mm9_v1_chr16_-_67621054_67621188	0.40462	AAUCUCU	AK046800|Cadm2|239857|cell adhesion molecule 2	AK163636|Cadm2|239857|cell adhesion molecule 2	AK038842|Cadm2|239857|cell adhesion molecule 2	AK043760|Cadm2|239857|cell adhesion molecule 2	AK165030|Cadm2|239857|cell adhesion molecule 2	NM_001145977|Cadm2|239857|cell adhesion molecule 2	NM_178721|Cadm2|239857|cell adhesion molecule 2
mm9_v1_chr4_+_15808409_15808487	0.27016	AAUCUCU	AK002635|Calb1|12307|calbindin 1	AK005081|Calb1|12307|calbindin 1	AK005243|Calb1|12307|calbindin 1	AK028050|Calb1|12307|calbindin 1	AK038856|Calb1|12307|calbindin 1	AK048517|Calb1|12307|calbindin 1	AK077499|Calb1|12307|calbindin 1	NM_009788|Calb1|12307|calbindin 1	AK028327|Calb1|12307|calbindin 1	AK078358|Calb1|12307|calbindin 1	M21531|Calb1|12307|calbindin 1	BC016421|Calb1|12307|calbindin 1
mm9_v1_chr15_-_48623520_48623540	0.266946	AAUCUCU	AK140264|Csmd3|239420|CUB and Sushi multiple domains 3	AK163122|Csmd3|239420|CUB and Sushi multiple domains 3	NM_001081391|Csmd3|239420|CUB and Sushi multiple domains 3
mm9_v1_chr9_+_51573434_51573478	0.155638	AAUCUCU	AK082060|Arhgap20|244867|Rho GTPase activating protein 20	AK046916|Arhgap20|244867|Rho GTPase activating protein 20	AK040756|Arhgap20|244867|Rho GTPase activating protein 20	NM_175535|Arhgap20|244867|Rho GTPase activating protein 20	AK035563|Arhgap20|244867|Rho GTPase activating protein 20
mm9_v1_chr12_+_12268901_12269011	0.15323	AAUCUCU	NM_001146119|Fam49a|76820|family with sequence similarity 49, member A	NM_029758|Fam49a|76820|family with sequence similarity 49, member A	AK047142|Fam49a|76820|family with sequence similarity 49, member A	BC049664|Fam49a|76820|family with sequence similarity 49, member A
mm9_v1_chr2_-_6805937_6806041	0.150538	AAUCUCU	AK042749|Celf2|14007|CUGBP, Elav-like family member 2	AK164112|Celf2|14007|CUGBP, Elav-like family member 2	AK052102|Celf2|14007|CUGBP, Elav-like family member 2	AK135166|Celf2|14007|CUGBP, Elav-like family member 2	BC026856|Celf2|14007|CUGBP, Elav-like family member 2	AF090697|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110228|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160293|Celf2|14007|CUGBP, Elav-like family member 2	NM_010160|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr3_+_94114044_94114121	0.115983	AAUCUCU	AK139993|Them4|75778|thioesterase superfamily member 4	AK138397|Them4|75778|thioesterase superfamily member 4	NM_029431|Them4|75778|thioesterase superfamily member 4	BC134396|Them4|75778|thioesterase superfamily member 4	AK014834|Them4|75778|thioesterase superfamily member 4
mm9_v1_chr10_+_106708886_106708980	0.115115	AAUCUCU	NM_001033223|Lin7a|108030|lin-7 homolog A (C. elegans)	NM_001039354|Lin7a|108030|lin-7 homolog A (C. elegans)	BC105965|Lin7a|108030|lin-7 homolog A (C. elegans)	AK160671|Lin7a|108030|lin-7 homolog A (C. elegans)	BC029721|Lin7a|108030|lin-7 homolog A (C. elegans)
mm9_v1_chr6_+_125165597_125165677	0.110425	AAUCUCU	AK018783|Vamp1|22317|vesicle-associated membrane protein 1	AK037711|Vamp1|22317|vesicle-associated membrane protein 1	AK078156|Vamp1|22317|vesicle-associated membrane protein 1	NM_001080557|Vamp1|22317|vesicle-associated membrane protein 1	NM_009496|Vamp1|22317|vesicle-associated membrane protein 1	BC057587|Vamp1|22317|vesicle-associated membrane protein 1	BC049902|Vamp1|22317|vesicle-associated membrane protein 1	U61751|Vamp1|22317|vesicle-associated membrane protein 1
mm9_v1_chr7_+_52419289_52419313	0.106451	AAUCUCU	NM_182993|Slc17a7|72961|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm9_v1_chr11_-_118947424_118947559	0.0970363	AAUCUCU	BC117801|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	BC117802|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	U63387|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	BC045162|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	BC018304|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	NM_007625|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)
mm9_v1_chr9_-_58884114_58884258	0.0829007	AAUCUCU	Y09535|Neo1|18007|neogenin	BC054540|Neo1|18007|neogenin	AK084609|Neo1|18007|neogenin	NM_001042752|Neo1|18007|neogenin	NM_008684|Neo1|18007|neogenin
mm9_v1_chr2_-_73498303_73498483	0.0821884	AAUCUCU	AB264771|Chn1|108699|chimerin (chimaerin) 1	BC025023|Chn1|108699|chimerin (chimaerin) 1	AK049943|Chn1|108699|chimerin (chimaerin) 1	AK147686|Chn1|108699|chimerin (chimaerin) 1	BC010825|Chn1|108699|chimerin (chimaerin) 1	BC024796|Chn1|108699|chimerin (chimaerin) 1	AK032630|Chn1|108699|chimerin (chimaerin) 1	AK075606|Chn1|108699|chimerin (chimaerin) 1	NM_001166604|Chn1|108699|chimerin (chimaerin) 1	NM_175752|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chrX_+_130829763_130829919	0.0810572	AAUCUCU	BC042623|Tmem35|67564|transmembrane protein 35	NM_026239|Tmem35|67564|transmembrane protein 35	BC050880|Tmem35|67564|transmembrane protein 35
mm9_v1_chr2_-_7002344_7002370	0.0808078	AAUCUCU	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr4_+_95634005_95634072	0.0797858	AAUCUCU	AK020924|Hook1|77963|hook homolog 1 (Drosophila)	AK028714|Hook1|77963|hook homolog 1 (Drosophila)	AK038941|Hook1|77963|hook homolog 1 (Drosophila)	AK043870|Hook1|77963|hook homolog 1 (Drosophila)	AK049897|Hook1|77963|hook homolog 1 (Drosophila)	BC061688|Hook1|77963|hook homolog 1 (Drosophila)	NM_030014|Hook1|77963|hook homolog 1 (Drosophila)
mm9_v1_chr2_+_21289168_21289199	0.0793161	AAUCUCU	AK083234|Gpr158|241263|G protein-coupled receptor 158	AK086256|Gpr158|241263|G protein-coupled receptor 158	NM_001004761|Gpr158|241263|G protein-coupled receptor 158	AK030530|Gpr158|241263|G protein-coupled receptor 158
mm9_v1_chr10_-_108447674_108447736	0.0752419	AAUCUCU	BC042519|Syt1|20979|synaptotagmin I	NM_009306|Syt1|20979|synaptotagmin I
mm9_v1_chr12_+_82732188_82732357	0.0746029	AAUCUCU	AK172918|Ttc9|69480|tetratricopeptide repeat domain 9	BC028891|Ttc9|69480|tetratricopeptide repeat domain 9	AK133456|Ttc9|69480|tetratricopeptide repeat domain 9	NM_001033149|Ttc9|69480|tetratricopeptide repeat domain 9	BC139242|Ttc9|69480|tetratricopeptide repeat domain 9	BC139244|Ttc9|69480|tetratricopeptide repeat domain 9
mm9_v1_chr16_-_52453104_52453136	0.0644691	AAUCUCU	AK053201|Alcam|11658|activated leukocyte cell adhesion molecule	AK030851|Alcam|11658|activated leukocyte cell adhesion molecule	NM_009655|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chr18_+_63137566_63137569	0.0610451	AAUCUCU	BC026977|Napg|108123|N-ethylmaleimide sensitive fusion protein attachment protein gamma	NM_028017|Napg|108123|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm9_v1_chr16_-_46010510_46010548	0.0597383	AAUCUCU	NM_001134480|Plcxd2|433022|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm9_v1_chr1_+_37356722_37356738	0.0573955	AAUCUCU	AK162581|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	NM_030266|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr17_+_31194623_31194718	0.0538941	AAUCUCU	NM_009593|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	AF323659|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	Z48745|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	U34920|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	BC119471|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	AK037433|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1
mm9_v1_chr8_-_97400173_97400261	0.0519656	AAUCUCU	BC004705|Dok4|114255|docking protein 4	AK032352|Dok4|114255|docking protein 4	AK077612|Dok4|114255|docking protein 4	AK156485|Dok4|114255|docking protein 4	NM_053246|Dok4|114255|docking protein 4
mm9_v1_chr13_+_84361874_84361961	0.050531	AAUCUCU	NM_175187|Tmem161b|72745|transmembrane protein 161B	AK035319|Tmem161b|72745|transmembrane protein 161B	BC060067|Tmem161b|72745|transmembrane protein 161B	AK013305|Tmem161b|72745|transmembrane protein 161B	AK088393|Tmem161b|72745|transmembrane protein 161B	AK051974|Tmem161b|72745|transmembrane protein 161B	BC051663|Tmem161b|72745|transmembrane protein 161B
mm9_v1_chr1_-_95375372_95375387	0.0495667	AAUCUCU	BC027779|Hdlbp|110611|high density lipoprotein (HDL) binding protein	BC027788|Hdlbp|110611|high density lipoprotein (HDL) binding protein	NM_133808|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr4_-_87679175_87679310	0.0490864	AAUCUCU	BC021420|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AF372456|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_027326|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr9_+_25060152_25060278	0.0451257	AAUCUCU	NM_009859|Sept7|235072|septin 7	BC058587|Sept7|235072|septin 7	AK141572|Sept7|235072|septin 7	AK147986|Sept7|235072|septin 7	AK088997|Sept7|235072|septin 7	AK144127|Sept7|235072|septin 7	AK220447|Sept7|235072|septin 7
mm9_v1_chr18_-_70301202_70301243	0.0383366	AAUCUCU	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chrX_-_133403050_133403118	0.0338973	AAUCUCU	BC107383|Rab9b|319642|RAB9B, member RAS oncogene family	AK034442|Rab9b|319642|RAB9B, member RAS oncogene family	NM_176971|Rab9b|319642|RAB9B, member RAS oncogene family	AK049693|Rab9b|319642|RAB9B, member RAS oncogene family
mm9_v1_chr10_-_36858671_36858801	0.0331185	AAUCUCU	BC046601|Marcks|17118|myristoylated alanine rich protein kinase C substrate	M60474|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC002068|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC039911|Marcks|17118|myristoylated alanine rich protein kinase C substrate	NM_008538|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr2_-_7317513_7317626	0.0327463	AAUCUCU	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr15_-_102455844_102455918	0.0318119	AAUCUCU	BC026483|Atf7|223922|activating transcription factor 7	NM_146065|Atf7|223922|activating transcription factor 7	AK155444|Atf7|223922|activating transcription factor 7	AK157628|Atf7|223922|activating transcription factor 7	AK164412|Atf7|223922|activating transcription factor 7
mm9_v1_chr13_+_55794441_55794492	0.0316269	AAUCUCU	AK088693|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	BC051430|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	NM_181278|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chrX_+_98835386_98835624	0.0298276	AAUCUCU	AK076418|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_139144|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AK163296|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC025097|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC057319|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC037194|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC055851|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AF363030|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm9_v1_chr8_-_87823373_87823454	0.0292204	AAUCUCU	AK162726|Vps35|65114|vacuolar protein sorting 35	AK166821|Vps35|65114|vacuolar protein sorting 35	AK168880|Vps35|65114|vacuolar protein sorting 35	NM_022997|Vps35|65114|vacuolar protein sorting 35	BC005469|Vps35|65114|vacuolar protein sorting 35	BC006637|Vps35|65114|vacuolar protein sorting 35	AK150682|Vps35|65114|vacuolar protein sorting 35	AK167594|Vps35|65114|vacuolar protein sorting 35	AK167421|Vps35|65114|vacuolar protein sorting 35	AF226323|Vps35|65114|vacuolar protein sorting 35	AK170473|Vps35|65114|vacuolar protein sorting 35	AK145853|Vps35|65114|vacuolar protein sorting 35
mm9_v1_chr7_-_13404178_13404219	0.0289001	AAUCUCU	BC139021|Zfp329|67230|zinc finger protein 329	BC139023|Zfp329|67230|zinc finger protein 329	BC072665|Zfp329|67230|zinc finger protein 329	AK013271|Zfp329|67230|zinc finger protein 329	AK014562|Zfp329|67230|zinc finger protein 329	AK051535|Zfp329|67230|zinc finger protein 329	NM_026046|Zfp329|67230|zinc finger protein 329
mm9_v1_chrX_-_105011493_105011672	0.0281359	AAUCUCU	AK019383|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	BC016070|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	AK011297|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	NM_025921|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene
mm9_v1_chrX_-_35605626_35605657	0.0279988	AAUCUCU	NM_172930|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chr8_-_27104573_27104612	0.0261681	AAUCUCU	BC027296|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK015374|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK032677|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK043620|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK170994|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	NM_029037|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK160873|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK036348|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK138952|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene
mm9_v1_chr6_+_17587046_17587119	0.0256615	AAUCUCU	AK150587|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	BC082589|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	NM_007604|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK007550|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AY544984|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK008204|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr7_+_31076771_31076772	0.0255405	AAUCUCU	NM_001081114|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr12_-_68323528_68323535	0.0253623	AAUCUCU	AK034513|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	AK137667|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_001193266|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_207010|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2
mm9_v1_chr18_-_14131046_14131241	0.0241088	AAUCUCU	BC021376|Zfp521|225207|zinc finger protein 521	AK052655|Zfp521|225207|zinc finger protein 521	AY147406|Zfp521|225207|zinc finger protein 521	NM_145492|Zfp521|225207|zinc finger protein 521
mm9_v1_chr13_+_90229271_90229367	0.0235277	AAUCUCU	NM_025335|Tmem167|66074|transmembrane protein 167	AK021263|Tmem167|66074|transmembrane protein 167	AK032474|Tmem167|66074|transmembrane protein 167	AK161037|Tmem167|66074|transmembrane protein 167	AK031706|Tmem167|66074|transmembrane protein 167	AK007966|Tmem167|66074|transmembrane protein 167	AK019962|Tmem167|66074|transmembrane protein 167	AK016036|Tmem167|66074|transmembrane protein 167	AK012161|Tmem167|66074|transmembrane protein 167	AK002884|Tmem167|66074|transmembrane protein 167	AK088895|Tmem167|66074|transmembrane protein 167	AK160704|Tmem167|66074|transmembrane protein 167	AK007771|Tmem167|66074|transmembrane protein 167	AK132361|Tmem167|66074|transmembrane protein 167	BC085489|Tmem167|66074|transmembrane protein 167
mm9_v1_chr10_+_110601745_110601988	0.0230448	AAUCUCU	AK037158|Osbpl8|237542|oxysterol binding protein-like 8	AK050244|Osbpl8|237542|oxysterol binding protein-like 8	NM_001003717|Osbpl8|237542|oxysterol binding protein-like 8	NM_175489|Osbpl8|237542|oxysterol binding protein-like 8
mm9_v1_chr5_-_138705172_138705284	0.0225584	AAUCUCU	AK138960|BC037034|231807|cDNA sequence BC037034	AK046882|BC037034|231807|cDNA sequence BC037034	NM_153161|BC037034|231807|cDNA sequence BC037034
mm9_v1_chr16_-_17891608_17891820	0.0217245	AAUCUCU	AK153026|Dgcr2|13356|DiGeorge syndrome critical region gene 2	X95480|Dgcr2|13356|DiGeorge syndrome critical region gene 2	BC062978|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK145495|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK042786|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK161022|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK163903|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK088131|Dgcr2|13356|DiGeorge syndrome critical region gene 2	D78641|Dgcr2|13356|DiGeorge syndrome critical region gene 2	BC060636|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK163872|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK141594|Dgcr2|13356|DiGeorge syndrome critical region gene 2	NM_001109750|Dgcr2|13356|DiGeorge syndrome critical region gene 2	NM_010048|Dgcr2|13356|DiGeorge syndrome critical region gene 2
mm9_v1_chr1_-_63160764_63160840	0.0195319	AAUCUCU	AK049468|Ino80d|227195|INO80 complex subunit D	NM_001081436|Ino80d|227195|INO80 complex subunit D	NM_001114609|Ino80d|227195|INO80 complex subunit D
mm9_v1_chr5_+_3596065_3596255	0.0178285	AAUCUCU	BC090845|Pex1|71382|peroxisomal biogenesis factor 1	NM_027777|Pex1|71382|peroxisomal biogenesis factor 1
mm9_v1_chr10_+_98725858_98725868	0.0170042	AAUCUCU	AK088665|Dusp6|67603|dual specificity phosphatase 6	AK005062|Dusp6|67603|dual specificity phosphatase 6	AK088468|Dusp6|67603|dual specificity phosphatase 6	AK148192|Dusp6|67603|dual specificity phosphatase 6	AK159502|Dusp6|67603|dual specificity phosphatase 6	NM_026268|Dusp6|67603|dual specificity phosphatase 6	AK151126|Dusp6|67603|dual specificity phosphatase 6	AK152773|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr1_-_54251877_54252011	0.0154812	AAUCUCU	AK042922|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_001001883|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_172655|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AK047602|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm9_v1_chr19_+_45005608_45005655	0.0147071	AAUCUCU	NM_001081225|Fam178a|226151|family with sequence similarity 178, member A	AK031688|Fam178a|226151|family with sequence similarity 178, member A	AK147588|Fam178a|226151|family with sequence similarity 178, member A	AK020064|Fam178a|226151|family with sequence similarity 178, member A	AK045983|Fam178a|226151|family with sequence similarity 178, member A
mm9_v1_chr18_-_38129384_38129452	0.0137465	AAUCUCU	BC057367|Fchsd1|319262|FCH and double SH3 domains 1	NM_175684|Fchsd1|319262|FCH and double SH3 domains 1	BC052886|Fchsd1|319262|FCH and double SH3 domains 1	AK154732|Fchsd1|319262|FCH and double SH3 domains 1
mm9_v1_chr1_-_156573049_156573160	0.0135307	AAUCUCU	NM_009782|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit	BC150750|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm9_v1_chr1_+_136352075_136352146	0.012326	AAUCUCU	AK034170|Klhl12|240756|kelch-like 12 (Drosophila)	AK165280|Klhl12|240756|kelch-like 12 (Drosophila)	BC034514|Klhl12|240756|kelch-like 12 (Drosophila)	NM_153128|Klhl12|240756|kelch-like 12 (Drosophila)
mm9_v1_chr7_-_112959591_112959616	0.0112138	AAUCUCU	NM_025301|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr1_+_97210162_97210393	0.0110414	AAUCUCU	BC021428|Fam174a|67698|family with sequence similarity 174, member A	AK084861|Fam174a|67698|family with sequence similarity 174, member A	NM_026321|Fam174a|67698|family with sequence similarity 174, member A	AK009797|Fam174a|67698|family with sequence similarity 174, member A	AK017318|Fam174a|67698|family with sequence similarity 174, member A	AK009892|Fam174a|67698|family with sequence similarity 174, member A	AK020633|Fam174a|67698|family with sequence similarity 174, member A	AK148807|Fam174a|67698|family with sequence similarity 174, member A	AK033948|Fam174a|67698|family with sequence similarity 174, member A	AB154249|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr4_+_151671441_151671540	0.0106349	AAUCUCU	NM_133788|Icmt|57295|isoprenylcysteine carboxyl methyltransferase	AF209926|Icmt|57295|isoprenylcysteine carboxyl methyltransferase
mm9_v1_chr9_+_124036265_124036352	0.0103962	AAUCUCU	AK154595|Ccr5|12774|chemokine (C-C motif) receptor 5	NM_009917|Ccr5|12774|chemokine (C-C motif) receptor 5	AK141906|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155632|Ccr5|12774|chemokine (C-C motif) receptor 5	AK170303|Ccr5|12774|chemokine (C-C motif) receptor 5	D83648|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155628|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155867|Ccr5|12774|chemokine (C-C motif) receptor 5	X94151|Ccr5|12774|chemokine (C-C motif) receptor 5	BC105643|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103574|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103586|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103587|Ccr5|12774|chemokine (C-C motif) receptor 5	U47036|Ccr5|12774|chemokine (C-C motif) receptor 5
mm9_v1_chr5_-_92471976_92472071	0.00892858	AAUCUCU	BC117894|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	BC117895|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029066|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_177270|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029065|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_016912|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AK144574|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm9_v1_chr6_-_57485419_57485488	0.00781338	AAUCUCU	BC092238|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	NM_175523|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	AK044610|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)
mm9_v1_chr6_-_13557981_13558062	0.00702418	AAUCUCU	BC024911|Tmem168|101118|transmembrane protein 168	BC007160|Tmem168|101118|transmembrane protein 168	AK054353|Tmem168|101118|transmembrane protein 168	AK152957|Tmem168|101118|transmembrane protein 168	AK034589|Tmem168|101118|transmembrane protein 168	AK170302|Tmem168|101118|transmembrane protein 168	AK018471|Tmem168|101118|transmembrane protein 168	AK051532|Tmem168|101118|transmembrane protein 168	NM_028990|Tmem168|101118|transmembrane protein 168
mm9_v1_chr9_+_72773456_72773456	0.00600649	AAUCUCU	AK011208|Pygo1|72135|pygopus 1	NM_028116|Pygo1|72135|pygopus 1
mm9_v1_chr7_-_35841565_35841620	0.00543189	AAUCUCU	NM_009884|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	S80556|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr10_-_116813919_116814033	0.00525211	AAUCUCU	AK048615|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK046856|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK168764|Cpsf6|432508|cleavage and polyadenylation specific factor 6	BC068133|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK049749|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK077684|Cpsf6|432508|cleavage and polyadenylation specific factor 6	NM_001013391|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chrX_-_48559008_48559019	0.0050243	AAUCUCU	AK040522|Mbnl3|171170|muscleblind-like 3 (Drosophila)	NM_134163|Mbnl3|171170|muscleblind-like 3 (Drosophila)	AK088971|Mbnl3|171170|muscleblind-like 3 (Drosophila)
mm9_v1_chr2_+_119722957_119723040	0.00430561	AAUCUCU	AK046252|Mga|29808|MAX gene associated	NM_001164274|Mga|29808|MAX gene associated	NM_013720|Mga|29808|MAX gene associated	AK162302|Mga|29808|MAX gene associated	AK032570|Mga|29808|MAX gene associated	AK012050|Mga|29808|MAX gene associated	AK139919|Mga|29808|MAX gene associated	AK172962|Mga|29808|MAX gene associated
mm9_v1_chr2_+_102498839_102498845	0.00376094	AAUCUCU	AK134609|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077514|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK140095|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr9_+_30838224_30838249	0.00375963	AAUCUCU	AK036895|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_001115130|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_172765|Zbtb44|235132|zinc finger and BTB domain containing 44
mm9_v1_chrX_-_92361778_92361824	0.00357072	AAUCUCU	AK038840|Arhgef9|236915|CDC42 guanine nucleotide exchange factor (GEF) 9	AK122280|Arhgef9|236915|CDC42 guanine nucleotide exchange factor (GEF) 9	AK139416|Arhgef9|236915|CDC42 guanine nucleotide exchange factor (GEF) 9	NM_001033329|Arhgef9|236915|CDC42 guanine nucleotide exchange factor (GEF) 9
mm9_v1_chr16_+_94792513_94792513	0.00342388	AAUCUCU	NM_001113389|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr15_-_34424979_34425004	0.00240084	AAUCUCU	NM_008287|Hrsp12|15473|heat-responsive protein 12
mm9_v1_chr15_+_58720783_58720964	0.00229014	AAUCUCU	AK029069|Rnf139|75841|ring finger protein 139	NM_175226|Rnf139|75841|ring finger protein 139	AK028400|Rnf139|75841|ring finger protein 139	BC052901|Rnf139|75841|ring finger protein 139	AK033506|Rnf139|75841|ring finger protein 139	AK171807|Tatdn1|69694|TatD DNase domain containing 1
mm9_v1_chr2_-_164008333_164008477	0.00144935	AAUCUCU	AK075896|Wfdc5|209232|WAP four-disulfide core domain 5	AK131906|Wfdc5|209232|WAP four-disulfide core domain 5	AK131905|Wfdc5|209232|WAP four-disulfide core domain 5	AY669505|Wfdc5|209232|WAP four-disulfide core domain 5	BC019734|Wfdc5|209232|WAP four-disulfide core domain 5	NM_145369|Wfdc5|209232|WAP four-disulfide core domain 5
mm9_v1_chr8_+_81552335_81552485	0.000875578	AAUCUCU	BC094552|Zfp827|622675|zinc finger protein 827	NM_178267|Zfp827|622675|zinc finger protein 827	BC151183|Zfp827|622675|zinc finger protein 827	AK154905|Zfp827|622675|zinc finger protein 827
mm9_v1_chr16_+_29209780_29209780	0.000461749	AAUCUCU	AK039471|Hrasls|27281|HRAS-like suppressor	NM_013751|Hrasls|27281|HRAS-like suppressor
mm9_v1_chr14_+_21167427_21167478	0.000460978	AAUCUCU	BC080849|Fam149b|105428|family with sequence similarity 149, member B	NM_001024512|Fam149b|105428|family with sequence similarity 149, member B	AK129252|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chr3_+_95392855_95392908	0.000288732	AAUCUCU	NM_001177669|Golph3l|229593|golgi phosphoprotein 3-like	NM_001177670|Golph3l|229593|golgi phosphoprotein 3-like	NM_146133|Golph3l|229593|golgi phosphoprotein 3-like	BC047147|Golph3l|229593|golgi phosphoprotein 3-like	AK008434|Golph3l|229593|golgi phosphoprotein 3-like	AK089547|Golph3l|229593|golgi phosphoprotein 3-like	AK160454|Golph3l|229593|golgi phosphoprotein 3-like	AK169724|Golph3l|229593|golgi phosphoprotein 3-like	AK167675|Golph3l|229593|golgi phosphoprotein 3-like
mm9_v1_chr7_+_52104591_52104713	7.4319e-05	AAUCUCU	AK003638|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	NM_026270|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	AK141771|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	AK154110|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	BC132372|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	BC132374|Akt1s1|67605|AKT1 substrate 1 (proline-rich)	AK030571|Akt1s1|67605|AKT1 substrate 1 (proline-rich)
