000068329.6|HtrA serine peptidase 2
mm10_v2_chr1_+_153665587_153665595	0.316334	Zic4	ENSMUST00000147700.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr1_-_43163891_43163962	0.313495	Zic4	ENSMUST00000008280.7|Fhl2|ENSMUSG00000008136.8|four and a half LIM domains 2
mm10_v2_chr8_+_87472838_87472849	0.309092	Zic4	ENSMUST00000180806.2|Gm2694|ENSMUSG00000097248.2|predicted gene 2694
mm10_v2_chr2_-_167661496_167661591	0.306931	Zic4	ENSMUST00000125544.2|Gm20431|ENSMUSG00000089739.2|predicted gene 20431 	ENSMUST00000006587.6|Tmem189|ENSMUSG00000090213.1|transmembrane protein 189
mm10_v2_chr17_-_26508463_26508519	0.303935	Zic4	ENSMUST00000025025.6|Dusp1|ENSMUSG00000024190.6|dual specificity phosphatase 1
mm10_v2_chr10_-_61979073_61979108	0.295761	Zic4	ENSMUST00000105453.1|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1 	ENSMUST00000105452.2|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1 	ENSMUST00000105454.2|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1
mm10_v2_chr16_+_16213318_16213364	0.292504	Zic4	ENSMUST00000162150.1|Pkp2|ENSMUSG00000041957.9|plakophilin 2 	ENSMUST00000161342.1|Pkp2|ENSMUSG00000041957.9|plakophilin 2 	ENSMUST00000039408.2|Pkp2|ENSMUSG00000041957.9|plakophilin 2
mm10_v2_chr14_-_64455903_64455903	0.279217	Zic4	ENSMUST00000067927.7|Msra|ENSMUSG00000054733.8|methionine sulfoxide reductase A
mm10_v2_chr18_+_56707725_56707940	0.273607	Zic4	ENSMUST00000025486.8|Lmnb1|ENSMUSG00000024590.8|lamin B1
mm10_v2_chr8_+_72240315_72240346	0.269978	Zic4	ENSMUST00000126885.1|Ap1m1|ENSMUSG00000003033.8|adaptor-related protein complex AP-1, mu subunit 1
mm10_v2_chr17_+_37045980_37046080	0.265975	Zic4	ENSMUST00000174456.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chrX_+_85574018_85574150	0.257424	Zic4	ENSMUST00000048250.3|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000137438.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000146063.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm10_v2_chr3_+_61002786_61002811	0.253582	Zic4	ENSMUST00000029331.1|P2ry1|ENSMUSG00000027765.1|purinergic receptor P2Y, G-protein coupled 1
mm10_v2_chr4_+_62965560_62965617	0.252947	Zic4	ENSMUST00000030043.6|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000107415.1|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000064814.5|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618
mm10_v2_chr17_-_29347902_29347940	0.249252	Zic4	ENSMUST00000095427.4|Mtch1|ENSMUSG00000024012.11|mitochondrial carrier homolog 1 (C. elegans) 	ENSMUST00000118366.1|Mtch1|ENSMUSG00000024012.11|mitochondrial carrier homolog 1 (C. elegans)
mm10_v2_chrX_-_7740206_7740218	0.238708	Zic4	ENSMUST00000128289.1|Ccdc120|ENSMUSG00000031150.6|coiled-coil domain containing 120
mm10_v2_chr7_-_34654342_34654398	0.235021	Zic4	ENSMUST00000108069.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr12_-_57546121_57546141	0.23253	Zic4	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr11_+_97663366_97663414	0.225079	Zic4	ENSMUST00000044730.5|Mllt6|ENSMUSG00000038437.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm10_v2_chr2_+_164879358_164879398	0.21783	Zic4	ENSMUST00000041643.3|Pcif1|ENSMUSG00000039849.5|PDX1 C-terminal inhibiting factor 1
mm10_v2_chrX_-_10216918_10216921	0.2178	Zic4	ENSMUST00000072393.2|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000044598.6|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000073392.4|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115533.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115532.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator
mm10_v2_chr7_+_45873127_45873187	0.207778	Zic4	ENSMUST00000107718.1|Kdelr1|ENSMUSG00000002778.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
mm10_v2_chr4_+_109280365_109280412	0.198977	Zic4	ENSMUST00000177089.1|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15 	ENSMUST00000175776.1|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15 	ENSMUST00000132165.2|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr15_-_75909319_75909355	0.194254	Zic4	ENSMUST00000089680.3|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000141268.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000023235.6|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000109972.2|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000089681.5|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000109975.3|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000154584.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm10_v2_chr7_-_45052865_45052914	0.188726	Zic4	ENSMUST00000057293.6|Prr12|ENSMUSG00000046574.7|proline rich 12
mm10_v2_chr1_+_153665274_153665325	0.181455	Zic4	ENSMUST00000152114.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8 	ENSMUST00000111812.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr15_-_75909289_75909311	0.169347	Zic4	ENSMUST00000145764.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000116440.2|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000151066.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm10_v2_chr2_+_91922178_91922194	0.164867	Zic4	ENSMUST00000170432.1|Chrm4|ENSMUSG00000040495.3|cholinergic receptor, muscarinic 4
mm10_v2_chr17_+_26113286_26113363	0.162913	Zic4	ENSMUST00000025010.7|Tmem8|ENSMUSG00000024180.7|transmembrane protein 8 (five membrane-spanning domains)
mm10_v2_chr15_-_75909543_75909567	0.158636	Zic4	ENSMUST00000123712.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000141475.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENSMUST00000144614.1|Eef1d|ENSMUSG00000055762.9|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm10_v2_chr2_+_131909928_131909948	0.157893	Zic4	ENSMUST00000091288.6|Prnp|ENSMUSG00000079037.3|prion protein
mm10_v2_chr7_-_98119482_98119524	0.154526	Zic4	ENSMUST00000138627.1|Myo7a|ENSMUSG00000030761.9|myosin VIIA 	ENSMUST00000107127.1|Myo7a|ENSMUSG00000030761.9|myosin VIIA 	ENSMUST00000107128.1|Myo7a|ENSMUSG00000030761.9|myosin VIIA
mm10_v2_chr10_-_117845935_117845949	0.152726	Zic4	ENSMUST00000064667.7|Rap1b|ENSMUSG00000052681.7|RAS related protein 1b
mm10_v2_chr11_+_121702591_121702763	0.152714	Zic4	ENSMUST00000125580.1|Metrnl|ENSMUSG00000039208.9|meteorin, glial cell differentiation regulator-like
mm10_v2_chr3_+_137864573_137864613	0.151244	Zic4	ENSMUST00000174561.1|H2afz|ENSMUSG00000037894.7|H2A histone family, member Z 	ENSMUST00000173790.1|H2afz|ENSMUSG00000037894.7|H2A histone family, member Z
mm10_v2_chr9_-_67539392_67539392	0.147056	Zic4	ENSMUST00000039662.8|Tln2|ENSMUSG00000052698.8|talin 2
mm10_v2_chr1_+_153665627_153665657	0.136029	Zic4	ENSMUST00000147482.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr7_+_45570342_45570373	0.13533	Zic4	ENSMUST00000120864.1|Bcat2|ENSMUSG00000030826.11|branched chain aminotransferase 2, mitochondrial
mm10_v2_chr9_+_58554799_58554799	0.133535	Zic4	ENSMUST00000098676.2|Gm10657|ENSMUSG00000074273.2|predicted gene 10657
mm10_v2_chrX_+_101429555_101429708	0.124689	Zic4	ENSMUST00000033673.6|Nono|ENSMUSG00000031311.11|non-POU-domain-containing, octamer binding protein
mm10_v2_chr12_+_102128718_102128739	0.103728	Zic4	ENSMUST00000159329.1|Slc24a4|ENSMUSG00000041771.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm10_v2_chr11_+_57801575_57801649	0.102888	Zic4	ENSMUST00000020826.5|Sap30l|ENSMUSG00000020519.5|SAP30-like
mm10_v2_chr4_-_64046925_64047015	0.0965171	Zic4	ENSMUST00000107377.3|Tnc|ENSMUSG00000028364.9|tenascin C
mm10_v2_chr11_-_78497458_78497539	0.0957922	Zic4	ENSMUST00000108287.3|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr11_-_59290746_59290758	0.0930508	Zic4	ENSMUST00000010044.7|Wnt3a|ENSMUSG00000009900.7|wingless-related MMTV integration site 3A
mm10_v2_chr2_+_167062934_167062934	0.0887544	Zic4	ENSMUST00000125674.1|1500012F01Rik|ENSMUSG00000074578.6|RIKEN cDNA 1500012F01 gene
mm10_v2_chr18_-_24603464_24603530	0.0882224	Zic4	ENSMUST00000154205.1|Slc39a6|ENSMUSG00000024270.5|solute carrier family 39 (metal ion transporter), member 6
mm10_v2_chr7_+_45872772_45872857	0.0838299	Zic4	ENSMUST00000002855.5|Kdelr1|ENSMUSG00000002778.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 	ENSMUST00000107719.1|Kdelr1|ENSMUSG00000002778.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
mm10_v2_chr18_-_80713062_80713080	0.0830834	Zic4	ENSMUST00000170905.1|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 	ENSMUST00000078049.4|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
mm10_v2_chrX_-_10216437_10216482	0.0783426	Zic4	ENSMUST00000115534.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator
mm10_v2_chr9_-_43105718_43105793	0.0754087	Zic4	ENSMUST00000165665.1|Arhgef12|ENSMUSG00000059495.7|Rho guanine nucleotide exchange factor (GEF) 12
mm10_v2_chr18_-_24603791_24603843	0.0715751	Zic4	ENSMUST00000070726.3|Slc39a6|ENSMUSG00000024270.5|solute carrier family 39 (metal ion transporter), member 6
mm10_v2_chr7_-_126503408_126503477	0.069558	Zic4	ENSMUST00000040202.8|Atxn2l|ENSMUSG00000032637.9|ataxin 2-like
mm10_v2_chr2_-_130642770_130642811	0.0595013	Zic4	ENSMUST00000045761.6|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3
mm10_v2_chr1_-_168431896_168431905	0.0553691	Zic4	ENSMUST00000176540.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr13_-_37994111_37994190	0.0546073	Zic4	ENSMUST00000021864.6|Ssr1|ENSMUSG00000021427.9|signal sequence receptor, alpha
mm10_v2_chr4_-_62360436_62360511	0.0477273	Zic4	ENSMUST00000084527.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15 	ENSMUST00000098033.3|Fkbp15|ENSMUSG00000066151.5|FK506 binding protein 15
mm10_v2_chr11_-_85139939_85140038	0.0464768	Zic4	ENSMUST00000108075.2|Usp32|ENSMUSG00000000804.8|ubiquitin specific peptidase 32
mm10_v2_chr12_-_31499541_31499616	0.0462906	Zic4	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr16_+_20733104_20733158	0.0448577	Zic4	ENSMUST00000115423.1|Chrd|ENSMUSG00000006958.7|chordin 	ENSMUST00000007171.6|Chrd|ENSMUSG00000006958.7|chordin
mm10_v2_chr11_-_70669283_70669416	0.0423036	Zic4	ENSMUST00000129434.1|Spag7|ENSMUSG00000018287.6|sperm associated antigen 7 	ENSMUST00000018431.6|Spag7|ENSMUSG00000018287.6|sperm associated antigen 7
mm10_v2_chr1_+_87853264_87853306	0.0418593	Zic4	ENSMUST00000027517.7|Dgkd|ENSMUSG00000070738.4|diacylglycerol kinase, delta
mm10_v2_chr7_+_27653906_27653960	0.0400356	Zic4	ENSMUST00000008088.7|Ttc9b|ENSMUSG00000007944.7|tetratricopeptide repeat domain 9B
mm10_v2_chr7_-_70360593_70360746	0.0332314	Zic4	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr11_-_78497734_78497793	0.0324435	Zic4	ENSMUST00000061174.6|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr2_-_73775341_73775378	0.0320908	Zic4	ENSMUST00000112024.3|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000166199.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000180045.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr2_+_147187424_147187424	0.0281746	Zic4	ENSMUST00000144411.1|6430503K07Rik|ENSMUSG00000053545.6|RIKEN cDNA 6430503K07 gene
mm10_v2_chr6_+_47877204_47877204	0.0272523	Zic4	ENSMUST00000061890.7|Zfp282|ENSMUSG00000025821.9|zinc finger protein 282
mm10_v2_chr7_+_98703091_98703137	0.0264382	Zic4	ENSMUST00000033009.9|Prkrir|ENSMUSG00000030753.9|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
mm10_v2_chr4_-_156197479_156197496	0.025662	Zic4	ENSMUST00000075787.6|Agrn|ENSMUSG00000041936.12|agrin 	ENSMUST00000180572.1|Agrn|ENSMUSG00000041936.12|agrin
mm10_v2_chr4_-_108833544_108833597	0.0183552	Zic4	ENSMUST00000102740.1|Btf3l4|ENSMUSG00000028568.10|basic transcription factor 3-like 4 	ENSMUST00000102741.1|Btf3l4|ENSMUSG00000028568.10|basic transcription factor 3-like 4
mm10_v2_chr9_+_65346066_65346077	0.0121897	Zic4	ENSMUST00000048184.2|Pdcd7|ENSMUSG00000041837.3|programmed cell death 7
mm10_v2_chr8_-_36613937_36613948	0.0100679	Zic4	ENSMUST00000033923.7|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
