mm9_v1_chr15_-_56526052_56526100	3.0735	NKX3-2.p2	U52524|Has2|15117|hyaluronan synthase 2	BC080281|Has2|15117|hyaluronan synthase 2	U69695|Has2|15117|hyaluronan synthase 2	AK045020|Has2|15117|hyaluronan synthase 2	AK079729|Has2|15117|hyaluronan synthase 2	NM_008216|Has2|15117|hyaluronan synthase 2
mm9_v1_chr12_+_75385267_75385319	2.82485	NKX3-2.p2	AK007020|1700086L19Rik|74284|RIKEN cDNA 1700086L19 gene
mm9_v1_chr6_+_7505070_7505199	2.80438	NKX3-2.p2	D17584|Tac1|21333|tachykinin 1	NM_009311|Tac1|21333|tachykinin 1	BC117081|Tac1|21333|tachykinin 1	BC119122|Tac1|21333|tachykinin 1	BC144737|Tac1|21333|tachykinin 1
mm9_v1_chr9_-_10904725_10904816	2.79019	NKX3-2.p2	AK138164|Cntn5|244682|contactin 5	AK162856|Cntn5|244682|contactin 5	NM_001033359|Cntn5|244682|contactin 5	NM_001170787|Cntn5|244682|contactin 5
mm9_v1_chr8_+_65430028_65430291	2.51464	NKX3-2.p2	AJ278998|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK049843|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK220280|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK013644|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC017601|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	NM_023689|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK164338|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC053334|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
mm9_v1_chr18_+_61085283_61085301	2.36166	NKX3-2.p2	AK083245|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK163179|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	NM_177407|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK122410|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X14836|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr14_+_66963139_66963219	2.21997	NKX3-2.p2	BC014707|Stmn4|56471|stathmin-like 4	BC046752|Stmn4|56471|stathmin-like 4	NM_019675|Stmn4|56471|stathmin-like 4
mm9_v1_chr12_-_11443284_11443537	2.17013	NKX3-2.p2	BC046226|Vsnl1|26950|visinin-like 1	AK144454|Vsnl1|26950|visinin-like 1	AK160224|Vsnl1|26950|visinin-like 1	AJ489331|Vsnl1|26950|visinin-like 1	NM_012038|Vsnl1|26950|visinin-like 1
mm9_v1_chr19_-_17912073_17912162	2.14381	NKX3-2.p2	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr5_+_67067497_67067526	2.0092	NKX3-2.p2	BC039177|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AB025313|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AF172334|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr1_+_174430359_174430439	1.79383	NKX3-2.p2	AK151576|Tagln2|21346|transgelin 2	NM_178598|Tagln2|21346|transgelin 2	AK167395|Tagln2|21346|transgelin 2	BC009076|Tagln2|21346|transgelin 2	AK167922|Tagln2|21346|transgelin 2	AF149291|Tagln2|21346|transgelin 2	AK171088|Tagln2|21346|transgelin 2	AK172892|Tagln2|21346|transgelin 2	AF465519|Tagln2|21346|transgelin 2
mm9_v1_chr16_-_52453104_52453136	1.78696	NKX3-2.p2	AK053201|Alcam|11658|activated leukocyte cell adhesion molecule	AK030851|Alcam|11658|activated leukocyte cell adhesion molecule	NM_009655|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chr9_-_29770699_29770842	1.76729	NKX3-2.p2	AK138263|Ntm|235106|neurotrimin	AK045973|Ntm|235106|neurotrimin	AK046377|Ntm|235106|neurotrimin	NM_172290|Ntm|235106|neurotrimin	AK042854|Ntm|235106|neurotrimin	AK140516|Ntm|235106|neurotrimin	AK020998|Ntm|235106|neurotrimin	AK020745|Ntm|235106|neurotrimin
mm9_v1_chr1_+_75502181_75502246	1.76627	NKX3-2.p2	AK080818|Obsl1|98733|obscurin-like 1
mm9_v1_chr7_+_97535490_97535508	1.63453	NKX3-2.p2	AK051653|Sytl2|83671|synaptotagmin-like 2	NM_001040087|Sytl2|83671|synaptotagmin-like 2	NM_001040088|Sytl2|83671|synaptotagmin-like 2	AK162921|Sytl2|83671|synaptotagmin-like 2	AK027924|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr8_+_68141935_68142010	1.50715	NKX3-2.p2	AK013582|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166372|March1|72925|membrane-associated ring finger (C3HC4) 1	AK086052|March1|72925|membrane-associated ring finger (C3HC4) 1	AK137337|March1|72925|membrane-associated ring finger (C3HC4) 1	AK160684|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chrX_+_10062237_10062294	1.49568	NKX3-2.p2	NM_019634|Tspan7|21912|tetraspanin 7	AK195558|Tspan7|21912|tetraspanin 7	AK147306|Tspan7|21912|tetraspanin 7	AK147404|Tspan7|21912|tetraspanin 7	AK004776|Tspan7|21912|tetraspanin 7	BC058603|Tspan7|21912|tetraspanin 7	AF052492|Tspan7|21912|tetraspanin 7	BC050153|Tspan7|21912|tetraspanin 7	D26483|Tspan7|21912|tetraspanin 7
mm9_v1_chr3_-_31209216_31209240	1.42233	NKX3-2.p2	AK173217|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	BC061928|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	AK044448|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	NM_172861|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
mm9_v1_chr6_+_49772688_49772727	1.37446	NKX3-2.p2	AK002982|Npy|109648|neuropeptide Y	BC043012|Npy|109648|neuropeptide Y	NM_023456|Npy|109648|neuropeptide Y
mm9_v1_chr12_+_75098739_75098790	1.3001	NKX3-2.p2	AK137129|Syt16|238266|synaptotagmin XVI	AK032606|Syt16|238266|synaptotagmin XVI	NM_172804|Syt16|238266|synaptotagmin XVI
mm9_v1_chr5_+_67067477_67067482	1.29971	NKX3-2.p2	AK004066|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1	AK013729|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chrX_+_140098931_140098937	1.29448	NKX3-2.p2	
mm9_v1_chr15_-_90509751_90509818	1.28701	NKX3-2.p2	AK005311|Cpne8|66871|copine VIII	BC076564|Cpne8|66871|copine VIII	BC017626|Cpne8|66871|copine VIII	AK013407|Cpne8|66871|copine VIII	AK004559|Cpne8|66871|copine VIII	BC138745|Cpne8|66871|copine VIII	BC138746|Cpne8|66871|copine VIII	AK010227|Cpne8|66871|copine VIII	BC048551|Cpne8|66871|copine VIII	NM_001033851|Cpne8|66871|copine VIII	NM_025815|Cpne8|66871|copine VIII
mm9_v1_chr1_-_170362278_170362289	1.22535	NKX3-2.p2	AY157976|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr3_-_143868114_143868170	1.21869	NKX3-2.p2	AK033097|Lmo4|16911|LIM domain only 4	AK159590|Lmo4|16911|LIM domain only 4
mm9_v1_chr6_+_71657791_71657963	1.16268	NKX3-2.p2	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr12_+_87762593_87762593	1.121	NKX3-2.p2	AK044339|Esrrb|26380|estrogen related receptor, beta	NM_011934|Esrrb|26380|estrogen related receptor, beta
mm9_v1_chr13_+_13876570_13876649	1.11086	NKX3-2.p2	AK148452|Gng4|14706|guanine nucleotide binding protein (G protein), gamma 4
mm9_v1_chr6_+_97160749_97160814	1.10145	NKX3-2.p2	AF421860|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK077826|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	NM_022992|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK076519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK088205|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF133912|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	BC003897|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK008519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK005259|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF265214|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chr15_+_54402914_54402981	1.09433	NKX3-2.p2	NM_178920|Mal2|105853|mal, T-cell differentiation protein 2
mm9_v1_chr2_+_179777418_179777493	1.06962	NKX3-2.p2	AK173004|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK054560|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK038669|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr10_-_127935725_127935761	1.05636	NKX3-2.p2	BC037527|Myl6b|216459|myosin, light polypeptide 6B	NM_172259|Myl6b|216459|myosin, light polypeptide 6B
mm9_v1_chr14_+_67530044_67530096	1.04332	NKX3-2.p2	AK043910|Pnma2|239157|paraneoplastic antigen MA2	NM_175498|Pnma2|239157|paraneoplastic antigen MA2	AK220357|Pnma2|239157|paraneoplastic antigen MA2	AK043718|Pnma2|239157|paraneoplastic antigen MA2
mm9_v1_chr3_+_125106995_125107008	1.03437	NKX3-2.p2	AF520870|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	AK140992|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	NM_022565|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm9_v1_chr6_-_55631085_55631098	1.00986	NKX3-2.p2	AK144377|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr6_-_88824977_88825061	0.964398	NKX3-2.p2	AK038943|Podxl2|319655|podocalyxin-like 2
mm9_v1_chr18_-_46887869_46888063	0.946432	NKX3-2.p2	BC013638|Cdo1|12583|cysteine dioxygenase 1, cytosolic	BC020375|Cdo1|12583|cysteine dioxygenase 1, cytosolic	NM_033037|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK004249|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK011032|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK149582|Cdo1|12583|cysteine dioxygenase 1, cytosolic
mm9_v1_chr2_-_63022140_63022343	0.936464	NKX3-2.p2	AJ291608|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK052366|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK043768|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK034003|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_133207|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm9_v1_chr2_+_49921978_49921983	0.921851	NKX3-2.p2	NM_177139|Lypd6|320343|LY6/PLAUR domain containing 6	AK053620|Lypd6|320343|LY6/PLAUR domain containing 6
mm9_v1_chr1_-_64167952_64168022	0.913072	NKX3-2.p2	BC019604|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	NM_033563|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC004700|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC040794|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AF338369|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK149362|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr4_-_128798481_128798555	0.911935	NKX3-2.p2	BC049607|Hpca|15444|hippocalcin	NM_010471|Hpca|15444|hippocalcin	AK002992|Hpca|15444|hippocalcin
mm9_v1_chr19_+_27292039_27292085	0.906191	NKX3-2.p2	BC013622|Vldlr|22359|very low density lipoprotein receptor	L33417|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr14_-_20796255_20796277	0.890915	NKX3-2.p2	AK003588|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	AK036138|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2
mm9_v1_chr12_-_42212538_42212554	0.889688	NKX3-2.p2	AK036316|Lrrn3|16981|leucine rich repeat protein 3, neuronal	D49802|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr10_+_99478457_99478639	0.888703	NKX3-2.p2	AK018777|Kitl|17311|kit ligand	NM_013598|Kitl|17311|kit ligand	U44725|Kitl|17311|kit ligand	AK134301|Kitl|17311|kit ligand	AK041961|Kitl|17311|kit ligand	AK165233|Kitl|17311|kit ligand	BC011322|Kitl|17311|kit ligand	M57647|Kitl|17311|kit ligand	S40364|Kitl|17311|kit ligand	S40534|Kitl|17311|kit ligand	S40536|Kitl|17311|kit ligand	M64262|Kitl|17311|kit ligand	X95379|Kitl|17311|kit ligand	X95380|Kitl|17311|kit ligand	X95381|Kitl|17311|kit ligand	X99322|Kitl|17311|kit ligand	Y10287|Kitl|17311|kit ligand	M59915|Kitl|17311|kit ligand
mm9_v1_chr4_+_42930076_42930171	0.885443	NKX3-2.p2	BC057092|N28178|230085|expressed sequence N28178	NM_172690|N28178|230085|expressed sequence N28178	AK046283|N28178|230085|expressed sequence N28178	AK038528|N28178|230085|expressed sequence N28178
mm9_v1_chr6_+_17015148_17015148	0.88146	NKX3-2.p2	NM_207176|Tes|21753|testis derived transcript
mm9_v1_chr12_+_30213224_30213265	0.87785	NKX3-2.p2	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr7_-_54387695_54387755	0.877783	NKX3-2.p2	BC057339|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	BC051975|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	AK038416|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr2_-_32702610_32702727	0.876573	NKX3-2.p2	AF326545|Stxbp1|20910|syntaxin binding protein 1	AF326563|Stxbp1|20910|syntaxin binding protein 1	D45903|Stxbp1|20910|syntaxin binding protein 1	BC031728|Stxbp1|20910|syntaxin binding protein 1
mm9_v1_chr12_-_73509925_73510040	0.876362	NKX3-2.p2	NM_153457|Rtn1|104001|reticulon 1	AK132364|Rtn1|104001|reticulon 1
mm9_v1_chr10_-_24919916_24919967	0.875864	NKX3-2.p2	AK086696|Akap7|432442|A kinase (PRKA) anchor protein 7	AK085630|Akap7|432442|A kinase (PRKA) anchor protein 7	AK139238|Akap7|432442|A kinase (PRKA) anchor protein 7
mm9_v1_chr5_+_13125413_13125592	0.874301	NKX3-2.p2	AK166127|LOC100503462|100503462|hypothetical LOC100503462	AK052051|LOC100503462|100503462|hypothetical LOC100503462
mm9_v1_chr6_+_65621583_65621630	0.861401	NKX3-2.p2	AK049802|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	AK029210|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	NM_172399|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	BC047154|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene
mm9_v1_chr15_+_97998282_97998326	0.853002	NKX3-2.p2	BC090621|AI836003|239650|expressed sequence AI836003
mm9_v1_chrX_+_117403867_117404011	0.839659	NKX3-2.p2	AJ564976|Pcdh11x|245578|protocadherin 11 X-linked	AK031276|Pcdh11x|245578|protocadherin 11 X-linked	AK032315|Pcdh11x|245578|protocadherin 11 X-linked	AK039071|Pcdh11x|245578|protocadherin 11 X-linked	NM_001081385|Pcdh11x|245578|protocadherin 11 X-linked	BC126930|Pcdh11x|245578|protocadherin 11 X-linked
mm9_v1_chr14_+_52504516_52504626	0.838982	NKX3-2.p2	NM_001029990|Mett11d1|52535|methyltransferase 11 domain containing 1	AK156895|Mett11d1|52535|methyltransferase 11 domain containing 1	AK172330|Mett11d1|52535|methyltransferase 11 domain containing 1	BC138944|Mett11d1|52535|methyltransferase 11 domain containing 1	BC145472|Mett11d1|52535|methyltransferase 11 domain containing 1	BC145473|Mett11d1|52535|methyltransferase 11 domain containing 1	BC145474|Mett11d1|52535|methyltransferase 11 domain containing 1	AK087101|Mett11d1|52535|methyltransferase 11 domain containing 1	AK155096|Mett11d1|52535|methyltransferase 11 domain containing 1	AK009576|Mett11d1|52535|methyltransferase 11 domain containing 1	AK032357|Mett11d1|52535|methyltransferase 11 domain containing 1
mm9_v1_chr6_+_91162792_91162863	0.838372	NKX3-2.p2	AK161522|Fbln2|14115|fibulin 2	AK017870|Fbln2|14115|fibulin 2	AK168688|Fbln2|14115|fibulin 2	X75285|Fbln2|14115|fibulin 2
mm9_v1_chr10_-_109892899_109893037	0.825425	NKX3-2.p2	AK080592|Gm3877|100042510|predicted gene 3877	AK035945|Nav3|260315|neuron navigator 3
mm9_v1_chr4_+_28740280_28740313	0.801114	NKX3-2.p2	AK033903|Epha7|13841|Eph receptor A7	NM_001122889|Epha7|13841|Eph receptor A7	NM_010141|Epha7|13841|Eph receptor A7	X79082|Epha7|13841|Eph receptor A7	X79083|Epha7|13841|Eph receptor A7	X79084|Epha7|13841|Eph receptor A7
mm9_v1_chr4_-_49858561_49858640	0.798025	NKX3-2.p2	AK162603|Grin3a|242443|glutamate receptor ionotropic, NMDA3A	AK044171|Grin3a|242443|glutamate receptor ionotropic, NMDA3A	AK138366|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chr6_+_17015159_17015226	0.794219	NKX3-2.p2	AK083910|Tes|21753|testis derived transcript	AK132249|Tes|21753|testis derived transcript	AK167274|Tes|21753|testis derived transcript	BC010465|Tes|21753|testis derived transcript	AK145609|Tes|21753|testis derived transcript	AK167101|Tes|21753|testis derived transcript	BC051103|Tes|21753|testis derived transcript	BC003808|Tes|21753|testis derived transcript
mm9_v1_chr8_+_24780132_24780145	0.79419	NKX3-2.p2	AK140391|Zmat4|320158|zinc finger, matrin type 4	AK140413|Zmat4|320158|zinc finger, matrin type 4	NM_177086|Zmat4|320158|zinc finger, matrin type 4	AK036254|Zmat4|320158|zinc finger, matrin type 4	AK134793|Zmat4|320158|zinc finger, matrin type 4	BC065110|Zmat4|320158|zinc finger, matrin type 4	BC079657|Zmat4|320158|zinc finger, matrin type 4
mm9_v1_chr1_+_131170034_131170050	0.79294	NKX3-2.p2	AK051714|Thsd7b|210417|thrombospondin, type I, domain containing 7B	BC063250|Thsd7b|210417|thrombospondin, type I, domain containing 7B
mm9_v1_chr16_+_22892112_22892117	0.78813	NKX3-2.p2	NM_013465|Ahsg|11625|alpha-2-HS-glycoprotein	AK149474|Ahsg|11625|alpha-2-HS-glycoprotein	AK149479|Ahsg|11625|alpha-2-HS-glycoprotein	AK167709|Ahsg|11625|alpha-2-HS-glycoprotein	AK133523|Ahsg|11625|alpha-2-HS-glycoprotein
mm9_v1_chr3_+_89324085_89324085	0.769848	NKX3-2.p2	AK137738|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK170218|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_080466|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm9_v1_chr18_+_86564229_86564343	0.754714	NKX3-2.p2	AK081325|Neto1|246317|neuropilin (NRP) and tolloid (TLL)-like 1	NM_144946|Neto1|246317|neuropilin (NRP) and tolloid (TLL)-like 1
mm9_v1_chr7_-_17509228_17509415	0.746458	NKX3-2.p2	AK169630|Calm3|12315|calmodulin 3	BC050926|Calm3|12315|calmodulin 3	M19380|Calm3|12315|calmodulin 3	AK165568|Calm3|12315|calmodulin 3	AK153179|Calm3|12315|calmodulin 3	AK152754|Calm3|12315|calmodulin 3	AK151610|Calm3|12315|calmodulin 3	NM_007590|Calm3|12315|calmodulin 3
mm9_v1_chr6_+_124959685_124959822	0.73956	NKX3-2.p2	AK086185|Zfp384|269800|zinc finger protein 384	BC064013|Zfp384|269800|zinc finger protein 384	NM_175557|Zfp384|269800|zinc finger protein 384
mm9_v1_chrX_-_35605544_35605615	0.733063	NKX3-2.p2	BC062956|Fam70a|245386|family with sequence similarity 70, member A	AK077178|Fam70a|245386|family with sequence similarity 70, member A	AK078264|Fam70a|245386|family with sequence similarity 70, member A	AK041985|Fam70a|245386|family with sequence similarity 70, member A	AK045375|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chr3_-_152645143_152645180	0.727208	NKX3-2.p2	AB028840|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	BC055737|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	NM_012028|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AB030836|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK034387|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK038434|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr2_-_12933305_12933373	0.723289	NKX3-2.p2	AB044560|C1ql3|227580|C1q-like 3
mm9_v1_chr6_-_87285690_87285768	0.722086	NKX3-2.p2	AF378762|Antxr1|69538|anthrax toxin receptor 1	BC094544|Antxr1|69538|anthrax toxin receptor 1	AK031465|Antxr1|69538|anthrax toxin receptor 1	NM_054041|Antxr1|69538|anthrax toxin receptor 1
mm9_v1_chr15_+_81767188_81767324	0.712035	NKX3-2.p2	NM_145473|Csdc2|105859|cold shock domain containing C2, RNA binding	AK132493|Csdc2|105859|cold shock domain containing C2, RNA binding	AK028916|Csdc2|105859|cold shock domain containing C2, RNA binding
mm9_v1_chr7_+_3289029_3289038	0.693624	NKX3-2.p2	NM_001093764|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr1_-_93355893_93355916	0.690909	NKX3-2.p2	AK159847|Per2|18627|period homolog 2 (Drosophila)	AK165556|Per2|18627|period homolog 2 (Drosophila)	NM_011066|Per2|18627|period homolog 2 (Drosophila)
mm9_v1_chr2_-_5635517_5635531	0.687267	NKX3-2.p2	AK147657|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK162754|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr1_-_93355838_93355884	0.678059	NKX3-2.p2	AK044658|Per2|18627|period homolog 2 (Drosophila)	AF035830|Per2|18627|period homolog 2 (Drosophila)	AK122253|Per2|18627|period homolog 2 (Drosophila)	AF036893|Per2|18627|period homolog 2 (Drosophila)
mm9_v1_chr11_-_33893151_33893192	0.677662	NKX3-2.p2	AK048178|Kcnip1|70357|Kv channel-interacting protein 1	AK081845|Kcnip1|70357|Kv channel-interacting protein 1	DQ148494|Kcnip1|70357|Kv channel-interacting protein 1	NM_001190886|Kcnip1|70357|Kv channel-interacting protein 1
mm9_v1_chr2_+_179777363_179777404	0.672151	NKX3-2.p2	BC053087|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr5_+_136559785_136559909	0.655892	NKX3-2.p2	AK154335|Rasa4|54153|RAS p21 protein activator 4	AK155146|Rasa4|54153|RAS p21 protein activator 4	NM_001039103|Rasa4|54153|RAS p21 protein activator 4	NM_133914|Rasa4|54153|RAS p21 protein activator 4	BC049381|Rasa4|54153|RAS p21 protein activator 4	AK014220|Rasa4|54153|RAS p21 protein activator 4	AK133565|Rasa4|54153|RAS p21 protein activator 4	BC027230|Rasa4|54153|RAS p21 protein activator 4	AY591339|Rasa4|54153|RAS p21 protein activator 4	DQ317932|Rasa4|54153|RAS p21 protein activator 4	AK220218|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr6_-_31348668_31348758	0.655216	NKX3-2.p2	AK043851|LOC100503869|100503869|hypothetical LOC100503869	AK045552|LOC100503869|100503869|hypothetical LOC100503869
mm9_v1_chr10_-_108447996_108448001	0.654771	NKX3-2.p2	AK013798|Syt1|20979|synaptotagmin I	AK078790|Syt1|20979|synaptotagmin I
mm9_v1_chr13_+_113078658_113078796	0.646157	NKX3-2.p2	AK039553|Ankrd55|77318|ankyrin repeat domain 55	NM_001168403|Ankrd55|77318|ankyrin repeat domain 55	NM_001168405|Ankrd55|77318|ankyrin repeat domain 55	NM_029898|Ankrd55|77318|ankyrin repeat domain 55	AK081197|Ankrd55|77318|ankyrin repeat domain 55	NM_001168404|Ankrd55|77318|ankyrin repeat domain 55	AK140417|Ankrd55|77318|ankyrin repeat domain 55
mm9_v1_chr3_-_80606500_80606592	0.641148	NKX3-2.p2	BC066193|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	X57498|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	BC048248|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chrX_+_82293610_82293751	0.638126	NKX3-2.p2	AK045257|Dmd|13405|dystrophin, muscular dystrophy	AK013510|Dmd|13405|dystrophin, muscular dystrophy	AK075809|Dmd|13405|dystrophin, muscular dystrophy	AK087829|Dmd|13405|dystrophin, muscular dystrophy	AK036936|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chr1_-_95375372_95375387	0.63643	NKX3-2.p2	BC027779|Hdlbp|110611|high density lipoprotein (HDL) binding protein	BC027788|Hdlbp|110611|high density lipoprotein (HDL) binding protein	NM_133808|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr1_-_157264398_157264577	0.625444	NKX3-2.p2	AK147403|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC153872|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF114753|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC075721|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AK141660|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	NM_011273|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1
mm9_v1_chr12_-_80273320_80273473	0.623658	NKX3-2.p2	AF035821|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AF035208|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC009810|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC080204|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC002290|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK160624|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK002289|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	NM_016800|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog
mm9_v1_chr11_-_72303447_72303476	0.621275	NKX3-2.p2	AK156007|Spns2|216892|spinster homolog 2 (Drosophila)
mm9_v1_chr4_+_104040160_104040194	0.62075	NKX3-2.p2	NM_010014|Dab1|13131|disabled homolog 1 (Drosophila)	NM_177259|Dab1|13131|disabled homolog 1 (Drosophila)	Y08379|Dab1|13131|disabled homolog 1 (Drosophila)	Y08380|Dab1|13131|disabled homolog 1 (Drosophila)	Y08381|Dab1|13131|disabled homolog 1 (Drosophila)
mm9_v1_chr11_-_70846926_70847014	0.61202	NKX3-2.p2	AJ271140|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene	BC069976|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene	AK083923|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene	AK018106|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene
mm9_v1_chr9_-_88417710_88417730	0.610797	NKX3-2.p2	BC032970|Snhg5|72655|small nucleolar RNA host gene 5	AK012825|Snhg5|72655|small nucleolar RNA host gene 5
mm9_v1_chr12_+_82046496_82046547	0.609349	NKX3-2.p2	AK002267|Srsf5|20384|serine/arginine-rich splicing factor 5	AK005552|Srsf5|20384|serine/arginine-rich splicing factor 5	AK007729|Srsf5|20384|serine/arginine-rich splicing factor 5	AK142009|Srsf5|20384|serine/arginine-rich splicing factor 5	AK146624|Srsf5|20384|serine/arginine-rich splicing factor 5	AK078065|Srsf5|20384|serine/arginine-rich splicing factor 5	BC082593|Srsf5|20384|serine/arginine-rich splicing factor 5	BC085267|Srsf5|20384|serine/arginine-rich splicing factor 5	BC038624|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chrX_-_85360961_85361026	0.606424	NKX3-2.p2	BC119580|Il1rapl1|331461|interleukin 1 receptor accessory protein-like 1	NM_001160403|Il1rapl1|331461|interleukin 1 receptor accessory protein-like 1	AK081272|Il1rapl1|331461|interleukin 1 receptor accessory protein-like 1
mm9_v1_chr10_-_108447674_108447736	0.605903	NKX3-2.p2	BC042519|Syt1|20979|synaptotagmin I	NM_009306|Syt1|20979|synaptotagmin I
mm9_v1_chr12_-_73509668_73509745	0.60438	NKX3-2.p2	BC053926|Rtn1|104001|reticulon 1	BC058579|Rtn1|104001|reticulon 1
mm9_v1_chr15_-_101966611_101966682	0.603182	NKX3-2.p2	BC048820|Spryd3|223918|SPRY domain containing 3	NM_001033277|Spryd3|223918|SPRY domain containing 3	AK146689|Spryd3|223918|SPRY domain containing 3
mm9_v1_chr3_+_28162135_28162218	0.602566	NKX3-2.p2	BC050866|Tnik|665113|TRAF2 and NCK interacting kinase	BC050868|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163007|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163008|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163009|Tnik|665113|TRAF2 and NCK interacting kinase	NM_026910|Tnik|665113|TRAF2 and NCK interacting kinase	AK041777|Tnik|665113|TRAF2 and NCK interacting kinase	AK133568|Tnik|665113|TRAF2 and NCK interacting kinase	AK039113|Tnik|665113|TRAF2 and NCK interacting kinase
mm9_v1_chr2_-_157392026_157392132	0.6015	NKX3-2.p2	AB037891|Blcap|53619|bladder cancer associated protein homolog (human)	BC026935|Blcap|53619|bladder cancer associated protein homolog (human)	BC083339|Blcap|53619|bladder cancer associated protein homolog (human)	AK038884|Blcap|53619|bladder cancer associated protein homolog (human)	AK011673|Blcap|53619|bladder cancer associated protein homolog (human)	AK170338|Blcap|53619|bladder cancer associated protein homolog (human)	AK018127|Blcap|53619|bladder cancer associated protein homolog (human)	NM_016916|Blcap|53619|bladder cancer associated protein homolog (human)
mm9_v1_chr2_-_5635547_5635807	0.595436	NKX3-2.p2	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr5_-_90312358_90312358	0.593076	NKX3-2.p2	AK031900|Adamts3|330119|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	NM_001081401|Adamts3|330119|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	NM_177872|Adamts3|330119|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
mm9_v1_chr15_-_34608600_34608626	0.59263	NKX3-2.p2	AK038556|Nipal2|223473|NIPA-like domain containing 2	BC058207|Nipal2|223473|NIPA-like domain containing 2
mm9_v1_chr1_-_170362298_170362315	0.59189	NKX3-2.p2	AK045252|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144346|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144446|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr7_+_99890204_99890223	0.590896	NKX3-2.p2	AK142206|Rab30|75985|RAB30, member RAS oncogene family	BC017550|Rab30|75985|RAB30, member RAS oncogene family	NM_029494|Rab30|75985|RAB30, member RAS oncogene family
mm9_v1_chr17_-_24826873_24826911	0.579026	NKX3-2.p2	AF117207|Syngr3|20974|synaptogyrin 3	AK081164|Syngr3|20974|synaptogyrin 3	NM_011522|Syngr3|20974|synaptogyrin 3
mm9_v1_chr11_+_52045464_52045596	0.573856	NKX3-2.p2	NM_011543|Skp1a|21402|S-phase kinase-associated protein 1A	AK078330|Skp1a|21402|S-phase kinase-associated protein 1A	AK002983|Skp1a|21402|S-phase kinase-associated protein 1A	AK012498|Skp1a|21402|S-phase kinase-associated protein 1A	AK014245|Skp1a|21402|S-phase kinase-associated protein 1A	AK027909|Skp1a|21402|S-phase kinase-associated protein 1A	AK088339|Skp1a|21402|S-phase kinase-associated protein 1A	AK160198|Skp1a|21402|S-phase kinase-associated protein 1A	AK158209|Skp1a|21402|S-phase kinase-associated protein 1A	AK166673|Skp1a|21402|S-phase kinase-associated protein 1A	AK152609|Skp1a|21402|S-phase kinase-associated protein 1A	Z47088|Skp1a|21402|S-phase kinase-associated protein 1A	BC002115|Skp1a|21402|S-phase kinase-associated protein 1A	AF083214|Skp1a|21402|S-phase kinase-associated protein 1A
mm9_v1_chr1_-_135817945_135817982	0.572036	NKX3-2.p2	AK037150|Prelp|116847|proline arginine-rich end leucine-rich repeat	BC019775|Prelp|116847|proline arginine-rich end leucine-rich repeat	AK047480|Prelp|116847|proline arginine-rich end leucine-rich repeat	NM_054077|Prelp|116847|proline arginine-rich end leucine-rich repeat
mm9_v1_chr3_-_143865162_143865359	0.571545	NKX3-2.p2	BC003488|Lmo4|16911|LIM domain only 4	BC100382|Lmo4|16911|LIM domain only 4	AF102817|Lmo4|16911|LIM domain only 4	AK138278|Lmo4|16911|LIM domain only 4	NM_001161770|Lmo4|16911|LIM domain only 4	NM_001161769|Lmo4|16911|LIM domain only 4
mm9_v1_chr17_-_87846158_87846274	0.566664	NKX3-2.p2	BC021347|Calm2|12314|calmodulin 2	BC051444|Calm2|12314|calmodulin 2	BC100301|Calm2|12314|calmodulin 2	AK013068|Calm2|12314|calmodulin 2	AK012247|Calm2|12314|calmodulin 2	AK168741|Calm2|12314|calmodulin 2	AK005089|Calm2|12314|calmodulin 2	AK012564|Calm2|12314|calmodulin 2	AK161268|Calm2|12314|calmodulin 2	AK161984|Calm2|12314|calmodulin 2	AK152303|Calm2|12314|calmodulin 2	L31642|Calm2|12314|calmodulin 2	AK160636|Calm2|12314|calmodulin 2	NM_007589|Calm2|12314|calmodulin 2
mm9_v1_chr15_-_98126513_98126591	0.566439	NKX3-2.p2	AK036826|Zfp641|239652|zinc finger protein 641	BC111896|Zfp641|239652|zinc finger protein 641	BC112418|Zfp641|239652|zinc finger protein 641	NM_173769|Zfp641|239652|zinc finger protein 641	AK087530|Zfp641|239652|zinc finger protein 641	AK136402|Zfp641|239652|zinc finger protein 641
mm9_v1_chr14_-_55272452_55272539	0.566209	NKX3-2.p2	AF124725|Acin1|56215|apoptotic chromatin condensation inducer 1	AF124729|Acin1|56215|apoptotic chromatin condensation inducer 1	BC019127|Acin1|56215|apoptotic chromatin condensation inducer 1	BC094217|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_019567|Acin1|56215|apoptotic chromatin condensation inducer 1	AK012099|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_001085472|Acin1|56215|apoptotic chromatin condensation inducer 1
mm9_v1_chr17_-_24769539_24769566	0.562711	NKX3-2.p2	AK147487|Tsc2|22084|tuberous sclerosis 2	AK171007|Tsc2|22084|tuberous sclerosis 2	U39818|Tsc2|22084|tuberous sclerosis 2	AK147016|Tsc2|22084|tuberous sclerosis 2	BC052449|Tsc2|22084|tuberous sclerosis 2	BC060701|Tsc2|22084|tuberous sclerosis 2	AK190188|Tsc2|22084|tuberous sclerosis 2	AK170589|Tsc2|22084|tuberous sclerosis 2	AK148062|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr15_-_94234549_94234733	0.558978	NKX3-2.p2	AJ512753|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	BC121792|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	AY189815|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	AY189816|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
mm9_v1_chr2_+_157385835_157385932	0.555147	NKX3-2.p2	AK003004|Nnat|18111|neuronatin	AK077465|Nnat|18111|neuronatin	AK160626|Nnat|18111|neuronatin	NM_010923|Nnat|18111|neuronatin	NM_180960|Nnat|18111|neuronatin	X83569|Nnat|18111|neuronatin	X83570|Nnat|18111|neuronatin	BC036984|Nnat|18111|neuronatin	AB004048|Nnat|18111|neuronatin	X83568|Nnat|18111|neuronatin
mm9_v1_chr11_-_103815334_103815354	0.553748	NKX3-2.p2	AK042341|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK049281|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK051430|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK141986|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK153905|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr11_+_120582777_120582942	0.553403	NKX3-2.p2	AK150203|Rac3|170758|RAS-related C3 botulinum substrate 3	NM_133223|Rac3|170758|RAS-related C3 botulinum substrate 3	AK089930|Rac3|170758|RAS-related C3 botulinum substrate 3	BC117028|Rac3|170758|RAS-related C3 botulinum substrate 3	BC119041|Rac3|170758|RAS-related C3 botulinum substrate 3	AB040819|Rac3|170758|RAS-related C3 botulinum substrate 3	AY974601|Rac3|170758|RAS-related C3 botulinum substrate 3
mm9_v1_chr8_+_97296093_97296104	0.553363	NKX3-2.p2	AB030188|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK078285|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138214|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138472|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138574|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK154646|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr3_-_80606641_80606686	0.550825	NKX3-2.p2	AK044574|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK134572|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK086614|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK043490|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK141525|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr2_+_121239637_121239649	0.548859	NKX3-2.p2	NM_007952|Pdia3|14827|protein disulfide isomerase associated 3
mm9_v1_chr9_+_46036788_46036792	0.548311	NKX3-2.p2	AK076187|Apoa1|11806|apolipoprotein A-I	AK131864|Apoa1|11806|apolipoprotein A-I	AK149576|Apoa1|11806|apolipoprotein A-I	AK161536|Apoa1|11806|apolipoprotein A-I	X64262|Apoa1|11806|apolipoprotein A-I
mm9_v1_chrX_+_130829929_130829942	0.545535	NKX3-2.p2	AK005180|Tmem35|67564|transmembrane protein 35	AK018535|Tmem35|67564|transmembrane protein 35	AK043881|Tmem35|67564|transmembrane protein 35	AK042538|Tmem35|67564|transmembrane protein 35
mm9_v1_chr9_-_15162109_15162147	0.544632	NKX3-2.p2	AK051561|5830418K08Rik|319675|RIKEN cDNA 5830418K08 gene
mm9_v1_chr2_+_132607013_132607168	0.541489	NKX3-2.p2	AK158857|Chgb|12653|chromogranin B	NM_007694|Chgb|12653|chromogranin B
mm9_v1_chr7_-_4796261_4796301	0.539591	NKX3-2.p2	NM_172737|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr2_-_84265422_84265424	0.533595	NKX3-2.p2	AK137210|Calcrl|54598|calcitonin receptor-like	NM_018782|Calcrl|54598|calcitonin receptor-like	AB015595|Calcrl|54598|calcitonin receptor-like
mm9_v1_chr4_+_120527397_120527477	0.531163	NKX3-2.p2	AK047745|Rims3|242662|regulating synaptic membrane exocytosis 3	AK043152|Rims3|242662|regulating synaptic membrane exocytosis 3
mm9_v1_chrX_+_139952975_139953253	0.525875	NKX3-2.p2	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr2_-_113839354_113839354	0.521536	NKX3-2.p2	BC058595|Gjd2|14617|gap junction protein, delta 2	NM_010290|Gjd2|14617|gap junction protein, delta 2
mm9_v1_chr6_+_31348811_31348859	0.521262	NKX3-2.p2	AK037967|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	NM_013791|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK165239|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK077541|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK164822|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	BC013703|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK171980|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	U72194|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK155457|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs
mm9_v1_chr17_-_24769569_24769573	0.519952	NKX3-2.p2	AK143799|Tsc2|22084|tuberous sclerosis 2	AK147908|Tsc2|22084|tuberous sclerosis 2	NM_001039363|Tsc2|22084|tuberous sclerosis 2	NM_011647|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chrX_+_97963061_97963090	0.519058	NKX3-2.p2	AK122474|Dlg3|53310|discs, large homolog 3 (Drosophila)	NM_001177778|Dlg3|53310|discs, large homolog 3 (Drosophila)	BC094368|Dlg3|53310|discs, large homolog 3 (Drosophila)	NM_016747|Dlg3|53310|discs, large homolog 3 (Drosophila)	D87117|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chr11_+_56825307_56825536	0.51675	NKX3-2.p2	AK049958|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC056397|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102773|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102774|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC060702|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr10_+_52410306_52410508	0.513791	NKX3-2.p2	NM_178675|Slc35f1|215085|solute carrier family 35, member F1	AK038601|Slc35f1|215085|solute carrier family 35, member F1	AK053426|Slc35f1|215085|solute carrier family 35, member F1	AK139331|Slc35f1|215085|solute carrier family 35, member F1	AK048957|Slc35f1|215085|solute carrier family 35, member F1	AK165021|Slc35f1|215085|solute carrier family 35, member F1	AK053545|Slc35f1|215085|solute carrier family 35, member F1	AK083768|Slc35f1|215085|solute carrier family 35, member F1	AK166268|Slc35f1|215085|solute carrier family 35, member F1	BC059075|Slc35f1|215085|solute carrier family 35, member F1	AK163806|Slc35f1|215085|solute carrier family 35, member F1
mm9_v1_chr13_-_36826245_36826363	0.513633	NKX3-2.p2	AK161859|Nrn1|68404|neuritin 1	BC035531|Nrn1|68404|neuritin 1	NM_153529|Nrn1|68404|neuritin 1
mm9_v1_chr4_+_28740314_28740475	0.512054	NKX3-2.p2	AK030480|Epha7|13841|Eph receptor A7	AK049848|Epha7|13841|Eph receptor A7	BC026153|Epha7|13841|Eph receptor A7	AK032973|Epha7|13841|Eph receptor A7
mm9_v1_chr2_+_84667174_84667190	0.511792	NKX3-2.p2	AK008088|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	NM_013899|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)
mm9_v1_chr8_-_72758007_72758039	0.509542	NKX3-2.p2	AK080609|Armc6|76813|armadillo repeat containing 6	AK049351|Armc6|76813|armadillo repeat containing 6
mm9_v1_chr1_+_95132413_95132473	0.508935	NKX3-2.p2	AK086298|Sned1|208777|sushi, nidogen and EGF-like domains 1	AJ584850|Sned1|208777|sushi, nidogen and EGF-like domains 1	AY169783|Sned1|208777|sushi, nidogen and EGF-like domains 1	BC145886|Sned1|208777|sushi, nidogen and EGF-like domains 1	NM_172463|Sned1|208777|sushi, nidogen and EGF-like domains 1
mm9_v1_chr6_+_117118552_117118673	0.507586	NKX3-2.p2	NM_001012477|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	NM_013655|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	NM_021704|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	AK157553|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	AK045092|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	AK075596|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	D43804|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	D43805|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	L12029|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	L12030|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC046827|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC006640|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC020297|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC029335|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	D21072|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	S74318|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	CT010389|Cxcl12|20315|chemokine (C-X-C motif) ligand 12
mm9_v1_chr11_+_23978110_23978267	0.506856	NKX3-2.p2	AK140949|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF051525|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169036|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169037|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK122557|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF186018|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK004395|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK043677|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	BC051418|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr16_+_94592359_94592368	0.504944	NKX3-2.p2	BC049277|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr2_+_174153230_174153414	0.503363	NKX3-2.p2	AK020895|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF124383|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK086715|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC062654|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY682719|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr8_-_88224652_88224792	0.501332	NKX3-2.p2	BC151050|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	BC157941|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	BC172104|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	BC172139|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	AK081462|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	AK017458|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2
mm9_v1_chr5_+_75971011_75971052	0.49898	NKX3-2.p2	NM_001122733|Kit|16590|kit oncogene	NM_021099|Kit|16590|kit oncogene	AK046795|Kit|16590|kit oncogene	AK047010|Kit|16590|kit oncogene	BC026713|Kit|16590|kit oncogene	BC075716|Kit|16590|kit oncogene	BC052457|Kit|16590|kit oncogene	Y00864|Kit|16590|kit oncogene	AY536430|Kit|16590|kit oncogene	AY536431|Kit|16590|kit oncogene
mm9_v1_chr9_+_19426674_19426747	0.49836	NKX3-2.p2	AK030030|Zfp317|244713|zinc finger protein 317
mm9_v1_chr5_-_5265598_5265717	0.497755	NKX3-2.p2	AK087398|Cdk14|18647|cyclin-dependent kinase 14	AK165149|Cdk14|18647|cyclin-dependent kinase 14	U62391|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr7_+_19469999_19470074	0.493762	NKX3-2.p2	BC005582|Pglyrp1|21946|peptidoglycan recognition protein 1	AF076482|Pglyrp1|21946|peptidoglycan recognition protein 1	AK008335|Pglyrp1|21946|peptidoglycan recognition protein 1	NM_009402|Pglyrp1|21946|peptidoglycan recognition protein 1	X86374|Pglyrp1|21946|peptidoglycan recognition protein 1	AK043227|Pglyrp1|21946|peptidoglycan recognition protein 1	AF193843|Pglyrp1|21946|peptidoglycan recognition protein 1	CT010165|Pglyrp1|21946|peptidoglycan recognition protein 1
mm9_v1_chr1_+_148344816_148344867	0.490502	NKX3-2.p2	NM_001145807|Fam5c|215378|family with sequence similarity 5, member C	AK083233|Fam5c|215378|family with sequence similarity 5, member C	BC030498|Fam5c|215378|family with sequence similarity 5, member C	AK140520|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr10_+_86241749_86241796	0.488367	NKX3-2.p2	NM_175331|Nt5dc3|103466|5'-nucleotidase domain containing 3	AK147488|Nt5dc3|103466|5'-nucleotidase domain containing 3	AK172248|Nt5dc3|103466|5'-nucleotidase domain containing 3
mm9_v1_chr13_-_99086890_99086960	0.48834	NKX3-2.p2	BC080837|Btf3|218490|basic transcription factor 3	BC008233|Btf3|218490|basic transcription factor 3	BC064010|Btf3|218490|basic transcription factor 3	NM_145455|Btf3|218490|basic transcription factor 3	AK160227|Btf3|218490|basic transcription factor 3	AK139664|Btf3|218490|basic transcription factor 3	AK147171|Btf3|218490|basic transcription factor 3	AK146332|Btf3|218490|basic transcription factor 3	NM_001170540|Btf3|218490|basic transcription factor 3
mm9_v1_chr18_+_35713033_35713097	0.487991	NKX3-2.p2	AK012754|Matr3|17184|matrin 3	AK041908|Matr3|17184|matrin 3	AK080350|Matr3|17184|matrin 3
mm9_v1_chr6_+_83129579_83129623	0.487923	NKX3-2.p2	AK162846|Dctn1|13191|dynactin 1	AK157867|Dctn1|13191|dynactin 1	NM_007835|Dctn1|13191|dynactin 1
mm9_v1_chr14_-_119498586_119498663	0.487497	NKX3-2.p2	AK038817|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2	AK052077|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2	NM_001081252|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2	AK048685|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2
mm9_v1_chr10_-_108448003_108448027	0.483237	NKX3-2.p2	BC048187|Syt1|20979|synaptotagmin I	AK019304|Syt1|20979|synaptotagmin I	AK048973|Syt1|20979|synaptotagmin I	AK133578|Syt1|20979|synaptotagmin I
mm9_v1_chr13_-_96902531_96902531	0.476647	NKX3-2.p2	AK173092|Sv2c|75209|synaptic vesicle glycoprotein 2c	NM_029210|Sv2c|75209|synaptic vesicle glycoprotein 2c
mm9_v1_chr14_-_20796411_20796481	0.474442	NKX3-2.p2	AK158697|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	NM_001038637|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	NM_010315|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2
mm9_v1_chr2_+_109731003_109731053	0.473774	NKX3-2.p2	AK135810|Lin7c|22343|lin-7 homolog C (C. elegans)	AK083299|Lin7c|22343|lin-7 homolog C (C. elegans)	AK015399|Lin7c|22343|lin-7 homolog C (C. elegans)	AK078923|Lin7c|22343|lin-7 homolog C (C. elegans)	AK128989|Lin7c|22343|lin-7 homolog C (C. elegans)	BC052471|Lin7c|22343|lin-7 homolog C (C. elegans)	AK133531|Lin7c|22343|lin-7 homolog C (C. elegans)	AF173083|Lin7c|22343|lin-7 homolog C (C. elegans)	AF087695|Lin7c|22343|lin-7 homolog C (C. elegans)	BC046966|Lin7c|22343|lin-7 homolog C (C. elegans)	NM_011699|Lin7c|22343|lin-7 homolog C (C. elegans)	AK161076|Lin7c|22343|lin-7 homolog C (C. elegans)
mm9_v1_chr7_-_117129643_117129675	0.471303	NKX3-2.p2	AK167021|Tmem41b|233724|transmembrane protein 41B	AK166845|Tmem41b|233724|transmembrane protein 41B
mm9_v1_chr2_+_71819264_71819343	0.46803	NKX3-2.p2	AK220281|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AB021132|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK161934|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK017479|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AF115480|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	BC139822|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	NM_019688|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr17_+_35958628_35958663	0.465863	NKX3-2.p2	AK051003|Ier3|15937|immediate early response 3	AK170477|Ier3|15937|immediate early response 3	AK003466|Ier3|15937|immediate early response 3	BC006950|Ier3|15937|immediate early response 3	NM_133662|Ier3|15937|immediate early response 3	CT010247|Ier3|15937|immediate early response 3	CT010271|Ier3|15937|immediate early response 3
mm9_v1_chr16_+_23107828_23107844	0.458999	NKX3-2.p2	X12507|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK076509|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK132969|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK165898|Eif4a2|13682|eukaryotic translation initiation factor 4A2	AK088669|Eif4a2|13682|eukaryotic translation initiation factor 4A2	BC094422|Eif4a2|13682|eukaryotic translation initiation factor 4A2
mm9_v1_chr6_+_53523365_53523387	0.457737	NKX3-2.p2	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr19_-_18706239_18706339	0.456378	NKX3-2.p2	AK008123|Ostf1|20409|osteoclast stimulating factor 1	AK008467|Ostf1|20409|osteoclast stimulating factor 1	U58888|Ostf1|20409|osteoclast stimulating factor 1	AK145949|Ostf1|20409|osteoclast stimulating factor 1	AK005525|Ostf1|20409|osteoclast stimulating factor 1	AK150145|Ostf1|20409|osteoclast stimulating factor 1	AK155028|Ostf1|20409|osteoclast stimulating factor 1	AK149175|Ostf1|20409|osteoclast stimulating factor 1	AK002899|Ostf1|20409|osteoclast stimulating factor 1	AK010074|Ostf1|20409|osteoclast stimulating factor 1	NM_017375|Ostf1|20409|osteoclast stimulating factor 1
mm9_v1_chr1_-_33964439_33964706	0.455896	NKX3-2.p2	BC057378|Bend6|320705|BEN domain containing 6	NM_177235|Bend6|320705|BEN domain containing 6	AK134655|Bend6|320705|BEN domain containing 6	AK044633|Bend6|320705|BEN domain containing 6	BC042757|Bend6|320705|BEN domain containing 6
mm9_v1_chr3_-_81878554_81878643	0.455084	NKX3-2.p2	AK147128|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	AK139406|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	AF020339|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	AF297083|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	BC050945|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	BC056995|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	NM_001161796|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3	NM_017469|Gucy1b3|54195|guanylate cyclase 1, soluble, beta 3
mm9_v1_chr18_+_23468585_23468619	0.453856	NKX3-2.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr1_+_89652645_89652774	0.453512	NKX3-2.p2	AK030983|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	NM_029846|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK145673|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK155358|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK163246|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK170073|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	BC049122|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK048873|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK005181|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087879|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087880|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087881|Atg16l1|77040|autophagy-related 16-like 1 (yeast)
mm9_v1_chr11_+_51577152_51577250	0.45263	NKX3-2.p2	NM_025535|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK002327|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK155429|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC082550|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK150906|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC085178|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK013559|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)
mm9_v1_chr7_-_96666035_96666071	0.449959	NKX3-2.p2	AK009847|Prss23|76453|protease, serine, 23	AK156348|Prss23|76453|protease, serine, 23	AK034439|Prss23|76453|protease, serine, 23	AK078518|Prss23|76453|protease, serine, 23	AK033671|Prss23|76453|protease, serine, 23
mm9_v1_chr2_-_77541328_77541435	0.446373	NKX3-2.p2	BC048543|Zfp385b|241494|zinc finger protein 385B	NM_001113399|Zfp385b|241494|zinc finger protein 385B	AK047859|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr16_+_94592307_94592357	0.445489	NKX3-2.p2	AK088273|Ttc3|22129|tetratricopeptide repeat domain 3	NM_009441|Ttc3|22129|tetratricopeptide repeat domain 3	AK053765|Ttc3|22129|tetratricopeptide repeat domain 3	AK170087|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr14_-_55735399_55735483	0.442716	NKX3-2.p2	AK033956|Jph4|319984|junctophilin 4	AK034118|Jph4|319984|junctophilin 4	AK036161|Jph4|319984|junctophilin 4	AK028257|Jph4|319984|junctophilin 4
mm9_v1_chr7_-_112748624_112748633	0.441166	NKX3-2.p2	AK145928|Hpx|15458|hemopexin	NM_017371|Hpx|15458|hemopexin
mm9_v1_chr8_+_98226914_98226962	0.437693	NKX3-2.p2	NM_001195006|Ndrg4|234593|N-myc downstream regulated gene 4	NM_145602|Ndrg4|234593|N-myc downstream regulated gene 4	AK168873|Ndrg4|234593|N-myc downstream regulated gene 4	AK090374|Ndrg4|234593|N-myc downstream regulated gene 4	AK144294|Ndrg4|234593|N-myc downstream regulated gene 4	BC006595|Ndrg4|234593|N-myc downstream regulated gene 4
mm9_v1_chr7_+_53651811_53651938	0.434706	NKX3-2.p2	NM_008421|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147476|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147682|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	NM_001112739|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chrX_-_140367467_140367853	0.429447	NKX3-2.p2	AY560329|Dcx|13193|doublecortin	AK048410|Dcx|13193|doublecortin	AF045547|Dcx|13193|doublecortin	AK164119|Dcx|13193|doublecortin	BC056391|Dcx|13193|doublecortin	AK049050|Dcx|13193|doublecortin	NM_001110222|Dcx|13193|doublecortin	BC057010|Dcx|13193|doublecortin	BC062974|Dcx|13193|doublecortin	AK014264|Dcx|13193|doublecortin	NM_001110223|Dcx|13193|doublecortin	NM_001110224|Dcx|13193|doublecortin	NM_010025|Dcx|13193|doublecortin	AB011678|Dcx|13193|doublecortin
mm9_v1_chr17_-_57367499_57367520	0.423022	NKX3-2.p2	BC043338|C3|12266|complement component 3	K02782|C3|12266|complement component 3
mm9_v1_chr16_-_94748040_94748080	0.421405	NKX3-2.p2	AK077628|Dscr3|13185|Down syndrome critical region gene 3	AB001990|Dscr3|13185|Down syndrome critical region gene 3	AK077485|Dscr3|13185|Down syndrome critical region gene 3
mm9_v1_chr8_+_46970814_46970842	0.421269	NKX3-2.p2	AF002283|Pdlim3|53318|PDZ and LIM domain 3	NM_016798|Pdlim3|53318|PDZ and LIM domain 3	AK078421|Pdlim3|53318|PDZ and LIM domain 3	AK141331|Pdlim3|53318|PDZ and LIM domain 3	AK164054|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr18_+_64425037_64425080	0.418774	NKX3-2.p2	AK134678|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	BC075645|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	AK133780|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	X80502|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm9_v1_chr4_+_144482722_144482729	0.416572	NKX3-2.p2	BC008980|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_001172424|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr6_+_96063137_96063148	0.41557	NKX3-2.p2	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr17_-_35089399_35089425	0.41552	NKX3-2.p2	BC058123|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene	AK003073|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene	AK004150|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene	AK002372|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene
mm9_v1_chr7_-_87468979_87469040	0.415478	NKX3-2.p2	AK088662|Rccd1|269955|RCC1 domain containing 1	AK084219|Rccd1|269955|RCC1 domain containing 1
mm9_v1_chr16_+_44394895_44394931	0.415343	NKX3-2.p2	BC100518|Wdr52|212517|WD repeat domain 52	NM_001033247|Wdr52|212517|WD repeat domain 52	BC050980|Wdr52|212517|WD repeat domain 52
mm9_v1_chr15_+_97998090_97998244	0.413404	NKX3-2.p2	AK080988|AI836003|239650|expressed sequence AI836003	NM_177716|AI836003|239650|expressed sequence AI836003
mm9_v1_chrX_-_45245608_45245760	0.406244	NKX3-2.p2	AK035068|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK030741|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK032978|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AK052092|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC016071|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	AF325920|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	BC057115|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	NM_053123|Smarca1|93761|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
mm9_v1_chr13_+_105077914_105078054	0.404808	NKX3-2.p2	AK030315|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	AK044528|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	NM_001081020|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	BC172116|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm9_v1_chr15_-_75397601_75397641	0.404731	NKX3-2.p2	NM_011837|Ly6h|23934|lymphocyte antigen 6 complex, locus H
mm9_v1_chr14_+_105657949_105657967	0.404273	NKX3-2.p2	AK132235|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr7_-_38554642_38554770	0.403173	NKX3-2.p2	AK122270|Zfp536|243937|zinc finger protein 536	AK030633|Zfp536|243937|zinc finger protein 536	NM_172385|Zfp536|243937|zinc finger protein 536
mm9_v1_chr15_-_103070291_103070312	0.401414	NKX3-2.p2	
mm9_v1_chr2_-_44968508_44968606	0.399691	NKX3-2.p2	AK158309|Zeb2|24136|zinc finger E-box binding homeobox 2	AK157561|Zeb2|24136|zinc finger E-box binding homeobox 2	BC060699|Zeb2|24136|zinc finger E-box binding homeobox 2	AK135557|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr15_-_51696910_51697018	0.397289	NKX3-2.p2	AK177719|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	BC014755|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	NM_080635|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK167651|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK003560|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	BC091728|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK149081|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK159113|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H
mm9_v1_chr8_+_108939247_108939300	0.394044	NKX3-2.p2	BC046230|Zfp90|22751|zinc finger protein 90	AK147423|Zfp90|22751|zinc finger protein 90	BC046298|Zfp90|22751|zinc finger protein 90	AK050519|Zfp90|22751|zinc finger protein 90	X79828|Zfp90|22751|zinc finger protein 90
mm9_v1_chr13_+_13876667_13876805	0.394008	NKX3-2.p2	BC016506|Gng4|14706|guanine nucleotide binding protein (G protein), gamma 4	NM_010317|Gng4|14706|guanine nucleotide binding protein (G protein), gamma 4
mm9_v1_chr19_-_6915038_6915131	0.393738	NKX3-2.p2	AK195314|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AF074714|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	NM_019924|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK089467|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK154674|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	BC012964|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4
mm9_v1_chr16_-_87432721_87432850	0.393589	NKX3-2.p2	AK173009|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK165062|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK036725|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK019706|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116272|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116273|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	NM_001081068|Ltn1|78913|listerin E3 ubiquitin protein ligase 1
mm9_v1_chr16_+_96366980_96367038	0.391355	NKX3-2.p2	AK084688|Wrb|71446|tryptophan rich basic protein	AK172079|Wrb|71446|tryptophan rich basic protein	BC031769|Wrb|71446|tryptophan rich basic protein	NM_207301|Wrb|71446|tryptophan rich basic protein	AK021091|Wrb|71446|tryptophan rich basic protein
mm9_v1_chr8_+_107850249_107850346	0.390237	NKX3-2.p2	NM_025486|Tmem208|66320|transmembrane protein 208	AK002499|Tmem208|66320|transmembrane protein 208	AK005662|Tmem208|66320|transmembrane protein 208	AK131833|Tmem208|66320|transmembrane protein 208	BC005665|Tmem208|66320|transmembrane protein 208	BC024608|Tmem208|66320|transmembrane protein 208	AK011635|Tmem208|66320|transmembrane protein 208
mm9_v1_chr8_+_120807674_120807696	0.385517	NKX3-2.p2	AK034995|Cdh13|12554|cadherin 13	AK085939|Cdh13|12554|cadherin 13	AK029195|Cdh13|12554|cadherin 13	AK134649|Cdh13|12554|cadherin 13
mm9_v1_chr10_+_84849558_84849599	0.385486	NKX3-2.p2	BC096535|Btbd11|74007|BTB (POZ) domain containing 11	NM_028709|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr11_+_71564204_71564204	0.385176	NKX3-2.p2	BC063070|Wscd1|216881|WSC domain containing 1	NM_177618|Wscd1|216881|WSC domain containing 1
mm9_v1_chr7_-_87469309_87469339	0.383596	NKX3-2.p2	AK030872|Rccd1|269955|RCC1 domain containing 1	BC069844|Rccd1|269955|RCC1 domain containing 1	AK088482|Rccd1|269955|RCC1 domain containing 1	NM_173445|Rccd1|269955|RCC1 domain containing 1
mm9_v1_chrX_+_71550562_71550629	0.383462	NKX3-2.p2	AK156224|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK036969|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK028880|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK171216|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	BC025606|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK032869|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	BC037598|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1
mm9_v1_chr14_-_20796199_20796254	0.381503	NKX3-2.p2	AK075698|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	AK160396|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	AK012405|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2
mm9_v1_chr4_-_56815114_56815205	0.379125	NKX3-2.p2	BC052387|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF140786|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK031367|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF367244|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF387811|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK035944|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	NM_026079|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK147153|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein
mm9_v1_chr13_+_55565627_55565671	0.378463	NKX3-2.p2	NM_001030296|Prr7|432763|proline rich 7 (synaptic)	AK133129|Prr7|432763|proline rich 7 (synaptic)
mm9_v1_chr8_+_108674263_108674491	0.378302	NKX3-2.p2	AK028614|Pla2g15|192654|phospholipase A2, group XV	BC019373|Pla2g15|192654|phospholipase A2, group XV	NM_133792|Pla2g15|192654|phospholipase A2, group XV	AK155004|Pla2g15|192654|phospholipase A2, group XV	AK085194|Pla2g15|192654|phospholipase A2, group XV	AK163111|Pla2g15|192654|phospholipase A2, group XV	AK170814|Pla2g15|192654|phospholipase A2, group XV	AF468958|Pla2g15|192654|phospholipase A2, group XV	AK180645|Pla2g15|192654|phospholipase A2, group XV	AK188333|Pla2g15|192654|phospholipase A2, group XV	AK205252|Pla2g15|192654|phospholipase A2, group XV	AK205480|Pla2g15|192654|phospholipase A2, group XV	AK207442|Pla2g15|192654|phospholipase A2, group XV	AK211077|Pla2g15|192654|phospholipase A2, group XV	AK212406|Pla2g15|192654|phospholipase A2, group XV	AK212507|Pla2g15|192654|phospholipase A2, group XV	AK212587|Pla2g15|192654|phospholipase A2, group XV	AK212623|Pla2g15|192654|phospholipase A2, group XV	AK215050|Pla2g15|192654|phospholipase A2, group XV	AK215274|Pla2g15|192654|phospholipase A2, group XV	AK217196|Pla2g15|192654|phospholipase A2, group XV	AK219754|Pla2g15|192654|phospholipase A2, group XV
mm9_v1_chr3_-_122322556_122322614	0.377754	NKX3-2.p2	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr6_-_60778740_60778989	0.376412	NKX3-2.p2	BC046764|Snca|20617|synuclein, alpha	AK156316|Snca|20617|synuclein, alpha	AK014472|Snca|20617|synuclein, alpha	AF033261|Snca|20617|synuclein, alpha	NM_001042451|Snca|20617|synuclein, alpha
mm9_v1_chr2_+_61884596_61884650	0.376243	NKX3-2.p2	AK043017|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	NM_033552|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	AK220501|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	HM149278|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	BC039226|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10	AB033759|Slc4a10|94229|solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
mm9_v1_chr4_+_84851330_84851416	0.371718	NKX3-2.p2	AK044370|Sh3gl2|20404|SH3-domain GRB2-like 2	BC018385|Sh3gl2|20404|SH3-domain GRB2-like 2	NM_019535|Sh3gl2|20404|SH3-domain GRB2-like 2	AK043424|Sh3gl2|20404|SH3-domain GRB2-like 2	AK139337|Sh3gl2|20404|SH3-domain GRB2-like 2	U58886|Sh3gl2|20404|SH3-domain GRB2-like 2
mm9_v1_chr8_+_120807621_120807654	0.371531	NKX3-2.p2	AK032409|Cdh13|12554|cadherin 13	AK039438|Cdh13|12554|cadherin 13	AB022100|Cdh13|12554|cadherin 13	BC021628|Cdh13|12554|cadherin 13	AK045201|Cdh13|12554|cadherin 13	AK048724|Cdh13|12554|cadherin 13	NM_019707|Cdh13|12554|cadherin 13
mm9_v1_chr10_-_128082881_128083048	0.370721	NKX3-2.p2	AK089522|Ikzf4|22781|IKAROS family zinc finger 4	AK170453|Ikzf4|22781|IKAROS family zinc finger 4	NM_011772|Ikzf4|22781|IKAROS family zinc finger 4
mm9_v1_chr11_+_56825258_56825293	0.369885	NKX3-2.p2	X57497|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr14_-_52898915_52898939	0.36955	NKX3-2.p2	AB232586|Rab2b|76338|RAB2B, member RAS oncogene family	AK160351|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chrX_-_131285919_131285957	0.368754	NKX3-2.p2	BC027264|Armcx6|278097|armadillo repeat containing, X-linked 6	AK148507|Armcx6|278097|armadillo repeat containing, X-linked 6	AK160766|Armcx6|278097|armadillo repeat containing, X-linked 6	NM_001007578|Armcx6|278097|armadillo repeat containing, X-linked 6
mm9_v1_chr7_-_133943848_133943969	0.364667	NKX3-2.p2	AK154295|Aldoa|11674|aldolase A, fructose-bisphosphate	NM_001177308|Aldoa|11674|aldolase A, fructose-bisphosphate
mm9_v1_chr13_+_54605152_54605165	0.364273	NKX3-2.p2	NM_176987|4732471D19Rik|319719|RIKEN cDNA 4732471D19 gene
mm9_v1_chr14_+_25309938_25309954	0.361427	NKX3-2.p2	AK002495|Rps24|20088|ribosomal protein S24	AK005358|Rps24|20088|ribosomal protein S24	AK007776|Rps24|20088|ribosomal protein S24	AK008386|Rps24|20088|ribosomal protein S24	AK009048|Rps24|20088|ribosomal protein S24	AK010856|Rps24|20088|ribosomal protein S24	AK018704|Rps24|20088|ribosomal protein S24	AK052480|Rps24|20088|ribosomal protein S24	BC086882|Rps24|20088|ribosomal protein S24	AK151111|Rps24|20088|ribosomal protein S24	AK049387|Rps24|20088|ribosomal protein S24	AK135247|Rps24|20088|ribosomal protein S24	AK012537|Rps24|20088|ribosomal protein S24	BC058817|Rps24|20088|ribosomal protein S24
mm9_v1_chr11_+_71564481_71564540	0.359669	NKX3-2.p2	BC030477|Wscd1|216881|WSC domain containing 1
mm9_v1_chr5_+_117807290_117807469	0.359204	NKX3-2.p2	AK080976|Wsb2|59043|WD repeat and SOCS box-containing 2	BC055100|Wsb2|59043|WD repeat and SOCS box-containing 2	NM_021539|Wsb2|59043|WD repeat and SOCS box-containing 2	AK157999|Wsb2|59043|WD repeat and SOCS box-containing 2	AF072881|Wsb2|59043|WD repeat and SOCS box-containing 2	AF033188|Wsb2|59043|WD repeat and SOCS box-containing 2
mm9_v1_chr17_-_45710213_45710219	0.358395	NKX3-2.p2	AK030768|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK084097|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK135366|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK146205|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr3_-_95032039_95032230	0.357673	NKX3-2.p2	BC022963|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AK046005|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	U95498|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AB000733|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	AK158495|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm9_v1_chr7_+_98239230_98239295	0.357629	NKX3-2.p2	NM_011807|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr2_-_131178551_131178627	0.35643	NKX3-2.p2	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr7_+_54101157_54101223	0.355473	NKX3-2.p2	NM_010699|Ldha|16828|lactate dehydrogenase A	AK168920|Ldha|16828|lactate dehydrogenase A	AK089929|Ldha|16828|lactate dehydrogenase A	AK146121|Ldha|16828|lactate dehydrogenase A	AK150156|Ldha|16828|lactate dehydrogenase A	AK167789|Ldha|16828|lactate dehydrogenase A	AK167944|Ldha|16828|lactate dehydrogenase A	AK168346|Ldha|16828|lactate dehydrogenase A	AK170386|Ldha|16828|lactate dehydrogenase A	AK171373|Ldha|16828|lactate dehydrogenase A	AK170708|Ldha|16828|lactate dehydrogenase A	AK149919|Ldha|16828|lactate dehydrogenase A	BC094428|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr18_-_33623273_33623276	0.35486	NKX3-2.p2	AK051015|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr8_+_63111621_63111675	0.354732	NKX3-2.p2	AK089654|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_027756|Mfap3l|71306|microfibrillar-associated protein 3-like	BC095950|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr12_+_38607291_38607482	0.354521	NKX3-2.p2	AK139408|Dgkb|217480|diacylglycerol kinase, beta	NM_178681|Dgkb|217480|diacylglycerol kinase, beta	AK083222|Dgkb|217480|diacylglycerol kinase, beta	AK047682|Dgkb|217480|diacylglycerol kinase, beta	AK044516|Dgkb|217480|diacylglycerol kinase, beta
mm9_v1_chr4_+_144482979_144483095	0.35449	NKX3-2.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr18_-_43847193_43847252	0.353845	NKX3-2.p2	AK143449|Jakmip2|76217|janus kinase and microtubule interacting protein 2	AK051838|Jakmip2|76217|janus kinase and microtubule interacting protein 2
mm9_v1_chr9_+_108984968_108985054	0.352634	NKX3-2.p2	AK137013|Ccdc51|66658|coiled-coil domain containing 51	AK141240|Ccdc51|66658|coiled-coil domain containing 51	NM_025689|Ccdc51|66658|coiled-coil domain containing 51	AK017860|Ccdc51|66658|coiled-coil domain containing 51
mm9_v1_chr17_-_71339826_71339901	0.351595	NKX3-2.p2	BC099425|Myl12b|67938|myosin, light chain 12B, regulatory	BC131925|Myl12b|67938|myosin, light chain 12B, regulatory	BC131927|Myl12b|67938|myosin, light chain 12B, regulatory	BC028878|Myl12b|67938|myosin, light chain 12B, regulatory	AK002885|Myl12b|67938|myosin, light chain 12B, regulatory	AK168316|Myl12b|67938|myosin, light chain 12B, regulatory	NM_023402|Myl12b|67938|myosin, light chain 12B, regulatory	AK146115|Myl12b|67938|myosin, light chain 12B, regulatory	AK005133|Myl12b|67938|myosin, light chain 12B, regulatory	AK160123|Myl12b|67938|myosin, light chain 12B, regulatory
mm9_v1_chr2_-_25316432_25316473	0.351239	NKX3-2.p2	AK046066|BC029214|227622|cDNA sequence BC029214
mm9_v1_chr19_-_38199291_38199302	0.349568	NKX3-2.p2	AK004839|Rbp4|19662|retinol binding protein 4, plasma	AK008765|Rbp4|19662|retinol binding protein 4, plasma	NM_011255|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr1_+_131170053_131170056	0.347487	NKX3-2.p2	AK083798|Thsd7b|210417|thrombospondin, type I, domain containing 7B
mm9_v1_chr10_-_121484248_121484370	0.347394	NKX3-2.p2	NM_001081037|Srgap1|117600|SLIT-ROBO Rho GTPase activating protein 1	BC120892|Srgap1|117600|SLIT-ROBO Rho GTPase activating protein 1	BC120893|Srgap1|117600|SLIT-ROBO Rho GTPase activating protein 1	AK138257|Srgap1|117600|SLIT-ROBO Rho GTPase activating protein 1
mm9_v1_chr5_-_75073816_75073896	0.346636	NKX3-2.p2	AF034746|Lnx1|16924|ligand of numb-protein X 1	BC139771|Lnx1|16924|ligand of numb-protein X 1	AK044127|Lnx1|16924|ligand of numb-protein X 1	BC040367|Lnx1|16924|ligand of numb-protein X 1	AK161194|Lnx1|16924|ligand of numb-protein X 1	AK138326|Lnx1|16924|ligand of numb-protein X 1	NM_001159578|Lnx1|16924|ligand of numb-protein X 1	NM_001159579|Lnx1|16924|ligand of numb-protein X 1	NM_001159580|Lnx1|16924|ligand of numb-protein X 1	NM_010727|Lnx1|16924|ligand of numb-protein X 1
mm9_v1_chr17_+_49071906_49072030	0.345177	NKX3-2.p2	BC139418|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	NM_027452|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK122476|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK044375|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2
mm9_v1_chr9_-_55785907_55785932	0.339311	NKX3-2.p2	AK031358|Scaper|244891|S phase cyclin A-associated protein in the ER	AK049497|Scaper|244891|S phase cyclin A-associated protein in the ER	NM_001081341|Scaper|244891|S phase cyclin A-associated protein in the ER	AK048755|Scaper|244891|S phase cyclin A-associated protein in the ER
mm9_v1_chr16_-_5222354_5222385	0.33829	NKX3-2.p2	BC150828|AU021092|239691|expressed sequence AU021092	BC171979|AU021092|239691|expressed sequence AU021092	AK140126|AU021092|239691|expressed sequence AU021092
mm9_v1_chr9_-_107612238_107612349	0.337069	NKX3-2.p2	AK140340|Sema3f|20350|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm9_v1_chr16_+_94592373_94592458	0.335492	NKX3-2.p2	AK165850|Ttc3|22129|tetratricopeptide repeat domain 3	AK166120|Ttc3|22129|tetratricopeptide repeat domain 3	BC019173|Ttc3|22129|tetratricopeptide repeat domain 3	BC057207|Ttc3|22129|tetratricopeptide repeat domain 3	AK084201|Ttc3|22129|tetratricopeptide repeat domain 3	AK166164|Ttc3|22129|tetratricopeptide repeat domain 3	AK166298|Ttc3|22129|tetratricopeptide repeat domain 3	AK089974|Ttc3|22129|tetratricopeptide repeat domain 3	BC037654|Ttc3|22129|tetratricopeptide repeat domain 3	AK220495|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chrX_-_35605626_35605657	0.335489	NKX3-2.p2	NM_172930|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chr6_-_98978185_98978383	0.335107	NKX3-2.p2	AK077062|Foxp1|108655|forkhead box P1	AK144920|Foxp1|108655|forkhead box P1	NM_001197322|Foxp1|108655|forkhead box P1
mm9_v1_chr12_+_81745188_81745226	0.334656	NKX3-2.p2	NM_026244|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK090062|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK080462|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	BC072655|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK008025|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr6_-_55631039_55631067	0.332914	NKX3-2.p2	AK144303|Neurod6|11922|neurogenic differentiation 6	BC087831|Neurod6|11922|neurogenic differentiation 6	U29086|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr9_-_107444181_107444195	0.331497	NKX3-2.p2	AK162586|Cyb561d2|56368|cytochrome b-561 domain containing 2	AK030225|Cyb561d2|56368|cytochrome b-561 domain containing 2	NM_019720|Cyb561d2|56368|cytochrome b-561 domain containing 2
mm9_v1_chr19_-_5688608_5688698	0.331406	NKX3-2.p2	AK171516|Pcnxl3|104401|pecanex-like 3 (Drosophila)
mm9_v1_chr15_+_3220994_3220998	0.329856	NKX3-2.p2	AK002450|Sepp1|20363|selenoprotein P, plasma, 1	AK077265|Sepp1|20363|selenoprotein P, plasma, 1	AK146774|Sepp1|20363|selenoprotein P, plasma, 1	AK148623|Sepp1|20363|selenoprotein P, plasma, 1	AK159269|Sepp1|20363|selenoprotein P, plasma, 1	AK159524|Sepp1|20363|selenoprotein P, plasma, 1	AK159911|Sepp1|20363|selenoprotein P, plasma, 1	AK159935|Sepp1|20363|selenoprotein P, plasma, 1	AK167611|Sepp1|20363|selenoprotein P, plasma, 1	AK168631|Sepp1|20363|selenoprotein P, plasma, 1	AK168747|Sepp1|20363|selenoprotein P, plasma, 1	AK168926|Sepp1|20363|selenoprotein P, plasma, 1	AK169011|Sepp1|20363|selenoprotein P, plasma, 1	AK169158|Sepp1|20363|selenoprotein P, plasma, 1	AK169362|Sepp1|20363|selenoprotein P, plasma, 1	AK159894|Sepp1|20363|selenoprotein P, plasma, 1	AK168583|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr3_-_80606598_80606626	0.328153	NKX3-2.p2	AK045738|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr10_+_89149113_89149139	0.328151	NKX3-2.p2	AK048993|1500026H17Rik|69002|RIKEN cDNA 1500026H17 gene	AK005299|1500026H17Rik|69002|RIKEN cDNA 1500026H17 gene	AK085365|1500026H17Rik|69002|RIKEN cDNA 1500026H17 gene
mm9_v1_chr8_+_26629214_26629332	0.327932	NKX3-2.p2	NM_001079908|Fgfr1|14182|fibroblast growth factor receptor 1	NM_001079909|Fgfr1|14182|fibroblast growth factor receptor 1	NM_010206|Fgfr1|14182|fibroblast growth factor receptor 1	AK049704|Fgfr1|14182|fibroblast growth factor receptor 1	S74765|Fgfr1|14182|fibroblast growth factor receptor 1	BC010200|Fgfr1|14182|fibroblast growth factor receptor 1
mm9_v1_chr2_+_28061156_28061215	0.327242	NKX3-2.p2	D78262|Olfm1|56177|olfactomedin 1	D78263|Olfm1|56177|olfactomedin 1	NM_001038612|Olfm1|56177|olfactomedin 1	NM_019498|Olfm1|56177|olfactomedin 1
mm9_v1_chr2_-_37286367_37286438	0.326927	NKX3-2.p2	BC032933|Zbtb6|241322|zinc finger and BTB domain containing 6	AK044125|Zbtb6|241322|zinc finger and BTB domain containing 6	AK050827|Zbtb6|241322|zinc finger and BTB domain containing 6	NM_146253|Zbtb6|241322|zinc finger and BTB domain containing 6
mm9_v1_chr2_+_26934862_26934948	0.326137	NKX3-2.p2	AK156991|Adamtsl2|77794|ADAMTS-like 2	AB096928|Adamtsl2|77794|ADAMTS-like 2	NM_029981|Adamtsl2|77794|ADAMTS-like 2	BC128568|Adamtsl2|77794|ADAMTS-like 2	BC129984|Adamtsl2|77794|ADAMTS-like 2
mm9_v1_chr7_-_86877026_86877059	0.326082	NKX3-2.p2	AY161165|Plin1|103968|perilipin 1	AK031445|Plin1|103968|perilipin 1
mm9_v1_chr4_+_111087610_111087629	0.325877	NKX3-2.p2	AK075885|Bend5|67621|BEN domain containing 5	NM_026279|Bend5|67621|BEN domain containing 5	AK014057|Bend5|67621|BEN domain containing 5
mm9_v1_chr13_+_54676356_54676474	0.325655	NKX3-2.p2	NM_019968|Arl10|56795|ADP-ribosylation factor-like 10	AK154684|Arl10|56795|ADP-ribosylation factor-like 10	AF205936|Arl10|56795|ADP-ribosylation factor-like 10	BC115498|Arl10|56795|ADP-ribosylation factor-like 10
mm9_v1_chr19_-_42055588_42055632	0.32466	NKX3-2.p2	BC018614|Mms19|72199|MMS19 (MET18 S. cerevisiae)	BC050817|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK036983|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AF319949|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK011754|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK078688|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK028317|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK030619|Mms19|72199|MMS19 (MET18 S. cerevisiae)	NM_028152|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK087633|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK010326|Mms19|72199|MMS19 (MET18 S. cerevisiae)
mm9_v1_chr12_+_110779204_110779231	0.323268	NKX3-2.p2	AK145456|Meg3|17263|maternally expressed 3	AK155982|Meg3|17263|maternally expressed 3	AK157178|Meg3|17263|maternally expressed 3	Y13832|Meg3|17263|maternally expressed 3	BC094421|Meg3|17263|maternally expressed 3
mm9_v1_chr1_+_70772288_70772496	0.32315	NKX3-2.p2	BC094541|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	NM_177164|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK083856|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	BC064448|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK080585|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like
mm9_v1_chrM_+_11741_11742	0.322813	NKX3-2.p2	AK140457|ND5|17721|NADH dehydrogenase subunit 5
mm9_v1_chr8_-_118230828_118230997	0.320746	NKX3-2.p2	AK151738|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	AK152074|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr6_+_122824491_122824588	0.320703	NKX3-2.p2	BC119133|Necap1|67602|NECAP endocytosis associated 1	BC120841|Necap1|67602|NECAP endocytosis associated 1	AK004805|Necap1|67602|NECAP endocytosis associated 1	AK081598|Necap1|67602|NECAP endocytosis associated 1	AK168500|Necap1|67602|NECAP endocytosis associated 1	NM_026267|Necap1|67602|NECAP endocytosis associated 1	BC011466|Necap1|67602|NECAP endocytosis associated 1	AK005263|Necap1|67602|NECAP endocytosis associated 1	BC098227|Necap1|67602|NECAP endocytosis associated 1	AK220236|Necap1|67602|NECAP endocytosis associated 1
mm9_v1_chr9_+_117949578_117949817	0.320385	NKX3-2.p2	NM_001048146|Azi2|27215|5-azacytidine induced gene 2	NM_013727|Azi2|27215|5-azacytidine induced gene 2	AK004992|Azi2|27215|5-azacytidine induced gene 2	AK165549|Azi2|27215|5-azacytidine induced gene 2	AK153477|Azi2|27215|5-azacytidine induced gene 2	AK167783|Azi2|27215|5-azacytidine induced gene 2	AK036102|Azi2|27215|5-azacytidine induced gene 2	AK134714|Azi2|27215|5-azacytidine induced gene 2	BC006851|Azi2|27215|5-azacytidine induced gene 2	AB007141|Azi2|27215|5-azacytidine induced gene 2	AK030076|Azi2|27215|5-azacytidine induced gene 2	AK015942|Azi2|27215|5-azacytidine induced gene 2
mm9_v1_chr1_+_17135421_17135611	0.320166	NKX3-2.p2	AK149281|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK083814|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	NM_010267|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK045460|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	Y17850|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK020988|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC048177|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC060212|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK049655|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC051135|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK139057|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1
mm9_v1_chr7_+_108257288_108257396	0.318434	NKX3-2.p2	AK141949|Fchsd2|207278|FCH and double SH3 domains 2	NM_001146010|Fchsd2|207278|FCH and double SH3 domains 2	NM_199012|Fchsd2|207278|FCH and double SH3 domains 2	BC016532|Fchsd2|207278|FCH and double SH3 domains 2	AK140322|Fchsd2|207278|FCH and double SH3 domains 2	AK157054|Fchsd2|207278|FCH and double SH3 domains 2	AK156841|Fchsd2|207278|FCH and double SH3 domains 2	BC060647|Fchsd2|207278|FCH and double SH3 domains 2	AK165341|Fchsd2|207278|FCH and double SH3 domains 2	AK122368|Fchsd2|207278|FCH and double SH3 domains 2
mm9_v1_chr9_-_58160966_58161035	0.317241	NKX3-2.p2	BC098243|Loxl1|16949|lysyl oxidase-like 1	BC037999|Loxl1|16949|lysyl oxidase-like 1	AK078512|Loxl1|16949|lysyl oxidase-like 1	NM_010729|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr5_+_138422718_138422792	0.316609	NKX3-2.p2	NM_013478|Azgp1|12007|alpha-2-glycoprotein 1, zinc	AK005051|Azgp1|12007|alpha-2-glycoprotein 1, zinc	BC061646|Azgp1|12007|alpha-2-glycoprotein 1, zinc	AY248694|Azgp1|12007|alpha-2-glycoprotein 1, zinc	D21059|Azgp1|12007|alpha-2-glycoprotein 1, zinc
mm9_v1_chr15_-_8660462_8660476	0.314237	NKX3-2.p2	AK031831|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK040798|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK049090|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK082736|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U75377|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chrX_-_163647088_163647149	0.313092	NKX3-2.p2	AK010659|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK088783|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK162286|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169718|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169108|Tmsb4x|19241|thymosin, beta 4, X chromosome	NM_021278|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr2_-_91023154_91023203	0.311984	NKX3-2.p2	AK035777|Madd|228355|MAP-kinase activating death domain	AK036347|Madd|228355|MAP-kinase activating death domain	NM_001177719|Madd|228355|MAP-kinase activating death domain	NM_145527|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr6_-_77929685_77929694	0.311656	NKX3-2.p2	AK158916|Ctnna2|12386|catenin (cadherin associated protein), alpha 2
mm9_v1_chr7_-_54387915_54388047	0.311612	NKX3-2.p2	NM_001163565|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	BC079592|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr2_+_91898868_91898884	0.311573	NKX3-2.p2	
mm9_v1_chr11_-_115128540_115128560	0.310868	NKX3-2.p2	NM_010350|Grin2c|14813|glutamate receptor, ionotropic, NMDA2C (epsilon 3)
mm9_v1_chr7_-_133819870_133819892	0.309357	NKX3-2.p2	BC005413|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	NM_133670|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	L02331|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	AK002700|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1
mm9_v1_chr5_-_144288812_144288864	0.308049	NKX3-2.p2	BC051053|Rac1|19353|RAS-related C3 botulinum substrate 1	BC003828|Rac1|19353|RAS-related C3 botulinum substrate 1	AK008435|Rac1|19353|RAS-related C3 botulinum substrate 1	AK009017|Rac1|19353|RAS-related C3 botulinum substrate 1	AK011072|Rac1|19353|RAS-related C3 botulinum substrate 1	AK034601|Rac1|19353|RAS-related C3 botulinum substrate 1	AK166383|Rac1|19353|RAS-related C3 botulinum substrate 1	NM_009007|Rac1|19353|RAS-related C3 botulinum substrate 1	AK047969|Rac1|19353|RAS-related C3 botulinum substrate 1
mm9_v1_chr16_+_49855691_49855777	0.307612	NKX3-2.p2	NM_010581|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	Z25524|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr9_-_100471461_100471511	0.306903	NKX3-2.p2	NM_001101483|Tmem22|245020|transmembrane protein 22
mm9_v1_chr3_+_13946371_13946410	0.303721	NKX3-2.p2	NM_001163329|Ralyl|76897|RALY RNA binding protein-like	NM_001163330|Ralyl|76897|RALY RNA binding protein-like	AK038465|Ralyl|76897|RALY RNA binding protein-like	BC052358|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr7_+_87414580_87414642	0.303648	NKX3-2.p2	AK134927|Vps33b|233405|vacuolar protein sorting 33B (yeast)
mm9_v1_chr5_-_24414236_24414326	0.302748	NKX3-2.p2	AY348864|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	AK165834|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	AK010703|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_001170555|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_001170556|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr9_-_96264747_96264751	0.301666	NKX3-2.p2	AK161282|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chr2_-_79296732_79296799	0.3014	NKX3-2.p2	BC094611|Neurod1|18012|neurogenic differentiation 1	BC018241|Neurod1|18012|neurogenic differentiation 1	AK018781|Neurod1|18012|neurogenic differentiation 1	AK005073|Neurod1|18012|neurogenic differentiation 1	NM_010894|Neurod1|18012|neurogenic differentiation 1	AK028055|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr2_+_145686377_145686454	0.300084	NKX3-2.p2	AK014548|Rin2|74030|Ras and Rab interactor 2	AK040763|Rin2|74030|Ras and Rab interactor 2	AK152025|Rin2|74030|Ras and Rab interactor 2	BC005529|Rin2|74030|Ras and Rab interactor 2	AK154421|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr7_+_134388006_134388047	0.299183	NKX3-2.p2	AK090240|Zfp771|244216|zinc finger protein 771	NM_177362|Zfp771|244216|zinc finger protein 771	AK159461|Zfp771|244216|zinc finger protein 771
mm9_v1_chr5_-_137359032_137359078	0.29879	NKX3-2.p2	AK143515|Emid2|140709|EMI domain containing 2	AB085837|Emid2|140709|EMI domain containing 2	AK079128|Emid2|140709|EMI domain containing 2
mm9_v1_chr18_-_33623287_33623340	0.298521	NKX3-2.p2	NM_053078|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr2_-_180869796_180869941	0.298199	NKX3-2.p2	AF490773|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000494|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000495|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000496|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000497|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000498|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000499|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000500|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000501|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000502|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000503|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000504|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	BC145453|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001003824|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001003825|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006668|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006669|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006674|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006675|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006676|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006677|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006678|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006679|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006680|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_010611|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2
mm9_v1_chr14_-_21613162_21613325	0.298105	NKX3-2.p2	AF395884|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK154764|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC025597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK078311|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC019162|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK081969|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK031213|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK054406|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039138|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039139|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_178597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma
mm9_v1_chr18_+_59222034_59222186	0.29602	NKX3-2.p2	NM_001167925|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	NM_173759|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK080452|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK048493|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	BC075669|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene
mm9_v1_chr2_-_60047891_60047922	0.29573	NKX3-2.p2	AK171175|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr8_+_96561097_96561129	0.294653	NKX3-2.p2	AK029629|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_001093757|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_177767|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK156765|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr15_-_79158683_79158800	0.293319	NKX3-2.p2	NM_001199023|Pla2g6|53357|phospholipase A2, group VI	NM_001199024|Pla2g6|53357|phospholipase A2, group VI	NM_001199025|Pla2g6|53357|phospholipase A2, group VI	NM_016915|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr4_+_154998999_154999010	0.293226	NKX3-2.p2	AK147133|Cdk11b|12537|cyclin-dependent kinase 11B	AK008283|Cdk11b|12537|cyclin-dependent kinase 11B	AK171785|Cdk11b|12537|cyclin-dependent kinase 11B
mm9_v1_chr5_-_143668403_143668403	0.292266	NKX3-2.p2	AK078935|Actb|11461|actin, beta	AK145191|Actb|11461|actin, beta	AK145196|Actb|11461|actin, beta	AK145308|Actb|11461|actin, beta	AK149920|Actb|11461|actin, beta	AK150545|Actb|11461|actin, beta	AK150553|Actb|11461|actin, beta	AK150558|Actb|11461|actin, beta	AK150570|Actb|11461|actin, beta	AK150711|Actb|11461|actin, beta	AK150879|Actb|11461|actin, beta	AK151136|Actb|11461|actin, beta	AK151159|Actb|11461|actin, beta	AK151190|Actb|11461|actin, beta	AK151202|Actb|11461|actin, beta	AK151297|Actb|11461|actin, beta	AK151385|Actb|11461|actin, beta	AK151398|Actb|11461|actin, beta	AK151444|Actb|11461|actin, beta	AK151663|Actb|11461|actin, beta	AK151995|Actb|11461|actin, beta	AK151999|Actb|11461|actin, beta	AK152083|Actb|11461|actin, beta	AK152218|Actb|11461|actin, beta	AK152615|Actb|11461|actin, beta	AK152651|Actb|11461|actin, beta	AK152671|Actb|11461|actin, beta	AK152813|Actb|11461|actin, beta	AK152841|Actb|11461|actin, beta	AK166349|Actb|11461|actin, beta	AK166498|Actb|11461|actin, beta	AK167117|Actb|11461|actin, beta	AK167825|Actb|11461|actin, beta	AK167960|Actb|11461|actin, beta
mm9_v1_chr19_-_5510453_5510506	0.291685	NKX3-2.p2	AK047234|Snx32|225861|sorting nexin 32	BC048922|Snx32|225861|sorting nexin 32	NM_001024560|Snx32|225861|sorting nexin 32	AK037118|Snx32|225861|sorting nexin 32	AK143441|Snx32|225861|sorting nexin 32
mm9_v1_chr1_-_64167574_64167617	0.289306	NKX3-2.p2	AB221646|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr2_-_180869947_180869970	0.289165	NKX3-2.p2	AK161558|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2
mm9_v1_chr15_-_9678531_9678622	0.287251	NKX3-2.p2	AK041992|Spef2|320277|sperm flagellar 2	BC132098|Spef2|320277|sperm flagellar 2	BC132288|Spef2|320277|sperm flagellar 2	NM_177123|Spef2|320277|sperm flagellar 2	AK048961|Spef2|320277|sperm flagellar 2
mm9_v1_chr1_-_54614455_54614507	0.286222	NKX3-2.p2	AK138171|Pgap1|241062|post-GPI attachment to proteins 1	AK051360|Pgap1|241062|post-GPI attachment to proteins 1
mm9_v1_chrX_+_20539226_20539259	0.284162	NKX3-2.p2	AK038883|A230072C01Rik|320742|RIKEN cDNA A230072C01 gene
mm9_v1_chr8_-_127245800_127245897	0.2836	NKX3-2.p2	AK212172|Ttc13|234875|tetratricopeptide repeat domain 13	BC079851|Ttc13|234875|tetratricopeptide repeat domain 13	BC072577|Ttc13|234875|tetratricopeptide repeat domain 13	AK148102|Ttc13|234875|tetratricopeptide repeat domain 13	AK144842|Ttc13|234875|tetratricopeptide repeat domain 13	NM_145607|Ttc13|234875|tetratricopeptide repeat domain 13	AK051200|Ttc13|234875|tetratricopeptide repeat domain 13	AK160894|Ttc13|234875|tetratricopeptide repeat domain 13
mm9_v1_chr9_-_107673268_107673286	0.283008	NKX3-2.p2	BC043058|Rbm5|83486|RNA binding motif protein 5	BC019766|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chrX_+_133276377_133276400	0.282754	NKX3-2.p2	AK160692|BC065397|436230|cDNA sequence BC065397
mm9_v1_chr2_+_121239658_121239718	0.282495	NKX3-2.p2	AK132459|Pdia3|14827|protein disulfide isomerase associated 3	AK088721|Pdia3|14827|protein disulfide isomerase associated 3	AK133799|Pdia3|14827|protein disulfide isomerase associated 3	AK167807|Pdia3|14827|protein disulfide isomerase associated 3	AK169611|Pdia3|14827|protein disulfide isomerase associated 3	M73329|Pdia3|14827|protein disulfide isomerase associated 3	BC003285|Pdia3|14827|protein disulfide isomerase associated 3
mm9_v1_chr10_-_70747929_70748034	0.281478	NKX3-2.p2	AK144468|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	AK043167|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	BC019464|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	AK148364|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	NM_145420|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)
mm9_v1_chr8_+_85913750_85913789	0.281263	NKX3-2.p2	AK019534|Clgn|12745|calmegin	AK034525|Clgn|12745|calmegin	D14117|Clgn|12745|calmegin	D86323|Clgn|12745|calmegin	U08373|Clgn|12745|calmegin	BC050767|Clgn|12745|calmegin	NM_009904|Clgn|12745|calmegin
mm9_v1_chr14_-_49685853_49686079	0.280725	NKX3-2.p2	AK134562|Exoc5|105504|exocyst complex component 5	BC049967|Exoc5|105504|exocyst complex component 5	AK167145|Exoc5|105504|exocyst complex component 5	AK170148|Exoc5|105504|exocyst complex component 5	AK157473|Exoc5|105504|exocyst complex component 5	AK171012|Exoc5|105504|exocyst complex component 5	AK164067|Exoc5|105504|exocyst complex component 5	AK152307|Exoc5|105504|exocyst complex component 5
mm9_v1_chr11_-_62270802_62270811	0.280566	NKX3-2.p2	BC029627|Ncor1|20185|nuclear receptor co-repressor 1	BC062162|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr9_-_123760992_123761028	0.280529	NKX3-2.p2	AK081259|Fyco1|17281|FYVE and coiled-coil domain containing 1	AK013060|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_001110253|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chr4_+_43575487_43575594	0.280327	NKX3-2.p2	AK132785|Creb3|12913|cAMP responsive element binding protein 3	AK144208|Creb3|12913|cAMP responsive element binding protein 3	NM_013497|Creb3|12913|cAMP responsive element binding protein 3	AK090077|Creb3|12913|cAMP responsive element binding protein 3	BC002094|Creb3|12913|cAMP responsive element binding protein 3
mm9_v1_chr6_-_72389491_72389552	0.280318	NKX3-2.p2	BC003451|Mat2a|232087|methionine adenosyltransferase II, alpha	AB070266|Mat2a|232087|methionine adenosyltransferase II, alpha	BC058360|Mat2a|232087|methionine adenosyltransferase II, alpha	AK145407|Mat2a|232087|methionine adenosyltransferase II, alpha	AK052764|Mat2a|232087|methionine adenosyltransferase II, alpha	AK133960|Mat2a|232087|methionine adenosyltransferase II, alpha	AK144189|Mat2a|232087|methionine adenosyltransferase II, alpha	AK150040|Mat2a|232087|methionine adenosyltransferase II, alpha	AK151281|Mat2a|232087|methionine adenosyltransferase II, alpha	AK160869|Mat2a|232087|methionine adenosyltransferase II, alpha	AK161852|Mat2a|232087|methionine adenosyltransferase II, alpha	AK164137|Mat2a|232087|methionine adenosyltransferase II, alpha	AK166671|Mat2a|232087|methionine adenosyltransferase II, alpha	AK168155|Mat2a|232087|methionine adenosyltransferase II, alpha	AK169705|Mat2a|232087|methionine adenosyltransferase II, alpha	AK034757|Mat2a|232087|methionine adenosyltransferase II, alpha	NM_145569|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr2_-_121097017_121097133	0.279206	NKX3-2.p2	AK045851|Trp53bp1|27223|transformation related protein 53 binding protein 1	BC079906|Trp53bp1|27223|transformation related protein 53 binding protein 1	AK045077|Trp53bp1|27223|transformation related protein 53 binding protein 1	AK148123|Trp53bp1|27223|transformation related protein 53 binding protein 1	BC037378|Trp53bp1|27223|transformation related protein 53 binding protein 1	NM_013735|Trp53bp1|27223|transformation related protein 53 binding protein 1
mm9_v1_chr17_-_13108931_13109013	0.278757	NKX3-2.p2	BC011425|Mrpl18|67681|mitochondrial ribosomal protein L18	AK008680|Mrpl18|67681|mitochondrial ribosomal protein L18	NM_026310|Mrpl18|67681|mitochondrial ribosomal protein L18	AK003104|Mrpl18|67681|mitochondrial ribosomal protein L18	AK010150|Mrpl18|67681|mitochondrial ribosomal protein L18
mm9_v1_chr19_+_8994860_8994941	0.277971	NKX3-2.p2	AK144402|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC004038|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	NM_024256|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK048428|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC012930|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK140424|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
mm9_v1_chr2_-_60047804_60047888	0.27734	NKX3-2.p2	AK166079|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chrX_-_34529439_34529513	0.27633	NKX3-2.p2	AB023622|Sept6|56526|septin 6	AK088614|Sept6|56526|septin 6	AK088406|Sept6|56526|septin 6	AK172894|Sept6|56526|septin 6	BC010489|Sept6|56526|septin 6	AK012858|Sept6|56526|septin 6	AK160884|Sept6|56526|septin 6	AK083302|Sept6|56526|septin 6	AK162755|Sept6|56526|septin 6	AK048455|Sept6|56526|septin 6	NM_001177323|Sept6|56526|septin 6
mm9_v1_chr1_+_62750471_62750778	0.274373	NKX3-2.p2	AK153553|Nrp2|18187|neuropilin 2	BC057028|Nrp2|18187|neuropilin 2	BC098200|Nrp2|18187|neuropilin 2	AF483506|Nrp2|18187|neuropilin 2	AF483507|Nrp2|18187|neuropilin 2
mm9_v1_chr5_-_144288868_144288935	0.27287	NKX3-2.p2	AK088825|Rac1|19353|RAS-related C3 botulinum substrate 1	AK076023|Rac1|19353|RAS-related C3 botulinum substrate 1
mm9_v1_chr10_+_105011586_105011626	0.272802	NKX3-2.p2	AK034146|9330159K06|327812|hypothetical protein 9330159K06
mm9_v1_chr11_-_6100453_6100453	0.272288	NKX3-2.p2	NM_173748|Nudcd3|209586|NudC domain containing 3
mm9_v1_chrX_-_49033575_49033608	0.27186	NKX3-2.p2	AB024565|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	BC037659|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr10_+_127472624_127472720	0.271822	NKX3-2.p2	AK169432|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK146197|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AL355707|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK168023|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	U48364|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK146149|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK168169|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK151928|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK169435|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK161678|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC029830|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC083340|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK168607|Naca|17938|nascent polypeptide-associated complex alpha polypeptide
mm9_v1_chr1_-_173275736_173275801	0.271804	NKX3-2.p2	AK004988|Nit1|27045|nitrilase 1	BC021634|Nit1|27045|nitrilase 1	AF069988|Nit1|27045|nitrilase 1	AK002269|Nit1|27045|nitrilase 1	AK032189|Nit1|27045|nitrilase 1	NM_012049|Nit1|27045|nitrilase 1
mm9_v1_chr13_+_91600662_91600791	0.271177	NKX3-2.p2	BC002176|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024186|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024272|Ssbp2|66970|single-stranded DNA binding protein 2	AK133699|Ssbp2|66970|single-stranded DNA binding protein 2	AK051840|Ssbp2|66970|single-stranded DNA binding protein 2	AK010220|Ssbp2|66970|single-stranded DNA binding protein 2	AY037837|Ssbp2|66970|single-stranded DNA binding protein 2	AK005150|Ssbp2|66970|single-stranded DNA binding protein 2	AK013177|Ssbp2|66970|single-stranded DNA binding protein 2	AY167988|Ssbp2|66970|single-stranded DNA binding protein 2
mm9_v1_chr4_-_108506131_108506262	0.2708	NKX3-2.p2	BC024920|Btf3l4|70533|basic transcription factor 3-like 4	BC058282|Btf3l4|70533|basic transcription factor 3-like 4	AK011367|Btf3l4|70533|basic transcription factor 3-like 4	AK167256|Btf3l4|70533|basic transcription factor 3-like 4	BC138215|Btf3l4|70533|basic transcription factor 3-like 4	BC138216|Btf3l4|70533|basic transcription factor 3-like 4	BC024612|Btf3l4|70533|basic transcription factor 3-like 4	AK013120|Btf3l4|70533|basic transcription factor 3-like 4	AK076283|Btf3l4|70533|basic transcription factor 3-like 4	NM_027453|Btf3l4|70533|basic transcription factor 3-like 4	AK004239|Btf3l4|70533|basic transcription factor 3-like 4
mm9_v1_chr9_+_70055127_70055237	0.270591	NKX3-2.p2	AK009155|Myo1e|71602|myosin IE	AK009427|Myo1e|71602|myosin IE	AK029145|Myo1e|71602|myosin IE	NM_181072|Myo1e|71602|myosin IE	BC040786|Myo1e|71602|myosin IE	BC051391|Myo1e|71602|myosin IE
mm9_v1_chr1_-_45559904_45559916	0.269519	NKX3-2.p2	AK147220|Col5a2|12832|collagen, type V, alpha 2	AK080811|Col5a2|12832|collagen, type V, alpha 2	AK084285|Col5a2|12832|collagen, type V, alpha 2	AK132413|Col5a2|12832|collagen, type V, alpha 2	AK151929|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr4_-_107743887_107743940	0.26908	NKX3-2.p2	AK002425|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chr9_-_20757236_20757422	0.268544	NKX3-2.p2	AK013247|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	BC053047|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	BC048148|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	AK143578|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	X14805|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	AK147143|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	NM_010066|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	AF162282|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	U70051|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1
mm9_v1_chr4_-_41516463_41516600	0.268288	NKX3-2.p2	BC147810|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC147808|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC147834|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC147836|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC172167|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC172173|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	AK009522|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	AK134737|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	NM_001159583|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	NM_027993|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene
mm9_v1_chr1_+_134776927_134777014	0.267959	NKX3-2.p2	AK036271|Lrrn2|16980|leucine rich repeat protein 2, neuronal	AK039216|Lrrn2|16980|leucine rich repeat protein 2, neuronal	NM_010732|Lrrn2|16980|leucine rich repeat protein 2, neuronal
mm9_v1_chr19_+_7070609_7070822	0.267233	NKX3-2.p2	AK038830|Trpt1|107328|tRNA phosphotransferase 1	NM_153597|Trpt1|107328|tRNA phosphotransferase 1	AK090183|Trpt1|107328|tRNA phosphotransferase 1	AK141582|Trpt1|107328|tRNA phosphotransferase 1	BC027575|Trpt1|107328|tRNA phosphotransferase 1
mm9_v1_chr15_+_91881593_91881615	0.266083	NKX3-2.p2	AK138969|Cntn1|12805|contactin 1	NM_001159648|Cntn1|12805|contactin 1
mm9_v1_chr15_-_43701569_43701581	0.265709	NKX3-2.p2	BC076589|Tmem74|239408|transmembrane protein 74	AK046420|Tmem74|239408|transmembrane protein 74	NM_175502|Tmem74|239408|transmembrane protein 74	AK045145|Tmem74|239408|transmembrane protein 74
mm9_v1_chr18_-_46901117_46901234	0.264676	NKX3-2.p2	BC070470|Atg12|67526|autophagy-related 12 (yeast)	AB066216|Atg12|67526|autophagy-related 12 (yeast)	AK167027|Atg12|67526|autophagy-related 12 (yeast)	AK008698|Atg12|67526|autophagy-related 12 (yeast)	AK016474|Atg12|67526|autophagy-related 12 (yeast)	AK039278|Atg12|67526|autophagy-related 12 (yeast)	AK039546|Atg12|67526|autophagy-related 12 (yeast)	AK005405|Atg12|67526|autophagy-related 12 (yeast)	NM_026217|Atg12|67526|autophagy-related 12 (yeast)
mm9_v1_chr7_+_57230233_57230438	0.264246	NKX3-2.p2	AK032845|Nell1|338352|NEL-like 1 (chicken)
mm9_v1_chr1_-_33871218_33871259	0.26301	NKX3-2.p2	BC062154|Zfp451|98403|zinc finger protein 451
mm9_v1_chr12_+_74387798_74387894	0.262709	NKX3-2.p2	NM_001037717|Slc38a6|625098|solute carrier family 38, member 6	AK140045|Slc38a6|625098|solute carrier family 38, member 6	AK054341|Slc38a6|625098|solute carrier family 38, member 6	BC157917|Slc38a6|625098|solute carrier family 38, member 6	BC157928|Slc38a6|625098|solute carrier family 38, member 6
mm9_v1_chr5_+_98609872_98610052	0.262407	NKX3-2.p2	AK050852|Prdm8|77630|PR domain containing 8	NM_029947|Prdm8|77630|PR domain containing 8	AK036202|Prdm8|77630|PR domain containing 8	AK044713|Prdm8|77630|PR domain containing 8	BC141020|Prdm8|77630|PR domain containing 8
mm9_v1_chr9_-_49311823_49311910	0.261397	NKX3-2.p2	X07233|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr6_-_91757386_91757427	0.260074	NKX3-2.p2	NM_001159507|Grip2|243547|glutamate receptor interacting protein 2
mm9_v1_chr10_+_87841876_87842156	0.259634	NKX3-2.p2	BC060638|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AK140867|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AK173132|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_001004164|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm9_v1_chr4_+_42929523_42929598	0.259428	NKX3-2.p2	AK122428|N28178|230085|expressed sequence N28178
mm9_v1_chr1_+_50984361_50984403	0.258168	NKX3-2.p2	AB041565|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AK029307|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	NM_019790|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AK076254|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AK135038|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	BC034850|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AB017270|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2
mm9_v1_chr4_-_35792385_35792444	0.255615	NKX3-2.p2	BC137866|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC144985|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC145692|Lingo2|242384|leucine rich repeat and Ig domain containing 2	AK045639|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_001166001|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_175516|Lingo2|242384|leucine rich repeat and Ig domain containing 2
mm9_v1_chrX_+_131252542_131252558	0.254984	NKX3-2.p2	AK019405|Armcx1|78248|armadillo repeat containing, X-linked 1	BC021410|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr18_+_37915375_37915594	0.253954	NKX3-2.p2	BC064675|Pcdhga11|93723|protocadherin gamma subfamily A, 11	NM_033594|Pcdhga11|93723|protocadherin gamma subfamily A, 11	BC059837|Pcdhga11|93723|protocadherin gamma subfamily A, 11	AY013794|Pcdhga11|93723|protocadherin gamma subfamily A, 11
mm9_v1_chrX_+_131291100_131291196	0.253824	NKX3-2.p2	NM_027870|Armcx3|71703|armadillo repeat containing, X-linked 3	AK030729|Armcx3|71703|armadillo repeat containing, X-linked 3	AK004598|Armcx3|71703|armadillo repeat containing, X-linked 3	BC051113|Armcx3|71703|armadillo repeat containing, X-linked 3	BC108360|Armcx3|71703|armadillo repeat containing, X-linked 3
mm9_v1_chr2_-_118082593_118082701	0.253391	NKX3-2.p2	BC125024|Fsip1|71313|fibrous sheath-interacting protein 1	AK017026|Fsip1|71313|fibrous sheath-interacting protein 1	AK005924|Fsip1|71313|fibrous sheath-interacting protein 1	AF448787|Fsip1|71313|fibrous sheath-interacting protein 1	NM_027759|Fsip1|71313|fibrous sheath-interacting protein 1
mm9_v1_chr16_+_91225794_91225820	0.252969	NKX3-2.p2	BC051967|Olig2|50913|oligodendrocyte transcription factor 2	NM_016967|Olig2|50913|oligodendrocyte transcription factor 2	AB038697|Olig2|50913|oligodendrocyte transcription factor 2	AK080615|Olig2|50913|oligodendrocyte transcription factor 2
mm9_v1_chr15_-_93426312_93426402	0.252137	NKX3-2.p2	AK153711|Prickle1|106042|prickle homolog 1 (Drosophila)	NM_001033217|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr2_-_73613381_73613446	0.251753	NKX3-2.p2	NM_001113246|Chn1|108699|chimerin (chimaerin) 1	NM_001166603|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr16_+_13986691_13986753	0.251612	NKX3-2.p2	AK049997|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK076136|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK139470|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK136859|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	NM_144518|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK019307|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	BC022741|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK035868|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene
mm9_v1_chr9_-_21116703_21116742	0.250767	NKX3-2.p2	BC003704|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK160161|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit
mm9_v1_chr12_+_30622876_30622919	0.250308	NKX3-2.p2	AK142872|Pxdn|69675|peroxidasin homolog (Drosophila)	NM_181395|Pxdn|69675|peroxidasin homolog (Drosophila)	BC150789|Pxdn|69675|peroxidasin homolog (Drosophila)	AK054255|Pxdn|69675|peroxidasin homolog (Drosophila)	AK163597|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr4_-_49562319_49562386	0.249569	NKX3-2.p2	BC026577|Aldob|230163|aldolase B, fructose-bisphosphate	BC034172|Aldob|230163|aldolase B, fructose-bisphosphate	BC034173|Aldob|230163|aldolase B, fructose-bisphosphate	BC022113|Aldob|230163|aldolase B, fructose-bisphosphate	BC034171|Aldob|230163|aldolase B, fructose-bisphosphate	BC036130|Aldob|230163|aldolase B, fructose-bisphosphate	BC016435|Aldob|230163|aldolase B, fructose-bisphosphate	BC036131|Aldob|230163|aldolase B, fructose-bisphosphate	BC036132|Aldob|230163|aldolase B, fructose-bisphosphate	BC036133|Aldob|230163|aldolase B, fructose-bisphosphate	NM_144903|Aldob|230163|aldolase B, fructose-bisphosphate	BC030724|Aldob|230163|aldolase B, fructose-bisphosphate	BC024112|Aldob|230163|aldolase B, fructose-bisphosphate	BC024056|Aldob|230163|aldolase B, fructose-bisphosphate	BC030725|Aldob|230163|aldolase B, fructose-bisphosphate	BC034169|Aldob|230163|aldolase B, fructose-bisphosphate	AK149598|Aldob|230163|aldolase B, fructose-bisphosphate	AK167566|Aldob|230163|aldolase B, fructose-bisphosphate	AK168600|Aldob|230163|aldolase B, fructose-bisphosphate	AK149395|Aldob|230163|aldolase B, fructose-bisphosphate	AK167334|Aldob|230163|aldolase B, fructose-bisphosphate	AK135385|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr18_-_34784206_34784257	0.249129	NKX3-2.p2	BC021482|Brd8|78656|bromodomain containing 8	AK132365|Brd8|78656|bromodomain containing 8	AK014475|Brd8|78656|bromodomain containing 8	BC023837|Brd8|78656|bromodomain containing 8	AK019151|Brd8|78656|bromodomain containing 8	AK032320|Brd8|78656|bromodomain containing 8	AK161689|Brd8|78656|bromodomain containing 8	AK042446|Brd8|78656|bromodomain containing 8	AK172658|Brd8|78656|bromodomain containing 8
mm9_v1_chrX_-_20539095_20539142	0.248559	NKX3-2.p2	AK027917|Uxt|22294|ubiquitously expressed transcript	NM_013840|Uxt|22294|ubiquitously expressed transcript	AK086822|Uxt|22294|ubiquitously expressed transcript	AK163983|Uxt|22294|ubiquitously expressed transcript
mm9_v1_chr10_+_13220952_13220993	0.246595	NKX3-2.p2	AK035607|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK151204|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK044790|Fuca2|66848|fucosidase, alpha-L- 2, plasma
mm9_v1_chr5_+_137994744_137994862	0.246455	NKX3-2.p2	BC049539|Actl6b|83766|actin-like 6B	NM_031404|Actl6b|83766|actin-like 6B	AB075226|Actl6b|83766|actin-like 6B
mm9_v1_chr11_-_70468130_70468151	0.246318	NKX3-2.p2	AK011066|Pfn1|18643|profilin 1	AK152491|Pfn1|18643|profilin 1	AK160191|Pfn1|18643|profilin 1	NM_011072|Pfn1|18643|profilin 1
mm9_v1_chrX_+_156065141_156065596	0.243067	NKX3-2.p2	AK049182|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK172022|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK080930|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_001135727|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK038540|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK208632|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr8_+_114464651_114464671	0.242882	NKX3-2.p2	
mm9_v1_chr14_+_105657889_105657939	0.242728	NKX3-2.p2	NM_001190989|Ndfip2|76273|Nedd4 family interacting protein 2	NM_029561|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr8_+_81033220_81033473	0.242643	NKX3-2.p2	NM_029736|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK160402|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK079901|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152752|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152849|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK010834|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK165983|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK040517|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116666|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116717|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825926|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825927|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825928|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm9_v1_chr8_+_74763920_74764019	0.242184	NKX3-2.p2	AK148173|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1
mm9_v1_chr9_+_122481617_122481627	0.242162	NKX3-2.p2	AK048438|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK049978|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK079255|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK084074|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK135014|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene
mm9_v1_chrX_-_152057864_152057869	0.240939	NKX3-2.p2	BC116313|Ptchd1|211612|patched domain containing 1	BC116312|Ptchd1|211612|patched domain containing 1	NM_001093750|Ptchd1|211612|patched domain containing 1
mm9_v1_chr8_+_107572489_107572523	0.240733	NKX3-2.p2	NM_001164681|Ces3a|382053|carboxylesterase 3A	NM_198672|Ces3a|382053|carboxylesterase 3A	AK138932|Ces3a|382053|carboxylesterase 3A	BC061004|Ces3a|382053|carboxylesterase 3A	BC035526|Ces3a|382053|carboxylesterase 3A	BC057187|Ces3a|382053|carboxylesterase 3A	BC057188|Ces3a|382053|carboxylesterase 3A	BC048380|Ces3a|382053|carboxylesterase 3A	L11333|Ces3a|382053|carboxylesterase 3A	S64130|Ces3a|382053|carboxylesterase 3A
mm9_v1_chr11_-_68666619_68666656	0.240641	NKX3-2.p2	AF323918|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	NM_023668|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr12_+_82046447_82046492	0.240429	NKX3-2.p2	NM_001079694|Srsf5|20384|serine/arginine-rich splicing factor 5	NM_001079695|Srsf5|20384|serine/arginine-rich splicing factor 5	NM_009159|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chrX_+_132373572_132373652	0.240336	NKX3-2.p2	NM_001163015|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	NM_001163016|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	NM_001163017|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	AK030638|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	AK081764|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	BC117924|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	BC117923|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2
mm9_v1_chrX_-_18744357_18744370	0.239253	NKX3-2.p2	AK170409|Gm14636|100038616|predicted gene 14636
mm9_v1_chr1_-_45559866_45559893	0.23884	NKX3-2.p2	BC055077|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr17_-_45710161_45710212	0.237897	NKX3-2.p2	AK184233|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK191250|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK194406|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK195161|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK195294|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196279|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196368|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK197826|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK198614|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK216006|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK146809|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	M36829|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	BC002167|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	BC088985|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	M18186|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AF465639|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	NM_008302|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr3_+_40549475_40549540	0.237407	NKX3-2.p2	BC012712|Hspa4l|18415|heat shock protein 4 like	AK144225|Hspa4l|18415|heat shock protein 4 like	AK032066|Hspa4l|18415|heat shock protein 4 like	BC110662|Hspa4l|18415|heat shock protein 4 like	BC057002|Hspa4l|18415|heat shock protein 4 like	NM_011020|Hspa4l|18415|heat shock protein 4 like	D49482|Hspa4l|18415|heat shock protein 4 like
mm9_v1_chr6_-_49213980_49214011	0.236444	NKX3-2.p2	AK171788|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK172413|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	BC057448|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	BC058764|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076606|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr17_+_27070275_27070404	0.236353	NKX3-2.p2	AB011550|Phf1|21652|PHD finger protein 1	AK133474|Phf1|21652|PHD finger protein 1	U81490|Phf1|21652|PHD finger protein 1	BC145595|Phf1|21652|PHD finger protein 1	BC145596|Phf1|21652|PHD finger protein 1	BC015077|Phf1|21652|PHD finger protein 1
mm9_v1_chr15_+_80808238_80808277	0.235365	NKX3-2.p2	AY382616|Sgsm3|105835|small G protein signaling modulator 3	AK166391|Sgsm3|105835|small G protein signaling modulator 3	AK164757|Sgsm3|105835|small G protein signaling modulator 3	BC025561|Sgsm3|105835|small G protein signaling modulator 3
mm9_v1_chr6_+_66846377_66846490	0.235329	NKX3-2.p2	NM_001177556|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177557|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177559|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177560|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_025278|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK005561|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	BC040685|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK162342|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK166035|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK159872|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK148765|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK033422|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12
mm9_v1_chr16_+_17619441_17619473	0.234597	NKX3-2.p2	AK019466|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164609|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164610|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164611|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_029945|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031685|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031029|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036380|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK035892|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036055|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164234|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK129354|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK138720|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164456|Smpd4|77626|sphingomyelin phosphodiesterase 4	BC026767|Smpd4|77626|sphingomyelin phosphodiesterase 4
mm9_v1_chr8_+_114464581_114464637	0.232925	NKX3-2.p2	AK013563|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AK134873|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AF190644|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	BC081436|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	NM_026693|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AK002596|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AK049819|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm9_v1_chr7_-_106632113_106632218	0.232776	NKX3-2.p2	AK206775|Rps3|27050|ribosomal protein S3	X76772|Rps3|27050|ribosomal protein S3	BC010721|Rps3|27050|ribosomal protein S3	AK165174|Rps3|27050|ribosomal protein S3	AK167266|Rps3|27050|ribosomal protein S3	AK168845|Rps3|27050|ribosomal protein S3	AK150479|Rps3|27050|ribosomal protein S3	AK003181|Rps3|27050|ribosomal protein S3	AK011655|Rps3|27050|ribosomal protein S3	AK146796|Rps3|27050|ribosomal protein S3	AK012234|Rps3|27050|ribosomal protein S3	AK012314|Rps3|27050|ribosomal protein S3	AK012538|Rps3|27050|ribosomal protein S3	AK088038|Rps3|27050|ribosomal protein S3	AK143603|Rps3|27050|ribosomal protein S3	AK148030|Rps3|27050|ribosomal protein S3	AK160526|Rps3|27050|ribosomal protein S3	AK167210|Rps3|27050|ribosomal protein S3	AK010579|Rps3|27050|ribosomal protein S3	AK010678|Rps3|27050|ribosomal protein S3	AK051243|Rps3|27050|ribosomal protein S3	AK146165|Rps3|27050|ribosomal protein S3	AK159508|Rps3|27050|ribosomal protein S3	AK164077|Rps3|27050|ribosomal protein S3	AK166750|Rps3|27050|ribosomal protein S3	NM_012052|Rps3|27050|ribosomal protein S3
mm9_v1_chr9_-_107673288_107673315	0.232637	NKX3-2.p2	AK133999|Rbm5|83486|RNA binding motif protein 5	BC042419|Rbm5|83486|RNA binding motif protein 5	BC023854|Rbm5|83486|RNA binding motif protein 5	BC054729|Rbm5|83486|RNA binding motif protein 5	BC060985|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chrX_+_33428784_33428826	0.232168	NKX3-2.p2	AB116935|Dock11|75974|dedicator of cytokinesis 11	NM_001009947|Dock11|75974|dedicator of cytokinesis 11
mm9_v1_chr2_-_131855937_131856045	0.231647	NKX3-2.p2	AK172906|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr15_-_8660479_8660490	0.231343	NKX3-2.p2	AK045949|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK080879|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr14_+_45949451_45949542	0.230823	NKX3-2.p2	AK012174|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC116752|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC119168|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	NM_025959|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK144728|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK014354|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC037099|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK166961|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC043044|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC057997|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6
mm9_v1_chr19_-_18706181_18706214	0.229888	NKX3-2.p2	BC060986|Ostf1|20409|osteoclast stimulating factor 1
mm9_v1_chr4_+_154999017_154999041	0.229323	NKX3-2.p2	BC052920|Cdk11b|12537|cyclin-dependent kinase 11B
mm9_v1_chr13_-_90229117_90229212	0.229172	NKX3-2.p2	AB055154|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	AK009951|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	AK053612|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	AK088281|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	BC025538|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	NM_028012|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4
mm9_v1_chr2_+_34627607_34627658	0.229046	NKX3-2.p2	NM_001163434|Hspa5|14828|heat shock protein 5	NM_022310|Hspa5|14828|heat shock protein 5	AK077463|Hspa5|14828|heat shock protein 5	AK146647|Hspa5|14828|heat shock protein 5	AK148539|Hspa5|14828|heat shock protein 5	AK149447|Hspa5|14828|heat shock protein 5	AK151647|Hspa5|14828|heat shock protein 5	AK151806|Hspa5|14828|heat shock protein 5	AK152958|Hspa5|14828|heat shock protein 5	AK160821|Hspa5|14828|heat shock protein 5	AK168012|Hspa5|14828|heat shock protein 5	AK169034|Hspa5|14828|heat shock protein 5	AK004578|Hspa5|14828|heat shock protein 5	AK076079|Hspa5|14828|heat shock protein 5	AK144650|Hspa5|14828|heat shock protein 5	AK144742|Hspa5|14828|heat shock protein 5	AK152020|Hspa5|14828|heat shock protein 5	AK159719|Hspa5|14828|heat shock protein 5	AK166207|Hspa5|14828|heat shock protein 5	AK166739|Hspa5|14828|heat shock protein 5	AK167011|Hspa5|14828|heat shock protein 5	AK152521|Hspa5|14828|heat shock protein 5	AK168230|Hspa5|14828|heat shock protein 5	BC050927|Hspa5|14828|heat shock protein 5
mm9_v1_chr2_+_152987036_152987075	0.228855	NKX3-2.p2	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr1_+_57831651_57831771	0.228779	NKX3-2.p2	NM_144882|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK012791|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK019292|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK161988|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK031266|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	BC021879|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK032169|Spats2l|67198|spermatogenesis associated, serine-rich 2-like
mm9_v1_chr10_+_21601968_21601989	0.228756	NKX3-2.p2	BC070401|Sgk1|20393|serum/glucocorticoid regulated kinase 1	NM_001161845|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr2_+_31007833_31007940	0.227431	NKX3-2.p2	NM_178760|Gpr107|277463|G protein-coupled receptor 107	AK082237|Gpr107|277463|G protein-coupled receptor 107	AK030433|Gpr107|277463|G protein-coupled receptor 107	AK154530|Gpr107|277463|G protein-coupled receptor 107	AK083025|Gpr107|277463|G protein-coupled receptor 107	AK088544|Gpr107|277463|G protein-coupled receptor 107	AK034815|Gpr107|277463|G protein-coupled receptor 107	BC117900|Gpr107|277463|G protein-coupled receptor 107	BC117901|Gpr107|277463|G protein-coupled receptor 107	BC092231|Gpr107|277463|G protein-coupled receptor 107	AK036987|Gpr107|277463|G protein-coupled receptor 107	AK142454|Gpr107|277463|G protein-coupled receptor 107	AK129407|Gpr107|277463|G protein-coupled receptor 107
mm9_v1_chr8_-_13494457_13494536	0.227092	NKX3-2.p2	BC005444|Gas6|14456|growth arrest specific 6	X59846|Gas6|14456|growth arrest specific 6	AK086187|Gas6|14456|growth arrest specific 6	NM_019521|Gas6|14456|growth arrest specific 6
mm9_v1_chr7_-_146374392_146374419	0.226285	NKX3-2.p2	NM_021302|Stk32c|57740|serine/threonine kinase 32C
mm9_v1_chr2_+_163245523_163245600	0.226223	NKX3-2.p2	AK013849|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene	AK020931|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene
mm9_v1_chr2_+_55289530_55289587	0.225995	NKX3-2.p2	AK046778|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	D45022|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	NM_008426|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103671|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103673|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103674|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3	BC103672|Kcnj3|16519|potassium inwardly-rectifying channel, subfamily J, member 3
mm9_v1_chr2_-_153270059_153270214	0.225648	NKX3-2.p2	BC079552|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK157863|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK139459|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	NM_001001986|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene
mm9_v1_chr15_-_103070263_103070286	0.225326	NKX3-2.p2	AK008792|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chrM_+_2750_2751	0.22365	NKX3-2.p2	
mm9_v1_chr6_+_54631644_54631765	0.223322	NKX3-2.p2	BC042507|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	BC052467|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK019120|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK019128|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK043452|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	NM_026629|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene
mm9_v1_chr5_-_144031617_144031663	0.223251	NKX3-2.p2	BC057078|Zfp316|54201|zinc finger protein 316
mm9_v1_chr18_+_62708564_62708648	0.223232	NKX3-2.p2	AK039062|Spink10|328971|serine peptidase inhibitor, Kazal type 10	DQ437330|Spink10|328971|serine peptidase inhibitor, Kazal type 10	NM_177829|Spink10|328971|serine peptidase inhibitor, Kazal type 10	AK162840|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125360|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125362|Spink10|328971|serine peptidase inhibitor, Kazal type 10
mm9_v1_chr4_-_133684599_133684716	0.222021	NKX3-2.p2	AK003431|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3	BC008110|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3	NM_080559|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3
mm9_v1_chr6_+_113328105_113328186	0.221907	NKX3-2.p2	NM_001170485|Arpc4|68089|actin related protein 2/3 complex, subunit 4	NM_001170486|Arpc4|68089|actin related protein 2/3 complex, subunit 4	NM_026552|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK017993|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK030840|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK039215|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK076248|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK133626|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK159410|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK136082|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK018069|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK150690|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK153380|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AJ278129|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK077325|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK166440|Arpc4|68089|actin related protein 2/3 complex, subunit 4
mm9_v1_chr12_+_91050912_91050922	0.221054	NKX3-2.p2	AK042730|Nrxn3|18191|neurexin III
mm9_v1_chr7_-_35015239_35015294	0.220518	NKX3-2.p2	AK164566|Gpi1|14751|glucose phosphate isomerase 1	AK171956|Gpi1|14751|glucose phosphate isomerase 1	AK159838|Gpi1|14751|glucose phosphate isomerase 1	AK031081|Gpi1|14751|glucose phosphate isomerase 1	BC088995|Gpi1|14751|glucose phosphate isomerase 1	BC157972|Gpi1|14751|glucose phosphate isomerase 1	BC172124|Gpi1|14751|glucose phosphate isomerase 1	AK133827|Gpi1|14751|glucose phosphate isomerase 1	M14220|Gpi1|14751|glucose phosphate isomerase 1	AK137805|Gpi1|14751|glucose phosphate isomerase 1	AK150341|Gpi1|14751|glucose phosphate isomerase 1	AK169681|Gpi1|14751|glucose phosphate isomerase 1	AK134890|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr9_+_45178267_45178361	0.220509	NKX3-2.p2	NM_022004|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr9_+_46036799_46036808	0.220469	NKX3-2.p2	L04151|Apoa1|11806|apolipoprotein A-I	BC091745|Apoa1|11806|apolipoprotein A-I	BC019837|Apoa1|11806|apolipoprotein A-I	BC012253|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr1_-_77511577_77511645	0.220373	NKX3-2.p2	BC004782|Epha4|13838|Eph receptor A4	BC052164|Epha4|13838|Eph receptor A4
mm9_v1_chr17_+_24551509_24551671	0.220336	NKX3-2.p2	AK143213|Rnps1|19826|ribonucleic acid binding protein S1	AK011475|Rnps1|19826|ribonucleic acid binding protein S1	NM_001080127|Rnps1|19826|ribonucleic acid binding protein S1	NM_001080128|Rnps1|19826|ribonucleic acid binding protein S1	NM_009070|Rnps1|19826|ribonucleic acid binding protein S1	AK146443|Rnps1|19826|ribonucleic acid binding protein S1	AK151150|Rnps1|19826|ribonucleic acid binding protein S1	BC002061|Rnps1|19826|ribonucleic acid binding protein S1	AK165905|Rnps1|19826|ribonucleic acid binding protein S1	AK164151|Rnps1|19826|ribonucleic acid binding protein S1
mm9_v1_chr7_+_30954893_30954940	0.219866	NKX3-2.p2	AK046598|Gm5113|330503|predicted gene 5113	AK147880|Gm5113|330503|predicted gene 5113	NM_001033540|Gm5113|330503|predicted gene 5113
mm9_v1_chr5_-_143668398_143668402	0.219863	NKX3-2.p2	AK075973|Actb|11461|actin, beta	AK088691|Actb|11461|actin, beta	AK147787|Actb|11461|actin, beta	AK150662|Actb|11461|actin, beta	AK150675|Actb|11461|actin, beta	AK151010|Actb|11461|actin, beta	AK151145|Actb|11461|actin, beta	AK151166|Actb|11461|actin, beta	AK151226|Actb|11461|actin, beta	AK151277|Actb|11461|actin, beta	AK151350|Actb|11461|actin, beta	AK151386|Actb|11461|actin, beta	AK151468|Actb|11461|actin, beta	AK151898|Actb|11461|actin, beta	AK151956|Actb|11461|actin, beta	AK152052|Actb|11461|actin, beta	AK152433|Actb|11461|actin, beta	AK152470|Actb|11461|actin, beta	AK152844|Actb|11461|actin, beta	AK153461|Actb|11461|actin, beta	AK159834|Actb|11461|actin, beta	AK160029|Actb|11461|actin, beta	X03672|Actb|11461|actin, beta	AK152043|Actb|11461|actin, beta	AK150854|Actb|11461|actin, beta	AK150866|Actb|11461|actin, beta	AK151712|Actb|11461|actin, beta	AK152591|Actb|11461|actin, beta	AK159759|Actb|11461|actin, beta	NM_007393|Actb|11461|actin, beta
mm9_v1_chr11_+_117193738_117193767	0.218996	NKX3-2.p2	AK164581|Sept9|53860|septin 9	AK031757|Sept9|53860|septin 9
mm9_v1_chr5_+_93696645_93696792	0.218637	NKX3-2.p2	BC060180|Ccng2|12452|cyclin G2	BC088980|Ccng2|12452|cyclin G2
mm9_v1_chr13_-_36826104_36826206	0.218162	NKX3-2.p2	AK003046|Nrn1|68404|neuritin 1
mm9_v1_chr4_+_63005581_63005631	0.217886	NKX3-2.p2	AK138985|Orm1|18405|orosomucoid 1	M27008|Orm1|18405|orosomucoid 1	NM_008768|Orm1|18405|orosomucoid 1	BC012725|Orm1|18405|orosomucoid 1	CT010399|Orm1|18405|orosomucoid 1
mm9_v1_chr6_+_45010040_45010086	0.217852	NKX3-2.p2	NM_001004357|Cntnap2|66797|contactin associated protein-like 2	AK129232|Cntnap2|66797|contactin associated protein-like 2
mm9_v1_chr15_+_81066029_81066052	0.217795	NKX3-2.p2	AK134867|Mchr1|207911|melanin-concentrating hormone receptor 1
mm9_v1_chr5_+_31754808_31754902	0.216997	NKX3-2.p2	NM_172993|Zfp512|269639|zinc finger protein 512	AK173267|Zfp512|269639|zinc finger protein 512	AK146353|Zfp512|269639|zinc finger protein 512	AK084205|Zfp512|269639|zinc finger protein 512	AK149921|Zfp512|269639|zinc finger protein 512	AK154918|Zfp512|269639|zinc finger protein 512	BC089160|Zfp512|269639|zinc finger protein 512	BC066136|Zfp512|269639|zinc finger protein 512
mm9_v1_chr15_+_21041206_21041206	0.216901	NKX3-2.p2	BC086655|Cdh12|215654|cadherin 12	NM_001008420|Cdh12|215654|cadherin 12
mm9_v1_chr15_+_41662472_41662583	0.216578	NKX3-2.p2	NM_001130164|Oxr1|170719|oxidation resistance 1	AK014186|3110047M12Rik|73184|RIKEN cDNA 3110047M12 gene
mm9_v1_chr1_+_171585621_171585677	0.216079	NKX3-2.p2	AK004165|Rgs5|19737|regulator of G-protein signaling 5	AK028765|Rgs5|19737|regulator of G-protein signaling 5	AK030300|Rgs5|19737|regulator of G-protein signaling 5	AK044096|Rgs5|19737|regulator of G-protein signaling 5	AK054098|Rgs5|19737|regulator of G-protein signaling 5	NM_009063|Rgs5|19737|regulator of G-protein signaling 5	BC037683|Rgs5|19737|regulator of G-protein signaling 5	U67188|Rgs5|19737|regulator of G-protein signaling 5
mm9_v1_chr6_+_124999976_124999984	0.216024	NKX3-2.p2	AK132705|Acrbp|54137|proacrosin binding protein	AK076691|Acrbp|54137|proacrosin binding protein	BC061122|Ing4|28019|inhibitor of growth family, member 4
mm9_v1_chr11_-_120442448_120442571	0.21601	NKX3-2.p2	AK077343|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr4_+_95634005_95634072	0.214072	NKX3-2.p2	AK020924|Hook1|77963|hook homolog 1 (Drosophila)	AK028714|Hook1|77963|hook homolog 1 (Drosophila)	AK038941|Hook1|77963|hook homolog 1 (Drosophila)	AK043870|Hook1|77963|hook homolog 1 (Drosophila)	AK049897|Hook1|77963|hook homolog 1 (Drosophila)	BC061688|Hook1|77963|hook homolog 1 (Drosophila)	NM_030014|Hook1|77963|hook homolog 1 (Drosophila)
mm9_v1_chr6_+_97160736_97160744	0.21155	NKX3-2.p2	D87211|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chr4_+_134024234_134024333	0.211266	NKX3-2.p2	NM_019641|Stmn1|16765|stathmin 1	AB064953|Stmn1|16765|stathmin 1	AK002606|Stmn1|16765|stathmin 1	AK012231|Stmn1|16765|stathmin 1	AK012347|Stmn1|16765|stathmin 1	AK014108|Stmn1|16765|stathmin 1	AK088628|Stmn1|16765|stathmin 1	AK013302|Stmn1|16765|stathmin 1	BC010581|Stmn1|16765|stathmin 1	BC031831|Stmn1|16765|stathmin 1	BC054396|Stmn1|16765|stathmin 1
mm9_v1_chr18_+_37678006_37678134	0.209962	NKX3-2.p2	AK043492|Pcdhb22|93893|protocadherin beta 22	NM_053147|Pcdhb22|93893|protocadherin beta 22	BC094239|Pcdhb22|93893|protocadherin beta 22	AF326315|Pcdhb22|93893|protocadherin beta 22	AY013784|Pcdhb22|93893|protocadherin beta 22
mm9_v1_chr12_-_41172348_41172381	0.209707	NKX3-2.p2	AK156529|Zfp277|246196|zinc finger protein 277	BC043453|Zfp277|246196|zinc finger protein 277	AK077401|Zfp277|246196|zinc finger protein 277	AK075945|Zfp277|246196|zinc finger protein 277	AK145060|Zfp277|246196|zinc finger protein 277	NM_172575|Zfp277|246196|zinc finger protein 277	NM_178845|Zfp277|246196|zinc finger protein 277
mm9_v1_chr14_-_64162810_64162839	0.20924	NKX3-2.p2	AK044957|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr9_-_21043375_21043438	0.208644	NKX3-2.p2	AK046178|Keap1|50868|kelch-like ECH-associated protein 1	AB020063|Keap1|50868|kelch-like ECH-associated protein 1	AK039549|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chr14_-_64162744_64162804	0.208226	NKX3-2.p2	BC046275|Mtmr9|210376|myotubularin related protein 9	NM_177594|Mtmr9|210376|myotubularin related protein 9	AK035026|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr11_+_4537719_4537795	0.207717	NKX3-2.p2	AK051387|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	AK048876|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	AK148105|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	BC013537|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	NM_029291|Ascc2|75452|activating signal cointegrator 1 complex subunit 2
mm9_v1_chr7_+_148633501_148633587	0.207052	NKX3-2.p2	AK008344|Rplp2|67186|ribosomal protein, large P2	AK010618|Rplp2|67186|ribosomal protein, large P2	AK012526|Rplp2|67186|ribosomal protein, large P2	NM_026020|Rplp2|67186|ribosomal protein, large P2	AK088737|Rplp2|67186|ribosomal protein, large P2	AK134206|Rplp2|67186|ribosomal protein, large P2	AK028140|Rplp2|67186|ribosomal protein, large P2	AK028149|Rplp2|67186|ribosomal protein, large P2	AK012402|Rplp2|67186|ribosomal protein, large P2	BC012413|Rplp2|67186|ribosomal protein, large P2	AK002419|Rplp2|67186|ribosomal protein, large P2	AK166774|Rplp2|67186|ribosomal protein, large P2
mm9_v1_chr1_+_131169878_131169880	0.20664	NKX3-2.p2	AK052119|Thsd7b|210417|thrombospondin, type I, domain containing 7B	NM_172485|Thsd7b|210417|thrombospondin, type I, domain containing 7B
mm9_v1_chr3_-_151856766_151856837	0.206258	NKX3-2.p2	BC017161|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_025926|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chrX_+_8777098_8777242	0.205519	NKX3-2.p2	AK031623|Lancl3|236285|LanC lantibiotic synthetase component C-like 3 (bacterial)	NM_173414|Lancl3|236285|LanC lantibiotic synthetase component C-like 3 (bacterial)	BC115944|Lancl3|236285|LanC lantibiotic synthetase component C-like 3 (bacterial)
mm9_v1_chr15_+_3220999_3221005	0.205478	NKX3-2.p2	AK168463|Sepp1|20363|selenoprotein P, plasma, 1	BC001991|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr10_+_127774778_127774839	0.205271	NKX3-2.p2	AK149990|Cs|12974|citrate synthase	AK010298|Cs|12974|citrate synthase
mm9_v1_chr16_-_32079420_32079468	0.20418	NKX3-2.p2	AK037275|Pak2|224105|p21 protein (Cdc42/Rac)-activated kinase 2
mm9_v1_chr13_-_108680257_108680267	0.203935	NKX3-2.p2	NM_145456|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr16_-_94747998_94748038	0.20381	NKX3-2.p2	BC003740|Dscr3|13185|Down syndrome critical region gene 3	AK188213|Dscr3|13185|Down syndrome critical region gene 3
mm9_v1_chr6_+_116214215_116214252	0.203701	NKX3-2.p2	AK089032|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)	NM_001081317|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)
mm9_v1_chr9_-_104165221_104165274	0.203574	NKX3-2.p2	AK165345|Dnajc13|235567|DnaJ (Hsp40) homolog, subfamily C, member 13	NM_001163026|Dnajc13|235567|DnaJ (Hsp40) homolog, subfamily C, member 13	AK083408|Dnajc13|235567|DnaJ (Hsp40) homolog, subfamily C, member 13	AK147911|Dnajc13|235567|DnaJ (Hsp40) homolog, subfamily C, member 13
mm9_v1_chr18_-_78402529_78402633	0.203444	NKX3-2.p2	AY221737|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2
mm9_v1_chr13_+_46597271_46597443	0.202823	NKX3-2.p2	AK035556|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	NM_026056|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr13_-_94407455_94407526	0.20254	NKX3-2.p2	AF033381|Bhmt|12116|betaine-homocysteine methyltransferase	BC093510|Bhmt|12116|betaine-homocysteine methyltransferase	BC037004|Bhmt|12116|betaine-homocysteine methyltransferase	AK077108|Bhmt|12116|betaine-homocysteine methyltransferase	AK149457|Bhmt|12116|betaine-homocysteine methyltransferase	AK166818|Bhmt|12116|betaine-homocysteine methyltransferase	AK149431|Bhmt|12116|betaine-homocysteine methyltransferase	AK166754|Bhmt|12116|betaine-homocysteine methyltransferase
mm9_v1_chr7_+_53039094_53039107	0.202474	NKX3-2.p2	BC059845|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr7_-_96666081_96666131	0.202447	NKX3-2.p2	NM_029614|Prss23|76453|protease, serine, 23
mm9_v1_chr13_-_41315751_41315817	0.201855	NKX3-2.p2	AK029855|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	BC098215|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	AF170908|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	NM_019423|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	AK044770|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	AK050397|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm9_v1_chr17_+_13109289_13109379	0.201343	NKX3-2.p2	AK151445|Tcp1|21454|t-complex protein 1	AK153430|Tcp1|21454|t-complex protein 1	AK166966|Tcp1|21454|t-complex protein 1	AK150666|Tcp1|21454|t-complex protein 1	AK150744|Tcp1|21454|t-complex protein 1	AK151903|Tcp1|21454|t-complex protein 1	AK152633|Tcp1|21454|t-complex protein 1	AK149611|Tcp1|21454|t-complex protein 1	AK151068|Tcp1|21454|t-complex protein 1	AK165665|Tcp1|21454|t-complex protein 1	NM_013686|Tcp1|21454|t-complex protein 1	AK149755|Tcp1|21454|t-complex protein 1	AK152759|Tcp1|21454|t-complex protein 1	AK153037|Tcp1|21454|t-complex protein 1	AK166828|Tcp1|21454|t-complex protein 1	AK167529|Tcp1|21454|t-complex protein 1	AK152641|Tcp1|21454|t-complex protein 1	BC003809|Tcp1|21454|t-complex protein 1	M12899|Tcp1|21454|t-complex protein 1	D90344|Tcp1|21454|t-complex protein 1
mm9_v1_chr9_+_47338431_47338446	0.201219	NKX3-2.p2	AB052293|Cadm1|54725|cell adhesion molecule 1	AB377192|Cadm1|54725|cell adhesion molecule 1	AK053839|Cadm1|54725|cell adhesion molecule 1	NM_001025600|Cadm1|54725|cell adhesion molecule 1	NM_018770|Cadm1|54725|cell adhesion molecule 1	NM_207675|Cadm1|54725|cell adhesion molecule 1	NM_207676|Cadm1|54725|cell adhesion molecule 1	AF539424|Cadm1|54725|cell adhesion molecule 1	BC095986|Cadm1|54725|cell adhesion molecule 1	BC069937|Cadm1|54725|cell adhesion molecule 1	BC057125|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr9_-_108984865_108984900	0.201134	NKX3-2.p2	BC106104|Ccdc72|66167|coiled-coil domain containing 72	BC054363|Ccdc72|66167|coiled-coil domain containing 72	BC090400|Ccdc72|66167|coiled-coil domain containing 72	BC034602|Ccdc72|66167|coiled-coil domain containing 72	AK169860|Ccdc72|66167|coiled-coil domain containing 72	BC116987|Ccdc72|66167|coiled-coil domain containing 72	BC116989|Ccdc72|66167|coiled-coil domain containing 72	AK160705|Ccdc72|66167|coiled-coil domain containing 72	AK002863|Ccdc72|66167|coiled-coil domain containing 72	AK003762|Ccdc72|66167|coiled-coil domain containing 72	NM_183250|Ccdc72|66167|coiled-coil domain containing 72
mm9_v1_chr15_-_74502981_74503002	0.200873	NKX3-2.p2	AF162777|Arc|11838|activity regulated cytoskeletal-associated protein	BC023127|Arc|11838|activity regulated cytoskeletal-associated protein	AK170446|Arc|11838|activity regulated cytoskeletal-associated protein	AK157822|Arc|11838|activity regulated cytoskeletal-associated protein	NM_018790|Arc|11838|activity regulated cytoskeletal-associated protein
mm9_v1_chr9_-_44773594_44773682	0.200822	NKX3-2.p2	BC025043|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028721|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC006649|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC021406|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028850|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK172893|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	NM_145400|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)
mm9_v1_chr19_-_5661634_5661648	0.200693	NKX3-2.p2	D11374|Sipa1|20469|signal-induced proliferation associated gene 1
mm9_v1_chr1_-_78485413_78485452	0.200388	NKX3-2.p2	AK168923|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK045432|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	NM_011811|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	BC002313|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK076607|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK134799|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK010271|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK012154|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK165645|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK167945|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	AK169621|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit	BC016428|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit
mm9_v1_chr13_-_93564652_93564772	0.200368	NKX3-2.p2	BC139414|Thbs4|21828|thrombospondin 4	AF102887|Thbs4|21828|thrombospondin 4	NM_011582|Thbs4|21828|thrombospondin 4
mm9_v1_chr11_+_115048783_115048880	0.200226	NKX3-2.p2	NM_001033393|Tmem104|320534|transmembrane protein 104	AK171314|Tmem104|320534|transmembrane protein 104	AK155041|Tmem104|320534|transmembrane protein 104	AK040894|Tmem104|320534|transmembrane protein 104	AK171457|Tmem104|320534|transmembrane protein 104	AK167098|Tmem104|320534|transmembrane protein 104	AK049868|Tmem104|320534|transmembrane protein 104	BC140976|Tmem104|320534|transmembrane protein 104
mm9_v1_chr1_-_108656198_108656318	0.200151	NKX3-2.p2	AK170064|Kdsr|70750|3-ketodihydrosphingosine reductase	AY634684|Kdsr|70750|3-ketodihydrosphingosine reductase	AK018155|Kdsr|70750|3-ketodihydrosphingosine reductase	BC023820|Kdsr|70750|3-ketodihydrosphingosine reductase	NM_027534|Kdsr|70750|3-ketodihydrosphingosine reductase
mm9_v1_chr15_-_64753721_64753861	0.200133	NKX3-2.p2	U85021|Adcy8|11514|adenylate cyclase 8	BC094231|Adcy8|11514|adenylate cyclase 8	AK163443|Adcy8|11514|adenylate cyclase 8	AK138244|Adcy8|11514|adenylate cyclase 8	NM_009623|Adcy8|11514|adenylate cyclase 8
mm9_v1_chr16_+_30065419_30065442	0.19998	NKX3-2.p2	AK133538|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	AK132536|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC018375|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC051428|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	NM_008235|Hes1|15205|hairy and enhancer of split 1 (Drosophila)
mm9_v1_chr11_+_60268143_60268162	0.199416	NKX3-2.p2	AK012988|Drg2|13495|developmentally regulated GTP binding protein 2	BC082564|Drg2|13495|developmentally regulated GTP binding protein 2
mm9_v1_chr15_-_95358306_95358472	0.199008	NKX3-2.p2	BC051968|Nell2|54003|NEL-like 2 (chicken)
mm9_v1_chr7_-_11080687_11080731	0.198586	NKX3-2.p2	BC050942|Zik1|22775|zinc finger protein interacting with K protein 1	BC067196|Zik1|22775|zinc finger protein interacting with K protein 1	AK159077|Zik1|22775|zinc finger protein interacting with K protein 1	AK146692|Zik1|22775|zinc finger protein interacting with K protein 1	U69133|Zik1|22775|zinc finger protein interacting with K protein 1	NM_009577|Zik1|22775|zinc finger protein interacting with K protein 1
mm9_v1_chr3_-_88262805_88262805	0.198073	NKX3-2.p2	NM_001163491|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr2_+_48805027_48805131	0.197729	NKX3-2.p2	NM_029924|Mbd5|109241|methyl-CpG binding domain protein 5	AK155574|Mbd5|109241|methyl-CpG binding domain protein 5
mm9_v1_chr11_+_5855721_5855888	0.197363	NKX3-2.p2	NM_019661|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK002916|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK007486|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK147098|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK150472|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK159253|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	BC006760|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AF076956|Ykt6|56418|YKT6 homolog (S. Cerevisiae)
mm9_v1_chr4_-_86876328_86876443	0.197284	NKX3-2.p2	AK038800|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK136058|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_172426|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr5_+_136559932_136559958	0.196836	NKX3-2.p2	BC057460|Rasa4|54153|RAS p21 protein activator 4	AK044762|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr1_-_137406954_137407027	0.196721	NKX3-2.p2	AK082667|Nav1|215690|neuron navigator 1	AK053255|Nav1|215690|neuron navigator 1
mm9_v1_chr3_-_158224306_158224367	0.196701	NKX3-2.p2	AK052066|Lrrc7|242274|leucine rich repeat containing 7	AK122498|Lrrc7|242274|leucine rich repeat containing 7
mm9_v1_chr18_-_6490828_6490843	0.196497	NKX3-2.p2	BC055805|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	BC060145|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	AK017858|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)
mm9_v1_chr15_+_54402988_54403054	0.195942	NKX3-2.p2	AK035986|Mal2|105853|mal, T-cell differentiation protein 2	BC113154|Mal2|105853|mal, T-cell differentiation protein 2
mm9_v1_chr15_+_101933364_101933418	0.195648	NKX3-2.p2	AK147789|Tenc1|209039|tensin like C1 domain-containing phosphatase	AK147941|Tenc1|209039|tensin like C1 domain-containing phosphatase	BC042190|Tenc1|209039|tensin like C1 domain-containing phosphatase	NM_153533|Tenc1|209039|tensin like C1 domain-containing phosphatase
mm9_v1_chr2_-_74416925_74417031	0.19542	NKX3-2.p2	AY312281|Lnp|69605|limb and neural patterns	BC057961|Lnp|69605|limb and neural patterns	AK173241|Lnp|69605|limb and neural patterns	AK053593|Lnp|69605|limb and neural patterns	AK143497|Lnp|69605|limb and neural patterns	AK009311|Lnp|69605|limb and neural patterns	AK136506|Lnp|69605|limb and neural patterns	AK082900|Lnp|69605|limb and neural patterns	AK137445|Lnp|69605|limb and neural patterns	NM_001110209|Lnp|69605|limb and neural patterns	NM_027133|Lnp|69605|limb and neural patterns
mm9_v1_chr15_+_102156546_102156618	0.195396	NKX3-2.p2	NM_027044|Pfdn5|56612|prefoldin 5	AF108357|Pfdn5|56612|prefoldin 5	AK004438|Pfdn5|56612|prefoldin 5	AK145883|Pfdn5|56612|prefoldin 5	AK005682|Pfdn5|56612|prefoldin 5	BC026920|Pfdn5|56612|prefoldin 5	AK028206|Pfdn5|56612|prefoldin 5
mm9_v1_chr6_-_136123091_136123161	0.195169	NKX3-2.p2	AK013569|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm9_v1_chr2_+_84667196_84667249	0.19486	NKX3-2.p2	AF150090|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	BC031448|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	AK013546|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)
mm9_v1_chr7_+_123477761_123477775	0.194253	NKX3-2.p2	AK138846|Gm10589|100037281|predicted gene 10589	AK140810|Gm10589|100037281|predicted gene 10589
mm9_v1_chrX_-_147022623_147022691	0.193636	NKX3-2.p2	BC026769|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK040145|Apex2|77622|apurinic/apyrimidinic endonuclease 2	BC053107|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK088918|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK081677|Apex2|77622|apurinic/apyrimidinic endonuclease 2	BC078633|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK050858|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK021248|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AK033489|Apex2|77622|apurinic/apyrimidinic endonuclease 2	AB072498|Apex2|77622|apurinic/apyrimidinic endonuclease 2	NM_029943|Apex2|77622|apurinic/apyrimidinic endonuclease 2
mm9_v1_chr2_+_135883963_135884022	0.193626	NKX3-2.p2	AK018222|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene	AK045946|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr8_+_74764023_74764030	0.193378	NKX3-2.p2	M62419|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1	NM_007456|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1
mm9_v1_chr11_+_115024626_115024782	0.193039	NKX3-2.p2	AK085210|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	AK168894|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	NM_012030|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	AK153558|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	BC085141|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	U74079|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	BC038656|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1
mm9_v1_chr16_-_57231484_57231596	0.192713	NKX3-2.p2	AK171591|Tbc1d23|67581|TBC1 domain family, member 23	BC031706|Tbc1d23|67581|TBC1 domain family, member 23	NM_026254|Tbc1d23|67581|TBC1 domain family, member 23	AK155142|Tbc1d23|67581|TBC1 domain family, member 23
mm9_v1_chr1_-_134638361_134638397	0.191998	NKX3-2.p2	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr5_+_77403725_77403746	0.191531	NKX3-2.p2	AK133784|Srp72|66661|signal recognition particle 72	NM_025691|Srp72|66661|signal recognition particle 72	BC003434|Srp72|66661|signal recognition particle 72	AK138875|Srp72|66661|signal recognition particle 72	BC019196|Srp72|66661|signal recognition particle 72
mm9_v1_chr15_-_67008222_67008399	0.191334	NKX3-2.p2	AK078469|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK143207|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	BC023130|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK169958|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK086286|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	BC099670|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK031344|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	BC099693|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK138747|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm9_v1_chr9_-_121186287_121186314	0.191262	NKX3-2.p2	AK016524|Ulk4|209012|unc-51-like kinase 4 (C. elegans)	AK132731|Ulk4|209012|unc-51-like kinase 4 (C. elegans)	NM_177589|Ulk4|209012|unc-51-like kinase 4 (C. elegans)	BC065094|Ulk4|209012|unc-51-like kinase 4 (C. elegans)	AK043628|Ulk4|209012|unc-51-like kinase 4 (C. elegans)
mm9_v1_chr5_+_87233514_87233581	0.191086	NKX3-2.p2	NM_177680|Ythdc1|231386|YTH domain containing 1
mm9_v1_chr4_-_91042997_91043190	0.19091	NKX3-2.p2	AK149201|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	AK141919|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001177883|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr11_+_85166665_85166722	0.190902	NKX3-2.p2	NM_001166642|Bcas3|192197|breast carcinoma amplified sequence 3	NM_001166643|Bcas3|192197|breast carcinoma amplified sequence 3	NM_138681|Bcas3|192197|breast carcinoma amplified sequence 3	AK034117|Bcas3|192197|breast carcinoma amplified sequence 3	AF313800|Bcas3|192197|breast carcinoma amplified sequence 3	BC050233|Bcas3|192197|breast carcinoma amplified sequence 3	AK160127|Bcas3|192197|breast carcinoma amplified sequence 3	BC028339|Bcas3|192197|breast carcinoma amplified sequence 3	BC086693|Bcas3|192197|breast carcinoma amplified sequence 3	BC060690|Bcas3|192197|breast carcinoma amplified sequence 3	AK171964|Bcas3|192197|breast carcinoma amplified sequence 3	AK032423|Bcas3|192197|breast carcinoma amplified sequence 3	AK157222|Bcas3|192197|breast carcinoma amplified sequence 3	BC038173|Bcas3|192197|breast carcinoma amplified sequence 3
mm9_v1_chr18_-_57085168_57085209	0.190858	NKX3-2.p2	AK036622|March3|320253|membrane-associated ring finger (C3HC4) 3	AK029887|March3|320253|membrane-associated ring finger (C3HC4) 3	AK041088|March3|320253|membrane-associated ring finger (C3HC4) 3	NM_177115|March3|320253|membrane-associated ring finger (C3HC4) 3	AK018160|March3|320253|membrane-associated ring finger (C3HC4) 3
mm9_v1_chr15_+_83610459_83610521	0.190493	NKX3-2.p2	AK165755|Mpped1|223726|metallophosphoesterase domain containing 1
mm9_v1_chrX_-_92391841_92391855	0.190034	NKX3-2.p2	AK163874|Arhgef9|236915|CDC42 guanine nucleotide exchange factor (GEF) 9
mm9_v1_chr17_-_74715708_74715816	0.189773	NKX3-2.p2	NM_001146222|Dpy30|66310|dpy-30 homolog (C. elegans)	BC002240|Dpy30|66310|dpy-30 homolog (C. elegans)	AK013073|Dpy30|66310|dpy-30 homolog (C. elegans)	AK077902|Dpy30|66310|dpy-30 homolog (C. elegans)	NM_001146223|Dpy30|66310|dpy-30 homolog (C. elegans)
mm9_v1_chr14_-_66899764_66899954	0.188624	NKX3-2.p2	AK158980|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	AK054002|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	AK150105|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	AK041878|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	AK088696|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	NM_001162365|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	NM_172498|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta
mm9_v1_chr7_+_53039273_53039322	0.188593	NKX3-2.p2	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr11_+_56825192_56825257	0.1883	NKX3-2.p2	NM_001113325|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	NM_008165|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr15_-_78236262_78236306	0.187669	NKX3-2.p2	CT010210|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	U35741|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	BC005644|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	NM_009437|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	AK003953|Tst|22117|thiosulfate sulfurtransferase, mitochondrial
mm9_v1_chr7_+_98239427_98239516	0.187191	NKX3-2.p2	AF388675|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr1_-_167638156_167638224	0.186594	NKX3-2.p2	AK158429|Rcsd1|226594|RCSD domain containing 1	AK133961|Rcsd1|226594|RCSD domain containing 1	AK168816|Rcsd1|226594|RCSD domain containing 1	AK171323|Rcsd1|226594|RCSD domain containing 1	NM_001038846|Rcsd1|226594|RCSD domain containing 1	NM_178593|Rcsd1|226594|RCSD domain containing 1
mm9_v1_chr5_+_89315839_89315847	0.186341	NKX3-2.p2	AK140443|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4
mm9_v1_chr1_+_189821727_189821874	0.186266	NKX3-2.p2	BC082324|Esrrg|26381|estrogen-related receptor gamma	NM_011935|Esrrg|26381|estrogen-related receptor gamma	AB093266|Esrrg|26381|estrogen-related receptor gamma	AF117254|Esrrg|26381|estrogen-related receptor gamma	AB221580|Esrrg|26381|estrogen-related receptor gamma
mm9_v1_chr9_-_53916173_53916217	0.185926	NKX3-2.p2	AK036953|Tnfaip8l3|244882|tumor necrosis factor, alpha-induced protein 8-like 3	AK154109|Tnfaip8l3|244882|tumor necrosis factor, alpha-induced protein 8-like 3	AK170374|Tnfaip8l3|244882|tumor necrosis factor, alpha-induced protein 8-like 3	BC119769|Tnfaip8l3|244882|tumor necrosis factor, alpha-induced protein 8-like 3	BC118003|Tnfaip8l3|244882|tumor necrosis factor, alpha-induced protein 8-like 3	AK171174|Tnfaip8l3|244882|tumor necrosis factor, alpha-induced protein 8-like 3	NM_001033535|Tnfaip8l3|244882|tumor necrosis factor, alpha-induced protein 8-like 3
mm9_v1_chr2_+_35516774_35517011	0.18547	NKX3-2.p2	AY305656|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr3_-_130412360_130412367	0.185373	NKX3-2.p2	NM_025509|Ostc|66357|oligosaccharyltransferase complex subunit
mm9_v1_chr13_-_46060354_46060386	0.185022	NKX3-2.p2	AK165114|Atxn1|20238|ataxin 1	AK037692|Atxn1|20238|ataxin 1
mm9_v1_chr18_-_62071256_62071263	0.184904	NKX3-2.p2	AK086538|Ablim3|319713|actin binding LIM protein family, member 3
mm9_v1_chr18_+_66033139_66033147	0.184793	NKX3-2.p2	AK139345|Grp|225642|gastrin releasing peptide	AK133508|Grp|225642|gastrin releasing peptide	BC024515|Grp|225642|gastrin releasing peptide	NM_175012|Grp|225642|gastrin releasing peptide
mm9_v1_chr3_-_80606704_80606756	0.184783	NKX3-2.p2	AK163941|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK046861|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001039195|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001083806|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_013540|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK014389|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr6_+_141472906_141473070	0.184397	NKX3-2.p2	AK045782|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_001177772|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_021471|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK048926|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK161010|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	BC078456|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AY007379|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1
mm9_v1_chr11_+_45869473_45869501	0.183785	NKX3-2.p2	NM_009616|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC093480|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chr12_+_118772389_118772432	0.183644	NKX3-2.p2	AK162220|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr1_-_175297778_175297829	0.183596	NKX3-2.p2	AK036352|Cadm3|94332|cell adhesion molecule 3	AK053077|Cadm3|94332|cell adhesion molecule 3	AK038917|Cadm3|94332|cell adhesion molecule 3	NM_053199|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr16_+_49855786_49855899	0.183545	NKX3-2.p2	AK151922|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	AB012693|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	BC012667|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr3_-_107957795_107957821	0.183537	NKX3-2.p2	AK032627|Gpr61|229714|G protein-coupled receptor 61	AK133702|Gpr61|229714|G protein-coupled receptor 61	NM_175470|Gpr61|229714|G protein-coupled receptor 61
mm9_v1_chr4_+_56815385_56815495	0.182255	NKX3-2.p2	AK052647|BC026590|230234|cDNA sequence BC026590	AK164596|BC026590|230234|cDNA sequence BC026590
mm9_v1_chr2_+_16277963_16277989	0.18194	NKX3-2.p2	AK019482|Plxdc2|67448|plexin domain containing 2	AK154921|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr7_+_108985016_108985132	0.181355	NKX3-2.p2	
mm9_v1_chr4_-_61748264_61748345	0.181214	NKX3-2.p2	EU882235|Mup3|17842|major urinary protein 3	M27608|Mup3|17842|major urinary protein 3	X03525|Mup3|17842|major urinary protein 3	BC019965|Mup3|17842|major urinary protein 3	BC106100|Mup3|17842|major urinary protein 3	BC059102|Mup3|17842|major urinary protein 3	NM_001039544|Mup3|17842|major urinary protein 3
mm9_v1_chr10_+_62706550_62706579	0.180775	NKX3-2.p2	AK019546|Herc4|67345|hect domain and RLD 4
mm9_v1_chr7_+_27904981_27904993	0.180647	NKX3-2.p2	M77497|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr17_-_25393220_25393308	0.179637	NKX3-2.p2	BC158116|Baiap3|545192|BAI1-associated protein 3	NM_001163270|Baiap3|545192|BAI1-associated protein 3
mm9_v1_chr11_-_97436439_97436456	0.179335	NKX3-2.p2	AF040944|Srcin1|56013|SRC kinase signaling inhibitor 1	NM_018873|Srcin1|56013|SRC kinase signaling inhibitor 1	U59873|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr7_+_52580310_52580328	0.178308	NKX3-2.p2	EF437339|Rpl14-ps1|100040970|ribosomal protein L14, pseudogene 1
mm9_v1_chr10_+_21602148_21602174	0.178018	NKX3-2.p2	AK043284|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr3_-_127111968_127111977	0.177912	NKX3-2.p2	AK036018|Ank2|109676|ankyrin 2, brain
mm9_v1_chr1_+_34636537_34636571	0.177631	NKX3-2.p2	NM_213727|Fam123c|211383|family with sequence similarity 123, member C	BC070435|Fam123c|211383|family with sequence similarity 123, member C
mm9_v1_chr2_-_134469754_134469776	0.177533	NKX3-2.p2	BC050918|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK033111|Tmx4|52837|thioredoxin-related transmembrane protein 4
mm9_v1_chr8_+_125748717_125748786	0.177529	NKX3-2.p2	NM_194444|Cdk10|234854|cyclin-dependent kinase 10	NM_194446|Cdk10|234854|cyclin-dependent kinase 10	DQ288857|Cdk10|234854|cyclin-dependent kinase 10	BC017131|Cdk10|234854|cyclin-dependent kinase 10	AK144801|Cdk10|234854|cyclin-dependent kinase 10	AK170594|Cdk10|234854|cyclin-dependent kinase 10	BC052096|Cdk10|234854|cyclin-dependent kinase 10	BC023736|Cdk10|234854|cyclin-dependent kinase 10	AK133918|Cdk10|234854|cyclin-dependent kinase 10
mm9_v1_chr9_+_108957402_108957503	0.177513	NKX3-2.p2	AK081060|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK020877|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK018291|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	NM_026381|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC057089|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC017600|Shisa5|66940|shisa homolog 5 (Xenopus laevis)
mm9_v1_chr6_-_87995185_87995259	0.177338	NKX3-2.p2	AK057671|Rab7|19349|RAB7, member RAS oncogene family	AK159507|Rab7|19349|RAB7, member RAS oncogene family	X89650|Rab7|19349|RAB7, member RAS oncogene family	AK005004|Rab7|19349|RAB7, member RAS oncogene family	AK151078|Rab7|19349|RAB7, member RAS oncogene family	AK152666|Rab7|19349|RAB7, member RAS oncogene family	AK154234|Rab7|19349|RAB7, member RAS oncogene family	AK148117|Rab7|19349|RAB7, member RAS oncogene family
mm9_v1_chrX_-_137908618_137908628	0.177236	NKX3-2.p2	AB041351|Col4a6|94216|collagen, type IV, alpha 6	NM_053185|Col4a6|94216|collagen, type IV, alpha 6
mm9_v1_chr6_+_72389009_72389080	0.176969	NKX3-2.p2	AK145188|4930414L22Rik|78108|RIKEN cDNA 4930414L22 gene
mm9_v1_chr13_+_55050729_55050861	0.176872	NKX3-2.p2	BC058084|Unc5a|107448|unc-5 homolog A (C. elegans)	AJ487852|Unc5a|107448|unc-5 homolog A (C. elegans)	NM_153131|Unc5a|107448|unc-5 homolog A (C. elegans)
mm9_v1_chr9_+_106350967_106351018	0.176791	NKX3-2.p2	NM_029631|Abhd14b|76491|abhydrolase domain containing 14b	BC019410|Abhd14b|76491|abhydrolase domain containing 14b	AK007469|Abhd14b|76491|abhydrolase domain containing 14b
mm9_v1_chr11_-_20731016_20731238	0.17631	NKX3-2.p2	AK041053|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK167557|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	BC019131|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	NM_173752|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK156350|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chrX_+_131252456_131252527	0.176022	NKX3-2.p2	NM_001166377|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166378|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166379|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166380|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_030066|Armcx1|78248|armadillo repeat containing, X-linked 1	BC026488|Armcx1|78248|armadillo repeat containing, X-linked 1	AK147002|Armcx1|78248|armadillo repeat containing, X-linked 1	BC068228|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr2_+_156546758_156546851	0.175601	NKX3-2.p2	AK089484|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AK150554|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AK156212|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AK211649|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AF073935|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)
mm9_v1_chr2_-_34681707_34681829	0.175561	NKX3-2.p2	AK033129|Fbxw2|30050|F-box and WD-40 domain protein 2	AK004015|Fbxw2|30050|F-box and WD-40 domain protein 2	AK005103|Fbxw2|30050|F-box and WD-40 domain protein 2	AK040764|Fbxw2|30050|F-box and WD-40 domain protein 2	AK145405|Fbxw2|30050|F-box and WD-40 domain protein 2	AK133758|Fbxw2|30050|F-box and WD-40 domain protein 2	AK045743|Fbxw2|30050|F-box and WD-40 domain protein 2	AK014858|Fbxw2|30050|F-box and WD-40 domain protein 2	AK184904|Fbxw2|30050|F-box and WD-40 domain protein 2	AK078815|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164769|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164770|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164772|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_013890|Fbxw2|30050|F-box and WD-40 domain protein 2	BC003834|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr4_+_139179011_139179044	0.175277	NKX3-2.p2	AK044712|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1	BC039281|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr4_+_9196439_9196508	0.17506	NKX3-2.p2	AK034888|Clvs1|74438|clavesin 1	AK083985|Clvs1|74438|clavesin 1	AK047462|Clvs1|74438|clavesin 1	AK083810|Clvs1|74438|clavesin 1	NM_028940|Clvs1|74438|clavesin 1	AK084350|Clvs1|74438|clavesin 1	AK043072|Clvs1|74438|clavesin 1	AK032549|Clvs1|74438|clavesin 1	BC062923|Clvs1|74438|clavesin 1
mm9_v1_chr17_+_24769624_24769711	0.174842	NKX3-2.p2	AK033701|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	NM_008743|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	Y09688|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	BC138852|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	BC138855|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	BC145443|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	AB006812|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)
mm9_v1_chr19_-_11945703_11945794	0.174537	NKX3-2.p2	NM_001011775|Olfr1419|257938|olfactory receptor 1419	BC147200|Olfr1419|257938|olfactory receptor 1419	BC147201|Olfr1419|257938|olfactory receptor 1419
mm9_v1_chr1_-_33871261_33871282	0.174528	NKX3-2.p2	AK122541|Zfp451|98403|zinc finger protein 451	BC019546|Zfp451|98403|zinc finger protein 451	AK030088|Zfp451|98403|zinc finger protein 451	NM_133817|Zfp451|98403|zinc finger protein 451
mm9_v1_chr8_-_109580565_109580585	0.174493	NKX3-2.p2	BC094654|Cog8|97484|component of oligomeric golgi complex 8	AK156186|Cog8|97484|component of oligomeric golgi complex 8	AK159569|Cog8|97484|component of oligomeric golgi complex 8	AK083734|Cog8|97484|component of oligomeric golgi complex 8	AK145727|Cog8|97484|component of oligomeric golgi complex 8	AK153617|Cog8|97484|component of oligomeric golgi complex 8	AK049957|Cog8|97484|component of oligomeric golgi complex 8
mm9_v1_chr11_+_114529837_114529938	0.17445	NKX3-2.p2	AB037665|Rpl38|67671|ribosomal protein L38	NM_001048057|Rpl38|67671|ribosomal protein L38	NM_023372|Rpl38|67671|ribosomal protein L38	AK002659|Rpl38|67671|ribosomal protein L38	AK010518|Rpl38|67671|ribosomal protein L38	AK012391|Rpl38|67671|ribosomal protein L38	BC055346|Rpl38|67671|ribosomal protein L38	BC034339|Rpl38|67671|ribosomal protein L38	AK010277|Rpl38|67671|ribosomal protein L38	AK151517|Rpl38|67671|ribosomal protein L38	BC047046|Rpl38|67671|ribosomal protein L38
mm9_v1_chr15_+_35301320_35301357	0.174369	NKX3-2.p2	BC158052|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr10_+_13220833_13220918	0.174089	NKX3-2.p2	AK030320|Fuca2|66848|fucosidase, alpha-L- 2, plasma	NM_025799|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK017443|Fuca2|66848|fucosidase, alpha-L- 2, plasma	BC018181|Fuca2|66848|fucosidase, alpha-L- 2, plasma	BC004039|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK159288|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK163042|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK008653|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK002675|Fuca2|66848|fucosidase, alpha-L- 2, plasma	AK146295|Fuca2|66848|fucosidase, alpha-L- 2, plasma	BC094449|Fuca2|66848|fucosidase, alpha-L- 2, plasma
mm9_v1_chr18_-_68459753_68459929	0.173529	NKX3-2.p2	BC038695|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	BC095936|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK159319|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK142190|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK147662|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK034980|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK162396|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK044238|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	AK049567|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene
mm9_v1_chr8_+_96561135_96561146	0.173292	NKX3-2.p2	AK049824|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	BC040267|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr11_-_33063024_33063083	0.17318	NKX3-2.p2	BC085278|Npm1|18148|nucleophosmin 1	BC092378|Npm1|18148|nucleophosmin 1	M33212|Npm1|18148|nucleophosmin 1	NM_008722|Npm1|18148|nucleophosmin 1	BC054755|Npm1|18148|nucleophosmin 1	BC090843|Npm1|18148|nucleophosmin 1	AK088923|Npm1|18148|nucleophosmin 1	AK145124|Npm1|18148|nucleophosmin 1	AK150164|Npm1|18148|nucleophosmin 1	AK153901|Npm1|18148|nucleophosmin 1	AK005498|Npm1|18148|nucleophosmin 1	AK028253|Npm1|18148|nucleophosmin 1	AK135517|Npm1|18148|nucleophosmin 1	AK145813|Npm1|18148|nucleophosmin 1	BC089546|Npm1|18148|nucleophosmin 1	AK005420|Npm1|18148|nucleophosmin 1	AK028370|Npm1|18148|nucleophosmin 1	AK165860|Npm1|18148|nucleophosmin 1	GU214027|Npm1|18148|nucleophosmin 1
mm9_v1_chr9_+_45178485_45178507	0.17308	NKX3-2.p2	BC051127|Fxyd6|59095|FXYD domain-containing ion transport regulator 6	AK003888|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr4_-_86876311_86876327	0.171993	NKX3-2.p2	AK038634|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK034424|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK083127|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr17_+_87682206_87682305	0.171244	NKX3-2.p2	AK040578|Ttc7|225049|tetratricopeptide repeat domain 7	NM_028639|Ttc7|225049|tetratricopeptide repeat domain 7	AK050263|Ttc7|225049|tetratricopeptide repeat domain 7	AK090252|Ttc7|225049|tetratricopeptide repeat domain 7	AK153704|Ttc7|225049|tetratricopeptide repeat domain 7	AK080284|Ttc7|225049|tetratricopeptide repeat domain 7	AK040610|Ttc7|225049|tetratricopeptide repeat domain 7	AK004107|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr5_+_122841885_122841976	0.171006	NKX3-2.p2	AK003485|Arpc3|56378|actin related protein 2/3 complex, subunit 3	AK005437|Arpc3|56378|actin related protein 2/3 complex, subunit 3	AK171651|Arpc3|56378|actin related protein 2/3 complex, subunit 3	BC013618|Arpc3|56378|actin related protein 2/3 complex, subunit 3	NM_019824|Arpc3|56378|actin related protein 2/3 complex, subunit 3	BC054440|Arpc3|56378|actin related protein 2/3 complex, subunit 3	BC055036|Arpc3|56378|actin related protein 2/3 complex, subunit 3
mm9_v1_chr7_-_30303557_30303638	0.169542	NKX3-2.p2	AK172968|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3	AK041920|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3
mm9_v1_chr2_+_169458802_169458807	0.169533	NKX3-2.p2	BC079877|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr7_-_35015309_35015367	0.169132	NKX3-2.p2	AK147124|Gpi1|14751|glucose phosphate isomerase 1	NM_008155|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr5_+_100468998_100469257	0.16879	NKX3-2.p2	AK167575|Enoph1|67870|enolase-phosphatase 1	NM_001163035|Enoph1|67870|enolase-phosphatase 1	NM_026421|Enoph1|67870|enolase-phosphatase 1	AK079062|Enoph1|67870|enolase-phosphatase 1	AK009954|Enoph1|67870|enolase-phosphatase 1	AK082747|Enoph1|67870|enolase-phosphatase 1	AK152021|Enoph1|67870|enolase-phosphatase 1	AK159356|Enoph1|67870|enolase-phosphatase 1	AK168696|Enoph1|67870|enolase-phosphatase 1	AK080714|Enoph1|67870|enolase-phosphatase 1	BC021429|Enoph1|67870|enolase-phosphatase 1	AK177338|Enoph1|67870|enolase-phosphatase 1	AK193770|Enoph1|67870|enolase-phosphatase 1
mm9_v1_chr19_-_8913619_8913779	0.16866	NKX3-2.p2	BC029680|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	AK032646|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	AK004459|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3	NM_010316|Gng3|14704|guanine nucleotide binding protein (G protein), gamma 3
mm9_v1_chr4_+_116768960_116768960	0.168475	NKX3-2.p2	AB010833|Ptch2|19207|patched homolog 2	NM_008958|Ptch2|19207|patched homolog 2
mm9_v1_chr18_+_23573977_23574064	0.168293	NKX3-2.p2	AF143543|Dtna|13527|dystrobrevin alpha	AK019477|Dtna|13527|dystrobrevin alpha	AK003829|Dtna|13527|dystrobrevin alpha	AF143542|Dtna|13527|dystrobrevin alpha	AF143544|Dtna|13527|dystrobrevin alpha
mm9_v1_chr9_+_21807437_21807509	0.167586	NKX3-2.p2	AK153931|Prkcsh|19089|protein kinase C substrate 80K-H	AK159705|Prkcsh|19089|protein kinase C substrate 80K-H	AK137661|Prkcsh|19089|protein kinase C substrate 80K-H	NM_008925|Prkcsh|19089|protein kinase C substrate 80K-H	U92794|Prkcsh|19089|protein kinase C substrate 80K-H	BC009816|Prkcsh|19089|protein kinase C substrate 80K-H
mm9_v1_chr1_-_54614516_54614558	0.166779	NKX3-2.p2	NM_001163314|Pgap1|241062|post-GPI attachment to proteins 1	AK041133|Pgap1|241062|post-GPI attachment to proteins 1	AK051866|Pgap1|241062|post-GPI attachment to proteins 1
mm9_v1_chr7_+_148748114_148748190	0.166032	NKX3-2.p2	AK170980|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	AK128972|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	BC058099|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	AK173054|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	AK088500|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit	AK152463|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr5_+_123157541_123157662	0.165358	NKX3-2.p2	NM_011026|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK150351|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK041904|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK163104|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK162498|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	BC002099|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK162820|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	BC005597|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK153427|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AF089751|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AF089752|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251459|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251460|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251461|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251462|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4
mm9_v1_chr3_-_49561168_49561243	0.165302	NKX3-2.p2	AF416735|Pcdh18|73173|protocadherin 18	AK173204|Pcdh18|73173|protocadherin 18	BC052198|Pcdh18|73173|protocadherin 18	AK036560|Pcdh18|73173|protocadherin 18	AK032820|Pcdh18|73173|protocadherin 18	NM_130448|Pcdh18|73173|protocadherin 18
mm9_v1_chr13_-_69138164_69138176	0.165272	NKX3-2.p2	BC037107|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr9_+_40494347_40494411	0.16511	NKX3-2.p2	AY326421|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr11_+_100943978_100943999	0.164086	NKX3-2.p2	AF521095|Coasy|71743|Coenzyme A synthase	BC064753|Coasy|71743|Coenzyme A synthase
mm9_v1_chr12_+_30219982_30220081	0.164031	NKX3-2.p2	AK049624|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr10_-_58684199_58684290	0.163451	NKX3-2.p2	BC053752|Sept10|103080|septin 10
mm9_v1_chr9_+_57408729_57408820	0.16321	NKX3-2.p2	AK003080|Scamp2|24044|secretory carrier membrane protein 2	AK161002|Scamp2|24044|secretory carrier membrane protein 2	NM_022813|Scamp2|24044|secretory carrier membrane protein 2	AF295402|Scamp2|24044|secretory carrier membrane protein 2	AK171766|Scamp2|24044|secretory carrier membrane protein 2	BC003452|Scamp2|24044|secretory carrier membrane protein 2	BC014751|Scamp2|24044|secretory carrier membrane protein 2
mm9_v1_chr15_+_78765348_78765421	0.162927	NKX3-2.p2	AK083539|Nol12|97961|nucleolar protein 12	NM_133800|Nol12|97961|nucleolar protein 12	AK037035|Nol12|97961|nucleolar protein 12	AK167446|Nol12|97961|nucleolar protein 12	BC094424|Nol12|97961|nucleolar protein 12	BC013701|Nol12|97961|nucleolar protein 12	AY940114|Nol12|97961|nucleolar protein 12	AK036891|Nol12|97961|nucleolar protein 12
mm9_v1_chr3_-_143867852_143867939	0.162808	NKX3-2.p2	AK080534|Lmo4|16911|LIM domain only 4	BC010278|Lmo4|16911|LIM domain only 4	AF096996|Lmo4|16911|LIM domain only 4
mm9_v1_chr1_+_173053280_173053294	0.162758	NKX3-2.p2	BC061017|1700009P17Rik|75472|RIKEN cDNA 1700009P17 gene
mm9_v1_chr3_+_13471643_13471656	0.162475	NKX3-2.p2	NM_001163328|Ralyl|76897|RALY RNA binding protein-like	NM_178631|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr3_-_127201918_127201952	0.162085	NKX3-2.p2	AK036570|Ank2|109676|ankyrin 2, brain
mm9_v1_chr11_-_119960005_119960044	0.162044	NKX3-2.p2	AK154660|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	AK019105|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	BC137580|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	BC144724|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	NM_183137|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene
mm9_v1_chrX_+_7848517_7848554	0.160588	NKX3-2.p2	NM_172479|Slc38a5|209837|solute carrier family 38, member 5	AK054485|Slc38a5|209837|solute carrier family 38, member 5	AK077667|Slc38a5|209837|solute carrier family 38, member 5	BC152401|Slc38a5|209837|solute carrier family 38, member 5	AK155928|Slc38a5|209837|solute carrier family 38, member 5
mm9_v1_chr2_-_120365581_120365597	0.160363	NKX3-2.p2	U59739|Zfp106|20402|zinc finger protein 106
mm9_v1_chr14_+_119498754_119498761	0.160339	NKX3-2.p2	
mm9_v1_chr16_-_18413549_18413586	0.160233	NKX3-2.p2	NM_001111063|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr6_-_56873688_56873808	0.160064	NKX3-2.p2	AK208033|Nt5c3|107569|5'-nucleotidase, cytosolic III
mm9_v1_chr9_+_111341608_111341622	0.159736	NKX3-2.p2	AK050312|Dclk3|245038|doublecortin-like kinase 3	DQ286388|Dclk3|245038|doublecortin-like kinase 3
mm9_v1_chr3_-_142058569_142058593	0.159666	NKX3-2.p2	AK009464|Pdlim5|56376|PDZ and LIM domain 5	AB016586|Pdlim5|56376|PDZ and LIM domain 5	AB016588|Pdlim5|56376|PDZ and LIM domain 5
mm9_v1_chr1_+_129999868_129999934	0.159637	NKX3-2.p2	AK144098|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	NM_181750|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK141150|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	BC049181|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK051765|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)
mm9_v1_chr8_+_12915892_12915957	0.159131	NKX3-2.p2	NM_178076|Mcf2l|17207|mcf.2 transforming sequence-like	AK082849|Mcf2l|17207|mcf.2 transforming sequence-like	AK048898|Mcf2l|17207|mcf.2 transforming sequence-like	BC058622|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr9_-_107673316_107673317	0.159052	NKX3-2.p2	AK161794|Rbm5|83486|RNA binding motif protein 5	BC054820|Rbm5|83486|RNA binding motif protein 5	BC031899|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chr19_+_38911056_38911166	0.158838	NKX3-2.p2	AK172979|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	NM_145952|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138056|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138057|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC145129|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12
mm9_v1_chr11_-_6100164_6100207	0.158763	NKX3-2.p2	AK049739|Nudcd3|209586|NudC domain containing 3	AK171224|Nudcd3|209586|NudC domain containing 3	BC024322|Nudcd3|209586|NudC domain containing 3	AK046219|Nudcd3|209586|NudC domain containing 3	AK030050|Nudcd3|209586|NudC domain containing 3	AK159391|Nudcd3|209586|NudC domain containing 3	AK159458|Nudcd3|209586|NudC domain containing 3	AK170329|Nudcd3|209586|NudC domain containing 3	AK169797|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr7_+_31514580_31514656	0.158469	NKX3-2.p2	AK049951|C630016N16Rik|791088|RIKEN cDNA C630016N16 gene
mm9_v1_chr6_-_115201866_115201882	0.158452	NKX3-2.p2	AK079347|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK140367|Timp4|110595|tissue inhibitor of metalloproteinase 4	NM_080639|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr12_-_31058094_31058250	0.158412	NKX3-2.p2	AF367760|Sntg2|268534|syntrophin, gamma 2	BC058204|Sntg2|268534|syntrophin, gamma 2	BC138956|Sntg2|268534|syntrophin, gamma 2	BC145476|Sntg2|268534|syntrophin, gamma 2	AK008673|Sntg2|268534|syntrophin, gamma 2	AK035310|Sntg2|268534|syntrophin, gamma 2	AK087560|Sntg2|268534|syntrophin, gamma 2	AK137345|Sntg2|268534|syntrophin, gamma 2	NM_172951|Sntg2|268534|syntrophin, gamma 2
mm9_v1_chr11_-_51464543_51464586	0.158195	NKX3-2.p2	BC055831|N4bp3|212706|NEDD4 binding protein 3	NM_145974|N4bp3|212706|NEDD4 binding protein 3
mm9_v1_chr12_-_56593543_56593553	0.158173	NKX3-2.p2	AK161622|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
mm9_v1_chr3_+_89049813_89049887	0.157664	NKX3-2.p2	BC043030|Krtcap2|66059|keratinocyte associated protein 2
mm9_v1_chr1_+_111880313_111880391	0.157516	NKX3-2.p2	AK034096|Cdh7|241201|cadherin 7, type 2	NM_172853|Cdh7|241201|cadherin 7, type 2	AK137369|Cdh7|241201|cadherin 7, type 2
mm9_v1_chr4_-_4065927_4065977	0.157178	NKX3-2.p2	AK047709|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1	AK161272|Penk|18619|preproenkephalin	AK135111|Penk|18619|preproenkephalin
mm9_v1_chr11_-_98261715_98261736	0.157063	NKX3-2.p2	AK170817|Pgap3|320655|post-GPI attachment to proteins 3	AK052486|Pgap3|320655|post-GPI attachment to proteins 3	AK078974|Pgap3|320655|post-GPI attachment to proteins 3	BC035945|Pgap3|320655|post-GPI attachment to proteins 3
mm9_v1_chr14_-_76510534_76510637	0.156901	NKX3-2.p2	AK173238|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	BC029731|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK004707|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK082912|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	NM_026177|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK016681|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene
mm9_v1_chr18_+_37467108_37467135	0.156801	NKX3-2.p2	AK036169|Pcdhb4|93875|protocadherin beta 4	AK143280|Pcdhb4|93875|protocadherin beta 4	AK160730|Pcdhb4|93875|protocadherin beta 4	NM_053129|Pcdhb4|93875|protocadherin beta 4	AK029277|Pcdhb4|93875|protocadherin beta 4	BC053098|Pcdhb4|93875|protocadherin beta 4
mm9_v1_chrX_-_93152262_93152300	0.15598	NKX3-2.p2	AK089160|Las1l|76130|LAS1-like (S. cerevisiae)	NM_152822|Las1l|76130|LAS1-like (S. cerevisiae)	AK163919|Las1l|76130|LAS1-like (S. cerevisiae)
mm9_v1_chr3_+_129539656_129539716	0.155825	NKX3-2.p2	NM_007686|Cfi|12630|complement component factor i	U47810|Cfi|12630|complement component factor i	BC150751|Cfi|12630|complement component factor i
mm9_v1_chr8_+_87560809_87560830	0.154143	NKX3-2.p2	AK154985|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	AK155760|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	NM_145390|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr3_+_51219971_51220063	0.153278	NKX3-2.p2	AF510858|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	BC050017|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm9_v1_chr12_-_56593566_56593633	0.153175	NKX3-2.p2	BC046754|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	U36277|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	AK089215|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	AK151115|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	AK151608|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	NM_010907|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
mm9_v1_chr13_-_46060325_46060353	0.153073	NKX3-2.p2	BC058178|Atxn1|20238|ataxin 1	AK048268|Atxn1|20238|ataxin 1	NM_009124|Atxn1|20238|ataxin 1	AK169931|Atxn1|20238|ataxin 1
mm9_v1_chr10_+_79451332_79451366	0.152846	NKX3-2.p2	AK051845|Cnn2|12798|calponin 2	NM_007725|Cnn2|12798|calponin 2
mm9_v1_chrX_-_137908516_137908603	0.152696	NKX3-2.p2	BC057648|Col4a6|94216|collagen, type IV, alpha 6	AK165178|Col4a6|94216|collagen, type IV, alpha 6
mm9_v1_chr1_+_160292665_160292848	0.152428	NKX3-2.p2	AK147450|Astn1|11899|astrotactin 1	AK138576|Astn1|11899|astrotactin 1	AK045561|Astn1|11899|astrotactin 1	AK165200|Astn1|11899|astrotactin 1	U48797|Astn1|11899|astrotactin 1	AB093222|Astn1|11899|astrotactin 1
mm9_v1_chr16_+_20629926_20630044	0.152305	NKX3-2.p2	AF396699|Ece2|107522|endothelin converting enzyme 2	BC138052|Ece2|107522|endothelin converting enzyme 2	BC138053|Ece2|107522|endothelin converting enzyme 2	BC145126|Ece2|107522|endothelin converting enzyme 2	AK043473|Ece2|107522|endothelin converting enzyme 2
mm9_v1_chrX_-_20498021_20498157	0.152044	NKX3-2.p2	BC022954|Syn1|20964|synapsin I	NM_001110780|Syn1|20964|synapsin I	NM_013680|Syn1|20964|synapsin I
mm9_v1_chr12_+_81744869_81744959	0.151823	NKX3-2.p2	BC058649|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr6_-_124813922_124813935	0.151707	NKX3-2.p2	BC031437|Gpr162|14788|G protein-coupled receptor 162	NM_013533|Gpr162|14788|G protein-coupled receptor 162
mm9_v1_chr6_+_125142154_125142245	0.150974	NKX3-2.p2	AK007615|Mrpl51|66493|mitochondrial ribosomal protein L51	AK012524|Mrpl51|66493|mitochondrial ribosomal protein L51	AK076130|Mrpl51|66493|mitochondrial ribosomal protein L51	BC094621|Mrpl51|66493|mitochondrial ribosomal protein L51	AK007256|Mrpl51|66493|mitochondrial ribosomal protein L51	AK010268|Mrpl51|66493|mitochondrial ribosomal protein L51	NM_025595|Mrpl51|66493|mitochondrial ribosomal protein L51	AK012126|Mrpl51|66493|mitochondrial ribosomal protein L51	BC021535|Mrpl51|66493|mitochondrial ribosomal protein L51	AK011966|Mrpl51|66493|mitochondrial ribosomal protein L51	BC100602|Mrpl51|66493|mitochondrial ribosomal protein L51	AB049960|Mrpl51|66493|mitochondrial ribosomal protein L51
mm9_v1_chr6_+_17256415_17256449	0.150905	NKX3-2.p2	AY439333|Cav1|12389|caveolin 1, caveolae protein	BC052859|Cav1|12389|caveolin 1, caveolae protein	BC038280|Cav1|12389|caveolin 1, caveolae protein	U07645|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr5_+_73398142_73398230	0.150846	NKX3-2.p2	AK087479|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AK149202|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_173403|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC132529|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC138048|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
mm9_v1_chr2_+_60047917_60048030	0.150694	NKX3-2.p2	AK034109|March7|57438|membrane-associated ring finger (C3HC4) 7	AK143177|March7|57438|membrane-associated ring finger (C3HC4) 7	AK166666|March7|57438|membrane-associated ring finger (C3HC4) 7	AK168555|March7|57438|membrane-associated ring finger (C3HC4) 7	AF155739|March7|57438|membrane-associated ring finger (C3HC4) 7	NM_020575|March7|57438|membrane-associated ring finger (C3HC4) 7	AK167246|March7|57438|membrane-associated ring finger (C3HC4) 7
mm9_v1_chr4_-_49857952_49857952	0.150306	NKX3-2.p2	NM_001033351|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chrX_-_16896428_16896493	0.150275	NKX3-2.p2	BC120659|Efhc2|74405|EF-hand domain (C-terminal) containing 2	BC125625|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK016714|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK029501|Efhc2|74405|EF-hand domain (C-terminal) containing 2	NM_028916|Efhc2|74405|EF-hand domain (C-terminal) containing 2
mm9_v1_chr16_-_28929698_28929810	0.150132	NKX3-2.p2	BC085092|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	BC068245|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	NM_177718|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene
mm9_v1_chr12_+_45429966_45429998	0.149725	NKX3-2.p2	AJ543321|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr11_-_79068138_79068204	0.14947	NKX3-2.p2	AK150600|Wsb1|78889|WD repeat and SOCS box-containing 1	AK159905|Wsb1|78889|WD repeat and SOCS box-containing 1	AK146752|Wsb1|78889|WD repeat and SOCS box-containing 1	AK150394|Wsb1|78889|WD repeat and SOCS box-containing 1	AK167942|Wsb1|78889|WD repeat and SOCS box-containing 1	AK169058|Wsb1|78889|WD repeat and SOCS box-containing 1	AK019206|Wsb1|78889|WD repeat and SOCS box-containing 1	AK152545|Wsb1|78889|WD repeat and SOCS box-containing 1	AK167174|Wsb1|78889|WD repeat and SOCS box-containing 1	AK145974|Wsb1|78889|WD repeat and SOCS box-containing 1	AK167394|Wsb1|78889|WD repeat and SOCS box-containing 1	AK168468|Wsb1|78889|WD repeat and SOCS box-containing 1	AK168565|Wsb1|78889|WD repeat and SOCS box-containing 1	NM_019653|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr4_+_41516826_41516894	0.149243	NKX3-2.p2	AK047808|Dnaic1|68922|dynein, axonemal, intermediate chain 1	NM_175138|Dnaic1|68922|dynein, axonemal, intermediate chain 1	BC138785|Dnaic1|68922|dynein, axonemal, intermediate chain 1	BC138787|Dnaic1|68922|dynein, axonemal, intermediate chain 1	AK030213|Dnaic1|68922|dynein, axonemal, intermediate chain 1
mm9_v1_chr14_-_21167269_21167286	0.14876	NKX3-2.p2	AK029169|Ecd|70601|ecdysoneless homolog (Drosophila)
mm9_v1_chr7_-_112748585_112748623	0.148749	NKX3-2.p2	U89889|Hpx|15458|hemopexin	BC011246|Hpx|15458|hemopexin	BC019901|Hpx|15458|hemopexin
mm9_v1_chr3_-_81779636_81779675	0.147893	NKX3-2.p2	U24493|Tdo2|56720|tryptophan 2,3-dioxygenase	BC018390|Tdo2|56720|tryptophan 2,3-dioxygenase	NM_019911|Tdo2|56720|tryptophan 2,3-dioxygenase	AK132271|Tdo2|56720|tryptophan 2,3-dioxygenase
mm9_v1_chr2_-_31007762_31007777	0.147797	NKX3-2.p2	AK085418|D330023K18Rik|320973|RIKEN cDNA D330023K18 gene	AK084630|D330023K18Rik|320973|RIKEN cDNA D330023K18 gene
mm9_v1_chr7_+_90015842_90015842	0.146855	NKX3-2.p2	NM_175366|Mex3b|108797|mex3 homolog B (C. elegans)
mm9_v1_chr4_+_154998982_154998995	0.146001	NKX3-2.p2	L37092|Cdk11b|12537|cyclin-dependent kinase 11B
mm9_v1_chr11_-_79775842_79775900	0.145911	NKX3-2.p2	BC018250|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	BC023920|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	AK084976|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	BC024850|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	AK029151|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	NM_144826|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	AK164010|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)	AK169785|Utp6|216987|UTP6, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr2_+_169459145_169459258	0.145578	NKX3-2.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr8_+_13037791_13037837	0.145392	NKX3-2.p2	AK149449|F10|14058|coagulation factor X	AJ222677|F10|14058|coagulation factor X	AF087644|F10|14058|coagulation factor X	CT010325|F10|14058|coagulation factor X
mm9_v1_chr2_+_179777187_179777250	0.144838	NKX3-2.p2	NM_178750|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	BC054730|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK133944|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr14_-_37911383_37911496	0.144364	NKX3-2.p2	AF426393|Cdhr1|170677|cadherin-related family member 1	BC042454|Cdhr1|170677|cadherin-related family member 1	AK143151|Cdhr1|170677|cadherin-related family member 1	BC058270|Cdhr1|170677|cadherin-related family member 1	NM_130878|Cdhr1|170677|cadherin-related family member 1
mm9_v1_chr8_+_124254462_124254503	0.144312	NKX3-2.p2	AB024449|Jph3|57340|junctophilin 3	NM_020605|Jph3|57340|junctophilin 3	AK046136|Jph3|57340|junctophilin 3	AK082880|Jph3|57340|junctophilin 3	AK045706|Jph3|57340|junctophilin 3	BC103682|Jph3|57340|junctophilin 3	BC104736|Jph3|57340|junctophilin 3	BC105307|Jph3|57340|junctophilin 3
mm9_v1_chr1_-_84692352_84692593	0.143832	NKX3-2.p2	AB067650|Dner|227325|delta/notch-like EGF-related receptor	AF370126|Dner|227325|delta/notch-like EGF-related receptor	AY032924|Dner|227325|delta/notch-like EGF-related receptor	AK044597|Dner|227325|delta/notch-like EGF-related receptor	AK030642|Dner|227325|delta/notch-like EGF-related receptor
mm9_v1_chr8_-_108461909_108462044	0.143472	NKX3-2.p2	CT010274|Psmb10|19171|proteasome (prosome, macropain) subunit, beta type 10	U77784|Psmb10|19171|proteasome (prosome, macropain) subunit, beta type 10	D85561|Psmb10|19171|proteasome (prosome, macropain) subunit, beta type 10	Y10875|Psmb10|19171|proteasome (prosome, macropain) subunit, beta type 10	BC004730|Psmb10|19171|proteasome (prosome, macropain) subunit, beta type 10	AK144096|Psmb10|19171|proteasome (prosome, macropain) subunit, beta type 10
mm9_v1_chr9_-_53822931_53822996	0.143169	NKX3-2.p2	BC049160|Elmod1|270162|ELMO domain containing 1	AK029207|Elmod1|270162|ELMO domain containing 1
mm9_v1_chr17_-_34161584_34161626	0.142982	NKX3-2.p2	AK154962|Ring1|19763|ring finger protein 1	BC009070|Ring1|19763|ring finger protein 1	AK155509|Ring1|19763|ring finger protein 1	NM_009066|Ring1|19763|ring finger protein 1
mm9_v1_chr16_+_20629900_20629923	0.141938	NKX3-2.p2	AK031951|Ece2|107522|endothelin converting enzyme 2	AF489571|Ece2|107522|endothelin converting enzyme 2	AF489572|Ece2|107522|endothelin converting enzyme 2	NM_139293|Ece2|107522|endothelin converting enzyme 2	NM_177942|Ece2|107522|endothelin converting enzyme 2
mm9_v1_chr6_-_115201846_115201865	0.141784	NKX3-2.p2	BC064046|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK038820|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK040814|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr5_+_134575561_134575653	0.14097	NKX3-2.p2	AJ296173|Gatsl2|80909|GATS protein-like 2	AK039122|Gatsl2|80909|GATS protein-like 2	BC094613|Gatsl2|80909|GATS protein-like 2	NM_030719|Gatsl2|80909|GATS protein-like 2	AK052217|Gatsl2|80909|GATS protein-like 2
mm9_v1_chr4_+_137220675_137220705	0.140857	NKX3-2.p2	AK172955|Rap1gap|110351|Rap1 GTPase-activating protein
mm9_v1_chr6_-_21802087_21802170	0.140831	NKX3-2.p2	BC065152|Tspan12|269831|tetraspanin 12	AK033554|Tspan12|269831|tetraspanin 12	BC068240|Tspan12|269831|tetraspanin 12
mm9_v1_chr2_-_11423651_11423672	0.140561	NKX3-2.p2	AF294617|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK154607|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	BC057320|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm9_v1_chr3_-_87734096_87734116	0.140135	NKX3-2.p2	NM_153562|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1
mm9_v1_chr17_-_48061577_48061752	0.140067	NKX3-2.p2	BC057110|Foxp4|74123|forkhead box P4	NM_001110824|Foxp4|74123|forkhead box P4	NM_001110825|Foxp4|74123|forkhead box P4	NM_028767|Foxp4|74123|forkhead box P4
mm9_v1_chr14_+_22569752_22569797	0.139904	NKX3-2.p2	AK006211|Samd8|67630|sterile alpha motif domain containing 8	NM_026283|Samd8|67630|sterile alpha motif domain containing 8	BC116745|Samd8|67630|sterile alpha motif domain containing 8	BC116747|Samd8|67630|sterile alpha motif domain containing 8	AK015593|Samd8|67630|sterile alpha motif domain containing 8	BC100476|Samd8|67630|sterile alpha motif domain containing 8
mm9_v1_chr12_+_87582805_87582876	0.139832	NKX3-2.p2	BC048169|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK031712|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK006185|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	BC058256|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	NM_027405|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK147916|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	BC050782|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK129299|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene
mm9_v1_chr12_-_80108263_80108327	0.139829	NKX3-2.p2	BC066067|Tmem229b|268567|transmembrane protein 229B	NM_178745|Tmem229b|268567|transmembrane protein 229B	AK033403|Tmem229b|268567|transmembrane protein 229B	AK053623|Tmem229b|268567|transmembrane protein 229B
mm9_v1_chr12_-_35591643_35591657	0.139796	NKX3-2.p2	AK087563|Hdac9|79221|histone deacetylase 9
mm9_v1_chr10_-_42722514_42722517	0.139671	NKX3-2.p2	AK019306|Sobp|109205|sine oculis-binding protein homolog (Drosophila)
mm9_v1_chr14_-_96918064_96918252	0.139432	NKX3-2.p2	AK031932|Klhl1|93688|kelch-like 1 (Drosophila)	AF252281|Klhl1|93688|kelch-like 1 (Drosophila)	BC094584|Klhl1|93688|kelch-like 1 (Drosophila)	NM_053105|Klhl1|93688|kelch-like 1 (Drosophila)
mm9_v1_chr17_-_35972880_35972916	0.139263	NKX3-2.p2	AK169398|Tubb5|22154|tubulin, beta 5
mm9_v1_chr17_-_80606526_80606643	0.1385	NKX3-2.p2	AK182977|Srsf7|225027|serine/arginine-rich splicing factor 7	BC025529|Srsf7|225027|serine/arginine-rich splicing factor 7	BC014857|Srsf7|225027|serine/arginine-rich splicing factor 7	BC027391|Srsf7|225027|serine/arginine-rich splicing factor 7	BC024865|Srsf7|225027|serine/arginine-rich splicing factor 7	AK082848|Srsf7|225027|serine/arginine-rich splicing factor 7	AK161652|Srsf7|225027|serine/arginine-rich splicing factor 7
mm9_v1_chr11_+_48650972_48651000	0.137939	NKX3-2.p2	AF220033|Trim7|94089|tripartite motif-containing 7	BC138188|Trim7|94089|tripartite motif-containing 7
mm9_v1_chr9_-_100386803_100386891	0.137427	NKX3-2.p2	BC107263|Il20rb|213208|interleukin 20 receptor beta	BC107264|Il20rb|213208|interleukin 20 receptor beta	BC148190|Il20rb|213208|interleukin 20 receptor beta	NM_001033543|Il20rb|213208|interleukin 20 receptor beta
mm9_v1_chr4_-_58924786_58924804	0.137321	NKX3-2.p2	AK038775|AI314180|230249|expressed sequence AI314180	AK043020|AI314180|230249|expressed sequence AI314180
mm9_v1_chr11_-_110112926_110113089	0.137224	NKX3-2.p2	BC132417|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	BC132419|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK053384|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AF498361|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK042934|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK018242|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK040652|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166556|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166557|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_147218|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6
mm9_v1_chr13_+_118391270_118391304	0.136881	NKX3-2.p2	AJ225123|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1
mm9_v1_chr1_+_67169588_67169639	0.136534	NKX3-2.p2	BC126969|Cps1|227231|carbamoyl-phosphate synthetase 1	NM_001080809|Cps1|227231|carbamoyl-phosphate synthetase 1
mm9_v1_chr7_+_104728398_104728430	0.13634	NKX3-2.p2	AK134242|Rsf1|233532|remodeling and spacing factor 1	NM_001081267|Rsf1|233532|remodeling and spacing factor 1	AK138087|Rsf1|233532|remodeling and spacing factor 1	AK146675|Rsf1|233532|remodeling and spacing factor 1	BC085127|Rsf1|233532|remodeling and spacing factor 1	AK146154|Rsf1|233532|remodeling and spacing factor 1	AK032853|Rsf1|233532|remodeling and spacing factor 1
mm9_v1_chr11_-_116196604_116196673	0.135977	NKX3-2.p2	AK140847|Foxj1|15223|forkhead box J1	BC082543|Foxj1|15223|forkhead box J1	NM_008240|Foxj1|15223|forkhead box J1
mm9_v1_chrX_+_133276320_133276367	0.135883	NKX3-2.p2	AK084423|BC065397|436230|cDNA sequence BC065397
mm9_v1_chr10_-_59079420_59079437	0.135784	NKX3-2.p2	AK166044|Ccdc109a|215999|coiled-coil domain containing 109A	AK083990|Ccdc109a|215999|coiled-coil domain containing 109A
mm9_v1_chr8_+_40068850_40069161	0.13518	NKX3-2.p2	AK132766|Tusc3|80286|tumor suppressor candidate 3	AK088616|Tusc3|80286|tumor suppressor candidate 3	BC069898|Tusc3|80286|tumor suppressor candidate 3	NM_030254|Tusc3|80286|tumor suppressor candidate 3	AK028182|Tusc3|80286|tumor suppressor candidate 3	BC003311|Tusc3|80286|tumor suppressor candidate 3	AK168664|Tusc3|80286|tumor suppressor candidate 3	AK168961|Tusc3|80286|tumor suppressor candidate 3
mm9_v1_chr8_+_72758454_72758471	0.13513	NKX3-2.p2	BC057305|Sugp2|234373|SURP and G patch domain containing 2
mm9_v1_chr15_-_78549197_78549200	0.134696	NKX3-2.p2	BC076582|Elfn2|207393|leucine rich repeat and fibronectin type III, extracellular 2
mm9_v1_chr19_-_10599581_10599698	0.1342	NKX3-2.p2	BC048913|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC038924|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC085277|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK013454|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK075594|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK160957|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK167228|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC058955|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC060090|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	NM_025333|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2
mm9_v1_chr2_+_179854119_179854151	0.133184	NKX3-2.p2	AK161695|Osbpl2|228983|oxysterol binding protein-like 2	AK048537|Osbpl2|228983|oxysterol binding protein-like 2
mm9_v1_chr2_+_130250035_130250123	0.133144	NKX3-2.p2	NM_030559|Vps16|80743|vacuolar protein sorting 16 (yeast)	AK169694|Vps16|80743|vacuolar protein sorting 16 (yeast)	AK162984|Vps16|80743|vacuolar protein sorting 16 (yeast)	AK049872|Vps16|80743|vacuolar protein sorting 16 (yeast)	AB056721|Vps16|80743|vacuolar protein sorting 16 (yeast)
mm9_v1_chr15_+_44027680_44027795	0.132816	NKX3-2.p2	AK134591|Trhr|22045|thyrotropin releasing hormone receptor	NM_013696|Trhr|22045|thyrotropin releasing hormone receptor	M59811|Trhr|22045|thyrotropin releasing hormone receptor	M94384|Trhr|22045|thyrotropin releasing hormone receptor	BC109005|Trhr|22045|thyrotropin releasing hormone receptor	BC109006|Trhr|22045|thyrotropin releasing hormone receptor	BC128269|Trhr|22045|thyrotropin releasing hormone receptor
mm9_v1_chr1_-_170362244_170362272	0.132586	NKX3-2.p2	BC054376|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK037006|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr11_+_77796714_77796777	0.132536	NKX3-2.p2	BC043080|Phf12|268448|PHD finger protein 12
mm9_v1_chr19_+_55390770_55390846	0.132321	NKX3-2.p2	AK135463|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK014541|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK148281|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK030538|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AF035209|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	BC089321|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AF035823|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK028646|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	NM_016862|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	BC012211|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK035895|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
mm9_v1_chr11_-_68666432_68666614	0.131686	NKX3-2.p2	AK011168|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	AF290472|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	AK146029|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)	BC046796|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr17_+_34784077_34784176	0.131423	NKX3-2.p2	BC013534|Atf6b|12915|activating transcription factor 6 beta	AK146671|Atf6b|12915|activating transcription factor 6 beta	NM_017406|Atf6b|12915|activating transcription factor 6 beta	AK090378|Atf6b|12915|activating transcription factor 6 beta	BC052635|Atf6b|12915|activating transcription factor 6 beta	AK159169|Atf6b|12915|activating transcription factor 6 beta	AK170027|Atf6b|12915|activating transcription factor 6 beta	AK143765|Atf6b|12915|activating transcription factor 6 beta
mm9_v1_chr15_+_61869529_61869619	0.131393	NKX3-2.p2	AK043790|Pvt1|19296|plasmacytoma variant translocation 1	AK030859|Pvt1|19296|plasmacytoma variant translocation 1	AK165927|Pvt1|19296|plasmacytoma variant translocation 1	AK043252|Pvt1|19296|plasmacytoma variant translocation 1	AK169445|Pvt1|19296|plasmacytoma variant translocation 1	AK165907|Pvt1|19296|plasmacytoma variant translocation 1	AK090048|Pvt1|19296|plasmacytoma variant translocation 1	AK169927|Pvt1|19296|plasmacytoma variant translocation 1
mm9_v1_chr3_-_108248053_108248111	0.131237	NKX3-2.p2	AK077309|Sars|20226|seryl-aminoacyl-tRNA synthetase	BC008612|Sars|20226|seryl-aminoacyl-tRNA synthetase	BC031932|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK147825|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK082793|Sars|20226|seryl-aminoacyl-tRNA synthetase	NM_011319|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK028358|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK075827|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr12_-_93087514_93087619	0.131233	NKX3-2.p2	AF063095|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK160936|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	BC026816|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK005023|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK146022|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK161546|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK160420|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK005544|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	AK220502|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	NM_001039089|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)	NM_011344|Sel1l|20338|sel-1 suppressor of lin-12-like (C. elegans)
mm9_v1_chr13_-_55423246_55423342	0.131144	NKX3-2.p2	BC028872|Rab24|19336|RAB24, member RAS oncogene family	BC055894|Rab24|19336|RAB24, member RAS oncogene family	BC055914|Rab24|19336|RAB24, member RAS oncogene family	BC019950|Rab24|19336|RAB24, member RAS oncogene family	BC054466|Rab24|19336|RAB24, member RAS oncogene family	AK007602|Rab24|19336|RAB24, member RAS oncogene family	AK160309|Rab24|19336|RAB24, member RAS oncogene family	NM_009000|Rab24|19336|RAB24, member RAS oncogene family
mm9_v1_chr7_+_135390456_135390509	0.13104	NKX3-2.p2	AK158409|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK085042|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK003170|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK087114|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK156423|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	BC002049|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK041233|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143892|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143893|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143894|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1
mm9_v1_chr18_+_65960170_65960280	0.130422	NKX3-2.p2	AK003027|Sec11c|66286|SEC11 homolog C (S. cerevisiae)	AK003411|Sec11c|66286|SEC11 homolog C (S. cerevisiae)	AK007641|Sec11c|66286|SEC11 homolog C (S. cerevisiae)	NM_025468|Sec11c|66286|SEC11 homolog C (S. cerevisiae)
mm9_v1_chr2_-_34769479_34769559	0.130203	NKX3-2.p2	BC027776|Phf19|74016|PHD finger protein 19	AK014380|Phf19|74016|PHD finger protein 19	NM_028716|Phf19|74016|PHD finger protein 19	AK014030|Phf19|74016|PHD finger protein 19
mm9_v1_chr12_-_46175433_46175475	0.130112	NKX3-2.p2	NM_144552|Stxbp6|217517|syntaxin binding protein 6 (amisyn)
mm9_v1_chr15_-_102455518_102455529	0.130079	NKX3-2.p2	AK039648|Atf7|223922|activating transcription factor 7	AK154588|Atf7|223922|activating transcription factor 7	AK155046|Atf7|223922|activating transcription factor 7
mm9_v1_chr17_-_80606644_80606647	0.130055	NKX3-2.p2	AK034952|Srsf7|225027|serine/arginine-rich splicing factor 7	AK137795|Srsf7|225027|serine/arginine-rich splicing factor 7	AK168355|Srsf7|225027|serine/arginine-rich splicing factor 7	NM_001195485|Srsf7|225027|serine/arginine-rich splicing factor 7	NM_001195486|Srsf7|225027|serine/arginine-rich splicing factor 7	NM_001195487|Srsf7|225027|serine/arginine-rich splicing factor 7	NM_146083|Srsf7|225027|serine/arginine-rich splicing factor 7
mm9_v1_chr16_+_36828464_36828529	0.130006	NKX3-2.p2	NM_177128|Iqcb1|320299|IQ calmodulin-binding motif containing 1	BC029084|Iqcb1|320299|IQ calmodulin-binding motif containing 1	AK078554|Iqcb1|320299|IQ calmodulin-binding motif containing 1	AK165220|Iqcb1|320299|IQ calmodulin-binding motif containing 1
mm9_v1_chr15_+_101904294_101904371	0.129585	NKX3-2.p2	BC147746|Eif4b|75705|eukaryotic translation initiation factor 4B	BC147748|Eif4b|75705|eukaryotic translation initiation factor 4B	AK077423|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170256|Eif4b|75705|eukaryotic translation initiation factor 4B	AK148012|Eif4b|75705|eukaryotic translation initiation factor 4B	AK163266|Eif4b|75705|eukaryotic translation initiation factor 4B	AK166363|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168425|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168350|Eif4b|75705|eukaryotic translation initiation factor 4B	AK045250|Eif4b|75705|eukaryotic translation initiation factor 4B	BC036293|Eif4b|75705|eukaryotic translation initiation factor 4B	AK161693|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170354|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr7_-_80703275_80703327	0.129504	NKX3-2.p2	AK140938|1810026B05Rik|69170|RIKEN cDNA 1810026B05 gene
mm9_v1_chr1_+_75518349_75518365	0.129288	NKX3-2.p2	AK171989|Stk11ip|71728|serine/threonine kinase 11 interacting protein	BC042403|Stk11ip|71728|serine/threonine kinase 11 interacting protein
mm9_v1_chr1_-_95375363_95375369	0.12851	NKX3-2.p2	BC023806|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chrX_-_45561726_45561881	0.128348	NKX3-2.p2	BC042618|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK035745|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK079248|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032252|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032233|Zdhhc9|208884|zinc finger, DHHC domain containing 9	NM_172465|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr5_-_112772024_112772077	0.127871	NKX3-2.p2	AK012640|Srrd|70118|SRR1 domain containing	BC107023|Srrd|70118|SRR1 domain containing	BC125007|Srrd|70118|SRR1 domain containing	NM_027323|Srrd|70118|SRR1 domain containing
mm9_v1_chr8_-_107850154_107850175	0.127299	NKX3-2.p2	BC034290|Lrrc29|234684|leucine rich repeat containing 29	AK041606|Lrrc29|234684|leucine rich repeat containing 29	AK042435|Lrrc29|234684|leucine rich repeat containing 29	AK170400|Lrrc29|234684|leucine rich repeat containing 29	AK148120|Lrrc29|234684|leucine rich repeat containing 29	NM_177449|Lrrc29|234684|leucine rich repeat containing 29
mm9_v1_chr4_-_135609269_135609274	0.127102	NKX3-2.p2	BC025077|Rpl11|67025|ribosomal protein L11
mm9_v1_chr13_+_90229271_90229367	0.126925	NKX3-2.p2	NM_025335|Tmem167|66074|transmembrane protein 167	AK021263|Tmem167|66074|transmembrane protein 167	AK032474|Tmem167|66074|transmembrane protein 167	AK161037|Tmem167|66074|transmembrane protein 167	AK031706|Tmem167|66074|transmembrane protein 167	AK007966|Tmem167|66074|transmembrane protein 167	AK019962|Tmem167|66074|transmembrane protein 167	AK016036|Tmem167|66074|transmembrane protein 167	AK012161|Tmem167|66074|transmembrane protein 167	AK002884|Tmem167|66074|transmembrane protein 167	AK088895|Tmem167|66074|transmembrane protein 167	AK160704|Tmem167|66074|transmembrane protein 167	AK007771|Tmem167|66074|transmembrane protein 167	AK132361|Tmem167|66074|transmembrane protein 167	BC085489|Tmem167|66074|transmembrane protein 167
mm9_v1_chr3_+_142364014_142364083	0.126666	NKX3-2.p2	AK145623|Ccbl2|229905|cysteine conjugate-beta lyase 2	AF363737|Ccbl2|229905|cysteine conjugate-beta lyase 2	AK049569|Ccbl2|229905|cysteine conjugate-beta lyase 2	NM_173763|Ccbl2|229905|cysteine conjugate-beta lyase 2	BC085287|Ccbl2|229905|cysteine conjugate-beta lyase 2
mm9_v1_chr15_-_98728930_98728984	0.126202	NKX3-2.p2	BC062810|Dhh|13363|desert hedgehog	AK032466|Dhh|13363|desert hedgehog	AK033392|Dhh|13363|desert hedgehog	NM_007857|Dhh|13363|desert hedgehog
mm9_v1_chr7_-_53922712_53922746	0.126177	NKX3-2.p2	AK157858|Tph1|21990|tryptophan hydroxylase 1	J04758|Tph1|21990|tryptophan hydroxylase 1	NM_001136084|Tph1|21990|tryptophan hydroxylase 1	AF273257|Tph1|21990|tryptophan hydroxylase 1	AK146134|Tph1|21990|tryptophan hydroxylase 1	AK146171|Tph1|21990|tryptophan hydroxylase 1
mm9_v1_chr11_-_70051346_70051356	0.126162	NKX3-2.p2	BC055357|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr7_-_54389053_54389053	0.125968	NKX3-2.p2	NM_013643|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	U28217|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr5_-_9725274_9725369	0.125608	NKX3-2.p2	NM_181850|Grm3|108069|glutamate receptor, metabotropic 3
mm9_v1_chr19_+_10599708_10599823	0.125373	NKX3-2.p2	NM_001164272|Cpsf7|269061|cleavage and polyadenylation specific factor 7	NM_172302|Cpsf7|269061|cleavage and polyadenylation specific factor 7	AK044306|Cpsf7|269061|cleavage and polyadenylation specific factor 7	AK053375|Cpsf7|269061|cleavage and polyadenylation specific factor 7	AK088603|Cpsf7|269061|cleavage and polyadenylation specific factor 7	AK165330|Cpsf7|269061|cleavage and polyadenylation specific factor 7
mm9_v1_chr3_-_157699581_157699608	0.125046	NKX3-2.p2	NM_001093752|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr9_-_82868992_82869032	0.124573	NKX3-2.p2	AJ303103|Phip|83946|pleckstrin homology domain interacting protein	AB049460|Phip|83946|pleckstrin homology domain interacting protein	BC037036|Phip|83946|pleckstrin homology domain interacting protein	AK044935|Phip|83946|pleckstrin homology domain interacting protein	BC049950|Phip|83946|pleckstrin homology domain interacting protein	AK049736|Phip|83946|pleckstrin homology domain interacting protein	AK136530|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr6_-_124813720_124813826	0.124572	NKX3-2.p2	AK144543|Gpr162|14788|G protein-coupled receptor 162	AK158847|Gpr162|14788|G protein-coupled receptor 162	AK134941|Gpr162|14788|G protein-coupled receptor 162	BC016413|Gpr162|14788|G protein-coupled receptor 162
mm9_v1_chr10_+_85061155_85061265	0.124493	NKX3-2.p2	NM_001017525|Btbd11|74007|BTB (POZ) domain containing 11	AK044022|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr17_+_35378690_35378814	0.124441	NKX3-2.p2	NM_019693|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK002779|H2-Q6|110557|histocompatibility 2, Q region locus 6	AK171507|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK051034|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC011067|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC024859|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm9_v1_chr19_-_60950373_60950471	0.124412	NKX3-2.p2	AK002448|Prdx3|11757|peroxiredoxin 3	BC005626|Prdx3|11757|peroxiredoxin 3	M28723|Prdx3|11757|peroxiredoxin 3	NM_007452|Prdx3|11757|peroxiredoxin 3
mm9_v1_chr1_+_139795165_139795180	0.12403	NKX3-2.p2	AK080376|A630083H20Rik|320863|RIKEN cDNA A630083H20 gene	AK040011|A630083H20Rik|320863|RIKEN cDNA A630083H20 gene
mm9_v1_chr12_-_87419813_87420026	0.123971	NKX3-2.p2	AK148385|Tgfb3|21809|transforming growth factor, beta 3	BC094591|Tgfb3|21809|transforming growth factor, beta 3	BC089347|Tgfb3|21809|transforming growth factor, beta 3	AK132519|Tgfb3|21809|transforming growth factor, beta 3	AK145304|Tgfb3|21809|transforming growth factor, beta 3	BC108426|Tgfb3|21809|transforming growth factor, beta 3	NM_009368|Tgfb3|21809|transforming growth factor, beta 3
mm9_v1_chr3_+_89222501_89222609	0.123698	NKX3-2.p2	AK049357|Shc1|20416|src homology 2 domain-containing transforming protein C1	BC036172|Shc1|20416|src homology 2 domain-containing transforming protein C1	U15784|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chrX_+_33652066_33652189	0.12365	NKX3-2.p2	AK154675|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK089984|Il13ra1|16164|interleukin 13 receptor, alpha 1	BC052425|Il13ra1|16164|interleukin 13 receptor, alpha 1	NM_133990|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK080147|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK143292|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK082889|Il13ra1|16164|interleukin 13 receptor, alpha 1	BC059939|Il13ra1|16164|interleukin 13 receptor, alpha 1
mm9_v1_chr10_-_127986030_127986175	0.12313	NKX3-2.p2	U93862|Rpl41|67945|ribosomal protein L41	BC099380|Rpl41|67945|ribosomal protein L41	BC081450|Rpl41|67945|ribosomal protein L41	BC083066|Rpl41|67945|ribosomal protein L41	BC092010|Rpl41|67945|ribosomal protein L41	AK019178|Rpl41|67945|ribosomal protein L41	AK010564|Rpl41|67945|ribosomal protein L41	AK002503|Rpl41|67945|ribosomal protein L41	AK008901|Rpl41|67945|ribosomal protein L41	AK010585|Rpl41|67945|ribosomal protein L41	AK012252|Rpl41|67945|ribosomal protein L41	AK012487|Rpl41|67945|ribosomal protein L41	AK028126|Rpl41|67945|ribosomal protein L41	AK028263|Rpl41|67945|ribosomal protein L41	AK168485|Rpl41|67945|ribosomal protein L41	AK168653|Rpl41|67945|ribosomal protein L41	AK168719|Rpl41|67945|ribosomal protein L41	BC089572|Rpl41|67945|ribosomal protein L41	AK012476|Rpl41|67945|ribosomal protein L41	AK151566|Rpl41|67945|ribosomal protein L41	AK007874|Rpl41|67945|ribosomal protein L41	AK009548|Rpl41|67945|ribosomal protein L41	AK010246|Rpl41|67945|ribosomal protein L41	AK010317|Rpl41|67945|ribosomal protein L41	AK010482|Rpl41|67945|ribosomal protein L41	AK010509|Rpl41|67945|ribosomal protein L41	AK010583|Rpl41|67945|ribosomal protein L41	AK013324|Rpl41|67945|ribosomal protein L41	AK019049|Rpl41|67945|ribosomal protein L41	AK150502|Rpl41|67945|ribosomal protein L41	AK160588|Rpl41|67945|ribosomal protein L41	AK168107|Rpl41|67945|ribosomal protein L41	BC089573|Rpl41|67945|ribosomal protein L41	BC100592|Rpl41|67945|ribosomal protein L41	BC145727|Rpl41|67945|ribosomal protein L41	BC145729|Rpl41|67945|ribosomal protein L41	AK012450|Rpl41|67945|ribosomal protein L41	AK028231|Rpl41|67945|ribosomal protein L41
mm9_v1_chr3_-_127111869_127111953	0.123087	NKX3-2.p2	AK047866|Ank2|109676|ankyrin 2, brain	AK084070|Ank2|109676|ankyrin 2, brain	AK036179|Ank2|109676|ankyrin 2, brain	AK166115|Ank2|109676|ankyrin 2, brain	AK046947|Ank2|109676|ankyrin 2, brain
mm9_v1_chr4_+_56815248_56815272	0.122835	NKX3-2.p2	BC048548|BC026590|230234|cDNA sequence BC026590	BC062190|BC026590|230234|cDNA sequence BC026590
mm9_v1_chr2_-_30997508_30997548	0.122826	NKX3-2.p2	AK157135|Fnbp1|14269|formin binding protein 1	AK122308|Fnbp1|14269|formin binding protein 1	NM_001038700|Fnbp1|14269|formin binding protein 1	NM_001177648|Fnbp1|14269|formin binding protein 1	NM_001177649|Fnbp1|14269|formin binding protein 1	NM_019406|Fnbp1|14269|formin binding protein 1
mm9_v1_chr14_+_52898820_52898820	0.122639	NKX3-2.p2	NM_023434|Tox4|268741|TOX high mobility group box family member 4
mm9_v1_chr2_+_71624985_71625139	0.122586	NKX3-2.p2	AK018033|Itga6|16403|integrin alpha 6	BC049132|Itga6|16403|integrin alpha 6	BC058095|Itga6|16403|integrin alpha 6	X69902|Itga6|16403|integrin alpha 6	AK034186|Itga6|16403|integrin alpha 6	NM_008397|Itga6|16403|integrin alpha 6
mm9_v1_chr4_-_3762743_3762751	0.122584	NKX3-2.p2	AK014594|Rps20|67427|ribosomal protein S20	AK150972|Rps20|67427|ribosomal protein S20	AK002405|Rps20|67427|ribosomal protein S20	AK145656|Rps20|67427|ribosomal protein S20	NM_026147|Rps20|67427|ribosomal protein S20	AK136398|Rps20|67427|ribosomal protein S20
mm9_v1_chrX_-_93152223_93152253	0.122451	NKX3-2.p2	BC032218|Las1l|76130|LAS1-like (S. cerevisiae)	AK018059|Las1l|76130|LAS1-like (S. cerevisiae)	BC141155|Las1l|76130|LAS1-like (S. cerevisiae)
mm9_v1_chr18_+_21160434_21160595	0.122399	NKX3-2.p2	AK136138|Rnf138|56515|ring finger protein 138	AK004238|Rnf138|56515|ring finger protein 138	AK010486|Rnf138|56515|ring finger protein 138	BC003712|Rnf138|56515|ring finger protein 138	AK013419|Rnf138|56515|ring finger protein 138
mm9_v1_chr11_-_108205199_108205207	0.122377	NKX3-2.p2	AK147084|Prkca|18750|protein kinase C, alpha	NM_011101|Prkca|18750|protein kinase C, alpha
mm9_v1_chr7_+_134355216_134355237	0.122328	NKX3-2.p2	AK003149|Mylpf|17907|myosin light chain, phosphorylatable, fast skeletal muscle	BC055869|Mylpf|17907|myosin light chain, phosphorylatable, fast skeletal muscle
mm9_v1_chr3_-_126928844_126928867	0.122232	NKX3-2.p2	AK044093|Ank2|109676|ankyrin 2, brain
mm9_v1_chr7_+_96780900_96781043	0.12212	NKX3-2.p2	AK133593|Me3|109264|malic enzyme 3, NADP(+)-dependent, mitochondrial	AK036221|Me3|109264|malic enzyme 3, NADP(+)-dependent, mitochondrial
mm9_v1_chr14_+_21526757_21526874	0.1221	NKX3-2.p2	AK147398|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	NM_027996|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	AK053265|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151046|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151056|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151173|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC172103|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene
mm9_v1_chr16_+_18248964_18249010	0.121944	NKX3-2.p2	AK017819|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK134368|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001080999|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001081000|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001195205|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
mm9_v1_chr15_+_80808194_80808235	0.121705	NKX3-2.p2	NM_134091|Sgsm3|105835|small G protein signaling modulator 3	AK142314|Sgsm3|105835|small G protein signaling modulator 3	AK170806|Sgsm3|105835|small G protein signaling modulator 3	BC018197|Sgsm3|105835|small G protein signaling modulator 3	BC024122|Sgsm3|105835|small G protein signaling modulator 3
mm9_v1_chr6_+_112996326_112996377	0.121682	NKX3-2.p2	U83176|Thumpd3|14911|THUMP domain containing 3
mm9_v1_chr1_-_152240082_152240184	0.121635	NKX3-2.p2	NM_001077237|BC003331|226499|cDNA sequence BC003331	NM_145511|BC003331|226499|cDNA sequence BC003331
mm9_v1_chr4_-_41222121_41222174	0.121622	NKX3-2.p2	BC007179|Ubap2|68926|ubiquitin-associated protein 2	NM_026872|Ubap2|68926|ubiquitin-associated protein 2
mm9_v1_chr11_-_21270779_21270881	0.121591	NKX3-2.p2	NM_139297|Ugp2|216558|UDP-glucose pyrophosphorylase 2
mm9_v1_chr9_-_107673318_107673340	0.121148	NKX3-2.p2	AK134183|Rbm5|83486|RNA binding motif protein 5	AK146880|Rbm5|83486|RNA binding motif protein 5	NM_148930|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chrM_+_11027_11268	0.120777	NKX3-2.p2	
mm9_v1_chr8_-_120197535_120197551	0.120735	NKX3-2.p2	BC038819|Sdr42e1|74032|short chain dehydrogenase/reductase family 42E, member 1
mm9_v1_chr15_-_34608840_34608966	0.120541	NKX3-2.p2	AK079085|Nipal2|223473|NIPA-like domain containing 2	BC030399|Nipal2|223473|NIPA-like domain containing 2
mm9_v1_chr3_+_94736974_94736989	0.12045	NKX3-2.p2	AK002447|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr14_-_46277274_46277306	0.120378	NKX3-2.p2	AK048690|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr10_+_127472725_127472748	0.119493	NKX3-2.p2	U22151|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC099375|Naca|17938|nascent polypeptide-associated complex alpha polypeptide
mm9_v1_chr11_-_98448496_98448592	0.119477	NKX3-2.p2	BC046594|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK087497|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK012718|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK154085|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK009621|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	NM_025661|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)
mm9_v1_chr7_-_86531587_86531645	0.11851	NKX3-2.p2	BC016268|Rlbp1|19771|retinaldehyde binding protein 1	AK014227|Rlbp1|19771|retinaldehyde binding protein 1
mm9_v1_chr2_+_30219752_30219824	0.118407	NKX3-2.p2	AK165996|Fam73b|108958|family with sequence similarity 73, member B	AK154200|Fam73b|108958|family with sequence similarity 73, member B	AK140122|Fam73b|108958|family with sequence similarity 73, member B	AK040713|Fam73b|108958|family with sequence similarity 73, member B	AK077618|Fam73b|108958|family with sequence similarity 73, member B
mm9_v1_chr18_+_23573908_23573935	0.11806	NKX3-2.p2	NM_010087|Dtna|13527|dystrobrevin alpha	NM_207650|Dtna|13527|dystrobrevin alpha
mm9_v1_chr13_-_70980619_70980688	0.117865	NKX3-2.p2	AK173338|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	AK031314|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	AK134523|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	NM_172053|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	BC034739|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
mm9_v1_chr18_+_37834003_37834149	0.1177	NKX3-2.p2	AY013797|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr6_+_17256383_17256404	0.117625	NKX3-2.p2	AK003489|Cav1|12389|caveolin 1, caveolae protein	AK035592|Cav1|12389|caveolin 1, caveolae protein	AK028738|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr19_-_5802596_5802674	0.117503	NKX3-2.p2	AK020134|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	AK019083|Ramp2|54409|receptor (calcitonin) activity modifying protein 2	AK084336|Ramp2|54409|receptor (calcitonin) activity modifying protein 2	AK088913|Ramp2|54409|receptor (calcitonin) activity modifying protein 2	EF177380|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	AK009681|Ramp2|54409|receptor (calcitonin) activity modifying protein 2	AK028133|Ramp2|54409|receptor (calcitonin) activity modifying protein 2
mm9_v1_chr2_+_151528046_151528155	0.117001	NKX3-2.p2	AK043999|5430405G05Rik|108832|RIKEN cDNA 5430405G05 gene
mm9_v1_chr11_+_60268108_60268134	0.11669	NKX3-2.p2	AJ243590|Drg2|13495|developmentally regulated GTP binding protein 2	NM_021354|Drg2|13495|developmentally regulated GTP binding protein 2
mm9_v1_chr1_-_64167818_64167853	0.116647	NKX3-2.p2	AF327568|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr2_+_136539143_136539198	0.116605	NKX3-2.p2	NM_011428|Snap25|20614|synaptosomal-associated protein 25	AK078038|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr17_-_36116110_36116229	0.116562	NKX3-2.p2	AK218162|Prr3|75210|proline-rich polypeptide 3	AK016009|Prr3|75210|proline-rich polypeptide 3
mm9_v1_chr2_+_90780646_90780662	0.116534	NKX3-2.p2	AK143698|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr11_+_43287798_43287813	0.116123	NKX3-2.p2	AK007683|C1qtnf2|69183|C1q and tumor necrosis factor related protein 2
mm9_v1_chr9_-_21807054_21807077	0.115774	NKX3-2.p2	AK021166|Ccdc151|77609|coiled-coil domain containing 151	AK031175|Ccdc151|77609|coiled-coil domain containing 151	NM_001163787|Ccdc151|77609|coiled-coil domain containing 151	NM_029939|Ccdc151|77609|coiled-coil domain containing 151
mm9_v1_chr2_+_167514414_167514452	0.115626	NKX3-2.p2	NM_009883|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta	X62600|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chr13_+_114584715_114584832	0.115529	NKX3-2.p2	NM_172595|Arl15|218639|ADP-ribosylation factor-like 15	AK039965|Arl15|218639|ADP-ribosylation factor-like 15	AK052164|Arl15|218639|ADP-ribosylation factor-like 15	AK053953|Arl15|218639|ADP-ribosylation factor-like 15	AK050979|Arl15|218639|ADP-ribosylation factor-like 15	BC120664|Arl15|218639|ADP-ribosylation factor-like 15	BC120666|Arl15|218639|ADP-ribosylation factor-like 15	BC144993|Arl15|218639|ADP-ribosylation factor-like 15	AK048736|Arl15|218639|ADP-ribosylation factor-like 15
mm9_v1_chr7_+_134072351_134072419	0.115309	NKX3-2.p2	AK075722|Kctd13|233877|potassium channel tetramerisation domain containing 13	NM_172747|Kctd13|233877|potassium channel tetramerisation domain containing 13	BC079607|Kctd13|233877|potassium channel tetramerisation domain containing 13	AF534881|Kctd13|233877|potassium channel tetramerisation domain containing 13
mm9_v1_chr15_+_9365782_9365824	0.115193	NKX3-2.p2	AK006467|Capsl|75568|calcyphosine-like	NM_029341|Capsl|75568|calcyphosine-like	BC061015|Capsl|75568|calcyphosine-like
mm9_v1_chr7_-_31514527_31514579	0.115175	NKX3-2.p2	AK010168|Tmem147|69804|transmembrane protein 147	AK160267|Tmem147|69804|transmembrane protein 147	NM_027215|Tmem147|69804|transmembrane protein 147
mm9_v1_chr4_-_15076093_15076277	0.115152	NKX3-2.p2	AK039240|Necab1|69352|N-terminal EF-hand calcium binding protein 1	AK081951|Necab1|69352|N-terminal EF-hand calcium binding protein 1	AY278200|Necab1|69352|N-terminal EF-hand calcium binding protein 1	BC067055|Necab1|69352|N-terminal EF-hand calcium binding protein 1	NM_178617|Necab1|69352|N-terminal EF-hand calcium binding protein 1
mm9_v1_chr1_+_169528838_169528848	0.115048	NKX3-2.p2	M84819|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr16_-_23890909_23890942	0.11485	NKX3-2.p2	BC010770|Sst|20604|somatostatin	AK003014|Sst|20604|somatostatin	NM_009215|Sst|20604|somatostatin
mm9_v1_chrX_+_147481712_147481775	0.11483	NKX3-2.p2	AK148151|Fgd1|14163|FYVE, RhoGEF and PH domain containing 1	BC011462|Fgd1|14163|FYVE, RhoGEF and PH domain containing 1	NM_008001|Fgd1|14163|FYVE, RhoGEF and PH domain containing 1
mm9_v1_chr3_-_36589048_36589088	0.114487	NKX3-2.p2	AK082063|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	AK080619|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	AK032317|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	NM_019510|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3
mm9_v1_chr4_-_116300068_116300103	0.114419	NKX3-2.p2	BC004693|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AF095722|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AK008295|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AK083333|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	NM_001081475|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)
mm9_v1_chr16_+_19760300_19760490	0.114414	NKX3-2.p2	AK037166|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK083839|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_001159407|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_001159408|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_054052|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK032911|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK048010|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	BC063076|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm9_v1_chr4_+_122860705_122860828	0.11428	NKX3-2.p2	AK032591|Hpcal4|170638|hippocalcin-like 4	NM_174998|Hpcal4|170638|hippocalcin-like 4
mm9_v1_chr1_+_173259275_173259328	0.11423	NKX3-2.p2	NM_001128609|Dedd|21945|death effector domain-containing	NM_011615|Dedd|21945|death effector domain-containing	AK157609|Dedd|21945|death effector domain-containing
mm9_v1_chr12_-_84938095_84938119	0.114144	NKX3-2.p2	AK170954|Zfyve1|217695|zinc finger, FYVE domain containing 1	NM_183154|Zfyve1|217695|zinc finger, FYVE domain containing 1	AK139825|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr12_-_73509537_73509656	0.114047	NKX3-2.p2	AB074899|Rtn1|104001|reticulon 1	CT010392|Rtn1|104001|reticulon 1	BC030455|Rtn1|104001|reticulon 1
mm9_v1_chr2_+_179854008_179854109	0.113708	NKX3-2.p2	AK145292|Osbpl2|228983|oxysterol binding protein-like 2	AK170669|Osbpl2|228983|oxysterol binding protein-like 2	NM_144500|Osbpl2|228983|oxysterol binding protein-like 2	BC026804|Osbpl2|228983|oxysterol binding protein-like 2	AK170306|Osbpl2|228983|oxysterol binding protein-like 2	AK166059|Osbpl2|228983|oxysterol binding protein-like 2
mm9_v1_chr2_+_120834184_120834246	0.113648	NKX3-2.p2	AK154285|Ccndbp1|17151|cyclin D-type binding-protein 1	BC001984|Ccndbp1|17151|cyclin D-type binding-protein 1	AK163150|Ccndbp1|17151|cyclin D-type binding-protein 1	BC005802|Ccndbp1|17151|cyclin D-type binding-protein 1	U50734|Ccndbp1|17151|cyclin D-type binding-protein 1
mm9_v1_chr10_-_41738158_41738199	0.113639	NKX3-2.p2	AK011447|Armc2|213402|armadillo repeat containing 2	NM_001034858|Armc2|213402|armadillo repeat containing 2
mm9_v1_chr4_-_148500769_148500849	0.113344	NKX3-2.p2	AF013253|Cort|12854|cortistatin	AK013496|Cort|12854|cortistatin	NM_007745|Cort|12854|cortistatin
mm9_v1_chr1_+_94728419_94728433	0.113118	NKX3-2.p2	BC062902|Gpc1|14733|glypican 1
mm9_v1_chr8_+_114167342_114167436	0.112715	NKX3-2.p2	NM_001037665|Zfp1|22640|zinc finger protein 1	NM_011742|Zfp1|22640|zinc finger protein 1	BC025141|Zfp1|22640|zinc finger protein 1	AK147054|Zfp1|22640|zinc finger protein 1	AK153830|Zfp1|22640|zinc finger protein 1	BC055796|Zfp1|22640|zinc finger protein 1	BC062970|Zfp1|22640|zinc finger protein 1	AK134452|Zfp1|22640|zinc finger protein 1
mm9_v1_chr3_-_127202153_127202192	0.112649	NKX3-2.p2	AK043034|Ank2|109676|ankyrin 2, brain
mm9_v1_chr10_-_30320470_30320554	0.112631	NKX3-2.p2	BC048703|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AK014181|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AK010722|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AK032943|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AF532979|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	NM_028604|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)
mm9_v1_chr2_-_165113250_165113360	0.112105	NKX3-2.p2	AK170715|Slc35c2|228875|solute carrier family 35, member C2	AK155539|Slc35c2|228875|solute carrier family 35, member C2	BC094025|Slc35c2|228875|solute carrier family 35, member C2	AK053180|Slc35c2|228875|solute carrier family 35, member C2	AK160899|Slc35c2|228875|solute carrier family 35, member C2	BC018327|Slc35c2|228875|solute carrier family 35, member C2	NM_144893|Slc35c2|228875|solute carrier family 35, member C2	AK158331|Slc35c2|228875|solute carrier family 35, member C2
mm9_v1_chr3_+_131227699_131227731	0.111976	NKX3-2.p2	NM_011863|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1
mm9_v1_chr4_-_131394135_131394216	0.111935	NKX3-2.p2	BC080736|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	BC048694|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK052720|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	D88187|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK148515|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_001083119|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_011214|Ptpru|19273|protein tyrosine phosphatase, receptor type, U
mm9_v1_chr13_+_55423357_55423417	0.111836	NKX3-2.p2	AK146857|Prelid1|66494|PRELI domain containing 1	AK153455|Prelid1|66494|PRELI domain containing 1	AK002846|Prelid1|66494|PRELI domain containing 1	AK150465|Prelid1|66494|PRELI domain containing 1	AK151321|Prelid1|66494|PRELI domain containing 1	AK155042|Prelid1|66494|PRELI domain containing 1	AK012144|Prelid1|66494|PRELI domain containing 1	BC025859|Prelid1|66494|PRELI domain containing 1	NM_025596|Prelid1|66494|PRELI domain containing 1	BC098241|Prelid1|66494|PRELI domain containing 1
mm9_v1_chr17_+_35960291_35960382	0.111803	NKX3-2.p2	BC004647|Flot1|14251|flotillin 1	AY167925|Flot1|14251|flotillin 1	NM_008027|Flot1|14251|flotillin 1	U90435|Flot1|14251|flotillin 1	AK150827|Flot1|14251|flotillin 1	AK167323|Flot1|14251|flotillin 1
mm9_v1_chr11_-_59005394_59005458	0.111777	NKX3-2.p2	NM_008193|Guk1|14923|guanylate kinase 1
mm9_v1_chr12_+_45429913_45429941	0.111768	NKX3-2.p2	AK087693|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	AK122252|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr6_-_3713622_3713622	0.111561	NKX3-2.p2	AK133983|Calcr|12311|calcitonin receptor	NM_001042725|Calcr|12311|calcitonin receptor
mm9_v1_chr16_-_60605339_60605356	0.111317	NKX3-2.p2	AK135075|Epha6|13840|Eph receptor A6	AK090366|Epha6|13840|Eph receptor A6	NM_007938|Epha6|13840|Eph receptor A6
mm9_v1_chr12_+_52792192_52792204	0.111132	NKX3-2.p2	BC053339|Ap4s1|11782|adaptor-related protein complex AP-4, sigma 1	AK005283|Ap4s1|11782|adaptor-related protein complex AP-4, sigma 1
mm9_v1_chr15_-_96861590_96861647	0.110647	NKX3-2.p2	BC024072|Slc38a4|69354|solute carrier family 38, member 4	BC024123|Slc38a4|69354|solute carrier family 38, member 4	AB055004|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr19_-_4615180_4615322	0.110512	NKX3-2.p2	BC023156|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr16_+_22892156_22892180	0.110491	NKX3-2.p2	BC019822|Ahsg|11625|alpha-2-HS-glycoprotein
mm9_v1_chr11_-_3271326_3271358	0.110423	NKX3-2.p2	BC086629|Limk2|16886|LIM motif-containing protein kinase 2	AK146099|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr12_+_33639071_33639140	0.110393	NKX3-2.p2	AK049545|Sypl|19027|synaptophysin-like protein	AK049556|Sypl|19027|synaptophysin-like protein	AK030703|Sypl|19027|synaptophysin-like protein	AK159382|Sypl|19027|synaptophysin-like protein	AK159929|Sypl|19027|synaptophysin-like protein	AK033303|Sypl|19027|synaptophysin-like protein	AK167617|Sypl|19027|synaptophysin-like protein	AK052556|Sypl|19027|synaptophysin-like protein	AK154051|Sypl|19027|synaptophysin-like protein
mm9_v1_chr19_-_28754566_28754608	0.110371	NKX3-2.p2	AK054020|Glis3|226075|GLIS family zinc finger 3	DQ871027|Glis3|226075|GLIS family zinc finger 3	NM_175459|Glis3|226075|GLIS family zinc finger 3
mm9_v1_chr4_+_118928045_118928205	0.109807	NKX3-2.p2	AK143945|Cldn19|242653|claudin 19	NM_153105|Cldn19|242653|claudin 19	AF486651|Cldn19|242653|claudin 19	NM_001038590|Cldn19|242653|claudin 19	AK032743|Cldn19|242653|claudin 19	BC114989|Cldn19|242653|claudin 19	BC115827|Cldn19|242653|claudin 19	AF249889|Cldn19|242653|claudin 19
mm9_v1_chr3_-_30868320_30868353	0.109467	NKX3-2.p2	BC132533|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145123|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145124|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AJ414610|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK037348|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK087339|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166208|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166296|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165954|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165955|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165956|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_153421|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chrX_+_110411860_110411875	0.109248	NKX3-2.p2	AK045154|Dach2|93837|dachshund 2 (Drosophila)	NM_001142570|Dach2|93837|dachshund 2 (Drosophila)	NM_033605|Dach2|93837|dachshund 2 (Drosophila)	AF257217|Dach2|93837|dachshund 2 (Drosophila)	BC059233|Dach2|93837|dachshund 2 (Drosophila)
mm9_v1_chr18_+_36124483_36124488	0.109054	NKX3-2.p2	BC066026|Psd2|74002|pleckstrin and Sec7 domain containing 2	NM_028707|Psd2|74002|pleckstrin and Sec7 domain containing 2
mm9_v1_chr2_-_163245205_163245247	0.10858	NKX3-2.p2	BC005579|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	NM_025699|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK009708|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK014323|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK088622|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK153499|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK006969|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene
mm9_v1_chr8_+_72315061_72315156	0.108453	NKX3-2.p2	BC138721|Atp13a1|170759|ATPase type 13A1	BC138722|Atp13a1|170759|ATPase type 13A1	NM_133224|Atp13a1|170759|ATPase type 13A1	AB035381|Atp13a1|170759|ATPase type 13A1	AK052057|Atp13a1|170759|ATPase type 13A1	BC078635|Atp13a1|170759|ATPase type 13A1
mm9_v1_chr11_-_54776398_54776449	0.107638	NKX3-2.p2	AK172890|Tnip1|57783|TNFAIP3 interacting protein 1	AK156131|Tnip1|57783|TNFAIP3 interacting protein 1	BC008665|Tnip1|57783|TNFAIP3 interacting protein 1	AJ242777|Tnip1|57783|TNFAIP3 interacting protein 1	AJ242778|Tnip1|57783|TNFAIP3 interacting protein 1	AK170841|Tnip1|57783|TNFAIP3 interacting protein 1	NM_021327|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr7_-_146374363_146374372	0.107446	NKX3-2.p2	BC026457|Stk32c|57740|serine/threonine kinase 32C	AK046439|Stk32c|57740|serine/threonine kinase 32C	AB041542|Stk32c|57740|serine/threonine kinase 32C
mm9_v1_chr14_+_99498642_99498692	0.107393	NKX3-2.p2	AK017107|Pibf1|52023|progesterone immunomodulatory binding factor 1	NM_029320|Pibf1|52023|progesterone immunomodulatory binding factor 1	NM_029454|Pibf1|52023|progesterone immunomodulatory binding factor 1
mm9_v1_chr4_-_40186722_40186871	0.107199	NKX3-2.p2	BC127163|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC152540|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AY553221|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK052871|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC106095|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK078287|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK155930|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK128929|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC027369|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK087261|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	NM_172689|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
mm9_v1_chr14_-_49686341_49686379	0.106955	NKX3-2.p2	NM_207214|Exoc5|105504|exocyst complex component 5
mm9_v1_chr5_+_3803163_3803177	0.106618	NKX3-2.p2	NM_001170552|Krit1|79264|KRIT1, ankyrin repeat containing	NM_030675|Krit1|79264|KRIT1, ankyrin repeat containing
mm9_v1_chr17_-_25377052_25377092	0.106549	NKX3-2.p2	BC055872|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	NM_172529|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	BC023869|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	AK044021|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	AK078230|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	AY465529|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit
mm9_v1_chrX_-_45562050_45562056	0.10612	NKX3-2.p2	BC090832|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr15_-_94234743_94234766	0.106091	NKX3-2.p2	AK090358|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
mm9_v1_chr11_+_93905501_93905545	0.106061	NKX3-2.p2	AK014060|Spag9|70834|sperm associated antigen 9	AK079365|Spag9|70834|sperm associated antigen 9	NM_001025428|Spag9|70834|sperm associated antigen 9	NM_001025429|Spag9|70834|sperm associated antigen 9	NM_001025430|Spag9|70834|sperm associated antigen 9	AK172961|Spag9|70834|sperm associated antigen 9
mm9_v1_chr3_-_142058595_142058659	0.106046	NKX3-2.p2	AK147999|Pdlim5|56376|PDZ and LIM domain 5	AK003194|Pdlim5|56376|PDZ and LIM domain 5	AK089779|Pdlim5|56376|PDZ and LIM domain 5	NM_001190852|Pdlim5|56376|PDZ and LIM domain 5	NM_001190853|Pdlim5|56376|PDZ and LIM domain 5	NM_001190854|Pdlim5|56376|PDZ and LIM domain 5	NM_001190855|Pdlim5|56376|PDZ and LIM domain 5	NM_001190856|Pdlim5|56376|PDZ and LIM domain 5	NM_019808|Pdlim5|56376|PDZ and LIM domain 5	NM_019809|Pdlim5|56376|PDZ and LIM domain 5
mm9_v1_chr11_+_57332162_57332229	0.10591	NKX3-2.p2	AK076071|Mfap3|216760|microfibrillar-associated protein 3	NM_145426|Mfap3|216760|microfibrillar-associated protein 3	NM_180599|Mfap3|216760|microfibrillar-associated protein 3	AK042988|Mfap3|216760|microfibrillar-associated protein 3	AK080405|Mfap3|216760|microfibrillar-associated protein 3	AK155122|Mfap3|216760|microfibrillar-associated protein 3	BC006828|Mfap3|216760|microfibrillar-associated protein 3
mm9_v1_chr6_-_72389278_72389380	0.105806	NKX3-2.p2	AK190931|Mat2a|232087|methionine adenosyltransferase II, alpha	AK206552|Mat2a|232087|methionine adenosyltransferase II, alpha	AK206774|Mat2a|232087|methionine adenosyltransferase II, alpha	AK213948|Mat2a|232087|methionine adenosyltransferase II, alpha	AK215611|Mat2a|232087|methionine adenosyltransferase II, alpha	AK216312|Mat2a|232087|methionine adenosyltransferase II, alpha	AK219100|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr1_-_157264358_157264387	0.105535	NKX3-2.p2	HQ022853|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131096|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131098|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131102|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF198104|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ022845|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ323679|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ323680|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1
mm9_v1_chr16_+_35983402_35983472	0.105436	NKX3-2.p2	AK169464|Kpna1|16646|karyopherin (importin) alpha 1	AK169311|Kpna1|16646|karyopherin (importin) alpha 1	AK169348|Kpna1|16646|karyopherin (importin) alpha 1	AK028307|Kpna1|16646|karyopherin (importin) alpha 1	AK154800|Kpna1|16646|karyopherin (importin) alpha 1	AK028259|Kpna1|16646|karyopherin (importin) alpha 1	NM_008465|Kpna1|16646|karyopherin (importin) alpha 1	U20619|Kpna1|16646|karyopherin (importin) alpha 1	BC006771|Kpna1|16646|karyopherin (importin) alpha 1
mm9_v1_chr17_+_35400056_35400113	0.105036	NKX3-2.p2	L36068|H2-D1|14964|histocompatibility 2, D region locus 1	M69067|H2-L|14980|histocompatibility 2, D region	M69068|H2-L|14980|histocompatibility 2, D region	M86502|H2-L|14980|histocompatibility 2, D region	U47325|H2-D1|14964|histocompatibility 2, D region locus 1	BC106173|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr2_+_24909898_24909973	0.105009	NKX3-2.p2	NM_001039386|Nelf|56876|nasal embryonic LHRH factor	NM_001039387|Nelf|56876|nasal embryonic LHRH factor	NM_001177654|Nelf|56876|nasal embryonic LHRH factor	NM_001177655|Nelf|56876|nasal embryonic LHRH factor	NM_020276|Nelf|56876|nasal embryonic LHRH factor	AK004986|Nelf|56876|nasal embryonic LHRH factor	AK041478|Nelf|56876|nasal embryonic LHRH factor	AK158803|Nelf|56876|nasal embryonic LHRH factor	AF266508|Nelf|56876|nasal embryonic LHRH factor	AK019560|Nelf|56876|nasal embryonic LHRH factor	BC006642|Nelf|56876|nasal embryonic LHRH factor	AK053402|Nelf|56876|nasal embryonic LHRH factor	AK165300|Nelf|56876|nasal embryonic LHRH factor
mm9_v1_chr2_-_34956162_34956206	0.104987	NKX3-2.p2	BC019541|AI182371|98870|expressed sequence AI182371	BC037995|AI182371|98870|expressed sequence AI182371	AK050413|AI182371|98870|expressed sequence AI182371	BC115979|AI182371|98870|expressed sequence AI182371	BC115986|AI182371|98870|expressed sequence AI182371	NM_178885|AI182371|98870|expressed sequence AI182371	BC094504|AI182371|98870|expressed sequence AI182371	AK050126|AI182371|98870|expressed sequence AI182371
mm9_v1_chr15_+_54577256_54577521	0.104663	NKX3-2.p2	AK081944|Nov|18133|nephroblastoma overexpressed gene	AK081310|Nov|18133|nephroblastoma overexpressed gene	AK136407|Nov|18133|nephroblastoma overexpressed gene	AK155048|Nov|18133|nephroblastoma overexpressed gene	BC003774|Nov|18133|nephroblastoma overexpressed gene	NM_010930|Nov|18133|nephroblastoma overexpressed gene	X96585|Nov|18133|nephroblastoma overexpressed gene	AK039481|Nov|18133|nephroblastoma overexpressed gene	Y09257|Nov|18133|nephroblastoma overexpressed gene
mm9_v1_chr13_+_20564928_20564972	0.104586	NKX3-2.p2	AK053306|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	AK032085|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	BC024727|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	NM_198093|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)
mm9_v1_chr2_+_181099632_181099635	0.104393	NKX3-2.p2	AK041491|Zgpat|229007|zinc finger, CCCH-type with G patch domain	NM_144894|Zgpat|229007|zinc finger, CCCH-type with G patch domain
mm9_v1_chr3_+_37247574_37247574	0.104307	NKX3-2.p2	NM_008006|Fgf2|14173|fibroblast growth factor 2
mm9_v1_chr13_+_120217406_120217406	0.1043	NKX3-2.p2	AK040012|Paip1|218693|polyadenylate binding protein-interacting protein 1	NM_001079849|Paip1|218693|polyadenylate binding protein-interacting protein 1
mm9_v1_chr9_-_62659736_62659749	0.104241	NKX3-2.p2	AK154060|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr7_+_108599819_108599861	0.104171	NKX3-2.p2	AK158354|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK172397|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK170573|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK170395|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr19_+_26822892_26822948	0.103965	NKX3-2.p2	NM_026003|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK011935|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr7_+_25155455_25155523	0.103952	NKX3-2.p2	AB128930|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AF072884|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK085752|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr2_+_152987262_152987297	0.103912	NKX3-2.p2	AK162435|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK048158|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK171487|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC110309|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK088012|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK047497|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK087048|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AB093220|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr17_-_36115915_36115943	0.103799	NKX3-2.p2	BC016636|Prr3|75210|proline-rich polypeptide 3
mm9_v1_chr12_-_72116562_72116603	0.103697	NKX3-2.p2	AK014224|3110056K07Rik|73204|RIKEN cDNA 3110056K07 gene	AK015004|3110056K07Rik|73204|RIKEN cDNA 3110056K07 gene	AK077771|3110056K07Rik|73204|RIKEN cDNA 3110056K07 gene
mm9_v1_chr11_-_116060026_116060114	0.103451	NKX3-2.p2	BC054727|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AK051539|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AB034914|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AK040566|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AK128941|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AF006688|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl
mm9_v1_chr17_-_36179615_36179686	0.10324	NKX3-2.p2	M35243|H2-T22|15039|histocompatibility 2, T region locus 22	M35247|H2-T22|15039|histocompatibility 2, T region locus 22	BC003819|H2-T22|15039|histocompatibility 2, T region locus 22	M35248|H2-T9|15051|histocompatibility 2, T region locus 9	NM_010399|H2-T9|15051|histocompatibility 2, T region locus 9	AK161744|H2-T22|15039|histocompatibility 2, T region locus 22	M35245|H2-T22|15039|histocompatibility 2, T region locus 22	NM_010397|H2-T22|15039|histocompatibility 2, T region locus 22	AK162874|H2-T22|15039|histocompatibility 2, T region locus 22	AK133985|H2-T22|15039|histocompatibility 2, T region locus 22
mm9_v1_chr7_+_112789041_112789105	0.103207	NKX3-2.p2	BC009158|Fxc1|14356|fractured callus expressed transcript 1	NM_019502|Fxc1|14356|fractured callus expressed transcript 1	AK003368|Fxc1|14356|fractured callus expressed transcript 1	AK003421|Fxc1|14356|fractured callus expressed transcript 1
mm9_v1_chr14_-_55735114_55735220	0.103188	NKX3-2.p2	AB099712|Jph4|319984|junctophilin 4	NM_177049|Jph4|319984|junctophilin 4
mm9_v1_chr1_+_60466499_60466554	0.102575	NKX3-2.p2	BC079646|Abi2|329165|abl-interactor 2
mm9_v1_chr6_+_52663700_52663811	0.102432	NKX3-2.p2	NM_025816|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK004574|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK146076|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK171136|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC014798|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1
mm9_v1_chr5_-_38952934_38952968	0.102399	NKX3-2.p2	AK004644|Wdr1|22388|WD repeat domain 1
mm9_v1_chr5_+_31916313_31916404	0.101988	NKX3-2.p2	NM_025796|Mrpl33|66845|mitochondrial ribosomal protein L33	AB049651|Mrpl33|66845|mitochondrial ribosomal protein L33	AK167883|Mrpl33|66845|mitochondrial ribosomal protein L33	AK002421|Mrpl33|66845|mitochondrial ribosomal protein L33	AK008431|Mrpl33|66845|mitochondrial ribosomal protein L33	AK021173|Mrpl33|66845|mitochondrial ribosomal protein L33	AK165856|Mrpl33|66845|mitochondrial ribosomal protein L33	BC059722|Mrpl33|66845|mitochondrial ribosomal protein L33	BC051471|Mrpl33|66845|mitochondrial ribosomal protein L33	BC027018|Mrpl33|66845|mitochondrial ribosomal protein L33	BC037363|Mrpl33|66845|mitochondrial ribosomal protein L33	BC055724|Mrpl33|66845|mitochondrial ribosomal protein L33	AK041771|Mrpl33|66845|mitochondrial ribosomal protein L33	BC006029|Mrpl33|66845|mitochondrial ribosomal protein L33
mm9_v1_chr1_+_173259513_173259641	0.101723	NKX3-2.p2	AK134547|Dedd|21945|death effector domain-containing	AK088329|Dedd|21945|death effector domain-containing	AK157342|Dedd|21945|death effector domain-containing	AK009728|Dedd|21945|death effector domain-containing	BC054445|Dedd|21945|death effector domain-containing
mm9_v1_chr4_-_57155985_57156016	0.101567	NKX3-2.p2	AK165783|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr5_-_22252628_22252724	0.101205	NKX3-2.p2	BC030424|A930003O13Rik|330052|RIKEN cDNA A930003O13 gene	AK044256|A930003O13Rik|330052|RIKEN cDNA A930003O13 gene
mm9_v1_chr9_+_111341538_111341596	0.101155	NKX3-2.p2	NM_172928|Dclk3|245038|doublecortin-like kinase 3	AK135010|Dclk3|245038|doublecortin-like kinase 3
mm9_v1_chr17_-_48061354_48061450	0.100798	NKX3-2.p2	BC043702|Foxp4|74123|forkhead box P4	AY135029|Foxp4|74123|forkhead box P4	BC052407|Foxp4|74123|forkhead box P4	AK004693|Foxp4|74123|forkhead box P4	AB052766|Foxp4|74123|forkhead box P4	BC023368|Foxp4|74123|forkhead box P4	AK143194|Foxp4|74123|forkhead box P4
mm9_v1_chr13_+_24895094_24895151	0.0999271	NKX3-2.p2	BC002217|BC005537|79555|cDNA sequence BC005537
mm9_v1_chrX_+_130829763_130829919	0.099698	NKX3-2.p2	BC042623|Tmem35|67564|transmembrane protein 35	NM_026239|Tmem35|67564|transmembrane protein 35	BC050880|Tmem35|67564|transmembrane protein 35
mm9_v1_chr17_+_33980030_33980035	0.0996517	NKX3-2.p2	AK078151|Cd320|54219|CD320 antigen	AK088189|Cd320|54219|CD320 antigen	NM_019421|Cd320|54219|CD320 antigen
mm9_v1_chr2_+_122564227_122564360	0.0996458	NKX3-2.p2	AK147116|Pldn|18457|pallidin	NM_019788|Pldn|18457|pallidin	BC016554|Pldn|18457|pallidin	AK172571|Pldn|18457|pallidin	AK077720|Pldn|18457|pallidin	AK038381|Pldn|18457|pallidin	BC085260|Pldn|18457|pallidin	AK160580|Pldn|18457|pallidin	AK170964|Pldn|18457|pallidin
mm9_v1_chr11_-_97372344_97372370	0.0993189	NKX3-2.p2	AK051643|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr18_-_21458623_21458645	0.0989748	NKX3-2.p2	AK220564|Fam59a|381126|family with sequence similarity 59, member A	AK148318|Fam59a|381126|family with sequence similarity 59, member A	NM_001033445|Fam59a|381126|family with sequence similarity 59, member A
mm9_v1_chr8_+_119028873_119028914	0.0989103	NKX3-2.p2	BC048623|Dynlrb2|75465|dynein light chain roadblock-type 2	AK005789|Dynlrb2|75465|dynein light chain roadblock-type 2	NM_029297|Dynlrb2|75465|dynein light chain roadblock-type 2
mm9_v1_chr4_+_46151601_46151669	0.0989061	NKX3-2.p2	AK166458|Ncbp1|433702|nuclear cap binding protein subunit 1
mm9_v1_chr9_-_77392505_77392711	0.0986622	NKX3-2.p2	BC087542|Lrrc1|214345|leucine rich repeat containing 1	AK079854|Lrrc1|214345|leucine rich repeat containing 1	BC046591|Lrrc1|214345|leucine rich repeat containing 1	AK051043|Lrrc1|214345|leucine rich repeat containing 1	AK147075|Lrrc1|214345|leucine rich repeat containing 1	NM_001146048|Lrrc1|214345|leucine rich repeat containing 1	AK220166|Lrrc1|214345|leucine rich repeat containing 1
mm9_v1_chr7_-_91827857_91827907	0.0985863	NKX3-2.p2	AK002775|Zfand6|65098|zinc finger, AN1-type domain 6	NM_022985|Zfand6|65098|zinc finger, AN1-type domain 6	AK144902|Zfand6|65098|zinc finger, AN1-type domain 6	AK009403|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr10_-_60846055_60846288	0.0984837	NKX3-2.p2	X99384|X99384|27355|cDNA sequence X99384	BC099531|X99384|27355|cDNA sequence X99384	BC052850|X99384|27355|cDNA sequence X99384	AK088577|X99384|27355|cDNA sequence X99384	AK146489|X99384|27355|cDNA sequence X99384	NM_013753|X99384|27355|cDNA sequence X99384
mm9_v1_chr6_+_124989841_124989878	0.0982534	NKX3-2.p2	AK046126|Ing4|28019|inhibitor of growth family, member 4	AK050522|Ing4|28019|inhibitor of growth family, member 4	AK031633|Ing4|28019|inhibitor of growth family, member 4	AK002821|Ing4|28019|inhibitor of growth family, member 4	AK009267|Ing4|28019|inhibitor of growth family, member 4	NM_133345|Ing4|28019|inhibitor of growth family, member 4	BC009127|Ing4|28019|inhibitor of growth family, member 4	AY035880|Ing4|28019|inhibitor of growth family, member 4	AY035881|Ing4|28019|inhibitor of growth family, member 4	AY036107|Ing4|28019|inhibitor of growth family, member 4
mm9_v1_chr12_+_56937309_56937356	0.098132	NKX3-2.p2	AK154678|Brms1l|52592|breast cancer metastasis-suppressor 1-like	AK155742|Brms1l|52592|breast cancer metastasis-suppressor 1-like	NM_001037756|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr8_+_12395518_12395518	0.0980966	NKX3-2.p2	NM_009233|Sox1|20664|SRY-box containing gene 1
mm9_v1_chr14_+_22320074_22320152	0.0977246	NKX3-2.p2	AK135465|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4	AK048336|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4	AK083123|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4	AK045188|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4
mm9_v1_chr1_+_173433608_173433701	0.0974791	NKX3-2.p2	AK048243|Refbp2|56009|RNA and export factor binding protein 2	NM_019484|Refbp2|56009|RNA and export factor binding protein 2	BC099405|Refbp2|56009|RNA and export factor binding protein 2
mm9_v1_chr5_+_130620730_130620855	0.0974015	NKX3-2.p2	AK162568|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK083583|Kctd7|212919|potassium channel tetramerisation domain containing 7	NM_172509|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK029942|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK034583|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK140606|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC139070|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC141201|Kctd7|212919|potassium channel tetramerisation domain containing 7
mm9_v1_chr7_-_147302283_147302359	0.0970456	NKX3-2.p2	BC002178|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	BC026722|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK167404|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK088018|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK086762|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK154752|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK044954|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK040391|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	NM_053119|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	BC072658|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	BC033275|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
mm9_v1_chr7_+_52882857_52882906	0.0968693	NKX3-2.p2	AK156602|Rasip1|69903|Ras interacting protein 1	BC127059|Rasip1|69903|Ras interacting protein 1	BC028483|Rasip1|69903|Ras interacting protein 1	BC150766|Rasip1|69903|Ras interacting protein 1	NM_028544|Rasip1|69903|Ras interacting protein 1
mm9_v1_chr12_+_45429857_45429887	0.0967551	NKX3-2.p2	AK043838|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_001146031|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_176930|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr7_-_19857121_19857189	0.096645	NKX3-2.p2	BC015289|Vasp|22323|vasodilator-stimulated phosphoprotein	AK170780|Vasp|22323|vasodilator-stimulated phosphoprotein	AK150103|Vasp|22323|vasodilator-stimulated phosphoprotein	AK155480|Vasp|22323|vasodilator-stimulated phosphoprotein	AK140329|Vasp|22323|vasodilator-stimulated phosphoprotein	AK157021|Vasp|22323|vasodilator-stimulated phosphoprotein	AK171302|Vasp|22323|vasodilator-stimulated phosphoprotein	AK171715|Vasp|22323|vasodilator-stimulated phosphoprotein	AF084548|Vasp|22323|vasodilator-stimulated phosphoprotein
mm9_v1_chr5_+_76958331_76958438	0.0965669	NKX3-2.p2	BC064811|Exoc1|69940|exocyst complex component 1	NM_027270|Exoc1|69940|exocyst complex component 1	AK042620|Exoc1|69940|exocyst complex component 1	AK155980|Exoc1|69940|exocyst complex component 1	BC087543|Exoc1|69940|exocyst complex component 1	BC024678|Exoc1|69940|exocyst complex component 1
mm9_v1_chr15_+_4325490_4325644	0.0965602	NKX3-2.p2	AK038575|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_177355|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137637|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137639|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	AK044972|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm9_v1_chr17_-_11033034_11033056	0.0964494	NKX3-2.p2	BC120740|Pacrg|69310|PARK2 co-regulated	AK005771|Pacrg|69310|PARK2 co-regulated	AK135510|Pacrg|69310|PARK2 co-regulated	NM_027032|Pacrg|69310|PARK2 co-regulated
mm9_v1_chr7_+_135390325_135390446	0.0963534	NKX3-2.p2	DQ143891|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	BC056362|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	NM_009365|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1
mm9_v1_chr8_-_129469710_129469776	0.0961512	NKX3-2.p2	AK160168|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	BC099449|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	BC002087|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	NM_024214|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	AK002902|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	AK141367|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)
mm9_v1_chr4_+_104829951_104829954	0.0960267	NKX3-2.p2	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr11_+_110927475_110927548	0.0959329	NKX3-2.p2	AK044915|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	NM_008425|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	X73052|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2
mm9_v1_chr12_+_105316152_105316182	0.095877	NKX3-2.p2	BC031891|Serpina4-ps1|321018|serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1	BC024071|Serpina4-ps1|321018|serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1
mm9_v1_chr9_+_94570310_94570389	0.0958154	NKX3-2.p2	NM_177909|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK037058|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC153825|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC099942|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK172687|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK156494|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm9_v1_chr2_+_170336930_170336945	0.0957958	NKX3-2.p2	AK007940|Pfdn4|109054|prefoldin 4	BC048510|Pfdn4|109054|prefoldin 4
mm9_v1_chr2_+_27297997_27298138	0.0955705	NKX3-2.p2	AK081278|D2Bwg1423e|329372|DNA segment, Chr 2, Brigham & Women's Genetics 1423 expressed	AK038857|D2Bwg1423e|329372|DNA segment, Chr 2, Brigham & Women's Genetics 1423 expressed
mm9_v1_chr3_+_134944239_134944255	0.0955497	NKX3-2.p2	BC036998|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr10_+_92951804_92951841	0.0955028	NKX3-2.p2	AK028963|Hal|15109|histidine ammonia lyase	AK081409|Hal|15109|histidine ammonia lyase	BC057637|Hal|15109|histidine ammonia lyase	L07645|Hal|15109|histidine ammonia lyase
mm9_v1_chr18_+_74375999_74376040	0.0949291	NKX3-2.p2	BC030938|Cxxc1|74322|CXXC finger 1 (PHD domain)
mm9_v1_chr11_+_117193004_117193053	0.0947833	NKX3-2.p2	NM_017380|Sept9|53860|septin 9	AJ250723|Sept9|53860|septin 9
mm9_v1_chr8_+_74764036_74764120	0.0947076	NKX3-2.p2	BC003823|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1	AK215581|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1
mm9_v1_chrX_+_69207922_69207963	0.0944799	NKX3-2.p2	BC137616|Prrg3|208748|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)	BC137619|Prrg3|208748|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
mm9_v1_chr11_+_100181296_100181331	0.094452	NKX3-2.p2	AK150813|Eif1|20918|eukaryotic translation initiation factor 1	AK151575|Eif1|20918|eukaryotic translation initiation factor 1	AK152194|Eif1|20918|eukaryotic translation initiation factor 1	AK169763|Eif1|20918|eukaryotic translation initiation factor 1	AK148032|Eif1|20918|eukaryotic translation initiation factor 1	AK151070|Eif1|20918|eukaryotic translation initiation factor 1	BC003463|Eif1|20918|eukaryotic translation initiation factor 1	NM_011508|Eif1|20918|eukaryotic translation initiation factor 1	BC081429|Eif1|20918|eukaryotic translation initiation factor 1	AF129888|Eif1|20918|eukaryotic translation initiation factor 1	BC010791|Eif1|20918|eukaryotic translation initiation factor 1	BC096691|Eif1|20918|eukaryotic translation initiation factor 1	BC096656|Eif1|20918|eukaryotic translation initiation factor 1
mm9_v1_chr17_+_80689536_80689571	0.0944454	NKX3-2.p2	AY367765|Morn2|378462|MORN repeat containing 2	NM_194269|Morn2|378462|MORN repeat containing 2	BC037365|Morn2|378462|MORN repeat containing 2
mm9_v1_chr9_-_45792865_45792953	0.0941742	NKX3-2.p2	AK164573|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK012116|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	U57747|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK012164|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC003771|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	BC002037|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC056211|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK011326|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK153424|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	NM_008775|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm9_v1_chr9_+_54547190_54547334	0.0940767	NKX3-2.p2	AB032401|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4
mm9_v1_chr2_+_112295120_112295230	0.0939573	NKX3-2.p2	NM_133749|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC080668|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AJ250345|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AJ278128|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK088738|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK013744|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC115477|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC115478|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK182314|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene
mm9_v1_chr2_-_77008655_77008700	0.0937768	NKX3-2.p2	AK045498|Ccdc141|545428|coiled-coil domain containing 141	AK011952|Ccdc141|545428|coiled-coil domain containing 141	AK053175|Ccdc141|545428|coiled-coil domain containing 141	NM_001025576|Ccdc141|545428|coiled-coil domain containing 141	AK041121|Ccdc141|545428|coiled-coil domain containing 141
mm9_v1_chr18_+_57693433_57693535	0.0936941	NKX3-2.p2	AK005868|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene	NM_029290|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene	BC048576|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene	AK019826|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene
mm9_v1_chr3_-_107948968_107949026	0.093408	NKX3-2.p2	BC041107|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	BC003462|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK168578|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK133749|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK169067|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK167438|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm9_v1_chr11_-_54846882_54846976	0.0933901	NKX3-2.p2	AK161625|Anxa6|11749|annexin A6	AK010342|Anxa6|11749|annexin A6	BC005595|Anxa6|11749|annexin A6	AK077843|Anxa6|11749|annexin A6	AK013026|Anxa6|11749|annexin A6	AK030728|Anxa6|11749|annexin A6	AK150035|Anxa6|11749|annexin A6	AK203372|Anxa6|11749|annexin A6	AK179628|Anxa6|11749|annexin A6	AK147066|Anxa6|11749|annexin A6	AK160754|Anxa6|11749|annexin A6	AK146509|Anxa6|11749|annexin A6	AK146592|Anxa6|11749|annexin A6	AK154101|Anxa6|11749|annexin A6	AK087941|Anxa6|11749|annexin A6	AK169774|Anxa6|11749|annexin A6	NM_001110211|Anxa6|11749|annexin A6	NM_013472|Anxa6|11749|annexin A6
mm9_v1_chr12_-_81744771_81744855	0.0933442	NKX3-2.p2	BC107315|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC107316|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC132421|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC132423|Erh|13877|enhancer of rudimentary homolog (Drosophila)	U66870|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC099476|Erh|13877|enhancer of rudimentary homolog (Drosophila)	U01140|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC083141|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK171834|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK010451|Erh|13877|enhancer of rudimentary homolog (Drosophila)	D73368|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK168188|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK080617|Erh|13877|enhancer of rudimentary homolog (Drosophila)	NM_007951|Erh|13877|enhancer of rudimentary homolog (Drosophila)
mm9_v1_chr19_+_46379216_46379289	0.0928327	NKX3-2.p2	NM_001177369|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK144994|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK137680|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK148160|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK150012|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AF155372|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100
mm9_v1_chr12_+_78340039_78340051	0.0926577	NKX3-2.p2	AK134537|Fut8|53618|fucosyltransferase 8
mm9_v1_chr1_-_75274936_75275038	0.0925114	NKX3-2.p2	L34214|Resp18|19711|regulated endocrine-specific protein 18	NM_009049|Resp18|19711|regulated endocrine-specific protein 18
mm9_v1_chr14_+_31292797_31292864	0.0922648	NKX3-2.p2	BC066173|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK047460|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK171707|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr2_+_32576591_32576654	0.092222	NKX3-2.p2	AB043953|Sh2d3c|27387|SH2 domain containing 3C	NM_013781|Sh2d3c|27387|SH2 domain containing 3C	BC113203|Sh2d3c|27387|SH2 domain containing 3C	AF168364|Sh2d3c|27387|SH2 domain containing 3C	AK155165|Sh2d3c|27387|SH2 domain containing 3C	AK172072|Sh2d3c|27387|SH2 domain containing 3C
mm9_v1_chr9_-_99469067_99469110	0.0921962	NKX3-2.p2	AK078280|Armc8|74125|armadillo repeat containing 8	AK083094|Armc8|74125|armadillo repeat containing 8
mm9_v1_chr16_-_15594609_15594629	0.0918628	NKX3-2.p2	NM_001159351|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	NM_023585|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2
mm9_v1_chr2_-_5635228_5635384	0.0917619	NKX3-2.p2	AK052401|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	BC141413|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	BC141414|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr19_+_27291897_27291921	0.0917052	NKX3-2.p2	U06670|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr1_+_169528492_169528646	0.0916372	NKX3-2.p2	NM_009107|Rxrg|20183|retinoid X receptor gamma	BC058401|Rxrg|20183|retinoid X receptor gamma	S62948|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr12_-_99497634_99497668	0.0915897	NKX3-2.p2	AK154760|Galc|14420|galactosylceramidase
mm9_v1_chr17_-_46290499_46290503	0.0915833	NKX3-2.p2	AK156569|Mad2l1bp|66591|MAD2L1 binding protein	NM_025649|Mad2l1bp|66591|MAD2L1 binding protein
mm9_v1_chr10_-_57252252_57252346	0.0910763	NKX3-2.p2	AF181685|Serinc1|56442|serine incorporator 1	AK148745|Serinc1|56442|serine incorporator 1	AK050514|Serinc1|56442|serine incorporator 1	AB029500|Serinc1|56442|serine incorporator 1	AK088340|Serinc1|56442|serine incorporator 1	AK133668|Serinc1|56442|serine incorporator 1	AK133975|Serinc1|56442|serine incorporator 1	AK161707|Serinc1|56442|serine incorporator 1	AK005203|Serinc1|56442|serine incorporator 1	AK167817|Serinc1|56442|serine incorporator 1	AK002847|Serinc1|56442|serine incorporator 1	AK141574|Serinc1|56442|serine incorporator 1	AK160498|Serinc1|56442|serine incorporator 1	AK159436|Serinc1|56442|serine incorporator 1	BC006940|Serinc1|56442|serine incorporator 1	NM_019760|Serinc1|56442|serine incorporator 1
mm9_v1_chr5_-_150438704_150438747	0.0909702	NKX3-2.p2	D67016|Hsph1|15505|heat shock 105kDa/110kDa protein 1	AK083179|Hsph1|15505|heat shock 105kDa/110kDa protein 1
mm9_v1_chr10_-_59079439_59079481	0.0908549	NKX3-2.p2	AK144727|Ccdc109a|215999|coiled-coil domain containing 109A	NM_001033259|Ccdc109a|215999|coiled-coil domain containing 109A
mm9_v1_chr14_-_31832165_31832254	0.0906059	NKX3-2.p2	BC037996|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AY181025|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AY185498|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK087757|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK167183|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	BC018560|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK077523|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)
mm9_v1_chr11_-_118280266_118280405	0.0903786	NKX3-2.p2	AK006565|Cant1|76025|calcium activated nucleotidase 1	AK166384|Cant1|76025|calcium activated nucleotidase 1	AK081118|Cant1|76025|calcium activated nucleotidase 1	AK017942|Cant1|76025|calcium activated nucleotidase 1	AK049879|Cant1|76025|calcium activated nucleotidase 1	NM_001025617|Cant1|76025|calcium activated nucleotidase 1	NM_001025618|Cant1|76025|calcium activated nucleotidase 1	NM_029502|Cant1|76025|calcium activated nucleotidase 1	AK085059|Cant1|76025|calcium activated nucleotidase 1
mm9_v1_chr5_-_23218477_23218493	0.0901736	NKX3-2.p2	AK089743|AI506816|433855|expressed sequence AI506816	AK157274|AI506816|433855|expressed sequence AI506816	AK161191|AI506816|433855|expressed sequence AI506816	AK088877|AI506816|433855|expressed sequence AI506816	AK151523|AI506816|433855|expressed sequence AI506816
mm9_v1_chr9_-_115219177_115219267	0.0901425	NKX3-2.p2	AK145674|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK012153|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK154979|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK148065|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK018758|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AX799084|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	AK170079|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr18_-_68459958_68459986	0.0899408	NKX3-2.p2	AK077093|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	NM_153794|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene
mm9_v1_chr6_-_5143755_5143945	0.0899312	NKX3-2.p2	BC012706|Pon1|18979|paraoxonase 1	U72636|Pon1|18979|paraoxonase 1	U32684|Pon1|18979|paraoxonase 1	NM_011134|Pon1|18979|paraoxonase 1
mm9_v1_chrX_+_132420389_132420476	0.0898678	NKX3-2.p2	NM_001098222|Bhlhb9|70237|basic helix-loop-helix domain containing, class B9	NM_198161|Bhlhb9|70237|basic helix-loop-helix domain containing, class B9	AK157023|Bhlhb9|70237|basic helix-loop-helix domain containing, class B9	AK143861|Bhlhb9|70237|basic helix-loop-helix domain containing, class B9
mm9_v1_chr1_+_173200454_173200531	0.0895541	NKX3-2.p2	NM_020579|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	AK155471|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	BC013619|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	BC004095|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	BC021830|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	AF142671|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
mm9_v1_chr6_-_87995010_87995181	0.0894449	NKX3-2.p2	AK158971|Rab7|19349|RAB7, member RAS oncogene family	AK179526|Rab7|19349|RAB7, member RAS oncogene family	AK190348|Rab7|19349|RAB7, member RAS oncogene family	AK197221|Rab7|19349|RAB7, member RAS oncogene family	AK203105|Rab7|19349|RAB7, member RAS oncogene family	AK159928|Rab7|19349|RAB7, member RAS oncogene family	BC086793|Rab7|19349|RAB7, member RAS oncogene family	BC004597|Rab7|19349|RAB7, member RAS oncogene family
mm9_v1_chr16_-_94748235_94748235	0.0891036	NKX3-2.p2	NM_007834|Dscr3|13185|Down syndrome critical region gene 3
mm9_v1_chr7_-_129164546_129164728	0.0890267	NKX3-2.p2	AK187372|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK129280|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	BC062933|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK004632|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK154904|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK143691|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK159953|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK149798|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	NM_028758|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm9_v1_chr2_-_38142866_38142913	0.0889401	NKX3-2.p2	BC027786|Dennd1a|227801|DENN/MADD domain containing 1A	AK137530|Dennd1a|227801|DENN/MADD domain containing 1A	BC023016|Dennd1a|227801|DENN/MADD domain containing 1A	NM_146122|Dennd1a|227801|DENN/MADD domain containing 1A
mm9_v1_chr7_+_63023547_63023630	0.0888894	NKX3-2.p2	AK139362|Siglech|233274|sialic acid binding Ig-like lectin H	NM_178706|Siglech|233274|sialic acid binding Ig-like lectin H	AK080658|Siglech|233274|sialic acid binding Ig-like lectin H	AK032377|Siglech|233274|sialic acid binding Ig-like lectin H	DQ208935|Siglech|233274|sialic acid binding Ig-like lectin H	BC120501|Siglech|233274|sialic acid binding Ig-like lectin H	BC144741|Siglech|233274|sialic acid binding Ig-like lectin H	BC144742|Siglech|233274|sialic acid binding Ig-like lectin H	BC144743|Siglech|233274|sialic acid binding Ig-like lectin H	BC098229|Siglech|233274|sialic acid binding Ig-like lectin H	AK045719|Siglech|233274|sialic acid binding Ig-like lectin H	AK047813|Siglech|233274|sialic acid binding Ig-like lectin H	DQ157764|Siglech|233274|sialic acid binding Ig-like lectin H
mm9_v1_chr9_+_102910816_102910949	0.0888643	NKX3-2.p2	AK087350|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	AK169706|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	AK166724|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	NM_033314|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	BC035200|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1	AF323958|Slco2a1|24059|solute carrier organic anion transporter family, member 2a1
mm9_v1_chr4_-_3762733_3762742	0.0888164	NKX3-2.p2	BC011323|Rps20|67427|ribosomal protein S20	BC090389|Rps20|67427|ribosomal protein S20	AK150867|Rps20|67427|ribosomal protein S20
mm9_v1_chr5_-_124053691_124053818	0.0887683	NKX3-2.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr10_-_89148966_89149057	0.0886147	NKX3-2.p2	AK052108|Scyl2|213326|SCY1-like 2 (S. cerevisiae)	AK139761|Scyl2|213326|SCY1-like 2 (S. cerevisiae)	AK167276|Scyl2|213326|SCY1-like 2 (S. cerevisiae)	BC042443|Scyl2|213326|SCY1-like 2 (S. cerevisiae)	NM_198021|Scyl2|213326|SCY1-like 2 (S. cerevisiae)
mm9_v1_chr2_-_121944008_121944031	0.0885774	NKX3-2.p2	AK049617|Spg11|214585|spastic paraplegia 11
mm9_v1_chr4_-_153534748_153534817	0.0885377	NKX3-2.p2	BC019544|Tprgl|67808|transformation related protein 63 regulated like	AK004777|Tprgl|67808|transformation related protein 63 regulated like	AK155413|Tprgl|67808|transformation related protein 63 regulated like	NM_026388|Tprgl|67808|transformation related protein 63 regulated like
mm9_v1_chr11_+_51464404_51464468	0.088533	NKX3-2.p2	BC075670|D930048N14Rik|97775|RIKEN cDNA D930048N14 gene	AK086740|D930048N14Rik|97775|RIKEN cDNA D930048N14 gene
mm9_v1_chr8_+_125935441_125935463	0.0884893	NKX3-2.p2	AK012528|Tubb3|22152|tubulin, beta 3	AK051298|Tubb3|22152|tubulin, beta 3	AK082942|Tubb3|22152|tubulin, beta 3	AK149014|Tubb3|22152|tubulin, beta 3	BC088749|Tubb3|22152|tubulin, beta 3	BC031357|Tubb3|22152|tubulin, beta 3	NM_023279|Tubb3|22152|tubulin, beta 3
mm9_v1_chr15_+_90054711_90054794	0.0882453	NKX3-2.p2	AK143038|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK166344|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK147821|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	NM_001033441|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK170450|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK153580|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK171179|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)
mm9_v1_chr6_+_34548512_34548642	0.0877169	NKX3-2.p2	AK032849|Cald1|109624|caldesmon 1	AK050642|Cald1|109624|caldesmon 1	BC055908|Cald1|109624|caldesmon 1
mm9_v1_chr10_+_127774845_127774868	0.0876513	NKX3-2.p2	AK166814|Cs|12974|citrate synthase	AK012151|Cs|12974|citrate synthase	AK145643|Cs|12974|citrate synthase	AK167125|Cs|12974|citrate synthase	AK163273|Cs|12974|citrate synthase
mm9_v1_chr9_-_111174074_111174111	0.0875208	NKX3-2.p2	AK038265|Mlh1|17350|mutL homolog 1 (E. coli)	NM_026810|Mlh1|17350|mutL homolog 1 (E. coli)
mm9_v1_chr11_+_117193732_117193733	0.0870406	NKX3-2.p2	
mm9_v1_chr4_-_58999931_58999958	0.0868797	NKX3-2.p2	BC014865|Ptgr1|67103|prostaglandin reductase 1	AK035425|Ptgr1|67103|prostaglandin reductase 1	AK166835|Ptgr1|67103|prostaglandin reductase 1	NM_025968|Ptgr1|67103|prostaglandin reductase 1
mm9_v1_chr9_+_56266415_56266485	0.0868264	NKX3-2.p2	AK017716|Hmg20a|66867|high mobility group 20A	AK129010|Hmg20a|66867|high mobility group 20A	AK134213|Hmg20a|66867|high mobility group 20A
mm9_v1_chr16_-_4624877_4625001	0.0867712	NKX3-2.p2	AB073618|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	BC024346|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	BC096419|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	AF349454|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	AK003227|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	AK008380|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	NM_025571|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
mm9_v1_chr8_+_130883151_130883243	0.0866662	NKX3-2.p2	AK040447|Nrp1|18186|neuropilin 1	AK030358|Nrp1|18186|neuropilin 1	BC038657|Nrp1|18186|neuropilin 1	AK141964|Nrp1|18186|neuropilin 1	BC051447|Nrp1|18186|neuropilin 1	AK159219|Nrp1|18186|neuropilin 1	BC060129|Nrp1|18186|neuropilin 1
mm9_v1_chr7_+_91040751_91040937	0.0866065	NKX3-2.p2	AK031949|Mesdc2|67943|mesoderm development candidate 2	AK076760|Mesdc2|67943|mesoderm development candidate 2	AK172009|Mesdc2|67943|mesoderm development candidate 2	AK076773|Mesdc2|67943|mesoderm development candidate 2	AK008735|Mesdc2|67943|mesoderm development candidate 2	BC014742|Mesdc2|67943|mesoderm development candidate 2	AK204742|Mesdc2|67943|mesoderm development candidate 2
mm9_v1_chr8_+_74092790_74092825	0.0865684	NKX3-2.p2	BC028937|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	NM_011977|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr11_-_70468061_70468117	0.0863434	NKX3-2.p2	AK028117|Pfn1|18643|profilin 1	AK150780|Pfn1|18643|profilin 1	BC002080|Pfn1|18643|profilin 1
mm9_v1_chr4_-_126645421_126645456	0.0862212	NKX3-2.p2	AK129137|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chrX_+_71542444_71542520	0.0861233	NKX3-2.p2	AK220247|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK158956|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK093961|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	BC048241|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK159449|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK168080|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK161631|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK150333|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK166793|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK159612|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AB031290|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1
mm9_v1_chr10_+_21097094_21097135	0.0860947	NKX3-2.p2	AF510322|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1	AK050298|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1	AK165447|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1	NM_178713|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1	AK143752|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1
mm9_v1_chr1_-_54983211_54983245	0.0857506	NKX3-2.p2	AK038343|Ankrd44|329154|ankyrin repeat domain 44	NM_001081433|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr9_+_63450444_63450525	0.0856864	NKX3-2.p2	AK159897|Aagab|66939|alpha- and gamma-adaptin binding protein	NM_025857|Aagab|66939|alpha- and gamma-adaptin binding protein	BC027311|Aagab|66939|alpha- and gamma-adaptin binding protein	AK017714|Aagab|66939|alpha- and gamma-adaptin binding protein
mm9_v1_chr9_-_79566528_79566565	0.0854646	NKX3-2.p2	AK028536|Col12a1|12816|collagen, type XII, alpha 1
mm9_v1_chr6_-_34126949_34127110	0.0852236	NKX3-2.p2	AK042150|Slc35b4|58246|solute carrier family 35, member B4	AK029046|Slc35b4|58246|solute carrier family 35, member B4	BC033512|Slc35b4|58246|solute carrier family 35, member B4	AK033913|Slc35b4|58246|solute carrier family 35, member B4	BC016275|Slc35b4|58246|solute carrier family 35, member B4	AK045791|Slc35b4|58246|solute carrier family 35, member B4	AK138591|Slc35b4|58246|solute carrier family 35, member B4	AB041549|Slc35b4|58246|solute carrier family 35, member B4	NM_021435|Slc35b4|58246|solute carrier family 35, member B4	AK029969|Slc35b4|58246|solute carrier family 35, member B4
mm9_v1_chr11_-_93816916_93817051	0.0851947	NKX3-2.p2	EF437324|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	AK151262|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	BC086892|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	NM_001077529|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in
mm9_v1_chr11_-_6100014_6100127	0.0851894	NKX3-2.p2	BC052089|Nudcd3|209586|NudC domain containing 3	AK215033|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr12_+_45370145_45370261	0.0851473	NKX3-2.p2	AK004621|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK163211|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK029616|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK168475|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK145776|Pnpla8|67452|patatin-like phospholipase domain containing 8	AB044139|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr13_-_55671276_55671335	0.085138	NKX3-2.p2	AK173303|Fam193b|212483|family with sequence similarity 193, member B	BC025483|Fam193b|212483|family with sequence similarity 193, member B	NM_001162881|Fam193b|212483|family with sequence similarity 193, member B
mm9_v1_chr19_-_5726221_5726316	0.0850289	NKX3-2.p2	BC004660|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305087|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305088|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305089|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305090|Ehbp1l1|114601|EH domain binding protein 1-like 1	AK089917|Ehbp1l1|114601|EH domain binding protein 1-like 1	AK169974|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_001114595|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_001114596|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_001114597|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_053252|Ehbp1l1|114601|EH domain binding protein 1-like 1
mm9_v1_chr2_+_120802698_120802797	0.084711	NKX3-2.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr18_-_62071451_62071482	0.0845572	NKX3-2.p2	BC094229|Ablim3|319713|actin binding LIM protein family, member 3	AK082380|Ablim3|319713|actin binding LIM protein family, member 3	BC060275|Ablim3|319713|actin binding LIM protein family, member 3	NM_198649|Ablim3|319713|actin binding LIM protein family, member 3
mm9_v1_chr16_+_4726348_4726451	0.0844642	NKX3-2.p2	NM_001136066|Hmox2|15369|heme oxygenase (decycling) 2	AK134536|Hmox2|15369|heme oxygenase (decycling) 2	BC002011|Hmox2|15369|heme oxygenase (decycling) 2	AK032175|Hmox2|15369|heme oxygenase (decycling) 2	AF054670|Hmox2|15369|heme oxygenase (decycling) 2	AK152936|Hmox2|15369|heme oxygenase (decycling) 2
mm9_v1_chr15_+_35301285_35301305	0.0843906	NKX3-2.p2	AK053274|Vps13b|666173|vacuolar protein sorting 13B (yeast)	NM_177151|Vps13b|666173|vacuolar protein sorting 13B (yeast)	AK049111|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr9_-_110019806_110019945	0.0841926	NKX3-2.p2	BC062885|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK153969|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK184646|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK159601|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK146326|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr4_-_117963950_117964031	0.0838004	NKX3-2.p2	NM_011213|Ptprf|19268|protein tyrosine phosphatase, receptor type, F
mm9_v1_chrX_+_91480268_91480342	0.0837944	NKX3-2.p2	AK081546|Klhl15|236904|kelch-like 15 (Drosophila)	NM_001039059|Klhl15|236904|kelch-like 15 (Drosophila)	NM_001039060|Klhl15|236904|kelch-like 15 (Drosophila)	NM_001039061|Klhl15|236904|kelch-like 15 (Drosophila)	NM_153165|Klhl15|236904|kelch-like 15 (Drosophila)	AK169500|Klhl15|236904|kelch-like 15 (Drosophila)	AK030432|Klhl15|236904|kelch-like 15 (Drosophila)	AK078112|Klhl15|236904|kelch-like 15 (Drosophila)	BC036978|Klhl15|236904|kelch-like 15 (Drosophila)
mm9_v1_chr5_-_72978788_72978788	0.0836941	NKX3-2.p2	AK084047|Gm5868|545758|predicted gene 5868	NM_001024147|Gm5868|545758|predicted gene 5868
mm9_v1_chr7_-_148379844_148379932	0.0836869	NKX3-2.p2	BC061885|Hras1|15461|Harvey rat sarcoma virus oncogene 1	BC050837|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_001130443|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_001130444|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_008284|Hras1|15461|Harvey rat sarcoma virus oncogene 1
mm9_v1_chr6_-_142519807_142519890	0.0835299	NKX3-2.p2	D88159|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8	AK156346|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8	NM_008428|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8	AK031777|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8
mm9_v1_chr3_+_114606995_114607339	0.0835048	NKX3-2.p2	AK049612|Olfm3|229759|olfactomedin 3	AK044605|Olfm3|229759|olfactomedin 3	AK045482|Olfm3|229759|olfactomedin 3	AK038569|Olfm3|229759|olfactomedin 3	AK079315|Olfm3|229759|olfactomedin 3	AK044325|Olfm3|229759|olfactomedin 3	AK137414|Olfm3|229759|olfactomedin 3	AF442825|Olfm3|229759|olfactomedin 3	NM_153458|Olfm3|229759|olfactomedin 3	BC112422|Olfm3|229759|olfactomedin 3	BC113129|Olfm3|229759|olfactomedin 3
mm9_v1_chr3_-_157699568_157699578	0.0833758	NKX3-2.p2	AK163152|Srsf11|69207|serine/arginine-rich splicing factor 11	AK040467|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr7_-_150926207_150926273	0.0827607	NKX3-2.p2	BC079872|Osbpl5|79196|oxysterol binding protein-like 5	AB074008|Osbpl5|79196|oxysterol binding protein-like 5
mm9_v1_chrX_-_34529689_34529693	0.0826286	NKX3-2.p2	NM_001177324|Sept6|56526|septin 6	NM_019942|Sept6|56526|septin 6
mm9_v1_chr4_-_122563299_122563313	0.0825584	NKX3-2.p2	AK154002|Cap1|12331|CAP, adenylate cyclase-associated protein 1 (yeast)
mm9_v1_chr6_+_40275473_40275514	0.0824409	NKX3-2.p2	NM_023538|Agk|69923|acylglycerol kinase	AK011715|Agk|69923|acylglycerol kinase	AK020107|Agk|69923|acylglycerol kinase	BC019145|Agk|69923|acylglycerol kinase	AJ401619|Agk|69923|acylglycerol kinase	AK089433|Agk|69923|acylglycerol kinase	BC093525|Agk|69923|acylglycerol kinase	AK155346|Agk|69923|acylglycerol kinase	AK076224|Agk|69923|acylglycerol kinase
mm9_v1_chr4_-_116300533_116300555	0.0824071	NKX3-2.p2	AK132690|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AK161367|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AF034610|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	NM_016777|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)
mm9_v1_chr1_+_63223689_63223722	0.0823952	NKX3-2.p2	BC039635|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK027911|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK168191|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	BC023139|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK012756|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	BC003899|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr17_+_24625782_24625829	0.0823598	NKX3-2.p2	BC138443|Caskin1|268932|CASK interacting protein 1	BC145281|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr17_+_33130067_33130141	0.0822569	NKX3-2.p2	AK050612|Zfp952|240067|zinc finger protein 952	BC057593|Zfp952|240067|zinc finger protein 952	NM_001045559|Zfp952|240067|zinc finger protein 952	BC051011|Zfp952|240067|zinc finger protein 952
mm9_v1_chr17_-_80689434_80689517	0.0818282	NKX3-2.p2	BC079618|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC066091|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC065169|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	AK042947|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr16_+_20548675_20548742	0.0817506	NKX3-2.p2	NM_013852|Abcf3|27406|ATP-binding cassette, sub-family F (GCN20), member 3	AK030626|Abcf3|27406|ATP-binding cassette, sub-family F (GCN20), member 3	BC032923|Abcf3|27406|ATP-binding cassette, sub-family F (GCN20), member 3
mm9_v1_chr5_+_144519150_144519171	0.0816839	NKX3-2.p2	AK040221|D130017N08Rik|320064|RIKEN cDNA D130017N08 gene
mm9_v1_chr2_+_68973856_68973946	0.0813964	NKX3-2.p2	NM_181547|Nostrin|329416|nitric oxide synthase trafficker	AK052926|Nostrin|329416|nitric oxide synthase trafficker	BC069942|Nostrin|329416|nitric oxide synthase trafficker	AY280963|Nostrin|329416|nitric oxide synthase trafficker	AJ564264|Nostrin|329416|nitric oxide synthase trafficker
mm9_v1_chr10_-_116585527_116585608	0.0811486	NKX3-2.p2	BC043109|Frs2|327826|fibroblast growth factor receptor substrate 2	NM_177798|Frs2|327826|fibroblast growth factor receptor substrate 2	AK028813|Frs2|327826|fibroblast growth factor receptor substrate 2	AK163442|Frs2|327826|fibroblast growth factor receptor substrate 2	BC055334|Frs2|327826|fibroblast growth factor receptor substrate 2	AK138144|Frs2|327826|fibroblast growth factor receptor substrate 2
mm9_v1_chr14_+_56159102_56159102	0.0808548	NKX3-2.p2	AK030501|Pck2|74551|phosphoenolpyruvate carboxykinase 2 (mitochondrial)	NM_028994|Pck2|74551|phosphoenolpyruvate carboxykinase 2 (mitochondrial)
mm9_v1_chr4_-_135609279_135609318	0.080824	NKX3-2.p2	AK011211|Rpl11|67025|ribosomal protein L11	AK011800|Rpl11|67025|ribosomal protein L11	AK169053|Rpl11|67025|ribosomal protein L11	AK002998|Rpl11|67025|ribosomal protein L11	AK008422|Rpl11|67025|ribosomal protein L11	AK013923|Rpl11|67025|ribosomal protein L11	AK014593|Rpl11|67025|ribosomal protein L11	AK153486|Rpl11|67025|ribosomal protein L11	AK164445|Rpl11|67025|ribosomal protein L11	NM_025919|Rpl11|67025|ribosomal protein L11	AK088967|Rpl11|67025|ribosomal protein L11
mm9_v1_chr3_-_104024291_104024328	0.0807989	NKX3-2.p2	AK018328|Magi3|99470|membrane associated guanylate kinase, WW and PDZ domain containing 3	NM_001159354|Magi3|99470|membrane associated guanylate kinase, WW and PDZ domain containing 3	NM_133853|Magi3|99470|membrane associated guanylate kinase, WW and PDZ domain containing 3
mm9_v1_chr9_+_47970096_47970197	0.0806175	NKX3-2.p2	AK021362|Fam55d|244853|family with sequence similarity 55, member D	AK048132|Fam55d|244853|family with sequence similarity 55, member D	BC094249|Fam55d|244853|family with sequence similarity 55, member D	NM_172921|Fam55d|244853|family with sequence similarity 55, member D
mm9_v1_chr5_+_93112640_93112650	0.0802865	NKX3-2.p2	BC145113|Shroom3|27428|shroom family member 3
mm9_v1_chr8_-_41596638_41596711	0.0801914	NKX3-2.p2	AK044535|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	NM_011135|Cnot7|18983|CCR4-NOT transcription complex, subunit 7
mm9_v1_chr6_-_124691022_124691109	0.0801468	NKX3-2.p2	AK009591|Grcc10|14790|gene rich cluster, C10 gene	BC005683|Grcc10|14790|gene rich cluster, C10 gene	AK013899|Grcc10|14790|gene rich cluster, C10 gene	NM_013535|Grcc10|14790|gene rich cluster, C10 gene
mm9_v1_chr4_-_151235861_151235879	0.0800944	NKX3-2.p2	AK158710|Camta1|100072|calmodulin binding transcription activator 1	NM_001081557|Camta1|100072|calmodulin binding transcription activator 1	NM_001195565|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr2_-_34610751_34610751	0.0799416	NKX3-2.p2	BC060123|Gapvd1|66691|GTPase activating protein and VPS9 domains 1	NM_025709|Gapvd1|66691|GTPase activating protein and VPS9 domains 1
mm9_v1_chr18_+_61714969_61714972	0.0797784	NKX3-2.p2	AK152793|Csnk1a1|93687|casein kinase 1, alpha 1	AK166318|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr14_-_32308152_32308237	0.0797585	NKX3-2.p2	BC030449|Mettl6|67011|methyltransferase like 6	NM_025907|Mettl6|67011|methyltransferase like 6	AK133735|Mettl6|67011|methyltransferase like 6	AK006715|Mettl6|67011|methyltransferase like 6	AK005448|Mettl6|67011|methyltransferase like 6	AK078185|Mettl6|67011|methyltransferase like 6	AK082949|Mettl6|67011|methyltransferase like 6
mm9_v1_chr13_+_68736315_68736329	0.0797212	NKX3-2.p2	AK005609|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	AK138387|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	NM_027035|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	BC049693|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	BC119515|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	BC119516|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene
mm9_v1_chr3_-_82351881_82352006	0.0795622	NKX3-2.p2	BC104490|Npy2r|18167|neuropeptide Y receptor Y2	BC104733|Npy2r|18167|neuropeptide Y receptor Y2	BC104734|Npy2r|18167|neuropeptide Y receptor Y2	AK018543|Npy2r|18167|neuropeptide Y receptor Y2	AK049892|Npy2r|18167|neuropeptide Y receptor Y2	D86238|Npy2r|18167|neuropeptide Y receptor Y2	NM_008731|Npy2r|18167|neuropeptide Y receptor Y2
mm9_v1_chrX_+_97710893_97711108	0.0795549	NKX3-2.p2	AK218313|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	AK210875|Igbp1|18518|immunoglobulin (CD79A) binding protein 1
mm9_v1_chr16_+_22892125_22892139	0.079508	NKX3-2.p2	BC012678|Ahsg|11625|alpha-2-HS-glycoprotein	S96534|Ahsg|11625|alpha-2-HS-glycoprotein
mm9_v1_chr6_-_124662063_124662115	0.0792759	NKX3-2.p2	BC002004|Emg1|14791|EMG1 nucleolar protein homolog (S. cerevisiae)
mm9_v1_chr7_+_137789817_137789916	0.0787945	NKX3-2.p2	AK198910|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr4_-_138748586_138748605	0.0787473	NKX3-2.p2	AK020648|9530077C14Rik|78454|RIKEN cDNA 9530077C14 gene
mm9_v1_chr19_+_29326204_29326359	0.0785788	NKX3-2.p2	NM_001048177|Jak2|16452|Janus kinase 2	NM_008413|Jak2|16452|Janus kinase 2	AK087255|Jak2|16452|Janus kinase 2
mm9_v1_chr7_+_4874178_4874216	0.0783853	NKX3-2.p2	AK078272|Nat14|269854|N-acetyltransferase 14	BC047219|Nat14|269854|N-acetyltransferase 14
mm9_v1_chr5_-_137510950_137511054	0.0783534	NKX3-2.p2	AK192071|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr7_+_57230683_57230719	0.0781945	NKX3-2.p2	AY622226|Nell1|338352|NEL-like 1 (chicken)	NM_001037906|Nell1|338352|NEL-like 1 (chicken)
mm9_v1_chr7_-_112788821_112788929	0.0781437	NKX3-2.p2	BC028310|Arfip2|76932|ADP-ribosylation factor interacting protein 2	BC013794|Arfip2|76932|ADP-ribosylation factor interacting protein 2	BC022942|Arfip2|76932|ADP-ribosylation factor interacting protein 2	AK009100|Arfip2|76932|ADP-ribosylation factor interacting protein 2	AK154772|Arfip2|76932|ADP-ribosylation factor interacting protein 2	NM_029802|Arfip2|76932|ADP-ribosylation factor interacting protein 2
mm9_v1_chr5_-_124199380_124199422	0.0780687	NKX3-2.p2	BC008229|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK012697|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK077854|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK166941|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK168476|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK017771|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005523|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005525|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_025438|Rsrc2|208606|arginine/serine-rich coiled-coil 2
mm9_v1_chr8_+_114535258_114535298	0.0780602	NKX3-2.p2	NM_020584|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK161452|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	BC017641|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK148537|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK148508|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein
mm9_v1_chr10_-_39971060_39971064	0.0780523	NKX3-2.p2	AK185766|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha
mm9_v1_chr3_-_87689483_87689550	0.0780519	NKX3-2.p2	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr18_+_36919868_36919931	0.0777086	NKX3-2.p2	AK146093|Wdr55|67936|WD repeat domain 55	AK075958|Wdr55|67936|WD repeat domain 55	NM_026464|Wdr55|67936|WD repeat domain 55	BC131932|Wdr55|67936|WD repeat domain 55	BC131934|Wdr55|67936|WD repeat domain 55	AK018469|Wdr55|67936|WD repeat domain 55	AK017695|Wdr55|67936|WD repeat domain 55	BC064750|Wdr55|67936|WD repeat domain 55
mm9_v1_chr4_+_83171448_83171542	0.0777017	NKX3-2.p2	NM_001081012|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK170886|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK015166|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK029637|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK015563|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK041005|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	BC023323|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	BC172165|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene
mm9_v1_chr5_-_114221640_114221677	0.0776823	NKX3-2.p2	BC036350|Sart3|53890|squamous cell carcinoma antigen recognized by T-cells 3	BC057156|Sart3|53890|squamous cell carcinoma antigen recognized by T-cells 3	AF172722|Sart3|53890|squamous cell carcinoma antigen recognized by T-cells 3	AK086398|Sart3|53890|squamous cell carcinoma antigen recognized by T-cells 3	NM_016926|Sart3|53890|squamous cell carcinoma antigen recognized by T-cells 3	AK053828|Sart3|53890|squamous cell carcinoma antigen recognized by T-cells 3
mm9_v1_chr13_-_10360048_10360092	0.0776288	NKX3-2.p2	AK080950|Chrm3|12671|cholinergic receptor, muscarinic 3, cardiac	NM_033269|Chrm3|12671|cholinergic receptor, muscarinic 3, cardiac	AK051841|Chrm3|12671|cholinergic receptor, muscarinic 3, cardiac
mm9_v1_chr5_+_25005506_25005758	0.0775897	NKX3-2.p2	AK149324|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene	AK029244|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene
mm9_v1_chrX_+_90920450_90920749	0.0775644	NKX3-2.p2	NM_211138|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	BC048917|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189949|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK032027|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chr12_+_77425836_77425924	0.0774672	NKX3-2.p2	AK139319|Akap5|238276|A kinase (PRKA) anchor protein 5	NM_001101471|Akap5|238276|A kinase (PRKA) anchor protein 5
mm9_v1_chr3_-_119486136_119486235	0.0773124	NKX3-2.p2	AK207246|Ptbp2|56195|polypyrimidine tract binding protein 2	AF095718|Ptbp2|56195|polypyrimidine tract binding protein 2	BC010255|Ptbp2|56195|polypyrimidine tract binding protein 2	AK137348|Ptbp2|56195|polypyrimidine tract binding protein 2	AK050624|Ptbp2|56195|polypyrimidine tract binding protein 2	AK050650|Ptbp2|56195|polypyrimidine tract binding protein 2	AK041655|Ptbp2|56195|polypyrimidine tract binding protein 2	AK015056|Ptbp2|56195|polypyrimidine tract binding protein 2
mm9_v1_chr15_-_77759356_77759437	0.0771919	NKX3-2.p2	AK167925|Txn2|56551|thioredoxin 2	U85089|Txn2|56551|thioredoxin 2	AK167754|Txn2|56551|thioredoxin 2	AK168322|Txn2|56551|thioredoxin 2	AK002358|Txn2|56551|thioredoxin 2	AK147164|Txn2|56551|thioredoxin 2	AK090199|Txn2|56551|thioredoxin 2	AK149855|Txn2|56551|thioredoxin 2	BC068182|Txn2|56551|thioredoxin 2	AK010917|Txn2|56551|thioredoxin 2	NM_019913|Txn2|56551|thioredoxin 2	AK160591|Txn2|56551|thioredoxin 2
mm9_v1_chr4_+_134052918_134052925	0.0771896	NKX3-2.p2	AK078685|Paqr7|71904|progestin and adipoQ receptor family member VII	AK161542|Paqr7|71904|progestin and adipoQ receptor family member VII	AF313618|Paqr7|71904|progestin and adipoQ receptor family member VII
mm9_v1_chr2_+_164630599_164630613	0.0771737	NKX3-2.p2	AK014904|Zswim3|67538|zinc finger, SWIM domain containing 3	BC023287|Zswim3|67538|zinc finger, SWIM domain containing 3	NM_178375|Zswim3|67538|zinc finger, SWIM domain containing 3
mm9_v1_chr2_-_91489909_91489949	0.0771242	NKX3-2.p2	AK132515|Zfp408|381410|zinc finger protein 408	NM_001033451|Zfp408|381410|zinc finger protein 408
mm9_v1_chr5_-_147396407_147396450	0.0769611	NKX3-2.p2	D21061|Gpr12|14738|G-protein coupled receptor 12
mm9_v1_chr17_+_35272688_35272836	0.0769597	NKX3-2.p2	AK164266|Bag6|224727|BCL2-associated athanogene 6	AK170134|Bag6|224727|BCL2-associated athanogene 6
mm9_v1_chr6_-_124779408_124779497	0.0769129	NKX3-2.p2	AK186740|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)	BC066993|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)	AK154008|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)	NM_013700|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)
mm9_v1_chr10_+_94977721_94977835	0.0768594	NKX3-2.p2	AK005302|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AK161968|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AK005788|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC067069|Ube2n|93765|ubiquitin-conjugating enzyme E2N	NM_080560|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AY039837|Ube2n|93765|ubiquitin-conjugating enzyme E2N	Y09873|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC034898|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC052203|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC132630|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC138211|Ube2n|93765|ubiquitin-conjugating enzyme E2N
mm9_v1_chr13_+_55802874_55802961	0.0768496	NKX3-2.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr10_+_86984670_86984685	0.0767901	NKX3-2.p2	AK149519|Pah|18478|phenylalanine hydroxylase	AK145839|Pah|18478|phenylalanine hydroxylase	BC013458|Pah|18478|phenylalanine hydroxylase
mm9_v1_chr9_-_109733967_109734002	0.0763155	NKX3-2.p2	BC024703|3000002C10Rik|378954|glyceraldehyde-3-phosphate dehydrogenase pseudogene
mm9_v1_chr11_+_121121273_121121393	0.0762457	NKX3-2.p2	EU882160|Foxk2|68837|forkhead box K2	NM_001080932|Foxk2|68837|forkhead box K2	AK139325|Foxk2|68837|forkhead box K2
mm9_v1_chr11_-_98636538_98636646	0.0762368	NKX3-2.p2	AK041047|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK135640|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	X86010|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK137582|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	NM_145434|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK137398|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK146430|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1
mm9_v1_chr7_-_25757587_25757746	0.0761542	NKX3-2.p2	L40934|Rabac1|14470|Rab acceptor 1 (prenylated)	AK009726|Rabac1|14470|Rab acceptor 1 (prenylated)	AK150681|Rabac1|14470|Rab acceptor 1 (prenylated)	AK008559|Rabac1|14470|Rab acceptor 1 (prenylated)	AF252856|Rabac1|14470|Rab acceptor 1 (prenylated)	AF120162|Rabac1|14470|Rab acceptor 1 (prenylated)	BC008242|Rabac1|14470|Rab acceptor 1 (prenylated)	AK170289|Rabac1|14470|Rab acceptor 1 (prenylated)	NM_010261|Rabac1|14470|Rab acceptor 1 (prenylated)
mm9_v1_chr11_-_98636689_98636697	0.0760242	NKX3-2.p2	AK154931|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK155597|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1
mm9_v1_chr11_+_22412271_22412295	0.0760031	NKX3-2.p2	NM_153596|Tmem17|103765|transmembrane protein 17	BC030386|Tmem17|103765|transmembrane protein 17
mm9_v1_chr1_+_61685397_61685574	0.075924	NKX3-2.p2	AK013352|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	NM_001081050|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK051398|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK031487|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK141451|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK008055|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)
mm9_v1_chr6_-_137118197_137118219	0.0758472	NKX3-2.p2	AK028025|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	AK133734|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chrX_+_150266835_150266835	0.075839	NKX3-2.p2	BC068162|Spin2|278240|spindlin family, member 2	NM_001005370|Spin2|278240|spindlin family, member 2
mm9_v1_chr9_-_78226334_78226394	0.0758169	NKX3-2.p2	AB283026|Ooep|67968|oocyte expressed protein homolog (dog)	BC062245|Ooep|67968|oocyte expressed protein homolog (dog)	AK133554|Ooep|67968|oocyte expressed protein homolog (dog)	AK135950|Ooep|67968|oocyte expressed protein homolog (dog)	AK136199|Ooep|67968|oocyte expressed protein homolog (dog)	AK145510|Ooep|67968|oocyte expressed protein homolog (dog)	AK010266|Ooep|67968|oocyte expressed protein homolog (dog)	AK010809|Ooep|67968|oocyte expressed protein homolog (dog)	DQ238107|Ooep|67968|oocyte expressed protein homolog (dog)	NM_026480|Ooep|67968|oocyte expressed protein homolog (dog)
mm9_v1_chr4_-_43013064_43013178	0.0757422	NKX3-2.p2	
mm9_v1_chr2_-_165151935_165152001	0.0755935	NKX3-2.p2	AK047040|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK050823|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK053574|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK032033|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	BC023954|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK038097|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK045428|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	AK129023|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	NM_080287|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)	NM_207706|Elmo2|140579|engulfment and cell motility 2, ced-12 homolog (C. elegans)
mm9_v1_chr11_+_100277007_100277076	0.0755581	NKX3-2.p2	NM_001163481|Fkbp10|14230|FK506 binding protein 10	NM_010221|Fkbp10|14230|FK506 binding protein 10	L07063|Fkbp10|14230|FK506 binding protein 10	AK144185|Fkbp10|14230|FK506 binding protein 10	BC029546|Fkbp10|14230|FK506 binding protein 10	AK019446|Fkbp10|14230|FK506 binding protein 10
mm9_v1_chr15_-_37722161_37722182	0.0754811	NKX3-2.p2	AK048440|Ncald|52589|neurocalcin delta	NM_134094|Ncald|52589|neurocalcin delta
mm9_v1_chr12_-_85262786_85262867	0.0754439	NKX3-2.p2	AK004553|Numb|18222|numb gene homolog (Drosophila)	BC050108|Numb|18222|numb gene homolog (Drosophila)	BC033459|Numb|18222|numb gene homolog (Drosophila)
mm9_v1_chr5_+_144984574_144984593	0.0751505	NKX3-2.p2	
mm9_v1_chr17_-_24664876_24664899	0.0749721	NKX3-2.p2	NM_001172113|Traf7|224619|TNF receptor-associated factor 7	NM_001172114|Traf7|224619|TNF receptor-associated factor 7	NM_153792|Traf7|224619|TNF receptor-associated factor 7
mm9_v1_chr2_-_154429414_154429464	0.0748983	NKX3-2.p2	AK003127|Pxmp4|59038|peroxisomal membrane protein 4	AK019381|Pxmp4|59038|peroxisomal membrane protein 4	AK013793|Pxmp4|59038|peroxisomal membrane protein 4
mm9_v1_chr9_-_69608633_69608746	0.074831	NKX3-2.p2	X92592|Foxb1|64290|forkhead box B1	U04198|Foxb1|64290|forkhead box B1	U90538|Foxb1|64290|forkhead box B1	NM_022378|Foxb1|64290|forkhead box B1
mm9_v1_chr12_+_89598984_89599091	0.0748227	NKX3-2.p2	AK011310|Adck1|72113|aarF domain containing kinase 1	AK154839|Adck1|72113|aarF domain containing kinase 1
mm9_v1_chr17_+_64950038_64950114	0.0747358	NKX3-2.p2	AK144763|Man2a1|17158|mannosidase 2, alpha 1
mm9_v1_chr7_-_20214596_20214811	0.0746454	NKX3-2.p2	DQ020178|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	DQ020179|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	DQ020180|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	DQ020181|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	BC034523|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	M83380|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	BC117793|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	AK156767|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	AK146932|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	BC019765|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	NM_009046|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B
mm9_v1_chr11_-_69694379_69694486	0.0744712	NKX3-2.p2	AK170258|Kctd11|216858|potassium channel tetramerisation domain containing 11	BC052734|Kctd11|216858|potassium channel tetramerisation domain containing 11	BC063052|Kctd11|216858|potassium channel tetramerisation domain containing 11	AF465352|Kctd11|216858|potassium channel tetramerisation domain containing 11	AK161602|Kctd11|216858|potassium channel tetramerisation domain containing 11	NM_153143|Kctd11|216858|potassium channel tetramerisation domain containing 11
mm9_v1_chr5_+_54200903_54200980	0.0743976	NKX3-2.p2	BC020138|Tbc1d19|67249|TBC1 domain family, member 19	AK012836|Tbc1d19|67249|TBC1 domain family, member 19	AK076128|Tbc1d19|67249|TBC1 domain family, member 19	AK177065|Tbc1d19|67249|TBC1 domain family, member 19
mm9_v1_chr4_+_65274679_65274844	0.074352	NKX3-2.p2	
mm9_v1_chr7_-_35015297_35015308	0.0742907	NKX3-2.p2	BC086640|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr10_+_86984705_86984718	0.0742317	NKX3-2.p2	X51942|Pah|18478|phenylalanine hydroxylase
mm9_v1_chr12_+_30219769_30219800	0.0740559	NKX3-2.p2	AK036205|Myt1l|17933|myelin transcription factor 1-like	NM_001093776|Myt1l|17933|myelin transcription factor 1-like	BC079651|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chrX_-_103415034_103415180	0.0739413	NKX3-2.p2	AK135097|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001001176|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr9_-_105297572_105297616	0.0736059	NKX3-2.p2	AK030042|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11	AK054237|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11	AK030186|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11	NM_172461|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11
mm9_v1_chr4_-_141430740_141430891	0.0734306	NKX3-2.p2	AK150207|Efhd2|27984|EF hand domain containing 2	AK007560|Efhd2|27984|EF hand domain containing 2	AK011219|Efhd2|27984|EF hand domain containing 2	AK159367|Efhd2|27984|EF hand domain containing 2	AK169409|Efhd2|27984|EF hand domain containing 2	AK167267|Efhd2|27984|EF hand domain containing 2	AK048475|Efhd2|27984|EF hand domain containing 2	NM_025994|Efhd2|27984|EF hand domain containing 2	BC125303|Efhd2|27984|EF hand domain containing 2
mm9_v1_chr11_+_105042843_105042862	0.0733364	NKX3-2.p2	AK165667|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)	NM_001112705|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)	NM_011903|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)
mm9_v1_chr18_-_77286034_77286037	0.0733015	NKX3-2.p2	AK017114|Katnal2|71206|katanin p60 subunit A-like 2	NM_027721|Katnal2|71206|katanin p60 subunit A-like 2	AK083612|Katnal2|71206|katanin p60 subunit A-like 2
mm9_v1_chr4_+_114672849_114672868	0.0732239	NKX3-2.p2	BC141175|Stil|20460|Scl/Tal1 interrupting locus	BC145493|Stil|20460|Scl/Tal1 interrupting locus
mm9_v1_chr4_+_110070336_110070438	0.0732131	NKX3-2.p2	AK016502|Agbl4|78933|ATP/GTP binding protein-like 4	AK019817|Agbl4|78933|ATP/GTP binding protein-like 4	AK051109|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867039|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867040|Agbl4|78933|ATP/GTP binding protein-like 4	NM_001048189|Agbl4|78933|ATP/GTP binding protein-like 4	NM_030231|Agbl4|78933|ATP/GTP binding protein-like 4
mm9_v1_chr2_-_148269170_148269322	0.0731377	NKX3-2.p2	AK155060|Cd93|17064|CD93 antigen	AK079060|Cd93|17064|CD93 antigen	NM_010740|Cd93|17064|CD93 antigen	AF081789|Cd93|17064|CD93 antigen	AK028485|Cd93|17064|CD93 antigen
mm9_v1_chr16_+_21204820_21205008	0.0730603	NKX3-2.p2	AK144414|Ephb3|13845|Eph receptor B3	BC014822|Ephb3|13845|Eph receptor B3	BC053085|Ephb3|13845|Eph receptor B3	NM_010143|Ephb3|13845|Eph receptor B3	Z49086|Ephb3|13845|Eph receptor B3
mm9_v1_chr3_-_126865259_126865312	0.0727569	NKX3-2.p2	AK083111|Ank2|109676|ankyrin 2, brain
mm9_v1_chr19_+_16207728_16207780	0.072749	NKX3-2.p2	M55412|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide
mm9_v1_chr6_+_134932018_134932018	0.0727151	NKX3-2.p2	NM_001109914|Apold1|381823|apolipoprotein L domain containing 1
mm9_v1_chr5_-_123064483_123064536	0.0726962	NKX3-2.p2	BC055721|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK161375|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK013424|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AF354757|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	NM_009879|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	Y10495|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)
mm9_v1_chr14_-_34260308_34260313	0.0726363	NKX3-2.p2	BC053027|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr7_+_108966826_108966826	0.0723245	NKX3-2.p2	NM_008887|Phox2a|11859|paired-like homeobox 2a
mm9_v1_chr12_+_88607621_88607770	0.0722937	NKX3-2.p2	AK165289|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	AK076069|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	AK077903|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	BC025552|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	NM_146036|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	AK166644|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)	BC023857|Ahsa1|217737|AHA1, activator of heat shock protein ATPase homolog 1 (yeast)
mm9_v1_chr6_+_11875912_11875926	0.0722366	NKX3-2.p2	BC040236|Phf14|75725|PHD finger protein 14
mm9_v1_chr14_-_30534966_30535111	0.0719769	NKX3-2.p2	AJ010949|Cacna2d3|12294|calcium channel, voltage-dependent, alpha2/delta subunit 3	NM_009785|Cacna2d3|12294|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm9_v1_chr2_+_49474775_49474833	0.0719247	NKX3-2.p2	BC067051|Kif5c|16574|kinesin family member 5C	NM_008449|Kif5c|16574|kinesin family member 5C
mm9_v1_chr7_-_112781902_112782053	0.0717975	NKX3-2.p2	BC003347|Trim3|55992|tripartite motif-containing 3	AF220019|Trim3|55992|tripartite motif-containing 3	AK144674|Trim3|55992|tripartite motif-containing 3	NM_018880|Trim3|55992|tripartite motif-containing 3	AK170029|Trim3|55992|tripartite motif-containing 3	BC034263|Trim3|55992|tripartite motif-containing 3	AK019165|Trim3|55992|tripartite motif-containing 3
mm9_v1_chr1_+_92811676_92811782	0.0717844	NKX3-2.p2	NM_053015|Mlph|171531|melanophilin	AF384098|Mlph|171531|melanophilin	BC006900|Mlph|171531|melanophilin	AK008973|Mlph|171531|melanophilin	AK019883|Mlph|171531|melanophilin	AK148274|Mlph|171531|melanophilin	BC150804|Mlph|171531|melanophilin
mm9_v1_chr3_-_157699372_157699549	0.0715218	NKX3-2.p2	BC037053|Srsf11|69207|serine/arginine-rich splicing factor 11	BC083359|Srsf11|69207|serine/arginine-rich splicing factor 11	AK011472|Srsf11|69207|serine/arginine-rich splicing factor 11	BC055763|Srsf11|69207|serine/arginine-rich splicing factor 11	BC038928|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr13_-_29043617_29043693	0.0714784	NKX3-2.p2	AK051540|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr15_-_74539748_74539751	0.0714684	NKX3-2.p2	AK168885|Jrk|16469|jerky	NM_008415|Jrk|16469|jerky
mm9_v1_chr16_-_38713106_38713149	0.0714552	NKX3-2.p2	NM_020260|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr10_-_105011265_105011266	0.071327	NKX3-2.p2	BC138362|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	BC138363|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chr14_+_76510684_76510739	0.0712618	NKX3-2.p2	AK032324|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	NM_013745|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	AK156205|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	AK009260|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	BC020364|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	BC056192|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	AF159549|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1
mm9_v1_chr1_+_171859069_171859069	0.0711382	NKX3-2.p2	AK141447|1700084C01Rik|78465|RIKEN cDNA 1700084C01 gene	NM_001033185|1700084C01Rik|78465|RIKEN cDNA 1700084C01 gene
mm9_v1_chr16_-_20716198_20716246	0.0710204	NKX3-2.p2	AK165000|Clcn2|12724|chloride channel 2
mm9_v1_chr14_-_52899101_52899219	0.0709019	NKX3-2.p2	AK160249|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr19_-_57389256_57389302	0.0708823	NKX3-2.p2	AK029371|Ablim1|226251|actin-binding LIM protein 1
mm9_v1_chr4_-_3501912_3501958	0.0707701	NKX3-2.p2	AK048210|Tmem68|72098|transmembrane protein 68	NM_028097|Tmem68|72098|transmembrane protein 68	BC016240|Tmem68|72098|transmembrane protein 68	AK008493|Tmem68|72098|transmembrane protein 68	AK084881|Tmem68|72098|transmembrane protein 68	AK147765|Tmem68|72098|transmembrane protein 68	AK162563|Tmem68|72098|transmembrane protein 68	AK088600|Tmem68|72098|transmembrane protein 68
mm9_v1_chr3_+_120994646_120994734	0.0707064	NKX3-2.p2	AK011733|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)	BC002278|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)	NM_024178|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)
mm9_v1_chr2_-_166888514_166888514	0.0706734	NKX3-2.p2	AK147564|Znfx1|98999|zinc finger, NFX1-type containing 1	AK147652|Znfx1|98999|zinc finger, NFX1-type containing 1	NM_001033196|Znfx1|98999|zinc finger, NFX1-type containing 1
mm9_v1_chr3_-_108248113_108248159	0.070537	NKX3-2.p2	AK028154|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK153158|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK152150|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr2_+_26766310_26766326	0.0704584	NKX3-2.p2	AK160622|Rpl7a|27176|ribosomal protein L7A	AK135447|Rpl7a|27176|ribosomal protein L7A	BC089624|Rpl7a|27176|ribosomal protein L7A	AK160044|Rpl7a|27176|ribosomal protein L7A	AK160621|Rpl7a|27176|ribosomal protein L7A	AK019449|Rpl7a|27176|ribosomal protein L7A	NM_013721|Rpl7a|27176|ribosomal protein L7A
mm9_v1_chr6_+_112996302_112996320	0.0703597	NKX3-2.p2	AK142140|Thumpd3|14911|THUMP domain containing 3	AK017246|Thumpd3|14911|THUMP domain containing 3	BC002024|Thumpd3|14911|THUMP domain containing 3	BC046800|Thumpd3|14911|THUMP domain containing 3	NM_008188|Thumpd3|14911|THUMP domain containing 3
mm9_v1_chr7_+_30955159_30955213	0.0703358	NKX3-2.p2	AK142560|Gm5113|330503|predicted gene 5113
mm9_v1_chr1_+_60466620_60466646	0.0703029	NKX3-2.p2	AK081803|Abi2|329165|abl-interactor 2	BC056345|Abi2|329165|abl-interactor 2
mm9_v1_chr15_-_103070227_103070257	0.0702751	NKX3-2.p2	BC004707|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001076789|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr7_-_20189709_20189838	0.0702522	NKX3-2.p2	AF042799|Clasrp|53609|CLK4-associating serine/arginine rich protein	AK009334|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC010728|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC079543|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC103781|Clasrp|53609|CLK4-associating serine/arginine rich protein	AK159443|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC106129|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC060092|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC051916|Clasrp|53609|CLK4-associating serine/arginine rich protein	NM_016680|Clasrp|53609|CLK4-associating serine/arginine rich protein
mm9_v1_chr2_-_33743000_33743034	0.0699671	NKX3-2.p2	AK011854|Fam125b|72543|family with sequence similarity 125, member B
mm9_v1_chr17_+_75117077_75117107	0.069922	NKX3-2.p2	AK030942|Ttc27|74196|tetratricopeptide repeat domain 27	AK049324|Ttc27|74196|tetratricopeptide repeat domain 27	NM_152817|Ttc27|74196|tetratricopeptide repeat domain 27	AK012131|Ttc27|74196|tetratricopeptide repeat domain 27	AK168138|Ttc27|74196|tetratricopeptide repeat domain 27
mm9_v1_chr1_+_21230683_21230717	0.0698135	NKX3-2.p2	AK014076|Gsta3|14859|glutathione S-transferase, alpha 3	AK149543|Gsta3|14859|glutathione S-transferase, alpha 3
mm9_v1_chr4_-_57156103_57156256	0.0697438	NKX3-2.p2	BC113123|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr8_-_60131768_60131885	0.0697322	NKX3-2.p2	AF349573|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK030683|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK033427|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK036523|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	BC052461|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK041791|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	NM_001167981|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	NM_144731|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
mm9_v1_chr1_+_36569141_36569293	0.0697151	NKX3-2.p2	BC080275|Cnnm3|94218|cyclin M3
mm9_v1_chr13_+_46597461_46597559	0.0696579	NKX3-2.p2	AK049813|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	BC050752|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK013331|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK033071|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK010235|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr18_+_61714974_61715001	0.0695363	NKX3-2.p2	AK076264|Csnk1a1|93687|casein kinase 1, alpha 1	AK141421|Csnk1a1|93687|casein kinase 1, alpha 1	AK078398|Csnk1a1|93687|casein kinase 1, alpha 1	AK019176|Csnk1a1|93687|casein kinase 1, alpha 1	AK019411|Csnk1a1|93687|casein kinase 1, alpha 1	AK166429|Csnk1a1|93687|casein kinase 1, alpha 1	AK147165|Csnk1a1|93687|casein kinase 1, alpha 1	AK152387|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr6_+_123073408_123073506	0.0694984	NKX3-2.p2	AK049002|Clec4a2|26888|C-type lectin domain family 4, member a2	BC006623|Clec4a2|26888|C-type lectin domain family 4, member a2	BC075729|Clec4a2|26888|C-type lectin domain family 4, member a2
mm9_v1_chr6_+_86799460_86799754	0.0693701	NKX3-2.p2	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr2_+_145686480_145686484	0.0693137	NKX3-2.p2	AK171064|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr5_+_148000271_148000302	0.0691941	NKX3-2.p2	NM_008178|Gsx1|14842|GS homeobox 1	U21224|Gsx1|14842|GS homeobox 1	BC137769|Gsx1|14842|GS homeobox 1
mm9_v1_chr1_-_94538517_94538563	0.0690266	NKX3-2.p2	AK152318|Myeov2|66915|myeloma overexpressed 2	AK012198|Myeov2|66915|myeloma overexpressed 2	AK003315|Myeov2|66915|myeloma overexpressed 2	BC147334|Myeov2|66915|myeloma overexpressed 2	BC147335|Myeov2|66915|myeloma overexpressed 2	BC147659|Myeov2|66915|myeloma overexpressed 2	BC147669|Myeov2|66915|myeloma overexpressed 2	BC049759|Myeov2|66915|myeloma overexpressed 2	NM_001163425|Myeov2|66915|myeloma overexpressed 2
mm9_v1_chr2_-_102241003_102241049	0.0688897	NKX3-2.p2	AJ249129|Trim44|80985|tripartite motif-containing 44	BC098369|Trim44|80985|tripartite motif-containing 44
mm9_v1_chr18_+_65048630_65048682	0.0685495	NKX3-2.p2	AK042621|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr6_-_35489703_35489856	0.0684421	NKX3-2.p2	AK151106|Mtpn|14489|myotrophin	AK151147|Mtpn|14489|myotrophin	AK151564|Mtpn|14489|myotrophin	AK152317|Mtpn|14489|myotrophin	AK151687|Mtpn|14489|myotrophin	AK152272|Mtpn|14489|myotrophin	BC043084|Mtpn|14489|myotrophin	AK049398|Mtpn|14489|myotrophin	AK146473|Mtpn|14489|myotrophin	AK145755|Mtpn|14489|myotrophin	D78188|Mtpn|14489|myotrophin	AK002620|Mtpn|14489|myotrophin	AK083888|Mtpn|14489|myotrophin	BC054811|Mtpn|14489|myotrophin	AK150750|Mtpn|14489|myotrophin	AK132029|Mtpn|14489|myotrophin	AK151640|Mtpn|14489|myotrophin	AK151485|Mtpn|14489|myotrophin	AK028027|Mtpn|14489|myotrophin	U20290|Mtpn|14489|myotrophin	AK146305|Mtpn|14489|myotrophin
mm9_v1_chr11_-_89163840_89163872	0.0683923	NKX3-2.p2	AK146488|Nog|18121|noggin	NM_008711|Nog|18121|noggin
mm9_v1_chrX_-_149471740_149472145	0.0683842	NKX3-2.p2	AK008349|Mageh1|75625|melanoma antigen, family H, 1	AF319981|Mageh1|75625|melanoma antigen, family H, 1	BC058380|Mageh1|75625|melanoma antigen, family H, 1	BC051935|Mageh1|75625|melanoma antigen, family H, 1	BC060080|Mageh1|75625|melanoma antigen, family H, 1	AK145866|Mageh1|75625|melanoma antigen, family H, 1	NM_023788|Mageh1|75625|melanoma antigen, family H, 1	AK000896|Mageh1|75625|melanoma antigen, family H, 1
mm9_v1_chr1_+_120285920_120286055	0.0683353	NKX3-2.p2	AK080782|Clasp1|76707|CLIP associating protein 1	BC157938|Clasp1|76707|CLIP associating protein 1	BC158064|Clasp1|76707|CLIP associating protein 1	AJ276962|Clasp1|76707|CLIP associating protein 1	AK031181|Clasp1|76707|CLIP associating protein 1
mm9_v1_chr18_-_33623668_33623692	0.0683216	NKX3-2.p2	NM_001109988|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr18_-_33623527_33623549	0.068286	NKX3-2.p2	AK020629|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr16_+_92086695_92086827	0.0680783	NKX3-2.p2	AK133105|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3
mm9_v1_chr12_+_81745254_81745279	0.0678807	NKX3-2.p2	BC043112|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chrX_-_96665980_96666083	0.0676085	NKX3-2.p2	AK005373|Pja1|18744|praja1, RING-H2 motif containing	BC037616|Pja1|18744|praja1, RING-H2 motif containing	AK181060|Pja1|18744|praja1, RING-H2 motif containing	AK181628|Pja1|18744|praja1, RING-H2 motif containing	AK188149|Pja1|18744|praja1, RING-H2 motif containing	BC025975|Pja1|18744|praja1, RING-H2 motif containing	AK145943|Pja1|18744|praja1, RING-H2 motif containing	AF335250|Pja1|18744|praja1, RING-H2 motif containing	AF335251|Pja1|18744|praja1, RING-H2 motif containing	AF335252|Pja1|18744|praja1, RING-H2 motif containing	AK135382|Pja1|18744|praja1, RING-H2 motif containing	NM_001083110|Pja1|18744|praja1, RING-H2 motif containing	NM_008853|Pja1|18744|praja1, RING-H2 motif containing
mm9_v1_chr7_-_20408063_20408067	0.0675712	NKX3-2.p2	AF067774|Bcl3|12051|B-cell leukemia/lymphoma 3	AK155016|Bcl3|12051|B-cell leukemia/lymphoma 3
mm9_v1_chr4_-_128798939_128798983	0.0674787	NKX3-2.p2	NM_001130419|Hpca|15444|hippocalcin
mm9_v1_chr3_-_88636411_88636470	0.0673784	NKX3-2.p2	AK141588|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK014401|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK033977|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK078122|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene
mm9_v1_chr5_+_125956221_125956249	0.0673639	NKX3-2.p2	AK019063|Aacs|78894|acetoacetyl-CoA synthetase	AK044017|Aacs|78894|acetoacetyl-CoA synthetase	AK147189|Aacs|78894|acetoacetyl-CoA synthetase	AK150266|Aacs|78894|acetoacetyl-CoA synthetase	AK165418|Aacs|78894|acetoacetyl-CoA synthetase	AK165457|Aacs|78894|acetoacetyl-CoA synthetase	AK170120|Aacs|78894|acetoacetyl-CoA synthetase	AK170653|Aacs|78894|acetoacetyl-CoA synthetase	AK170856|Aacs|78894|acetoacetyl-CoA synthetase	NM_030210|Aacs|78894|acetoacetyl-CoA synthetase
mm9_v1_chr4_-_134091164_134091245	0.0673177	NKX3-2.p2	AK080126|Fam54b|76824|family with sequence similarity 54, member B	AK010825|Fam54b|76824|family with sequence similarity 54, member B	AK089141|Fam54b|76824|family with sequence similarity 54, member B	AK145362|Fam54b|76824|family with sequence similarity 54, member B	AK171703|Fam54b|76824|family with sequence similarity 54, member B	AK169047|Fam54b|76824|family with sequence similarity 54, member B
mm9_v1_chr12_+_45429894_45429900	0.0671343	NKX3-2.p2	AK048567|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr5_+_138526303_138526341	0.0670935	NKX3-2.p2	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr11_+_70467599_70467631	0.0670417	NKX3-2.p2	AK131636|Pfn1|18643|profilin 1
mm9_v1_chr6_+_21899614_21899692	0.0665282	NKX3-2.p2	NM_023626|Ing3|71777|inhibitor of growth family, member 3	AY007791|Ing3|71777|inhibitor of growth family, member 3	AK080787|Ing3|71777|inhibitor of growth family, member 3	AK131993|Ing3|71777|inhibitor of growth family, member 3	BC018342|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr17_+_45570766_45570813	0.0664416	NKX3-2.p2	AK045689|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK046225|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK083460|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK171144|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK162357|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK140548|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene
mm9_v1_chr11_+_110260435_110260577	0.0663946	NKX3-2.p2	AK043482|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK086722|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK138757|Map2k6|26399|mitogen-activated protein kinase kinase 6	NM_011943|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK077712|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK140289|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK141708|Map2k6|26399|mitogen-activated protein kinase kinase 6	BC075652|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK162671|Map2k6|26399|mitogen-activated protein kinase kinase 6	X97052|Map2k6|26399|mitogen-activated protein kinase kinase 6
mm9_v1_chr7_+_29478162_29478199	0.0663858	NKX3-2.p2	AK158463|Fbxo27|233040|F-box protein 27	NM_001163702|Fbxo27|233040|F-box protein 27	AK140275|Fbxo27|233040|F-box protein 27	BC075656|Fbxo27|233040|F-box protein 27
mm9_v1_chr8_-_72758275_72758364	0.0662376	NKX3-2.p2	BC048396|Armc6|76813|armadillo repeat containing 6	BC043070|Armc6|76813|armadillo repeat containing 6	BC055779|Armc6|76813|armadillo repeat containing 6	NM_133972|Armc6|76813|armadillo repeat containing 6	AK010815|Armc6|76813|armadillo repeat containing 6	AK081550|Armc6|76813|armadillo repeat containing 6
mm9_v1_chr19_-_3575695_3575758	0.0660006	NKX3-2.p2	AK129392|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	AK088526|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	BC008529|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	AK035236|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	AK015925|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	AK018652|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	NM_001164159|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	NM_028999|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	NM_029456|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3
mm9_v1_chr4_+_134052888_134052899	0.0656943	NKX3-2.p2	AK009450|Paqr7|71904|progestin and adipoQ receptor family member VII	NM_027995|Paqr7|71904|progestin and adipoQ receptor family member VII	AK170307|Paqr7|71904|progestin and adipoQ receptor family member VII
mm9_v1_chr12_-_76697229_76697243	0.0656939	NKX3-2.p2	AK053228|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform	AK133824|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm9_v1_chr3_-_81949667_81949798	0.0656298	NKX3-2.p2	BC057327|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK031305|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK028558|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK004815|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AF297082|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	NM_021896|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3
mm9_v1_chr12_-_105195097_105195135	0.0656255	NKX3-2.p2	M75717|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	BC061176|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	NM_009247|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK004999|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK135650|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E
mm9_v1_chr17_-_45570655_45570685	0.0653475	NKX3-2.p2	BC031480|Cdc5l|71702|cell division cycle 5-like (S. pombe)	NM_152810|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK004547|Cdc5l|71702|cell division cycle 5-like (S. pombe)
mm9_v1_chr4_-_126430511_126430686	0.0650565	NKX3-2.p2	BC017126|Ncdn|26562|neurochondrin	AK154889|Ncdn|26562|neurochondrin	AK170502|Ncdn|26562|neurochondrin	NM_011986|Ncdn|26562|neurochondrin
mm9_v1_chr8_+_109580775_109580831	0.0647133	NKX3-2.p2	AK003739|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	NM_001164472|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	NM_025391|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	BC003972|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	AK006057|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	AK014290|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)
mm9_v1_chr11_-_95926384_95926408	0.0646363	NKX3-2.p2	AK152529|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	AK153328|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)
mm9_v1_chr6_-_115625875_115625915	0.0644677	NKX3-2.p2	AB057663|Raf1|110157|v-raf-leukemia viral oncogene 1	AB077145|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr10_-_6979959_6980009	0.0644669	NKX3-2.p2	BC055717|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr9_-_111174027_111174065	0.0637787	NKX3-2.p2	AF250844|Mlh1|17350|mutL homolog 1 (E. coli)	AK163861|Mlh1|17350|mutL homolog 1 (E. coli)	AK168849|Mlh1|17350|mutL homolog 1 (E. coli)	AK145646|Mlh1|17350|mutL homolog 1 (E. coli)	BC021815|Mlh1|17350|mutL homolog 1 (E. coli)
mm9_v1_chr2_-_131855504_131855666	0.063747	NKX3-2.p2	BC057402|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2	AK028384|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr11_-_87172419_87172533	0.0636631	NKX3-2.p2	AK053696|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138900|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138903|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	NM_177167|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chr9_+_110921791_110921833	0.063648	NKX3-2.p2	AK036491|Ltf|17002|lactotransferrin	AK144556|Ltf|17002|lactotransferrin	AK150799|Ltf|17002|lactotransferrin	AK151822|Ltf|17002|lactotransferrin	AK164781|Ltf|17002|lactotransferrin	D88510|Ltf|17002|lactotransferrin	NM_008522|Ltf|17002|lactotransferrin	BC008530|Ltf|17002|lactotransferrin	AY792500|Ltf|17002|lactotransferrin	CT010339|Ltf|17002|lactotransferrin	FJ538998|Ltf|17002|lactotransferrin	J03298|Ltf|17002|lactotransferrin
mm9_v1_chr3_+_32428382_32428415	0.063598	NKX3-2.p2	AK141611|Mfn1|67414|mitofusin 1	NM_024200|Mfn1|67414|mitofusin 1	AK018181|Mfn1|67414|mitofusin 1	AK220169|Mfn1|67414|mitofusin 1
mm9_v1_chr16_-_76373266_76373271	0.0635291	NKX3-2.p2	AK156233|Nrip1|268903|nuclear receptor interacting protein 1	AK157467|Nrip1|268903|nuclear receptor interacting protein 1
mm9_v1_chr12_+_78339999_78340029	0.0632166	NKX3-2.p2	AK048520|Fut8|53618|fucosyltransferase 8	NM_016893|Fut8|53618|fucosyltransferase 8	AK163494|Fut8|53618|fucosyltransferase 8
mm9_v1_chr15_+_38944419_38944480	0.0632104	NKX3-2.p2	NM_198606|Dcaf13|223499|DDB1 and CUL4 associated factor 13	BC060375|Dcaf13|223499|DDB1 and CUL4 associated factor 13
mm9_v1_chr7_-_25873560_25873562	0.0631759	NKX3-2.p2	
mm9_v1_chr11_+_97888237_97888268	0.0631626	NKX3-2.p2	NM_009078|Rpl19|19921|ribosomal protein L19	AK168232|Rpl19|19921|ribosomal protein L19	AK168481|Rpl19|19921|ribosomal protein L19
mm9_v1_chr18_-_70212948_70213022	0.0631266	NKX3-2.p2	BC032928|Rab27b|80718|RAB27b, member RAS oncogene family	AB067775|Rab27b|80718|RAB27b, member RAS oncogene family	AF328893|Rab27b|80718|RAB27b, member RAS oncogene family	BC018443|Rab27b|80718|RAB27b, member RAS oncogene family	NM_030554|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr2_-_130249983_130250049	0.0631252	NKX3-2.p2	AK081584|Fam113a|319513|family with sequence similarity 113, member A	AK032762|Fam113a|319513|family with sequence similarity 113, member A	AK045248|Fam113a|319513|family with sequence similarity 113, member A	AK044590|Fam113a|319513|family with sequence similarity 113, member A	AK027964|Fam113a|319513|family with sequence similarity 113, member A	AK032354|Fam113a|319513|family with sequence similarity 113, member A	AK077745|Fam113a|319513|family with sequence similarity 113, member A	AK161998|Fam113a|319513|family with sequence similarity 113, member A	AK041939|Fam113a|319513|family with sequence similarity 113, member A	AK085613|Fam113a|319513|family with sequence similarity 113, member A	NM_178762|Fam113a|319513|family with sequence similarity 113, member A	AK079521|Fam113a|319513|family with sequence similarity 113, member A
mm9_v1_chr1_-_156993820_156993943	0.0626977	NKX3-2.p2	AF010448|Mr1|15064|major histocompatibility complex, class I-related	AF010449|Mr1|15064|major histocompatibility complex, class I-related	AF010450|Mr1|15064|major histocompatibility complex, class I-related	AF010452|Mr1|15064|major histocompatibility complex, class I-related	AF010453|Mr1|15064|major histocompatibility complex, class I-related	U94989|Mr1|15064|major histocompatibility complex, class I-related	AK162712|Mr1|15064|major histocompatibility complex, class I-related	NM_008209|Mr1|15064|major histocompatibility complex, class I-related	BC026137|Mr1|15064|major histocompatibility complex, class I-related	AK042119|Mr1|15064|major histocompatibility complex, class I-related	AK137171|Mr1|15064|major histocompatibility complex, class I-related	AK144040|Mr1|15064|major histocompatibility complex, class I-related	AK041171|Mr1|15064|major histocompatibility complex, class I-related
mm9_v1_chr10_+_84085091_84085181	0.0625461	NKX3-2.p2	AK039366|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	AK039244|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	BC068143|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B	NM_027423|Polr3b|70428|polymerase (RNA) III (DNA directed) polypeptide B
mm9_v1_chr7_+_35904310_35904321	0.0625417	NKX3-2.p2	NM_007678|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC011118|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC028890|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC051102|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC058161|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha
mm9_v1_chr8_+_107800316_107800347	0.0624434	NKX3-2.p2	AK079536|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	BC027290|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AY459322|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AK053846|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	NM_030152|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm9_v1_chr7_-_88046106_88046156	0.0624261	NKX3-2.p2	BC028870|Wdr73|71968|WD repeat domain 73	BC068122|Wdr73|71968|WD repeat domain 73	BC087940|Wdr73|71968|WD repeat domain 73	AK034740|Wdr73|71968|WD repeat domain 73	AK169377|Wdr73|71968|WD repeat domain 73	AK004708|Wdr73|71968|WD repeat domain 73	AK010448|Wdr73|71968|WD repeat domain 73	AK220207|Wdr73|71968|WD repeat domain 73	AK049132|Wdr73|71968|WD repeat domain 73	AK169527|Wdr73|71968|WD repeat domain 73	NM_028026|Wdr73|71968|WD repeat domain 73
mm9_v1_chr8_+_114535301_114535369	0.0623386	NKX3-2.p2	AK047222|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK087729|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK165074|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AB041559|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK053864|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK081557|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK163044|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AB041557|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK084563|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK041613|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK051818|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	BC012270|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein
mm9_v1_chr11_+_117848190_117848253	0.0622514	NKX3-2.p2	AK163967|Pgs1|74451|phosphatidylglycerophosphate synthase 1	AK153001|Pgs1|74451|phosphatidylglycerophosphate synthase 1
mm9_v1_chr19_-_7061867_7061910	0.0622052	NKX3-2.p2	U43837|Vegfb|22340|vascular endothelial growth factor B	AK187930|Vegfb|22340|vascular endothelial growth factor B	AK184156|Vegfb|22340|vascular endothelial growth factor B	AK184635|Vegfb|22340|vascular endothelial growth factor B
mm9_v1_chr1_-_186556329_186556486	0.0622045	NKX3-2.p2	AK036435|Hlx|15284|H2.0-like homeobox	BC064068|Hlx|15284|H2.0-like homeobox	NM_008250|Hlx|15284|H2.0-like homeobox	X58250|Hlx|15284|H2.0-like homeobox
mm9_v1_chr1_+_36568707_36568722	0.0621843	NKX3-2.p2	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr4_+_3502021_3502156	0.062072	NKX3-2.p2	BC058183|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK044895|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	NM_054089|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK030953|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	BC075728|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK050044|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AK170949|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)	AF389908|Tgs1|116940|trimethylguanosine synthase homolog (S. cerevisiae)
mm9_v1_chr8_-_124468764_124468811	0.0620439	NKX3-2.p2	BC030174|Car5a|12352|carbonic anhydrase 5a, mitochondrial	X51971|Car5a|12352|carbonic anhydrase 5a, mitochondrial	NM_007608|Car5a|12352|carbonic anhydrase 5a, mitochondrial
mm9_v1_chr6_+_135148004_135148077	0.0620251	NKX3-2.p2	AK169892|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	NM_028982|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137674|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK018428|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK155128|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK039401|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC079676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene
mm9_v1_chrX_+_151696991_151697138	0.0619062	NKX3-2.p2	AK168713|Acot9|56360|acyl-CoA thioesterase 9	NM_019736|Acot9|56360|acyl-CoA thioesterase 9	AK076513|Acot9|56360|acyl-CoA thioesterase 9	BC021763|Acot9|56360|acyl-CoA thioesterase 9	AK002892|Acot9|56360|acyl-CoA thioesterase 9	AK009717|Acot9|56360|acyl-CoA thioesterase 9	AK088082|Acot9|56360|acyl-CoA thioesterase 9	AK170876|Acot9|56360|acyl-CoA thioesterase 9	AJ238893|Acot9|56360|acyl-CoA thioesterase 9	AB028898|Acot9|56360|acyl-CoA thioesterase 9
mm9_v1_chr1_-_37597847_37597897	0.061889	NKX3-2.p2	AK155724|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm9_v1_chr11_-_69609411_69609422	0.0618659	NKX3-2.p2	AK087554|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr11_-_50767133_50767133	0.0617367	NKX3-2.p2	NM_008936|Prop1|19127|paired like homeodomain factor 1	U77946|Prop1|19127|paired like homeodomain factor 1
mm9_v1_chr8_-_96560811_96560953	0.0617121	NKX3-2.p2	AK204985|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC090834|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK146419|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK160147|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK012308|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK020150|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK019433|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK147061|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC008270|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK011688|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	NM_026623|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21
mm9_v1_chrX_+_6154374_6154423	0.0615676	NKX3-2.p2	AK052531|Shroom4|208431|shroom family member 4	AK173129|Shroom4|208431|shroom family member 4
mm9_v1_chr13_-_101500877_101500928	0.0615524	NKX3-2.p2	X74145|Cdk7|12572|cyclin-dependent kinase 7	BC068160|Cdk7|12572|cyclin-dependent kinase 7	AK039084|Cdk7|12572|cyclin-dependent kinase 7	AK168286|Cdk7|12572|cyclin-dependent kinase 7	NM_009874|Cdk7|12572|cyclin-dependent kinase 7
mm9_v1_chr11_-_3271367_3271408	0.0613227	NKX3-2.p2	AB005132|Limk2|16886|LIM motif-containing protein kinase 2	NM_173053|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr17_-_90436488_90436574	0.061263	NKX3-2.p2	AJ006802|Nrxn1|18189|neurexin I
mm9_v1_chr16_-_17530777_17530885	0.0612442	NKX3-2.p2	AK007329|Thap7|69009|THAP domain containing 7
mm9_v1_chrX_+_20281028_20281089	0.0610674	NKX3-2.p2	NM_145628|Usp11|236733|ubiquitin specific peptidase 11	AK031767|Usp11|236733|ubiquitin specific peptidase 11	AK166523|Usp11|236733|ubiquitin specific peptidase 11	AK049053|Usp11|236733|ubiquitin specific peptidase 11
mm9_v1_chr2_+_35992148_35992200	0.0609401	NKX3-2.p2	BC019787|Mrrf|67871|mitochondrial ribosome recycling factor	AK010018|Mrrf|67871|mitochondrial ribosome recycling factor
mm9_v1_chr2_-_18314387_18314456	0.0608065	NKX3-2.p2	AK144228|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	BC080300|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	AK133582|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	AK012505|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_001190817|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_007869|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1
mm9_v1_chr12_-_76697214_76697220	0.0606965	NKX3-2.p2	AK078894|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform	AK132432|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm9_v1_chr10_+_58684631_58684700	0.0606474	NKX3-2.p2	AK030944|Ankrd57|268301|ankyrin repeat domain 57	NM_172939|Ankrd57|268301|ankyrin repeat domain 57	AK050497|Ankrd57|268301|ankyrin repeat domain 57
mm9_v1_chr7_-_104566013_104566047	0.0606227	NKX3-2.p2	BC009165|Thrsp|21835|thyroid hormone responsive SPOT14 homolog (Rattus)	NM_009381|Thrsp|21835|thyroid hormone responsive SPOT14 homolog (Rattus)	AK050300|Thrsp|21835|thyroid hormone responsive SPOT14 homolog (Rattus)
mm9_v1_chr11_+_121098532_121098610	0.0606073	NKX3-2.p2	NM_026272|Narf|67608|nuclear prelamin A recognition factor	AK076232|Narf|67608|nuclear prelamin A recognition factor	AK081305|Narf|67608|nuclear prelamin A recognition factor	AK013432|Narf|67608|nuclear prelamin A recognition factor	BC016090|Narf|67608|nuclear prelamin A recognition factor
mm9_v1_chr9_-_119932620_119932715	0.0604752	NKX3-2.p2	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr11_+_34934956_34934982	0.0601956	NKX3-2.p2	NM_011412|Slit3|20564|slit homolog 3 (Drosophila)	AK147292|Slit3|20564|slit homolog 3 (Drosophila)	BC150780|Slit3|20564|slit homolog 3 (Drosophila)
mm9_v1_chrX_-_17149313_17149460	0.0601608	NKX3-2.p2	BC012515|Fundc1|72018|FUN14 domain containing 1	AK168868|Fundc1|72018|FUN14 domain containing 1	BC030487|Fundc1|72018|FUN14 domain containing 1	AK005163|Fundc1|72018|FUN14 domain containing 1	NM_028058|Fundc1|72018|FUN14 domain containing 1
mm9_v1_chr12_-_88607158_88607275	0.0600382	NKX3-2.p2	BC016646|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK082261|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK049643|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK079055|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK038165|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK046322|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK145043|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142580|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142581|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK020129|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator
mm9_v1_chr11_-_98590680_98590748	0.0598943	NKX3-2.p2	AF126543|Med24|23989|mediator complex subunit 24	AK193218|Med24|23989|mediator complex subunit 24	AK020269|Med24|23989|mediator complex subunit 24	AK154618|Med24|23989|mediator complex subunit 24	AK158385|Med24|23989|mediator complex subunit 24	NM_011869|Med24|23989|mediator complex subunit 24
mm9_v1_chr19_+_18706439_18706451	0.0597364	NKX3-2.p2	AK169962|BC016495|225994|cDNA sequence BC016495
mm9_v1_chr9_-_44215391_44215460	0.059713	NKX3-2.p2	AK032168|Trappc4|60409|trafficking protein particle complex 4	AK005276|Trappc4|60409|trafficking protein particle complex 4
mm9_v1_chr13_-_69138418_69138432	0.0596334	NKX3-2.p2	AK132312|Adcy2|210044|adenylate cyclase 2	NM_153534|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr11_+_78059452_78059655	0.059565	NKX3-2.p2	AK002496|Sdf2|20316|stromal cell derived factor 2	BC062881|Sdf2|20316|stromal cell derived factor 2	BC087871|Sdf2|20316|stromal cell derived factor 2	D50646|Sdf2|20316|stromal cell derived factor 2
mm9_v1_chr12_-_106923394_106923487	0.0593901	NKX3-2.p2	AK085790|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	AK083213|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	BC062182|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	AK086802|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	NM_029654|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)
mm9_v1_chr18_-_38094995_38095137	0.0593694	NKX3-2.p2	AK140734|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK220466|Diap1|13367|diaphanous homolog 1 (Drosophila)	NM_007858|Diap1|13367|diaphanous homolog 1 (Drosophila)	U96963|Diap1|13367|diaphanous homolog 1 (Drosophila)	BC070412|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK012707|Diap1|13367|diaphanous homolog 1 (Drosophila)
mm9_v1_chr6_-_136121885_136121906	0.0591833	NKX3-2.p2	AK163195|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm9_v1_chr2_+_167247181_167247253	0.0585511	NKX3-2.p2	AB089793|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	BC030879|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK049410|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK051791|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	NM_148929|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	NM_178371|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK004622|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK037377|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK173069|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK018301|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK160826|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	BC058947|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK143281|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AF482993|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8
mm9_v1_chr1_+_173275799_173275833	0.0583941	NKX3-2.p2	BC049606|Pfdn2|18637|prefoldin 2	NM_011070|Pfdn2|18637|prefoldin 2
mm9_v1_chr15_+_75740152_75740190	0.058367	NKX3-2.p2	AK051177|Tigd5|105734|tigger transposable element derived 5	BC099838|Tigd5|105734|tigger transposable element derived 5	NM_178646|Tigd5|105734|tigger transposable element derived 5	AK036241|Tigd5|105734|tigger transposable element derived 5	AK086663|Tigd5|105734|tigger transposable element derived 5	AK165093|Tigd5|105734|tigger transposable element derived 5	BC138289|Tigd5|105734|tigger transposable element derived 5
mm9_v1_chr13_+_118391126_118391233	0.0582875	NKX3-2.p2	AK158322|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1	NM_010408|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1
mm9_v1_chr7_+_73834774_73834871	0.0581834	NKX3-2.p2	NM_001191001|Lins|72635|lines homolog (Drosophila)	NM_152815|Lins|72635|lines homolog (Drosophila)	AK156066|Lins|72635|lines homolog (Drosophila)	AK044132|Lins|72635|lines homolog (Drosophila)	AK012554|Lins|72635|lines homolog (Drosophila)	AK171170|Lins|72635|lines homolog (Drosophila)	BC030943|Lins|72635|lines homolog (Drosophila)	BC058648|Lins|72635|lines homolog (Drosophila)
mm9_v1_chrX_+_53599573_53599586	0.0581187	NKX3-2.p2	AK142888|Zfp449|78619|zinc finger protein 449	AK036596|Zfp449|78619|zinc finger protein 449	NM_030139|Zfp449|78619|zinc finger protein 449	AK020600|Zfp449|78619|zinc finger protein 449
mm9_v1_chr15_-_75397030_75397077	0.0580236	NKX3-2.p2	AK034884|Ly6h|23934|lymphocyte antigen 6 complex, locus H	NM_001135689|Ly6h|23934|lymphocyte antigen 6 complex, locus H
mm9_v1_chr5_-_144984420_144984479	0.0579094	NKX3-2.p2	AK032858|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK034020|Tecpr1|70381|tectonin beta-propeller repeat containing 1	BC046968|Tecpr1|70381|tectonin beta-propeller repeat containing 1	NM_027410|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK163522|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr7_+_3596827_3596852	0.057822	NKX3-2.p2	AK046141|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr8_+_95379212_95379353	0.0577978	NKX3-2.p2	AK039431|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	NM_173014|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	BC144806|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	BC150666|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	AB244716|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2
mm9_v1_chr1_+_169548381_169548439	0.0577518	NKX3-2.p2	NM_001159731|Rxrg|20183|retinoid X receptor gamma	S62952|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr7_-_31514445_31514522	0.0577244	NKX3-2.p2	AK008089|Tmem147|69804|transmembrane protein 147	AK007753|Tmem147|69804|transmembrane protein 147	BC147300|Tmem147|69804|transmembrane protein 147	BC147301|Tmem147|69804|transmembrane protein 147
mm9_v1_chr7_+_108599740_108599766	0.057706	NKX3-2.p2	NM_001143849|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chrX_+_92907016_92907016	0.0576715	NKX3-2.p2	AK134628|Zc3h12b|547176|zinc finger CCCH-type containing 12B	NM_001034907|Zc3h12b|547176|zinc finger CCCH-type containing 12B
mm9_v1_chr8_+_41393330_41393406	0.0573973	NKX3-2.p2	NM_030110|Efha2|78506|EF-hand domain family, member A2
mm9_v1_chr17_+_73267643_73267665	0.0572963	NKX3-2.p2	AK020110|Lbh|77889|limb-bud and heart	NM_029999|Lbh|77889|limb-bud and heart	AF317517|Lbh|77889|limb-bud and heart	BC026827|Lbh|77889|limb-bud and heart	BC052470|Lbh|77889|limb-bud and heart
mm9_v1_chr11_-_70783455_70783486	0.0572284	NKX3-2.p2	BC032929|Nup88|19069|nucleoporin 88	AK002643|Nup88|19069|nucleoporin 88	AK050893|Nup88|19069|nucleoporin 88	AK039007|Nup88|19069|nucleoporin 88	AK028563|Nup88|19069|nucleoporin 88	AK151739|Nup88|19069|nucleoporin 88	AK166214|Nup88|19069|nucleoporin 88	NM_001083331|Nup88|19069|nucleoporin 88	AJ532593|Nup88|19069|nucleoporin 88	AK085776|Nup88|19069|nucleoporin 88	AK160619|Nup88|19069|nucleoporin 88	NM_172394|Nup88|19069|nucleoporin 88
mm9_v1_chrX_+_71516128_71516339	0.0571664	NKX3-2.p2	NM_052835|Rpl10|110954|ribosomal protein 10	AK146217|Rpl10|110954|ribosomal protein 10	AK011022|Rpl10|110954|ribosomal protein 10	AK088777|Rpl10|110954|ribosomal protein 10	AK144831|Rpl10|110954|ribosomal protein 10	AK151416|Rpl10|110954|ribosomal protein 10	AK151655|Rpl10|110954|ribosomal protein 10	AK152123|Rpl10|110954|ribosomal protein 10	AK152854|Rpl10|110954|ribosomal protein 10	AK153345|Rpl10|110954|ribosomal protein 10	AK160618|Rpl10|110954|ribosomal protein 10	AK167966|Rpl10|110954|ribosomal protein 10	AK168854|Rpl10|110954|ribosomal protein 10	BC086917|Rpl10|110954|ribosomal protein 10	M93980|Rpl10|110954|ribosomal protein 10	AK014054|Rpl10|110954|ribosomal protein 10	AK151736|Rpl10|110954|ribosomal protein 10	AK166610|Rpl10|110954|ribosomal protein 10	AK168250|Rpl10|110954|ribosomal protein 10	AK012561|Rpl10|110954|ribosomal protein 10	AK167239|Rpl10|110954|ribosomal protein 10	BC092383|Rpl10|110954|ribosomal protein 10	BC098204|Rpl10|110954|ribosomal protein 10	X75312|Rpl10|110954|ribosomal protein 10	BC048872|Rpl10|110954|ribosomal protein 10	BC099437|Rpl10|110954|ribosomal protein 10	BC024901|Rpl10|110954|ribosomal protein 10	BC082293|Rpl10|110954|ribosomal protein 10	BC083327|Rpl10|110954|ribosomal protein 10	BC006068|Rpl10|110954|ribosomal protein 10
mm9_v1_chr11_+_114536748_114536848	0.0571276	NKX3-2.p2	AK154835|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK155166|Ttyh2|117160|tweety homolog 2 (Drosophila)	NM_053273|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK168408|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK152172|Ttyh2|117160|tweety homolog 2 (Drosophila)	AK156393|Ttyh2|117160|tweety homolog 2 (Drosophila)	AF329682|Ttyh2|117160|tweety homolog 2 (Drosophila)	BC060740|Ttyh2|117160|tweety homolog 2 (Drosophila)
mm9_v1_chr6_+_29476655_29476748	0.0570196	NKX3-2.p2	AK150598|Irf5|27056|interferon regulatory factor 5	AK152042|Irf5|27056|interferon regulatory factor 5	AK171356|Irf5|27056|interferon regulatory factor 5	AK151019|Irf5|27056|interferon regulatory factor 5	AF028725|Irf5|27056|interferon regulatory factor 5	NM_012057|Irf5|27056|interferon regulatory factor 5
mm9_v1_chr9_-_44215589_44215630	0.0569366	NKX3-2.p2	AF233340|Trappc4|60409|trafficking protein particle complex 4	BC038898|Trappc4|60409|trafficking protein particle complex 4	NM_021789|Trappc4|60409|trafficking protein particle complex 4
mm9_v1_chr11_+_63892985_63892998	0.0569329	NKX3-2.p2	AK007927|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene	AK012631|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene
mm9_v1_chr1_+_99666744_99666792	0.0569029	NKX3-2.p2	AK014287|Gin1|252876|gypsy retrotransposon integrase 1	AK018404|Gin1|252876|gypsy retrotransposon integrase 1	NM_026250|Gin1|252876|gypsy retrotransposon integrase 1	AK090002|Gin1|252876|gypsy retrotransposon integrase 1	AK015243|Gin1|252876|gypsy retrotransposon integrase 1	AK169361|Gin1|252876|gypsy retrotransposon integrase 1
mm9_v1_chr12_+_4082739_4082786	0.0568191	NKX3-2.p2	AY035893|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr12_-_32635399_32635399	0.0566064	NKX3-2.p2	AK133127|Hbp1|73389|high mobility group box transcription factor 1	NM_153198|Hbp1|73389|high mobility group box transcription factor 1	NM_177993|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr10_+_86984539_86984647	0.0565965	NKX3-2.p2	NM_008777|Pah|18478|phenylalanine hydroxylase
mm9_v1_chr16_-_91597886_91597995	0.0565245	NKX3-2.p2	AK098154|Tmem50b|77975|transmembrane protein 50B	AK150773|Tmem50b|77975|transmembrane protein 50B	AK172335|Tmem50b|77975|transmembrane protein 50B	AK170684|Tmem50b|77975|transmembrane protein 50B	BC004841|Tmem50b|77975|transmembrane protein 50B	NM_030018|Tmem50b|77975|transmembrane protein 50B	AK020977|Tmem50b|77975|transmembrane protein 50B	AK152190|Tmem50b|77975|transmembrane protein 50B	AK152767|Tmem50b|77975|transmembrane protein 50B	AK133966|Tmem50b|77975|transmembrane protein 50B	AK151796|Tmem50b|77975|transmembrane protein 50B	AK155082|Tmem50b|77975|transmembrane protein 50B
mm9_v1_chr3_+_108374611_108374644	0.0565087	NKX3-2.p2	AK007227|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK007339|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_025444|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK076595|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK160171|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC021447|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr6_-_137118238_137118241	0.056355	NKX3-2.p2	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr16_+_93832365_93832557	0.056327	NKX3-2.p2	AK172896|Morc3|338467|microrchidia 3	NM_001045529|Morc3|338467|microrchidia 3	BC145705|Morc3|338467|microrchidia 3	AK144885|Morc3|338467|microrchidia 3	AK132226|Morc3|338467|microrchidia 3	BC098072|Morc3|338467|microrchidia 3
mm9_v1_chr8_-_80134485_80134517	0.0558534	NKX3-2.p2	BC004056|Tmem184c|234463|transmembrane protein 184C
mm9_v1_chr4_-_129317873_129317883	0.0557952	NKX3-2.p2	BC060227|Txlna|109658|taxilin alpha	BC065115|Txlna|109658|taxilin alpha	NM_001005506|Txlna|109658|taxilin alpha
mm9_v1_chr2_-_38920925_38921012	0.0555394	NKX3-2.p2	BC043090|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	NM_029793|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK028516|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC024637|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC053068|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK002954|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK008972|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK044987|Golga1|76899|golgi autoantigen, golgin subfamily a, 1
mm9_v1_chr3_-_98143778_98143903	0.0555194	NKX3-2.p2	BC086668|Phgdh|236539|3-phosphoglycerate dehydrogenase	BC110673|Phgdh|236539|3-phosphoglycerate dehydrogenase	AK147946|Phgdh|236539|3-phosphoglycerate dehydrogenase	AK076815|Phgdh|236539|3-phosphoglycerate dehydrogenase	AK169684|Phgdh|236539|3-phosphoglycerate dehydrogenase	NM_016966|Phgdh|236539|3-phosphoglycerate dehydrogenase
mm9_v1_chr16_+_57121795_57121895	0.0554593	NKX3-2.p2	AK145458|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC057096|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK012084|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK083586|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK150429|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	NM_138599|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK161720|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC139420|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC139421|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK169809|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK122356|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chr11_+_97888269_97888292	0.0553986	NKX3-2.p2	BC089549|Rpl19|19921|ribosomal protein L19	AK010440|Rpl19|19921|ribosomal protein L19	AK075817|Rpl19|19921|ribosomal protein L19	BC087961|Rpl19|19921|ribosomal protein L19	BC092539|Rpl19|19921|ribosomal protein L19	BC083131|Rpl19|19921|ribosomal protein L19	BC010710|Rpl19|19921|ribosomal protein L19
mm9_v1_chr9_-_99336923_99337150	0.055327	NKX3-2.p2	AK050469|Mras|17532|muscle and microspikes RAS	AB004879|Mras|17532|muscle and microspikes RAS	NM_008624|Mras|17532|muscle and microspikes RAS
mm9_v1_chr11_-_65601657_65601750	0.0552865	NKX3-2.p2	AK187893|Map2k4|26398|mitogen-activated protein kinase kinase 4	U18310|Map2k4|26398|mitogen-activated protein kinase kinase 4
mm9_v1_chr1_+_63223396_63223420	0.0552504	NKX3-2.p2	NM_018796|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chrX_+_45976916_45976963	0.0551109	NKX3-2.p2	AK051145|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AK148277|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr2_+_32143868_32143875	0.0544804	NKX3-2.p2	BC011407|Golga2|99412|golgi autoantigen, golgin subfamily a, 2
mm9_v1_chr8_+_108042645_108042656	0.0543123	NKX3-2.p2	AK155153|Hsd11b2|15484|hydroxysteroid 11-beta dehydrogenase 2	NM_008289|Hsd11b2|15484|hydroxysteroid 11-beta dehydrogenase 2	BC014753|Hsd11b2|15484|hydroxysteroid 11-beta dehydrogenase 2	BC066209|Hsd11b2|15484|hydroxysteroid 11-beta dehydrogenase 2
mm9_v1_chr9_+_121628527_121628572	0.0542305	NKX3-2.p2	BC048414|Nktr|18087|natural killer tumor recognition sequence	AK035582|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr2_-_73730605_73730700	0.0540025	NKX3-2.p2	AK139844|Atf2|11909|activating transcription factor 2	AK146839|Atf2|11909|activating transcription factor 2	AK139515|Atf2|11909|activating transcription factor 2	BC079883|Atf2|11909|activating transcription factor 2	BC085137|Atf2|11909|activating transcription factor 2	BC082596|Atf2|11909|activating transcription factor 2	AK035438|Atf2|11909|activating transcription factor 2	AK140855|Atf2|11909|activating transcription factor 2	AK144977|Atf2|11909|activating transcription factor 2	AK051591|Atf2|11909|activating transcription factor 2	AK087424|Atf2|11909|activating transcription factor 2	NM_001025093|Atf2|11909|activating transcription factor 2	NM_009715|Atf2|11909|activating transcription factor 2	AK145887|Atf2|11909|activating transcription factor 2
mm9_v1_chr14_-_34260323_34260352	0.0539858	NKX3-2.p2	AK139498|Mapk8|26419|mitogen-activated protein kinase 8	AK032486|Mapk8|26419|mitogen-activated protein kinase 8	AK043102|Mapk8|26419|mitogen-activated protein kinase 8	AK085745|Mapk8|26419|mitogen-activated protein kinase 8	AK030767|Mapk8|26419|mitogen-activated protein kinase 8	NM_016700|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr3_-_57455612_57455659	0.0539476	NKX3-2.p2	AK083784|Commd2|52245|COMM domain containing 2	AK047941|Commd2|52245|COMM domain containing 2	AK089100|Commd2|52245|COMM domain containing 2
mm9_v1_chr7_+_87414540_87414576	0.0538326	NKX3-2.p2	AK032076|Vps33b|233405|vacuolar protein sorting 33B (yeast)	NM_178070|Vps33b|233405|vacuolar protein sorting 33B (yeast)	BC011059|Vps33b|233405|vacuolar protein sorting 33B (yeast)
mm9_v1_chr11_-_119959959_119959998	0.0537836	NKX3-2.p2	BC094318|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	BC049110|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene	BC064313|2410002I01Rik|78777|RIKEN cDNA 2410002I01 gene
mm9_v1_chr5_-_124804583_124804698	0.0537202	NKX3-2.p2	BC083075|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	NM_013812|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	AK004852|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr9_+_62705890_62705945	0.0536935	NKX3-2.p2	AY061807|Calml4|75600|calmodulin-like 4	NM_001102468|Calml4|75600|calmodulin-like 4	NM_138304|Calml4|75600|calmodulin-like 4	AK008039|Calml4|75600|calmodulin-like 4	BC013541|Calml4|75600|calmodulin-like 4	AK146656|Calml4|75600|calmodulin-like 4	BC023475|Calml4|75600|calmodulin-like 4
mm9_v1_chr4_-_20705698_20705814	0.0535928	NKX3-2.p2	AK051427|Nkain3|269513|Na+/K+ transporting ATPase interacting 3	AK053823|Nkain3|269513|Na+/K+ transporting ATPase interacting 3	AK141456|Nkain3|269513|Na+/K+ transporting ATPase interacting 3	BC075683|Nkain3|269513|Na+/K+ transporting ATPase interacting 3	NM_172987|Nkain3|269513|Na+/K+ transporting ATPase interacting 3
mm9_v1_chr7_+_25039812_25039838	0.0533917	NKX3-2.p2	AK032355|Zfp108|54678|zinc finger protein 108	NM_018791|Zfp108|54678|zinc finger protein 108	AF167315|Zfp108|54678|zinc finger protein 108
mm9_v1_chr4_-_40704878_40704878	0.0532959	NKX3-2.p2	BC057446|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
mm9_v1_chrX_-_72661900_72661926	0.0527782	NKX3-2.p2	AK142198|Mtcp1|17763|mature T-cell proliferation 1	AK140533|Mtcp1|17763|mature T-cell proliferation 1
mm9_v1_chr7_-_134093094_134093095	0.0527295	NKX3-2.p2	BC111101|Asphd1|233879|aspartate beta-hydroxylase domain containing 1	NM_001039645|Asphd1|233879|aspartate beta-hydroxylase domain containing 1	AK043553|Asphd1|233879|aspartate beta-hydroxylase domain containing 1
mm9_v1_chr16_+_22920274_22920459	0.0526106	NKX3-2.p2	NM_001083904|Fetub|59083|fetuin beta	NM_021564|Fetub|59083|fetuin beta	AY138459|Fetub|59083|fetuin beta	AJ242927|Fetub|59083|fetuin beta
mm9_v1_chr14_+_105657968_105657981	0.0525827	NKX3-2.p2	BC071237|Ndfip2|76273|Nedd4 family interacting protein 2	BC106125|Ndfip2|76273|Nedd4 family interacting protein 2	AK078939|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr4_+_139178802_139178820	0.0525306	NKX3-2.p2	BC060650|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1	NM_175438|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr6_+_85865712_85865731	0.0523882	NKX3-2.p2	NM_001170488|Tprkb|69786|Tp53rk binding protein	NM_176842|Tprkb|69786|Tp53rk binding protein	AK007695|Tprkb|69786|Tp53rk binding protein	BC027162|Tprkb|69786|Tp53rk binding protein
mm9_v1_chr12_-_103196366_103196464	0.0523509	NKX3-2.p2	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr18_+_69753146_69753168	0.0523334	NKX3-2.p2	AK151433|Tcf4|21413|transcription factor 4
mm9_v1_chr2_+_28048592_28048772	0.0522059	NKX3-2.p2	NM_001038613|Olfm1|56177|olfactomedin 1	NM_001038614|Olfm1|56177|olfactomedin 1	AK003031|Olfm1|56177|olfactomedin 1
mm9_v1_chr12_-_86691817_86691869	0.0521159	NKX3-2.p2	AK191153|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK198152|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK201939|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK206502|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK207697|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK216393|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC006774|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr1_-_99666564_99666675	0.0520449	NKX3-2.p2	AK087712|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK149804|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK129140|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK166095|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	NM_173760|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2
mm9_v1_chr7_+_107154913_107155009	0.0520447	NKX3-2.p2	NM_133709|Chrdl2|69121|chordin-like 2	BC019399|Chrdl2|69121|chordin-like 2	AF338222|Chrdl2|69121|chordin-like 2
mm9_v1_chr3_+_94203140_94203230	0.0519117	NKX3-2.p2	AK040952|Lingo4|320747|leucine rich repeat and Ig domain containing 4	NM_177250|Lingo4|320747|leucine rich repeat and Ig domain containing 4	BC117866|Lingo4|320747|leucine rich repeat and Ig domain containing 4	BC117867|Lingo4|320747|leucine rich repeat and Ig domain containing 4
mm9_v1_chr9_-_9239054_9239155	0.051818	NKX3-2.p2	AK082857|Arhgap42|71544|Rho GTPase activating protein 42
mm9_v1_chr3_+_104591955_104591985	0.0518142	NKX3-2.p2	AK160650|Rhoc|11853|ras homolog gene family, member C	X80638|Rhoc|11853|ras homolog gene family, member C	BC004627|Rhoc|11853|ras homolog gene family, member C
mm9_v1_chr17_-_7152648_7152744	0.0516759	NKX3-2.p2	AK005904|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	AK016473|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	AK161285|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	AK006083|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	NM_001083945|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	AK076872|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)
mm9_v1_chr14_-_62058627_62058783	0.0515021	NKX3-2.p2	AF020772|Kpna3|16648|karyopherin (importin) alpha 3	AK011559|Kpna3|16648|karyopherin (importin) alpha 3	AK049373|Kpna3|16648|karyopherin (importin) alpha 3	BC026885|Kpna3|16648|karyopherin (importin) alpha 3	AK161664|Kpna3|16648|karyopherin (importin) alpha 3	NM_008466|Kpna3|16648|karyopherin (importin) alpha 3
mm9_v1_chr4_-_57156022_57156027	0.0511394	NKX3-2.p2	AK144315|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b	NM_019427|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr7_-_135441602_135441616	0.0511144	NKX3-2.p2	BC094040|BC017158|233913|cDNA sequence BC017158	AK154566|BC017158|233913|cDNA sequence BC017158	BC017158|BC017158|233913|cDNA sequence BC017158
mm9_v1_chr14_+_63456514_63456721	0.0511047	NKX3-2.p2	AK086275|Wdfy2|268752|WD repeat and FYVE domain containing 2	NM_175546|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK131958|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK169499|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK151817|Wdfy2|268752|WD repeat and FYVE domain containing 2	BC116632|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK045072|Wdfy2|268752|WD repeat and FYVE domain containing 2
mm9_v1_chr9_+_44863270_44863299	0.0509736	NKX3-2.p2	AK041037|Mpzl3|319742|myelin protein zero-like 3	NM_176993|Mpzl3|319742|myelin protein zero-like 3	AK049878|Mpzl3|319742|myelin protein zero-like 3	BC132150|Mpzl3|319742|myelin protein zero-like 3	EF102773|Mpzl3|319742|myelin protein zero-like 3	NM_001093749|Mpzl3|319742|myelin protein zero-like 3
mm9_v1_chr6_+_30758582_30758676	0.0509339	NKX3-2.p2	AK014219|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr1_-_13364092_13364163	0.0509193	NKX3-2.p2	AF000582|Ncoa2|17978|nuclear receptor coactivator 2	AK048972|Ncoa2|17978|nuclear receptor coactivator 2	AK087443|Ncoa2|17978|nuclear receptor coactivator 2	U39060|Ncoa2|17978|nuclear receptor coactivator 2	AK052117|Ncoa2|17978|nuclear receptor coactivator 2	NM_001077695|Ncoa2|17978|nuclear receptor coactivator 2	NM_008678|Ncoa2|17978|nuclear receptor coactivator 2
mm9_v1_chr5_+_34808777_34808878	0.0507694	NKX3-2.p2	AK134942|Fam193a|231128|family with sequence similarity 193, member A
mm9_v1_chr7_+_26466176_26466176	0.0506861	NKX3-2.p2	BC028440|B9d2|232987|B9 protein domain 2	NM_172148|B9d2|232987|B9 protein domain 2
mm9_v1_chr2_+_26766333_26766340	0.0504637	NKX3-2.p2	BC029992|Rpl7a|27176|ribosomal protein L7A	BC080663|Rpl7a|27176|ribosomal protein L7A	BC080669|Rpl7a|27176|ribosomal protein L7A	BC084678|Rpl7a|27176|ribosomal protein L7A	BC091769|Rpl7a|27176|ribosomal protein L7A	BC065176|Rpl7a|27176|ribosomal protein L7A
mm9_v1_chr15_+_99125666_99125690	0.0504338	NKX3-2.p2	BC058389|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)	BC082994|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)	AK140075|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)	AK164947|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm9_v1_chr10_-_127057998_127058060	0.0503835	NKX3-2.p2	AK153375|Lrp1|16971|low density lipoprotein receptor-related protein 1	AK153549|Lrp1|16971|low density lipoprotein receptor-related protein 1	AK149974|Lrp1|16971|low density lipoprotein receptor-related protein 1
mm9_v1_chr2_-_131855722_131855755	0.050371	NKX3-2.p2	NM_175445|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr10_+_82448326_82448493	0.0503633	NKX3-2.p2	BC137629|Chst11|58250|carbohydrate sulfotransferase 11	BC144793|Chst11|58250|carbohydrate sulfotransferase 11
mm9_v1_chr8_-_109580588_109580636	0.0503535	NKX3-2.p2	AK145515|Cog8|97484|component of oligomeric golgi complex 8	NM_139229|Cog8|97484|component of oligomeric golgi complex 8
mm9_v1_chr9_+_44446796_44446798	0.0503335	NKX3-2.p2	AK156303|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr8_+_108404773_108404850	0.0501819	NKX3-2.p2	AK152963|Edc4|234699|enhancer of mRNA decapping 4	AK146527|Edc4|234699|enhancer of mRNA decapping 4	BC053081|Edc4|234699|enhancer of mRNA decapping 4	NM_181594|Edc4|234699|enhancer of mRNA decapping 4
mm9_v1_chr6_-_113327732_113327755	0.0501485	NKX3-2.p2	
mm9_v1_chr8_+_130883291_130883299	0.0500914	NKX3-2.p2	AK135428|Nrp1|18186|neuropilin 1
mm9_v1_chr6_-_39675456_39675512	0.0500376	NKX3-2.p2	AK140431|Braf|109880|Braf transforming gene	NM_139294|Braf|109880|Braf transforming gene
mm9_v1_chr11_+_83777922_83777974	0.0499962	NKX3-2.p2	NM_001115009|Synrg|217030|synergin, gamma	BC056370|Synrg|217030|synergin, gamma	NM_194341|Synrg|217030|synergin, gamma
mm9_v1_chr2_+_23176765_23176795	0.0498078	NKX3-2.p2	AK038402|Nxph2|18232|neurexophilin 2	NM_008752|Nxph2|18232|neurexophilin 2	BC106863|Nxph2|18232|neurexophilin 2	BC106864|Nxph2|18232|neurexophilin 2
mm9_v1_chr6_+_85865746_85865786	0.049639	NKX3-2.p2	BC024858|Tprkb|69786|Tp53rk binding protein	AK188541|Tprkb|69786|Tp53rk binding protein
mm9_v1_chr1_+_106665395_106665416	0.0496002	NKX3-2.p2	AK034475|Cdh20|23836|cadherin 20	NM_011800|Cdh20|23836|cadherin 20	BC119606|Cdh20|23836|cadherin 20	BC119607|Cdh20|23836|cadherin 20
mm9_v1_chr2_+_24132788_24133018	0.0495274	NKX3-2.p2	AK008977|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK009741|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK076547|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_019451|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK010020|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF200495|Il1f5|54450|interleukin 1 family, member 5 (delta)	AJ250429|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132600|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132602|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF230378|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr19_-_9003845_9003845	0.0494314	NKX3-2.p2	AK133529|Rom1|19881|rod outer segment membrane protein 1	NM_009073|Rom1|19881|rod outer segment membrane protein 1
mm9_v1_chr19_+_54003803_54003809	0.0494273	NKX3-2.p2	AK050175|Pdcd4|18569|programmed cell death 4
mm9_v1_chr5_-_125821251_125821395	0.0494262	NKX3-2.p2	CT010222|Scarb1|20778|scavenger receptor class B, member 1	U37799|Scarb1|20778|scavenger receptor class B, member 1	AK158122|Scarb1|20778|scavenger receptor class B, member 1	AK010622|Scarb1|20778|scavenger receptor class B, member 1	AK033114|Scarb1|20778|scavenger receptor class B, member 1	AK145588|Scarb1|20778|scavenger receptor class B, member 1
mm9_v1_chr7_-_26004870_26004903	0.0494118	NKX3-2.p2	AK043908|Dedd2|67379|death effector domain-containing DNA binding protein 2	BC092250|Dedd2|67379|death effector domain-containing DNA binding protein 2	NM_207677|Dedd2|67379|death effector domain-containing DNA binding protein 2	AK135320|Dedd2|67379|death effector domain-containing DNA binding protein 2
mm9_v1_chr10_+_105907394_105907408	0.0491413	NKX3-2.p2	BC065133|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	EU568870|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_177373|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK030621|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK220491|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm9_v1_chr2_+_72018059_72018093	0.0489956	NKX3-2.p2	AK004874|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr10_+_51953451_51953613	0.0487934	NKX3-2.p2	AK014521|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1
mm9_v1_chr6_+_125046576_125046586	0.0486917	NKX3-2.p2	AK020564|Chd4|107932|chromodomain helicase DNA binding protein 4
mm9_v1_chr9_+_51021793_51021824	0.0486096	NKX3-2.p2	Z54283|Pou2af1|18985|POU domain, class 2, associating factor 1	NM_011136|Pou2af1|18985|POU domain, class 2, associating factor 1	U43788|Pou2af1|18985|POU domain, class 2, associating factor 1	AK088587|Pou2af1|18985|POU domain, class 2, associating factor 1	AK135080|Pou2af1|18985|POU domain, class 2, associating factor 1	BC058611|Pou2af1|18985|POU domain, class 2, associating factor 1
mm9_v1_chr5_+_81450617_81450617	0.0485722	NKX3-2.p2	BC088989|Lphn3|319387|latrophilin 3	NM_198702|Lphn3|319387|latrophilin 3
mm9_v1_chr18_-_33623069_33623089	0.0485194	NKX3-2.p2	BC054762|D0H4S114|27528|DNA segment, human D4S114	NM_001109990|D0H4S114|27528|DNA segment, human D4S114	X70398|D0H4S114|27528|DNA segment, human D4S114	AK048361|D0H4S114|27528|DNA segment, human D4S114	AK081502|D0H4S114|27528|DNA segment, human D4S114	AK133769|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr8_+_97296110_97296164	0.0484618	NKX3-2.p2	BC054838|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	BC057891|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	BC006650|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK040220|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AF010586|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	U92565|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr5_+_144519193_144519224	0.0484032	NKX3-2.p2	AK083834|D130017N08Rik|320064|RIKEN cDNA D130017N08 gene	AK053469|D130017N08Rik|320064|RIKEN cDNA D130017N08 gene
mm9_v1_chr1_-_107886803_107886828	0.0482527	NKX3-2.p2	
mm9_v1_chr11_-_61668486_61668601	0.0482307	NKX3-2.p2	AF145922|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	BC046778|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	BC053029|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK146620|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK122331|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK146893|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK148142|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	NM_013881|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)
mm9_v1_chr9_+_106073255_106073259	0.0482244	NKX3-2.p2	AK037620|Wdr82|77305|WD repeat domain containing 82	AK035109|Wdr82|77305|WD repeat domain containing 82	AK149692|Wdr82|77305|WD repeat domain containing 82	AK159240|Wdr82|77305|WD repeat domain containing 82	AK172474|Wdr82|77305|WD repeat domain containing 82	NM_029896|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr10_+_96079634_96079769	0.0482134	NKX3-2.p2	NM_007569|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK162764|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK149547|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC018309|Btg1|12226|B-cell translocation gene 1, anti-proliferative	L16846|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC006834|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK181728|Btg1|12226|B-cell translocation gene 1, anti-proliferative
mm9_v1_chrX_-_20539072_20539089	0.0481675	NKX3-2.p2	BC082294|Uxt|22294|ubiquitously expressed transcript	BC029258|Uxt|22294|ubiquitously expressed transcript	AF092738|Uxt|22294|ubiquitously expressed transcript
mm9_v1_chr19_-_42276620_42276741	0.0481508	NKX3-2.p2	BC032921|Sfrp5|54612|secreted frizzled-related sequence protein 5	AF117759|Sfrp5|54612|secreted frizzled-related sequence protein 5	NM_018780|Sfrp5|54612|secreted frizzled-related sequence protein 5
mm9_v1_chr2_+_135883662_135883710	0.0481322	NKX3-2.p2	NM_029530|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr16_+_24393797_24393851	0.0479768	NKX3-2.p2	AK029335|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr5_+_104888666_104888811	0.0479725	NKX3-2.p2	Y14120|Pkd2|18764|polycystic kidney disease 2
mm9_v1_chr16_-_20621287_20621552	0.0479075	NKX3-2.p2	AK013788|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147550|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147736|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147745|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC157896|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	NM_028420|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2
mm9_v1_chr7_+_133415982_133416132	0.047874	NKX3-2.p2	BC031759|Sbk1|104175|SH3-binding kinase 1	NM_145587|Sbk1|104175|SH3-binding kinase 1
mm9_v1_chr12_-_85534964_85534979	0.0476995	NKX3-2.p2	AK155547|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	AK171272|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	NM_001163502|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	AK081554|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene
mm9_v1_chr1_+_63777187_63777267	0.0476687	NKX3-2.p2	AK035322|Fastkd2|75619|FAST kinase domains 2	NM_172422|Fastkd2|75619|FAST kinase domains 2	AK038293|Fastkd2|75619|FAST kinase domains 2	AK148224|Fastkd2|75619|FAST kinase domains 2	AK087156|Fastkd2|75619|FAST kinase domains 2	AK166378|Fastkd2|75619|FAST kinase domains 2	AK167714|Fastkd2|75619|FAST kinase domains 2	AK084971|Fastkd2|75619|FAST kinase domains 2
mm9_v1_chr8_-_72662994_72663095	0.0474725	NKX3-2.p2	AF123704|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	L43164|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AF094761|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AK146148|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AK087462|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AK052298|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	NM_001025589|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	NM_011266|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein
mm9_v1_chr16_+_11322983_11323001	0.0474097	NKX3-2.p2	NM_001163498|Rundc2a|385605|RUN domain containing 2A
mm9_v1_chr9_+_21397379_21397470	0.0473993	NKX3-2.p2	AK088045|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK089121|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	BC025883|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK034762|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene
mm9_v1_chr4_+_139178924_139178962	0.0473412	NKX3-2.p2	BC056226|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr3_+_138190223_138190257	0.0473356	NKX3-2.p2	AK167097|Eif4e|13684|eukaryotic translation initiation factor 4E	M61731|Eif4e|13684|eukaryotic translation initiation factor 4E	AK082867|Eif4e|13684|eukaryotic translation initiation factor 4E	AK146757|Eif4e|13684|eukaryotic translation initiation factor 4E	BC010759|Eif4e|13684|eukaryotic translation initiation factor 4E	BC085087|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr10_+_40657980_40658124	0.0472281	NKX3-2.p2	AK080786|Wasf1|83767|WASP family 1
mm9_v1_chr4_-_102786828_102786903	0.0465362	NKX3-2.p2	BC028975|Wdr78|242584|WD repeat domain 78	AK087151|E030030F06Rik|320382|RIKEN cDNA E030030F06 gene	NM_146254|Wdr78|242584|WD repeat domain 78
mm9_v1_chr8_+_28090358_28090406	0.0465088	NKX3-2.p2	
mm9_v1_chr4_+_154998977_154998977	0.0464018	NKX3-2.p2	AK077668|Cdk11b|12537|cyclin-dependent kinase 11B	NM_007661|Cdk11b|12537|cyclin-dependent kinase 11B
mm9_v1_chr8_+_79426245_79426406	0.046284	NKX3-2.p2	BC133713|Nr3c2|110784|nuclear receptor subfamily 3, group C, member 2	NM_001083906|Nr3c2|110784|nuclear receptor subfamily 3, group C, member 2
mm9_v1_chr14_+_102239673_102239864	0.0462809	NKX3-2.p2	AK053129|Lmo7|380928|LIM domain only 7	AK143133|Lmo7|380928|LIM domain only 7	AK129231|Lmo7|380928|LIM domain only 7
mm9_v1_chr11_-_48927255_48927258	0.0462319	NKX3-2.p2	BC110470|Olfr1396|258334|olfactory receptor 1396	BC110471|Olfr1396|258334|olfactory receptor 1396	NM_146337|Olfr1396|258334|olfactory receptor 1396
mm9_v1_chr5_+_111846284_111846381	0.0462214	NKX3-2.p2	AK142207|Mn1|433938|meningioma 1
mm9_v1_chr10_-_12587945_12588041	0.0459764	NKX3-2.p2	BC062163|Utrn|22288|utrophin	BC011062|Utrn|22288|utrophin
mm9_v1_chr9_+_55056740_55056801	0.0459383	NKX3-2.p2	NM_028049|Fbxo22|71999|F-box protein 22	AK002745|Fbxo22|71999|F-box protein 22	BC018273|Fbxo22|71999|F-box protein 22
mm9_v1_chr11_-_72990492_72990557	0.0459298	NKX3-2.p2	NM_001168470|Tmem93|66048|transmembrane protein 93	BC022104|Tmem93|66048|transmembrane protein 93	AK002385|Tmem93|66048|transmembrane protein 93	AK012769|Tmem93|66048|transmembrane protein 93	AK003198|Tmem93|66048|transmembrane protein 93	AK004149|Tmem93|66048|transmembrane protein 93	NM_025318|Tmem93|66048|transmembrane protein 93
mm9_v1_chr12_+_56404242_56404258	0.0458631	NKX3-2.p2	AK031144|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene	AK045434|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr14_-_71028756_71028866	0.0458449	NKX3-2.p2	AK162866|Epb4.9|13829|erythrocyte protein band 4.9
mm9_v1_chr9_+_32031833_32031859	0.0457242	NKX3-2.p2	NM_177379|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr6_-_83003346_83003410	0.0457188	NKX3-2.p2	AK176936|Htra2|64704|HtrA serine peptidase 2	AK178298|Htra2|64704|HtrA serine peptidase 2	AK182973|Htra2|64704|HtrA serine peptidase 2	AK186135|Htra2|64704|HtrA serine peptidase 2	AK188221|Htra2|64704|HtrA serine peptidase 2	AK215600|Htra2|64704|HtrA serine peptidase 2
mm9_v1_chr8_+_114464639_114464646	0.0455544	NKX3-2.p2	BC026798|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm9_v1_chr5_+_34678976_34679138	0.0455423	NKX3-2.p2	AK133924|Rnf4|19822|ring finger protein 4	AK159949|Rnf4|19822|ring finger protein 4	AK090162|Rnf4|19822|ring finger protein 4	NM_011278|Rnf4|19822|ring finger protein 4	AK147057|Rnf4|19822|ring finger protein 4	AK158987|Rnf4|19822|ring finger protein 4	AK019171|Rnf4|19822|ring finger protein 4	AK159296|Rnf4|19822|ring finger protein 4	AK151116|Rnf4|19822|ring finger protein 4	AK159778|Rnf4|19822|ring finger protein 4	AF169300|Rnf4|19822|ring finger protein 4	BC003282|Rnf4|19822|ring finger protein 4	AK145596|Rnf4|19822|ring finger protein 4	AK179891|Rnf4|19822|ring finger protein 4	AK207872|Rnf4|19822|ring finger protein 4	AK219295|Rnf4|19822|ring finger protein 4
mm9_v1_chr13_+_73741384_73741748	0.045474	NKX3-2.p2	AK032295|Clptm1l|218335|CLPTM1-like	AK048357|Clptm1l|218335|CLPTM1-like	AK156203|Clptm1l|218335|CLPTM1-like	AK165939|Clptm1l|218335|CLPTM1-like	BC026562|Clptm1l|218335|CLPTM1-like	NM_146047|Clptm1l|218335|CLPTM1-like
mm9_v1_chr10_+_76978643_76978683	0.0454495	NKX3-2.p2	AK013159|2810425M01Rik|69972|RIKEN cDNA 2810425M01 gene
mm9_v1_chr13_+_105607262_105607338	0.0453783	NKX3-2.p2	BC038302|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK018357|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK020113|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK013737|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK014102|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK013429|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC096661|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	NM_026075|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC027133|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC116993|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC116999|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1
mm9_v1_chr11_-_113063135_113063155	0.0452894	NKX3-2.p2	BC024713|2610035D17Rik|72386|RIKEN cDNA 2610035D17 gene	AK031204|2610035D17Rik|72386|RIKEN cDNA 2610035D17 gene	AK164572|2610035D17Rik|72386|RIKEN cDNA 2610035D17 gene
mm9_v1_chr12_+_74685755_74685838	0.0452311	NKX3-2.p2	AK155951|Prkch|18755|protein kinase C, eta	AK145817|Prkch|18755|protein kinase C, eta	AK076352|Prkch|18755|protein kinase C, eta	AK164044|Prkch|18755|protein kinase C, eta
mm9_v1_chr9_+_7184513_7184587	0.045183	NKX3-2.p2	AK134862|Dcun1d5|76863|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	AK014737|Dcun1d5|76863|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	BC020048|Dcun1d5|76863|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	AK013933|Dcun1d5|76863|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	AK012764|Dcun1d5|76863|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	BC020089|Dcun1d5|76863|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	NM_029775|Dcun1d5|76863|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
mm9_v1_chr16_+_92058498_92058582	0.0451686	NKX3-2.p2	AK165590|Mrps6|121022|mitochondrial ribosomal protein S6	AB049943|Mrps6|121022|mitochondrial ribosomal protein S6	AY061856|Mrps6|121022|mitochondrial ribosomal protein S6	AK144718|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK166374|Mrps6|121022|mitochondrial ribosomal protein S6	AK167304|Mrps6|121022|mitochondrial ribosomal protein S6	NM_017391|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK167316|Mrps6|121022|mitochondrial ribosomal protein S6	BC027271|Mrps6|121022|mitochondrial ribosomal protein S6	NM_080456|Mrps6|121022|mitochondrial ribosomal protein S6
mm9_v1_chr10_-_76188683_76188791	0.0449754	NKX3-2.p2	AK052924|Col6a1|12833|collagen, type VI, alpha 1	NM_009933|Col6a1|12833|collagen, type VI, alpha 1	X66405|Col6a1|12833|collagen, type VI, alpha 1
mm9_v1_chr15_+_94374079_94374090	0.044936	NKX3-2.p2	AK020397|Irak4|266632|interleukin-1 receptor-associated kinase 4	AK029028|Irak4|266632|interleukin-1 receptor-associated kinase 4	NM_029926|Irak4|266632|interleukin-1 receptor-associated kinase 4
mm9_v1_chrX_+_97925185_97925339	0.0448934	NKX3-2.p2	NM_023608|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	AK031379|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	BC038274|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	AB048364|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2
mm9_v1_chr8_+_73222841_73222868	0.0448421	NKX3-2.p2	BC023211|Jund|16478|Jun proto-oncogene related gene d	BC094068|Jund|16478|Jun proto-oncogene related gene d	BC010572|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr9_-_83040061_83040223	0.0448312	NKX3-2.p2	AK002970|Hmgn3|94353|high mobility group nucleosomal binding domain 3	BC005693|Hmgn3|94353|high mobility group nucleosomal binding domain 3	AK003272|Hmgn3|94353|high mobility group nucleosomal binding domain 3	AK153223|Hmgn3|94353|high mobility group nucleosomal binding domain 3	NM_026122|Hmgn3|94353|high mobility group nucleosomal binding domain 3	NM_175074|Hmgn3|94353|high mobility group nucleosomal binding domain 3
mm9_v1_chr6_+_86388364_86388435	0.0448043	NKX3-2.p2	AK047127|C87436|232196|expressed sequence C87436	NM_146170|C87436|232196|expressed sequence C87436	AK170524|C87436|232196|expressed sequence C87436	AK171511|C87436|232196|expressed sequence C87436	BC025632|C87436|232196|expressed sequence C87436
mm9_v1_chr11_+_93905443_93905464	0.0446558	NKX3-2.p2	AK147537|Spag9|70834|sperm associated antigen 9	AK147431|Spag9|70834|sperm associated antigen 9
mm9_v1_chr16_-_60605072_60605085	0.0446514	NKX3-2.p2	U58332|Epha6|13840|Eph receptor A6
mm9_v1_chr1_-_66864031_66864049	0.0445747	NKX3-2.p2	BC141036|1110028C15Rik|68691|RIKEN cDNA 1110028C15 gene
mm9_v1_chr2_+_165818203_165818241	0.0445621	NKX3-2.p2	AK142306|Ncoa3|17979|nuclear receptor coactivator 3
mm9_v1_chr9_-_14185399_14185474	0.0445079	NKX3-2.p2	BC096490|Endod1|71946|endonuclease domain containing 1	AK079741|Endod1|71946|endonuclease domain containing 1	AK078056|Endod1|71946|endonuclease domain containing 1	BC019813|Endod1|71946|endonuclease domain containing 1	AK086102|Endod1|71946|endonuclease domain containing 1
mm9_v1_chr6_-_53018566_53018625	0.0444409	NKX3-2.p2	AK043767|Jazf1|231986|JAZF zinc finger 1	AK050474|Jazf1|231986|JAZF zinc finger 1	NM_173406|Jazf1|231986|JAZF zinc finger 1
mm9_v1_chr14_+_55094936_55095066	0.0444049	NKX3-2.p2	AK090165|Rem2|140743|rad and gem related GTP binding protein 2	NM_080726|Rem2|140743|rad and gem related GTP binding protein 2	AK077317|Rem2|140743|rad and gem related GTP binding protein 2	BC018219|Rem2|140743|rad and gem related GTP binding protein 2
mm9_v1_chr9_+_56712850_56712966	0.0443904	NKX3-2.p2	NM_139001|Cspg4|121021|chondroitin sulfate proteoglycan 4	AF352400|Cspg4|121021|chondroitin sulfate proteoglycan 4
mm9_v1_chr5_+_77020738_77020827	0.044385	NKX3-2.p2	BC062951|Cep135|381644|centrosomal protein 135	NM_199032|Cep135|381644|centrosomal protein 135	AK172988|Cep135|381644|centrosomal protein 135
mm9_v1_chr6_-_55631256_55631256	0.0443122	NKX3-2.p2	AK144360|Neurod6|11922|neurogenic differentiation 6	NM_009717|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr18_-_70301202_70301243	0.0442532	NKX3-2.p2	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr7_+_28390872_28390878	0.0440471	NKX3-2.p2	BC026151|Akt2|11652|thymoma viral proto-oncogene 2	NM_007434|Akt2|11652|thymoma viral proto-oncogene 2
mm9_v1_chr18_-_35091426_35091569	0.0440313	NKX3-2.p2	AK151028|Etf1|225363|eukaryotic translation termination factor 1	AK151710|Etf1|225363|eukaryotic translation termination factor 1	AK152428|Etf1|225363|eukaryotic translation termination factor 1	AK152952|Etf1|225363|eukaryotic translation termination factor 1	AK038771|Etf1|225363|eukaryotic translation termination factor 1
mm9_v1_chr2_+_157105117_157105161	0.0438478	NKX3-2.p2	AK153952|Rpn2|20014|ribophorin II
mm9_v1_chr2_+_170557306_170557456	0.0437303	NKX3-2.p2	BC066822|Dok5|76829|docking protein 5	NM_001163686|Dok5|76829|docking protein 5	NM_029761|Dok5|76829|docking protein 5	AK044148|Dok5|76829|docking protein 5	AF418208|Dok5|76829|docking protein 5
mm9_v1_chr16_+_37580303_37580398	0.0436396	NKX3-2.p2	BC024369|Hgd|15233|homogentisate 1, 2-dioxygenase	BC037628|Hgd|15233|homogentisate 1, 2-dioxygenase	AK050193|Hgd|15233|homogentisate 1, 2-dioxygenase	BC044758|Hgd|15233|homogentisate 1, 2-dioxygenase	AK002584|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chr3_-_104667319_104667422	0.0435165	NKX3-2.p2	AK161370|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1	NM_009797|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1
mm9_v1_chr5_-_23857421_23857489	0.0434388	NKX3-2.p2	AF012868|Kcnh2|16511|potassium voltage-gated channel, subfamily H (eag-related), member 2	NM_013569|Kcnh2|16511|potassium voltage-gated channel, subfamily H (eag-related), member 2
mm9_v1_chr4_-_40800983_40800984	0.0432443	NKX3-2.p2	D00314|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm9_v1_chr9_-_64101043_64101089	0.0432437	NKX3-2.p2	
mm9_v1_chr2_-_32568570_32568641	0.0431144	NKX3-2.p2	AK155733|Cdk9|107951|cyclin-dependent kinase 9 (CDC2-related kinase)
mm9_v1_chrX_+_7476460_7476569	0.0431072	NKX3-2.p2	AK151396|Timm17b|21855|translocase of inner mitochondrial membrane 17b	AK150836|Timm17b|21855|translocase of inner mitochondrial membrane 17b	AK009164|Timm17b|21855|translocase of inner mitochondrial membrane 17b	AK011830|Timm17b|21855|translocase of inner mitochondrial membrane 17b	AK049584|Timm17b|21855|translocase of inner mitochondrial membrane 17b	AK153097|Timm17b|21855|translocase of inner mitochondrial membrane 17b	NM_011591|Timm17b|21855|translocase of inner mitochondrial membrane 17b	AK184288|Timm17b|21855|translocase of inner mitochondrial membrane 17b	BC008275|Timm17b|21855|translocase of inner mitochondrial membrane 17b	AK003204|Timm17b|21855|translocase of inner mitochondrial membrane 17b	AF106621|Timm17b|21855|translocase of inner mitochondrial membrane 17b
mm9_v1_chr4_+_124527985_124528057	0.0429632	NKX3-2.p2	AK153627|Yrdc|230734|yrdC domain containing (E.coli)	NM_153566|Yrdc|230734|yrdC domain containing (E.coli)	BC023823|Yrdc|230734|yrdC domain containing (E.coli)	AY283537|Yrdc|230734|yrdC domain containing (E.coli)
mm9_v1_chr17_+_8994520_8994643	0.0425719	NKX3-2.p2	AK014090|Pde10a|23984|phosphodiesterase 10A	AY360383|Pde10a|23984|phosphodiesterase 10A	NM_011866|Pde10a|23984|phosphodiesterase 10A	AK147690|Pde10a|23984|phosphodiesterase 10A
mm9_v1_chr2_+_121274946_121274963	0.0424463	NKX3-2.p2	NM_011354|Serf2|378702|small EDRK-rich factor 2
mm9_v1_chr5_+_54200858_54200899	0.0424121	NKX3-2.p2	NM_144517|Tbc1d19|67249|TBC1 domain family, member 19	AK083084|Tbc1d19|67249|TBC1 domain family, member 19
mm9_v1_chr2_+_172825609_172825642	0.0423959	NKX3-2.p2	BC060072|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK079383|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	NM_175112|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr10_-_77707321_77707347	0.0423412	NKX3-2.p2	AK154290|Trappc10|216131|trafficking protein particle complex 10
mm9_v1_chr16_-_45408997_45409165	0.0423249	NKX3-2.p2	AF004023|Cd200|17470|CD200 antigen	BC019172|Cd200|17470|CD200 antigen	AK009051|2300009N04Rik|69477|RIKEN cDNA 2300009N04 gene	BC051984|Cd200|17470|CD200 antigen	AK164478|Cd200|17470|CD200 antigen	BC054759|Cd200|17470|CD200 antigen	AK131640|2300009N04Rik|69477|RIKEN cDNA 2300009N04 gene	AK148308|Cd200|17470|CD200 antigen	NM_010818|Cd200|17470|CD200 antigen
mm9_v1_chr14_-_121778143_121778283	0.0423074	NKX3-2.p2	BC004650|Stk24|223255|serine/threonine kinase 24 (STE20 homolog, yeast)
mm9_v1_chrX_+_148613496_148613589	0.0422854	NKX3-2.p2	AK155453|Iqsec2|245666|IQ motif and Sec7 domain 2	NM_001005475|Iqsec2|245666|IQ motif and Sec7 domain 2
mm9_v1_chr4_+_43455122_43455148	0.0422785	NKX3-2.p2	BC099699|Tesk1|21754|testis specific protein kinase 1	NM_011571|Tesk1|21754|testis specific protein kinase 1
mm9_v1_chr3_-_84283349_84283412	0.0422533	NKX3-2.p2	BC137632|Fhdc1|229474|FH2 domain containing 1	AK173244|Fhdc1|229474|FH2 domain containing 1
mm9_v1_chr16_-_20425991_20426058	0.0420679	NKX3-2.p2	AK050565|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr9_-_21043503_21043590	0.041998	NKX3-2.p2	BC023945|Keap1|50868|kelch-like ECH-associated protein 1	AK154430|Keap1|50868|kelch-like ECH-associated protein 1	AK155507|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chr15_-_64143929_64144240	0.04189	NKX3-2.p2	AK122477|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1	AK132979|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1	BC048818|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1	AK147689|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1
mm9_v1_chr2_-_66622823_66622970	0.0417543	NKX3-2.p2	BC145273|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	NM_009135|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	AK142964|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha
mm9_v1_chr4_-_129055102_129055140	0.0417364	NKX3-2.p2	BC017614|Zbtb8a|73680|zinc finger and BTB domain containing 8a
mm9_v1_chr6_-_83456775_83456962	0.0417187	NKX3-2.p2	AK167071|Dguok|27369|deoxyguanosine kinase	U90524|Dguok|27369|deoxyguanosine kinase	AJ133749|Dguok|27369|deoxyguanosine kinase	AY037862|Dguok|27369|deoxyguanosine kinase	BC012647|Dguok|27369|deoxyguanosine kinase	AK035281|Dguok|27369|deoxyguanosine kinase	BC094920|Dguok|27369|deoxyguanosine kinase	NM_001162521|Dguok|27369|deoxyguanosine kinase	NM_013764|Dguok|27369|deoxyguanosine kinase
mm9_v1_chr1_+_179913535_179913568	0.0416543	NKX3-2.p2	AK139440|Gm16432|545391|predicted gene 16432
mm9_v1_chr2_+_58419708_58419797	0.0413467	NKX3-2.p2	AK087904|Upp2|76654|uridine phosphorylase 2	AK161816|Upp2|76654|uridine phosphorylase 2	AK044005|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr7_-_36000343_36000392	0.0413375	NKX3-2.p2	AK149337|Lrp3|435965|low density lipoprotein receptor-related protein 3	NM_001024707|Lrp3|435965|low density lipoprotein receptor-related protein 3
mm9_v1_chr1_+_89652595_89652635	0.0412594	NKX3-2.p2	AK134333|Atg16l1|77040|autophagy-related 16-like 1 (yeast)
mm9_v1_chr1_-_55283189_55283376	0.0411491	NKX3-2.p2	BC026871|Rftn2|74013|raftlin family member 2	AK014318|Rftn2|74013|raftlin family member 2
mm9_v1_chr9_-_21806980_21807039	0.0411135	NKX3-2.p2	BC057069|Ccdc151|77609|coiled-coil domain containing 151	BC051179|Ccdc151|77609|coiled-coil domain containing 151
mm9_v1_chr8_+_123640069_123640092	0.041087	NKX3-2.p2	AK076319|Foxc2|14234|forkhead box C2	AK146887|Foxc2|14234|forkhead box C2	NM_013519|Foxc2|14234|forkhead box C2	X74040|Foxc2|14234|forkhead box C2
mm9_v1_chr6_+_87859720_87859763	0.0410459	NKX3-2.p2	AK192006|Copg|54161|coatomer protein complex, subunit gamma	AK196464|Copg|54161|coatomer protein complex, subunit gamma
mm9_v1_chr8_+_87189015_87189026	0.0409987	NKX3-2.p2	
mm9_v1_chr15_+_89284449_89284497	0.0409951	NKX3-2.p2	AK158968|Mapk8ip2|60597|mitogen-activated protein kinase 8 interacting protein 2
mm9_v1_chr15_+_92427539_92427556	0.0408982	NKX3-2.p2	NM_001164594|Pdzrn4|239618|PDZ domain containing RING finger 4	AK135524|Pdzrn4|239618|PDZ domain containing RING finger 4
mm9_v1_chr4_+_111392665_111392738	0.0408784	NKX3-2.p2	AK153098|Spata6|67946|spermatogenesis associated 6
mm9_v1_chr7_+_30093030_30093065	0.0408684	NKX3-2.p2	AK142419|Dpf1|29861|D4, zinc and double PHD fingers family 1	U48239|Dpf1|29861|D4, zinc and double PHD fingers family 1
mm9_v1_chr18_-_36675458_36675463	0.0407673	NKX3-2.p2	AK164309|Hbegf|15200|heparin-binding EGF-like growth factor	NM_010415|Hbegf|15200|heparin-binding EGF-like growth factor
mm9_v1_chr9_-_66880619_66880631	0.0406541	NKX3-2.p2	AK190148|Tpm1|22003|tropomyosin 1, alpha	AK083087|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chr13_+_58910051_58910106	0.0406348	NKX3-2.p2	AB377224|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	AB377225|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	AK009606|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	M33385|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr12_+_31269290_31269335	0.0405835	NKX3-2.p2	AK166323|Tmem18|211986|transmembrane protein 18	NM_172049|Tmem18|211986|transmembrane protein 18	AK133493|Tmem18|211986|transmembrane protein 18	AK160817|Tmem18|211986|transmembrane protein 18	AK170496|Tmem18|211986|transmembrane protein 18	BC024093|Tmem18|211986|transmembrane protein 18
mm9_v1_chr4_+_147822690_147822721	0.0404609	NKX3-2.p2	NM_020009|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	AK172584|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	AF152838|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	AK036004|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)
mm9_v1_chr14_+_49686169_49686492	0.0403955	NKX3-2.p2	BC023094|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	NM_144535|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK028927|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK041400|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK154166|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK016540|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK051372|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK036465|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK030928|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK036454|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK042544|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK170232|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK164148|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK211895|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing
mm9_v1_chr10_-_92773579_92773713	0.0403173	NKX3-2.p2	AK052546|Elk3|13713|ELK3, member of ETS oncogene family	S82864|Elk3|13713|ELK3, member of ETS oncogene family	AK133847|Elk3|13713|ELK3, member of ETS oncogene family	BC053402|Elk3|13713|ELK3, member of ETS oncogene family	BC055735|Elk3|13713|ELK3, member of ETS oncogene family	AK088129|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr7_+_4971977_4971977	0.0402851	NKX3-2.p2	AK154737|Zfp865|319748|zinc finger protein 865	NM_001033383|Zfp865|319748|zinc finger protein 865
mm9_v1_chr11_+_77908168_77908192	0.040197	NKX3-2.p2	AK085728|BC017647|216971|cDNA sequence BC017647	NM_145430|BC017647|216971|cDNA sequence BC017647	AK047860|BC017647|216971|cDNA sequence BC017647	AK140562|BC017647|216971|cDNA sequence BC017647
mm9_v1_chr8_+_41509109_41509241	0.0401497	NKX3-2.p2	AK030662|Zdhhc2|70546|zinc finger, DHHC domain containing 2	NM_178395|Zdhhc2|70546|zinc finger, DHHC domain containing 2	AK136296|Zdhhc2|70546|zinc finger, DHHC domain containing 2	AK046533|Zdhhc2|70546|zinc finger, DHHC domain containing 2	AK044652|Zdhhc2|70546|zinc finger, DHHC domain containing 2	BC117761|Zdhhc2|70546|zinc finger, DHHC domain containing 2	BC127156|Zdhhc2|70546|zinc finger, DHHC domain containing 2	AK018284|Zdhhc2|70546|zinc finger, DHHC domain containing 2
mm9_v1_chr17_-_37451325_37451381	0.0399938	NKX3-2.p2	BC111097|Olfr100|404307|olfactory receptor 100	BC127233|Olfr100|404307|olfactory receptor 100	BC127234|Olfr100|404307|olfactory receptor 100	NM_207673|Olfr100|404307|olfactory receptor 100	BC139114|Olfr102|258218|olfactory receptor 102	BC139115|Olfr102|258218|olfactory receptor 102	NM_001011721|Olfr102|258218|olfactory receptor 102
mm9_v1_chr6_+_88053362_88053458	0.0399542	NKX3-2.p2	AK213986|Rpn1|103963|ribophorin I
mm9_v1_chr12_-_82695944_82695966	0.0398273	NKX3-2.p2	BC013096|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	NM_027213|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK171784|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr9_-_54349409_54349432	0.0397383	NKX3-2.p2	AK170274|Dmxl2|235380|Dmx-like 2	AK048831|Dmxl2|235380|Dmx-like 2	AK053672|Dmxl2|235380|Dmx-like 2	NM_172771|Dmxl2|235380|Dmx-like 2
mm9_v1_chr2_-_155755765_155755804	0.0396883	NKX3-2.p2	AK011953|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK054294|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK169413|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK077323|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AF253516|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK010376|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK011152|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK019425|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)
mm9_v1_chr11_+_16951805_16951896	0.0396004	NKX3-2.p2	AK087090|Cnrip1|380686|cannabinoid receptor interacting protein 1	AK148349|Cnrip1|380686|cannabinoid receptor interacting protein 1	AK171947|Cnrip1|380686|cannabinoid receptor interacting protein 1
mm9_v1_chr5_-_150438750_150438824	0.0393585	NKX3-2.p2	BC018378|Hsph1|15505|heat shock 105kDa/110kDa protein 1	D67017|Hsph1|15505|heat shock 105kDa/110kDa protein 1	L40406|Hsph1|15505|heat shock 105kDa/110kDa protein 1	AK146697|Hsph1|15505|heat shock 105kDa/110kDa protein 1
mm9_v1_chr7_+_148748077_148748100	0.0393444	NKX3-2.p2	NM_007459|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chrX_-_147531030_147531085	0.0392578	NKX3-2.p2	BC037444|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC025008|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	AK044504|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC049668|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_001164578|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_175146|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
mm9_v1_chr19_+_55390850_55390853	0.039206	NKX3-2.p2	AK004751|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
mm9_v1_chr9_-_114842996_114843065	0.0391992	NKX3-2.p2	AK050572|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like	AK172886|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like
mm9_v1_chr17_+_33980039_33980123	0.0391158	NKX3-2.p2	AK140204|Cd320|54219|CD320 antigen	AK021187|Cd320|54219|CD320 antigen	BC026888|Cd320|54219|CD320 antigen
mm9_v1_chr2_+_127073631_127073743	0.0390725	NKX3-2.p2	AK165880|Tmem127|69470|transmembrane protein 127	AK030324|Tmem127|69470|transmembrane protein 127	BC049832|Tmem127|69470|transmembrane protein 127	NM_175145|Tmem127|69470|transmembrane protein 127	AK050216|Tmem127|69470|transmembrane protein 127
mm9_v1_chr5_-_22056086_22056211	0.0390168	NKX3-2.p2	AK166537|Orc5|26429|origin recognition complex, subunit 5	AK169683|Orc5|26429|origin recognition complex, subunit 5	AJ007360|Orc5|26429|origin recognition complex, subunit 5	AK144983|Orc5|26429|origin recognition complex, subunit 5	NM_011959|Orc5|26429|origin recognition complex, subunit 5	AK165912|Orc5|26429|origin recognition complex, subunit 5	BC006927|Orc5|26429|origin recognition complex, subunit 5	AK084683|Orc5|26429|origin recognition complex, subunit 5
mm9_v1_chr13_-_56236910_56236913	0.0387682	NKX3-2.p2	NM_001159513|H2afy|26914|H2A histone family, member Y	NM_001159514|H2afy|26914|H2A histone family, member Y	NM_001159515|H2afy|26914|H2A histone family, member Y	NM_012015|H2afy|26914|H2A histone family, member Y
mm9_v1_chr7_-_19857195_19857222	0.0387315	NKX3-2.p2	NM_009499|Vasp|22323|vasodilator-stimulated phosphoprotein
mm9_v1_chr13_+_34967479_34967496	0.0387075	NKX3-2.p2	AK021274|Prpf4b|19134|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	AK083926|Prpf4b|19134|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	AK020579|Prpf4b|19134|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm9_v1_chr16_+_36935029_36935139	0.0385439	NKX3-2.p2	NM_008225|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	AK040049|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	AK088723|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	BC007469|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	X84797|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	D42120|Hcls1|15163|hematopoietic cell specific Lyn substrate 1
mm9_v1_chr10_-_31165691_31165726	0.0385425	NKX3-2.p2	AF004428|Tpd52l1|21987|tumor protein D52-like 1	NM_009413|Tpd52l1|21987|tumor protein D52-like 1
mm9_v1_chr14_-_104243474_104243491	0.0385194	NKX3-2.p2	AK082103|Ednrb|13618|endothelin receptor type B
mm9_v1_chr9_+_114597854_114597998	0.0384977	NKX3-2.p2	AK082950|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	AK159702|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	BC023347|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	NM_146229|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1
mm9_v1_chr7_+_25682507_25682533	0.0384323	NKX3-2.p2	AK143605|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)	NM_007655|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)	X13450|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)	BC027633|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)
mm9_v1_chr3_-_146162716_146162716	0.038349	NKX3-2.p2	NM_027617|Spata1|70951|spermatogenesis associated 1
mm9_v1_chr3_-_90237092_90237456	0.0380275	NKX3-2.p2	BC055344|Ints3|229543|integrator complex subunit 3	AK033296|Ints3|229543|integrator complex subunit 3	AK146699|Ints3|229543|integrator complex subunit 3
mm9_v1_chr9_+_113840051_113840064	0.0379099	NKX3-2.p2	AK143282|Ubp1|22221|upstream binding protein 1	NM_001083319|Ubp1|22221|upstream binding protein 1	NM_013699|Ubp1|22221|upstream binding protein 1
mm9_v1_chr9_+_107465568_107465700	0.0379051	NKX3-2.p2	AK082684|Tusc2|80385|tumor suppressor candidate 2	BC048477|Tusc2|80385|tumor suppressor candidate 2	NM_019742|Tusc2|80385|tumor suppressor candidate 2	AK004430|Tusc2|80385|tumor suppressor candidate 2	AF123387|Tusc2|80385|tumor suppressor candidate 2
mm9_v1_chr10_+_110601745_110601988	0.0378887	NKX3-2.p2	AK037158|Osbpl8|237542|oxysterol binding protein-like 8	AK050244|Osbpl8|237542|oxysterol binding protein-like 8	NM_001003717|Osbpl8|237542|oxysterol binding protein-like 8	NM_175489|Osbpl8|237542|oxysterol binding protein-like 8
mm9_v1_chr7_-_51807815_51807956	0.0378029	NKX3-2.p2	
mm9_v1_chr3_+_80841086_80841191	0.0377297	NKX3-2.p2	AK052947|Pdgfc|54635|platelet-derived growth factor, C polypeptide	BC029099|Pdgfc|54635|platelet-derived growth factor, C polypeptide	AF117608|Pdgfc|54635|platelet-derived growth factor, C polypeptide	BC037696|Pdgfc|54635|platelet-derived growth factor, C polypeptide
mm9_v1_chr7_-_26531381_26531435	0.0377063	NKX3-2.p2	BC027844|Hnrnpul1|232989|heterogeneous nuclear ribonucleoprotein U-like 1	AK203240|Hnrnpul1|232989|heterogeneous nuclear ribonucleoprotein U-like 1
mm9_v1_chr11_+_98219687_98219740	0.0376727	NKX3-2.p2	NM_021547|Stard3|59045|START domain containing 3	X82457|Stard3|59045|START domain containing 3	AK041538|Stard3|59045|START domain containing 3	AK150166|Stard3|59045|START domain containing 3	AK150254|Stard3|59045|START domain containing 3
mm9_v1_chr7_-_133726668_133726903	0.0375784	NKX3-2.p2	U92811|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U47106|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC060306|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U68064|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	AK078976|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	NM_009907|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC080759|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC058753|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chr19_+_43514902_43514932	0.0375784	NKX3-2.p2	NM_031396|Cnnm1|83674|cyclin M1
mm9_v1_chr2_-_162486634_162486773	0.0375204	NKX3-2.p2	AY026861|Ptprt|19281|protein tyrosine phosphatase, receptor type, T	AY026862|Ptprt|19281|protein tyrosine phosphatase, receptor type, T	AY026863|Ptprt|19281|protein tyrosine phosphatase, receptor type, T
mm9_v1_chr7_+_6336027_6336121	0.0373688	NKX3-2.p2	NM_175247|Zfp28|22690|zinc finger protein 28	AK048530|Zfp28|22690|zinc finger protein 28	AK028202|Zfp28|22690|zinc finger protein 28	BC062116|Zfp28|22690|zinc finger protein 28	AK173170|Zfp28|22690|zinc finger protein 28	AY528713|Zfp28|22690|zinc finger protein 28
mm9_v1_chr19_-_44144244_44144286	0.0372698	NKX3-2.p2	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr16_+_31428833_31428879	0.0372018	NKX3-2.p2	AK146321|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	AK145711|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_001122683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	AK146962|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chrX_-_94572488_94572554	0.0370134	NKX3-2.p2	BC106845|Eda2r|245527|ectodysplasin A2 receptor	AK034909|Eda2r|245527|ectodysplasin A2 receptor	AK080072|Eda2r|245527|ectodysplasin A2 receptor	NM_001161432|Eda2r|245527|ectodysplasin A2 receptor	NM_001161433|Eda2r|245527|ectodysplasin A2 receptor	NM_175540|Eda2r|245527|ectodysplasin A2 receptor	AK049134|Eda2r|245527|ectodysplasin A2 receptor
mm9_v1_chr11_-_59104252_59104253	0.0369804	NKX3-2.p2	NM_009522|Wnt3a|22416|wingless-related MMTV integration site 3A	X56842|Wnt3a|22416|wingless-related MMTV integration site 3A
mm9_v1_chr2_+_49474840_49474940	0.0368621	NKX3-2.p2	AK158884|Kif5c|16574|kinesin family member 5C	AB093244|Kif5c|16574|kinesin family member 5C
mm9_v1_chr1_+_89110472_89110608	0.0367439	NKX3-2.p2	AK032965|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	NM_001039170|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	NM_023314|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AK018516|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AK017221|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	NM_001039169|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	BC049077|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	U01137|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AK138055|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AK150495|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	BC045153|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2	AF068116|Eif4e2|26987|eukaryotic translation initiation factor 4E member 2
mm9_v1_chr17_+_8138805_8138869	0.0367027	NKX3-2.p2	BC054439|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	BC085294|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	AK007979|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)
mm9_v1_chr12_+_56499902_56499913	0.0366077	NKX3-2.p2	AF060087|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6
mm9_v1_chr2_-_32279522_32279542	0.0365791	NKX3-2.p2	BC022114|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	BC019978|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr3_+_89006938_89006939	0.0365682	NKX3-2.p2	M24119|Gba|14466|glucosidase, beta, acid
mm9_v1_chr11_-_29072713_29072819	0.0365616	NKX3-2.p2	BC049150|A630052C17Rik|320757|RIKEN cDNA A630052C17 gene	BC037626|A630052C17Rik|320757|RIKEN cDNA A630052C17 gene	BC059020|A630052C17Rik|320757|RIKEN cDNA A630052C17 gene	AK083953|A630052C17Rik|320757|RIKEN cDNA A630052C17 gene
mm9_v1_chr9_+_107483603_107483637	0.0363724	NKX3-2.p2	BC018457|Hyal3|109685|hyaluronoglucosaminidase 3	NM_178020|Hyal3|109685|hyaluronoglucosaminidase 3	AY048681|Hyal3|109685|hyaluronoglucosaminidase 3
mm9_v1_chr7_-_108043203_108043229	0.0363264	NKX3-2.p2	AK122250|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr13_+_34967499_34967514	0.0363259	NKX3-2.p2	AB516304|Prpf4b|19134|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm9_v1_chr10_-_92773778_92773948	0.0362993	NKX3-2.p2	Z32815|Elk3|13713|ELK3, member of ETS oncogene family	L19953|Elk3|13713|ELK3, member of ETS oncogene family	BC005686|Elk3|13713|ELK3, member of ETS oncogene family	NM_013508|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr19_+_5912952_5912986	0.0362909	NKX3-2.p2	
mm9_v1_chr6_+_28430311_28430460	0.0362236	NKX3-2.p2	AK133837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	NM_019776|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK167576|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK159837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK088028|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK161591|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AB021491|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK034914|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK162432|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	BC007126|Snd1|56463|staphylococcal nuclease and tudor domain containing 1
mm9_v1_chr8_-_82235513_82235596	0.0362031	NKX3-2.p2	U90446|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK167704|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	BC005422|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK144711|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK133748|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK134738|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK147151|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK167370|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK167130|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1
mm9_v1_chr2_+_19831406_19831453	0.0361972	NKX3-2.p2	AK052020|Etl4|208618|enhancer trap locus 4
mm9_v1_chr16_+_22920486_22920556	0.0361724	NKX3-2.p2	AY138460|Fetub|59083|fetuin beta	BC018341|Fetub|59083|fetuin beta
mm9_v1_chr19_-_56896633_56896705	0.0361712	NKX3-2.p2	BC064039|A630007B06Rik|213993|RIKEN cDNA A630007B06 gene	AK041398|A630007B06Rik|213993|RIKEN cDNA A630007B06 gene	AK054204|A630007B06Rik|213993|RIKEN cDNA A630007B06 gene
mm9_v1_chr7_-_134027930_134028177	0.0360241	NKX3-2.p2	BC077714|Taok2|381921|TAO kinase 2	BC075676|Taok2|381921|TAO kinase 2
mm9_v1_chr15_-_103278889_103278900	0.0359387	NKX3-2.p2	BC048502|BC048502|223927|cDNA sequence BC048502	NM_177631|BC048502|223927|cDNA sequence BC048502	AK131692|BC048502|223927|cDNA sequence BC048502
mm9_v1_chr8_+_72332573_72332679	0.035891	NKX3-2.p2	AK043883|Gmip|78816|Gem-interacting protein	BC057037|Gmip|78816|Gem-interacting protein	NM_198101|Gmip|78816|Gem-interacting protein	AK082337|Gmip|78816|Gem-interacting protein	AK172438|Gmip|78816|Gem-interacting protein	BC060628|Gmip|78816|Gem-interacting protein	AK137177|Gmip|78816|Gem-interacting protein	AK052221|Gmip|78816|Gem-interacting protein
mm9_v1_chr1_+_63319842_63319842	0.0357904	NKX3-2.p2	AK015271|Zdbf2|73884|zinc finger, DBF-type containing 2	AK132808|Zdbf2|73884|zinc finger, DBF-type containing 2	NM_028673|Zdbf2|73884|zinc finger, DBF-type containing 2
mm9_v1_chr16_-_88290458_88290613	0.0357827	NKX3-2.p2	AK044420|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK044250|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK043737|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK048634|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK043542|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK133667|Grik1|14805|glutamate receptor, ionotropic, kainate 1	X66118|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK042635|Grik1|14805|glutamate receptor, ionotropic, kainate 1	NM_010348|Grik1|14805|glutamate receptor, ionotropic, kainate 1	NM_146072|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK046122|Grik1|14805|glutamate receptor, ionotropic, kainate 1	AK148296|Grik1|14805|glutamate receptor, ionotropic, kainate 1
mm9_v1_chr9_-_21397188_21397310	0.0357246	NKX3-2.p2	BC002282|Yipf2|74766|Yip1 domain family, member 2	NM_138303|Yipf2|74766|Yip1 domain family, member 2	BC003289|Yipf2|74766|Yip1 domain family, member 2	AK033705|Yipf2|74766|Yip1 domain family, member 2	AK133631|Yipf2|74766|Yip1 domain family, member 2	AK004959|Yipf2|74766|Yip1 domain family, member 2
mm9_v1_chr15_-_3253525_3253525	0.0356955	NKX3-2.p2	NM_001166063|Ccdc152|100039139|coiled-coil domain containing 152
mm9_v1_chr7_+_51565563_51565633	0.0356487	NKX3-2.p2	NM_001034115|Shank1|243961|SH3/ankyrin domain gene 1
mm9_v1_chr2_+_24910023_24910120	0.0354735	NKX3-2.p2	AJ278902|Nelf|56876|nasal embryonic LHRH factor
mm9_v1_chr11_-_4749311_4749550	0.0354162	NKX3-2.p2	L28176|Nf2|18016|neurofibromatosis 2	AK045998|Nf2|18016|neurofibromatosis 2	BC005442|Nf2|18016|neurofibromatosis 2	NM_010898|Nf2|18016|neurofibromatosis 2	X74671|Nf2|18016|neurofibromatosis 2
mm9_v1_chr7_-_88092388_88092468	0.0354124	NKX3-2.p2	BC010484|Sec11a|56529|SEC11 homolog A (S. cerevisiae)	AK007449|Sec11a|56529|SEC11 homolog A (S. cerevisiae)	AB025405|Sec11a|56529|SEC11 homolog A (S. cerevisiae)	NM_019951|Sec11a|56529|SEC11 homolog A (S. cerevisiae)	AK169560|Sec11a|56529|SEC11 homolog A (S. cerevisiae)
mm9_v1_chr4_-_126991216_126991282	0.0353781	NKX3-2.p2	BC056613|Gja4|14612|gap junction protein, alpha 4	AF216832|Gja4|14612|gap junction protein, alpha 4	NM_008120|Gja4|14612|gap junction protein, alpha 4	AK143024|Gja4|14612|gap junction protein, alpha 4
mm9_v1_chr10_-_32609590_32609720	0.0353205	NKX3-2.p2	BC141063|Nkain2|432450|Na+/K+ transporting ATPase interacting 2	DQ065606|Nkain2|432450|Na+/K+ transporting ATPase interacting 2	DQ065607|Nkain2|432450|Na+/K+ transporting ATPase interacting 2	EF058049|Nkain2|432450|Na+/K+ transporting ATPase interacting 2	NM_001013411|Nkain2|432450|Na+/K+ transporting ATPase interacting 2	NM_001025286|Nkain2|432450|Na+/K+ transporting ATPase interacting 2
mm9_v1_chr1_-_33871349_33871443	0.035118	NKX3-2.p2	AK015797|Zfp451|98403|zinc finger protein 451
mm9_v1_chr6_-_115626274_115626345	0.0349569	NKX3-2.p2	
mm9_v1_chr2_+_167328944_167328984	0.0349418	NKX3-2.p2	AK163062|Rnf114|81018|ring finger protein 114	BC054416|Rnf114|81018|ring finger protein 114	BC023125|Rnf114|81018|ring finger protein 114	AK139030|Rnf114|81018|ring finger protein 114	AK153452|Rnf114|81018|ring finger protein 114	AK159818|Rnf114|81018|ring finger protein 114	BC043446|Rnf114|81018|ring finger protein 114
mm9_v1_chr3_-_116126853_116126921	0.0349256	NKX3-2.p2	AK048250|Cdc14a|229776|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK032515|Cdc14a|229776|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	BC072644|Cdc14a|229776|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
mm9_v1_chr1_+_187186933_187187054	0.0348078	NKX3-2.p2	AK088974|Eprs|107508|glutamyl-prolyl-tRNA synthetase	AK160986|Eprs|107508|glutamyl-prolyl-tRNA synthetase	NM_029735|Eprs|107508|glutamyl-prolyl-tRNA synthetase	BC040802|Eprs|107508|glutamyl-prolyl-tRNA synthetase	AK010734|Eprs|107508|glutamyl-prolyl-tRNA synthetase	AK147995|Eprs|107508|glutamyl-prolyl-tRNA synthetase	AK148463|Eprs|107508|glutamyl-prolyl-tRNA synthetase	BC058337|Eprs|107508|glutamyl-prolyl-tRNA synthetase	BC141049|Eprs|107508|glutamyl-prolyl-tRNA synthetase
mm9_v1_chr5_-_51945054_51945159	0.0347633	NKX3-2.p2	BC066868|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AB061324|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AF049330|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK143753|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK138668|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	NM_008904|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr8_+_87604829_87604904	0.0345718	NKX3-2.p2	AK010893|BC056474|414077|cDNA sequence BC056474	BC089623|BC056474|414077|cDNA sequence BC056474	NM_001001493|BC056474|414077|cDNA sequence BC056474	BC024937|BC056474|414077|cDNA sequence BC056474	BC091742|BC056474|414077|cDNA sequence BC056474	BC056474|BC056474|414077|cDNA sequence BC056474
mm9_v1_chr13_-_55122556_55122626	0.0345582	NKX3-2.p2	AK149992|Hk3|212032|hexokinase 3	BC028480|Hk3|212032|hexokinase 3	AK149651|Hk3|212032|hexokinase 3	AK159857|Hk3|212032|hexokinase 3	AK170813|Hk3|212032|hexokinase 3	AK171248|Hk3|212032|hexokinase 3	AK140444|Hk3|212032|hexokinase 3	AK163658|Hk3|212032|hexokinase 3
mm9_v1_chr19_+_10463540_10463619	0.0345486	NKX3-2.p2	NM_018801|Syt7|54525|synaptotagmin VII	NM_173067|Syt7|54525|synaptotagmin VII	NM_173068|Syt7|54525|synaptotagmin VII	AK080850|Syt7|54525|synaptotagmin VII
mm9_v1_chr15_+_99223377_99223451	0.0344814	NKX3-2.p2	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr14_-_60870184_60870343	0.0344639	NKX3-2.p2	AK146477|Nupl1|71844|nucleoporin like 1	NM_170591|Nupl1|71844|nucleoporin like 1	AK133721|Nupl1|71844|nucleoporin like 1	AK163792|Nupl1|71844|nucleoporin like 1	BC026743|Nupl1|71844|nucleoporin like 1	AK129134|Nupl1|71844|nucleoporin like 1	AK078279|Nupl1|71844|nucleoporin like 1	AK029688|Nupl1|71844|nucleoporin like 1	AK086412|Nupl1|71844|nucleoporin like 1	AK006062|Nupl1|71844|nucleoporin like 1	AK139895|Nupl1|71844|nucleoporin like 1
mm9_v1_chr14_-_78488780_78488813	0.0344528	NKX3-2.p2	BC120488|AU021034|219170|expressed sequence AU021034	BC120490|AU021034|219170|expressed sequence AU021034	AK047611|AU021034|219170|expressed sequence AU021034	AK034132|AU021034|219170|expressed sequence AU021034	NM_177629|AU021034|219170|expressed sequence AU021034
mm9_v1_chr6_+_124999940_124999944	0.034433	NKX3-2.p2	D17574|Acrbp|54137|proacrosin binding protein	NM_001127340|Acrbp|54137|proacrosin binding protein	NM_016845|Acrbp|54137|proacrosin binding protein
mm9_v1_chr11_+_75281563_75281593	0.0343656	NKX3-2.p2	BC021945|Tlcd2|380712|TLC domain containing 2	NM_027249|Tlcd2|380712|TLC domain containing 2	AK008522|Tlcd2|380712|TLC domain containing 2
mm9_v1_chr8_-_107871763_107871818	0.0343541	NKX3-2.p2	AB041045|Fhod1|234686|formin homology 2 domain containing 1	BC017144|Fhod1|234686|formin homology 2 domain containing 1
mm9_v1_chr8_-_26707934_26708016	0.0343491	NKX3-2.p2	AK076546|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	BC055685|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	NM_173012|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK041725|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK031563|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK034050|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK050943|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK163507|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2
mm9_v1_chr11_+_70577932_70578003	0.0340974	NKX3-2.p2	AK045753|Zfp3|193043|zinc finger protein 3	NM_177565|Zfp3|193043|zinc finger protein 3	BC096463|Zfp3|193043|zinc finger protein 3
mm9_v1_chr12_+_113384460_113384575	0.0340821	NKX3-2.p2	GQ489027|Kif26a|668303|kinesin family member 26A
mm9_v1_chr5_+_93112460_93112460	0.0340781	NKX3-2.p2	AF199421|Shroom3|27428|shroom family member 3	NM_015756|Shroom3|27428|shroom family member 3
mm9_v1_chr10_+_127896244_127896376	0.0340386	NKX3-2.p2	NM_001114096|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_001114097|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_198160|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC058720|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK089461|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK170530|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK146971|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC040363|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm9_v1_chr4_-_126645129_126645179	0.0338664	NKX3-2.p2	AK148366|Zmym4|67785|zinc finger, MYM-type 4	NM_001114399|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr14_-_64162562_64162594	0.0337834	NKX3-2.p2	AK152320|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr19_+_4711220_4711230	0.0337677	NKX3-2.p2	BC079860|Spnb3|20743|spectrin beta 3	NM_021287|Spnb3|20743|spectrin beta 3
mm9_v1_chr19_+_20676453_20676504	0.03375	NKX3-2.p2	M74570|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC044729|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC054386|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	NM_013467|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC035322|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	S75713|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1
mm9_v1_chr15_+_91958558_91958558	0.0336925	NKX3-2.p2	NM_007727|Cntn1|12805|contactin 1
mm9_v1_chr3_-_87572823_87572881	0.0336103	NKX3-2.p2	BC042490|Pear1|73182|platelet endothelial aggregation receptor 1	AF440279|Pear1|73182|platelet endothelial aggregation receptor 1	AK042308|Pear1|73182|platelet endothelial aggregation receptor 1	AK053551|Pear1|73182|platelet endothelial aggregation receptor 1	AK141082|Pear1|73182|platelet endothelial aggregation receptor 1	AK161049|Pear1|73182|platelet endothelial aggregation receptor 1	NM_001032413|Pear1|73182|platelet endothelial aggregation receptor 1	NM_001032414|Pear1|73182|platelet endothelial aggregation receptor 1	NM_028460|Pear1|73182|platelet endothelial aggregation receptor 1	NM_152799|Pear1|73182|platelet endothelial aggregation receptor 1	AK014179|Pear1|73182|platelet endothelial aggregation receptor 1
mm9_v1_chr11_-_23795075_23795194	0.033533	NKX3-2.p2	DQ103505|Papolg|216578|poly(A) polymerase gamma
mm9_v1_chr11_-_96902657_96902728	0.0334995	NKX3-2.p2	AK005668|Lrrc46|69297|leucine rich repeat containing 46	BC022723|Lrrc46|69297|leucine rich repeat containing 46	NM_027026|Lrrc46|69297|leucine rich repeat containing 46	AK158517|Lrrc46|69297|leucine rich repeat containing 46
mm9_v1_chr7_-_30066910_30067008	0.0334817	NKX3-2.p2	AF099016|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099019|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099020|Spint2|20733|serine protease inhibitor, Kunitz type 2	BC003431|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_001082548|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_011464|Spint2|20733|serine protease inhibitor, Kunitz type 2
mm9_v1_chr5_-_125821418_125821488	0.0333766	NKX3-2.p2	AK169906|Scarb1|20778|scavenger receptor class B, member 1	AK171602|Scarb1|20778|scavenger receptor class B, member 1	BC004656|Scarb1|20778|scavenger receptor class B, member 1	NM_016741|Scarb1|20778|scavenger receptor class B, member 1	AK028191|Scarb1|20778|scavenger receptor class B, member 1	AK154933|Scarb1|20778|scavenger receptor class B, member 1
mm9_v1_chr9_-_45714409_45714473	0.0333047	NKX3-2.p2	BC094247|Rnf214|235315|ring finger protein 214	AK033867|Rnf214|235315|ring finger protein 214
mm9_v1_chr11_-_116167956_116168087	0.0332139	NKX3-2.p2	AF014461|Exoc7|53413|exocyst complex component 7	AK140450|Exoc7|53413|exocyst complex component 7	BC053710|Exoc7|53413|exocyst complex component 7	BC028927|Exoc7|53413|exocyst complex component 7	AK167769|Exoc7|53413|exocyst complex component 7	AK162868|Exoc7|53413|exocyst complex component 7	AK169928|Exoc7|53413|exocyst complex component 7	AK087601|Exoc7|53413|exocyst complex component 7	NM_001162872|Exoc7|53413|exocyst complex component 7	NM_016857|Exoc7|53413|exocyst complex component 7
mm9_v1_chr7_-_89079168_89079313	0.0331832	NKX3-2.p2	AK014849|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK044858|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK051401|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK135495|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr3_+_30501527_30501587	0.033132	NKX3-2.p2	AK013445|Mynn|80732|myoneurin	AK030898|Mynn|80732|myoneurin	AK147959|Mynn|80732|myoneurin	AK136107|Mynn|80732|myoneurin	AK014315|Mynn|80732|myoneurin	AK019238|Mynn|80732|myoneurin	AK163261|Mynn|80732|myoneurin	AK163264|Mynn|80732|myoneurin	BC007477|Mynn|80732|myoneurin	AK029657|Mynn|80732|myoneurin
mm9_v1_chr13_-_101603189_101603199	0.0331087	NKX3-2.p2	AK166006|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5
mm9_v1_chr17_-_35309483_35309575	0.033104	NKX3-2.p2	CT010265|Aif1|11629|allograft inflammatory factor 1	CT010385|Aif1|11629|allograft inflammatory factor 1	AB013745|Aif1|11629|allograft inflammatory factor 1	AF074959|Aif1|11629|allograft inflammatory factor 1	D86382|Aif1|11629|allograft inflammatory factor 1
mm9_v1_chr5_-_23950969_23951097	0.0330931	NKX3-2.p2	BC013547|Fastk|66587|Fas-activated serine/threonine kinase	AK052667|Fastk|66587|Fas-activated serine/threonine kinase	AK002552|Fastk|66587|Fas-activated serine/threonine kinase	AK038596|Fastk|66587|Fas-activated serine/threonine kinase	AK151859|Fastk|66587|Fas-activated serine/threonine kinase	AK159751|Fastk|66587|Fas-activated serine/threonine kinase	AK166508|Fastk|66587|Fas-activated serine/threonine kinase	AK167346|Fastk|66587|Fas-activated serine/threonine kinase	AK139374|Fastk|66587|Fas-activated serine/threonine kinase	AK164317|Fastk|66587|Fas-activated serine/threonine kinase	AK152369|Fastk|66587|Fas-activated serine/threonine kinase	NM_023229|Fastk|66587|Fas-activated serine/threonine kinase
mm9_v1_chr16_+_52031661_52031695	0.0330824	NKX3-2.p2	NM_001033238|Cblb|208650|Casitas B-lineage lymphoma b	AK147367|Cblb|208650|Casitas B-lineage lymphoma b
mm9_v1_chr11_+_114588725_114588725	0.0330596	NKX3-2.p2	NM_001034878|Dnaic2|432611|dynein, axonemal, intermediate chain 2
mm9_v1_chr11_+_16951911_16951955	0.0328788	NKX3-2.p2	AK019934|Cnrip1|380686|cannabinoid receptor interacting protein 1	BC087946|Cnrip1|380686|cannabinoid receptor interacting protein 1	NM_029861|Cnrip1|380686|cannabinoid receptor interacting protein 1
mm9_v1_chr16_+_13672078_13672141	0.0326941	NKX3-2.p2	AK031567|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK013874|Bfar|67118|bifunctional apoptosis regulator	BC027221|Bfar|67118|bifunctional apoptosis regulator	AK012939|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK028592|Bfar|67118|bifunctional apoptosis regulator	NM_025653|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene
mm9_v1_chr6_+_34426288_34426319	0.0326136	NKX3-2.p2	AK006315|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK043412|Bpgm|12183|2,3-bisphosphoglycerate mutase
mm9_v1_chr11_-_101278690_101278747	0.0323643	NKX3-2.p2	AK168281|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	AK136332|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	AK078016|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	BC005711|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	NM_144829|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1
mm9_v1_chr15_+_34236408_34236565	0.0322282	NKX3-2.p2	AK035102|Matn2|17181|matrilin 2	NM_016762|Matn2|17181|matrilin 2	AK083151|Matn2|17181|matrilin 2	AK138211|Matn2|17181|matrilin 2	U69262|Matn2|17181|matrilin 2	AK163818|Matn2|17181|matrilin 2	AK081339|Matn2|17181|matrilin 2	BC092298|Matn2|17181|matrilin 2	BC005429|Matn2|17181|matrilin 2
mm9_v1_chr19_+_12040391_12040437	0.0321405	NKX3-2.p2	BC107327|Osbp|76303|oxysterol binding protein	BC107328|Osbp|76303|oxysterol binding protein
mm9_v1_chr11_+_86922732_86922770	0.0321228	NKX3-2.p2	BC117001|Fam33a|66140|family with sequence similarity 33, member A	BC119167|Fam33a|66140|family with sequence similarity 33, member A	AK003196|Fam33a|66140|family with sequence similarity 33, member A	AK153219|Fam33a|66140|family with sequence similarity 33, member A	BC060088|Fam33a|66140|family with sequence similarity 33, member A	BC052151|Fam33a|66140|family with sequence similarity 33, member A	BC096627|Fam33a|66140|family with sequence similarity 33, member A	AK013317|Fam33a|66140|family with sequence similarity 33, member A	AK013370|Fam33a|66140|family with sequence similarity 33, member A	AK017811|Fam33a|66140|family with sequence similarity 33, member A	NM_025377|Fam33a|66140|family with sequence similarity 33, member A	AK162628|Fam33a|66140|family with sequence similarity 33, member A
mm9_v1_chr16_-_20426357_20426468	0.0319666	NKX3-2.p2	BC042581|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB019003|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC090629|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC061132|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_013790|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_176839|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr15_+_9070294_9070420	0.0318813	NKX3-2.p2	AK036527|Lmbrd2|320506|LMBR1 domain containing 2	AK079450|Lmbrd2|320506|LMBR1 domain containing 2	NM_177178|Lmbrd2|320506|LMBR1 domain containing 2	BC120727|Lmbrd2|320506|LMBR1 domain containing 2	BC125421|Lmbrd2|320506|LMBR1 domain containing 2	AK153728|Lmbrd2|320506|LMBR1 domain containing 2	BC095971|Lmbrd2|320506|LMBR1 domain containing 2
mm9_v1_chr19_-_34601874_34601967	0.0318795	NKX3-2.p2	AK154804|Lipa|16889|lysosomal acid lipase A	BC058564|Lipa|16889|lysosomal acid lipase A	AK088659|Lipa|16889|lysosomal acid lipase A	AK149791|Lipa|16889|lysosomal acid lipase A	AK169567|Lipa|16889|lysosomal acid lipase A	AK153624|Lipa|16889|lysosomal acid lipase A	AK083099|Lipa|16889|lysosomal acid lipase A	AK164007|Lipa|16889|lysosomal acid lipase A	NM_001111100|Lipa|16889|lysosomal acid lipase A	NM_021460|Lipa|16889|lysosomal acid lipase A
mm9_v1_chr12_-_74387687_74387697	0.0318159	NKX3-2.p2	BC012521|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	AK049127|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	AK011576|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	NM_029580|Trmt5|76357|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)
mm9_v1_chr8_+_14095884_14096088	0.0317555	NKX3-2.p2	BC118969|Dlgap2|244310|discs, large (Drosophila) homolog-associated protein 2
mm9_v1_chr7_+_97535516_97535523	0.0317481	NKX3-2.p2	AB057756|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr18_+_62339779_62339836	0.0317411	NKX3-2.p2	AK042188|Gm9949|225609|predicted gene 9949
mm9_v1_chr10_-_128002987_128002990	0.0317043	NKX3-2.p2	AK076286|Pa2g4|18813|proliferation-associated 2G4	BC037623|Pa2g4|18813|proliferation-associated 2G4	AK168582|Pa2g4|18813|proliferation-associated 2G4	NM_011119|Pa2g4|18813|proliferation-associated 2G4
mm9_v1_chr1_+_75432496_75432530	0.0316875	NKX3-2.p2	NM_133708|Gmppa|69080|GDP-mannose pyrophosphorylase A	AK007463|Gmppa|69080|GDP-mannose pyrophosphorylase A
mm9_v1_chr2_-_126501326_126501329	0.0315837	NKX3-2.p2	AK040722|Gabpb1|14391|GA repeat binding protein, beta 1
mm9_v1_chr17_+_44914115_44914127	0.0315636	NKX3-2.p2	AK075916|Supt3h|109115|suppressor of Ty 3 homolog (S. cerevisiae)	NM_178652|Supt3h|109115|suppressor of Ty 3 homolog (S. cerevisiae)
mm9_v1_chr3_+_89883564_89883639	0.0314802	NKX3-2.p2	AK169821|Tpm3|59069|tropomyosin 3, gamma	AK167534|Tpm3|59069|tropomyosin 3, gamma	AK145238|Tpm3|59069|tropomyosin 3, gamma	AK145243|Tpm3|59069|tropomyosin 3, gamma	AK145804|Tpm3|59069|tropomyosin 3, gamma	AK151500|Tpm3|59069|tropomyosin 3, gamma	AK151571|Tpm3|59069|tropomyosin 3, gamma	AK151602|Tpm3|59069|tropomyosin 3, gamma	AK164086|Tpm3|59069|tropomyosin 3, gamma	AK165428|Tpm3|59069|tropomyosin 3, gamma	AK167581|Tpm3|59069|tropomyosin 3, gamma	X53753|Tpm3|59069|tropomyosin 3, gamma	AK088111|Tpm3|59069|tropomyosin 3, gamma	AK088902|Tpm3|59069|tropomyosin 3, gamma	AK151578|Tpm3|59069|tropomyosin 3, gamma	AK151991|Tpm3|59069|tropomyosin 3, gamma	AK152260|Tpm3|59069|tropomyosin 3, gamma	AK050665|Tpm3|59069|tropomyosin 3, gamma	AK166836|Tpm3|59069|tropomyosin 3, gamma	AK167268|Tpm3|59069|tropomyosin 3, gamma	AK169245|Tpm3|59069|tropomyosin 3, gamma	BC092045|Tpm3|59069|tropomyosin 3, gamma	AK146349|Tpm3|59069|tropomyosin 3, gamma	AK153031|Tpm3|59069|tropomyosin 3, gamma	AK169102|Tpm3|59069|tropomyosin 3, gamma	AK151595|Tpm3|59069|tropomyosin 3, gamma	AK152659|Tpm3|59069|tropomyosin 3, gamma	AK168843|Tpm3|59069|tropomyosin 3, gamma
mm9_v1_chr12_-_85741801_85741813	0.0314628	NKX3-2.p2	AK079267|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK002618|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr16_+_16870955_16870979	0.0314433	NKX3-2.p2	AK146475|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr4_+_147976641_147976774	0.0314302	NKX3-2.p2	NM_001003893|Masp2|17175|mannan-binding lectin serine peptidase 2	NM_010767|Masp2|17175|mannan-binding lectin serine peptidase 2	AJ250369|Masp2|17175|mannan-binding lectin serine peptidase 2	AK050052|Masp2|17175|mannan-binding lectin serine peptidase 2	AK149421|Masp2|17175|mannan-binding lectin serine peptidase 2	Y19160|Masp2|17175|mannan-binding lectin serine peptidase 2	Y19163|Masp2|17175|mannan-binding lectin serine peptidase 2	BC013893|Masp2|17175|mannan-binding lectin serine peptidase 2
mm9_v1_chr17_+_72119030_72119041	0.0312875	NKX3-2.p2	AK029962|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	NM_175378|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK018895|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK075758|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	AK161301|Clip4|78785|CAP-GLY domain containing linker protein family, member 4
mm9_v1_chr4_+_48058102_48058256	0.030903	NKX3-2.p2	BC038520|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3	BC068150|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3
mm9_v1_chr8_+_98239780_98239831	0.0308354	NKX3-2.p2	BC139198|Setd6|66083|SET domain containing 6	BC139199|Setd6|66083|SET domain containing 6	AK075597|Setd6|66083|SET domain containing 6	AK010304|Setd6|66083|SET domain containing 6	NM_001035123|Setd6|66083|SET domain containing 6	AK167753|Setd6|66083|SET domain containing 6
mm9_v1_chr4_-_117852550_117852665	0.030809	NKX3-2.p2	BC028866|Kdm4a|230674|lysine (K)-specific demethylase 4A	AK145947|Kdm4a|230674|lysine (K)-specific demethylase 4A	AK054095|Kdm4a|230674|lysine (K)-specific demethylase 4A	AK145066|Kdm4a|230674|lysine (K)-specific demethylase 4A	NM_001161823|Kdm4a|230674|lysine (K)-specific demethylase 4A	NM_172382|Kdm4a|230674|lysine (K)-specific demethylase 4A
mm9_v1_chr5_+_91360221_91360225	0.0306814	NKX3-2.p2	NM_026788|Mthfd2l|665563|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
mm9_v1_chr17_-_14831095_14831102	0.0306601	NKX3-2.p2	L07803|Thbs2|21826|thrombospondin 2	M64866|Thbs2|21826|thrombospondin 2	AK132508|Thbs2|21826|thrombospondin 2
mm9_v1_chr7_+_5035137_5035428	0.0306114	NKX3-2.p2	BC046962|Epn1|13854|epsin 1
mm9_v1_chr3_+_88357635_88357640	0.0306089	NKX3-2.p2	AB040050|Ubqln4|94232|ubiquilin 4	NM_033526|Ubqln4|94232|ubiquilin 4
mm9_v1_chr11_-_65601774_65601862	0.0305953	NKX3-2.p2	AK139777|Map2k4|26398|mitogen-activated protein kinase kinase 4	AK044534|Map2k4|26398|mitogen-activated protein kinase kinase 4	AK044698|Map2k4|26398|mitogen-activated protein kinase kinase 4	AK036928|Map2k4|26398|mitogen-activated protein kinase kinase 4	NM_009157|Map2k4|26398|mitogen-activated protein kinase kinase 4
mm9_v1_chr2_+_138082383_138082408	0.0304436	NKX3-2.p2	
mm9_v1_chr14_-_31832274_31832280	0.0303651	NKX3-2.p2	NM_153547|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK167094|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)
mm9_v1_chr7_+_148748102_148748107	0.0303546	NKX3-2.p2	X14972|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr11_+_69831951_69832106	0.0303536	NKX3-2.p2	NM_001109752|Dlg4|13385|discs, large homolog 4 (Drosophila)	NM_007864|Dlg4|13385|discs, large homolog 4 (Drosophila)
mm9_v1_chrX_+_98572571_98572682	0.0302709	NKX3-2.p2	BC026833|Gjb1|14618|gap junction protein, beta 1	NM_008124|Gjb1|14618|gap junction protein, beta 1
mm9_v1_chr15_-_6824238_6824366	0.030266	NKX3-2.p2	AK040020|Osmr|18414|oncostatin M receptor	AK087179|Osmr|18414|oncostatin M receptor	AF058805|Osmr|18414|oncostatin M receptor	NM_011019|Osmr|18414|oncostatin M receptor
mm9_v1_chr1_-_54983048_54983087	0.0301774	NKX3-2.p2	BC157918|Ankrd44|329154|ankyrin repeat domain 44	BC157951|Ankrd44|329154|ankyrin repeat domain 44	BC172102|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr15_+_98465328_98465599	0.0300476	NKX3-2.p2	U20372|Cacnb3|12297|calcium channel, voltage-dependent, beta 3 subunit	AF498245|Cacnb3|12297|calcium channel, voltage-dependent, beta 3 subunit	AF498246|Cacnb3|12297|calcium channel, voltage-dependent, beta 3 subunit
mm9_v1_chr8_+_74092759_74092780	0.0300425	NKX3-2.p2	AK040923|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr12_+_56921498_56921597	0.0300414	NKX3-2.p2	AK015025|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1
mm9_v1_chr3_+_89006824_89006905	0.0300271	NKX3-2.p2	AK082767|Gba|14466|glucosidase, beta, acid	NM_001077411|Gba|14466|glucosidase, beta, acid	AK201806|Gba|14466|glucosidase, beta, acid	AK166198|Gba|14466|glucosidase, beta, acid	BC006663|Gba|14466|glucosidase, beta, acid	NM_008094|Gba|14466|glucosidase, beta, acid	AK152745|Gba|14466|glucosidase, beta, acid
mm9_v1_chr2_+_24831548_24831624	0.0299944	NKX3-2.p2	NM_146251|Pnpla7|241274|patatin-like phospholipase domain containing 7	AK148380|Pnpla7|241274|patatin-like phospholipase domain containing 7	AK088362|Pnpla7|241274|patatin-like phospholipase domain containing 7	AK170417|Pnpla7|241274|patatin-like phospholipase domain containing 7	BC021312|Pnpla7|241274|patatin-like phospholipase domain containing 7
mm9_v1_chr19_-_5801766_5801972	0.0299142	NKX3-2.p2	BC094333|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC039749|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC004722|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr11_+_3414792_3414875	0.0298549	NKX3-2.p2	BC147333|Selm|114679|selenoprotein M	BC147332|Selm|114679|selenoprotein M	AK018791|Selm|114679|selenoprotein M
mm9_v1_chr1_-_89905074_89905142	0.02979	NKX3-2.p2	BC030843|Usp40|227334|ubiquitin specific peptidase 40	AK166303|Usp40|227334|ubiquitin specific peptidase 40	BC117957|Usp40|227334|ubiquitin specific peptidase 40	BC117958|Usp40|227334|ubiquitin specific peptidase 40	AK050239|Usp40|227334|ubiquitin specific peptidase 40	AK045613|Usp40|227334|ubiquitin specific peptidase 40	AK132295|Usp40|227334|ubiquitin specific peptidase 40	NM_001033291|Usp40|227334|ubiquitin specific peptidase 40	NM_001198573|Usp40|227334|ubiquitin specific peptidase 40
mm9_v1_chr6_+_90424727_90424917	0.0297592	NKX3-2.p2	AK185404|Klf15|66277|Kruppel-like factor 15	AK211444|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr7_+_96781228_96781259	0.029735	NKX3-2.p2	BC099935|Me3|109264|malic enzyme 3, NADP(+)-dependent, mitochondrial
mm9_v1_chr17_-_34987150_34987162	0.0297154	NKX3-2.p2	AK139051|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr7_+_82600419_82600490	0.0295246	NKX3-2.p2	NM_029332|Akap13|75547|A kinase (PRKA) anchor protein 13	AK157986|Akap13|75547|A kinase (PRKA) anchor protein 13	AK172125|Akap13|75547|A kinase (PRKA) anchor protein 13
mm9_v1_chr4_-_155043283_155043335	0.029492	NKX3-2.p2	AK147940|Mib2|76580|mindbomb homolog 2 (Drosophila)	AK081738|Mib2|76580|mindbomb homolog 2 (Drosophila)	NM_145124|Mib2|76580|mindbomb homolog 2 (Drosophila)
mm9_v1_chr16_-_4213389_4213406	0.0294347	NKX3-2.p2	BC072594|Crebbp|12914|CREB binding protein	NM_001025432|Crebbp|12914|CREB binding protein	BC010297|Crebbp|12914|CREB binding protein
mm9_v1_chr4_+_45985143_45985279	0.0294326	NKX3-2.p2	AK150077|Tdrd7|100121|tudor domain containing 7
mm9_v1_chr19_+_10651924_10651980	0.0292251	NKX3-2.p2	AK169729|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK172638|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK040692|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK160179|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK168841|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK170911|Cybasc3|225912|cytochrome b, ascorbate dependent 3
mm9_v1_chr6_+_71493841_71493983	0.0292141	NKX3-2.p2	AK083562|Vps24|66700|vacuolar protein sorting 24 (yeast)	NM_025783|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK018611|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK014818|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK016677|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC049964|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK009414|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC027441|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC039759|Vps24|66700|vacuolar protein sorting 24 (yeast)
mm9_v1_chr7_+_119902897_119902956	0.0291813	NKX3-2.p2	NM_001166585|Tead1|21676|TEA domain family member 1	L06865|Tead1|21676|TEA domain family member 1	BC052021|Tead1|21676|TEA domain family member 1	BC060138|Tead1|21676|TEA domain family member 1
mm9_v1_chr11_+_104469313_104469402	0.0291474	NKX3-2.p2	BC125518|Itgb3|16416|integrin beta 3	BC125520|Itgb3|16416|integrin beta 3	NM_016780|Itgb3|16416|integrin beta 3	AK157958|Itgb3|16416|integrin beta 3	AF026509|Itgb3|16416|integrin beta 3	AY541673|Itgb3|16416|integrin beta 3	U83167|Itgb3|16416|integrin beta 3
mm9_v1_chr7_+_54101226_54101257	0.0289231	NKX3-2.p2	BC066858|Ldha|16828|lactate dehydrogenase A	BC094019|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr1_+_173367685_173367771	0.028886	NKX3-2.p2	AK033574|F11r|16456|F11 receptor	NM_172647|F11r|16456|F11 receptor	BC021876|F11r|16456|F11 receptor	CT010347|F11r|16456|F11 receptor
mm9_v1_chr7_-_28338185_28338214	0.0287974	NKX3-2.p2	BC076586|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr18_-_35091570_35091661	0.028757	NKX3-2.p2	BC013717|Etf1|225363|eukaryotic translation termination factor 1	AK170221|Etf1|225363|eukaryotic translation termination factor 1	AK077559|Etf1|225363|eukaryotic translation termination factor 1	AK049607|Etf1|225363|eukaryotic translation termination factor 1	AK164020|Etf1|225363|eukaryotic translation termination factor 1	AK139933|Etf1|225363|eukaryotic translation termination factor 1	AK166740|Etf1|225363|eukaryotic translation termination factor 1	AK169345|Etf1|225363|eukaryotic translation termination factor 1	NM_144866|Etf1|225363|eukaryotic translation termination factor 1
mm9_v1_chr6_-_25759187_25759219	0.0286142	NKX3-2.p2	BC016121|Pot1a|101185|protection of telomeres 1A	AK135346|Pot1a|101185|protection of telomeres 1A	AK137376|Pot1a|101185|protection of telomeres 1A	AK075661|Pot1a|101185|protection of telomeres 1A	AK085041|Pot1a|101185|protection of telomeres 1A	AK040864|Pot1a|101185|protection of telomeres 1A
mm9_v1_chr11_+_58660666_58660700	0.0285325	NKX3-2.p2	
mm9_v1_chr12_+_114047124_114047205	0.0285104	NKX3-2.p2	AK161400|BC022687|217887|cDNA sequence BC022687	AK081297|BC022687|217887|cDNA sequence BC022687	BC090976|BC022687|217887|cDNA sequence BC022687	NM_145450|BC022687|217887|cDNA sequence BC022687
mm9_v1_chr15_+_78813524_78813616	0.0284619	NKX3-2.p2	AK053194|Triobp|110253|TRIO and F-actin binding protein	AK170390|Triobp|110253|TRIO and F-actin binding protein	BC042760|Triobp|110253|TRIO and F-actin binding protein	AK197781|Triobp|110253|TRIO and F-actin binding protein
mm9_v1_chr7_-_133839152_133839297	0.0284082	NKX3-2.p2	AK014753|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	BC145468|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	BC145688|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	AK053901|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	BC055909|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	AK010828|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	AK049139|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	NM_029420|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	AK010748|Slx1b|75764|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
mm9_v1_chr2_+_78710638_78710757	0.0283611	NKX3-2.p2	AF003346|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr11_+_101309725_101309821	0.0283525	NKX3-2.p2	AK131884|Ifi35|70110|interferon-induced protein 35	NM_027320|Ifi35|70110|interferon-induced protein 35	AK008161|Ifi35|70110|interferon-induced protein 35	BC008158|Ifi35|70110|interferon-induced protein 35
mm9_v1_chr2_+_138082301_138082378	0.0283525	NKX3-2.p2	NM_001025431|Btbd3|228662|BTB (POZ) domain containing 3	AK052530|Btbd3|228662|BTB (POZ) domain containing 3	AK161924|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr19_-_36131650_36131849	0.0283409	NKX3-2.p2	AK138150|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	FM178515|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	FM178516|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	BC116986|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	Z23107|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	AK139197|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	NM_008315|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7
mm9_v1_chr5_-_139060905_139060950	0.0282949	NKX3-2.p2	AK153887|Zfp68|24135|zinc finger protein 68	AK146092|Zfp68|24135|zinc finger protein 68	AK044831|Zfp68|24135|zinc finger protein 68
mm9_v1_chr16_+_11203475_11203482	0.0282569	NKX3-2.p2	AK029005|2610020C07Rik|69918|RIKEN cDNA 2610020C07 gene	AK011479|2610020C07Rik|69918|RIKEN cDNA 2610020C07 gene
mm9_v1_chr16_-_10395401_10395557	0.0281881	NKX3-2.p2	AK014352|Tekt5|70426|tektin 5	BC115969|Tekt5|70426|tektin 5	NM_001099275|Tekt5|70426|tektin 5	GQ292766|Tekt5|70426|tektin 5
mm9_v1_chr1_-_80210403_80210518	0.028155	NKX3-2.p2	BC150872|Fam124b|241128|family with sequence similarity 124, member B	AK043867|Fam124b|241128|family with sequence similarity 124, member B	NM_173425|Fam124b|241128|family with sequence similarity 124, member B
mm9_v1_chr13_-_115892166_115892179	0.0281097	NKX3-2.p2	AK035870|Itga1|109700|integrin alpha 1	NM_001033228|Itga1|109700|integrin alpha 1
mm9_v1_chr3_-_35899453_35899599	0.0280061	NKX3-2.p2	AK178493|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK168589|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AF310338|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK032203|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK007782|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	BC021382|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK031072|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	NM_023644|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
mm9_v1_chr11_-_60016324_60016387	0.0279904	NKX3-2.p2	
mm9_v1_chr2_-_130468507_130468540	0.0279088	NKX3-2.p2	AK161711|Prosapip1|241638|ProSAPiP1 protein	AK148251|Prosapip1|241638|ProSAPiP1 protein	NM_197945|Prosapip1|241638|ProSAPiP1 protein
mm9_v1_chr13_-_56855068_56855187	0.0279054	NKX3-2.p2	
mm9_v1_chr7_+_107855215_107855319	0.0278899	NKX3-2.p2	BC079886|Fam168a|319604|family with sequence similarity 168, member A	NM_178764|Fam168a|319604|family with sequence similarity 168, member A	AK043356|Fam168a|319604|family with sequence similarity 168, member A	AK047153|Fam168a|319604|family with sequence similarity 168, member A	AK048559|Fam168a|319604|family with sequence similarity 168, member A	AK051453|Fam168a|319604|family with sequence similarity 168, member A	AK084931|Fam168a|319604|family with sequence similarity 168, member A	AK137424|Fam168a|319604|family with sequence similarity 168, member A
mm9_v1_chr3_+_89222458_89222496	0.0278723	NKX3-2.p2	NM_011368|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr2_+_146838735_146838857	0.027834	NKX3-2.p2	AK168037|Xrn2|24128|5'-3' exoribonuclease 2	AK031247|Xrn2|24128|5'-3' exoribonuclease 2	AK167019|Xrn2|24128|5'-3' exoribonuclease 2	BC054743|Xrn2|24128|5'-3' exoribonuclease 2	NM_011917|Xrn2|24128|5'-3' exoribonuclease 2	AK011711|Xrn2|24128|5'-3' exoribonuclease 2	AK053643|Xrn2|24128|5'-3' exoribonuclease 2	AK133654|Xrn2|24128|5'-3' exoribonuclease 2	AK163899|Xrn2|24128|5'-3' exoribonuclease 2	BC052395|Xrn2|24128|5'-3' exoribonuclease 2	AK004800|Xrn2|24128|5'-3' exoribonuclease 2	BC052823|Xrn2|24128|5'-3' exoribonuclease 2	D38517|Xrn2|24128|5'-3' exoribonuclease 2
mm9_v1_chr2_-_143814199_143814217	0.0278262	NKX3-2.p2	AK019964|Rrbp1|81910|ribosome binding protein 1
mm9_v1_chr14_+_58143613_58143864	0.0277311	NKX3-2.p2	AK131917|Il17d|239114|interleukin 17D	NM_145837|Il17d|239114|interleukin 17D	AF458063|Il17d|239114|interleukin 17D
mm9_v1_chr8_-_72438496_72438584	0.0275422	NKX3-2.p2	BC019178|Gatad2a|234366|GATA zinc finger domain containing 2A	AK189334|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr19_+_12040311_12040373	0.0275353	NKX3-2.p2	NM_001033174|Osbp|76303|oxysterol binding protein
mm9_v1_chr1_+_155610107_155610185	0.0274894	NKX3-2.p2	
mm9_v1_chr3_+_154259658_154259674	0.0273989	NKX3-2.p2	AK133820|Cryz|12972|crystallin, zeta
mm9_v1_chr2_-_34655238_34655332	0.027372	NKX3-2.p2	BC019800|Rabepk|227746|Rab9 effector protein with kelch motifs	AK035343|Rabepk|227746|Rab9 effector protein with kelch motifs	NM_145522|Rabepk|227746|Rab9 effector protein with kelch motifs	AK153022|Rabepk|227746|Rab9 effector protein with kelch motifs
mm9_v1_chrX_-_19868889_19868932	0.0272982	NKX3-2.p2	AK041169|Slc9a7|236727|solute carrier family 9 (sodium/hydrogen exchanger), member 7	NM_177353|Slc9a7|236727|solute carrier family 9 (sodium/hydrogen exchanger), member 7	BC058750|Slc9a7|236727|solute carrier family 9 (sodium/hydrogen exchanger), member 7	AK043187|Slc9a7|236727|solute carrier family 9 (sodium/hydrogen exchanger), member 7	AK078577|Slc9a7|236727|solute carrier family 9 (sodium/hydrogen exchanger), member 7
mm9_v1_chr2_+_111323505_111323588	0.0271877	NKX3-2.p2	BC137761|Olfr1289|258399|olfactory receptor 1289	BC120736|Olfr1289|258399|olfactory receptor 1289	NM_146404|Olfr1289|258399|olfactory receptor 1289
mm9_v1_chr7_-_52650954_52651117	0.0270007	NKX3-2.p2	BC131994|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	BC132020|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK011564|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	NM_009224|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	BC049128|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK005045|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK014311|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK133115|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK146729|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK077425|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)	AK148013|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)
mm9_v1_chr5_+_3596311_3596390	0.0269935	NKX3-2.p2	AK149599|Pex1|71382|peroxisomal biogenesis factor 1
mm9_v1_chr4_-_125998912_125998946	0.0268722	NKX3-2.p2	AK147034|Adprhl2|100206|ADP-ribosylhydrolase like 2	BC023177|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK169070|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK143583|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK171780|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK149904|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK150202|Adprhl2|100206|ADP-ribosylhydrolase like 2	AJ427296|Adprhl2|100206|ADP-ribosylhydrolase like 2	NM_133883|Adprhl2|100206|ADP-ribosylhydrolase like 2
mm9_v1_chr9_-_57315800_57315896	0.0267657	NKX3-2.p2	AF241833|Scamp5|56807|secretory carrier membrane protein 5	BC018613|Scamp5|56807|secretory carrier membrane protein 5	NM_020270|Scamp5|56807|secretory carrier membrane protein 5
mm9_v1_chr3_-_88576415_88576522	0.0267261	NKX3-2.p2	AK158745|Syt11|229521|synaptotagmin XI	AK144169|Syt11|229521|synaptotagmin XI	AK164082|Syt11|229521|synaptotagmin XI	BC054526|Syt11|229521|synaptotagmin XI	AK164368|Syt11|229521|synaptotagmin XI	NM_018804|Syt11|229521|synaptotagmin XI
mm9_v1_chr1_-_25886551_25886551	0.0266107	NKX3-2.p2	BC099951|Bai3|210933|brain-specific angiogenesis inhibitor 3	NM_175642|Bai3|210933|brain-specific angiogenesis inhibitor 3
mm9_v1_chr2_+_164312376_164312376	0.026503	NKX3-2.p2	AK003735|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_001048228|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr1_-_186669499_186669729	0.0264433	NKX3-2.p2	AK178160|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK180823|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	BC006888|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	BC042686|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK002874|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK051230|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK078650|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	NM_133684|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2	AK017150|Mosc2|67247|MOCO sulphurase C-terminal domain containing 2
mm9_v1_chr3_-_87552469_87552546	0.0264081	NKX3-2.p2	AK016993|4933430H15Rik|74485|RIKEN cDNA 4933430H15 gene	AK029938|4933430H15Rik|74485|RIKEN cDNA 4933430H15 gene	NM_028971|4933430H15Rik|74485|RIKEN cDNA 4933430H15 gene
mm9_v1_chr12_+_87027595_87027673	0.0263126	NKX3-2.p2	AK018587|Batf|53314|basic leucine zipper transcription factor, ATF-like	AF017021|Batf|53314|basic leucine zipper transcription factor, ATF-like	NM_016767|Batf|53314|basic leucine zipper transcription factor, ATF-like
mm9_v1_chr1_-_75475320_75475722	0.0260668	NKX3-2.p2	AK160734|Chpf|74241|chondroitin polymerizing factor	AK177663|Chpf|74241|chondroitin polymerizing factor	AK187637|Chpf|74241|chondroitin polymerizing factor	AK190649|Chpf|74241|chondroitin polymerizing factor	BC030889|Chpf|74241|chondroitin polymerizing factor	AK006466|Chpf|74241|chondroitin polymerizing factor	AK155424|Chpf|74241|chondroitin polymerizing factor
mm9_v1_chr3_-_32635636_32635679	0.0260443	NKX3-2.p2	BC038065|Mrpl47|74600|mitochondrial ribosomal protein L47	BC029173|Mrpl47|74600|mitochondrial ribosomal protein L47	BC087953|Mrpl47|74600|mitochondrial ribosomal protein L47	NM_029017|Mrpl47|74600|mitochondrial ribosomal protein L47
mm9_v1_chr5_-_135223110_135223192	0.0259916	NKX3-2.p2	U08210|Eln|13717|elastin	BC051074|Eln|13717|elastin	AK086777|Eln|13717|elastin	AK041860|Eln|13717|elastin	NM_007925|Eln|13717|elastin	AK080277|Eln|13717|elastin	BC051649|Eln|13717|elastin
mm9_v1_chr14_+_54980488_54980535	0.0259503	NKX3-2.p2	AK139484|Oxa1l|69089|oxidase assembly 1-like	AK154304|Oxa1l|69089|oxidase assembly 1-like	AK007567|Oxa1l|69089|oxidase assembly 1-like	AK087756|Oxa1l|69089|oxidase assembly 1-like	AK028379|Oxa1l|69089|oxidase assembly 1-like	AK052432|Oxa1l|69089|oxidase assembly 1-like	AK077624|Oxa1l|69089|oxidase assembly 1-like	AK154532|Oxa1l|69089|oxidase assembly 1-like	AK163101|Oxa1l|69089|oxidase assembly 1-like	AK170898|Oxa1l|69089|oxidase assembly 1-like	NM_026936|Oxa1l|69089|oxidase assembly 1-like	AK044817|Oxa1l|69089|oxidase assembly 1-like	BC027191|Oxa1l|69089|oxidase assembly 1-like
mm9_v1_chr3_-_96709197_96709246	0.0259229	NKX3-2.p2	BC010729|Gpr89|67549|G protein-coupled receptor 89	AK016787|Gpr89|67549|G protein-coupled receptor 89	NM_026229|Gpr89|67549|G protein-coupled receptor 89	AK002937|Gpr89|67549|G protein-coupled receptor 89
mm9_v1_chr8_+_28196312_28196323	0.0259136	NKX3-2.p2	AF378759|Gpr124|78560|G protein-coupled receptor 124	NM_054044|Gpr124|78560|G protein-coupled receptor 124	BC138451|Gpr124|78560|G protein-coupled receptor 124	BC138452|Gpr124|78560|G protein-coupled receptor 124
mm9_v1_chr5_-_31999977_32000001	0.0258779	NKX3-2.p2	BC023339|Rbks|71336|ribokinase	NM_153196|Rbks|71336|ribokinase	AK017229|Rbks|71336|ribokinase	AK138939|Rbks|71336|ribokinase
mm9_v1_chr2_-_48804672_48804789	0.0257656	NKX3-2.p2	BC019748|Orc4|26428|origin recognition complex, subunit 4	BC015072|Orc4|26428|origin recognition complex, subunit 4	AJ003140|Orc4|26428|origin recognition complex, subunit 4	AK011550|Orc4|26428|origin recognition complex, subunit 4	AK012669|Orc4|26428|origin recognition complex, subunit 4	AK049534|Orc4|26428|origin recognition complex, subunit 4	AK084326|Orc4|26428|origin recognition complex, subunit 4	AK010258|Orc4|26428|origin recognition complex, subunit 4	AK169291|Orc4|26428|origin recognition complex, subunit 4	AK076324|Orc4|26428|origin recognition complex, subunit 4	NM_001177313|Orc4|26428|origin recognition complex, subunit 4	NM_011958|Orc4|26428|origin recognition complex, subunit 4
mm9_v1_chr9_+_65524331_65524426	0.0256748	NKX3-2.p2	AK169243|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	NM_010952|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK143231|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK146074|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK160444|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168853|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168662|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC055442|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC083114|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AF057298|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC005477|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC110690|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene
mm9_v1_chr6_+_8209296_8209471	0.0256647	NKX3-2.p2	AK158918|Gm16039|100036521|predicted gene 16039	AK009885|Gm16039|100036521|predicted gene 16039
mm9_v1_chrX_+_70728939_70728991	0.0256405	NKX3-2.p2	BC057185|Bgn|12111|biglycan	AK135496|Bgn|12111|biglycan	AK155973|Bgn|12111|biglycan	AK164867|Bgn|12111|biglycan	L20276|Bgn|12111|biglycan	NM_007542|Bgn|12111|biglycan	AK171870|Bgn|12111|biglycan	AK086920|Bgn|12111|biglycan	BC019502|Bgn|12111|biglycan	BC005452|Bgn|12111|biglycan
mm9_v1_chr9_+_108756367_108756465	0.0256364	NKX3-2.p2	AK080750|Slc26a6|171429|solute carrier family 26, member 6	AK163670|Slc26a6|171429|solute carrier family 26, member 6	AK163671|Slc26a6|171429|solute carrier family 26, member 6	NM_134420|Slc26a6|171429|solute carrier family 26, member 6	AK029238|Slc26a6|171429|solute carrier family 26, member 6	AK046993|Slc26a6|171429|solute carrier family 26, member 6	AK053088|Slc26a6|171429|solute carrier family 26, member 6	AY049076|Slc26a6|171429|solute carrier family 26, member 6
mm9_v1_chr14_-_41882362_41882496	0.0255594	NKX3-2.p2	BC113750|Dydc2|71200|DPY30 domain containing 2	NM_027717|Dydc2|71200|DPY30 domain containing 2	AK016963|Dydc2|71200|DPY30 domain containing 2
mm9_v1_chr9_+_123022332_123022396	0.025455	NKX3-2.p2	BC132363|Exosc7|66446|exosome component 7	BC145675|Exosc7|66446|exosome component 7	NM_001081188|Exosc7|66446|exosome component 7	AK085426|Exosc7|66446|exosome component 7	AK011294|Exosc7|66446|exosome component 7	BC039655|Exosc7|66446|exosome component 7	BC052656|Exosc7|66446|exosome component 7	AK129057|Exosc7|66446|exosome component 7
mm9_v1_chr17_+_38040466_38040492	0.0253535	NKX3-2.p2	BC132433|Olfr127|258374|olfactory receptor 127	BC145997|Olfr127|258374|olfactory receptor 127	NM_146377|Olfr127|258374|olfactory receptor 127
mm9_v1_chr9_-_64101138_64101232	0.0253273	NKX3-2.p2	L02526|Map2k1|26395|mitogen-activated protein kinase kinase 1	BC054754|Map2k1|26395|mitogen-activated protein kinase kinase 1	BC051137|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr7_+_29619155_29619200	0.0252194	NKX3-2.p2	BC094008|Lgals4|16855|lectin, galactose binding, soluble 4	AF510729|Lgals4|16855|lectin, galactose binding, soluble 4	BC021632|Lgals4|16855|lectin, galactose binding, soluble 4	BC011236|Lgals4|16855|lectin, galactose binding, soluble 4	AF026794|Lgals6|16857|lectin, galactose binding, soluble 6	NM_010707|Lgals6|16857|lectin, galactose binding, soluble 6
mm9_v1_chr17_-_34987110_34987130	0.0251714	NKX3-2.p2	AK169864|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)	BC065999|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr11_-_102178006_102178018	0.0251694	NKX3-2.p2	BC024622|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr6_+_134961629_134961652	0.0251363	NKX3-2.p2	NM_026360|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK010310|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132242|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132244|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK076982|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC060168|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC095944|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm9_v1_chr10_+_128185549_128185593	0.0250913	NKX3-2.p2	BC049647|Wibg|78428|within bgcn homolog (Drosophila)	NM_001170869|Wibg|78428|within bgcn homolog (Drosophila)
mm9_v1_chr8_+_127578094_127578129	0.0250732	NKX3-2.p2	AF513723|Disc1|244667|disrupted in schizophrenia 1	AF513724|Disc1|244667|disrupted in schizophrenia 1	NM_174853|Disc1|244667|disrupted in schizophrenia 1	NM_174854|Disc1|244667|disrupted in schizophrenia 1	AJ506180|Disc1|244667|disrupted in schizophrenia 1	AJ506179|Disc1|244667|disrupted in schizophrenia 1	AY177673|Disc1|244667|disrupted in schizophrenia 1	AY320287|Disc1|244667|disrupted in schizophrenia 1
mm9_v1_chr15_+_81767370_81767389	0.025013	NKX3-2.p2	BC016109|Csdc2|105859|cold shock domain containing C2, RNA binding
mm9_v1_chr1_+_94728217_94728298	0.0248313	NKX3-2.p2	AK154899|Gpc1|14733|glypican 1	AF185613|Gpc1|14733|glypican 1	NM_016696|Gpc1|14733|glypican 1
mm9_v1_chr7_+_3597085_3597155	0.0247855	NKX3-2.p2	BC060684|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC141041|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC053437|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr8_-_125135240_125135386	0.0247417	NKX3-2.p2	BC004002|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK220245|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK033946|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AF111346|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK159592|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	NM_001193645|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	NM_016722|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase
mm9_v1_chr11_-_70223528_70223535	0.0246714	NKX3-2.p2	AK005027|Pelp1|75273|proline, glutamic acid and leucine rich protein 1	AK016197|Pelp1|75273|proline, glutamic acid and leucine rich protein 1	AK128966|Pelp1|75273|proline, glutamic acid and leucine rich protein 1	NM_029231|Pelp1|75273|proline, glutamic acid and leucine rich protein 1
mm9_v1_chr9_+_77602377_77602381	0.0245667	NKX3-2.p2	AK169676|Gclc|14629|glutamate-cysteine ligase, catalytic subunit
mm9_v1_chr11_-_62270815_62270835	0.0245423	NKX3-2.p2	AK035813|Ncor1|20185|nuclear receptor co-repressor 1	AK077420|Ncor1|20185|nuclear receptor co-repressor 1	NM_011308|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr5_+_135526788_135526925	0.0244482	NKX3-2.p2	
mm9_v1_chr6_-_35083605_35083717	0.0244339	NKX3-2.p2	AK028190|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	BC048243|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	BC058778|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK144760|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK029753|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	U71269|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK009234|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK032248|Cnot4|53621|CCR4-NOT transcription complex, subunit 4
mm9_v1_chr3_-_36374739_36374822	0.0243719	NKX3-2.p2	NM_009673|Anxa5|11747|annexin A5
mm9_v1_chr6_+_31170394_31170443	0.0242794	NKX3-2.p2	BC099512|2210408F21Rik|73652|RIKEN cDNA 2210408F21 gene	AK008857|2210408F21Rik|73652|RIKEN cDNA 2210408F21 gene	BC021953|2210408F21Rik|73652|RIKEN cDNA 2210408F21 gene
mm9_v1_chr6_+_88852457_88852516	0.0242687	NKX3-2.p2	AK164913|Tpra1|24100|transmembrane protein, adipocyte asscociated 1
mm9_v1_chr7_-_112717810_112717827	0.0242473	NKX3-2.p2	AK075730|Apbb1|11785|amyloid beta (A4) precursor protein-binding, family B, member 1
mm9_v1_chr8_-_73292296_73292389	0.0242418	NKX3-2.p2	
mm9_v1_chr15_+_67008567_67008676	0.024203	NKX3-2.p2	AK033336|LOC432961|432961|hypothetical LOC432961
mm9_v1_chr17_+_35400983_35401008	0.0240761	NKX3-2.p2	J00407|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr2_-_152158111_152158185	0.0240649	NKX3-2.p2	AK146176|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	AK088591|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	AK166075|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	AK085559|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	NM_001083921|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1
mm9_v1_chr8_+_98057984_98058038	0.0240345	NKX3-2.p2	AK077130|Ccdc113|244608|coiled-coil domain containing 113	NM_172914|Ccdc113|244608|coiled-coil domain containing 113	BC060957|Ccdc113|244608|coiled-coil domain containing 113	BC048506|Ccdc113|244608|coiled-coil domain containing 113
mm9_v1_chr5_+_22252006_22252042	0.0240237	NKX3-2.p2	NM_001081231|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3	NM_029990|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3	AK033906|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3	AK020916|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3
mm9_v1_chr9_-_21875603_21875617	0.0239717	NKX3-2.p2	AK089104|Zfp653|319601|zinc finger protein 653
mm9_v1_chr2_+_156022382_156022502	0.0239006	NKX3-2.p2	NM_172674|Phf20|228829|PHD finger protein 20	AK045309|Phf20|228829|PHD finger protein 20	AK033017|Phf20|228829|PHD finger protein 20	AK038573|Phf20|228829|PHD finger protein 20	AK142424|Phf20|228829|PHD finger protein 20	BC060121|Phf20|228829|PHD finger protein 20
mm9_v1_chr8_-_47060486_47060605	0.023899	NKX3-2.p2	BC107256|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	AK006501|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	AK156041|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	NM_001033148|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene
mm9_v1_chr8_-_109417431_109417531	0.0237548	NKX3-2.p2	AK030924|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK165993|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	NM_145412|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK087721|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK088257|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
mm9_v1_chr2_-_63936044_63936094	0.0237155	NKX3-2.p2	AF263913|Fign|60344|fidgetin	AK163474|Fign|60344|fidgetin	AK164536|Fign|60344|fidgetin	NM_021716|Fign|60344|fidgetin	AK143787|Fign|60344|fidgetin	BC059266|Fign|60344|fidgetin
mm9_v1_chr16_+_29579427_29579538	0.0236297	NKX3-2.p2	AB044138|Opa1|74143|optic atrophy 1 homolog (human)	NM_133752|Opa1|74143|optic atrophy 1 homolog (human)	AK029157|Opa1|74143|optic atrophy 1 homolog (human)	AK053861|Opa1|74143|optic atrophy 1 homolog (human)	AK004715|Opa1|74143|optic atrophy 1 homolog (human)	AK030835|Opa1|74143|optic atrophy 1 homolog (human)	AK145620|Opa1|74143|optic atrophy 1 homolog (human)	AK038446|Opa1|74143|optic atrophy 1 homolog (human)	BC052704|Opa1|74143|optic atrophy 1 homolog (human)	AK050383|Opa1|74143|optic atrophy 1 homolog (human)	AK164872|Opa1|74143|optic atrophy 1 homolog (human)	AK044657|Opa1|74143|optic atrophy 1 homolog (human)	BC138665|Opa1|74143|optic atrophy 1 homolog (human)	BC145959|Opa1|74143|optic atrophy 1 homolog (human)
mm9_v1_chr2_+_152857587_152857587	0.0236287	NKX3-2.p2	AY534253|Xkr7|228787|X Kell blood group precursor related family member 7 homolog	NM_001011732|Xkr7|228787|X Kell blood group precursor related family member 7 homolog
mm9_v1_chrX_+_20374922_20374939	0.0236009	NKX3-2.p2	AK034861|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr6_-_43616140_43616276	0.0235692	NKX3-2.p2	BC023354|Tpk1|29807|thiamine pyrophosphokinase	AK052225|Tpk1|29807|thiamine pyrophosphokinase	AB027568|Tpk1|29807|thiamine pyrophosphokinase	AK035044|Tpk1|29807|thiamine pyrophosphokinase	AK136486|Tpk1|29807|thiamine pyrophosphokinase	NM_013861|Tpk1|29807|thiamine pyrophosphokinase	AK034521|Tpk1|29807|thiamine pyrophosphokinase	BC015246|Tpk1|29807|thiamine pyrophosphokinase	AK028431|Tpk1|29807|thiamine pyrophosphokinase	AK039131|Tpk1|29807|thiamine pyrophosphokinase	AK087844|Tpk1|29807|thiamine pyrophosphokinase
mm9_v1_chr2_-_75816235_75816356	0.0235123	NKX3-2.p2	NM_001081228|Ttc30a2|620631|tetratricopeptide repeat domain 30A2	BC157934|Ttc30a2|620631|tetratricopeptide repeat domain 30A2	BC172090|Ttc30a2|620631|tetratricopeptide repeat domain 30A2	BC158130|Ttc30a2|620631|tetratricopeptide repeat domain 30A2
mm9_v1_chr9_-_50425350_50425362	0.0234831	NKX3-2.p2	BC067205|AU019823|270156|expressed sequence AU019823
mm9_v1_chr17_+_80014390_80014404	0.0234652	NKX3-2.p2	AK139382|Fam82a1|381110|family with sequence similarity 82, member A1
mm9_v1_chr17_+_66132694_66132705	0.0234371	NKX3-2.p2	NM_001114131|Ppp4r1|70351|protein phosphatase 4, regulatory subunit 1	NM_146081|Ppp4r1|70351|protein phosphatase 4, regulatory subunit 1
mm9_v1_chr15_-_34012370_34012404	0.0233939	NKX3-2.p2	
mm9_v1_chrX_-_157432580_157432627	0.0232751	NKX3-2.p2	AK139220|Cdkl5|382253|cyclin-dependent kinase-like 5	AK052380|Cdkl5|382253|cyclin-dependent kinase-like 5	NM_001024624|Cdkl5|382253|cyclin-dependent kinase-like 5
mm9_v1_chr14_+_66456138_66456255	0.0232441	NKX3-2.p2	AK078345|Ccdc25|67179|coiled-coil domain containing 25	NM_145944|Ccdc25|67179|coiled-coil domain containing 25	AK012172|Ccdc25|67179|coiled-coil domain containing 25	AK139180|Ccdc25|67179|coiled-coil domain containing 25	BC025545|Ccdc25|67179|coiled-coil domain containing 25	AK089982|Ccdc25|67179|coiled-coil domain containing 25	AK016286|Ccdc25|67179|coiled-coil domain containing 25	BC148235|Ccdc25|67179|coiled-coil domain containing 25	BC128015|Ccdc25|67179|coiled-coil domain containing 25
mm9_v1_chr2_+_164328123_164328160	0.0232409	NKX3-2.p2	AK177432|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T
mm9_v1_chrX_-_49033640_49033666	0.023196	NKX3-2.p2	AK083281|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	BC063327|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	AK171680|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	NM_015819|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr5_-_42235518_42235530	0.0231915	NKX3-2.p2	AK046296|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK053690|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK134590|Bod1l|665775|biorientation of chromosomes in cell division 1-like
mm9_v1_chr16_+_13671936_13672057	0.0231904	NKX3-2.p2	NM_001177552|Bfar|67118|bifunctional apoptosis regulator	NM_025976|Bfar|67118|bifunctional apoptosis regulator	AK013950|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK041839|Bfar|67118|bifunctional apoptosis regulator
mm9_v1_chr4_-_130037145_130037207	0.0231707	NKX3-2.p2	AJ272345|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK050342|Zcchc17|619605|zinc finger, CCHC domain containing 17	BC049231|Zcchc17|619605|zinc finger, CCHC domain containing 17	AY253297|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK161588|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK152289|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK168912|Zcchc17|619605|zinc finger, CCHC domain containing 17	NM_153160|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK012953|Zcchc17|619605|zinc finger, CCHC domain containing 17
mm9_v1_chr1_-_46910333_46910455	0.0231192	NKX3-2.p2	BC062918|Slc39a10|227059|solute carrier family 39 (zinc transporter), member 10	NM_172653|Slc39a10|227059|solute carrier family 39 (zinc transporter), member 10	BC052880|Slc39a10|227059|solute carrier family 39 (zinc transporter), member 10
mm9_v1_chr11_-_76577079_76577091	0.0231018	NKX3-2.p2	AK147799|Gosr1|53334|golgi SNAP receptor complex member 1	AK154972|Gosr1|53334|golgi SNAP receptor complex member 1
mm9_v1_chr13_-_115078961_115078988	0.0230466	NKX3-2.p2	AK035175|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm9_v1_chr11_-_55233339_55233353	0.02302	NKX3-2.p2	AK003162|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK133377|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK139473|Sparc|20692|secreted acidic cysteine rich glycoprotein	AK146935|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr5_-_143668369_143668395	0.0229787	NKX3-2.p2	BC138611|Actb|11461|actin, beta	BC138614|Actb|11461|actin, beta	AK179836|Actb|11461|actin, beta	AK180740|Actb|11461|actin, beta	AK180898|Actb|11461|actin, beta	AK184086|Actb|11461|actin, beta	AK184228|Actb|11461|actin, beta	AK187727|Actb|11461|actin, beta	J04181|Actb|11461|actin, beta
mm9_v1_chr7_-_54051038_54051113	0.0229255	NKX3-2.p2	AK157182|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AF534396|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AF534397|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AF534399|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AK141088|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AK154612|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)
mm9_v1_chr15_-_95358578_95358610	0.0228866	NKX3-2.p2	AK048913|Nell2|54003|NEL-like 2 (chicken)
mm9_v1_chr11_-_51569907_51570119	0.0228855	NKX3-2.p2	AK163998|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK031553|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK082810|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK162795|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK082478|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK029139|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)	AK155182|Sec24a|77371|Sec24 related gene family, member A (S. cerevisiae)
mm9_v1_chr11_-_106576585_106576603	0.022851	NKX3-2.p2	NM_001032378|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	NM_008816|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr17_+_24625943_24625963	0.022837	NKX3-2.p2	AK129327|Caskin1|268932|CASK interacting protein 1	BC060720|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr13_-_91044959_91044959	0.0227023	NKX3-2.p2	NM_001145879|Atp6ap1l|435376|ATPase, H+ transporting, lysosomal accessory protein 1-like
mm9_v1_chr6_+_63206819_63206850	0.0226593	NKX3-2.p2	AK036192|Grid2|14804|glutamate receptor, ionotropic, delta 2	BC139823|Grid2|14804|glutamate receptor, ionotropic, delta 2	D13266|Grid2|14804|glutamate receptor, ionotropic, delta 2	NM_008167|Grid2|14804|glutamate receptor, ionotropic, delta 2
mm9_v1_chr12_-_112615555_112615701	0.0225216	NKX3-2.p2	BC138035|Cdc42bpb|217866|CDC42 binding protein kinase beta	BC138037|Cdc42bpb|217866|CDC42 binding protein kinase beta	AY277589|Cdc42bpb|217866|CDC42 binding protein kinase beta
mm9_v1_chr10_-_88996314_88996370	0.0223739	NKX3-2.p2	U09417|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_001163504|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4
mm9_v1_chr14_+_31292750_31292775	0.0223296	NKX3-2.p2	AJ344447|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	NM_133761|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chrX_+_135448968_135449043	0.022319	NKX3-2.p2	NM_013724|Nrk|27206|Nik related kinase	AK041377|Nrk|27206|Nik related kinase	BC068311|Nrk|27206|Nik related kinase	AB020741|Nrk|27206|Nik related kinase
mm9_v1_chr10_+_62562532_62562550	0.0223185	NKX3-2.p2	BC092234|Atoh7|53404|atonal homolog 7 (Drosophila)
mm9_v1_chr9_-_118059275_118059324	0.0223159	NKX3-2.p2	AK008567|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	BC048547|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)
mm9_v1_chr14_+_26661614_26661734	0.0221015	NKX3-2.p2	NM_013469|Anxa11|11744|annexin A11	U65986|Anxa11|11744|annexin A11	AK044203|Anxa11|11744|annexin A11	AK140375|Anxa11|11744|annexin A11	AK170850|Anxa11|11744|annexin A11	AK137158|Anxa11|11744|annexin A11	BC012875|Anxa11|11744|annexin A11
mm9_v1_chr7_-_54051250_54051427	0.0220817	NKX3-2.p2	BC082542|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001005247|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001005248|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001167864|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	BC046443|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)
mm9_v1_chr16_-_23029154_23029175	0.022058	NKX3-2.p2	NM_001102409|Kng2|385643|kininogen 2	NM_001102410|Kng2|385643|kininogen 2	NM_201375|Kng2|385643|kininogen 2
mm9_v1_chr1_-_141456740_141456821	0.0220203	NKX3-2.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr8_+_107607652_107607676	0.0219717	NKX3-2.p2	NM_001159415|Ces3b|13909|carboxylesterase 3B	NM_144511|Ces3b|13909|carboxylesterase 3B	BC019147|Ces3b|13909|carboxylesterase 3B	BC010812|Ces3b|13909|carboxylesterase 3B	BC019926|Ces3b|13909|carboxylesterase 3B
mm9_v1_chr19_-_47036782_47036852	0.0219405	NKX3-2.p2	AK008045|Nt5c2|76952|5'-nucleotidase, cytosolic II	AK030786|Nt5c2|76952|5'-nucleotidase, cytosolic II	AK036730|Nt5c2|76952|5'-nucleotidase, cytosolic II	AK038326|Nt5c2|76952|5'-nucleotidase, cytosolic II	AK132384|Nt5c2|76952|5'-nucleotidase, cytosolic II	AK147901|Nt5c2|76952|5'-nucleotidase, cytosolic II	AK169616|Nt5c2|76952|5'-nucleotidase, cytosolic II	NM_029810|Nt5c2|76952|5'-nucleotidase, cytosolic II
mm9_v1_chr3_-_154260022_154260061	0.0218753	NKX3-2.p2	BC087879|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	BC086686|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	BC141040|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	AK034820|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	AK030344|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	NM_001168358|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	NM_172474|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
mm9_v1_chr13_+_45485106_45485325	0.0218629	NKX3-2.p2	AK034887|Mylip|218203|myosin regulatory light chain interacting protein	AK159478|Mylip|218203|myosin regulatory light chain interacting protein	NM_153789|Mylip|218203|myosin regulatory light chain interacting protein	AK171888|Mylip|218203|myosin regulatory light chain interacting protein	BC010206|Mylip|218203|myosin regulatory light chain interacting protein	AY434449|Mylip|218203|myosin regulatory light chain interacting protein	NM_181043|Mylip|218203|myosin regulatory light chain interacting protein
mm9_v1_chr3_-_88754154_88754203	0.0217916	NKX3-2.p2	BC019566|Dap3|65111|death associated protein 3	NM_001164533|Dap3|65111|death associated protein 3	NM_022994|Dap3|65111|death associated protein 3
mm9_v1_chr11_-_70051081_70051130	0.0217253	NKX3-2.p2	
mm9_v1_chr17_-_23810736_23810750	0.0217169	NKX3-2.p2	BC085131|Thoc6|386612|THO complex 6 homolog (Drosophila)	NM_001008425|Thoc6|386612|THO complex 6 homolog (Drosophila)
mm9_v1_chr10_-_119913990_119913990	0.0216641	NKX3-2.p2	NM_010441|Hmga2|15364|high mobility group AT-hook 2
mm9_v1_chr15_+_68758773_68758908	0.0215723	NKX3-2.p2	AF079763|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	AF099092|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	NM_010158|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	AK014353|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	BC057577|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3
mm9_v1_chr11_+_49273182_49273182	0.021561	NKX3-2.p2	NM_146473|Olfr1387|258465|olfactory receptor 1387
mm9_v1_chr7_-_28835041_28835115	0.021535	NKX3-2.p2	BC012708|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167041|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	BC092265|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	L76223|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK150989|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160718|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167528|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169224|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK077507|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160644|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169244|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK050677|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK153991|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	NM_011874|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4
mm9_v1_chr4_+_148960536_148960600	0.0214147	NKX3-2.p2	AK173059|Clstn1|65945|calsyntenin 1
mm9_v1_chr9_-_86589782_86589994	0.0212031	NKX3-2.p2	M26756|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC094028|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC080660|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC003287|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK004980|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK077968|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	J02652|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC011081|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	NM_008615|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic
mm9_v1_chr11_-_23795215_23795279	0.0211787	NKX3-2.p2	BC049163|Papolg|216578|poly(A) polymerase gamma	AK042629|Papolg|216578|poly(A) polymerase gamma	AK139065|Papolg|216578|poly(A) polymerase gamma	AK035810|Papolg|216578|poly(A) polymerase gamma	BC059271|Papolg|216578|poly(A) polymerase gamma	NM_172555|Papolg|216578|poly(A) polymerase gamma
mm9_v1_chr4_+_147822729_147822755	0.0211504	NKX3-2.p2	BC112904|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	BC021454|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	BC043920|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)
mm9_v1_chrX_-_104035877_104035981	0.0211465	NKX3-2.p2	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr2_-_75776467_75776587	0.0211384	NKX3-2.p2	AK147134|Ttc30b|72421|tetratricopeptide repeat domain 30B	AK011097|Ttc30b|72421|tetratricopeptide repeat domain 30B	BC151060|Ttc30b|72421|tetratricopeptide repeat domain 30B	BC151184|Ttc30b|72421|tetratricopeptide repeat domain 30B	NM_028235|Ttc30b|72421|tetratricopeptide repeat domain 30B	BC157929|Ttc30b|72421|tetratricopeptide repeat domain 30B
mm9_v1_chr8_+_126545374_126545424	0.0211008	NKX3-2.p2	AK133906|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm9_v1_chr17_+_24551840_24552094	0.0210062	NKX3-2.p2	X70067|Rnps1|19826|ribonucleic acid binding protein S1	AK206201|Rnps1|19826|ribonucleic acid binding protein S1
mm9_v1_chr14_+_25309968_25309977	0.0209909	NKX3-2.p2	AK167874|Rps24|20088|ribosomal protein S24
mm9_v1_chr19_+_4231881_4231919	0.0209032	NKX3-2.p2	NM_027196|Pold4|69745|polymerase (DNA-directed), delta 4
mm9_v1_chrX_+_102275071_102275146	0.0208445	NKX3-2.p2	AK007655|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	AK030507|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	AK076889|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	NM_026312|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	BC035042|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	AK011610|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	BC061070|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	BC044719|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene
mm9_v1_chr2_+_31101302_31101442	0.0208359	NKX3-2.p2	BC059825|Ncs1|14299|neuronal calcium sensor 1	NM_019681|Ncs1|14299|neuronal calcium sensor 1
mm9_v1_chr19_-_5457470_5457607	0.020768	NKX3-2.p2	BC016659|Ccdc85b|240514|coiled-coil domain containing 85B	BC094592|Ccdc85b|240514|coiled-coil domain containing 85B	BC058411|Ccdc85b|240514|coiled-coil domain containing 85B	NM_198616|Ccdc85b|240514|coiled-coil domain containing 85B
mm9_v1_chr14_+_55502433_55502449	0.0207563	NKX3-2.p2	AK013244|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr5_-_137774729_137774738	0.0206682	NKX3-2.p2	BC046982|Slc12a9|83704|solute carrier family 12 (potassium/chloride transporters), member 9
mm9_v1_chr5_+_104888468_104888623	0.0206678	NKX3-2.p2	BC053058|Pkd2|18764|polycystic kidney disease 2	BC062969|Pkd2|18764|polycystic kidney disease 2	NM_008861|Pkd2|18764|polycystic kidney disease 2	FJ609779|Pkd2|18764|polycystic kidney disease 2	Y13278|Pkd2|18764|polycystic kidney disease 2	AK053502|Pkd2|18764|polycystic kidney disease 2	AF014010|Pkd2|18764|polycystic kidney disease 2	AK164673|Pkd2|18764|polycystic kidney disease 2	AK128961|Pkd2|18764|polycystic kidney disease 2
mm9_v1_chr3_-_129534201_129534313	0.0206492	NKX3-2.p2	BC021873|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	BC048685|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	NM_026578|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)
mm9_v1_chr15_+_81230560_81230633	0.0206085	NKX3-2.p2	AK042110|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	AK158394|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	AK088324|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	NM_177310|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	BC144717|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	BC137569|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative
mm9_v1_chr11_-_17847399_17847495	0.0205638	NKX3-2.p2	AK018594|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr7_+_135047661_135047661	0.0205377	NKX3-2.p2	AK075602|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr3_-_115956312_115956401	0.0205021	NKX3-2.p2	BC029939|Gpr88|64378|G-protein coupled receptor 88	AB042408|Gpr88|64378|G-protein coupled receptor 88	NM_022427|Gpr88|64378|G-protein coupled receptor 88
mm9_v1_chr5_-_114100396_114100423	0.0204053	NKX3-2.p2	U79525|Cmklr1|14747|chemokine-like receptor 1	BC100612|Cmklr1|14747|chemokine-like receptor 1	NM_008153|Cmklr1|14747|chemokine-like receptor 1
mm9_v1_chr2_-_85681945_85681945	0.0202937	NKX3-2.p2	BC117705|Olfr1019|259017|olfactory receptor 1019	BC117706|Olfr1019|259017|olfactory receptor 1019	NM_147015|Olfr1019|259017|olfactory receptor 1019
mm9_v1_chr11_+_3863948_3864033	0.0200638	NKX3-2.p2	AK029075|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	NM_022889|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC004844|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC011142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK088831|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AF289539|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK220142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm9_v1_chr10_+_85763294_85763302	0.02006	NKX3-2.p2	AK082483|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK128943|Timp3|21859|tissue inhibitor of metalloproteinase 3	AB041611|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK083905|Timp3|21859|tissue inhibitor of metalloproteinase 3	AK147847|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr3_-_29912113_29912128	0.0199965	NKX3-2.p2	AK085548|Mecom|14013|MDS1 and EVI1 complex locus	NM_007963|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr6_+_124999988_124999992	0.0199614	NKX3-2.p2	BC114591|Acrbp|54137|proacrosin binding protein	D17573|Acrbp|54137|proacrosin binding protein
mm9_v1_chr13_+_65380103_65380162	0.0198716	NKX3-2.p2	BC036565|Zfp369|170936|zinc finger protein 369	AK082535|Zfp369|170936|zinc finger protein 369	AK084309|Zfp369|170936|zinc finger protein 369	AJ319726|Zfp369|170936|zinc finger protein 369	NM_178364|Zfp369|170936|zinc finger protein 369
mm9_v1_chr12_+_33638809_33638809	0.019853	NKX3-2.p2	BC060971|Sypl|19027|synaptophysin-like protein	NM_013635|Sypl|19027|synaptophysin-like protein
mm9_v1_chr11_-_4965279_4965341	0.0198382	NKX3-2.p2	BC031785|Gas2l1|78926|growth arrest-specific 2 like 1	AK082864|Gas2l1|78926|growth arrest-specific 2 like 1	AK019661|Gas2l1|78926|growth arrest-specific 2 like 1	AK052229|Gas2l1|78926|growth arrest-specific 2 like 1	NM_001190406|Gas2l1|78926|growth arrest-specific 2 like 1	NM_001190408|Gas2l1|78926|growth arrest-specific 2 like 1	NM_030228|Gas2l1|78926|growth arrest-specific 2 like 1	NM_144560|Gas2l1|78926|growth arrest-specific 2 like 1
mm9_v1_chr11_-_97023157_97023169	0.0196305	NKX3-2.p2	BC004096|Kpnb1|16211|karyopherin (importin) beta 1
mm9_v1_chr10_-_80052984_80053104	0.0195273	NKX3-2.p2	BC005632|Fam108a|216169|family with sequence similarity 108, member A	BC082997|Fam108a|216169|family with sequence similarity 108, member A	AK170785|Fam108a|216169|family with sequence similarity 108, member A	NM_145421|Fam108a|216169|family with sequence similarity 108, member A
mm9_v1_chr11_-_84693679_84693786	0.01952	NKX3-2.p2	BC125492|Pigw|70325|phosphatidylinositol glycan anchor biosynthesis, class W	BC144942|Pigw|70325|phosphatidylinositol glycan anchor biosynthesis, class W	AK081337|Pigw|70325|phosphatidylinositol glycan anchor biosynthesis, class W	NM_027388|Pigw|70325|phosphatidylinositol glycan anchor biosynthesis, class W	AK011762|Pigw|70325|phosphatidylinositol glycan anchor biosynthesis, class W	AK086537|Pigw|70325|phosphatidylinositol glycan anchor biosynthesis, class W	NM_001077636|Pigw|70325|phosphatidylinositol glycan anchor biosynthesis, class W
mm9_v1_chr18_-_61885933_61886002	0.0195088	NKX3-2.p2	AF041060|Grpel2|17714|GrpE-like 2, mitochondrial	BC094583|Grpel2|17714|GrpE-like 2, mitochondrial	BC068232|Grpel2|17714|GrpE-like 2, mitochondrial	AK012634|Grpel2|17714|GrpE-like 2, mitochondrial	AK134455|Grpel2|17714|GrpE-like 2, mitochondrial	AK003011|Grpel2|17714|GrpE-like 2, mitochondrial	AK082983|Grpel2|17714|GrpE-like 2, mitochondrial	BC120747|Grpel2|17714|GrpE-like 2, mitochondrial	AK145493|Grpel2|17714|GrpE-like 2, mitochondrial	NM_021296|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chrX_+_147955201_147955234	0.0194901	NKX3-2.p2	AK040969|Phf8|320595|PHD finger protein 8	NM_001113354|Phf8|320595|PHD finger protein 8	NM_177201|Phf8|320595|PHD finger protein 8
mm9_v1_chr2_-_103601232_103601426	0.0194059	NKX3-2.p2	AK149825|Nat10|98956|N-acetyltransferase 10	AK036294|Nat10|98956|N-acetyltransferase 10	AK048552|Nat10|98956|N-acetyltransferase 10	AK040070|Nat10|98956|N-acetyltransferase 10	AK087445|Nat10|98956|N-acetyltransferase 10	BC034516|Nat10|98956|N-acetyltransferase 10	NM_153126|Nat10|98956|N-acetyltransferase 10	AK142682|Nat10|98956|N-acetyltransferase 10	AK054029|Nat10|98956|N-acetyltransferase 10
mm9_v1_chr9_+_21807887_21807962	0.0193803	NKX3-2.p2	AK203731|Prkcsh|19089|protein kinase C substrate 80K-H
mm9_v1_chrX_+_70656434_70656441	0.019369	NKX3-2.p2	U47104|Zfp92|22754|zinc finger protein 92	AK141522|Zfp92|22754|zinc finger protein 92	NM_009566|Zfp92|22754|zinc finger protein 92
mm9_v1_chr11_-_18918923_18918971	0.0192768	NKX3-2.p2	AK032947|Meis1|17268|Meis homeobox 1	AK049720|Meis1|17268|Meis homeobox 1	BC023689|Meis1|17268|Meis homeobox 1	AK168684|Meis1|17268|Meis homeobox 1	AK134321|Meis1|17268|Meis homeobox 1	AK140748|Meis1|17268|Meis homeobox 1	NM_001193271|Meis1|17268|Meis homeobox 1	NM_010789|Meis1|17268|Meis homeobox 1
mm9_v1_chr7_-_31242533_31242670	0.0192507	NKX3-2.p2	AK049284|Kirrel2|243911|kin of IRRE like 2 (Drosophila)	NM_172898|Kirrel2|243911|kin of IRRE like 2 (Drosophila)	AK083069|Kirrel2|243911|kin of IRRE like 2 (Drosophila)
mm9_v1_chr11_-_75346554_75346608	0.0192271	NKX3-2.p2	
mm9_v1_chr10_-_68675679_68675845	0.0192214	NKX3-2.p2	AK084964|A930033H14Rik|320700|RIKEN cDNA A930033H14 gene	AK044689|A930033H14Rik|320700|RIKEN cDNA A930033H14 gene
mm9_v1_chr1_+_17717497_17717562	0.0191087	NKX3-2.p2	AK133870|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1	AK137611|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1	NM_031402|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1	AF329198|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1	AK134273|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1
mm9_v1_chr14_-_64162509_64162554	0.0189907	NKX3-2.p2	BC145946|Mtmr9|210376|myotubularin related protein 9	BC145948|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr11_+_75345598_75345772	0.0189702	NKX3-2.p2	AK171104|Slc43a2|215113|solute carrier family 43, member 2	AK172685|Slc43a2|215113|solute carrier family 43, member 2	AK159144|Slc43a2|215113|solute carrier family 43, member 2	AK165721|Slc43a2|215113|solute carrier family 43, member 2	AK090207|Slc43a2|215113|solute carrier family 43, member 2	AK143773|Slc43a2|215113|solute carrier family 43, member 2
mm9_v1_chr10_-_105011439_105011534	0.0188907	NKX3-2.p2	BC092226|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK052344|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK135552|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	NM_177368|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chr18_-_38498564_38498663	0.018883	NKX3-2.p2	BC014800|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AK084247|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AF160355|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AK080610|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AK166069|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AF088903|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	NM_011937|Gnpda1|26384|glucosamine-6-phosphate deaminase 1
mm9_v1_chr5_+_20930720_20930881	0.0188738	NKX3-2.p2	NM_177869|Fam185a|330050|family with sequence similarity 185, member A	AK030922|Fam185a|330050|family with sequence similarity 185, member A	AK076256|Fam185a|330050|family with sequence similarity 185, member A	BC055342|Fam185a|330050|family with sequence similarity 185, member A
mm9_v1_chr6_-_85865600_85865670	0.0188634	NKX3-2.p2	BC010796|Cml1|66116|camello-like 1	AK003301|Cml1|66116|camello-like 1	AF163314|Cml1|66116|camello-like 1	NM_023160|Cml1|66116|camello-like 1
mm9_v1_chr9_-_39808834_39808834	0.0188455	NKX3-2.p2	BC116754|Olfr979|259112|olfactory receptor 979	BC116756|Olfr979|259112|olfactory receptor 979	NM_147108|Olfr979|259112|olfactory receptor 979
mm9_v1_chr7_-_148086285_148086315	0.0188096	NKX3-2.p2	AK003116|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	BC027531|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	U15541|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	BC086930|Cox8b|12869|cytochrome c oxidase, subunit VIIIb
mm9_v1_chr1_-_75475845_75475926	0.0188021	NKX3-2.p2	BC071273|Chpf|74241|chondroitin polymerizing factor	BC057050|Chpf|74241|chondroitin polymerizing factor	BC060598|Chpf|74241|chondroitin polymerizing factor
mm9_v1_chr15_+_83610434_83610456	0.0186702	NKX3-2.p2	AK048421|Mpped1|223726|metallophosphoesterase domain containing 1	NM_172610|Mpped1|223726|metallophosphoesterase domain containing 1
mm9_v1_chr11_-_70626060_70626062	0.0186225	NKX3-2.p2	BC147177|A430084P05Rik|327957|RIKEN cDNA A430084P05 gene	BC147178|A430084P05Rik|327957|RIKEN cDNA A430084P05 gene	BC172005|A430084P05Rik|327957|RIKEN cDNA A430084P05 gene	AK138818|A430084P05Rik|327957|RIKEN cDNA A430084P05 gene	NM_001045526|A430084P05Rik|327957|RIKEN cDNA A430084P05 gene
mm9_v1_chr7_+_52825672_52825751	0.0185917	NKX3-2.p2	AK037482|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	AF031467|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC048072|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	NM_009737|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	U68526|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC017688|Bcat2|12036|branched chain aminotransferase 2, mitochondrial
mm9_v1_chr17_-_36053309_36053350	0.0185743	NKX3-2.p2	AK088540|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK167067|Mrps18b|66973|mitochondrial ribosomal protein S18B	BC021752|Mrps18b|66973|mitochondrial ribosomal protein S18B	NM_025878|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK010250|Mrps18b|66973|mitochondrial ribosomal protein S18B	AB049954|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK168140|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK002554|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK076033|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK076044|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK166597|Mrps18b|66973|mitochondrial ribosomal protein S18B
mm9_v1_chr9_-_54349377_54349403	0.0185277	NKX3-2.p2	AK032099|Dmxl2|235380|Dmx-like 2
mm9_v1_chr9_+_38655700_38655700	0.0184804	NKX3-2.p2	BC143111|Olfr924|404322|olfactory receptor 924	BC143129|Olfr924|404322|olfactory receptor 924	BC143156|Olfr924|404322|olfactory receptor 924	BC143208|Olfr924|404322|olfactory receptor 924	NM_207560|Olfr924|404322|olfactory receptor 924
mm9_v1_chr9_-_121748578_121748578	0.0184007	NKX3-2.p2	NM_028384|Ccdc13|434446|coiled-coil domain containing 13
mm9_v1_chr10_-_93498482_93498486	0.0183058	NKX3-2.p2	AK042540|Vezt|215008|vezatin, adherens junctions transmembrane protein
mm9_v1_chr10_-_126558035_126558203	0.0182857	NKX3-2.p2	BC006844|Os9|216440|amplified in osteosarcoma	BC031768|Os9|216440|amplified in osteosarcoma	AK028047|Os9|216440|amplified in osteosarcoma
mm9_v1_chr14_-_58283787_58283830	0.0182555	NKX3-2.p2	AK129430|Xpo4|57258|exportin 4	AF145021|Xpo4|57258|exportin 4	NM_020506|Xpo4|57258|exportin 4	AK163558|Xpo4|57258|exportin 4	AK084907|Xpo4|57258|exportin 4
mm9_v1_chr12_+_59312790_59312790	0.0182436	NKX3-2.p2	AK046464|Sstr1|20605|somatostatin receptor 1	NM_009216|Sstr1|20605|somatostatin receptor 1
mm9_v1_chr19_+_4711207_4711210	0.0182185	NKX3-2.p2	AK147671|Spnb3|20743|spectrin beta 3
mm9_v1_chr2_+_32218707_32218872	0.0182032	NKX3-2.p2	AK089986|Ciz1|68379|CDKN1A interacting zinc finger protein 1	AK159103|Ciz1|68379|CDKN1A interacting zinc finger protein 1	BC018483|Ciz1|68379|CDKN1A interacting zinc finger protein 1	NM_028412|Ciz1|68379|CDKN1A interacting zinc finger protein 1	BC072624|Ciz1|68379|CDKN1A interacting zinc finger protein 1
mm9_v1_chr1_+_9591492_9591529	0.0180953	NKX3-2.p2	AK043576|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr18_+_37839910_37840111	0.0180642	NKX3-2.p2	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr15_-_76180500_76180651	0.0180563	NKX3-2.p2	AK178398|Sharpin|106025|SHANK-associated RH domain interacting protein
mm9_v1_chr3_-_63768461_63768654	0.0180486	NKX3-2.p2	AK144703|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	AK135092|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	BC063104|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	AK136323|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	BC054395|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	NM_015728|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1
mm9_v1_chr16_-_96304116_96304132	0.0180086	NKX3-2.p2	BC056618|Brwd1|93871|bromodomain and WD repeat domain containing 1
mm9_v1_chr9_-_65756482_65756602	0.0179821	NKX3-2.p2	AF539614|Trip4|56404|thyroid hormone receptor interactor 4	AK016170|Trip4|56404|thyroid hormone receptor interactor 4	AK139423|Trip4|56404|thyroid hormone receptor interactor 4	AK166192|Trip4|56404|thyroid hormone receptor interactor 4	NM_019797|Trip4|56404|thyroid hormone receptor interactor 4
mm9_v1_chr11_-_63892874_63892978	0.0179576	NKX3-2.p2	AK213695|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC038046|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC018301|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK149999|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK171661|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK010385|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK154668|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK156865|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK172718|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	NM_178379|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
mm9_v1_chr16_+_48816968_48817099	0.0178838	NKX3-2.p2	AF290871|Retnlb|57263|resistin like beta	NM_023881|Retnlb|57263|resistin like beta	AK020240|Retnlb|57263|resistin like beta	AF323083|Retnlb|57263|resistin like beta	BC022650|Retnlb|57263|resistin like beta
mm9_v1_chr17_-_46169322_46169332	0.0178581	NKX3-2.p2	NM_001025250|Vegfa|22339|vascular endothelial growth factor A	NM_001025257|Vegfa|22339|vascular endothelial growth factor A	NM_009505|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr4_+_126850123_126850181	0.0178422	NKX3-2.p2	AK158868|Dlgap3|242667|discs, large (Drosophila) homolog-associated protein 3
mm9_v1_chr7_+_88138537_88138597	0.0177942	NKX3-2.p2	AK042675|Zfp592|233410|zinc finger protein 592	NM_178707|Zfp592|233410|zinc finger protein 592	AK143618|Zfp592|233410|zinc finger protein 592	AK129089|Zfp592|233410|zinc finger protein 592
mm9_v1_chr4_+_98062481_98062582	0.0177522	NKX3-2.p2	AK147866|Inadl|12695|InaD-like (Drosophila)	NM_001005784|Inadl|12695|InaD-like (Drosophila)	NM_172696|Inadl|12695|InaD-like (Drosophila)	BC141404|Inadl|12695|InaD-like (Drosophila)	AK050545|Inadl|12695|InaD-like (Drosophila)	BC050846|Inadl|12695|InaD-like (Drosophila)
mm9_v1_chr5_+_31117077_31117214	0.0177345	NKX3-2.p2	BC048833|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AF468005|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	BC057918|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	NM_133350|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AK177097|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr8_-_87502592_87502646	0.0176808	NKX3-2.p2	X54332|Junb|16477|Jun-B oncogene	BC092302|Junb|16477|Jun-B oncogene	BC003790|Junb|16477|Jun-B oncogene	AK155043|Junb|16477|Jun-B oncogene	AK150286|Junb|16477|Jun-B oncogene	AK156596|Junb|16477|Jun-B oncogene	AK159140|Junb|16477|Jun-B oncogene	AK159661|Junb|16477|Jun-B oncogene	AK088643|Junb|16477|Jun-B oncogene	AK141592|Junb|16477|Jun-B oncogene	AK144871|Junb|16477|Jun-B oncogene	AK145550|Junb|16477|Jun-B oncogene	AK149794|Junb|16477|Jun-B oncogene	AK150111|Junb|16477|Jun-B oncogene	AK150247|Junb|16477|Jun-B oncogene	AK159083|Junb|16477|Jun-B oncogene	AK159520|Junb|16477|Jun-B oncogene	AK160066|Junb|16477|Jun-B oncogene	NM_008416|Junb|16477|Jun-B oncogene	J03236|Junb|16477|Jun-B oncogene
mm9_v1_chr11_-_70783381_70783420	0.0176716	NKX3-2.p2	AK139738|Nup88|19069|nucleoporin 88
mm9_v1_chr15_-_80094668_80094751	0.0176645	NKX3-2.p2	BC065381|Rps19bp1|66538|ribosomal protein S19 binding protein 1	AK075974|Rps19bp1|66538|ribosomal protein S19 binding protein 1	AK010954|Rps19bp1|66538|ribosomal protein S19 binding protein 1	BC038691|Rps19bp1|66538|ribosomal protein S19 binding protein 1	BC050115|Rps19bp1|66538|ribosomal protein S19 binding protein 1	AB233218|Rps19bp1|66538|ribosomal protein S19 binding protein 1	NM_175109|Rps19bp1|66538|ribosomal protein S19 binding protein 1
mm9_v1_chr7_+_129432585_129432762	0.0176557	NKX3-2.p2	NM_008855|Prkcb|18751|protein kinase C, beta	AK051862|Prkcb|18751|protein kinase C, beta
mm9_v1_chr6_+_115803545_115803666	0.0176028	NKX3-2.p2	NM_001167763|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	NM_031177|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK044456|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167330|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167412|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC060621|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK131115|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC066083|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC067415|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK031308|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)
mm9_v1_chr11_+_104987738_104987813	0.0175906	NKX3-2.p2	AK048040|Mettl2|52686|methyltransferase like 2	NM_172567|Mettl2|52686|methyltransferase like 2	AK030739|Mettl2|52686|methyltransferase like 2	AK133887|Mettl2|52686|methyltransferase like 2	BC089591|Mettl2|52686|methyltransferase like 2	AK153431|Mettl2|52686|methyltransferase like 2
mm9_v1_chr15_-_39775498_39775574	0.0175876	NKX3-2.p2	BC058345|Lrp12|239393|low density lipoprotein-related protein 12
mm9_v1_chr16_-_21947587_21947627	0.0175643	NKX3-2.p2	AK013518|Tmem41a|66664|transmembrane protein 41a	BC011512|Tmem41a|66664|transmembrane protein 41a	AK007685|Tmem41a|66664|transmembrane protein 41a	NM_025693|Tmem41a|66664|transmembrane protein 41a
mm9_v1_chr11_-_51420336_51420404	0.0175085	NKX3-2.p2	BC043069|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	D90151|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	L36663|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK076132|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK013384|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK013709|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK165609|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	NM_001048061|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	NM_010448|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr6_-_85819035_85819112	0.0174322	NKX3-2.p2	AK050449|Cml2|93673|camello-like 2	AF163315|Cml2|93673|camello-like 2
mm9_v1_chr8_-_95803605_95803656	0.0173984	NKX3-2.p2	BC013479|Ces1f|234564|carboxylesterase 1F	AK136491|Ces1f|234564|carboxylesterase 1F	NM_144930|Ces1f|234564|carboxylesterase 1F
mm9_v1_chr2_-_129525512_129525673	0.0172745	NKX3-2.p2	BC137571|Pdyn|18610|prodynorphin	BC137572|Pdyn|18610|prodynorphin	AF026537|Pdyn|18610|prodynorphin	AK133597|Pdyn|18610|prodynorphin
mm9_v1_chr6_+_126889979_126890004	0.0172688	NKX3-2.p2	AK037095|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK045541|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	NM_138594|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK043521|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK137201|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK042976|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK046707|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed
mm9_v1_chr8_+_47060860_47060925	0.0172098	NKX3-2.p2	AK078309|Ufsp2|192169|UFM1-specific peptidase 2	AK075795|Ufsp2|192169|UFM1-specific peptidase 2	AK160164|Ufsp2|192169|UFM1-specific peptidase 2	BC005503|Ufsp2|192169|UFM1-specific peptidase 2	NM_138668|Ufsp2|192169|UFM1-specific peptidase 2
mm9_v1_chr17_-_25969869_25969905	0.017203	NKX3-2.p2	AK166630|Stub1|56424|STIP1 homology and U-Box containing protein 1	AK158595|Stub1|56424|STIP1 homology and U-Box containing protein 1
mm9_v1_chr10_+_128227964_128228056	0.0171783	NKX3-2.p2	AK079924|Mmp19|58223|matrix metallopeptidase 19	NM_001164197|Mmp19|58223|matrix metallopeptidase 19	AK080125|Mmp19|58223|matrix metallopeptidase 19	AK136517|Mmp19|58223|matrix metallopeptidase 19	NM_021412|Mmp19|58223|matrix metallopeptidase 19	AK154863|Mmp19|58223|matrix metallopeptidase 19	AF155221|Mmp19|58223|matrix metallopeptidase 19	AF162446|Mmp19|58223|matrix metallopeptidase 19	BC112966|Mmp19|58223|matrix metallopeptidase 19	AF153199|Mmp19|58223|matrix metallopeptidase 19
mm9_v1_chr9_-_114843103_114843123	0.0171299	NKX3-2.p2	NM_175380|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like
mm9_v1_chr16_+_16870824_16870856	0.0171021	NKX3-2.p2	AK041159|Top3b|21976|topoisomerase (DNA) III beta	AK144709|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chrX_-_11737471_11737480	0.0170697	NKX3-2.p2	BC027704|2900008C10Rik|72937|RIKEN cDNA 2900008C10 gene	AK129398|Bcor|71458|BCL6 interacting corepressor	NM_001168321|Bcor|71458|BCL6 interacting corepressor
mm9_v1_chr10_-_80630456_80630508	0.0170582	NKX3-2.p2	AK131903|Pias4|59004|protein inhibitor of activated STAT 4	AK076943|Pias4|59004|protein inhibitor of activated STAT 4	BC025159|Pias4|59004|protein inhibitor of activated STAT 4	NM_021501|Pias4|59004|protein inhibitor of activated STAT 4	AK131822|Pias4|59004|protein inhibitor of activated STAT 4	AK148066|Pias4|59004|protein inhibitor of activated STAT 4	AK147813|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr14_-_60705571_60705718	0.0170503	NKX3-2.p2	BC137896|Atp8a2|50769|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	AF156550|Atp8a2|50769|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	NM_015803|Atp8a2|50769|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	AK051437|Atp8a2|50769|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm9_v1_chr7_-_106289651_106289675	0.0170369	NKX3-2.p2	NM_178635|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr4_-_140609574_140609606	0.0170185	NKX3-2.p2	AF527975|Crocc|230872|ciliary rootlet coiled-coil, rootletin	NM_172122|Crocc|230872|ciliary rootlet coiled-coil, rootletin
mm9_v1_chr19_+_10680032_10680173	0.0169572	NKX3-2.p2	AK155020|Ddb1|13194|damage specific DNA binding protein 1	AK157491|Ddb1|13194|damage specific DNA binding protein 1	AK152228|Ddb1|13194|damage specific DNA binding protein 1	AK146522|Ddb1|13194|damage specific DNA binding protein 1	AK155920|Ddb1|13194|damage specific DNA binding protein 1	AK154303|Ddb1|13194|damage specific DNA binding protein 1	AB026432|Ddb1|13194|damage specific DNA binding protein 1	NM_015735|Ddb1|13194|damage specific DNA binding protein 1	AK145328|Ddb1|13194|damage specific DNA binding protein 1	BC009661|Ddb1|13194|damage specific DNA binding protein 1	AF159853|Ddb1|13194|damage specific DNA binding protein 1
mm9_v1_chr7_+_116662707_116662716	0.016931	NKX3-2.p2	NM_011975|Rpl27a|26451|ribosomal protein L27A	AK138110|Rpl27a|26451|ribosomal protein L27A	AK007837|Rpl27a|26451|ribosomal protein L27A	AK010286|Rpl27a|26451|ribosomal protein L27A	AK167792|Rpl27a|26451|ribosomal protein L27A	AK011361|Rpl27a|26451|ribosomal protein L27A	AK150907|Rpl27a|26451|ribosomal protein L27A	BC086939|Rpl27a|26451|ribosomal protein L27A	AK008531|Rpl27a|26451|ribosomal protein L27A	AK167915|Rpl27a|26451|ribosomal protein L27A	X05021|Rpl27a|26451|ribosomal protein L27A
mm9_v1_chr8_+_89997055_89997060	0.0169304	NKX3-2.p2	AK082312|C230036H16Rik|434335|RIKEN cDNA C230036H16 gene
mm9_v1_chr6_+_56952293_56952348	0.0169239	NKX3-2.p2	BC125532|Vmn1r6|171193|vomeronasal 1 receptor 6	BC125534|Vmn1r6|171193|vomeronasal 1 receptor 6	NM_134175|Vmn1r6|171193|vomeronasal 1 receptor 6
mm9_v1_chr17_+_15533165_15533243	0.0168988	NKX3-2.p2	BC066088|Fam120b|67544|family with sequence similarity 120, member B	NM_024203|Fam120b|67544|family with sequence similarity 120, member B	BC085163|Fam120b|67544|family with sequence similarity 120, member B	AK078215|Fam120b|67544|family with sequence similarity 120, member B	AK161912|Fam120b|67544|family with sequence similarity 120, member B	AK051767|Fam120b|67544|family with sequence similarity 120, member B	DQ873694|Fam120b|67544|family with sequence similarity 120, member B	AK132211|Fam120b|67544|family with sequence similarity 120, member B	AK016568|Fam120b|67544|family with sequence similarity 120, member B	AK076185|Fam120b|67544|family with sequence similarity 120, member B
mm9_v1_chr2_+_32143820_32143845	0.0168805	NKX3-2.p2	AK220509|Golga2|99412|golgi autoantigen, golgin subfamily a, 2
mm9_v1_chr8_+_56040445_56040534	0.01687	NKX3-2.p2	BC029683|Gpm6a|234267|glycoprotein m6a	BC033357|Gpm6a|234267|glycoprotein m6a	AK053538|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr1_-_133096633_133096765	0.0168576	NKX3-2.p2	AK131147|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AY261333|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AK088751|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AK170703|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AK155869|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5
mm9_v1_chr8_+_107872157_107872157	0.0167635	NKX3-2.p2	NM_001081332|Slc9a5|277973|solute carrier family 9 (sodium/hydrogen exchanger), member 5
mm9_v1_chr11_-_101285982_101286065	0.0167072	NKX3-2.p2	BC141198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr14_-_104243541_104243687	0.0166561	NKX3-2.p2	BC026553|Ednrb|13618|endothelin receptor type B
mm9_v1_chr16_-_15594566_15594585	0.0166393	NKX3-2.p2	BC029742|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	BC094903|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	BC044722|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	AK031233|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	AK019486|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	AK146073|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	BC058374|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	AK028472|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	BC083098|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2
mm9_v1_chrX_+_126284271_126284381	0.0166168	NKX3-2.p2	AK153986|Diap2|54004|diaphanous homolog 2 (Drosophila)	NM_172493|Diap2|54004|diaphanous homolog 2 (Drosophila)	AK088648|Diap2|54004|diaphanous homolog 2 (Drosophila)	AY312280|Diap2|54004|diaphanous homolog 2 (Drosophila)	BC100759|Diap2|54004|diaphanous homolog 2 (Drosophila)
mm9_v1_chr17_-_49703586_49703636	0.0166073	NKX3-2.p2	AK162940|Daam2|76441|dishevelled associated activator of morphogenesis 2
mm9_v1_chrX_+_71550301_71550377	0.0165892	NKX3-2.p2	NM_010273|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1
mm9_v1_chr15_-_94234778_94234782	0.0165066	NKX3-2.p2	AK145288|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	NM_001164785|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	NM_001164786|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	NM_177431|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
mm9_v1_chr11_+_97223739_97223783	0.0164383	NKX3-2.p2	AK147580|Socs7|192157|suppressor of cytokine signaling 7	AK147650|Socs7|192157|suppressor of cytokine signaling 7
mm9_v1_chr6_-_85819124_85819161	0.0164342	NKX3-2.p2	NM_053096|Cml2|93673|camello-like 2	BC039773|Cml2|93673|camello-like 2
mm9_v1_chr14_-_41998434_41998486	0.0163929	NKX3-2.p2	BC012896|Sftpd|20390|surfactant associated protein D	BC003705|Sftpd|20390|surfactant associated protein D	NM_009160|Sftpd|20390|surfactant associated protein D
mm9_v1_chr6_+_113187821_113187914	0.0163892	NKX3-2.p2	NM_026849|Mtmr14|97287|myotubularin related protein 14	AK161445|Mtmr14|97287|myotubularin related protein 14	BC018294|Mtmr14|97287|myotubularin related protein 14	AK034867|Mtmr14|97287|myotubularin related protein 14
mm9_v1_chr15_+_10994444_10994583	0.0163535	NKX3-2.p2	AK145096|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK135354|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	NM_175501|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK054015|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK048612|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm9_v1_chr6_+_34730416_34730462	0.0163425	NKX3-2.p2	AK029793|Agbl3|76223|ATP/GTP binding protein-like 3	DQ867031|Agbl3|76223|ATP/GTP binding protein-like 3	DQ867032|Agbl3|76223|ATP/GTP binding protein-like 3	NM_178630|Agbl3|76223|ATP/GTP binding protein-like 3	AK054066|Agbl3|76223|ATP/GTP binding protein-like 3	AK018326|Agbl3|76223|ATP/GTP binding protein-like 3
mm9_v1_chr10_-_39966784_39966854	0.0163398	NKX3-2.p2	AK051135|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	NM_001042556|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK020030|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AB041810|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK017678|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK013395|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK011644|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK012641|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK010776|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK012188|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	NM_023323|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)
mm9_v1_chr15_+_81297235_81297246	0.0163215	NKX3-2.p2	AK149259|Rbx1|56438|ring-box 1
mm9_v1_chr18_-_44821919_44821954	0.0162931	NKX3-2.p2	AK054528|Mcc|328949|mutated in colorectal cancers	NM_001085374|Mcc|328949|mutated in colorectal cancers	AK086823|Mcc|328949|mutated in colorectal cancers
mm9_v1_chr4_-_116228531_116228547	0.0162891	NKX3-2.p2	AK041960|Tmem69|230657|transmembrane protein 69	BC106178|Tmem69|230657|transmembrane protein 69	NM_177670|Tmem69|230657|transmembrane protein 69
mm9_v1_chr15_+_74346835_74346839	0.0162204	NKX3-2.p2	AK147494|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr2_-_102241053_102241195	0.0162191	NKX3-2.p2	AJ278191|Trim44|80985|tripartite motif-containing 44	NM_020267|Trim44|80985|tripartite motif-containing 44
mm9_v1_chr1_+_166237784_166237874	0.0161953	NKX3-2.p2	AK144915|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_138314|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_178071|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK043515|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK085222|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK164652|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK044962|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC038021|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC049225|Nme7|171567|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
mm9_v1_chr6_+_124662272_124662375	0.0161406	NKX3-2.p2	AK158423|Phb2|12034|prohibitin 2	NM_007531|Phb2|12034|prohibitin 2	AK151952|Phb2|12034|prohibitin 2	AK152375|Phb2|12034|prohibitin 2	AK153368|Phb2|12034|prohibitin 2	AK132058|Phb2|12034|prohibitin 2	AK002334|Phb2|12034|prohibitin 2	AK011107|Phb2|12034|prohibitin 2	AK132052|Phb2|12034|prohibitin 2	AY211613|Phb2|12034|prohibitin 2	X78683|Phb2|12034|prohibitin 2	AK090088|Phb2|12034|prohibitin 2	BC145875|Phb2|12034|prohibitin 2
mm9_v1_chr17_+_35263978_35264059	0.01614	NKX3-2.p2	BC138707|D17H6S53E|114585|DNA segment, Chr 17, human D6S53E	BC138708|D17H6S53E|114585|DNA segment, Chr 17, human D6S53E	NM_033477|D17H6S53E|114585|DNA segment, Chr 17, human D6S53E
mm9_v1_chr1_+_173433762_173433787	0.0160848	NKX3-2.p2	AJ252141|Refbp2|56009|RNA and export factor binding protein 2
mm9_v1_chr5_+_22056208_22056261	0.0160821	NKX3-2.p2	AK006545|1700030G06Rik|69507|RIKEN cDNA 1700030G06 gene	AK029857|6030443J06Rik|320719|RIKEN cDNA 6030443J06 gene	AK044020|1700030G06Rik|69507|RIKEN cDNA 1700030G06 gene	AK030448|6030443J06Rik|320719|RIKEN cDNA 6030443J06 gene
mm9_v1_chrX_-_133275812_133275890	0.0160444	NKX3-2.p2	AK089963|Morf4l2|56397|mortality factor 4 like 2	AK153146|Morf4l2|56397|mortality factor 4 like 2	AK075946|Morf4l2|56397|mortality factor 4 like 2	AK131944|Morf4l2|56397|mortality factor 4 like 2	AK145686|Morf4l2|56397|mortality factor 4 like 2	AK150401|Morf4l2|56397|mortality factor 4 like 2	AK150670|Morf4l2|56397|mortality factor 4 like 2	AK151570|Morf4l2|56397|mortality factor 4 like 2	AK159179|Morf4l2|56397|mortality factor 4 like 2	AK160012|Morf4l2|56397|mortality factor 4 like 2	AK164433|Morf4l2|56397|mortality factor 4 like 2	AK165985|Morf4l2|56397|mortality factor 4 like 2	AK159145|Morf4l2|56397|mortality factor 4 like 2	NM_001168226|Morf4l2|56397|mortality factor 4 like 2	NM_001168229|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr4_-_120770603_120770864	0.0159835	NKX3-2.p2	AY029194|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	BC138578|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	BC023740|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	AK170946|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	AJ487544|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	AK083566|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	NM_172700|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)
mm9_v1_chr11_-_5641118_5641138	0.0158194	NKX3-2.p2	
mm9_v1_chr9_+_14589080_14589119	0.0158103	NKX3-2.p2	U58987|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	U60318|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK168208|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK146234|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK146370|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK168180|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)
mm9_v1_chr11_-_3427914_3427958	0.0157536	NKX3-2.p2	AK009426|Smtn|29856|smoothelin
mm9_v1_chr2_-_164630347_164630363	0.0156852	NKX3-2.p2	AK033724|Acot8|170789|acyl-CoA thioesterase 8	BC005792|Acot8|170789|acyl-CoA thioesterase 8	AK151924|Acot8|170789|acyl-CoA thioesterase 8
mm9_v1_chr10_+_122116066_122116255	0.0156558	NKX3-2.p2	AK040194|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK029461|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK150309|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)
mm9_v1_chr11_-_108205158_108205183	0.0156244	NKX3-2.p2	X52684|Prkca|18750|protein kinase C, alpha	X52685|Prkca|18750|protein kinase C, alpha
mm9_v1_chr7_-_13864014_13864069	0.0155287	NKX3-2.p2	AK028865|6330408A02Rik|321008|RIKEN cDNA 6330408A02 gene	AK018141|6330408A02Rik|321008|RIKEN cDNA 6330408A02 gene	AK162673|6330408A02Rik|321008|RIKEN cDNA 6330408A02 gene	NM_177312|6330408A02Rik|321008|RIKEN cDNA 6330408A02 gene
mm9_v1_chr17_-_23923163_23923198	0.0154945	NKX3-2.p2	BC024947|Flywch2|76917|FLYWCH family member 2
mm9_v1_chr2_-_105229165_105229175	0.0154885	NKX3-2.p2	AK179954|Rcn1|19672|reticulocalbin 1
mm9_v1_chr8_+_108535363_108535459	0.0154573	NKX3-2.p2	AK009391|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)	AK077451|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)	NM_025518|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)	BC116934|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)	BC116936|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)
mm9_v1_chr10_+_12810593_12810650	0.0154516	NKX3-2.p2	BC065150|Plagl1|22634|pleiomorphic adenoma gene-like 1	NM_009538|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142210|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142052|Plagl1|22634|pleiomorphic adenoma gene-like 1
mm9_v1_chr2_+_80457201_80457422	0.0153871	NKX3-2.p2	AF237618|Dusp19|68082|dual specificity phosphatase 19	NM_024438|Dusp19|68082|dual specificity phosphatase 19	AK010127|Dusp19|68082|dual specificity phosphatase 19	AK077871|Dusp19|68082|dual specificity phosphatase 19	AK170170|Dusp19|68082|dual specificity phosphatase 19	AK018369|Dusp19|68082|dual specificity phosphatase 19	AB051896|Dusp19|68082|dual specificity phosphatase 19	AK049927|Dusp19|68082|dual specificity phosphatase 19	AB038769|Dusp19|68082|dual specificity phosphatase 19	BC021591|Dusp19|68082|dual specificity phosphatase 19	AK083610|Dusp19|68082|dual specificity phosphatase 19
mm9_v1_chr12_-_4484059_4484074	0.0152901	NKX3-2.p2	NM_010881|Ncoa1|17977|nuclear receptor coactivator 1
mm9_v1_chr4_+_104830022_104830255	0.0152868	NKX3-2.p2	AK160056|Ppap2b|67916|phosphatidic acid phosphatase type 2B	AK076183|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr10_-_57252251_57252251	0.0152451	NKX3-2.p2	AK135359|Serinc1|56442|serine incorporator 1
mm9_v1_chr16_+_96422285_96422310	0.0152418	NKX3-2.p2	AJ239082|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein
mm9_v1_chr3_+_95463691_95463776	0.0152415	NKX3-2.p2	AK010424|Mcl1|17210|myeloid cell leukemia sequence 1	AK160594|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr8_-_87356112_87356159	0.015173	NKX3-2.p2	AK143395|Dand5|23863|DAN domain family, member 5
mm9_v1_chr10_-_112365976_112366087	0.0150998	NKX3-2.p2	AK014824|Atxn7l3b|382423|ataxin 7-like 3B	BC058561|Atxn7l3b|382423|ataxin 7-like 3B	BC047210|Atxn7l3b|382423|ataxin 7-like 3B	BC079579|Atxn7l3b|382423|ataxin 7-like 3B	BC094390|Atxn7l3b|382423|ataxin 7-like 3B	BC030168|Atxn7l3b|382423|ataxin 7-like 3B	AK003631|Atxn7l3b|382423|ataxin 7-like 3B	AK150316|Atxn7l3b|382423|ataxin 7-like 3B	AK135540|Atxn7l3b|382423|ataxin 7-like 3B	AK011696|Atxn7l3b|382423|ataxin 7-like 3B	AK009409|Atxn7l3b|382423|ataxin 7-like 3B	NM_001033474|Atxn7l3b|382423|ataxin 7-like 3B
mm9_v1_chr2_-_152655725_152655826	0.0149294	NKX3-2.p2	U10100|Bcl2l1|12048|BCL2-like 1	U10101|Bcl2l1|12048|BCL2-like 1	X83574|Bcl2l1|12048|BCL2-like 1	BC089017|Bcl2l1|12048|BCL2-like 1	U51278|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr17_+_56125891_56125974	0.0149268	NKX3-2.p2	AK140132|Fsd1|240121|fibronectin type 3 and SPRY domain-containing protein	BC055106|Fsd1|240121|fibronectin type 3 and SPRY domain-containing protein	NM_183178|Fsd1|240121|fibronectin type 3 and SPRY domain-containing protein	AK144257|Fsd1|240121|fibronectin type 3 and SPRY domain-containing protein
mm9_v1_chr8_+_87604638_87604668	0.014868	NKX3-2.p2	AK147129|BC056474|414077|cDNA sequence BC056474
mm9_v1_chr9_-_44076207_44076269	0.0148434	NKX3-2.p2	AK170088|Nlrx1|270151|NLR family member X1	AK089260|Nlrx1|270151|NLR family member X1	AK145780|Nlrx1|270151|NLR family member X1	NM_001163743|Nlrx1|270151|NLR family member X1
mm9_v1_chrX_+_133584130_133584209	0.014811	NKX3-2.p2	AK154624|Fam199x|245622|family with sequence similarity 199, X-linked	NM_146261|Fam199x|245622|family with sequence similarity 199, X-linked	BC031748|Fam199x|245622|family with sequence similarity 199, X-linked	AK039695|Fam199x|245622|family with sequence similarity 199, X-linked
mm9_v1_chr11_-_6100141_6100160	0.0148026	NKX3-2.p2	BC037090|Nudcd3|209586|NudC domain containing 3	AK050476|Nudcd3|209586|NudC domain containing 3	EU350933|Nudcd3|209586|NudC domain containing 3	AK036694|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr17_-_25969644_25969733	0.0147423	NKX3-2.p2	AK183097|Stub1|56424|STIP1 homology and U-Box containing protein 1	AK209265|Stub1|56424|STIP1 homology and U-Box containing protein 1
mm9_v1_chr9_+_117161650_117161701	0.0146476	NKX3-2.p2	
mm9_v1_chr4_-_57156490_57156519	0.0146268	NKX3-2.p2	AB032366|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr17_-_45798447_45798582	0.0145038	NKX3-2.p2	AK208427|Tmem63b|224807|transmembrane protein 63b	AK217033|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr13_+_105019025_105019034	0.0144706	NKX3-2.p2	AK082939|Cenpk|60411|centromere protein K	NM_181061|Cenpk|60411|centromere protein K
mm9_v1_chr12_-_42212337_42212337	0.014385	NKX3-2.p2	BC069041|Lrrn3|16981|leucine rich repeat protein 3, neuronal	NM_010733|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chrX_-_101176600_101176631	0.0141867	NKX3-2.p2	AK013207|Rlim|19820|ring finger protein, LIM domain interacting	AK029295|Rlim|19820|ring finger protein, LIM domain interacting	AK163276|Rlim|19820|ring finger protein, LIM domain interacting	NM_011276|Rlim|19820|ring finger protein, LIM domain interacting
mm9_v1_chr14_+_70930768_70930822	0.0141189	NKX3-2.p2	BC055315|Lgi3|213469|leucine-rich repeat LGI family, member 3	BC061460|Lgi3|213469|leucine-rich repeat LGI family, member 3
mm9_v1_chrX_-_20527674_20527737	0.0141097	NKX3-2.p2	BC054474|Elk1|13712|ELK1, member of ETS oncogene family	AK132354|Elk1|13712|ELK1, member of ETS oncogene family	NM_007922|Elk1|13712|ELK1, member of ETS oncogene family	AK082260|Elk1|13712|ELK1, member of ETS oncogene family
mm9_v1_chr15_-_75509153_75509239	0.0140611	NKX3-2.p2	BC138582|Top1mt|72960|DNA topoisomerase 1, mitochondrial	BC138583|Top1mt|72960|DNA topoisomerase 1, mitochondrial	BC145336|Top1mt|72960|DNA topoisomerase 1, mitochondrial	AF362952|Top1mt|72960|DNA topoisomerase 1, mitochondrial	NM_028404|Top1mt|72960|DNA topoisomerase 1, mitochondrial	AK147119|Top1mt|72960|DNA topoisomerase 1, mitochondrial
mm9_v1_chr16_-_46010510_46010548	0.0140251	NKX3-2.p2	NM_001134480|Plcxd2|433022|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm9_v1_chr18_+_36894692_36894835	0.0140204	NKX3-2.p2	AK046207|Tmco6|71983|transmembrane and coiled-coil domains 6	BC005637|Tmco6|71983|transmembrane and coiled-coil domains 6	NM_028036|Tmco6|71983|transmembrane and coiled-coil domains 6	AK164554|Tmco6|71983|transmembrane and coiled-coil domains 6	AK010487|Tmco6|71983|transmembrane and coiled-coil domains 6
mm9_v1_chr8_-_42219037_42219129	0.0139482	NKX3-2.p2	AK040710|Mtus1|102103|mitochondrial tumor suppressor 1	AK143781|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005863|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr2_+_118752232_118752411	0.0139466	NKX3-2.p2	NM_028117|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154555|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK155115|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC043700|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154636|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK159357|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK011230|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC085479|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK171614|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC026886|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
mm9_v1_chr12_-_106103171_106103182	0.0139431	NKX3-2.p2	BC096470|Clmn|94040|calmin
mm9_v1_chrX_-_70163672_70163735	0.0139372	NKX3-2.p2	AK010541|Cetn2|26370|centrin 2	AK004081|Cetn2|26370|centrin 2	NM_019405|Cetn2|26370|centrin 2	AK140156|Cetn2|26370|centrin 2
mm9_v1_chr1_+_136391318_136391329	0.0137749	NKX3-2.p2	AK156126|Rabif|98710|RAB interacting factor
mm9_v1_chr14_+_69789858_69790075	0.0137504	NKX3-2.p2	AF045150|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC132558|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC139035|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AK006401|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC100425|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AF030113|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AK007304|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	NM_010920|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)
mm9_v1_chr12_-_82695968_82696003	0.0136424	NKX3-2.p2	AK005232|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK089101|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr7_-_20334872_20334921	0.0135442	NKX3-2.p2	BC059941|Pvrl2|19294|poliovirus receptor-related 2	NM_001159724|Pvrl2|19294|poliovirus receptor-related 2	NM_008990|Pvrl2|19294|poliovirus receptor-related 2
mm9_v1_chr12_+_111685516_111685575	0.0134885	NKX3-2.p2	AK129042|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK161855|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr7_-_129210524_129210583	0.0134212	NKX3-2.p2	AK129469|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK014324|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK076043|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK169225|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK167506|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	BC025907|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	NM_026140|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)
mm9_v1_chr1_-_45560001_45560126	0.013417	NKX3-2.p2	AK147328|Col5a2|12832|collagen, type V, alpha 2	NM_007737|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr4_+_107040634_107040642	0.0133834	NKX3-2.p2	BC021337|Tmem48|72787|transmembrane protein 48
mm9_v1_chr18_-_10029925_10030160	0.0133342	NKX3-2.p2	AB034633|Usp14|59025|ubiquitin specific peptidase 14	BC050197|Usp14|59025|ubiquitin specific peptidase 14	AK045909|Usp14|59025|ubiquitin specific peptidase 14	BC005571|Usp14|59025|ubiquitin specific peptidase 14	AK029977|Usp14|59025|ubiquitin specific peptidase 14	AK160215|Usp14|59025|ubiquitin specific peptidase 14	AK011322|Usp14|59025|ubiquitin specific peptidase 14	AK172477|Usp14|59025|ubiquitin specific peptidase 14	AK170933|Usp14|59025|ubiquitin specific peptidase 14	NM_001038589|Usp14|59025|ubiquitin specific peptidase 14	NM_021522|Usp14|59025|ubiquitin specific peptidase 14
mm9_v1_chr9_+_57758783_57758851	0.0132616	NKX3-2.p2	AK154496|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)	AK009025|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)	NM_001122873|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)	NM_027086|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)
mm9_v1_chr8_-_28239077_28239111	0.0132419	NKX3-2.p2	BC098232|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	BC021918|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK151198|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK012459|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK012680|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK028228|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK083122|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	NM_025686|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK017767|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like
mm9_v1_chr17_+_71965554_71965636	0.0131165	NKX3-2.p2	NM_175639|Wdr43|72515|WD repeat domain 43	AK012043|Wdr43|72515|WD repeat domain 43	AK152321|Wdr43|72515|WD repeat domain 43	AK032907|Wdr43|72515|WD repeat domain 43	AK080660|Wdr43|72515|WD repeat domain 43	AK129031|Wdr43|72515|WD repeat domain 43
mm9_v1_chr7_-_147340532_147340650	0.0130877	NKX3-2.p2	BC056484|Sprn|212518|shadow of prion protein	NM_183147|Sprn|212518|shadow of prion protein	AK049995|Sprn|212518|shadow of prion protein
mm9_v1_chrX_+_20276894_20276951	0.0130356	NKX3-2.p2	AK191787|Cdk16|18555|cyclin-dependent kinase 16	AK206138|Cdk16|18555|cyclin-dependent kinase 16	AK208421|Cdk16|18555|cyclin-dependent kinase 16	AK215824|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr4_-_116480186_116480196	0.0130029	NKX3-2.p2	AK046576|Toe1|68276|target of EGR1, member 1 (nuclear)
mm9_v1_chr13_-_55672471_55672500	0.0129983	NKX3-2.p2	AK155237|Fam193b|212483|family with sequence similarity 193, member B	NM_145382|Fam193b|212483|family with sequence similarity 193, member B
mm9_v1_chr11_-_120794140_120794186	0.0129976	NKX3-2.p2	AK220306|Ccdc57|71276|coiled-coil domain containing 57	BC056480|Ccdc57|71276|coiled-coil domain containing 57	NM_027745|Ccdc57|71276|coiled-coil domain containing 57
mm9_v1_chr7_-_106289639_106289648	0.0129756	NKX3-2.p2	AK165015|Uvrag|78610|UV radiation resistance associated gene	AK078085|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr11_-_78311204_78311255	0.0128521	NKX3-2.p2	BC058534|Sarm1|237868|sterile alpha and HEAT/Armadillo motif containing 1	BC080850|Sarm1|237868|sterile alpha and HEAT/Armadillo motif containing 1	NM_001168521|Sarm1|237868|sterile alpha and HEAT/Armadillo motif containing 1	NM_172795|Sarm1|237868|sterile alpha and HEAT/Armadillo motif containing 1
mm9_v1_chr13_-_35055651_35055680	0.0128481	NKX3-2.p2	BC014724|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene	AK007578|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene	AK131590|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene	NM_026947|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene
mm9_v1_chr3_-_109946095_109946180	0.0128335	NKX3-2.p2	AB038667|Ntng1|80883|netrin G1	AK173075|Ntng1|80883|netrin G1
mm9_v1_chr4_+_137150067_137150162	0.0126623	NKX3-2.p2	AK166158|Usp48|170707|ubiquitin specific peptidase 48	NM_130879|Usp48|170707|ubiquitin specific peptidase 48	AK220190|Usp48|170707|ubiquitin specific peptidase 48	BC021769|Usp48|170707|ubiquitin specific peptidase 48	AK052297|Usp48|170707|ubiquitin specific peptidase 48
mm9_v1_chr1_+_74331503_74331655	0.0126254	NKX3-2.p2	AF318058|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116236|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116237|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_001039509|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_025580|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC008274|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC058945|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK012976|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK173125|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK009545|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY039041|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY299972|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK166548|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia
mm9_v1_chr19_+_44637331_44637363	0.0125752	NKX3-2.p2	AK154774|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	BC130013|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	NM_176958|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	AK084960|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	AK043636|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	AK141867|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor
mm9_v1_chr15_+_76527134_76527193	0.0125539	NKX3-2.p2	AK004932|Gpt|76282|glutamic pyruvic transaminase, soluble	AK008086|Gpt|76282|glutamic pyruvic transaminase, soluble	AK009457|Gpt|76282|glutamic pyruvic transaminase, soluble	BC026846|Gpt|76282|glutamic pyruvic transaminase, soluble	BC022625|Gpt|76282|glutamic pyruvic transaminase, soluble	NM_182805|Gpt|76282|glutamic pyruvic transaminase, soluble
mm9_v1_chr7_-_151768212_151768385	0.0125501	NKX3-2.p2	U43184|Fadd|14082|Fas (TNFRSF6)-associated via death domain	U50406|Fadd|14082|Fas (TNFRSF6)-associated via death domain	AK198513|Fadd|14082|Fas (TNFRSF6)-associated via death domain	BC021400|Fadd|14082|Fas (TNFRSF6)-associated via death domain	BC004584|Fadd|14082|Fas (TNFRSF6)-associated via death domain	AK031396|Fadd|14082|Fas (TNFRSF6)-associated via death domain	AK084808|Fadd|14082|Fas (TNFRSF6)-associated via death domain	NM_010175|Fadd|14082|Fas (TNFRSF6)-associated via death domain	AK007648|Fadd|14082|Fas (TNFRSF6)-associated via death domain	AK169798|Fadd|14082|Fas (TNFRSF6)-associated via death domain	AK170927|Fadd|14082|Fas (TNFRSF6)-associated via death domain
mm9_v1_chr2_-_48804794_48804803	0.0125215	NKX3-2.p2	AK145454|Orc4|26428|origin recognition complex, subunit 4
mm9_v1_chr4_+_114761644_114761734	0.0124793	NKX3-2.p2	BC013542|Pdzk1ip1|67182|PDZK1 interacting protein 1	AB009296|Pdzk1ip1|67182|PDZK1 interacting protein 1
mm9_v1_chr13_-_32943036_32943057	0.0124753	NKX3-2.p2	AF426024|Serpinb1a|66222|serine (or cysteine) peptidase inhibitor, clade B, member 1a	AK003930|Serpinb1a|66222|serine (or cysteine) peptidase inhibitor, clade B, member 1a	AK008914|Serpinb1a|66222|serine (or cysteine) peptidase inhibitor, clade B, member 1a	AK076129|Serpinb1a|66222|serine (or cysteine) peptidase inhibitor, clade B, member 1a	AK160167|Serpinb1a|66222|serine (or cysteine) peptidase inhibitor, clade B, member 1a	AK004500|Serpinb1a|66222|serine (or cysteine) peptidase inhibitor, clade B, member 1a	NM_025429|Serpinb1a|66222|serine (or cysteine) peptidase inhibitor, clade B, member 1a
mm9_v1_chr1_-_170085798_170085873	0.0124661	NKX3-2.p2	AK080184|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK032161|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK043495|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK085198|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr19_-_10752469_10752560	0.0124526	NKX3-2.p2	AF240776|Pga5|58803|pepsinogen 5, group I	AK004109|Pga5|58803|pepsinogen 5, group I	AK168924|Pga5|58803|pepsinogen 5, group I	BC119523|Pga5|58803|pepsinogen 5, group I	AK053965|Pga5|58803|pepsinogen 5, group I	NM_021453|Pga5|58803|pepsinogen 5, group I
mm9_v1_chr3_+_95985065_95985205	0.0124502	NKX3-2.p2	AK080525|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK144166|Sv2a|64051|synaptic vesicle glycoprotein 2 a	BC046587|Sv2a|64051|synaptic vesicle glycoprotein 2 a	NM_022030|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK080502|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK028318|Sv2a|64051|synaptic vesicle glycoprotein 2 a
mm9_v1_chr12_+_35731853_35731876	0.0124146	NKX3-2.p2	AK154425|Snx13|217463|sorting nexin 13	NM_001014973|Snx13|217463|sorting nexin 13	AK166180|Snx13|217463|sorting nexin 13	BC067201|Snx13|217463|sorting nexin 13
mm9_v1_chr19_-_4615460_4615508	0.0123921	NKX3-2.p2	AK081560|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr17_-_15635203_15635292	0.0123506	NKX3-2.p2	AK077520|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	AK132161|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	NM_011185|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	BC018351|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	X80686|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	U60824|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	AK167647|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	AK028265|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1
mm9_v1_chr17_+_27070071_27070094	0.0123219	NKX3-2.p2	AK139088|Phf1|21652|PHD finger protein 1	NM_009343|Phf1|21652|PHD finger protein 1	AK155268|Phf1|21652|PHD finger protein 1	AK144793|Phf1|21652|PHD finger protein 1	AK076365|Phf1|21652|PHD finger protein 1
mm9_v1_chr12_+_33063902_33064058	0.0122761	NKX3-2.p2	AK171109|2010109K11Rik|72123|RIKEN cDNA 2010109K11 gene
mm9_v1_chr18_+_23573939_23573956	0.0122339	NKX3-2.p2	BC040364|Dtna|13527|dystrobrevin alpha
mm9_v1_chr7_+_35697397_35697452	0.012134	NKX3-2.p2	AK145843|Pepd|18624|peptidase D	BC131945|Pepd|18624|peptidase D	BC131973|Pepd|18624|peptidase D	NM_008820|Pepd|18624|peptidase D	U51014|Pepd|18624|peptidase D	AK168384|Pepd|18624|peptidase D	AK010581|Pepd|18624|peptidase D	D82983|Pepd|18624|peptidase D	BC086644|Pepd|18624|peptidase D
mm9_v1_chr18_-_70689894_70689974	0.0120947	NKX3-2.p2	AK145244|Poli|26447|polymerase (DNA directed), iota	AK154537|Poli|26447|polymerase (DNA directed), iota	BC057575|Poli|26447|polymerase (DNA directed), iota	AK163784|Poli|26447|polymerase (DNA directed), iota	AF151691|Poli|26447|polymerase (DNA directed), iota	NM_011972|Poli|26447|polymerase (DNA directed), iota
mm9_v1_chr3_-_94590356_94590436	0.0120541	NKX3-2.p2	BC052941|Cgn|70737|cingulin	AK018143|Cgn|70737|cingulin	BC108378|Cgn|70737|cingulin	BC042459|Cgn|70737|cingulin	BC064474|Cgn|70737|cingulin	BC087546|Cgn|70737|cingulin	AK173148|Cgn|70737|cingulin	NM_001037711|Cgn|70737|cingulin
mm9_v1_chr12_-_113912266_113912513	0.0120207	NKX3-2.p2	AK154936|Akt1|11651|thymoma viral proto-oncogene 1	AK040758|Akt1|11651|thymoma viral proto-oncogene 1	X65687|Akt1|11651|thymoma viral proto-oncogene 1	BC066018|Akt1|11651|thymoma viral proto-oncogene 1	NM_001165894|Akt1|11651|thymoma viral proto-oncogene 1	NM_009652|Akt1|11651|thymoma viral proto-oncogene 1
mm9_v1_chr11_+_103828032_103828117	0.0120199	NKX3-2.p2	AK042977|Arf2|11841|ADP-ribosylation factor 2	AK077591|Arf2|11841|ADP-ribosylation factor 2	AK167653|Arf2|11841|ADP-ribosylation factor 2	AK167601|Arf2|11841|ADP-ribosylation factor 2	AK167133|Arf2|11841|ADP-ribosylation factor 2	AK169094|Arf2|11841|ADP-ribosylation factor 2	AK169412|Arf2|11841|ADP-ribosylation factor 2	D87899|Arf2|11841|ADP-ribosylation factor 2	AK031259|Arf2|11841|ADP-ribosylation factor 2
mm9_v1_chr8_+_3587449_3587449	0.0120184	NKX3-2.p2	NM_001163749|2310057J16Rik|69697|RIKEN cDNA 2310057J16 gene	NM_027171|2310057J16Rik|69697|RIKEN cDNA 2310057J16 gene
mm9_v1_chr4_+_155484072_155484109	0.0119744	NKX3-2.p2	AK029276|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	BC004010|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_145557|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_177205|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	AK034620|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene
mm9_v1_chr12_-_57446800_57446880	0.0119456	NKX3-2.p2	AK077125|Mbip|217588|MAP3K12 binding inhibitory protein 1	AK154318|Mbip|217588|MAP3K12 binding inhibitory protein 1	AK171164|Mbip|217588|MAP3K12 binding inhibitory protein 1	BC002277|Mbip|217588|MAP3K12 binding inhibitory protein 1	NM_145442|Mbip|217588|MAP3K12 binding inhibitory protein 1
mm9_v1_chr15_+_74346624_74346672	0.0117997	NKX3-2.p2	AK147607|Bai1|107831|brain-specific angiogenesis inhibitor 1	NM_174991|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147456|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147459|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chrX_+_132758579_132758588	0.011791	NKX3-2.p2	NM_001127169|Tceal7|100040972|transcription elongation factor A (SII)-like 7	AK003800|Tceal7|100040972|transcription elongation factor A (SII)-like 7
mm9_v1_chr17_-_25933867_25933930	0.0117315	NKX3-2.p2	BC008695|Metrn|70083|meteorin, glial cell differentiation regulator	BC037181|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133462|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133463|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133464|Metrn|70083|meteorin, glial cell differentiation regulator	AK007688|Metrn|70083|meteorin, glial cell differentiation regulator
mm9_v1_chr2_-_34916915_34916960	0.0116987	NKX3-2.p2	M35525|Hc|15139|hemolytic complement	M35526|Hc|15139|hemolytic complement	AK080166|Hc|15139|hemolytic complement	NM_010406|Hc|15139|hemolytic complement
mm9_v1_chr2_+_75670230_75670233	0.0116459	NKX3-2.p2	AK031049|Agps|228061|alkylglycerone phosphate synthase	NM_172666|Agps|228061|alkylglycerone phosphate synthase
mm9_v1_chr11_-_73137838_73138062	0.0116123	NKX3-2.p2	AK035910|Aspa|11484|aspartoacylase	AF212998|Aspa|11484|aspartoacylase
mm9_v1_chr3_-_58934492_58934545	0.0115101	NKX3-2.p2	BC028995|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AK164982|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AK140301|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AF177211|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	BC058558|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	NM_001008497|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	NM_133200|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14
mm9_v1_chr9_-_118835375_118835530	0.0114843	NKX3-2.p2	
mm9_v1_chr2_+_167328880_167328942	0.0114536	NKX3-2.p2	AK148290|Rnf114|81018|ring finger protein 114	AK079751|Rnf114|81018|ring finger protein 114	AK088441|Rnf114|81018|ring finger protein 114	AK148392|Rnf114|81018|ring finger protein 114	AF502145|Rnf114|81018|ring finger protein 114	AF282919|Rnf114|81018|ring finger protein 114	AK150086|Rnf114|81018|ring finger protein 114	AK150263|Rnf114|81018|ring finger protein 114	AK152687|Rnf114|81018|ring finger protein 114
mm9_v1_chr2_-_30270820_30270884	0.0114358	NKX3-2.p2	AK187827|Crat|12908|carnitine acetyltransferase	AK218779|Crat|12908|carnitine acetyltransferase
mm9_v1_chr14_+_34736806_34736957	0.0114352	NKX3-2.p2	L42114|Gdf10|14560|growth differentiation factor 10	S82648|Gdf10|14560|growth differentiation factor 10
mm9_v1_chr7_+_129363009_129363009	0.0114238	NKX3-2.p2	BC119202|2010110P09Rik|70261|RIKEN cDNA 2010110P09 gene	BC119204|2010110P09Rik|70261|RIKEN cDNA 2010110P09 gene	NM_027363|2010110P09Rik|70261|RIKEN cDNA 2010110P09 gene
mm9_v1_chr9_-_71011053_71011095	0.011371	NKX3-2.p2	BC024105|Aqp9|64008|aquaporin 9	AK050042|Aqp9|64008|aquaporin 9	NM_022026|Aqp9|64008|aquaporin 9
mm9_v1_chr7_-_134028480_134028480	0.0113593	NKX3-2.p2	NM_001163774|Taok2|381921|TAO kinase 2	NM_001163775|Taok2|381921|TAO kinase 2
mm9_v1_chrM_+_11812_11845	0.0113109	NKX3-2.p2	
mm9_v1_chr2_+_173902521_173902654	0.0112852	NKX3-2.p2	AK078110|Stx16|228960|syntaxin 16	NM_001102423|Stx16|228960|syntaxin 16	NM_001102424|Stx16|228960|syntaxin 16	NM_001102425|Stx16|228960|syntaxin 16	NM_172675|Stx16|228960|syntaxin 16	BC094436|Stx16|228960|syntaxin 16	BC095989|Stx16|228960|syntaxin 16	BC138544|Stx16|228960|syntaxin 16
mm9_v1_chr12_-_11157178_11157178	0.011204	NKX3-2.p2	AK046054|Kcns3|238076|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	NM_173417|Kcns3|238076|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
mm9_v1_chr14_-_104242892_104242969	0.0111532	NKX3-2.p2	U32329|Ednrb|13618|endothelin receptor type B	AK085165|Ednrb|13618|endothelin receptor type B	AK076426|Ednrb|13618|endothelin receptor type B	AK085532|Ednrb|13618|endothelin receptor type B	NM_007904|Ednrb|13618|endothelin receptor type B
mm9_v1_chr8_-_89996474_89996540	0.0110727	NKX3-2.p2	AK158818|Cbln1|12404|cerebellin 1 precursor protein	NM_019626|Cbln1|12404|cerebellin 1 precursor protein	AK158885|Cbln1|12404|cerebellin 1 precursor protein
mm9_v1_chr9_-_7184445_7184523	0.0110691	NKX3-2.p2	AY452064|Dync2h1|110350|dynein cytoplasmic 2 heavy chain 1	AK013186|2610019N06Rik|66299|RIKEN cDNA 2610019N06 gene	AK011471|2610019N06Rik|66299|RIKEN cDNA 2610019N06 gene
mm9_v1_chr10_+_82329370_82329405	0.0109298	NKX3-2.p2	AK161275|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK161307|Eid3|66341|EP300 interacting inhibitor of differentiation 3	NM_025499|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK007194|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK006438|Eid3|66341|EP300 interacting inhibitor of differentiation 3	BC099545|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK132745|Eid3|66341|EP300 interacting inhibitor of differentiation 3
mm9_v1_chr17_-_66426165_66426256	0.0107672	NKX3-2.p2	BC023046|Ankrd12|106585|ankyrin repeat domain 12
mm9_v1_chr9_+_92144928_92145085	0.0107253	NKX3-2.p2	AK137603|Plscr1|22038|phospholipid scramblase 1	NM_011636|Plscr1|22038|phospholipid scramblase 1	AF159593|Plscr1|22038|phospholipid scramblase 1
mm9_v1_chr2_+_136357921_136358056	0.0107232	NKX3-2.p2	AK029804|Ankrd5|319196|ankyrin repeat domain 5	BC089504|Ankrd5|319196|ankyrin repeat domain 5	BC120825|Ankrd5|319196|ankyrin repeat domain 5	BC144833|Ankrd5|319196|ankyrin repeat domain 5	NM_175667|Ankrd5|319196|ankyrin repeat domain 5
mm9_v1_chr3_-_137794277_137794364	0.010703	NKX3-2.p2	L47970|Mttp|17777|microsomal triglyceride transfer protein	BC012686|Mttp|17777|microsomal triglyceride transfer protein	AK146553|Mttp|17777|microsomal triglyceride transfer protein	NM_008642|Mttp|17777|microsomal triglyceride transfer protein
mm9_v1_chr14_+_46703700_46703706	0.0106651	NKX3-2.p2	AK088453|Gm1821|218963|ubiquitin pseudogene
mm9_v1_chr13_+_55254169_55254235	0.0106609	NKX3-2.p2	AK084850|Fgfr4|14186|fibroblast growth factor receptor 4	NM_008011|Fgfr4|14186|fibroblast growth factor receptor 4	AK085723|Fgfr4|14186|fibroblast growth factor receptor 4	X59927|Fgfr4|14186|fibroblast growth factor receptor 4
mm9_v1_chrX_+_57252630_57252647	0.0106488	NKX3-2.p2	AK149372|F9|14071|coagulation factor IX	NM_007979|F9|14071|coagulation factor IX	BC125617|F9|14071|coagulation factor IX	BC132393|F9|14071|coagulation factor IX
mm9_v1_chr15_-_75920355_75920542	0.010627	NKX3-2.p2	BC011468|Nrbp2|223649|nuclear receptor binding protein 2	BC012437|Nrbp2|223649|nuclear receptor binding protein 2	NM_144847|Nrbp2|223649|nuclear receptor binding protein 2
mm9_v1_chr18_+_89141181_89141199	0.0105764	NKX3-2.p2	AF265232|Rttn|246102|rotatin	NM_175542|Rttn|246102|rotatin	AK083016|Rttn|246102|rotatin	AK141510|Rttn|246102|rotatin
mm9_v1_chr10_-_126558207_126558220	0.0103102	NKX3-2.p2	NM_001171026|Os9|216440|amplified in osteosarcoma	NM_177614|Os9|216440|amplified in osteosarcoma
mm9_v1_chr16_+_21423263_21423279	0.0103026	NKX3-2.p2	AK141678|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	AK149336|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	BC055323|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)
mm9_v1_chr15_-_64214297_64214312	0.0102306	NKX3-2.p2	AF075461|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1	AF075462|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1
mm9_v1_chr5_+_108796754_108796809	0.0101891	NKX3-2.p2	AK031816|Gm10419|100038441|predicted gene 10419
mm9_v1_chr11_-_70817905_70817971	0.0101729	NKX3-2.p2	BC027842|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	BC052172|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK035177|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_178367|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK087592|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33
mm9_v1_chr11_+_69579464_69579517	0.0101703	NKX3-2.p2	AK009517|Zbtb4|75580|zinc finger and BTB domain containing 4
mm9_v1_chr10_+_55834925_55834944	0.0101274	NKX3-2.p2	BC013191|Msl3l2|73390|male-specific lethal 3-like 2 (Drosophila)
mm9_v1_chr6_-_87446228_87446307	0.0100802	NKX3-2.p2	BC138751|Arhgap25|232201|Rho GTPase activating protein 25	BC138752|Arhgap25|232201|Rho GTPase activating protein 25	AK137526|Arhgap25|232201|Rho GTPase activating protein 25	AK048450|Arhgap25|232201|Rho GTPase activating protein 25	NM_175476|Arhgap25|232201|Rho GTPase activating protein 25	AK137444|Arhgap25|232201|Rho GTPase activating protein 25
mm9_v1_chr11_+_93905557_93905590	0.0100463	NKX3-2.p2	BC052058|Spag9|70834|sperm associated antigen 9	BC060100|Spag9|70834|sperm associated antigen 9	BC094670|Spag9|70834|sperm associated antigen 9
mm9_v1_chr17_+_35035898_35035925	0.0100176	NKX3-2.p2	AK154246|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	AB077210|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	NM_145830|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2
mm9_v1_chr2_-_10052196_10052339	0.00996953	NKX3-2.p2	AK133782|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	BC034341|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	X70392|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	NM_010582|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2
mm9_v1_chr6_-_97409251_97409295	0.0099658	NKX3-2.p2	AK129262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr14_-_31439299_31439408	0.00992122	NKX3-2.p2	BC051416|Prkcd|18753|protein kinase C, delta	M69042|Prkcd|18753|protein kinase C, delta	AK168768|Prkcd|18753|protein kinase C, delta	AK171476|Prkcd|18753|protein kinase C, delta	AK144231|Prkcd|18753|protein kinase C, delta
mm9_v1_chr8_+_86239094_86239097	0.00991473	NKX3-2.p2	NM_197982|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm9_v1_chr2_+_181572558_181572632	0.00991068	NKX3-2.p2	AK031335|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	BC040385|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	NM_153594|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AK146080|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AB182640|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AK088800|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
mm9_v1_chr16_+_16870904_16870931	0.00985855	NKX3-2.p2	AB045324|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr14_+_56291071_56291136	0.0098518	NKX3-2.p2	NM_177992|Gmpr2|105446|guanosine monophosphate reductase 2	AK031004|Gmpr2|105446|guanosine monophosphate reductase 2	AK163048|Gmpr2|105446|guanosine monophosphate reductase 2	AK075772|Gmpr2|105446|guanosine monophosphate reductase 2	BC024109|Gmpr2|105446|guanosine monophosphate reductase 2	BC003886|Gmpr2|105446|guanosine monophosphate reductase 2
mm9_v1_chr6_-_92484838_92484854	0.00979775	NKX3-2.p2	AK147576|Prickle2|243548|prickle homolog 2 (Drosophila)	AK147628|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134459|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr7_+_63305622_63305758	0.00979343	NKX3-2.p2	AF071173|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2	AF061529|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr19_+_7457020_7457026	0.00978852	NKX3-2.p2	AK018939|1700105P06Rik|654802|RIKEN cDNA 1700105P06 gene
mm9_v1_chr17_-_47748405_47748448	0.00974501	NKX3-2.p2	AK083033|Bysl|53414|bystin-like	AK051704|Bysl|53414|bystin-like	AK049195|Bysl|53414|bystin-like	AK143027|Bysl|53414|bystin-like	NM_016859|Bysl|53414|bystin-like
mm9_v1_chr13_+_42961598_42961632	0.00964532	NKX3-2.p2	AK139452|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr15_-_91022165_91022189	0.0096225	NKX3-2.p2	BC019187|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2
mm9_v1_chr8_+_26712705_26712790	0.00960452	NKX3-2.p2	AK170040|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	BC064447|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	NM_001001735|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	AK172238|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
mm9_v1_chr13_+_91062722_91062758	0.00958373	NKX3-2.p2	NM_024175|Rps23|66475|ribosomal protein S23	AK166994|Rps23|66475|ribosomal protein S23	AK010667|Rps23|66475|ribosomal protein S23
mm9_v1_chr13_-_23654226_23654256	0.00956759	NKX3-2.p2	BC127042|Hist1h3e|319151|histone cluster 1, H3e	NM_178205|Hist1h3e|319151|histone cluster 1, H3e
mm9_v1_chr6_+_113647492_113647666	0.00951189	NKX3-2.p2	AK156197|Tatdn2|381801|TatD DNase domain containing 2	NM_001033463|Tatdn2|381801|TatD DNase domain containing 2	BC141065|Tatdn2|381801|TatD DNase domain containing 2	BC145318|Tatdn2|381801|TatD DNase domain containing 2	AK220217|Tatdn2|381801|TatD DNase domain containing 2
mm9_v1_chr16_+_57121995_57122259	0.00949266	NKX3-2.p2	AK181660|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK192263|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK195397|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK196165|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK202736|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chr16_+_18498805_18498912	0.00947821	NKX3-2.p2	AK087954|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	NM_001081682|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK016952|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK171253|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AF301595|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like
mm9_v1_chr11_-_93746982_93747028	0.00946013	NKX3-2.p2	AK154637|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	AK032265|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr7_+_129210684_129210770	0.00945052	NKX3-2.p2	AK077395|Ubfd1|28018|ubiquitin family domain containing 1	NM_138589|Ubfd1|28018|ubiquitin family domain containing 1	BC011313|Ubfd1|28018|ubiquitin family domain containing 1	AK033428|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr18_+_34784277_34784277	0.00943781	NKX3-2.p2	NM_001166407|Kif20a|19348|kinesin family member 20A
mm9_v1_chr17_-_80689815_80689815	0.00941138	NKX3-2.p2	BC062952|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_001163759|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_198942|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr11_+_103635438_103635563	0.00936737	NKX3-2.p2	AK132516|Wnt3|22415|wingless-related MMTV integration site 3	NM_009521|Wnt3|22415|wingless-related MMTV integration site 3	M32502|Wnt3|22415|wingless-related MMTV integration site 3	BC152305|Wnt3|22415|wingless-related MMTV integration site 3	BC152537|Wnt3|22415|wingless-related MMTV integration site 3	BC152304|Wnt3|22415|wingless-related MMTV integration site 3	AK141154|Wnt3|22415|wingless-related MMTV integration site 3	BC141271|Wnt3|22415|wingless-related MMTV integration site 3	BC141274|Wnt3|22415|wingless-related MMTV integration site 3
mm9_v1_chr9_-_55994906_55994921	0.00934015	NKX3-2.p2	AK207599|Tspan3|56434|tetraspanin 3	AK178223|Tspan3|56434|tetraspanin 3	AK180027|Tspan3|56434|tetraspanin 3	AK182665|Tspan3|56434|tetraspanin 3	AK188385|Tspan3|56434|tetraspanin 3	AK220124|Tspan3|56434|tetraspanin 3
mm9_v1_chr11_-_73138102_73138139	0.00932461	NKX3-2.p2	BC024934|Aspa|11484|aspartoacylase	AK002859|Aspa|11484|aspartoacylase	AK008354|Aspa|11484|aspartoacylase	NM_023113|Aspa|11484|aspartoacylase
mm9_v1_chr6_-_35083720_35083747	0.00932078	NKX3-2.p2	AK165997|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	AK075887|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164411|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164412|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164413|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_001164414|Cnot4|53621|CCR4-NOT transcription complex, subunit 4	NM_016877|Cnot4|53621|CCR4-NOT transcription complex, subunit 4
mm9_v1_chr11_+_97888023_97888023	0.00931808	NKX3-2.p2	NM_001159483|Rpl19|19921|ribosomal protein L19
mm9_v1_chr1_+_136391210_136391249	0.00930385	NKX3-2.p2	AK133528|Rabif|98710|RAB interacting factor	AK165748|Rabif|98710|RAB interacting factor	AK158129|Rabif|98710|RAB interacting factor	AK165795|Rabif|98710|RAB interacting factor	BC011166|Rabif|98710|RAB interacting factor	NM_145510|Rabif|98710|RAB interacting factor	AK155054|Rabif|98710|RAB interacting factor	AK087547|Rabif|98710|RAB interacting factor	BC024808|Rabif|98710|RAB interacting factor
mm9_v1_chr4_-_3501974_3502001	0.00928728	NKX3-2.p2	AK165916|Tmem68|72098|transmembrane protein 68	AK166237|Tmem68|72098|transmembrane protein 68
mm9_v1_chr17_-_85189899_85189902	0.00926102	NKX3-2.p2	AK039751|Lrpprc|72416|leucine-rich PPR-motif containing
mm9_v1_chr1_+_5073161_5073324	0.00923136	NKX3-2.p2	AK151659|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK034165|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK135137|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK152147|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK081492|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	BC009154|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK078767|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	NM_133826|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H
mm9_v1_chr18_-_66129715_66129836	0.00922079	NKX3-2.p2	AY264291|Cplx4|225644|complexin 4	BC016082|Cplx4|225644|complexin 4	NM_145493|Cplx4|225644|complexin 4	AK044262|Cplx4|225644|complexin 4
mm9_v1_chr4_-_129255652_129255823	0.00919307	NKX3-2.p2	AK134621|Fam167b|230766|family with sequence similarity 167, member B	BC030183|Fam167b|230766|family with sequence similarity 167, member B	AK143928|Fam167b|230766|family with sequence similarity 167, member B	NM_182783|Fam167b|230766|family with sequence similarity 167, member B
mm9_v1_chr15_-_89185832_89185990	0.00919215	NKX3-2.p2	AK184485|Lmf2|105847|lipase maturation factor 2	AK185616|Lmf2|105847|lipase maturation factor 2	AK084606|Lmf2|105847|lipase maturation factor 2	BC026448|Lmf2|105847|lipase maturation factor 2	BC079532|Lmf2|105847|lipase maturation factor 2
mm9_v1_chr14_+_70499874_70499971	0.00904594	NKX3-2.p2	AK170915|Bin3|57784|bridging integrator 3	AF271733|Bin3|57784|bridging integrator 3	AK005992|Bin3|57784|bridging integrator 3	AK040685|Bin3|57784|bridging integrator 3	NM_021328|Bin3|57784|bridging integrator 3	BC026543|Bin3|57784|bridging integrator 3	AK210433|Bin3|57784|bridging integrator 3	AF244361|Bin3|57784|bridging integrator 3
mm9_v1_chr2_-_69627542_69627605	0.00903558	NKX3-2.p2	BC125570|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	BC132491|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	BC145015|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	NM_001077684|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	AK015894|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	AK016309|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene	BC099565|4930578N16Rik|75051|RIKEN cDNA 4930578N16 gene
mm9_v1_chr7_-_127038916_127038971	0.00902208	NKX3-2.p2	AK029043|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	NM_173408|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm9_v1_chr12_-_46175310_46175359	0.00896718	NKX3-2.p2	BC024598|Stxbp6|217517|syntaxin binding protein 6 (amisyn)
mm9_v1_chr14_+_75576599_75576717	0.00896475	NKX3-2.p2	AK088202|Lcp1|18826|lymphocyte cytosolic protein 1	U82610|Lcp1|18826|lymphocyte cytosolic protein 1	AK169728|Lcp1|18826|lymphocyte cytosolic protein 1	AK171751|Lcp1|18826|lymphocyte cytosolic protein 1	AK030996|Lcp1|18826|lymphocyte cytosolic protein 1	AK169972|Lcp1|18826|lymphocyte cytosolic protein 1	AK167261|Lcp1|18826|lymphocyte cytosolic protein 1	AK153061|Lcp1|18826|lymphocyte cytosolic protein 1	AK153082|Lcp1|18826|lymphocyte cytosolic protein 1	AK151542|Lcp1|18826|lymphocyte cytosolic protein 1	AK089922|Lcp1|18826|lymphocyte cytosolic protein 1	AK151720|Lcp1|18826|lymphocyte cytosolic protein 1	AK152668|Lcp1|18826|lymphocyte cytosolic protein 1	AK152891|Lcp1|18826|lymphocyte cytosolic protein 1	AK152902|Lcp1|18826|lymphocyte cytosolic protein 1	AK168062|Lcp1|18826|lymphocyte cytosolic protein 1	AK153206|Lcp1|18826|lymphocyte cytosolic protein 1	AK169833|Lcp1|18826|lymphocyte cytosolic protein 1	AK030806|Lcp1|18826|lymphocyte cytosolic protein 1	AK151155|Lcp1|18826|lymphocyte cytosolic protein 1
mm9_v1_chr12_+_104626888_104626975	0.00893055	NKX3-2.p2	NM_026580|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK076336|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	NM_001177841|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	BC049551|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK016449|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK160505|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK019830|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK006346|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK006469|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	AK006054|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2	BC052409|Otub2|68149|OTU domain, ubiquitin aldehyde binding 2
mm9_v1_chr1_+_90303576_90303673	0.00884367	NKX3-2.p2	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr2_+_74695081_74695176	0.00882846	NKX3-2.p2	
mm9_v1_chr4_-_118846460_118846468	0.00877361	NKX3-2.p2	AK032431|Zfp691|195522|zinc finger protein 691	AK171649|Zfp691|195522|zinc finger protein 691	NM_001145935|Zfp691|195522|zinc finger protein 691	NM_183140|Zfp691|195522|zinc finger protein 691
mm9_v1_chr17_-_85461840_85461859	0.00875861	NKX3-2.p2	AK019367|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr2_-_31007794_31007831	0.00872433	NKX3-2.p2	AK043516|D330023K18Rik|320973|RIKEN cDNA D330023K18 gene
mm9_v1_chr2_+_91762334_91762347	0.00870284	NKX3-2.p2	NM_007699|Chrm4|12672|cholinergic receptor, muscarinic 4
mm9_v1_chr7_-_134164627_134164726	0.00867399	NKX3-2.p2	NM_001102563|Prrt2|69017|proline-rich transmembrane protein 2
mm9_v1_chr16_+_23146631_23146693	0.00863792	NKX3-2.p2	AK041214|Adipoq|11450|adiponectin, C1Q and collagen domain containing	AX767957|Adipoq|11450|adiponectin, C1Q and collagen domain containing	U37222|Adipoq|11450|adiponectin, C1Q and collagen domain containing	AK003138|Adipoq|11450|adiponectin, C1Q and collagen domain containing	BC028770|Adipoq|11450|adiponectin, C1Q and collagen domain containing
mm9_v1_chr12_-_25323807_25323931	0.00862489	NKX3-2.p2	AK216072|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like
mm9_v1_chr4_+_124743933_124743973	0.00858805	NKX3-2.p2	AK010794|Snip1|76793|Smad nuclear interacting protein 1	AK040571|Snip1|76793|Smad nuclear interacting protein 1	AK049254|Snip1|76793|Smad nuclear interacting protein 1	AK049318|Snip1|76793|Smad nuclear interacting protein 1	AK143801|Snip1|76793|Smad nuclear interacting protein 1	NM_175246|Snip1|76793|Smad nuclear interacting protein 1	AK078163|Snip1|76793|Smad nuclear interacting protein 1	AK132768|Snip1|76793|Smad nuclear interacting protein 1	BC064067|Snip1|76793|Smad nuclear interacting protein 1
mm9_v1_chr1_-_82287478_82287539	0.0085822	NKX3-2.p2	AK142242|Irs1|16367|insulin receptor substrate 1	X69722|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr10_+_127764070_127764180	0.00856576	NKX3-2.p2	
mm9_v1_chr7_+_126761293_126761347	0.00852386	NKX3-2.p2	AK149586|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	AK149550|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	BC016414|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	AB059428|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	NM_054094|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1
mm9_v1_chr11_+_77499668_77499674	0.00846758	NKX3-2.p2	AK142954|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK152336|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK132603|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2
mm9_v1_chr11_+_75327028_75327076	0.00845395	NKX3-2.p2	BC080288|Scarf1|380713|scavenger receptor class F, member 1	NM_001004157|Scarf1|380713|scavenger receptor class F, member 1	AK220215|Scarf1|380713|scavenger receptor class F, member 1	AK133477|Scarf1|380713|scavenger receptor class F, member 1	BC057600|Scarf1|380713|scavenger receptor class F, member 1
mm9_v1_chr1_-_82287067_82287145	0.00844929	NKX3-2.p2	L24563|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr18_-_42739132_42739305	0.0084372	NKX3-2.p2	AY255533|Gpr151|240239|G protein-coupled receptor 151	AY351677|Gpr151|240239|G protein-coupled receptor 151	BC120520|Gpr151|240239|G protein-coupled receptor 151	BC120526|Gpr151|240239|G protein-coupled receptor 151	AJ564167|Gpr151|240239|G protein-coupled receptor 151	NM_181543|Gpr151|240239|G protein-coupled receptor 151
mm9_v1_chr4_+_44045506_44045645	0.00843037	NKX3-2.p2	
mm9_v1_chr11_+_100488379_100488445	0.00841243	NKX3-2.p2	
mm9_v1_chrX_-_49034524_49034544	0.00836396	NKX3-2.p2	AK031649|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr4_-_58219478_58219506	0.00835682	NKX3-2.p2	AK035333|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AK087058|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr17_+_47641999_47642189	0.00835627	NKX3-2.p2	NM_001081635|Ccnd3|12445|cyclin D3	NM_001081636|Ccnd3|12445|cyclin D3	AK161758|Ccnd3|12445|cyclin D3	AK083384|Ccnd3|12445|cyclin D3	AK020317|Ccnd3|12445|cyclin D3
mm9_v1_chr11_-_53113895_53113995	0.00835475	NKX3-2.p2	AK155305|Hspa4|15525|heat shock protein 4	AK053601|Hspa4|15525|heat shock protein 4	AK054010|Hspa4|15525|heat shock protein 4	AK133772|Hspa4|15525|heat shock protein 4	AK220167|Hspa4|15525|heat shock protein 4	AK143543|Hspa4|15525|heat shock protein 4	AK171940|Hspa4|15525|heat shock protein 4	AK166102|Hspa4|15525|heat shock protein 4	NM_008300|Hspa4|15525|heat shock protein 4
mm9_v1_chr6_+_124989830_124989833	0.00830262	NKX3-2.p2	
mm9_v1_chr1_-_173224861_173224966	0.00829546	NKX3-2.p2	AK011260|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1	AK003070|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1
mm9_v1_chr16_-_89488129_89488198	0.00820638	NKX3-2.p2	D86423|Krtap8-1|16703|keratin associated protein 8-1	AK133727|Krtap8-1|16703|keratin associated protein 8-1	NM_010675|Krtap8-1|16703|keratin associated protein 8-1
mm9_v1_chr16_+_45159173_45159221	0.00819282	NKX3-2.p2	AB079386|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr14_+_35487307_35487412	0.00813763	NKX3-2.p2	AB167349|Wapal|218914|wings apart-like homolog (Drosophila)	BC139434|Wapal|218914|wings apart-like homolog (Drosophila)	BC145625|Wapal|218914|wings apart-like homolog (Drosophila)	AK041191|Wapal|218914|wings apart-like homolog (Drosophila)
mm9_v1_chr3_+_65470149_65470220	0.0081354	NKX3-2.p2	NM_001166659|Lekr1|624866|leucine, glutamate and lysine rich 1	NM_001037923|Lekr1|624866|leucine, glutamate and lysine rich 1	AK137452|Lekr1|624866|leucine, glutamate and lysine rich 1	BC147278|Lekr1|624866|leucine, glutamate and lysine rich 1	BC147279|Lekr1|624866|leucine, glutamate and lysine rich 1
mm9_v1_chr17_-_23923018_23923069	0.00810586	NKX3-2.p2	AK019378|Flywch2|76917|FLYWCH family member 2	AK013108|Flywch2|76917|FLYWCH family member 2	NM_029798|Flywch2|76917|FLYWCH family member 2
mm9_v1_chr5_-_23536487_23536520	0.00809347	NKX3-2.p2	BC060692|Fam126a|84652|family with sequence similarity 126, member A	AK155209|Fam126a|84652|family with sequence similarity 126, member A	NM_053090|Fam126a|84652|family with sequence similarity 126, member A
mm9_v1_chr1_+_122499031_122499257	0.00806488	NKX3-2.p2	NM_010133|En1|13798|engrailed 1	AK140408|En1|13798|engrailed 1	L12703|En1|13798|engrailed 1
mm9_v1_chr17_+_46339730_46339822	0.00804195	NKX3-2.p2	BC092371|Xpo5|72322|exportin 5	BC055455|Xpo5|72322|exportin 5	AK010389|Xpo5|72322|exportin 5	AF343581|Xpo5|72322|exportin 5	NM_028198|Xpo5|72322|exportin 5	BC131660|Xpo5|72322|exportin 5	BC131661|Xpo5|72322|exportin 5
mm9_v1_chr9_+_56712829_56712839	0.00803261	NKX3-2.p2	AK052394|Cspg4|121021|chondroitin sulfate proteoglycan 4
mm9_v1_chr4_+_126431013_126431096	0.00786517	NKX3-2.p2	NM_001035526|AU040320|100317|expressed sequence AU040320	NM_133886|AU040320|100317|expressed sequence AU040320	BC028869|AU040320|100317|expressed sequence AU040320	AK163033|AU040320|100317|expressed sequence AU040320	AK170261|AU040320|100317|expressed sequence AU040320	AK043006|AU040320|100317|expressed sequence AU040320	AK007704|AU040320|100317|expressed sequence AU040320	AK031342|AU040320|100317|expressed sequence AU040320
mm9_v1_chr19_+_46380107_46380288	0.00783142	NKX3-2.p2	AF155373|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	NM_019408|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK145312|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100
mm9_v1_chrX_+_53708015_53708070	0.0078242	NKX3-2.p2	NM_172779|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK031945|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	BC051161|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK083942|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK160627|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm9_v1_chr1_-_75274890_75274917	0.00780033	NKX3-2.p2	FJ621497|Resp18|19711|regulated endocrine-specific protein 18	AK019440|Resp18|19711|regulated endocrine-specific protein 18	AK012477|Resp18|19711|regulated endocrine-specific protein 18	BC027535|Resp18|19711|regulated endocrine-specific protein 18
mm9_v1_chr9_+_46076689_46076697	0.00778262	NKX3-2.p2	AF327059|Apoa5|66113|apolipoprotein A-V	NM_080434|Apoa5|66113|apolipoprotein A-V
mm9_v1_chr17_+_17201047_17201078	0.00775282	NKX3-2.p2	L20450|Zfp97|22759|zinc finger protein 97	BC064743|Zfp960|449000|zinc finger protein 960	BC066177|Zfp960|449000|zinc finger protein 960	NM_001005358|Zfp960|449000|zinc finger protein 960	NM_001163919|Zfp960|449000|zinc finger protein 960	BC018101|Zfp960|449000|zinc finger protein 960	AK145357|Zfp960|449000|zinc finger protein 960
mm9_v1_chr8_-_85297983_85298058	0.00767171	NKX3-2.p2	BC030675|Zfp330|30932|zinc finger protein 330	BC008086|Zfp330|30932|zinc finger protein 330	NM_145600|Zfp330|30932|zinc finger protein 330	AK050534|Zfp330|30932|zinc finger protein 330	AK086617|Zfp330|30932|zinc finger protein 330	BC083081|Zfp330|30932|zinc finger protein 330
mm9_v1_chr2_-_164630371_164630416	0.00766288	NKX3-2.p2	AF441166|Acot8|170789|acyl-CoA thioesterase 8	NM_133240|Acot8|170789|acyl-CoA thioesterase 8
mm9_v1_chr9_+_26807258_26807270	0.00764424	NKX3-2.p2	NM_144543|Thyn1|77862|thymocyte nuclear protein 1
mm9_v1_chr1_-_175671849_175671956	0.00762939	NKX3-2.p2	BC150711|AI607873|226691|expressed sequence AI607873	AK054438|AI607873|226691|expressed sequence AI607873
mm9_v1_chr12_-_82434150_82434166	0.00755782	NKX3-2.p2	AK139260|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	AF453257|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	AK044636|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_001167920|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_080440|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3
mm9_v1_chr3_-_88306724_88306855	0.00752304	NKX3-2.p2	AK180919|Lmna|16905|lamin A
mm9_v1_chr15_+_99125768_99125839	0.00751516	NKX3-2.p2	AF135440|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)	NM_018786|Prpf40b|54614|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm9_v1_chr11_-_60034046_60034130	0.0074605	NKX3-2.p2	AK154424|Srebf1|20787|sterol regulatory element binding transcription factor 1	BC056922|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK150052|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK052628|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK169607|Srebf1|20787|sterol regulatory element binding transcription factor 1	NM_011480|Srebf1|20787|sterol regulatory element binding transcription factor 1
mm9_v1_chr1_+_75233130_75233146	0.00744313	NKX3-2.p2	AB028858|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr4_+_41702080_41702128	0.00741892	NKX3-2.p2	NM_016658|Galt|14430|galactose-1-phosphate uridyl transferase
mm9_v1_chr15_+_102162136_102162200	0.00734509	NKX3-2.p2	NM_021713|Myg1|60315|melanocyte proliferating gene 1	AF289484|Myg1|60315|melanocyte proliferating gene 1	BC028501|Myg1|60315|melanocyte proliferating gene 1	AK017955|Myg1|60315|melanocyte proliferating gene 1	AK002656|Myg1|60315|melanocyte proliferating gene 1	AK004104|Myg1|60315|melanocyte proliferating gene 1	BC023124|Myg1|60315|melanocyte proliferating gene 1	AK013232|Myg1|60315|melanocyte proliferating gene 1
mm9_v1_chr8_+_96561162_96561175	0.00733956	NKX3-2.p2	AK166343|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr5_-_124777828_124777881	0.00733483	NKX3-2.p2	AK081178|Mphosph9|269702|M-phase phosphoprotein 9	AK132598|Mphosph9|269702|M-phase phosphoprotein 9	AK084586|Mphosph9|269702|M-phase phosphoprotein 9
mm9_v1_chr1_-_164867355_164867355	0.00723704	NKX3-2.p2	NM_001178038|Fmo6|226565|flavin containing monooxygenase 6
mm9_v1_chr11_-_84684177_84684284	0.00722818	NKX3-2.p2	AB064543|Ggnbp2|217039|gametogenetin binding protein 2	AY633741|Ggnbp2|217039|gametogenetin binding protein 2	NM_153144|Ggnbp2|217039|gametogenetin binding protein 2	AK162027|Ggnbp2|217039|gametogenetin binding protein 2
mm9_v1_chr11_+_105043195_105043203	0.00711249	NKX3-2.p2	AK014829|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)
mm9_v1_chr6_+_134961654_134961711	0.00706395	NKX3-2.p2	
mm9_v1_chr7_-_132635008_132635055	0.00703799	NKX3-2.p2	BC031848|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	BC049558|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	NM_026330|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr13_+_3537514_3537611	0.00702249	NKX3-2.p2	L36314|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr14_-_104243379_104243389	0.00692382	NKX3-2.p2	AK083415|Ednrb|13618|endothelin receptor type B	NM_001136061|Ednrb|13618|endothelin receptor type B
mm9_v1_chr7_+_31093768_31093831	0.006876	NKX3-2.p2	NM_198027|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK082058|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	BC029805|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK170861|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)
mm9_v1_chr9_+_108844100_108844145	0.00685843	NKX3-2.p2	
mm9_v1_chr19_-_5799376_5799434	0.00684795	NKX3-2.p2	AK020483|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr1_-_58502223_58502338	0.00684504	NKX3-2.p2	BC061645|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	AF315803|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	BC060993|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	AK010207|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	NM_027351|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	NM_027374|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3
mm9_v1_chr19_+_8815893_8816001	0.00682512	NKX3-2.p2	NM_001167799|Stx5a|56389|syntaxin 5A	AK002722|Stx5a|56389|syntaxin 5A	BC004849|Stx5a|56389|syntaxin 5A
mm9_v1_chr5_+_150821249_150821339	0.00682316	NKX3-2.p2	AF346501|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	NM_080468|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC120741|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144802|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144803|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	AK034592|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2
mm9_v1_chr7_+_48154647_48154658	0.00673143	NKX3-2.p2	AB030198|Vstm2b|58188|V-set and transmembrane domain containing 2B	NM_021387|Vstm2b|58188|V-set and transmembrane domain containing 2B	AK013845|Vstm2b|58188|V-set and transmembrane domain containing 2B
mm9_v1_chr2_+_167514489_167514504	0.00668105	NKX3-2.p2	M61007|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chr1_-_95374913_95374964	0.00667566	NKX3-2.p2	
mm9_v1_chr4_+_53644336_53644426	0.00667163	NKX3-2.p2	NM_001195284|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like	NM_176966|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like	AK140020|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like	AK038893|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like	BC130265|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like
mm9_v1_chr7_-_63274920_63274958	0.00663674	NKX3-2.p2	AK166325|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)	AY098645|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)	BC055828|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)	NM_153578|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)	AK046619|Nipa1|233280|non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)
mm9_v1_chr15_+_44259636_44259698	0.00657344	NKX3-2.p2	AK007877|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AF173297|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	BC048361|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	NM_175009|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK032957|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK162511|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK160628|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK016562|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK087816|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)
mm9_v1_chr14_-_21365388_21365411	0.00656195	NKX3-2.p2	AK010955|2510010E17Rik|76590|RIKEN cDNA 2510010E17 gene
mm9_v1_chr8_+_74999216_74999345	0.00654138	NKX3-2.p2	
mm9_v1_chr5_-_118605391_118605453	0.00653794	NKX3-2.p2	AK034447|Fbxw8|231672|F-box and WD-40 domain protein 8	AK047756|Fbxw8|231672|F-box and WD-40 domain protein 8	BC009095|Fbxw8|231672|F-box and WD-40 domain protein 8	AK047695|Fbxw8|231672|F-box and WD-40 domain protein 8
mm9_v1_chr9_+_121628357_121628391	0.00653554	NKX3-2.p2	AK088056|Nktr|18087|natural killer tumor recognition sequence	AK144214|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr6_+_99642672_99642672	0.00653397	NKX3-2.p2	NM_008158|Gpr27|14761|G protein-coupled receptor 27
mm9_v1_chr17_+_44914271_44914344	0.00651567	NKX3-2.p2	AK050321|Supt3h|109115|suppressor of Ty 3 homolog (S. cerevisiae)	AK087935|Supt3h|109115|suppressor of Ty 3 homolog (S. cerevisiae)	AK089837|Supt3h|109115|suppressor of Ty 3 homolog (S. cerevisiae)	BC096051|Supt3h|109115|suppressor of Ty 3 homolog (S. cerevisiae)
mm9_v1_chr4_-_132833514_132833604	0.00650647	NKX3-2.p2	
mm9_v1_chr9_+_121628258_121628322	0.00648974	NKX3-2.p2	AK163916|Nktr|18087|natural killer tumor recognition sequence	L04289|Nktr|18087|natural killer tumor recognition sequence	NM_010918|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr14_-_56364421_56364522	0.00647843	NKX3-2.p2	BC003930|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	BC023825|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK159964|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK146317|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK168147|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK168115|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	NM_026819|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1
mm9_v1_chr4_-_141430550_141430692	0.00647483	NKX3-2.p2	AK195742|Efhd2|27984|EF hand domain containing 2
mm9_v1_chr7_-_112936063_112936159	0.00643265	NKX3-2.p2	NM_001162943|Dchs1|233651|dachsous 1 (Drosophila)	AK048080|Dchs1|233651|dachsous 1 (Drosophila)
mm9_v1_chr8_+_75285778_75285801	0.00641684	NKX3-2.p2	AK036427|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	AK156729|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	NM_007975|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	BC119461|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	AK153720|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	AF080215|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3
mm9_v1_chr10_-_70622370_70622639	0.00641317	NKX3-2.p2	AF319464|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	BC111523|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	NM_031397|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	AK076154|Bicc1|83675|bicaudal C homolog 1 (Drosophila)
mm9_v1_chr1_+_72354084_72354123	0.00640425	NKX3-2.p2	X66323|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AF166486|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK010416|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK167312|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK168913|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK169838|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	BC029218|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5
mm9_v1_chr2_-_156817751_156817861	0.00633992	NKX3-2.p2	AK002272|Ndrg3|29812|N-myc downstream regulated gene 3	AB033922|Ndrg3|29812|N-myc downstream regulated gene 3	BC018504|Ndrg3|29812|N-myc downstream regulated gene 3	AK036277|Ndrg3|29812|N-myc downstream regulated gene 3	AK037487|Ndrg3|29812|N-myc downstream regulated gene 3	AK029378|Ndrg3|29812|N-myc downstream regulated gene 3	AK004689|Ndrg3|29812|N-myc downstream regulated gene 3	AK154927|Ndrg3|29812|N-myc downstream regulated gene 3	NM_013865|Ndrg3|29812|N-myc downstream regulated gene 3	NM_180956|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr1_-_36756687_36756877	0.00631989	NKX3-2.p2	AK010077|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
mm9_v1_chr2_+_163842411_163842512	0.00627613	NKX3-2.p2	AK199528|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr10_+_116018336_116018351	0.00625042	NKX3-2.p2	AK077360|5330438D12Rik|327824|RIKEN cDNA 5330438D12 gene
mm9_v1_chr3_-_88262982_88263022	0.00615525	NKX3-2.p2	NM_001163490|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr14_-_47896531_47896541	0.00613456	NKX3-2.p2	NM_172598|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1
mm9_v1_chr6_+_49773596_49773680	0.00608384	NKX3-2.p2	AF273768|Npy|109648|neuropeptide Y	AF286198|Npy|109648|neuropeptide Y	AF286199|Npy|109648|neuropeptide Y
mm9_v1_chr8_-_28524173_28524415	0.00595556	NKX3-2.p2	AY574265|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AJ245706|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AK149262|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	BC031985|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	NM_021369|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6
mm9_v1_chr12_+_32339717_32339751	0.00591915	NKX3-2.p2	AK030656|Cog5|238123|component of oligomeric golgi complex 5	NM_001163126|Cog5|238123|component of oligomeric golgi complex 5
mm9_v1_chr12_-_58646914_58647013	0.00587412	NKX3-2.p2	X74936|Foxa1|15375|forkhead box A1	U44752|Foxa1|15375|forkhead box A1
mm9_v1_chr4_+_102986392_102986487	0.00579845	NKX3-2.p2	AK076209|Oma1|67013|OMA1 homolog, zinc metallopeptidase (S. cerevisiae)	AK136208|Oma1|67013|OMA1 homolog, zinc metallopeptidase (S. cerevisiae)	AK008020|Oma1|67013|OMA1 homolog, zinc metallopeptidase (S. cerevisiae)	NM_025909|Oma1|67013|OMA1 homolog, zinc metallopeptidase (S. cerevisiae)
mm9_v1_chr16_+_59302980_59302980	0.0057886	NKX3-2.p2	BC128025|Olfr203|258479|olfactory receptor 203	NM_146486|Olfr203|258479|olfactory receptor 203
mm9_v1_chr2_-_35835071_35835146	0.00575291	NKX3-2.p2	AM690755|Ttll11|74410|tubulin tyrosine ligase-like family, member 11	NM_028921|Ttll11|74410|tubulin tyrosine ligase-like family, member 11	NM_029774|Ttll11|74410|tubulin tyrosine ligase-like family, member 11	AK037481|Ttll11|74410|tubulin tyrosine ligase-like family, member 11
mm9_v1_chr5_+_116096907_116097001	0.0057307	NKX3-2.p2	
mm9_v1_chr11_+_105043224_105043367	0.00572845	NKX3-2.p2	BC066198|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)	AK089925|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)
mm9_v1_chr18_+_37581071_37581102	0.00571879	NKX3-2.p2	AK078189|Pcdhb11|93882|protocadherin beta 11	NM_053136|Pcdhb11|93882|protocadherin beta 11	AK160803|Pcdhb11|93882|protocadherin beta 11
mm9_v1_chr15_-_76368725_76368784	0.0057099	NKX3-2.p2	AK208517|Fbxl6|30840|F-box and leucine-rich repeat protein 6
mm9_v1_chr15_-_10967722_10967745	0.00569687	NKX3-2.p2	AK084001|Rxfp3|239336|relaxin family peptide receptor 3	NM_178717|Rxfp3|239336|relaxin family peptide receptor 3	AK043414|Rxfp3|239336|relaxin family peptide receptor 3
mm9_v1_chrX_+_133242520_133242603	0.00564953	NKX3-2.p2	BC083157|Tceal1|237052|transcription elongation factor A (SII)-like 1	BC011290|Tceal1|237052|transcription elongation factor A (SII)-like 1	NM_146236|Tceal1|237052|transcription elongation factor A (SII)-like 1
mm9_v1_chr1_+_174012909_174013066	0.00563064	NKX3-2.p2	AK171625|Copa|12847|coatomer protein complex subunit alpha	AK043479|Copa|12847|coatomer protein complex subunit alpha	AK164910|Copa|12847|coatomer protein complex subunit alpha	BC047429|Copa|12847|coatomer protein complex subunit alpha	BC024070|Copa|12847|coatomer protein complex subunit alpha	AF248032|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chrX_-_71167183_71167282	0.00559571	NKX3-2.p2	BC027219|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AK009697|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AK014469|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AK003806|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AK078700|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AY183136|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AY183137|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	NM_001177965|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	NM_019870|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10
mm9_v1_chr12_+_111724001_111724119	0.00558308	NKX3-2.p2	AB055635|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AB055636|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	U37353|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr17_-_46168654_46168719	0.00554982	NKX3-2.p2	AY707864|Vegfa|22339|vascular endothelial growth factor A	AY750956|Vegfa|22339|vascular endothelial growth factor A	AY750957|Vegfa|22339|vascular endothelial growth factor A	EF028705|Vegfa|22339|vascular endothelial growth factor A	BC061468|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr1_+_136328081_136328132	0.00554971	NKX3-2.p2	AK186237|Adipor1|72674|adiponectin receptor 1	AK204573|Adipor1|72674|adiponectin receptor 1	AK188561|Adipor1|72674|adiponectin receptor 1
mm9_v1_chr6_-_23600205_23600304	0.00554945	NKX3-2.p2	BC116423|Rnf133|386611|ring finger protein 133	BC116424|Rnf133|386611|ring finger protein 133	AK028082|Rnf133|386611|ring finger protein 133	NM_198251|Rnf133|386611|ring finger protein 133
mm9_v1_chr2_+_11627013_11627178	0.00554542	NKX3-2.p2	BC069881|Il15ra|16169|interleukin 15 receptor, alpha chain	AK040940|Il15ra|16169|interleukin 15 receptor, alpha chain	AK080000|Il15ra|16169|interleukin 15 receptor, alpha chain	BC022705|Il15ra|16169|interleukin 15 receptor, alpha chain	NM_133836|Il15ra|16169|interleukin 15 receptor, alpha chain	AY221616|Il15ra|16169|interleukin 15 receptor, alpha chain	AY221617|Il15ra|16169|interleukin 15 receptor, alpha chain	AY221618|Il15ra|16169|interleukin 15 receptor, alpha chain	AY221619|Il15ra|16169|interleukin 15 receptor, alpha chain
mm9_v1_chr11_+_75323840_75323968	0.00548629	NKX3-2.p2	AK160517|Rilp|280408|Rab interacting lysosomal protein
mm9_v1_chr9_+_91263809_91263809	0.00537279	NKX3-2.p2	AK046913|Zic4|22774|zinc finger protein of the cerebellum 4	NM_009576|Zic4|22774|zinc finger protein of the cerebellum 4
mm9_v1_chr19_-_13870096_13870098	0.00533567	NKX3-2.p2	BC111435|Olfr1497|258736|olfactory receptor 1497	NM_146741|Olfr1497|258736|olfactory receptor 1497
mm9_v1_chr3_-_36512237_36512327	0.00526352	NKX3-2.p2	AK132661|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	BC031505|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK050291|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AF521645|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK018389|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	NM_027810|Bbs7|71492|Bardet-Biedl syndrome 7 (human)
mm9_v1_chr16_+_18498963_18499004	0.00522303	NKX3-2.p2	NM_023120|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK158210|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK166195|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK173227|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC029862|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC024635|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like
mm9_v1_chr7_+_25155279_25155362	0.00518697	NKX3-2.p2	AK010943|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_001163510|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_008433|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK155910|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	BC010274|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr13_-_35118959_35118964	0.00517147	NKX3-2.p2	
mm9_v1_chr15_-_32174187_32174189	0.00513391	NKX3-2.p2	AK007719|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chr8_+_122516412_122516427	0.00512909	NKX3-2.p2	AK149909|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK149925|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK150180|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK132171|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2
mm9_v1_chr6_+_94450307_94450362	0.00511661	NKX3-2.p2	NM_026255|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	AK015299|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	AK015954|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC037142|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC019156|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC049899|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
mm9_v1_chr11_-_101646571_101646623	0.00510256	NKX3-2.p2	AK166136|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	AK144590|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	AK144538|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	NM_008815|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chr12_+_111723922_111723992	0.00508961	NKX3-2.p2	AK031584|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	NM_001081457|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	NM_001081458|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	NM_012023|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	BC003979|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr7_-_73533163_73533231	0.00508234	NKX3-2.p2	BC072664|Lrrk1|233328|leucine-rich repeat kinase 1	AK171849|Lrrk1|233328|leucine-rich repeat kinase 1	AK086795|Lrrk1|233328|leucine-rich repeat kinase 1	AK147469|Lrrk1|233328|leucine-rich repeat kinase 1	AK051264|Lrrk1|233328|leucine-rich repeat kinase 1	NM_146191|Lrrk1|233328|leucine-rich repeat kinase 1
mm9_v1_chr7_+_29649404_29649463	0.00507307	NKX3-2.p2	NM_008496|Lgals7|16858|lectin, galactose binding, soluble 7	BC116838|Lgals7|16858|lectin, galactose binding, soluble 7	BC116840|Lgals7|16858|lectin, galactose binding, soluble 7
mm9_v1_chr2_+_172825687_172825696	0.00498352	NKX3-2.p2	BC059051|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK017746|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr17_-_54438241_54438358	0.00497184	NKX3-2.p2	AK034415|Slc5a7|63993|solute carrier family 5 (choline transporter), member 7	AK053063|Slc5a7|63993|solute carrier family 5 (choline transporter), member 7	NM_022025|Slc5a7|63993|solute carrier family 5 (choline transporter), member 7
mm9_v1_chr6_-_38825815_38825951	0.00493338	NKX3-2.p2	AF333791|Hipk2|15258|homeodomain interacting protein kinase 2	AF333792|Hipk2|15258|homeodomain interacting protein kinase 2	AF273680|Hipk2|15258|homeodomain interacting protein kinase 2	BC031904|Hipk2|15258|homeodomain interacting protein kinase 2	AF170301|Hipk2|15258|homeodomain interacting protein kinase 2	AF170302|Hipk2|15258|homeodomain interacting protein kinase 2	AF077659|Hipk2|15258|homeodomain interacting protein kinase 2
mm9_v1_chr10_+_79321979_79322100	0.00493181	NKX3-2.p2	BC008531|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr17_-_78817348_78817472	0.00492554	NKX3-2.p2	BC064130|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK033547|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK165595|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC096619|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AY382580|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	NM_199448|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK159545|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK157221|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK150241|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC052366|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)
mm9_v1_chr2_-_60719361_60719568	0.00490882	NKX3-2.p2	AK161102|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK164307|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK145897|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	NM_001141931|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	NM_001141932|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	BC057866|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr16_+_20621467_20621606	0.00490584	NKX3-2.p2	
mm9_v1_chr3_-_72861724_72861729	0.00488239	NKX3-2.p2	AK158856|Slitrk3|386750|SLIT and NTRK-like family, member 3
mm9_v1_chr11_-_106576380_106576409	0.00479721	NKX3-2.p2	BC085502|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr3_+_138868817_138868862	0.00479201	NKX3-2.p2	BC138108|B930007M17Rik|381476|RIKEN cDNA B930007M17 gene	BC138109|B930007M17Rik|381476|RIKEN cDNA B930007M17 gene	AK046955|B930007M17Rik|381476|RIKEN cDNA B930007M17 gene	NM_198659|B930007M17Rik|381476|RIKEN cDNA B930007M17 gene	AK161389|B930007M17Rik|381476|RIKEN cDNA B930007M17 gene
mm9_v1_chr16_-_45158709_45158787	0.00475261	NKX3-2.p2	AK030566|Slc35a5|74102|solute carrier family 35, member A5	AK003124|Slc35a5|74102|solute carrier family 35, member A5	AK052833|Slc35a5|74102|solute carrier family 35, member A5	BC011115|Slc35a5|74102|solute carrier family 35, member A5	AK085567|Slc35a5|74102|solute carrier family 35, member A5	AK033921|Slc35a5|74102|solute carrier family 35, member A5	AK170026|Slc35a5|74102|solute carrier family 35, member A5	AK034527|Slc35a5|74102|solute carrier family 35, member A5	AK150825|Slc35a5|74102|solute carrier family 35, member A5	AK151484|Slc35a5|74102|solute carrier family 35, member A5	NM_028756|Slc35a5|74102|solute carrier family 35, member A5
mm9_v1_chr12_-_55796770_55796822	0.00474631	NKX3-2.p2	AY882557|Eapp|66266|E2F-associated phosphoprotein	AK007442|Eapp|66266|E2F-associated phosphoprotein	AK012800|Eapp|66266|E2F-associated phosphoprotein
mm9_v1_chr11_+_80022584_80022586	0.00474208	NKX3-2.p2	AK032096|Rhot1|59040|ras homolog gene family, member T1	AK054472|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr2_+_26203297_26203537	0.00473529	NKX3-2.p2	AK007593|Gpsm1|67839|G-protein signalling modulator 1 (AGS3-like, C. elegans)	AK211070|Gpsm1|67839|G-protein signalling modulator 1 (AGS3-like, C. elegans)
mm9_v1_chr10_+_83185609_83185706	0.00472773	NKX3-2.p2	BC048550|1500009L16Rik|69784|RIKEN cDNA 1500009L16 gene	NM_001145198|1500009L16Rik|69784|RIKEN cDNA 1500009L16 gene	AK012407|1500009L16Rik|69784|RIKEN cDNA 1500009L16 gene	AK005183|1500009L16Rik|69784|RIKEN cDNA 1500009L16 gene
mm9_v1_chr6_+_86145477_86145494	0.00471351	NKX3-2.p2	AK162680|Tgfa|21802|transforming growth factor alpha	M92420|Tgfa|21802|transforming growth factor alpha
mm9_v1_chr12_+_56499761_56499884	0.00471063	NKX3-2.p2	NM_011968|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK152915|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK088143|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK161662|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	U60288|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	BC086685|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6
mm9_v1_chr10_+_80065598_80065660	0.00470553	NKX3-2.p2	AK019112|Scamp4|56214|secretory carrier membrane protein 4	NM_001100606|Adat3|100113398|adenosine deaminase, tRNA-specific 3, TAD2 homolog (S. cerevisiae)	NM_019575|Scamp4|56214|secretory carrier membrane protein 4	AK078226|Scamp4|56214|secretory carrier membrane protein 4	AK154094|Scamp4|56214|secretory carrier membrane protein 4	AK160755|Scamp4|56214|secretory carrier membrane protein 4	AK168554|Scamp4|56214|secretory carrier membrane protein 4	BC054104|Scamp4|56214|secretory carrier membrane protein 4	BC018215|Scamp4|56214|secretory carrier membrane protein 4	AF224721|Scamp4|56214|secretory carrier membrane protein 4
mm9_v1_chr4_-_102787201_102787227	0.00470361	NKX3-2.p2	AK078168|E030030F06Rik|320382|RIKEN cDNA E030030F06 gene	AK043370|E030030F06Rik|320382|RIKEN cDNA E030030F06 gene
mm9_v1_chr2_+_29475402_29475429	0.0046565	NKX3-2.p2	BC129881|Rapgef1|107746|Rap guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr11_-_94361203_94361265	0.00461154	NKX3-2.p2	BC016454|Epn3|71889|epsin 3	AK158031|Epn3|71889|epsin 3
mm9_v1_chr18_+_37925619_37925770	0.00458796	NKX3-2.p2	BC054528|Pcdhga12|93724|protocadherin gamma subfamily A, 12	U88550|Pcdhga12|93724|protocadherin gamma subfamily A, 12	AY013795|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr9_-_105397342_105397452	0.0045651	NKX3-2.p2	AK032255|Atp2c1|235574|ATPase, Ca++-sequestering	AK028393|Atp2c1|235574|ATPase, Ca++-sequestering	BC043706|Atp2c1|235574|ATPase, Ca++-sequestering	AK159918|Atp2c1|235574|ATPase, Ca++-sequestering	AK163049|Atp2c1|235574|ATPase, Ca++-sequestering	BC043091|Atp2c1|235574|ATPase, Ca++-sequestering	AK052958|Atp2c1|235574|ATPase, Ca++-sequestering	NM_175025|Atp2c1|235574|ATPase, Ca++-sequestering
mm9_v1_chr4_+_134479583_134479637	0.00451749	NKX3-2.p2	BC056986|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC046231|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr14_-_32643594_32643685	0.00450655	NKX3-2.p2	BC051456|Ankrd28|105522|ankyrin repeat domain 28	BC094609|Ankrd28|105522|ankyrin repeat domain 28	NM_001024604|Ankrd28|105522|ankyrin repeat domain 28
mm9_v1_chr19_+_24748487_24748497	0.00443389	NKX3-2.p2	AK086895|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	AK142952|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	BC087877|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	AK143762|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene	NM_183160|E030010A14Rik|226040|RIKEN cDNA E030010A14 gene
mm9_v1_chr14_-_47896464_47896499	0.0044253	NKX3-2.p2	BC063740|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1	AK042443|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1	AK036390|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1
mm9_v1_chr7_+_152101004_152101187	0.00439899	NKX3-2.p2	AK046447|Oraov1|72284|oral cancer overexpressed 1	AK008702|Oraov1|72284|oral cancer overexpressed 1	AK083244|Oraov1|72284|oral cancer overexpressed 1	AK169310|Oraov1|72284|oral cancer overexpressed 1	AK167712|Oraov1|72284|oral cancer overexpressed 1	BC013564|Oraov1|72284|oral cancer overexpressed 1	NM_028184|Oraov1|72284|oral cancer overexpressed 1	BC006906|Oraov1|72284|oral cancer overexpressed 1
mm9_v1_chr11_-_106576550_106576578	0.00439853	NKX3-2.p2	AK084527|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	AK169431|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	BC008519|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr9_+_45714587_45714651	0.0043985	NKX3-2.p2	AK050638|Rnf214|235315|ring finger protein 214	BC056456|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	NM_008794|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7
mm9_v1_chr17_+_80526993_80527046	0.00432464	NKX3-2.p2	BC028818|Galm|319625|galactose mutarotase	AK085153|Galm|319625|galactose mutarotase	AK161687|Galm|319625|galactose mutarotase	AK170014|Galm|319625|galactose mutarotase	AK158120|Galm|319625|galactose mutarotase
mm9_v1_chr13_+_55736365_55736414	0.00432005	NKX3-2.p2	AK008639|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	AK137835|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	BC019403|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	NM_145975|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	AK088950|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	BC092240|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	BC028552|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
mm9_v1_chr17_+_27693518_27693641	0.00431711	NKX3-2.p2	NM_001025427|Hmga1|15361|high mobility group AT-hook 1	NM_001039356|Hmga1|15361|high mobility group AT-hook 1	NM_001166535|Hmga1|15361|high mobility group AT-hook 1	NM_001166536|Hmga1|15361|high mobility group AT-hook 1	NM_001166539|Hmga1|15361|high mobility group AT-hook 1	NM_001166540|Hmga1|15361|high mobility group AT-hook 1	NM_001166541|Hmga1|15361|high mobility group AT-hook 1	NM_001166542|Hmga1|15361|high mobility group AT-hook 1	NM_001166543|Hmga1|15361|high mobility group AT-hook 1	NM_001166544|Hmga1|15361|high mobility group AT-hook 1	NM_001166545|Hmga1|15361|high mobility group AT-hook 1	NM_001166546|Hmga1|15361|high mobility group AT-hook 1	NM_001166537|Hmga1|15361|high mobility group AT-hook 1	NM_016660|Hmga1|15361|high mobility group AT-hook 1	AK171334|Hmga1|15361|high mobility group AT-hook 1	AK155661|Hmga1|15361|high mobility group AT-hook 1	BC013455|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	AK010617|Hmga1|15361|high mobility group AT-hook 1	AK169783|Hmga1|15361|high mobility group AT-hook 1	NM_001166476|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	NM_001166477|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	AK154957|Hmga1|15361|high mobility group AT-hook 1	AK160036|Hmga1|15361|high mobility group AT-hook 1	BC008125|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	BC093496|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1
mm9_v1_chr1_-_43149260_43149340	0.00429029	NKX3-2.p2	AK159332|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	AK141742|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1
mm9_v1_chr12_-_56403949_56403990	0.00427107	NKX3-2.p2	BC024754|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028063|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AB041577|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK033405|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK163192|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK168298|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	NM_021529|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chr15_-_59205688_59205750	0.00426737	NKX3-2.p2	BC067035|E430025E21Rik|223593|RIKEN cDNA E430025E21 gene	NM_153548|E430025E21Rik|223593|RIKEN cDNA E430025E21 gene	AK128970|E430025E21Rik|223593|RIKEN cDNA E430025E21 gene
mm9_v1_chr6_-_92656148_92656177	0.00425989	NKX3-2.p2	BC099897|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001081146|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr10_+_75052084_75052401	0.00419721	NKX3-2.p2	AK140308|Ggt5|23887|gamma-glutamyltransferase 5	AK049084|Ggt5|23887|gamma-glutamyltransferase 5	AK052183|Ggt5|23887|gamma-glutamyltransferase 5	BC089585|Ggt5|23887|gamma-glutamyltransferase 5	NM_011820|Ggt5|23887|gamma-glutamyltransferase 5	AK085788|Ggt5|23887|gamma-glutamyltransferase 5	AF077765|Ggt5|23887|gamma-glutamyltransferase 5	AK170326|Ggt5|23887|gamma-glutamyltransferase 5	BC051971|Ggt5|23887|gamma-glutamyltransferase 5	BC113775|Ggt5|23887|gamma-glutamyltransferase 5
mm9_v1_chr3_+_89263114_89263157	0.0041967	NKX3-2.p2	AK150483|Pmvk|68603|phosphomevalonate kinase	AK168358|Pmvk|68603|phosphomevalonate kinase
mm9_v1_chr17_+_6106857_6106857	0.0041846	NKX3-2.p2	AK043826|Tulp4|68842|tubby like protein 4	AK084820|Tulp4|68842|tubby like protein 4
mm9_v1_chr11_+_100870759_100870810	0.00418442	NKX3-2.p2	NM_016920|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	AK029316|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	AF218249|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	AK036530|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	AK158786|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	BC066839|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	BC071182|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1	BC001995|Atp6v0a1|11975|ATPase, H+ transporting, lysosomal V0 subunit A1
mm9_v1_chrX_+_100551808_100551914	0.00418277	NKX3-2.p2	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr2_-_60221287_60221381	0.00414538	NKX3-2.p2	AF395445|Ly75|17076|lymphocyte antigen 75	NM_013825|Ly75|17076|lymphocyte antigen 75	BC150734|Ly75|17076|lymphocyte antigen 75	U19271|Ly75|17076|lymphocyte antigen 75	AK049301|Ly75|17076|lymphocyte antigen 75	AK144922|Ly75|17076|lymphocyte antigen 75	AK157921|Ly75|17076|lymphocyte antigen 75
mm9_v1_chr8_-_13105342_13105458	0.00414339	NKX3-2.p2	BC118533|Pcid2|234069|PCI domain containing 2	NM_178708|Pcid2|234069|PCI domain containing 2	AK082891|Pcid2|234069|PCI domain containing 2	BC072621|Pcid2|234069|PCI domain containing 2
mm9_v1_chr12_+_17355232_17355314	0.00413547	NKX3-2.p2	AK160864|Nol10|217431|nucleolar protein 10	AK166160|Nol10|217431|nucleolar protein 10	AK164400|Nol10|217431|nucleolar protein 10	AK148210|Nol10|217431|nucleolar protein 10	BC086676|Nol10|217431|nucleolar protein 10	NM_001008421|Nol10|217431|nucleolar protein 10
mm9_v1_chr5_+_108697913_108698008	0.00411621	NKX3-2.p2	AK075713|Dr1|13486|down-regulator of transcription 1	NM_026106|Dr1|13486|down-regulator of transcription 1	AK144749|Dr1|13486|down-regulator of transcription 1	AK007230|Dr1|13486|down-regulator of transcription 1	AK090113|Dr1|13486|down-regulator of transcription 1	AK146573|Dr1|13486|down-regulator of transcription 1	AK031057|Dr1|13486|down-regulator of transcription 1	AK139866|Dr1|13486|down-regulator of transcription 1	AK018040|Dr1|13486|down-regulator of transcription 1
mm9_v1_chr11_-_79337178_79337240	0.00410885	NKX3-2.p2	AK171686|Evi2b|216984|ecotropic viral integration site 2b	BC017548|Evi2b|216984|ecotropic viral integration site 2b	AK170476|Evi2b|216984|ecotropic viral integration site 2b	AK039968|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr15_-_78360039_78360054	0.00409523	NKX3-2.p2	DQ002399|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	NM_028331|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	BC071187|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	AK154407|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6
mm9_v1_chrX_-_45944937_45944938	0.0040949	NKX3-2.p2	BC051397|Zfp280c|208968|zinc finger protein 280C	NM_001166650|Zfp280c|208968|zinc finger protein 280C	BC028839|Zfp280c|208968|zinc finger protein 280C
mm9_v1_chr8_+_129823507_129823551	0.00407564	NKX3-2.p2	AY856081|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	AY856082|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013581|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013580|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)
mm9_v1_chr7_+_80536124_80536202	0.00406897	NKX3-2.p2	AJ557513|Rgma|244058|RGM domain family, member A	AK145224|Rgma|244058|RGM domain family, member A	AK160661|Rgma|244058|RGM domain family, member A	AK141860|Rgma|244058|RGM domain family, member A
mm9_v1_chr13_-_34027843_34027864	0.00405747	NKX3-2.p2	AK169145|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	AK167295|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	AK033731|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	U25844|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	AK154700|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a	BC006766|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm9_v1_chr14_-_67627598_67627723	0.00405141	NKX3-2.p2	AK220143|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC049081|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK139950|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK004667|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC085237|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK018668|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK155040|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AY057069|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK013467|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK007920|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AF067395|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK168482|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK169391|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	NM_009761|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like
mm9_v1_chr4_-_63156984_63157036	0.00403962	NKX3-2.p2	AY739114|Whrn|73750|whirlin	AY739115|Whrn|73750|whirlin	AY739116|Whrn|73750|whirlin	AY739117|Whrn|73750|whirlin	AY739118|Whrn|73750|whirlin	AY739119|Whrn|73750|whirlin	AY739120|Whrn|73750|whirlin	NM_001008791|Whrn|73750|whirlin	NM_001008792|Whrn|73750|whirlin	NM_001008793|Whrn|73750|whirlin	NM_001008794|Whrn|73750|whirlin	NM_001008795|Whrn|73750|whirlin	NM_001008796|Whrn|73750|whirlin	NM_028640|Whrn|73750|whirlin	AK157955|Whrn|73750|whirlin
mm9_v1_chr3_+_63099408_63099509	0.00402237	NKX3-2.p2	AK076908|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr3_+_52072251_52072295	0.00402142	NKX3-2.p2	AK154041|Foxo1|56458|forkhead box O1	NM_019739|Foxo1|56458|forkhead box O1	AJ252157|Foxo1|56458|forkhead box O1
mm9_v1_chr5_-_123438493_123438509	0.00401493	NKX3-2.p2	AK087953|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr12_+_89599244_89599334	0.00398722	NKX3-2.p2	AK050868|Adck1|72113|aarF domain containing kinase 1	NM_028105|Adck1|72113|aarF domain containing kinase 1	AK044573|Adck1|72113|aarF domain containing kinase 1	BC010539|Adck1|72113|aarF domain containing kinase 1
mm9_v1_chr18_+_65210574_65210693	0.00398483	NKX3-2.p2	BC082281|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr2_-_90910439_90910494	0.0039003	NKX3-2.p2	BC100463|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13
mm9_v1_chr6_-_115201790_115201797	0.00387303	NKX3-2.p2	AF282730|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr2_-_155755998_155756045	0.00384481	NKX3-2.p2	BC050884|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	BC057570|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK139488|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	NM_018888|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)
mm9_v1_chr16_-_50432421_50432504	0.00382546	NKX3-2.p2	AK044855|Bbx|70508|bobby sox homolog (Drosophila)	BC019456|Bbx|70508|bobby sox homolog (Drosophila)	BC066821|Bbx|70508|bobby sox homolog (Drosophila)	AF276951|Bbx|70508|bobby sox homolog (Drosophila)	BC064763|Bbx|70508|bobby sox homolog (Drosophila)	BC057869|Bbx|70508|bobby sox homolog (Drosophila)	AK157813|Bbx|70508|bobby sox homolog (Drosophila)	AK049516|Bbx|70508|bobby sox homolog (Drosophila)	AF454943|Bbx|70508|bobby sox homolog (Drosophila)	AK017487|Bbx|70508|bobby sox homolog (Drosophila)	AK029747|Bbx|70508|bobby sox homolog (Drosophila)	AK167724|Bbx|70508|bobby sox homolog (Drosophila)	NM_027444|Bbx|70508|bobby sox homolog (Drosophila)
mm9_v1_chr16_+_21423190_21423247	0.00382435	NKX3-2.p2	NM_001081366|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	AK122375|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)
mm9_v1_chr9_+_43901941_43901990	0.00380087	NKX3-2.p2	AK047204|Usp2|53376|ubiquitin specific peptidase 2	AK081112|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr6_+_91162756_91162777	0.00379094	NKX3-2.p2	NM_001081437|Fbln2|14115|fibulin 2	NM_007992|Fbln2|14115|fibulin 2	BC005443|Fbln2|14115|fibulin 2
mm9_v1_chr3_+_88489708_88489765	0.00377269	NKX3-2.p2	NM_028814|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK170490|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK038617|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	BC006621|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK012969|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK173057|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK083018|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK164337|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK020778|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene
mm9_v1_chr15_+_89284341_89284359	0.00375073	NKX3-2.p2	NM_021921|Mapk8ip2|60597|mitogen-activated protein kinase 8 interacting protein 2
mm9_v1_chr16_+_96422243_96422259	0.00374518	NKX3-2.p2	AJ272170|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein	BC055870|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein
mm9_v1_chr6_-_120244447_120244576	0.00369582	NKX3-2.p2	BC139798|B4galnt3|330406|beta-1,4-N-acetyl-galactosaminyl transferase 3	AB114826|B4galnt3|330406|beta-1,4-N-acetyl-galactosaminyl transferase 3	NM_198884|B4galnt3|330406|beta-1,4-N-acetyl-galactosaminyl transferase 3
mm9_v1_chr2_+_34657837_34657902	0.00367186	NKX3-2.p2	AK019757|4930550L05Rik|78040|RIKEN cDNA 4930550L05 gene
mm9_v1_chr18_-_61336629_61336741	0.00364713	NKX3-2.p2	BC079580|Hmgxb3|106894|HMG box domain containing 3	AK088852|Hmgxb3|106894|HMG box domain containing 3	AK034086|Hmgxb3|106894|HMG box domain containing 3	AK041866|Hmgxb3|106894|HMG box domain containing 3	AK144993|Hmgxb3|106894|HMG box domain containing 3	NM_178277|Hmgxb3|106894|HMG box domain containing 3	AB045322|Hmgxb3|106894|HMG box domain containing 3	NM_134134|Hmgxb3|106894|HMG box domain containing 3
mm9_v1_chr19_+_46402710_46402717	0.0036205	NKX3-2.p2	AK145009|Fbxl15|68431|F-box and leucine-rich repeat protein 15
mm9_v1_chrX_-_45525047_45525061	0.00359457	NKX3-2.p2	
mm9_v1_chr7_-_88490106_88490126	0.00359097	NKX3-2.p2	AK012781|Rps17|20068|ribosomal protein S17	AK162335|Rps17|20068|ribosomal protein S17	AK162022|Rps17|20068|ribosomal protein S17	AK167206|Rps17|20068|ribosomal protein S17	BC086900|Rps17|20068|ribosomal protein S17	BC086901|Rps17|20068|ribosomal protein S17	AK010647|Rps17|20068|ribosomal protein S17	NM_009092|Rps17|20068|ribosomal protein S17	AK007992|Rps17|20068|ribosomal protein S17
mm9_v1_chr17_-_45823145_45823192	0.00358483	NKX3-2.p2	NM_198167|Tmem63b|224807|transmembrane protein 63b	AK159673|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr17_-_26122462_26122576	0.00358039	NKX3-2.p2	AK185014|Solh|50817|small optic lobes homolog (Drosophila)
mm9_v1_chr3_-_89074399_89074491	0.0035367	NKX3-2.p2	AK177059|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK170162|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK014305|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK079716|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK045924|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	BC014292|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	X96618|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK158862|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	NM_009057|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1
mm9_v1_chr17_-_46811186_46811300	0.00351235	NKX3-2.p2	BC011248|Rrp36|224823|ribosomal RNA processing 36 homolog (S. cerevisiae)	NM_144857|Rrp36|224823|ribosomal RNA processing 36 homolog (S. cerevisiae)	AK148164|Rrp36|224823|ribosomal RNA processing 36 homolog (S. cerevisiae)	AK148237|Rrp36|224823|ribosomal RNA processing 36 homolog (S. cerevisiae)
mm9_v1_chr2_+_28496752_28496773	0.0035102	NKX3-2.p2	AK030318|Tsc1|64930|tuberous sclerosis 1	AJ271912|Tsc1|64930|tuberous sclerosis 1	AK147428|Tsc1|64930|tuberous sclerosis 1	NM_022887|Tsc1|64930|tuberous sclerosis 1	AK083363|Tsc1|64930|tuberous sclerosis 1	AK078140|Tsc1|64930|tuberous sclerosis 1	AK154416|Tsc1|64930|tuberous sclerosis 1
mm9_v1_chr2_-_130250376_130250436	0.00350078	NKX3-2.p2	NM_001114541|Fam113a|319513|family with sequence similarity 113, member A	BC064802|Fam113a|319513|family with sequence similarity 113, member A	AK031469|Fam113a|319513|family with sequence similarity 113, member A
mm9_v1_chr8_-_109580546_109580561	0.00340556	NKX3-2.p2	AB041610|Cog8|97484|component of oligomeric golgi complex 8
mm9_v1_chr8_-_55606109_55606134	0.00340485	NKX3-2.p2	AK051731|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)
mm9_v1_chr4_+_63023478_63023520	0.00339958	NKX3-2.p2	NM_011016|Orm2|18406|orosomucoid 2	BC057985|Orm2|18406|orosomucoid 2	M27009|Orm2|18406|orosomucoid 2
mm9_v1_chr10_-_39977451_39977507	0.00339633	NKX3-2.p2	AK005261|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK007816|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK162053|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK168070|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK010514|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	NM_026113|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	BC048446|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha
mm9_v1_chr16_-_4077714_4077843	0.00339488	NKX3-2.p2	AK188521|Trap1|68015|TNF receptor-associated protein 1	BC006864|Trap1|68015|TNF receptor-associated protein 1	BC006685|Trap1|68015|TNF receptor-associated protein 1	AK002409|Trap1|68015|TNF receptor-associated protein 1	AK088471|Trap1|68015|TNF receptor-associated protein 1	AK162067|Trap1|68015|TNF receptor-associated protein 1	AK167181|Trap1|68015|TNF receptor-associated protein 1	BC022912|Trap1|68015|TNF receptor-associated protein 1	AK010341|Trap1|68015|TNF receptor-associated protein 1	NM_026508|Trap1|68015|TNF receptor-associated protein 1	AK143494|Trap1|68015|TNF receptor-associated protein 1
mm9_v1_chr4_+_125181288_125181474	0.00338107	NKX3-2.p2	NM_008049|Ftl2|14337|ferritin light chain 2	AK145265|Ftl1|14325|ferritin light chain 1	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene	BC106145|Ftl1|14325|ferritin light chain 1	BC150761|Ftl2|14337|ferritin light chain 2	S89400|Ftl2|14337|ferritin light chain 2
mm9_v1_chr13_-_45648492_45648493	0.00338023	NKX3-2.p2	AK019314|2900016G23Rik|78659|RIKEN cDNA 2900016G23 gene
mm9_v1_chr5_-_90652986_90653036	0.00337072	NKX3-2.p2	AK156053|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC138972|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145479|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145486|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145728|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001033310|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001163456|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr16_-_32003226_32003372	0.00336061	NKX3-2.p2	AK158338|Senp5|320213|SUMO/sentrin specific peptidase 5	AY522918|Senp5|320213|SUMO/sentrin specific peptidase 5	BC080830|Senp5|320213|SUMO/sentrin specific peptidase 5	AK043171|Senp5|320213|SUMO/sentrin specific peptidase 5	AK042087|Senp5|320213|SUMO/sentrin specific peptidase 5	AK028177|Senp5|320213|SUMO/sentrin specific peptidase 5	NM_177103|Senp5|320213|SUMO/sentrin specific peptidase 5
mm9_v1_chr5_+_111759771_111759826	0.00333707	NKX3-2.p2	AK028235|Pitpnb|56305|phosphatidylinositol transfer protein, beta	NM_019640|Pitpnb|56305|phosphatidylinositol transfer protein, beta	U46934|Pitpnb|56305|phosphatidylinositol transfer protein, beta	BC034676|Pitpnb|56305|phosphatidylinositol transfer protein, beta
mm9_v1_chrX_+_50144260_50144428	0.00332986	NKX3-2.p2	AK134708|Ccdc160|434778|coiled-coil domain containing 160	NM_001034059|Ccdc160|434778|coiled-coil domain containing 160	BC138946|Ccdc160|434778|coiled-coil domain containing 160	BC138947|Ccdc160|434778|coiled-coil domain containing 160
mm9_v1_chr14_+_55502261_55502285	0.00325941	NKX3-2.p2	AF030769|Bcl2l2|12050|BCL2-like 2	NM_007537|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr19_+_46782153_46782204	0.00323584	NKX3-2.p2	AK009814|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr3_-_90499611_90499616	0.00321414	NKX3-2.p2	AK143826|S100a9|20202|S100 calcium binding protein A9 (calgranulin B)	M83219|S100a9|20202|S100 calcium binding protein A9 (calgranulin B)	NM_009114|S100a9|20202|S100 calcium binding protein A9 (calgranulin B)
mm9_v1_chr4_+_122731563_122731731	0.00320881	NKX3-2.p2	AK188355|Trit1|66966|tRNA isopentenyltransferase 1	AK219389|Trit1|66966|tRNA isopentenyltransferase 1	AK189511|Trit1|66966|tRNA isopentenyltransferase 1
mm9_v1_chr7_-_31729018_31729052	0.00320335	NKX3-2.p2	BC021587|Hamp|84506|hepcidin antimicrobial peptide	AF297664|Hamp|84506|hepcidin antimicrobial peptide	AF503444|Hamp|84506|hepcidin antimicrobial peptide	NM_032541|Hamp|84506|hepcidin antimicrobial peptide
mm9_v1_chr2_+_88231404_88231405	0.00319307	NKX3-2.p2	BC140109|Olfr1178|258203|olfactory receptor 1178	BC140153|Olfr1178|258203|olfactory receptor 1178	BC143174|Olfr1178|258203|olfactory receptor 1178	NM_001011868|Olfr1178|258203|olfactory receptor 1178
mm9_v1_chr2_+_75670242_75670248	0.00318059	NKX3-2.p2	AK053686|Agps|228061|alkylglycerone phosphate synthase	BC063086|Agps|228061|alkylglycerone phosphate synthase
mm9_v1_chr11_-_79067893_79067979	0.0031789	NKX3-2.p2	AF033186|Wsb1|78889|WD repeat and SOCS box-containing 1	BC053391|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr12_-_56403648_56403785	0.00316521	NKX3-2.p2	AK017550|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK013403|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138295|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138296|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AJ238247|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK087572|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK015746|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK040589|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK088240|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028254|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chr5_-_3596078_3596116	0.00315141	NKX3-2.p2	AK047811|C030048B08Rik|269623|RIKEN cDNA C030048B08 gene	AK041876|C030048B08Rik|269623|RIKEN cDNA C030048B08 gene
mm9_v1_chr11_+_98273930_98273964	0.00315092	NKX3-2.p2	AK031099|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK083669|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm9_v1_chr17_+_25270317_25270453	0.0030271	NKX3-2.p2	AK030444|Clcn7|26373|chloride channel 7	NM_011930|Clcn7|26373|chloride channel 7	BC054799|Clcn7|26373|chloride channel 7	BC050907|Clcn7|26373|chloride channel 7	BC053049|Clcn7|26373|chloride channel 7	AK128981|Clcn7|26373|chloride channel 7
mm9_v1_chrX_-_9046362_9046456	0.00299046	NKX3-2.p2	U43384|Cybb|13058|cytochrome b-245, beta polypeptide	AK033570|Cybb|13058|cytochrome b-245, beta polypeptide	AK053920|Cybb|13058|cytochrome b-245, beta polypeptide	AK079926|Cybb|13058|cytochrome b-245, beta polypeptide	BC071229|Cybb|13058|cytochrome b-245, beta polypeptide	BC042838|Cybb|13058|cytochrome b-245, beta polypeptide	AK152257|Cybb|13058|cytochrome b-245, beta polypeptide	AK153154|Cybb|13058|cytochrome b-245, beta polypeptide	AK153259|Cybb|13058|cytochrome b-245, beta polypeptide	AK171526|Cybb|13058|cytochrome b-245, beta polypeptide	FJ168469|Cybb|13058|cytochrome b-245, beta polypeptide	AK154126|Cybb|13058|cytochrome b-245, beta polypeptide	NM_007807|Cybb|13058|cytochrome b-245, beta polypeptide
mm9_v1_chr12_+_85758189_85758266	0.00299035	NKX3-2.p2	AK016795|Rnf113a2|66381|ring finger protein 113A2	BC116426|Rnf113a2|66381|ring finger protein 113A2	BC058194|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr6_-_49214015_49214054	0.00294945	NKX3-2.p2	AK170599|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076230|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK089980|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK171708|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK005187|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	NM_198102|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK148552|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr5_+_3543815_3543891	0.00291414	NKX3-2.p2	AK008115|Fam133b|68152|family with sequence similarity 133, member B	AK019188|Fam133b|68152|family with sequence similarity 133, member B	NM_001042501|Fam133b|68152|family with sequence similarity 133, member B	AK020011|Fam133b|68152|family with sequence similarity 133, member B	BC147310|Fam133b|68152|family with sequence similarity 133, member B	BC147311|Fam133b|68152|family with sequence similarity 133, member B	BC172033|Fam133b|68152|family with sequence similarity 133, member B	BC027051|Fam133b|68152|family with sequence similarity 133, member B	AK161505|Fam133b|68152|family with sequence similarity 133, member B
mm9_v1_chr1_-_121970345_121970394	0.0028826	NKX3-2.p2	BC024613|Tmem37|170706|transmembrane protein 37	AK050134|Tmem37|170706|transmembrane protein 37	NM_019432|Tmem37|170706|transmembrane protein 37	AK086093|Tmem37|170706|transmembrane protein 37	AK002424|Tmem37|170706|transmembrane protein 37
mm9_v1_chr5_+_150480804_150480876	0.00286037	NKX3-2.p2	NM_001081204|B3galtl|381694|beta 1,3-galactosyltransferase-like	AK089440|B3galtl|381694|beta 1,3-galactosyltransferase-like	AK145082|B3galtl|381694|beta 1,3-galactosyltransferase-like	AB253762|B3galtl|381694|beta 1,3-galactosyltransferase-like
mm9_v1_chr11_+_115836022_115836269	0.00281389	NKX3-2.p2	L04678|Itgb4|192897|integrin beta 4	AK147424|Itgb4|192897|integrin beta 4	NM_001005608|Itgb4|192897|integrin beta 4	NM_133663|Itgb4|192897|integrin beta 4	AK048888|Itgb4|192897|integrin beta 4
mm9_v1_chr10_+_127525538_127525558	0.00280724	NKX3-2.p2	AK193315|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK201737|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212560|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK213511|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216817|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217965|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217971|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220050|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr12_+_73542852_73542935	0.00280006	NKX3-2.p2	AK029802|Lrrc9|78257|leucine rich repeat containing 9	NM_001142728|Lrrc9|78257|leucine rich repeat containing 9	NM_030070|Lrrc9|78257|leucine rich repeat containing 9	AK019545|Lrrc9|78257|leucine rich repeat containing 9	AK015292|Lrrc9|78257|leucine rich repeat containing 9
mm9_v1_chr14_+_25309955_25309963	0.00276509	NKX3-2.p2	BC081457|Rps24|20088|ribosomal protein S24	BC091748|Rps24|20088|ribosomal protein S24	X60289|Rps24|20088|ribosomal protein S24
mm9_v1_chrX_+_23270202_23270284	0.00276198	NKX3-2.p2	AK049071|Wdr44|72404|WD repeat domain 44	AK088885|Wdr44|72404|WD repeat domain 44	BC068151|Wdr44|72404|WD repeat domain 44	NM_175180|Wdr44|72404|WD repeat domain 44	BC049191|Wdr44|72404|WD repeat domain 44	AK011669|Wdr44|72404|WD repeat domain 44
mm9_v1_chr18_+_11997728_11997798	0.0027489	NKX3-2.p2	AK156273|Cables1|63955|CDK5 and Abl enzyme substrate 1	AF133208|Cables1|63955|CDK5 and Abl enzyme substrate 1	NM_001146287|Cables1|63955|CDK5 and Abl enzyme substrate 1	NM_022021|Cables1|63955|CDK5 and Abl enzyme substrate 1	BC145142|Cables1|63955|CDK5 and Abl enzyme substrate 1	BC150714|Cables1|63955|CDK5 and Abl enzyme substrate 1
mm9_v1_chr16_+_16870878_16870901	0.00273467	NKX3-2.p2	BC006614|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr16_-_56886260_56886287	0.00273229	NKX3-2.p2	AK049837|Tmem45a|56277|transmembrane protein 45a	NM_019631|Tmem45a|56277|transmembrane protein 45a	AK081478|Tmem45a|56277|transmembrane protein 45a	BC064715|Tmem45a|56277|transmembrane protein 45a
mm9_v1_chr17_-_47748155_47748220	0.00269642	NKX3-2.p2	BC017530|Bysl|53414|bystin-like	AK032993|Bysl|53414|bystin-like	AK019239|Bysl|53414|bystin-like	AK168301|Bysl|53414|bystin-like
mm9_v1_chr12_-_86113816_86113911	0.00269555	NKX3-2.p2	AB021289|Npc2|67963|Niemann Pick type C2	AK149805|Npc2|67963|Niemann Pick type C2	AK151067|Npc2|67963|Niemann Pick type C2	AK154838|Npc2|67963|Niemann Pick type C2	AK008603|Npc2|67963|Niemann Pick type C2	AK151133|Npc2|67963|Niemann Pick type C2	AK152236|Npc2|67963|Niemann Pick type C2	AK153020|Npc2|67963|Niemann Pick type C2	AK153203|Npc2|67963|Niemann Pick type C2	AK167869|Npc2|67963|Niemann Pick type C2	AK170327|Npc2|67963|Niemann Pick type C2	BC003471|Npc2|67963|Niemann Pick type C2	AK165263|Npc2|67963|Niemann Pick type C2	AK009127|Npc2|67963|Niemann Pick type C2	AK159154|Npc2|67963|Niemann Pick type C2	BC007190|Npc2|67963|Niemann Pick type C2	AK012239|Npc2|67963|Niemann Pick type C2
mm9_v1_chr7_-_148042164_148042281	0.00268116	NKX3-2.p2	AK011508|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	BC019730|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	AK161239|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	NM_018742|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like
mm9_v1_chrX_-_49034778_49034778	0.00267791	NKX3-2.p2	NM_001077202|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr8_+_96561180_96561211	0.00266094	NKX3-2.p2	AK122532|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK164189|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr17_-_74397195_74397255	0.0026552	NKX3-2.p2	AK138946|Srd5a2|94224|steroid 5 alpha-reductase 2	BC125510|Srd5a2|94224|steroid 5 alpha-reductase 2	AB049456|Srd5a2|94224|steroid 5 alpha-reductase 2	NM_053188|Srd5a2|94224|steroid 5 alpha-reductase 2
mm9_v1_chrM_+_9458_9465	0.00264544	NKX3-2.p2	AK139029|ND3|17718|NADH dehydrogenase subunit 3
mm9_v1_chr11_+_117193594_117193626	0.00264203	NKX3-2.p2	NM_001113488|Sept9|53860|septin 9
mm9_v1_chr2_+_34729973_34730037	0.00263151	NKX3-2.p2	AK021330|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	BC021771|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr16_-_19983049_19983121	0.00261202	NKX3-2.p2	AY350736|Klhl6|239743|kelch-like 6 (Drosophila)	BC100568|Klhl6|239743|kelch-like 6 (Drosophila)	NM_183390|Klhl6|239743|kelch-like 6 (Drosophila)
mm9_v1_chr14_+_51427582_51427645	0.00256826	NKX3-2.p2	AK076193|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	AK141876|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	AJ007780|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	BC052000|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	BC062150|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	NM_009632|Parp2|11546|poly (ADP-ribose) polymerase family, member 2	AF072521|Parp2|11546|poly (ADP-ribose) polymerase family, member 2
mm9_v1_chr5_+_124566251_124566301	0.00256686	NKX3-2.p2	AK133934|Arl6ip4|65105|ADP-ribosylation factor-like 6 interacting protein 4
mm9_v1_chr12_+_103521251_103521297	0.0025584	NKX3-2.p2	AK154506|Rin3|217835|Ras and Rab interactor 3	AK032205|Rin3|217835|Ras and Rab interactor 3	NM_177620|Rin3|217835|Ras and Rab interactor 3	AY265356|Rin3|217835|Ras and Rab interactor 3
mm9_v1_chr7_+_87487977_87488032	0.00253294	NKX3-2.p2	BC038310|Hddc3|68695|HD domain containing 3	BC055847|Hddc3|68695|HD domain containing 3	AK004078|Hddc3|68695|HD domain containing 3	NM_026812|Hddc3|68695|HD domain containing 3
mm9_v1_chr1_-_65003291_65003407	0.00243387	NKX3-2.p2	AK034959|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	BC063098|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	NM_001039493|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3
mm9_v1_chr15_+_81626455_81626512	0.00242272	NKX3-2.p2	AJ223207|Zc3h7b|20286|zinc finger CCCH type containing 7B
mm9_v1_chr11_+_80022524_80022572	0.00241996	NKX3-2.p2	AK147801|Rhot1|59040|ras homolog gene family, member T1	AK167502|Rhot1|59040|ras homolog gene family, member T1	NM_001163354|Rhot1|59040|ras homolog gene family, member T1	NM_001163355|Rhot1|59040|ras homolog gene family, member T1	NM_021536|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr4_-_119088052_119088125	0.00235381	NKX3-2.p2	AK078362|Ccdc30|73332|coiled-coil domain containing 30	BC114436|Ccdc30|73332|coiled-coil domain containing 30	AK163185|Ccdc30|73332|coiled-coil domain containing 30	AK225009|Ccdc30|73332|coiled-coil domain containing 30	AK005616|Ccdc30|73332|coiled-coil domain containing 30	AK148014|Ccdc30|73332|coiled-coil domain containing 30	AK225018|Ccdc30|73332|coiled-coil domain containing 30	AK079015|Ccdc30|73332|coiled-coil domain containing 30	NM_029286|Ccdc30|73332|coiled-coil domain containing 30
mm9_v1_chr13_+_115608425_115608505	0.00234563	NKX3-2.p2	NM_001113374|Mocs2|17434|molybdenum cofactor synthesis 2	NM_001113375|Mocs2|17434|molybdenum cofactor synthesis 2	NM_013826|Mocs2|17434|molybdenum cofactor synthesis 2	AK010112|Mocs2|17434|molybdenum cofactor synthesis 2	AK002719|Mocs2|17434|molybdenum cofactor synthesis 2	AK078782|Mocs2|17434|molybdenum cofactor synthesis 2	BC004631|Mocs2|17434|molybdenum cofactor synthesis 2	BC024371|Mocs2|17434|molybdenum cofactor synthesis 2	AF091872|Mocs2|17434|molybdenum cofactor synthesis 2
mm9_v1_chr11_-_5161536_5161672	0.00232038	NKX3-2.p2	BC049771|Kremen1|84035|kringle containing transmembrane protein 1	AB059617|Kremen1|84035|kringle containing transmembrane protein 1	BC082546|Kremen1|84035|kringle containing transmembrane protein 1	NM_032396|Kremen1|84035|kringle containing transmembrane protein 1	AK081707|Kremen1|84035|kringle containing transmembrane protein 1	BC138464|Kremen1|84035|kringle containing transmembrane protein 1	BC138465|Kremen1|84035|kringle containing transmembrane protein 1	AK141321|Kremen1|84035|kringle containing transmembrane protein 1
mm9_v1_chr10_+_39089594_39089612	0.0023027	NKX3-2.p2	AK156584|Fyn|14360|Fyn proto-oncogene	AK171646|Fyn|14360|Fyn proto-oncogene	NM_001122892|Fyn|14360|Fyn proto-oncogene	NM_001122893|Fyn|14360|Fyn proto-oncogene	NM_008054|Fyn|14360|Fyn proto-oncogene	BC092217|Fyn|14360|Fyn proto-oncogene
mm9_v1_chr4_-_117567163_117567203	0.00228674	NKX3-2.p2	
mm9_v1_chr11_+_69906223_69906270	0.00226803	NKX3-2.p2	X53042|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr15_-_36070139_36070154	0.00226375	NKX3-2.p2	AK158239|Rgs22|626596|regulator of G-protein signalling 22	NM_001195748|Rgs22|626596|regulator of G-protein signalling 22
mm9_v1_chr7_-_17402066_17402094	0.00226295	NKX3-2.p2	AK156156|Fkrp|243853|fukutin related protein	AK135089|Fkrp|243853|fukutin related protein	AK168308|Fkrp|243853|fukutin related protein	NM_173430|Fkrp|243853|fukutin related protein	AK166068|Fkrp|243853|fukutin related protein
mm9_v1_chr9_-_62996767_62996767	0.00226011	NKX3-2.p2	AK029916|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163758|Skor1|207667|SKI family transcriptional corepressor 1
mm9_v1_chr11_-_54891581_54891632	0.00224465	NKX3-2.p2	AK170686|Ccdc69|52570|coiled-coil domain containing 69	BC096763|Ccdc69|52570|coiled-coil domain containing 69	AK008760|Ccdc69|52570|coiled-coil domain containing 69	AK135942|Ccdc69|52570|coiled-coil domain containing 69	AK079810|Ccdc69|52570|coiled-coil domain containing 69	NM_177471|Ccdc69|52570|coiled-coil domain containing 69
mm9_v1_chr11_+_54716439_54716452	0.00224436	NKX3-2.p2	BC037134|Gpx3|14778|glutathione peroxidase 3	BC049235|Gpx3|14778|glutathione peroxidase 3	BC003339|Gpx3|14778|glutathione peroxidase 3	BC061950|Gpx3|14778|glutathione peroxidase 3	U13705|Gpx3|14778|glutathione peroxidase 3
mm9_v1_chr11_-_70223517_70223527	0.00223863	NKX3-2.p2	BC090620|Pelp1|75273|proline, glutamic acid and leucine rich protein 1
mm9_v1_chr2_+_163820920_163821078	0.0021834	NKX3-2.p2	AK150414|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK151294|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK004872|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK011389|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	NM_018753|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AF058797|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK083367|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK158932|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK204033|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC132121|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC138512|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr12_+_77518578_77518628	0.0021735	NKX3-2.p2	NM_001163103|Gm70|210762|predicted gene 70	AK133227|Gm70|210762|predicted gene 70
mm9_v1_chr18_-_6490848_6490911	0.00213257	NKX3-2.p2	AK040254|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	NM_027497|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	BC059708|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)
mm9_v1_chr9_+_106073265_106073336	0.00211268	NKX3-2.p2	BC094419|Wdr82|77305|WD repeat domain containing 82	BC157945|Wdr82|77305|WD repeat domain containing 82	BC158054|Wdr82|77305|WD repeat domain containing 82	BC157943|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr2_-_102026486_102026616	0.00206659	NKX3-2.p2	AK032208|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	AK029683|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	NM_178886|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC138178|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC145174|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC138177|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3
mm9_v1_chr11_+_94852523_94852536	0.00203915	NKX3-2.p2	AY508450|Ppp1r9b|217124|protein phosphatase 1, regulatory subunit 9B	NM_172261|Ppp1r9b|217124|protein phosphatase 1, regulatory subunit 9B
mm9_v1_chr2_+_151368197_151368330	0.00198063	NKX3-2.p2	NM_008019|Fkbp1a|14225|FK506 binding protein 1a	AK019362|Fkbp1a|14225|FK506 binding protein 1a	AK010693|Fkbp1a|14225|FK506 binding protein 1a	AK145400|Fkbp1a|14225|FK506 binding protein 1a	AK169242|Fkbp1a|14225|FK506 binding protein 1a	AK141261|Fkbp1a|14225|FK506 binding protein 1a	AK168333|Fkbp1a|14225|FK506 binding protein 1a
mm9_v1_chr12_-_106103214_106103237	0.00192754	NKX3-2.p2	BC141280|Clmn|94040|calmin
mm9_v1_chr16_-_16829386_16829548	0.00192373	NKX3-2.p2	AF173866|Spag6|50525|sperm associated antigen 6	BC090660|Spag6|50525|sperm associated antigen 6	AK053966|Spag6|50525|sperm associated antigen 6	AK005732|Spag6|50525|sperm associated antigen 6	BC100455|Spag6|50525|sperm associated antigen 6	AK054199|Spag6|50525|sperm associated antigen 6	NM_015773|Spag6|50525|sperm associated antigen 6	AK164680|Spag6|50525|sperm associated antigen 6
mm9_v1_chr1_+_120285634_120285634	0.00189912	NKX3-2.p2	AK042402|Clasp1|76707|CLIP associating protein 1	NM_001081276|Clasp1|76707|CLIP associating protein 1	NM_029709|Clasp1|76707|CLIP associating protein 1	NM_177548|Clasp1|76707|CLIP associating protein 1
mm9_v1_chr3_-_90195440_90195485	0.00189012	NKX3-2.p2	
mm9_v1_chr3_+_100726415_100726537	0.0018722	NKX3-2.p2	AK150574|Trim45|229644|tripartite motif-containing 45	AK153571|Trim45|229644|tripartite motif-containing 45	NM_001165952|Trim45|229644|tripartite motif-containing 45	NM_001165953|Trim45|229644|tripartite motif-containing 45	NM_194343|Trim45|229644|tripartite motif-containing 45	BC057358|Trim45|229644|tripartite motif-containing 45
mm9_v1_chr3_-_19935200_19935283	0.00187149	NKX3-2.p2	AK170581|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK034377|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK169855|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	BC058235|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)
mm9_v1_chr6_+_5340417_5340708	0.00186838	NKX3-2.p2	AK132068|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK018373|Asb4|65255|ankyrin repeat and SOCS box-containing 4	BC054745|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK076004|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AF155355|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK133894|Asb4|65255|ankyrin repeat and SOCS box-containing 4
mm9_v1_chr13_-_34027824_34027832	0.00185609	NKX3-2.p2	BC057950|Serpinb6a|20719|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm9_v1_chr7_+_109054350_109054514	0.00183224	NKX3-2.p2	NM_025605|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK010247|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK013389|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC126973|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK144476|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC020142|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK003509|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC092062|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK009320|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC096412|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK019947|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK203171|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene
mm9_v1_chr10_-_79446784_79446797	0.00181224	NKX3-2.p2	AY096036|ORF61|216157|open reading frame 61	AY096037|ORF61|216157|open reading frame 61
mm9_v1_chr16_-_36874886_36874911	0.00176413	NKX3-2.p2	BC056626|Eaf2|106389|ELL associated factor 2	NM_134111|Eaf2|106389|ELL associated factor 2
mm9_v1_chr7_+_51720804_51720838	0.00176339	NKX3-2.p2	AK002587|Aspdh|68352|aspartate dehydrogenase domain containing	NM_026690|Aspdh|68352|aspartate dehydrogenase domain containing	BC019451|Aspdh|68352|aspartate dehydrogenase domain containing
mm9_v1_chr3_-_146394874_146394956	0.0017595	NKX3-2.p2	AK204254|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr14_+_31832347_31832368	0.00174255	NKX3-2.p2	BC023452|Pbrm1|66923|polybromo 1
mm9_v1_chr4_+_137772474_137772594	0.00173283	NKX3-2.p2	AK150784|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK166161|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	NM_001122896|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	NM_010470|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK004938|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK028181|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK050234|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK075725|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK043260|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK161041|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	BC020024|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	BC107687|Hp1bp3|15441|heterochromatin protein 1, binding protein 3
mm9_v1_chr13_-_39052356_39052405	0.00172006	NKX3-2.p2	AK077208|Slc35b3|108652|solute carrier family 35, member B3	AK079504|Slc35b3|108652|solute carrier family 35, member B3	BC006881|Slc35b3|108652|solute carrier family 35, member B3	AK076592|Slc35b3|108652|solute carrier family 35, member B3	NM_001170430|Slc35b3|108652|solute carrier family 35, member B3	NM_134060|Slc35b3|108652|solute carrier family 35, member B3
mm9_v1_chr8_-_96536437_96536583	0.00171048	NKX3-2.p2	BC040338|Amfr|23802|autocrine motility factor receptor	BC034538|Amfr|23802|autocrine motility factor receptor	AK038442|Amfr|23802|autocrine motility factor receptor	AK170716|Amfr|23802|autocrine motility factor receptor	AK157327|Amfr|23802|autocrine motility factor receptor	NM_011787|Amfr|23802|autocrine motility factor receptor
mm9_v1_chr8_+_4493501_4493520	0.00169964	NKX3-2.p2	AK028945|Lass4|67260|LAG1 homolog, ceramide synthase 4	BC003946|Lass4|67260|LAG1 homolog, ceramide synthase 4	AY029531|Lass4|67260|LAG1 homolog, ceramide synthase 4
mm9_v1_chr11_+_105829364_105829480	0.00169507	NKX3-2.p2	BC083109|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chr2_+_144419797_144419818	0.00168828	NKX3-2.p2	AK002610|Gm561|228715|predicted gene 561	NM_001033297|Gm561|228715|predicted gene 561	BC147042|Gm561|228715|predicted gene 561	BC147043|Gm561|228715|predicted gene 561	AK010324|Gm561|228715|predicted gene 561
mm9_v1_chr6_-_72287713_72287848	0.00168124	NKX3-2.p2	AK184796|Usp39|28035|ubiquitin specific peptidase 39	AK206422|Usp39|28035|ubiquitin specific peptidase 39
mm9_v1_chr13_+_112476313_112476385	0.00167828	NKX3-2.p2	AK147427|Mier3|218613|mesoderm induction early response 1, family member 3	NM_172593|Mier3|218613|mesoderm induction early response 1, family member 3
mm9_v1_chr3_+_96050607_96050778	0.00166344	NKX3-2.p2	BC094041|Hist2h3c1|15077|histone cluster 2, H3c1	NM_178216|Hist2h3c1|15077|histone cluster 2, H3c1	BC132488|Hist2h3c2-ps|97114|histone cluster 2, H3c2, pseudogene	BC132490|Hist2h3c2-ps|97114|histone cluster 2, H3c2, pseudogene
mm9_v1_chr5_-_137521896_137522032	0.00162905	NKX3-2.p2	AK002225|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	M62418|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	NM_007457|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	BC052692|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr14_+_21513864_21513981	0.00161445	NKX3-2.p2	
mm9_v1_chr2_+_79547936_79548278	0.00160062	NKX3-2.p2	AK051670|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	NM_172420|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC120706|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC132149|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK051449|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK157871|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK083940|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm9_v1_chr11_-_101755622_101755677	0.0015908	NKX3-2.p2	Z15103|Meox1|17285|mesenchyme homeobox 1	BC011082|Meox1|17285|mesenchyme homeobox 1	NM_010791|Meox1|17285|mesenchyme homeobox 1	AK052370|Meox1|17285|mesenchyme homeobox 1
mm9_v1_chr16_+_13358513_13358556	0.00158545	NKX3-2.p2	NM_153588|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr18_-_42421635_42421796	0.00158296	NKX3-2.p2	AK166827|Lars|107045|leucyl-tRNA synthetase	AK129337|Lars|107045|leucyl-tRNA synthetase	BC052715|Lars|107045|leucyl-tRNA synthetase	NM_134137|Lars|107045|leucyl-tRNA synthetase	AK009823|Lars|107045|leucyl-tRNA synthetase	AK010041|Lars|107045|leucyl-tRNA synthetase
mm9_v1_chr16_-_32868355_32868453	0.00157209	NKX3-2.p2	BC057307|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK042428|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170223|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK122221|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK030368|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC060601|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	NM_172615|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170002|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK171583|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC067390|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene
mm9_v1_chr14_+_35033231_35033322	0.00153206	NKX3-2.p2	AK042641|Syt15|319508|synaptotagmin XV	NM_176931|Syt15|319508|synaptotagmin XV	NM_181529|Syt15|319508|synaptotagmin XV	AK054180|Syt15|319508|synaptotagmin XV	BC139314|Syt15|319508|synaptotagmin XV	BC139313|Syt15|319508|synaptotagmin XV
mm9_v1_chr8_+_87621368_87621429	0.00151985	NKX3-2.p2	AK211157|Man2b1|17159|mannosidase 2, alpha B1
mm9_v1_chr6_-_146450399_146450533	0.00150004	NKX3-2.p2	AB012393|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	GU980658|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	AB182288|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	AB182290|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	NM_010586|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	NM_019923|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2
mm9_v1_chr6_-_86798929_86799146	0.00148483	NKX3-2.p2	BC096561|2610306M01Rik|67170|RIKEN cDNA 2610306M01 gene	BC058130|2610306M01Rik|67170|RIKEN cDNA 2610306M01 gene
mm9_v1_chr7_+_6367885_6367885	0.00145963	NKX3-2.p2	AK046418|Gm16532|100042450|predicted gene, 16532	NM_001134752|Gm16532|100042450|predicted gene, 16532
mm9_v1_chr1_-_99873641_99873694	0.00145168	NKX3-2.p2	AK049423|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr17_-_26227104_26227112	0.00143964	NKX3-2.p2	AF155575|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal	NM_011933|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
mm9_v1_chr4_+_148960604_148960830	0.00141759	NKX3-2.p2	BC053843|Clstn1|65945|calsyntenin 1	AJ289016|Clstn1|65945|calsyntenin 1	NM_023051|Clstn1|65945|calsyntenin 1
mm9_v1_chr11_+_98273797_98273840	0.00138136	NKX3-2.p2	NM_001003817|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK142296|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	BC046811|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	BC053078|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK129487|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm9_v1_chr7_-_123477620_123477703	0.00137956	NKX3-2.p2	BC085269|Rps13|68052|ribosomal protein S13	BC090397|Rps13|68052|ribosomal protein S13	BC106137|Rps13|68052|ribosomal protein S13	AK018703|Rps13|68052|ribosomal protein S13	AK076060|Rps13|68052|ribosomal protein S13	BC011192|Rps13|68052|ribosomal protein S13	AK012479|Rps13|68052|ribosomal protein S13	AK151043|Rps13|68052|ribosomal protein S13	AK166691|Rps13|68052|ribosomal protein S13	BC125602|Rps13|68052|ribosomal protein S13	BC125604|Rps13|68052|ribosomal protein S13	AK151671|Rps13|68052|ribosomal protein S13	AK161798|Rps13|68052|ribosomal protein S13	AK088237|Rps13|68052|ribosomal protein S13	NM_026533|Rps13|68052|ribosomal protein S13
mm9_v1_chr6_-_72849701_72849794	0.00137027	NKX3-2.p2	AK142436|Kcmf1|74287|potassium channel modulatory factor 1	BC043330|Kcmf1|74287|potassium channel modulatory factor 1	BC029325|Kcmf1|74287|potassium channel modulatory factor 1
mm9_v1_chr9_-_114842953_114842992	0.00136803	NKX3-2.p2	AK166662|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like	BC037729|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like	AK145475|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like
mm9_v1_chr14_+_32955207_32955211	0.00135645	NKX3-2.p2	NM_020597|Msmb|17695|beta-microseminoprotein
mm9_v1_chr2_-_104857155_104857253	0.00133907	NKX3-2.p2	BC116787|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	BC116789|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	AK077480|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	BC005598|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	BC103795|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	NM_145380|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	AK168066|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	AK084738|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M	AK146222|Eif3m|98221|eukaryotic translation initiation factor 3, subunit M
mm9_v1_chr5_-_139060952_139060970	0.00132258	NKX3-2.p2	AB024005|Zfp68|24135|zinc finger protein 68	BC018171|Zfp68|24135|zinc finger protein 68	AK013868|Zfp68|24135|zinc finger protein 68	NM_001044747|Zfp68|24135|zinc finger protein 68	NM_001163797|Zfp68|24135|zinc finger protein 68	NM_013844|Zfp68|24135|zinc finger protein 68
mm9_v1_chr11_-_74991244_74991377	0.00131886	NKX3-2.p2	AK206282|Ovca2|246257|candidate tumor suppressor in ovarian cancer 2
mm9_v1_chr8_-_35040236_35040273	0.00131288	NKX3-2.p2	AF148511|Rbpms|19663|RNA binding protein gene with multiple splicing	AK012265|Rbpms|19663|RNA binding protein gene with multiple splicing	AK012586|Rbpms|19663|RNA binding protein gene with multiple splicing
mm9_v1_chr14_-_56290697_56290758	0.00131101	NKX3-2.p2	D10918|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK147080|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	BC004625|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK146732|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	NM_008683|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8
mm9_v1_chr16_-_8672226_8672229	0.00130333	NKX3-2.p2	AK150245|Carhsp1|52502|calcium regulated heat stable protein 1	BC086754|Carhsp1|52502|calcium regulated heat stable protein 1
mm9_v1_chr12_+_111685371_111685434	0.00128676	NKX3-2.p2	NM_001135001|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr8_+_72758086_72758131	0.00127688	NKX3-2.p2	AK042293|Sugp2|234373|SURP and G patch domain containing 2	NM_001168290|Sugp2|234373|SURP and G patch domain containing 2	NM_172755|Sugp2|234373|SURP and G patch domain containing 2	AF518875|Sugp2|234373|SURP and G patch domain containing 2
mm9_v1_chr18_+_57628139_57628180	0.0012465	NKX3-2.p2	NM_001134697|Ctxn3|629147|cortexin 3	AK042789|Ctxn3|629147|cortexin 3
mm9_v1_chr12_-_70994089_70994191	0.00124418	NKX3-2.p2	BC048173|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK045031|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK053775|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	NM_201519|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr4_+_111392586_111392619	0.00123921	NKX3-2.p2	AK051574|Spata6|67946|spermatogenesis associated 6	NM_026470|Spata6|67946|spermatogenesis associated 6
mm9_v1_chr11_-_94410463_94410520	0.00122783	NKX3-2.p2	BC139274|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC139276|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC145594|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK148401|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK046706|Rsad1|237926|radical S-adenosyl methionine domain containing 1	NM_001013381|Rsad1|237926|radical S-adenosyl methionine domain containing 1
mm9_v1_chr9_+_26807281_26807337	0.00122168	NKX3-2.p2	AK021335|Thyn1|77862|thymocyte nuclear protein 1	AK077639|Thyn1|77862|thymocyte nuclear protein 1	BC016594|Thyn1|77862|thymocyte nuclear protein 1	AB080370|Thyn1|77862|thymocyte nuclear protein 1
mm9_v1_chr1_+_36569412_36569489	0.00117815	NKX3-2.p2	BC108417|Cnnm3|94218|cyclin M3
mm9_v1_chr17_+_24625709_24625729	0.00117342	NKX3-2.p2	NM_027937|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr8_-_95572090_95572178	0.00115423	NKX3-2.p2	BC089371|Ces1a|244595|carboxylesterase 1A	NM_001013764|Ces1a|244595|carboxylesterase 1A
mm9_v1_chr13_+_105019043_105019047	0.00109566	NKX3-2.p2	AK033117|Cenpk|60411|centromere protein K
mm9_v1_chr18_+_35776026_35776084	0.00107142	NKX3-2.p2	AK012839|Paip2|67869|polyadenylate-binding protein-interacting protein 2
mm9_v1_chr3_-_138738059_138738141	0.00105113	NKX3-2.p2	AK164159|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK166315|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK154852|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK155793|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK160989|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK052125|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1
mm9_v1_chr6_+_17256369_17256377	0.00104935	NKX3-2.p2	AB029929|Cav1|12389|caveolin 1, caveolae protein	NM_007616|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr2_-_152777135_152777317	0.00104044	NKX3-2.p2	BC116841|Dusp15|252864|dual specificity phosphatase-like 15	BC116843|Dusp15|252864|dual specificity phosphatase-like 15	BC144711|Dusp15|252864|dual specificity phosphatase-like 15	AF357887|Dusp15|252864|dual specificity phosphatase-like 15	NM_145744|Dusp15|252864|dual specificity phosphatase-like 15	NM_001159376|Dusp15|252864|dual specificity phosphatase-like 15
mm9_v1_chr6_-_85463535_85463588	0.00101911	NKX3-2.p2	NM_020596|Egr4|13656|early growth response 4	AK141637|Egr4|13656|early growth response 4
mm9_v1_chr8_-_108535317_108535385	0.000990547	NKX3-2.p2	AK010396|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	AK163480|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC058568|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120556|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120582|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	NM_028038|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
mm9_v1_chr9_-_53344748_53344787	0.000987042	NKX3-2.p2	AK031702|Atm|11920|ataxia telangiectasia mutated homolog (human)	NM_007499|Atm|11920|ataxia telangiectasia mutated homolog (human)	AK139863|Atm|11920|ataxia telangiectasia mutated homolog (human)
mm9_v1_chr12_+_8680904_8680950	0.00098293	NKX3-2.p2	AK134185|Pum2|80913|pumilio 2 (Drosophila)	NM_001160221|Pum2|80913|pumilio 2 (Drosophila)	NM_001160222|Pum2|80913|pumilio 2 (Drosophila)	AK163964|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr14_-_73762324_73762328	0.000982311	NKX3-2.p2	AK010248|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr7_+_31278675_31278685	0.000968946	NKX3-2.p2	AK011039|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK050141|Prodh2|56189|proline dehydrogenase (oxidase) 2	NM_019546|Prodh2|56189|proline dehydrogenase (oxidase) 2	U80019|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK011020|Prodh2|56189|proline dehydrogenase (oxidase) 2
mm9_v1_chr8_+_87380871_87380960	0.000957104	NKX3-2.p2	NM_025648|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK154629|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK163038|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK016506|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK002577|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK031697|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK044637|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	BC006862|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	BC013533|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK171872|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	AK084031|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit	CT010350|Farsa|66590|phenylalanyl-tRNA synthetase, alpha subunit
mm9_v1_chr3_-_94690425_94690538	0.000938986	NKX3-2.p2	AK194462|Psmb4|19172|proteasome (prosome, macropain) subunit, beta type 4	M74556|Psmb4|19172|proteasome (prosome, macropain) subunit, beta type 4
mm9_v1_chr5_-_139606339_139606437	0.000933326	NKX3-2.p2	AK158994|Prkar1b|19085|protein kinase, cAMP dependent regulatory, type I beta
mm9_v1_chr7_-_19751441_19751475	0.000932166	NKX3-2.p2	AK050472|Gipr|381853|gastric inhibitory polypeptide receptor	AK146552|Gipr|381853|gastric inhibitory polypeptide receptor	NM_001080815|Gipr|381853|gastric inhibitory polypeptide receptor
mm9_v1_chr9_-_20935610_20935730	0.000931015	NKX3-2.p2	AK134154|Tyk2|54721|tyrosine kinase 2	AK155923|Tyk2|54721|tyrosine kinase 2	AK171609|Tyk2|54721|tyrosine kinase 2	AF173032|Tyk2|54721|tyrosine kinase 2	AK170107|Tyk2|54721|tyrosine kinase 2	AK170940|Tyk2|54721|tyrosine kinase 2	AK154438|Tyk2|54721|tyrosine kinase 2	AK159303|Tyk2|54721|tyrosine kinase 2	AK165483|Tyk2|54721|tyrosine kinase 2	AK167726|Tyk2|54721|tyrosine kinase 2	NM_018793|Tyk2|54721|tyrosine kinase 2
mm9_v1_chr3_-_10331334_10331440	0.000930202	NKX3-2.p2	BC055722|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AF042730|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160467|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK083238|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK145472|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK011770|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160203|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK165977|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	BC049080|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK078406|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK152774|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK147778|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK153457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK168457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	NM_018864|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1
mm9_v1_chr1_-_163718415_163718625	0.000923809	NKX3-2.p2	AF288572|Fasl|14103|Fas ligand (TNF superfamily, member 6)	DQ846747|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U58995|Fasl|14103|Fas ligand (TNF superfamily, member 6)	S76752|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AF119335|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U06948|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U10984|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK141268|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK040139|Fasl|14103|Fas ligand (TNF superfamily, member 6)	NM_010177|Fasl|14103|Fas ligand (TNF superfamily, member 6)
mm9_v1_chr2_-_17653057_17653112	0.000868353	NKX3-2.p2	AK077332|Nebl|74103|nebulette
mm9_v1_chr15_-_96529121_96529237	0.000862451	NKX3-2.p2	AK164568|Slc38a2|67760|solute carrier family 38, member 2	AK018767|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr18_-_73863381_73863446	0.00083916	NKX3-2.p2	BC046584|Smad4|17128|MAD homolog 4 (Drosophila)	NM_008540|Smad4|17128|MAD homolog 4 (Drosophila)
mm9_v1_chr16_+_90221044_90221098	0.000810741	NKX3-2.p2	BC002066|Sod1|20655|superoxide dismutase 1, soluble	AK077284|Sod1|20655|superoxide dismutase 1, soluble	AK020624|Sod1|20655|superoxide dismutase 1, soluble	M35725|Sod1|20655|superoxide dismutase 1, soluble	X06683|Sod1|20655|superoxide dismutase 1, soluble
mm9_v1_chr15_-_66801093_66801186	0.000808509	NKX3-2.p2	BC141246|Ndrg1|17988|N-myc downstream regulated gene 1	BC171968|Ndrg1|17988|N-myc downstream regulated gene 1	BC015282|Ndrg1|17988|N-myc downstream regulated gene 1	U52073|Ndrg1|17988|N-myc downstream regulated gene 1	BC071235|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr12_+_85758140_85758149	0.000784706	NKX3-2.p2	AK009420|Rnf113a2|66381|ring finger protein 113A2	NM_025525|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr1_-_80617391_80617399	0.000762599	NKX3-2.p2	AK089619|F830005D05Rik|320797|RIKEN cDNA F830005D05 gene	AK089678|F830005D05Rik|320797|RIKEN cDNA F830005D05 gene
mm9_v1_chr6_-_35489875_35489887	0.000753948	NKX3-2.p2	NM_008098|Mtpn|14489|myotrophin
mm9_v1_chr8_-_71259021_71259065	0.000730558	NKX3-2.p2	BC089162|Csgalnact1|234356|chondroitin sulfate N-acetylgalactosaminyltransferase 1	NM_172753|Csgalnact1|234356|chondroitin sulfate N-acetylgalactosaminyltransferase 1
mm9_v1_chr7_-_5013650_5013679	0.000682038	NKX3-2.p2	AK148389|Ccdc106|232821|coiled-coil domain containing 106
mm9_v1_chr11_-_80966253_80966404	0.000667755	NKX3-2.p2	BC138530|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	BC138529|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	BC038551|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	NM_007384|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	Y14634|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)
mm9_v1_chr10_+_11063201_11063297	0.000659553	NKX3-2.p2	AF124044|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	AK155519|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	NM_010146|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	AK041609|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha
mm9_v1_chr9_-_50425561_50425568	0.000655041	NKX3-2.p2	NM_001134902|AU019823|270156|expressed sequence AU019823	NM_212449|AU019823|270156|expressed sequence AU019823
mm9_v1_chr11_-_51670897_51671154	0.000648635	NKX3-2.p2	AK147453|Phf15|76901|PHD finger protein 15	AK129097|Phf15|76901|PHD finger protein 15	NM_199299|Phf15|76901|PHD finger protein 15	AK004823|Phf15|76901|PHD finger protein 15
mm9_v1_chr8_+_125935470_125935482	0.000629519	NKX3-2.p2	AF312873|Tubb3|22152|tubulin, beta 3
mm9_v1_chr3_+_116564564_116564609	0.000629518	NKX3-2.p2	NM_009146|Frrs1|20321|ferric-chelate reductase 1	AK075573|Frrs1|20321|ferric-chelate reductase 1	AK144933|Frrs1|20321|ferric-chelate reductase 1	AK162693|Frrs1|20321|ferric-chelate reductase 1	D50464|Frrs1|20321|ferric-chelate reductase 1
mm9_v1_chr15_-_76369126_76369196	0.000628828	NKX3-2.p2	BC044784|Fbxl6|30840|F-box and leucine-rich repeat protein 6	BC054377|Fbxl6|30840|F-box and leucine-rich repeat protein 6	BC011485|Fbxl6|30840|F-box and leucine-rich repeat protein 6	BC026818|Fbxl6|30840|F-box and leucine-rich repeat protein 6	AB041571|Fbxl6|30840|F-box and leucine-rich repeat protein 6	AF176522|Fbxl6|30840|F-box and leucine-rich repeat protein 6	AK052585|Fbxl6|30840|F-box and leucine-rich repeat protein 6	AK040458|Fbxl6|30840|F-box and leucine-rich repeat protein 6	NM_013909|Fbxl6|30840|F-box and leucine-rich repeat protein 6
mm9_v1_chr8_-_98012679_98012750	0.000596187	NKX3-2.p2	AK076042|Csnk2a2|13000|casein kinase 2, alpha prime polypeptide	AJ001420|Csnk2a2|13000|casein kinase 2, alpha prime polypeptide	BC047143|Csnk2a2|13000|casein kinase 2, alpha prime polypeptide	NM_009974|Csnk2a2|13000|casein kinase 2, alpha prime polypeptide	AK002927|Csnk2a2|13000|casein kinase 2, alpha prime polypeptide
mm9_v1_chr5_-_38550248_38550345	0.000591621	NKX3-2.p2	AF531172|Nsg1|18196|neuron specific gene family member 1
mm9_v1_chr19_+_34658016_34658052	0.000589035	NKX3-2.p2	AK153226|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	NM_010501|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK077459|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK151032|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC089563|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	L32974|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC003804|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3
mm9_v1_chr9_-_63869857_63869865	0.000580224	NKX3-2.p2	AK046602|Smad6|17130|MAD homolog 6 (Drosophila)	NM_008542|Smad6|17130|MAD homolog 6 (Drosophila)
mm9_v1_chr13_+_46060591_46060621	0.000577065	NKX3-2.p2	AK017206|5033430I15Rik|76000|RIKEN cDNA 5033430I15 gene
mm9_v1_chr4_-_126540249_126540348	0.000573567	NKX3-2.p2	AK018207|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chrX_-_34731084_34731232	0.000559544	NKX3-2.p2	CT010398|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	AK007840|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	BC024364|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1	NM_019443|Ndufa1|54405|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1
mm9_v1_chr19_-_46380070_46380120	0.000551785	NKX3-2.p2	AK156394|4833438C02Rik|107243|RIKEN cDNA 4833438C02 gene	AK029443|4833438C02Rik|107243|RIKEN cDNA 4833438C02 gene
mm9_v1_chr4_-_116323979_116324063	0.000540555	NKX3-2.p2	AK128906|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK186333|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK192030|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK210646|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK219186|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK009462|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC003850|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr4_-_58219368_58219467	0.000533415	NKX3-2.p2	AK052699|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AF206329|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	NM_022814|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr5_-_31593411_31593494	0.000519165	NKX3-2.p2	AK144190|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	AY339616|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	BC042583|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	AK043642|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	BC066096|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)	NM_026298|Ift172|67661|intraflagellar transport 172 homolog (Chlamydomonas)
mm9_v1_chr7_+_25862223_25862340	0.000471716	NKX3-2.p2	AK143997|Zfp574|232976|zinc finger protein 574	NM_001168506|Zfp574|232976|zinc finger protein 574	NM_175477|Zfp574|232976|zinc finger protein 574	AK053744|Zfp574|232976|zinc finger protein 574	BC059044|Zfp574|232976|zinc finger protein 574	AK042074|Zfp574|232976|zinc finger protein 574	AK170243|Zfp574|232976|zinc finger protein 574	BC021833|Zfp574|232976|zinc finger protein 574	BC094354|Zfp574|232976|zinc finger protein 574
mm9_v1_chr8_-_92872139_92872206	0.000470736	NKX3-2.p2	AK082602|Tox3|244579|TOX high mobility group box family member 3	NM_172913|Tox3|244579|TOX high mobility group box family member 3
mm9_v1_chr3_-_89083562_89083576	0.000468801	NKX3-2.p2	AK009144|Efna1|13636|ephrin A1	NM_010107|Efna1|13636|ephrin A1
mm9_v1_chr19_+_10652212_10652359	0.000463104	NKX3-2.p2	BC065078|Cybasc3|225912|cytochrome b, ascorbate dependent 3	NM_201351|Cybasc3|225912|cytochrome b, ascorbate dependent 3
mm9_v1_chr14_-_47006944_47006954	0.000462904	NKX3-2.p2	BC052846|Bmp4|12159|bone morphogenetic protein 4
mm9_v1_chr4_+_147932563_147932565	0.000440743	NKX3-2.p2	AK168700|Exosc10|50912|exosome component 10
mm9_v1_chr8_-_127472730_127472856	0.000434177	NKX3-2.p2	AJ310546|Egln1|112405|EGL nine homolog 1 (C. elegans)
mm9_v1_chr10_-_117282901_117283016	0.00040157	NKX3-2.p2	BC147390|Rap1b|215449|RAS related protein 1b	BC147391|Rap1b|215449|RAS related protein 1b	AK178034|Rap1b|215449|RAS related protein 1b	AK196093|Rap1b|215449|RAS related protein 1b	AK199293|Rap1b|215449|RAS related protein 1b	AK218552|Rap1b|215449|RAS related protein 1b	BC033382|Rap1b|215449|RAS related protein 1b	BC094066|Rap1b|215449|RAS related protein 1b	AK167548|Rap1b|215449|RAS related protein 1b	AK153870|Rap1b|215449|RAS related protein 1b	AK143910|Rap1b|215449|RAS related protein 1b
mm9_v1_chr3_-_27052794_27052801	0.000367549	NKX3-2.p2	NM_001177626|Ect2|13605|ect2 oncogene
mm9_v1_chr15_+_76175034_76175081	0.000341306	NKX3-2.p2	AK186904|Cyc1|66445|cytochrome c-1
mm9_v1_chr11_-_43649708_43649999	0.000325267	NKX3-2.p2	BC138653|Adra1b|11548|adrenergic receptor, alpha 1b	BC138654|Adra1b|11548|adrenergic receptor, alpha 1b	AK043877|Adra1b|11548|adrenergic receptor, alpha 1b	NM_007416|Adra1b|11548|adrenergic receptor, alpha 1b	AK139448|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr9_-_65972570_65972698	0.000290574	NKX3-2.p2	AK155746|Snx1|56440|sorting nexin 1	AK167993|Snx1|56440|sorting nexin 1	BC066189|Snx1|56440|sorting nexin 1	AK154079|Snx1|56440|sorting nexin 1	AK149850|Snx1|56440|sorting nexin 1	AB019214|Snx1|56440|sorting nexin 1	AK167177|Snx1|56440|sorting nexin 1	BC066044|Snx1|56440|sorting nexin 1	AK161241|Snx1|56440|sorting nexin 1	AK168742|Snx1|56440|sorting nexin 1	AF154120|Snx1|56440|sorting nexin 1	NM_019727|Snx1|56440|sorting nexin 1
mm9_v1_chr3_+_89263237_89263263	0.000289649	NKX3-2.p2	AK003607|Pmvk|68603|phosphomevalonate kinase
mm9_v1_chr9_-_86465373_86465470	0.000271409	NKX3-2.p2	BC138700|Pgm3|109785|phosphoglucomutase 3	AK051706|Pgm3|109785|phosphoglucomutase 3	AK032776|Pgm3|109785|phosphoglucomutase 3	AK049337|Pgm3|109785|phosphoglucomutase 3	AK169141|Pgm3|109785|phosphoglucomutase 3	AK169082|Pgm3|109785|phosphoglucomutase 3	AK169787|Pgm3|109785|phosphoglucomutase 3	AK165513|Pgm3|109785|phosphoglucomutase 3	AK013402|Pgm3|109785|phosphoglucomutase 3	AK036561|Pgm3|109785|phosphoglucomutase 3	AK049758|Pgm3|109785|phosphoglucomutase 3	AK028066|Pgm3|109785|phosphoglucomutase 3	AK160913|Pgm3|109785|phosphoglucomutase 3	AK043547|Pgm3|109785|phosphoglucomutase 3	NM_001163746|Pgm3|109785|phosphoglucomutase 3	NM_028352|Pgm3|109785|phosphoglucomutase 3
mm9_v1_chrX_+_102318792_102318798	0.000269243	NKX3-2.p2	AK209904|Magee1|107528|melanoma antigen, family E, 1
mm9_v1_chr7_+_28232980_28232996	0.000269051	NKX3-2.p2	BC027279|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))	NM_144923|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))
mm9_v1_chr5_-_34979701_34979744	0.000260351	NKX3-2.p2	AK152438|Mfsd10|68294|major facilitator superfamily domain containing 10
mm9_v1_chr14_-_27783615_27783757	0.000249975	NKX3-2.p2	AK030445|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK045438|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK088080|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AY113705|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK033566|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK146356|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK049307|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	NM_145221|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	BC063751|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm9_v1_chr2_+_181054406_181054528	0.000242617	NKX3-2.p2	NM_001001882|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166665|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166666|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166667|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166668|Rtel1|269400|regulator of telomere elongation helicase 1	AK142225|Rtel1|269400|regulator of telomere elongation helicase 1	BC057352|Rtel1|269400|regulator of telomere elongation helicase 1	AK145145|Rtel1|269400|regulator of telomere elongation helicase 1	AK173097|Rtel1|269400|regulator of telomere elongation helicase 1	AY481619|Rtel1|269400|regulator of telomere elongation helicase 1	AY481620|Rtel1|269400|regulator of telomere elongation helicase 1	AY481621|Rtel1|269400|regulator of telomere elongation helicase 1	AY481622|Rtel1|269400|regulator of telomere elongation helicase 1	AY481623|Rtel1|269400|regulator of telomere elongation helicase 1	BC105578|Rtel1|269400|regulator of telomere elongation helicase 1
mm9_v1_chr2_-_13466273_13466302	0.000235312	NKX3-2.p2	AF045889|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AF012129|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AK050403|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AK029136|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	BC087892|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	NM_010067|Trdmt1|13434|tRNA aspartic acid methyltransferase 1
mm9_v1_chr16_+_31948631_31948724	0.000230088	NKX3-2.p2	NM_026554|Ncbp2|68092|nuclear cap binding protein subunit 2	AK008980|Ncbp2|68092|nuclear cap binding protein subunit 2	AK078181|Ncbp2|68092|nuclear cap binding protein subunit 2	AK147027|Ncbp2|68092|nuclear cap binding protein subunit 2	AK012659|Ncbp2|68092|nuclear cap binding protein subunit 2	AK014016|Ncbp2|68092|nuclear cap binding protein subunit 2	AK135597|Ncbp2|68092|nuclear cap binding protein subunit 2	AK077841|Ncbp2|68092|nuclear cap binding protein subunit 2	BC118926|Ncbp2|68092|nuclear cap binding protein subunit 2
mm9_v1_chr2_-_164682380_164682513	0.000229775	NKX3-2.p2	CT010317|Pltp|18830|phospholipid transfer protein	U28960|Pltp|18830|phospholipid transfer protein
mm9_v1_chr11_-_66339627_66339627	0.000217415	NKX3-2.p2	AK147504|Shisa6|380702|shisa homolog 6 (Xenopus laevis)	NM_001034874|Shisa6|380702|shisa homolog 6 (Xenopus laevis)
mm9_v1_chr5_-_23536439_23536474	0.00021029	NKX3-2.p2	BC056381|Fam126a|84652|family with sequence similarity 126, member A
mm9_v1_chr2_-_33310186_33310278	0.000191769	NKX3-2.p2	
mm9_v1_chr6_-_122287014_122287032	0.000189404	NKX3-2.p2	U63386|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_001042623|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_007905|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chr7_-_149069070_149069207	0.000188423	NKX3-2.p2	AK049198|Tollip|54473|toll interacting protein
mm9_v1_chr16_+_5884885_5884885	0.000186688	NKX3-2.p2	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr7_+_150293158_150293455	0.000165373	NKX3-2.p2	BC045142|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	NM_008434|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AK154244|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	BC055304|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AY331142|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	U70068|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AB079603|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1
mm9_v1_chr6_+_70794501_70794578	0.000150943	NKX3-2.p2	BC054809|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	NM_010121|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	AF076681|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	AK010397|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	AK046355|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3
mm9_v1_chr9_-_62659364_62659454	0.000147848	NKX3-2.p2	AB022863|Fem1b|14155|feminization 1 homolog b (C. elegans)	BC068236|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK149329|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK032338|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK132692|Fem1b|14155|feminization 1 homolog b (C. elegans)	NM_010193|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr4_+_132686585_132686596	0.000146976	NKX3-2.p2	AK183500|Wasf2|242687|WAS protein family, member 2
mm9_v1_chr11_+_80022587_80022605	0.000146811	NKX3-2.p2	AK169811|Rhot1|59040|ras homolog gene family, member T1	AK021245|Rhot1|59040|ras homolog gene family, member T1	AK019059|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr2_-_154718506_154718641	0.000145489	NKX3-2.p2	BC113766|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	BC003848|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK019156|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK143553|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK166862|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK145401|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK012338|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	BC100539|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK076056|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK011503|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK042004|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK166866|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK145434|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	NM_026030|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)
mm9_v1_chr8_+_13105702_13105757	0.000138776	NKX3-2.p2	NM_146207|Cul4a|99375|cullin 4A	AK144802|Cul4a|99375|cullin 4A	AK166251|Cul4a|99375|cullin 4A	AK170722|Cul4a|99375|cullin 4A	AK168215|Cul4a|99375|cullin 4A	AK084008|Cul4a|99375|cullin 4A	BC010211|Cul4a|99375|cullin 4A	AK150237|Cul4a|99375|cullin 4A
mm9_v1_chr18_+_76219111_76219147	0.000136484	NKX3-2.p2	BC018187|Zbtb7c|207259|zinc finger and BTB domain containing 7C	AK156372|Zbtb7c|207259|zinc finger and BTB domain containing 7C
mm9_v1_chr17_-_26005680_26005704	0.000133884	NKX3-2.p2	AK020614|Fam195a|68241|family with sequence similarity 195, member A	AK003564|Fam195a|68241|family with sequence similarity 195, member A	NM_026633|Fam195a|68241|family with sequence similarity 195, member A
mm9_v1_chr17_+_34742803_34742908	0.000125649	NKX3-2.p2	NM_001163379|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	AB005623|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	AK086281|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm9_v1_chr14_+_55506625_55506792	0.000117699	NKX3-2.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr11_-_101163456_101163604	0.000116219	NKX3-2.p2	AK189474|Becn1|56208|beclin 1, autophagy related	AK178460|Becn1|56208|beclin 1, autophagy related	AK151531|Becn1|56208|beclin 1, autophagy related	BC005770|Becn1|56208|beclin 1, autophagy related	BC027738|Becn1|56208|beclin 1, autophagy related	AK028851|Becn1|56208|beclin 1, autophagy related	AK083800|Becn1|56208|beclin 1, autophagy related	AK031501|Becn1|56208|beclin 1, autophagy related	AK032176|Becn1|56208|beclin 1, autophagy related	AK050329|Becn1|56208|beclin 1, autophagy related	NM_019584|Becn1|56208|beclin 1, autophagy related	AK077392|Becn1|56208|beclin 1, autophagy related
mm9_v1_chr9_-_57493393_57493475	8.02235e-05	NKX3-2.p2	AK136876|Csk|12988|c-src tyrosine kinase
mm9_v1_chr6_-_28211910_28211939	6.76537e-05	NKX3-2.p2	BC066073|Zfp800|627049|zinc finger protein 800
mm9_v1_chr3_+_87723411_87723427	6.41735e-05	NKX3-2.p2	AK167623|Mrpl24|67707|mitochondrial ribosomal protein L24
mm9_v1_chr9_+_65756816_65756864	6.21747e-05	NKX3-2.p2	AK090262|Csnk1g1|214897|casein kinase 1, gamma 1	NM_173185|Csnk1g1|214897|casein kinase 1, gamma 1	AK050473|Csnk1g1|214897|casein kinase 1, gamma 1	AK149310|Csnk1g1|214897|casein kinase 1, gamma 1
mm9_v1_chr16_+_16213434_16213437	6.09766e-05	NKX3-2.p2	AK004650|Pkp2|67451|plakophilin 2	AK004731|Pkp2|67451|plakophilin 2	AK049481|Pkp2|67451|plakophilin 2	AK162000|Pkp2|67451|plakophilin 2	AK167660|Pkp2|67451|plakophilin 2	BC138252|Pkp2|67451|plakophilin 2	BC138253|Pkp2|67451|plakophilin 2	NM_026163|Pkp2|67451|plakophilin 2
mm9_v1_chr10_+_85763287_85763288	4.39815e-05	NKX3-2.p2	L27424|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr4_+_125773896_125773946	2.8921e-05	NKX3-2.p2	NM_001163266|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	NM_138721|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10
mm9_v1_chr1_-_42749940_42749978	1.44708e-05	NKX3-2.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr3_+_36374858_36374870	1.42598e-05	NKX3-2.p2	AK007933|1810062G17Rik|72282|RIKEN cDNA 1810062G17 gene
mm9_v1_chr2_+_25413360_25413471	1.00996e-05	NKX3-2.p2	AK003557|Edf1|59022|endothelial differentiation-related factor 1	AK002345|Edf1|59022|endothelial differentiation-related factor 1	AK010191|Edf1|59022|endothelial differentiation-related factor 1	AB030185|Edf1|59022|endothelial differentiation-related factor 1	NM_021519|Edf1|59022|endothelial differentiation-related factor 1	BC023472|Edf1|59022|endothelial differentiation-related factor 1	AJ309569|Edf1|59022|endothelial differentiation-related factor 1
mm9_v1_chr15_+_99223622_99223695	5.35986e-06	NKX3-2.p2	NM_001171035|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chrX_+_155852641_155852717	2.267e-06	NKX3-2.p2	AK013466|Mtap7d2|78283|MAP7 domain containing 2
