mm10_v2_chr13_-_100786402_100786570	0.710918	Zkscan3	ENSMUST00000174038.1|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000091295.7|Ccnb1|ENSMUSG00000041431.10|cyclin B1 	ENSMUST00000072119.8|Ccnb1|ENSMUSG00000041431.10|cyclin B1
mm10_v2_chr11_-_75422586_75422701	0.416281	Zkscan3	ENSMUST00000138661.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1 	ENSMUST00000000769.7|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm10_v2_chr2_+_104095796_104095805	0.357044	Zkscan3	ENSMUST00000040423.5|Cd59a|ENSMUSG00000032679.6|CD59a antigen 	ENSMUST00000168176.1|Cd59a|ENSMUSG00000032679.6|CD59a antigen
mm10_v2_chr3_+_146500071_146500109	0.339466	Zkscan3	ENSMUST00000119130.1|Gng5|ENSMUSG00000068523.6|guanine nucleotide binding protein (G protein), gamma 5
mm10_v2_chr4_+_156026120_156026164	0.322865	Zkscan3	ENSMUST00000103173.3|Tnfrsf18|ENSMUSG00000041954.12|tumor necrosis factor receptor superfamily, member 18
mm10_v2_chr3_+_79629074_79629115	0.3066	Zkscan3	ENSMUST00000029388.8|4930579G24Rik|ENSMUSG00000027811.8|RIKEN cDNA 4930579G24 gene
mm10_v2_chr5_-_88675613_88675670	0.284057	Zkscan3	ENSMUST00000113234.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1 	ENSMUST00000153565.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1
mm10_v2_chr3_+_146499850_146499890	0.255705	Zkscan3	ENSMUST00000118280.1|Gng5|ENSMUSG00000068523.6|guanine nucleotide binding protein (G protein), gamma 5
mm10_v2_chr10_-_33951190_33951263	0.215948	Zkscan3	ENSMUST00000048222.4|Zufsp|ENSMUSG00000039531.7|zinc finger with UFM1-specific peptidase domain
mm10_v2_chrX_-_17571563_17571641	0.215228	Zkscan3	ENSMUST00000177213.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chrX_-_17572241_17572325	0.187522	Zkscan3	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr5_+_24985840_24985862	0.179497	Zkscan3	ENSMUST00000075081.6|1500035N22Rik|ENSMUSG00000059631.6|RIKEN cDNA 1500035N22 gene
mm10_v2_chr11_-_75422524_75422561	0.177947	Zkscan3	ENSMUST00000125982.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1 	ENSMUST00000137103.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm10_v2_chr5_-_88675190_88675242	0.174271	Zkscan3	ENSMUST00000133532.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1 	ENSMUST00000150438.1|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1
mm10_v2_chr8_+_33732237_33732339	0.16958	Zkscan3	ENSMUST00000171010.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr14_+_51893610_51893677	0.169333	Zkscan3	ENSMUST00000047726.5|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2 	ENSMUST00000161888.1|Slc39a2|ENSMUSG00000072572.2|solute carrier family 39 (zinc transporter), member 2
mm10_v2_chr13_-_19395728_19395789	0.166954	Zkscan3	ENSMUST00000039694.7|Stard3nl|ENSMUSG00000003062.8|STARD3 N-terminal like
mm10_v2_chr1_+_132298606_132298631	0.156255	Zkscan3	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr2_+_104069819_104069891	0.155778	Zkscan3	ENSMUST00000111131.2|Cd59b|ENSMUSG00000068686.6|CD59b antigen 	ENSMUST00000111132.1|Cd59b|ENSMUSG00000068686.6|CD59b antigen 	ENSMUST00000129749.1|Cd59b|ENSMUSG00000068686.6|CD59b antigen
mm10_v2_chr12_+_76533540_76533597	0.154241	Zkscan3	ENSMUST00000075249.4|Plekhg3|ENSMUSG00000052609.8|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm10_v2_chr3_-_95687846_95687917	0.151243	Zkscan3	ENSMUST00000015994.3|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000148854.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4 	ENSMUST00000117782.1|Adamtsl4|ENSMUSG00000015850.5|ADAMTS-like 4
mm10_v2_chrX_-_75874536_75874590	0.148443	Zkscan3	ENSMUST00000033547.7|Pls3|ENSMUSG00000016382.9|plastin 3 (T-isoform)
mm10_v2_chr1_+_180942452_180942477	0.147785	Zkscan3	ENSMUST00000027800.8|Tmem63a|ENSMUSG00000026519.10|transmembrane protein 63a
mm10_v2_chr7_+_101896340_101896431	0.136542	Zkscan3	ENSMUST00000035395.7|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000106973.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15 	ENSMUST00000144207.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr15_-_3979432_3979573	0.134366	Zkscan3	ENSMUST00000022791.8|Fbxo4|ENSMUSG00000022184.8|F-box protein 4
mm10_v2_chr4_+_156026304_156026371	0.127782	Zkscan3	ENSMUST00000040274.7|Tnfrsf18|ENSMUSG00000041954.12|tumor necrosis factor receptor superfamily, member 18 	ENSMUST00000122001.1|Tnfrsf18|ENSMUSG00000041954.12|tumor necrosis factor receptor superfamily, member 18
mm10_v2_chr13_+_104109737_104109746	0.122674	Zkscan3	ENSMUST00000044385.7|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm10_v2_chr2_-_66634952_66634952	0.112474	Zkscan3	ENSMUST00000100064.2|Scn9a|ENSMUSG00000075316.5|sodium channel, voltage-gated, type IX, alpha 	ENSMUST00000100063.2|Scn9a|ENSMUSG00000075316.5|sodium channel, voltage-gated, type IX, alpha
mm10_v2_chr13_+_44730726_44730838	0.101931	Zkscan3	ENSMUST00000173704.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000044608.7|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000173367.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr1_-_173333503_173333520	0.100604	Zkscan3	ENSMUST00000038227.4|Darc|ENSMUSG00000037872.4|Duffy blood group, chemokine receptor
mm10_v2_chr4_+_63544747_63544772	0.0989461	Zkscan3	ENSMUST00000035301.6|Atp6v1g1|ENSMUSG00000039105.6|ATPase, H+ transporting, lysosomal V1 subunit G1
mm10_v2_chr2_+_121171155_121171198	0.0973372	Zkscan3	ENSMUST00000110658.1|Tubgcp4|ENSMUSG00000027263.6|tubulin, gamma complex associated protein 4
mm10_v2_chr6_-_43666158_43666278	0.09615	Zkscan3	ENSMUST00000114644.2|Tpk1|ENSMUSG00000029735.11|thiamine pyrophosphokinase 	ENSMUST00000150599.1|Tpk1|ENSMUSG00000029735.11|thiamine pyrophosphokinase 	ENSMUST00000067888.7|Tpk1|ENSMUSG00000029735.11|thiamine pyrophosphokinase
mm10_v2_chr11_-_102365111_102365280	0.0928856	Zkscan3	ENSMUST00000006749.9|Slc4a1|ENSMUSG00000006574.9|solute carrier family 4 (anion exchanger), member 1
mm10_v2_chr1_+_135232045_135232110	0.0848024	Zkscan3	ENSMUST00000110798.3|Gm4204|ENSMUSG00000079139.3|predicted gene 4204
mm10_v2_chr12_+_69724939_69724986	0.0841208	Zkscan3	ENSMUST00000021372.5|Atp5s|ENSMUSG00000054894.5|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s
mm10_v2_chr2_-_30194112_30194143	0.0799407	Zkscan3	ENSMUST00000113659.1|Ccbl1|ENSMUSG00000039648.8|cysteine conjugate-beta lyase 1 	ENSMUST00000113660.1|Ccbl1|ENSMUSG00000039648.8|cysteine conjugate-beta lyase 1
mm10_v2_chr7_+_126759601_126759651	0.0792641	Zkscan3	ENSMUST00000050201.4|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3 	ENSMUST00000057669.9|Mapk3|ENSMUSG00000063065.7|mitogen-activated protein kinase 3
mm10_v2_chr7_-_81345189_81345254	0.0790272	Zkscan3	ENSMUST00000080813.4|Rps17|ENSMUSG00000061787.8|ribosomal protein S17
mm10_v2_chr14_+_57424054_57424093	0.0768242	Zkscan3	ENSMUST00000122063.1|Ift88|ENSMUSG00000040040.10|intraflagellar transport 88
mm10_v2_chr8_-_70760889_70760953	0.0761415	Zkscan3	ENSMUST00000038626.8|Mpv17l2|ENSMUSG00000035559.8|MPV17 mitochondrial membrane protein-like 2
mm10_v2_chr2_+_121295437_121295486	0.0705743	Zkscan3	ENSMUST00000110639.1|Map1a|ENSMUSG00000027254.7|microtubule-associated protein 1 A
mm10_v2_chr12_+_112588753_112588842	0.069639	Zkscan3	ENSMUST00000101029.2|Inf2|ENSMUSG00000037679.8|inverted formin, FH2 and WH2 domain containing
mm10_v2_chr12_-_69724830_69724885	0.0685346	Zkscan3	ENSMUST00000021370.8|L2hgdh|ENSMUSG00000020988.8|L-2-hydroxyglutarate dehydrogenase
mm10_v2_chr7_-_127020321_127020336	0.0647074	Zkscan3	ENSMUST00000032918.2|Pagr1a|ENSMUSG00000030680.3|PAXIP1 associated glutamate rich protein 1A
mm10_v2_chr11_-_102218923_102218935	0.0635235	Zkscan3	ENSMUST00000131254.1|Hdac5|ENSMUSG00000008855.11|histone deacetylase 5
mm10_v2_chr4_+_15957923_15958016	0.0622864	Zkscan3	ENSMUST00000029879.8|Nbn|ENSMUSG00000028224.8|nibrin 	ENSMUST00000149069.1|Nbn|ENSMUSG00000028224.8|nibrin
mm10_v2_chr13_+_104109752_104109829	0.0618958	Zkscan3	ENSMUST00000160322.1|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta 	ENSMUST00000159574.1|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm10_v2_chr1_+_37997975_37998010	0.0573504	Zkscan3	ENSMUST00000027252.7|Eif5b|ENSMUSG00000026083.7|eukaryotic translation initiation factor 5B
mm10_v2_chr9_+_114688782_114688813	0.0569578	Zkscan3	ENSMUST00000047404.6|Dync1li1|ENSMUSG00000032435.8|dynein cytoplasmic 1 light intermediate chain 1
mm10_v2_chr18_+_67800101_67800147	0.0543048	Zkscan3	ENSMUST00000025425.5|Cep192|ENSMUSG00000024542.8|centrosomal protein 192
mm10_v2_chr11_-_100650693_100650749	0.0538988	Zkscan3	ENSMUST00000103119.3|Zfp385c|ENSMUSG00000014198.9|zinc finger protein 385C
mm10_v2_chr13_-_38658991_38659038	0.0530372	Zkscan3	ENSMUST00000001757.7|Eef1e1|ENSMUSG00000001707.7|eukaryotic translation elongation factor 1 epsilon 1
mm10_v2_chr8_+_70616816_70616930	0.0406258	Zkscan3	ENSMUST00000052437.3|Lrrc25|ENSMUSG00000049988.3|leucine rich repeat containing 25
mm10_v2_chr2_+_121171204_121171279	0.0403607	Zkscan3	ENSMUST00000039541.5|Tubgcp4|ENSMUSG00000027263.6|tubulin, gamma complex associated protein 4 	ENSMUST00000110657.1|Tubgcp4|ENSMUSG00000027263.6|tubulin, gamma complex associated protein 4
mm10_v2_chr18_+_61105844_61105890	0.0393969	Zkscan3	ENSMUST00000115268.3|Csf1r|ENSMUSG00000024621.9|colony stimulating factor 1 receptor
mm10_v2_chr1_+_58795371_58795447	0.0365915	Zkscan3	ENSMUST00000027189.8|Casp8|ENSMUSG00000026029.8|caspase 8
mm10_v2_chr11_+_35769462_35769484	0.0356691	Zkscan3	ENSMUST00000018990.7|Pank3|ENSMUSG00000018846.8|pantothenate kinase 3
mm10_v2_chr2_+_156613664_156613706	0.0356454	Zkscan3	ENSMUST00000169464.2|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila) 	ENSMUST00000109567.3|Dlgap4|ENSMUSG00000061689.9|discs, large homolog-associated protein 4 (Drosophila)
mm10_v2_chr6_+_125552948_125552980	0.0346856	Zkscan3	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr8_+_71396853_71396891	0.0331215	Zkscan3	ENSMUST00000002473.8|Babam1|ENSMUSG00000031820.8|BRISC and BRCA1 A complex member 1
mm10_v2_chr3_-_63929376_63929472	0.028311	Zkscan3	ENSMUST00000061706.6|E130311K13Rik|ENSMUSG00000048581.6|RIKEN cDNA E130311K13 gene
mm10_v2_chr8_+_31091593_31091650	0.0237737	Zkscan3	ENSMUST00000161713.1|Dusp26|ENSMUSG00000039661.8|dual specificity phosphatase 26 (putative)
mm10_v2_chr13_-_32851176_32851186	0.0172948	Zkscan3	ENSMUST00000091668.5|Serpinb1a|ENSMUSG00000044734.9|serine (or cysteine) peptidase inhibitor, clade B, member 1a 	ENSMUST00000076352.6|Serpinb1a|ENSMUSG00000044734.9|serine (or cysteine) peptidase inhibitor, clade B, member 1a
mm10_v2_chr2_+_32646586_32646602	0.0131828	Zkscan3	ENSMUST00000009705.7|Eng|ENSMUSG00000026814.10|endoglin 	ENSMUST00000167841.1|Eng|ENSMUSG00000026814.10|endoglin
mm10_v2_chr5_+_24586721_24586794	0.0123043	Zkscan3	ENSMUST00000121863.1|Chpf2|ENSMUSG00000038181.10|chondroitin polymerizing factor 2 	ENSMUST00000088295.4|Chpf2|ENSMUSG00000038181.10|chondroitin polymerizing factor 2
mm10_v2_chr12_+_32954179_32954278	0.010885	Zkscan3	ENSMUST00000020885.6|Sypl|ENSMUSG00000020570.8|synaptophysin-like protein
mm10_v2_chr1_-_39651165_39651196	0.00611312	Zkscan3	ENSMUST00000053355.4|Creg2|ENSMUSG00000050967.4|cellular repressor of E1A-stimulated genes 2
mm10_v2_chr17_+_46110982_46111022	0.00202084	Zkscan3	ENSMUST00000024763.3|Mrps18a|ENSMUSG00000023967.3|mitochondrial ribosomal protein S18A 	ENSMUST00000123646.1|Mrps18a|ENSMUSG00000023967.3|mitochondrial ribosomal protein S18A
mm10_v2_chr8_-_106893581_106893609	0.00149239	Zkscan3	ENSMUST00000176437.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000177068.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000169312.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000176515.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8
mm10_v2_chr10_+_80629646_80629656	0.00148117	Zkscan3	ENSMUST00000085435.5|Csnk1g2|ENSMUSG00000003345.9|casein kinase 1, gamma 2
