mm9_v1_chr17_+_80706746_80706746	8.96353	CRX.p2	NM_001145452|Arhgef33|381112|Rho guanine nucleotide exchange factor (GEF) 33
mm9_v1_chr6_-_60778740_60778989	4.78048	CRX.p2	BC046764|Snca|20617|synuclein, alpha	AK156316|Snca|20617|synuclein, alpha	AK014472|Snca|20617|synuclein, alpha	AF033261|Snca|20617|synuclein, alpha	NM_001042451|Snca|20617|synuclein, alpha
mm9_v1_chr5_-_104542598_104542621	4.45646	CRX.p2	AK158725|Sparcl1|13602|SPARC-like 1
mm9_v1_chr2_-_7002287_7002310	4.41785	CRX.p2	AK137292|Celf2|14007|CUGBP, Elav-like family member 2	AK164914|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr10_+_99478457_99478639	3.67515	CRX.p2	AK018777|Kitl|17311|kit ligand	NM_013598|Kitl|17311|kit ligand	U44725|Kitl|17311|kit ligand	AK134301|Kitl|17311|kit ligand	AK041961|Kitl|17311|kit ligand	AK165233|Kitl|17311|kit ligand	BC011322|Kitl|17311|kit ligand	M57647|Kitl|17311|kit ligand	S40364|Kitl|17311|kit ligand	S40534|Kitl|17311|kit ligand	S40536|Kitl|17311|kit ligand	M64262|Kitl|17311|kit ligand	X95379|Kitl|17311|kit ligand	X95380|Kitl|17311|kit ligand	X95381|Kitl|17311|kit ligand	X99322|Kitl|17311|kit ligand	Y10287|Kitl|17311|kit ligand	M59915|Kitl|17311|kit ligand
mm9_v1_chr2_-_7002344_7002370	3.60489	CRX.p2	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr11_+_87391881_87392001	3.52042	CRX.p2	AK133933|Sept4|18952|septin 4	AK137299|Sept4|18952|septin 4	AK039859|Sept4|18952|septin 4
mm9_v1_chrM_+_3913_4410	3.29079	CRX.p2	
mm9_v1_chr11_+_94871643_94871672	3.21909	CRX.p2	AK044765|Samd14|217125|sterile alpha motif domain containing 14	BC034054|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr16_-_10313963_10313988	3.05947	CRX.p2	AK161166|Emp2|13731|epithelial membrane protein 2	BC041670|Emp2|13731|epithelial membrane protein 2	AF346627|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr1_+_43787692_43787692	3.05287	CRX.p2	AK018770|1500015O10Rik|78896|RIKEN cDNA 1500015O10 gene
mm9_v1_chr11_-_79317471_79317554	2.91667	CRX.p2	BC024757|Omg|18377|oligodendrocyte myelin glycoprotein
mm9_v1_chr19_+_4100914_4101127	2.71062	CRX.p2	BC048150|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	BC044893|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1
mm9_v1_chr6_-_59376283_59376287	2.68795	CRX.p2	AK050148|Gprin3|243385|GPRIN family member 3	NM_183183|Gprin3|243385|GPRIN family member 3	AK173336|Gprin3|243385|GPRIN family member 3
mm9_v1_chr6_+_108163089_108163111	2.66532	CRX.p2	AK047719|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	AK137477|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	NM_010585|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	X15373|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1
mm9_v1_chr8_+_26830480_26830683	2.48491	CRX.p2	NM_028000|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC023111|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	AK144593|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC089556|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC062173|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	AK009455|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC099489|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B
mm9_v1_chr19_-_17912073_17912162	2.45201	CRX.p2	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr13_+_20564928_20564972	2.30597	CRX.p2	AK053306|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	AK032085|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	BC024727|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	NM_198093|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)
mm9_v1_chr10_+_87321789_87322010	2.3055	CRX.p2	NM_001111275|Igf1|16000|insulin-like growth factor 1	NM_010512|Igf1|16000|insulin-like growth factor 1	AK050118|Igf1|16000|insulin-like growth factor 1	AK081019|Igf1|16000|insulin-like growth factor 1	AK165471|Igf1|16000|insulin-like growth factor 1	AY878192|Igf1|16000|insulin-like growth factor 1	AY878193|Igf1|16000|insulin-like growth factor 1	AK052033|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr7_-_147268395_147268472	2.27882	CRX.p2	AK002979|Caly|68566|calcyon neuron-specific vesicular protein	AK163466|Caly|68566|calcyon neuron-specific vesicular protein	AK003400|Caly|68566|calcyon neuron-specific vesicular protein	NM_001190385|Caly|68566|calcyon neuron-specific vesicular protein	NM_026769|Caly|68566|calcyon neuron-specific vesicular protein
mm9_v1_chr2_+_32442585_32442614	2.27155	CRX.p2	AJ007310|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK085730|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK144884|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK155956|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK159712|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK161559|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK007601|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
mm9_v1_chr11_-_94902584_94902717	2.26391	CRX.p2	AF267660|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	AK002647|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	BC021764|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	NM_133667|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2
mm9_v1_chr1_-_55283189_55283376	2.25158	CRX.p2	BC026871|Rftn2|74013|raftlin family member 2	AK014318|Rftn2|74013|raftlin family member 2
mm9_v1_chr7_+_53651811_53651938	2.2496	CRX.p2	NM_008421|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147476|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147682|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	NM_001112739|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr7_+_51640108_51640216	2.1458	CRX.p2	D45858|Syt3|20981|synaptotagmin III	BC051969|Syt3|20981|synaptotagmin III
mm9_v1_chr18_+_23656024_23656160	2.13516	CRX.p2	AK147359|Dtna|13527|dystrobrevin alpha	BC050765|Dtna|13527|dystrobrevin alpha	AK131649|Dtna|13527|dystrobrevin alpha	X95226|Dtna|13527|dystrobrevin alpha
mm9_v1_chr5_+_107926763_107926815	2.06049	CRX.p2	AK043587|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001007574|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK043720|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK164388|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK169666|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001168557|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene
mm9_v1_chr6_+_90500776_90500841	1.98851	CRX.p2	BC024055|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC028817|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC022112|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC030730|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	NM_027406|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1
mm9_v1_chr5_-_104542641_104542708	1.98594	CRX.p2	U64827|Sparcl1|13602|SPARC-like 1
mm9_v1_chr14_+_55555300_55555355	1.94674	CRX.p2	AK005168|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	AK013666|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	NM_026066|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	AY241867|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	BC049665|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	DQ115983|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5	AK005375|Cmtm5|67272|CKLF-like MARVEL transmembrane domain containing 5
mm9_v1_chr2_+_131776596_131776620	1.94342	CRX.p2	AK043023|Prnd|26434|prion protein dublet	AK161043|Prnd|26434|prion protein dublet	DQ832281|Prnd|26434|prion protein dublet	NM_001126338|Prnd|26434|prion protein dublet	NM_023043|Prnd|26434|prion protein dublet	AF192384|Prnd|26434|prion protein dublet	AF192385|Prnd|26434|prion protein dublet	AF165166|Prnd|26434|prion protein dublet	BC025140|Prnd|26434|prion protein dublet
mm9_v1_chr10_+_98725871_98725972	1.94301	CRX.p2	AK009131|Dusp6|67603|dual specificity phosphatase 6	AK159146|Dusp6|67603|dual specificity phosphatase 6	AK159900|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr3_+_151100845_151100914	1.92441	CRX.p2	NM_133222|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	AF385682|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	BC017134|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1
mm9_v1_chr6_-_53770406_53770488	1.894	CRX.p2	AK122338|Tril|66873|TLR4 interactor with leucine-rich repeats	AK033401|Tril|66873|TLR4 interactor with leucine-rich repeats	AK004681|Tril|66873|TLR4 interactor with leucine-rich repeats
mm9_v1_chr2_-_84265422_84265424	1.84937	CRX.p2	AK137210|Calcrl|54598|calcitonin receptor-like	NM_018782|Calcrl|54598|calcitonin receptor-like	AB015595|Calcrl|54598|calcitonin receptor-like
mm9_v1_chr2_+_138104219_138104260	1.80627	CRX.p2	AB093275|Btbd3|228662|BTB (POZ) domain containing 3	NM_145534|Btbd3|228662|BTB (POZ) domain containing 3	BC018174|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr16_-_10313924_10313944	1.8009	CRX.p2	AF083876|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr10_+_40349816_40349885	1.71554	CRX.p2	AK033375|Ddo|70503|D-aspartate oxidase	NM_027442|Ddo|70503|D-aspartate oxidase	AK019898|Ddo|70503|D-aspartate oxidase	AK085947|Ddo|70503|D-aspartate oxidase	AK165344|Ddo|70503|D-aspartate oxidase	AK017475|Ddo|70503|D-aspartate oxidase	AK161548|Ddo|70503|D-aspartate oxidase	BC027312|Ddo|70503|D-aspartate oxidase	BC006690|Ddo|70503|D-aspartate oxidase	AM180091|Ddo|70503|D-aspartate oxidase	AB274968|Ddo|70503|D-aspartate oxidase
mm9_v1_chr1_+_145487825_145487990	1.61459	CRX.p2	AK036141|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_020025|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK034371|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK083168|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK080106|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC046322|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm9_v1_chr17_+_46390828_46391138	1.59525	CRX.p2	AK134769|Gm88|224813|predicted gene 88	NM_001111142|Gm88|224813|predicted gene 88	BC147714|Gm88|224813|predicted gene 88	BC172136|Gm88|224813|predicted gene 88
mm9_v1_chr7_+_150238626_150238701	1.54268	CRX.p2	NM_133655|Cd81|12520|CD81 antigen	AK166521|Cd81|12520|CD81 antigen	AK170741|Cd81|12520|CD81 antigen	AK136370|Cd81|12520|CD81 antigen	BC011433|Cd81|12520|CD81 antigen
mm9_v1_chr10_+_115455342_115455485	1.51731	CRX.p2	AK051719|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	AK028054|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	NM_011217|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	D31898|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	BC119230|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	BC120547|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chrM_+_15355_15407	1.50084	CRX.p2	
mm9_v1_chr1_+_111880313_111880391	1.45446	CRX.p2	AK034096|Cdh7|241201|cadherin 7, type 2	NM_172853|Cdh7|241201|cadherin 7, type 2	AK137369|Cdh7|241201|cadherin 7, type 2
mm9_v1_chr9_-_114299732_114299829	1.44219	CRX.p2	BC049890|Crtap|56693|cartilage associated protein	AK047506|Crtap|56693|cartilage associated protein	AJ006469|Crtap|56693|cartilage associated protein	AK017797|Crtap|56693|cartilage associated protein	NM_019922|Crtap|56693|cartilage associated protein
mm9_v1_chr5_-_104542729_104542746	1.43553	CRX.p2	AK134608|Sparcl1|13602|SPARC-like 1
mm9_v1_chr8_-_109927080_109927165	1.43253	CRX.p2	U12961|Nqo1|18104|NAD(P)H dehydrogenase, quinone 1	BC004579|Nqo1|18104|NAD(P)H dehydrogenase, quinone 1	AK075568|Nqo1|18104|NAD(P)H dehydrogenase, quinone 1	NM_008706|Nqo1|18104|NAD(P)H dehydrogenase, quinone 1	S75951|Nqo1|18104|NAD(P)H dehydrogenase, quinone 1
mm9_v1_chr6_+_79968948_79969041	1.39495	CRX.p2	BC037216|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4	AK038656|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chr5_+_27588462_27588514	1.38767	CRX.p2	NM_001136060|Dpp6|13483|dipeptidylpeptidase 6	AK031903|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr10_+_126602182_126602286	1.3524	CRX.p2	AK144484|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC057199|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	NM_008080|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC019969|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chrX_+_35954355_35954475	1.34782	CRX.p2	AK138385|Mcts1|68995|malignant T cell amplified sequence 1	BC037103|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr5_-_104542751_104542758	1.3317	CRX.p2	BC003759|Sparcl1|13602|SPARC-like 1
mm9_v1_chr17_-_33918382_33918492	1.30504	CRX.p2	AF169313|Angptl4|57875|angiopoietin-like 4	AB054540|Angptl4|57875|angiopoietin-like 4	AF123261|Angptl4|57875|angiopoietin-like 4	AF278699|Angptl4|57875|angiopoietin-like 4	BC025797|Angptl4|57875|angiopoietin-like 4	BC006611|Angptl4|57875|angiopoietin-like 4	BC021343|Angptl4|57875|angiopoietin-like 4	AK032491|Angptl4|57875|angiopoietin-like 4	AK132761|Angptl4|57875|angiopoietin-like 4	AK134419|Angptl4|57875|angiopoietin-like 4
mm9_v1_chr2_+_121184334_121184455	1.27018	CRX.p2	AK131953|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	NM_009897|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	Z13968|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK005076|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK018487|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous
mm9_v1_chr9_-_4796141_4796273	1.24954	CRX.p2	BC060697|Gria4|14802|glutamate receptor, ionotropic, AMPA4 (alpha 4)	AK031568|Gria4|14802|glutamate receptor, ionotropic, AMPA4 (alpha 4)	AK047179|Gria4|14802|glutamate receptor, ionotropic, AMPA4 (alpha 4)	AK032103|Gria4|14802|glutamate receptor, ionotropic, AMPA4 (alpha 4)	NM_001113180|Gria4|14802|glutamate receptor, ionotropic, AMPA4 (alpha 4)	NM_001113181|Gria4|14802|glutamate receptor, ionotropic, AMPA4 (alpha 4)	NM_019691|Gria4|14802|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm9_v1_chr4_-_49858561_49858640	1.23822	CRX.p2	AK162603|Grin3a|242443|glutamate receptor ionotropic, NMDA3A	AK044171|Grin3a|242443|glutamate receptor ionotropic, NMDA3A	AK138366|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chrX_-_161765324_161765332	1.2134	CRX.p2	AK139335|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr2_+_16277963_16277989	1.20144	CRX.p2	AK019482|Plxdc2|67448|plexin domain containing 2	AK154921|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr8_-_70342105_70342226	1.19662	CRX.p2	BC131913|Psd3|234353|pleckstrin and Sec7 domain containing 3	BC145641|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK031477|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK147606|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_027626|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr11_+_109301411_109301484	1.19081	CRX.p2	AK085963|Amz2|13929|archaelysin family metallopeptidase 2
mm9_v1_chr17_-_31774075_31774182	1.12648	CRX.p2	BC013472|Cbs|12411|cystathionine beta-synthase	NM_178224|Cbs|12411|cystathionine beta-synthase	BC013480|Cbs|12411|cystathionine beta-synthase	BC026595|Cbs|12411|cystathionine beta-synthase	NM_144855|Cbs|12411|cystathionine beta-synthase	BC022144|Cbs|12411|cystathionine beta-synthase	AK077669|Cbs|12411|cystathionine beta-synthase	AK085692|Cbs|12411|cystathionine beta-synthase	U43721|Cbs|12411|cystathionine beta-synthase
mm9_v1_chr10_+_4795808_4795848	1.12239	CRX.p2	AF535143|Syne1|64009|synaptic nuclear envelope 1	NM_153399|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr11_+_94871620_94871635	1.10499	CRX.p2	BC049954|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr15_-_54751515_54751700	1.07335	CRX.p2	EU131009|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	EU131010|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_001136077|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC003264|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AF123542|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK088491|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK161144|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK163881|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC058759|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK038940|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_015744|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chr15_+_99223377_99223451	1.06288	CRX.p2	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr18_-_31476721_31476786	1.03363	CRX.p2	U71202|Rit2|19762|Ras-like without CAAX 2	AK162953|Rit2|19762|Ras-like without CAAX 2	AK040743|Rit2|19762|Ras-like without CAAX 2	AK041418|Rit2|19762|Ras-like without CAAX 2	BC018267|Rit2|19762|Ras-like without CAAX 2	NM_009065|Rit2|19762|Ras-like without CAAX 2	AK140726|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr17_+_75835208_75835359	0.984741	CRX.p2	NM_001166493|Rasgrp3|240168|RAS, guanyl releasing protein 3	AK173041|Rasgrp3|240168|RAS, guanyl releasing protein 3
mm9_v1_chr17_+_56904233_56904237	0.982742	CRX.p2	AK157702|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)
mm9_v1_chr5_+_23870625_23870649	0.975112	CRX.p2	AK158106|Nos3|18127|nitric oxide synthase 3, endothelial cell	AK077896|Nos3|18127|nitric oxide synthase 3, endothelial cell	NM_008713|Nos3|18127|nitric oxide synthase 3, endothelial cell	U53142|Nos3|18127|nitric oxide synthase 3, endothelial cell	BC052636|Nos3|18127|nitric oxide synthase 3, endothelial cell
mm9_v1_chrM_+_3320_3438	0.950236	CRX.p2	
mm9_v1_chr11_+_110858832_110858871	0.949578	CRX.p2	AK032192|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	AK140249|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	AK045447|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16
mm9_v1_chr10_-_88067758_88067896	0.943999	CRX.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr16_+_17276384_17276419	0.940173	CRX.p2	NM_177473|Tmem191c|224019|transmembrane protein 191C	AK016675|Tmem191c|224019|transmembrane protein 191C
mm9_v1_chr3_-_90318178_90318313	0.915265	CRX.p2	AK017279|S100a1|20193|S100 calcium binding protein A1	AK168822|S100a1|20193|S100 calcium binding protein A1	AK002721|S100a1|20193|S100 calcium binding protein A1	AF087687|S100a1|20193|S100 calcium binding protein A1	AK012578|S100a1|20193|S100 calcium binding protein A1	NM_011309|S100a1|20193|S100 calcium binding protein A1	BC005590|S100a1|20193|S100 calcium binding protein A1
mm9_v1_chr9_-_30978164_30978202	0.867571	CRX.p2	AK190965|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	M97216|Aplp2|11804|amyloid beta (A4) precursor-like protein 2
mm9_v1_chr16_-_10314010_10314073	0.855112	CRX.p2	AK076194|Emp2|13731|epithelial membrane protein 2	AK077260|Emp2|13731|epithelial membrane protein 2	NM_007929|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr2_-_163470841_163470868	0.850567	CRX.p2	BC029026|Serinc3|26943|serine incorporator 3	BC029980|Serinc3|26943|serine incorporator 3	AK031101|Serinc3|26943|serine incorporator 3
mm9_v1_chrM_+_13320_13486	0.834122	CRX.p2	
mm9_v1_chr2_-_71205805_71205881	0.814639	CRX.p2	BC024952|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm9_v1_chr9_+_89949315_89949397	0.811963	CRX.p2	AK157376|Ctsh|13036|cathepsin H	AK171550|Ctsh|13036|cathepsin H	U06119|Ctsh|13036|cathepsin H	BC080767|Ctsh|13036|cathepsin H	AK151877|Ctsh|13036|cathepsin H	BC006878|Ctsh|13036|cathepsin H	AK017638|Ctsh|13036|cathepsin H	AK160026|Ctsh|13036|cathepsin H	AK167498|Ctsh|13036|cathepsin H	AK150583|Ctsh|13036|cathepsin H	AK149949|Ctsh|13036|cathepsin H
mm9_v1_chr2_-_148701164_148701201	0.811328	CRX.p2	AK161856|Cst3|13010|cystatin C	AK151160|Cst3|13010|cystatin C	AK013676|Cst3|13010|cystatin C	AK153533|Cst3|13010|cystatin C	AK166430|Cst3|13010|cystatin C
mm9_v1_chr5_+_75971011_75971052	0.810333	CRX.p2	NM_001122733|Kit|16590|kit oncogene	NM_021099|Kit|16590|kit oncogene	AK046795|Kit|16590|kit oncogene	AK047010|Kit|16590|kit oncogene	BC026713|Kit|16590|kit oncogene	BC075716|Kit|16590|kit oncogene	BC052457|Kit|16590|kit oncogene	Y00864|Kit|16590|kit oncogene	AY536430|Kit|16590|kit oncogene	AY536431|Kit|16590|kit oncogene
mm9_v1_chr4_+_99768413_99768450	0.803157	CRX.p2	BC095933|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	AK080896|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1
mm9_v1_chr5_-_115140869_115140951	0.780283	CRX.p2	AF209703|Gltp|56356|glycolipid transfer protein	BC053729|Gltp|56356|glycolipid transfer protein	AK157313|Gltp|56356|glycolipid transfer protein	BC016584|Gltp|56356|glycolipid transfer protein	NM_019821|Gltp|56356|glycolipid transfer protein
mm9_v1_chr15_+_99869071_99869185	0.769101	CRX.p2	NM_001159361|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	AK147562|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm9_v1_chr8_+_74135114_74135308	0.767784	CRX.p2	BC018287|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chrX_+_50341236_50341389	0.761571	CRX.p2	NM_013556|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	AK002286|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	AK146626|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	J00423|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	BC004686|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	AK082827|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	AK088114|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	BC083145|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase
mm9_v1_chr11_-_79317583_79317590	0.760046	CRX.p2	NM_019409|Omg|18377|oligodendrocyte myelin glycoprotein	AK136910|Omg|18377|oligodendrocyte myelin glycoprotein
mm9_v1_chr19_+_4231936_4231998	0.758509	CRX.p2	AK010477|Pold4|69745|polymerase (DNA-directed), delta 4	BC028520|Pold4|69745|polymerase (DNA-directed), delta 4	AF515709|Pold4|69745|polymerase (DNA-directed), delta 4
mm9_v1_chr4_+_120712170_120712207	0.753535	CRX.p2	NM_007741|Col9a2|12840|collagen, type IX, alpha 2
mm9_v1_chr7_-_30066910_30067008	0.748537	CRX.p2	AF099016|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099019|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099020|Spint2|20733|serine protease inhibitor, Kunitz type 2	BC003431|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_001082548|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_011464|Spint2|20733|serine protease inhibitor, Kunitz type 2
mm9_v1_chr13_-_19711409_19711707	0.746411	CRX.p2	DQ914440|Epdr1|105298|ependymin related protein 1 (zebrafish)	AF353717|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK192851|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK160413|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK166252|Epdr1|105298|ependymin related protein 1 (zebrafish)	BC014708|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK034083|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK038733|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK046185|Epdr1|105298|ependymin related protein 1 (zebrafish)	NM_134065|Epdr1|105298|ependymin related protein 1 (zebrafish)
mm9_v1_chr11_-_83881811_83881914	0.722307	CRX.p2	BC002130|Dusp14|56405|dual specificity phosphatase 14	AK166230|Dusp14|56405|dual specificity phosphatase 14	AK079362|Dusp14|56405|dual specificity phosphatase 14	NM_019819|Dusp14|56405|dual specificity phosphatase 14	AK163738|Dusp14|56405|dual specificity phosphatase 14
mm9_v1_chr10_-_128240935_128241048	0.719569	CRX.p2	AK207701|1110012D08Rik|73827|RIKEN cDNA 1110012D08 gene	AK054166|1110012D08Rik|73827|RIKEN cDNA 1110012D08 gene
mm9_v1_chr6_-_120772683_120772817	0.713225	CRX.p2	BC003421|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1	NM_007510|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1	AB074758|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1	AK146162|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1	AK169854|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1	AK010603|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1	AK139791|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1	AK149356|Atp6v1e1|11973|ATPase, H+ transporting, lysosomal V1 subunit E1
mm9_v1_chr16_-_31314534_31314685	0.704032	CRX.p2	X82648|Apod|11815|apolipoprotein D	AK158118|Apod|11815|apolipoprotein D	AK157925|Apod|11815|apolipoprotein D	AK135046|Apod|11815|apolipoprotein D	AK157917|Apod|11815|apolipoprotein D	AK160729|Apod|11815|apolipoprotein D	AK162392|Apod|11815|apolipoprotein D	NM_007470|Apod|11815|apolipoprotein D	AK158405|Apod|11815|apolipoprotein D
mm9_v1_chr18_-_10610261_10610307	0.694533	CRX.p2	BC151069|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	BC151077|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	BC172153|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm9_v1_chr7_-_4704436_4704695	0.683591	CRX.p2	CT010366|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	BC048670|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	NM_183406|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	AK160152|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	BC125562|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	BC125564|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	BC145201|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	BC107296|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	BC107297|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	AY152400|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2	NM_183405|Cox6b2|333182|cytochrome c oxidase subunit VIb polypeptide 2
mm9_v1_chrX_+_130829763_130829919	0.667064	CRX.p2	BC042623|Tmem35|67564|transmembrane protein 35	NM_026239|Tmem35|67564|transmembrane protein 35	BC050880|Tmem35|67564|transmembrane protein 35
mm9_v1_chr5_-_145522423_145522496	0.663121	CRX.p2	BC127616|Tmem130|243339|transmembrane protein 130	BC127617|Tmem130|243339|transmembrane protein 130	BC067004|Tmem130|243339|transmembrane protein 130	NM_177735|Tmem130|243339|transmembrane protein 130
mm9_v1_chr18_+_37678006_37678134	0.662134	CRX.p2	AK043492|Pcdhb22|93893|protocadherin beta 22	NM_053147|Pcdhb22|93893|protocadherin beta 22	BC094239|Pcdhb22|93893|protocadherin beta 22	AF326315|Pcdhb22|93893|protocadherin beta 22	AY013784|Pcdhb22|93893|protocadherin beta 22
mm9_v1_chr2_+_164328123_164328160	0.653738	CRX.p2	AK177432|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T
mm9_v1_chr2_-_93662687_93662734	0.637385	CRX.p2	BC006597|Ext2|14043|exostoses (multiple) 2	U67837|Ext2|14043|exostoses (multiple) 2	U72141|Ext2|14043|exostoses (multiple) 2	AK152265|Ext2|14043|exostoses (multiple) 2	AK152840|Ext2|14043|exostoses (multiple) 2	AK082572|Ext2|14043|exostoses (multiple) 2	AK084772|Ext2|14043|exostoses (multiple) 2	AK164342|Ext2|14043|exostoses (multiple) 2	AK148090|Ext2|14043|exostoses (multiple) 2	AK150155|Ext2|14043|exostoses (multiple) 2	NM_010163|Ext2|14043|exostoses (multiple) 2
mm9_v1_chr5_+_64203602_64203733	0.636658	CRX.p2	AK050792|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	AK002869|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	NM_029554|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene
mm9_v1_chr2_+_145686377_145686454	0.634965	CRX.p2	AK014548|Rin2|74030|Ras and Rab interactor 2	AK040763|Rin2|74030|Ras and Rab interactor 2	AK152025|Rin2|74030|Ras and Rab interactor 2	BC005529|Rin2|74030|Ras and Rab interactor 2	AK154421|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr9_-_21722533_21722626	0.633048	CRX.p2	BC010779|Rab3d|19340|RAB3D, member RAS oncogene family	AF263365|Rab3d|19340|RAB3D, member RAS oncogene family	AK078462|Rab3d|19340|RAB3D, member RAS oncogene family	AK169369|Rab3d|19340|RAB3D, member RAS oncogene family	NM_031874|Rab3d|19340|RAB3D, member RAS oncogene family	BC020010|Rab3d|19340|RAB3D, member RAS oncogene family	AK048395|Rab3d|19340|RAB3D, member RAS oncogene family
mm9_v1_chr17_-_43803963_43804162	0.631341	CRX.p2	AK014394|Slc25a27|74011|solute carrier family 25, member 27	NM_028711|Slc25a27|74011|solute carrier family 25, member 27	BC138993|Slc25a27|74011|solute carrier family 25, member 27	BC138994|Slc25a27|74011|solute carrier family 25, member 27	AB106930|Slc25a27|74011|solute carrier family 25, member 27	AK021314|Slc25a27|74011|solute carrier family 25, member 27	AK043831|Slc25a27|74011|solute carrier family 25, member 27
mm9_v1_chr17_-_57387033_57387124	0.629775	CRX.p2	AK047364|Gpr108|78308|G protein-coupled receptor 108	AF376726|Gpr108|78308|G protein-coupled receptor 108	AX775897|Gpr108|78308|G protein-coupled receptor 108	AK082797|Gpr108|78308|G protein-coupled receptor 108	BC016104|Gpr108|78308|G protein-coupled receptor 108	NM_030084|Gpr108|78308|G protein-coupled receptor 108	AK159313|Gpr108|78308|G protein-coupled receptor 108	AK170948|Gpr108|78308|G protein-coupled receptor 108	AK171030|Gpr108|78308|G protein-coupled receptor 108	AX775895|Gpr108|78308|G protein-coupled receptor 108
mm9_v1_chr10_+_93661746_93661761	0.627286	CRX.p2	BC086922|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK010460|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	NM_025551|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
mm9_v1_chr17_-_30749591_30749606	0.625834	CRX.p2	NM_001113560|Glo1|109801|glyoxalase 1	NM_025374|Glo1|109801|glyoxalase 1
mm9_v1_chr1_+_43787537_43787625	0.622994	CRX.p2	BC002254|1500015O10Rik|78896|RIKEN cDNA 1500015O10 gene
mm9_v1_chr14_+_34767188_34767245	0.617726	CRX.p2	BC083133|Rbp3|19661|retinol binding protein 3, interstitial	BC017610|Rbp3|19661|retinol binding protein 3, interstitial	NM_015745|Rbp3|19661|retinol binding protein 3, interstitial	BC040282|Rbp3|19661|retinol binding protein 3, interstitial	BC042480|Rbp3|19661|retinol binding protein 3, interstitial
mm9_v1_chr5_+_27588579_27588623	0.615348	CRX.p2	BC048383|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr7_+_4866810_4866885	0.612623	CRX.p2	AK155214|Zfp628|232816|zinc finger protein 628	NM_170759|Zfp628|232816|zinc finger protein 628	AK048291|Zfp628|232816|zinc finger protein 628	BC056945|Zfp628|232816|zinc finger protein 628	BC062973|Zfp628|232816|zinc finger protein 628
mm9_v1_chr3_+_90318894_90318921	0.609956	CRX.p2	X99921|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr4_-_43053029_43053168	0.609363	CRX.p2	AK149610|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	AK154748|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	BC046771|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene
mm9_v1_chr11_-_102786433_102786439	0.603716	CRX.p2	NM_197959|Kif18b|70218|kinesin family member 18B
mm9_v1_chr2_-_26236126_26236172	0.601389	CRX.p2	BC018169|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	AK077522|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	BC057031|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	AK136996|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	AK052107|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	NM_172339|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4
mm9_v1_chr12_+_110784600_110784655	0.59901	CRX.p2	AK032021|Meg3|17263|maternally expressed 3	AK141629|Meg3|17263|maternally expressed 3
mm9_v1_chr10_+_98725858_98725868	0.5893	CRX.p2	AK088665|Dusp6|67603|dual specificity phosphatase 6	AK005062|Dusp6|67603|dual specificity phosphatase 6	AK088468|Dusp6|67603|dual specificity phosphatase 6	AK148192|Dusp6|67603|dual specificity phosphatase 6	AK159502|Dusp6|67603|dual specificity phosphatase 6	NM_026268|Dusp6|67603|dual specificity phosphatase 6	AK151126|Dusp6|67603|dual specificity phosphatase 6	AK152773|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr3_+_95985065_95985205	0.576857	CRX.p2	AK080525|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK144166|Sv2a|64051|synaptic vesicle glycoprotein 2 a	BC046587|Sv2a|64051|synaptic vesicle glycoprotein 2 a	NM_022030|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK080502|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK028318|Sv2a|64051|synaptic vesicle glycoprotein 2 a
mm9_v1_chr1_+_45368443_45368526	0.563742	CRX.p2	AK220558|Col3a1|12825|collagen, type III, alpha 1	AK013329|Col3a1|12825|collagen, type III, alpha 1	AK041115|Col3a1|12825|collagen, type III, alpha 1	AK048546|Col3a1|12825|collagen, type III, alpha 1	AK157762|Col3a1|12825|collagen, type III, alpha 1	AK159763|Col3a1|12825|collagen, type III, alpha 1	AK159920|Col3a1|12825|collagen, type III, alpha 1	AK160048|Col3a1|12825|collagen, type III, alpha 1	AK160107|Col3a1|12825|collagen, type III, alpha 1	AK160818|Col3a1|12825|collagen, type III, alpha 1	AK147542|Col3a1|12825|collagen, type III, alpha 1	AK159985|Col3a1|12825|collagen, type III, alpha 1	AK029212|Col3a1|12825|collagen, type III, alpha 1	BC052398|Col3a1|12825|collagen, type III, alpha 1	BC043089|Col3a1|12825|collagen, type III, alpha 1	AK031544|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr3_+_88168495_88168520	0.558994	CRX.p2	AK139144|Paqr6|68957|progestin and adipoQ receptor family member VI	AY424295|Paqr6|68957|progestin and adipoQ receptor family member VI	NM_198410|Paqr6|68957|progestin and adipoQ receptor family member VI
mm9_v1_chrX_+_54306724_54306791	0.558311	CRX.p2	AK012522|Htatsf1|72459|HIV TAT specific factor 1	BC037711|Htatsf1|72459|HIV TAT specific factor 1	NM_028242|Htatsf1|72459|HIV TAT specific factor 1
mm9_v1_chr4_+_9196439_9196508	0.554773	CRX.p2	AK034888|Clvs1|74438|clavesin 1	AK083985|Clvs1|74438|clavesin 1	AK047462|Clvs1|74438|clavesin 1	AK083810|Clvs1|74438|clavesin 1	NM_028940|Clvs1|74438|clavesin 1	AK084350|Clvs1|74438|clavesin 1	AK043072|Clvs1|74438|clavesin 1	AK032549|Clvs1|74438|clavesin 1	BC062923|Clvs1|74438|clavesin 1
mm9_v1_chr19_+_45122281_45122364	0.54003	CRX.p2	AK154274|Sfxn3|94280|sideroflexin 3	AF325262|Sfxn3|94280|sideroflexin 3	AK089985|Sfxn3|94280|sideroflexin 3	AK184595|Sfxn3|94280|sideroflexin 3	AK206211|Sfxn3|94280|sideroflexin 3	AK034514|Sfxn3|94280|sideroflexin 3
mm9_v1_chr9_-_58160966_58161035	0.539649	CRX.p2	BC098243|Loxl1|16949|lysyl oxidase-like 1	BC037999|Loxl1|16949|lysyl oxidase-like 1	AK078512|Loxl1|16949|lysyl oxidase-like 1	NM_010729|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr10_-_127617294_127617366	0.537534	CRX.p2	AK147838|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	NM_001039080|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chrM_+_1091_1314	0.535523	CRX.p2	
mm9_v1_chr6_-_113481546_113481673	0.532824	CRX.p2	AK020058|Tmem111|66087|transmembrane protein 111	AK046264|Tmem111|66087|transmembrane protein 111	BC004641|Tmem111|66087|transmembrane protein 111	AK075595|Tmem111|66087|transmembrane protein 111	NM_175101|Tmem111|66087|transmembrane protein 111	AK164779|Tmem111|66087|transmembrane protein 111
mm9_v1_chr3_+_90341208_90341304	0.532317	CRX.p2	AK160178|S100a16|67860|S100 calcium binding protein A16	AK009762|S100a16|67860|S100 calcium binding protein A16	AK160512|S100a16|67860|S100 calcium binding protein A16	AK167006|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr11_+_101017197_101017233	0.528315	CRX.p2	NM_134028|Tubg2|103768|tubulin, gamma 2	BC019652|Tubg2|103768|tubulin, gamma 2	BC078446|Tubg2|103768|tubulin, gamma 2
mm9_v1_chr15_+_20378816_20378944	0.527243	CRX.p2	
mm9_v1_chr4_-_41261743_41261803	0.526539	CRX.p2	AK173289|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr1_+_63492447_63492511	0.526252	CRX.p2	AK046677|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_001177600|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_011780|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK034022|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK083458|Adam23|23792|a disintegrin and metallopeptidase domain 23
mm9_v1_chrM_+_13543_13577	0.524864	CRX.p2	
mm9_v1_chr6_+_54222814_54222856	0.524303	CRX.p2	BC051139|Chn2|69993|chimerin (chimaerin) 2	NM_023543|Chn2|69993|chimerin (chimaerin) 2	BC141060|Chn2|69993|chimerin (chimaerin) 2
mm9_v1_chr2_-_4984983_4985031	0.524165	CRX.p2	BC061185|Optn|71648|optineurin	NM_181848|Optn|71648|optineurin
mm9_v1_chr7_-_20283542_20283606	0.523716	CRX.p2	CT010212|Apoe|11816|apolipoprotein E	CT010356|Apoe|11816|apolipoprotein E	M12414|Apoe|11816|apolipoprotein E
mm9_v1_chr14_+_48740495_48740543	0.523265	CRX.p2	AK030564|Peli2|93834|pellino 2	AK045515|Peli2|93834|pellino 2	NM_033602|Peli2|93834|pellino 2
mm9_v1_chr1_+_179913535_179913568	0.522803	CRX.p2	AK139440|Gm16432|545391|predicted gene 16432
mm9_v1_chr4_+_80556574_80556717	0.520387	CRX.p2	NM_026821|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC030404|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC021501|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed
mm9_v1_chr7_-_7252221_7252267	0.518443	CRX.p2	BC110668|Clcn4-2|12727|chloride channel 4-2	NM_011334|Clcn4-2|12727|chloride channel 4-2	BC089497|Clcn4-2|12727|chloride channel 4-2
mm9_v1_chr3_-_146433544_146433656	0.516918	CRX.p2	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr2_-_127346987_127347085	0.516307	CRX.p2	AF274050|Kcnip3|56461|Kv channel interacting protein 3, calsenilin	DQ148499|Kcnip3|56461|Kv channel interacting protein 3, calsenilin	AF300870|Kcnip3|56461|Kv channel interacting protein 3, calsenilin	BC057329|Kcnip3|56461|Kv channel interacting protein 3, calsenilin	BC026980|Kcnip3|56461|Kv channel interacting protein 3, calsenilin	BC047139|Kcnip3|56461|Kv channel interacting protein 3, calsenilin	AK165711|Kcnip3|56461|Kv channel interacting protein 3, calsenilin	AF184624|Kcnip3|56461|Kv channel interacting protein 3, calsenilin
mm9_v1_chr2_+_62502329_62502489	0.509493	CRX.p2	AK046347|Gca|227960|grancalcin	AK050540|Gca|227960|grancalcin	AK033740|Gca|227960|grancalcin	AK040549|Gca|227960|grancalcin	AK049317|Gca|227960|grancalcin	AK078915|Gca|227960|grancalcin	NM_145523|Gca|227960|grancalcin	AF518325|Gca|227960|grancalcin	BC021450|Gca|227960|grancalcin	AB088388|Gca|227960|grancalcin
mm9_v1_chr9_+_110235922_110235986	0.508987	CRX.p2	AK035432|Scap|235623|SREBF chaperone
mm9_v1_chr10_-_30522912_30522956	0.503208	CRX.p2	NM_172495|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr4_+_99768456_99768466	0.498388	CRX.p2	AK087548|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1
mm9_v1_chr11_-_69651218_69651315	0.496464	CRX.p2	AK136883|Nlgn2|216856|neuroligin 2
mm9_v1_chrX_-_161764912_161765057	0.493383	CRX.p2	BC056342|Glra2|237213|glycine receptor, alpha 2 subunit	BC068987|Glra2|237213|glycine receptor, alpha 2 subunit	NM_183427|Glra2|237213|glycine receptor, alpha 2 subunit	AK135134|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr8_+_36650839_36650928	0.493227	CRX.p2	BC082308|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1	NM_001081279|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr11_+_78312621_78312770	0.483076	CRX.p2	NM_011707|Vtn|22370|vitronectin	AK011736|Vtn|22370|vitronectin	AK090325|Vtn|22370|vitronectin	AK167494|Vtn|22370|vitronectin
mm9_v1_chr2_-_73150559_73150757	0.482335	CRX.p2	AK006260|Cir1|66935|corepressor interacting with RBPJ, 1	BC061077|Cir1|66935|corepressor interacting with RBPJ, 1	BC094283|Cir1|66935|corepressor interacting with RBPJ, 1	BC089602|Cir1|66935|corepressor interacting with RBPJ, 1	AK008242|Cir1|66935|corepressor interacting with RBPJ, 1	BC099444|Cir1|66935|corepressor interacting with RBPJ, 1	AK131674|Cir1|66935|corepressor interacting with RBPJ, 1	NM_025854|Cir1|66935|corepressor interacting with RBPJ, 1	BC012219|Cir1|66935|corepressor interacting with RBPJ, 1
mm9_v1_chr12_+_56499902_56499913	0.471372	CRX.p2	AF060087|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6
mm9_v1_chr14_-_32454060_32454136	0.468648	CRX.p2	BC021360|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK161488|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK005505|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr2_+_16277924_16277950	0.459649	CRX.p2	AK035165|Plxdc2|67448|plexin domain containing 2	AK004640|Plxdc2|67448|plexin domain containing 2	NM_026162|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr14_+_21526757_21526874	0.456861	CRX.p2	AK147398|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	NM_027996|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	AK053265|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151046|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151056|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151173|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC172103|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene
mm9_v1_chr18_-_35900005_35900208	0.453759	CRX.p2	DQ910493|Tmem173|72512|transmembrane protein 173	AK153868|Tmem173|72512|transmembrane protein 173	AK146284|Tmem173|72512|transmembrane protein 173	AX775911|Tmem173|72512|transmembrane protein 173	AK077788|Tmem173|72512|transmembrane protein 173	AK157370|Tmem173|72512|transmembrane protein 173	AK158458|Tmem173|72512|transmembrane protein 173	BC046640|Tmem173|72512|transmembrane protein 173	AK171612|Tmem173|72512|transmembrane protein 173	AK012006|Tmem173|72512|transmembrane protein 173	AK171065|Tmem173|72512|transmembrane protein 173	AK171203|Tmem173|72512|transmembrane protein 173	AK089405|Tmem173|72512|transmembrane protein 173	AK170724|Tmem173|72512|transmembrane protein 173	NM_028261|Tmem173|72512|transmembrane protein 173
mm9_v1_chrX_-_7709907_7709983	0.45152	CRX.p2	BC080853|Wdr13|73447|WD repeat domain 13	BC057366|Wdr13|73447|WD repeat domain 13	NM_026137|Wdr13|73447|WD repeat domain 13
mm9_v1_chr2_+_97307652_97307938	0.451133	CRX.p2	AK032467|Lrrc4c|241568|leucine rich repeat containing 4C	AK032088|Lrrc4c|241568|leucine rich repeat containing 4C	NM_178725|Lrrc4c|241568|leucine rich repeat containing 4C	BC094588|Lrrc4c|241568|leucine rich repeat containing 4C
mm9_v1_chr11_-_54769546_54769594	0.450118	CRX.p2	BC008186|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr7_+_90733436_90733440	0.449948	CRX.p2	AY236491|Tmc3|233424|transmembrane channel-like gene family 3	AK033432|Tmc3|233424|transmembrane channel-like gene family 3	AY263157|Tmc3|233424|transmembrane channel-like gene family 3	NM_177695|Tmc3|233424|transmembrane channel-like gene family 3
mm9_v1_chr18_+_37560490_37560542	0.448914	CRX.p2	AK032626|Pcdhb9|93880|protocadherin beta 9	NM_053134|Pcdhb9|93880|protocadherin beta 9	BC055319|Pcdhb9|93880|protocadherin beta 9	BC062640|Pcdhb9|93880|protocadherin beta 9
mm9_v1_chr5_+_130505237_130505255	0.439781	CRX.p2	BC012676|Crcp|12909|calcitonin gene-related peptide-receptor component protein
mm9_v1_chr2_+_180701920_180701946	0.439199	CRX.p2	NM_001177707|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177708|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177709|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177710|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_145760|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK145879|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr7_-_13623543_13623681	0.437508	CRX.p2	NM_001168469|Ube2m|22192|ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast)
mm9_v1_chr9_+_64026089_64026214	0.437261	CRX.p2	
mm9_v1_chr19_-_5801766_5801972	0.426067	CRX.p2	BC094333|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC039749|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC004722|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr6_+_18120686_18120770	0.425317	CRX.p2	M60493|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	M69298|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	NM_021050|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	AK033621|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog
mm9_v1_chr4_-_118162385_118162453	0.421775	CRX.p2	AK052413|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK051512|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_011587|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr6_+_90500855_90500862	0.413351	CRX.p2	BC030727|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC030722|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC025939|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1
mm9_v1_chr1_-_74982118_74982188	0.407982	CRX.p2	BC150939|Ccdc108|241116|coiled-coil domain containing 108	AK038623|Ccdc108|241116|coiled-coil domain containing 108	AK046272|Ccdc108|241116|coiled-coil domain containing 108	AK133278|Ccdc108|241116|coiled-coil domain containing 108	NM_001039495|Ccdc108|241116|coiled-coil domain containing 108
mm9_v1_chr7_-_20282950_20283001	0.406888	CRX.p2	M73490|Apoe|11816|apolipoprotein E
mm9_v1_chr8_+_74094553_74094637	0.406858	CRX.p2	AK138548|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	AK155185|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	U15976|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	AK164798|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr11_+_67466072_67466088	0.405577	CRX.p2	AF133184|Gas7|14457|growth arrest specific 7
mm9_v1_chr5_+_31117077_31117214	0.404297	CRX.p2	BC048833|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AF468005|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	BC057918|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	NM_133350|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AK177097|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr14_-_78488780_78488813	0.401057	CRX.p2	BC120488|AU021034|219170|expressed sequence AU021034	BC120490|AU021034|219170|expressed sequence AU021034	AK047611|AU021034|219170|expressed sequence AU021034	AK034132|AU021034|219170|expressed sequence AU021034	NM_177629|AU021034|219170|expressed sequence AU021034
mm9_v1_chr5_-_31597792_31598351	0.400673	CRX.p2	BC139278|Fndc4|64339|fibronectin type III domain containing 4	BC139292|Fndc4|64339|fibronectin type III domain containing 4	AK018154|Fndc4|64339|fibronectin type III domain containing 4	AK013203|Fndc4|64339|fibronectin type III domain containing 4	AK163183|Fndc4|64339|fibronectin type III domain containing 4	NM_022424|Fndc4|64339|fibronectin type III domain containing 4
mm9_v1_chr11_+_4118227_4118272	0.398264	CRX.p2	AK170245|Gatsl3|71962|GATS protein-like 3	BC039988|Gatsl3|71962|GATS protein-like 3	NM_028022|Gatsl3|71962|GATS protein-like 3	AK010455|Gatsl3|71962|GATS protein-like 3
mm9_v1_chr11_+_22872062_22872100	0.398246	CRX.p2	AK165562|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1
mm9_v1_chr9_-_50425561_50425568	0.396038	CRX.p2	NM_001134902|AU019823|270156|expressed sequence AU019823	NM_212449|AU019823|270156|expressed sequence AU019823
mm9_v1_chr10_+_62562532_62562550	0.395506	CRX.p2	BC092234|Atoh7|53404|atonal homolog 7 (Drosophila)
mm9_v1_chr16_+_57152994_57153228	0.393866	CRX.p2	BC025450|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK011763|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chr7_+_51639464_51639527	0.39378	CRX.p2	NM_001114116|Syt3|20981|synaptotagmin III	NM_016663|Syt3|20981|synaptotagmin III
mm9_v1_chr17_-_26078825_26078928	0.393312	CRX.p2	AK155173|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK016852|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK137390|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK033349|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK170431|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AB008895|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	BC014287|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	NM_011822|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK163680|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK169284|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q
mm9_v1_chr11_-_116442760_116442770	0.392883	CRX.p2	AK129431|Ube2o|217342|ubiquitin-conjugating enzyme E2O	NM_173755|Ube2o|217342|ubiquitin-conjugating enzyme E2O
mm9_v1_chr7_+_25862367_25862378	0.392281	CRX.p2	BC054064|Zfp574|232976|zinc finger protein 574
mm9_v1_chr11_+_22872016_22872058	0.391965	CRX.p2	NM_011663|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	D17407|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	S69507|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1
mm9_v1_chrX_-_159326220_159326424	0.390448	CRX.p2	BC021373|Syap1|67043|synapse associated protein 1	AK147055|Syap1|67043|synapse associated protein 1	AK154843|Syap1|67043|synapse associated protein 1	AK051251|Syap1|67043|synapse associated protein 1	AK161413|Syap1|67043|synapse associated protein 1	AK008390|Syap1|67043|synapse associated protein 1	AK014893|Syap1|67043|synapse associated protein 1	AK011337|Syap1|67043|synapse associated protein 1	NM_025932|Syap1|67043|synapse associated protein 1
mm9_v1_chr19_+_3935169_3935313	0.386445	CRX.p2	NM_001161428|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	NM_019449|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	BC018388|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK030488|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK039526|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK165060|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK155556|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK162535|Unc93b1|54445|unc-93 homolog B1 (C. elegans)
mm9_v1_chr8_+_72655224_72655304	0.38461	CRX.p2	AK010864|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	NM_001025586|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	NM_001025587|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	AK160346|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	AK168268|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	AK010140|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	BC092288|Nr2c2ap|75692|nuclear receptor 2C2-associated protein
mm9_v1_chr16_-_85015494_85015607	0.381017	CRX.p2	AK209458|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chrM_+_3844_3864	0.37854	CRX.p2	
mm9_v1_chr19_-_23522811_23522929	0.377943	CRX.p2	AK035566|Mamdc2|71738|MAM domain containing 2	NM_174857|Mamdc2|71738|MAM domain containing 2	BC042773|Mamdc2|71738|MAM domain containing 2	AK154219|Mamdc2|71738|MAM domain containing 2	AK004794|Mamdc2|71738|MAM domain containing 2
mm9_v1_chr18_+_82753560_82753917	0.374984	CRX.p2	AK205832|Mbp|17196|myelin basic protein	AK195683|Mbp|17196|myelin basic protein	AK198099|Mbp|17196|myelin basic protein
mm9_v1_chr11_+_116060160_116060223	0.373668	CRX.p2	NM_027107|2310004N24Rik|69535|RIKEN cDNA 2310004N24 gene	AK146257|2310004N24Rik|69535|RIKEN cDNA 2310004N24 gene	AK009156|2310004N24Rik|69535|RIKEN cDNA 2310004N24 gene	BC027639|2310004N24Rik|69535|RIKEN cDNA 2310004N24 gene
mm9_v1_chr18_-_31476527_31476591	0.359275	CRX.p2	AK046484|Rit2|19762|Ras-like without CAAX 2	AK138206|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr3_+_97432726_97432760	0.356909	CRX.p2	AK162951|Fmo5|14263|flavin containing monooxygenase 5	NM_001161763|Fmo5|14263|flavin containing monooxygenase 5	AK147040|Fmo5|14263|flavin containing monooxygenase 5	NM_001161765|Fmo5|14263|flavin containing monooxygenase 5	NM_010232|Fmo5|14263|flavin containing monooxygenase 5
mm9_v1_chr7_+_134072351_134072419	0.354635	CRX.p2	AK075722|Kctd13|233877|potassium channel tetramerisation domain containing 13	NM_172747|Kctd13|233877|potassium channel tetramerisation domain containing 13	BC079607|Kctd13|233877|potassium channel tetramerisation domain containing 13	AF534881|Kctd13|233877|potassium channel tetramerisation domain containing 13
mm9_v1_chr1_-_164790079_164790095	0.353637	CRX.p2	AK042457|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr8_+_72332573_72332679	0.352953	CRX.p2	AK043883|Gmip|78816|Gem-interacting protein	BC057037|Gmip|78816|Gem-interacting protein	NM_198101|Gmip|78816|Gem-interacting protein	AK082337|Gmip|78816|Gem-interacting protein	AK172438|Gmip|78816|Gem-interacting protein	BC060628|Gmip|78816|Gem-interacting protein	AK137177|Gmip|78816|Gem-interacting protein	AK052221|Gmip|78816|Gem-interacting protein
mm9_v1_chr6_+_71443847_71443870	0.35137	CRX.p2	AK134602|Rnf103|22644|ring finger protein 103
mm9_v1_chr2_-_127347102_127347108	0.349764	CRX.p2	AF287732|Kcnip3|56461|Kv channel interacting protein 3, calsenilin	AF287733|Kcnip3|56461|Kv channel interacting protein 3, calsenilin	NM_019789|Kcnip3|56461|Kv channel interacting protein 3, calsenilin
mm9_v1_chr1_-_156993820_156993943	0.347921	CRX.p2	AF010448|Mr1|15064|major histocompatibility complex, class I-related	AF010449|Mr1|15064|major histocompatibility complex, class I-related	AF010450|Mr1|15064|major histocompatibility complex, class I-related	AF010452|Mr1|15064|major histocompatibility complex, class I-related	AF010453|Mr1|15064|major histocompatibility complex, class I-related	U94989|Mr1|15064|major histocompatibility complex, class I-related	AK162712|Mr1|15064|major histocompatibility complex, class I-related	NM_008209|Mr1|15064|major histocompatibility complex, class I-related	BC026137|Mr1|15064|major histocompatibility complex, class I-related	AK042119|Mr1|15064|major histocompatibility complex, class I-related	AK137171|Mr1|15064|major histocompatibility complex, class I-related	AK144040|Mr1|15064|major histocompatibility complex, class I-related	AK041171|Mr1|15064|major histocompatibility complex, class I-related
mm9_v1_chr16_-_35769389_35769480	0.347134	CRX.p2	BC037460|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK034214|Dirc2|224132|disrupted in renal carcinoma 2 (human)	NM_153550|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK172331|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr9_+_96619800_96619904	0.346725	CRX.p2	AK081067|Gm6328|622512|predicted gene 6328
mm9_v1_chr3_-_152645143_152645180	0.345615	CRX.p2	AB028840|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	BC055737|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	NM_012028|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AB030836|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK034387|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK038434|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr16_-_36784864_36785047	0.343188	CRX.p2	BC018335|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AK128939|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AK018393|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC138627|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC138628|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC051199|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AF111811|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	NM_001145899|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	NM_021301|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2
mm9_v1_chr10_+_126602394_126602451	0.342984	CRX.p2	BC022180|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr7_+_25292375_25292405	0.34272	CRX.p2	AK139174|Zfp428|232969|zinc finger protein 428
mm9_v1_chr11_-_41814008_41814185	0.338358	CRX.p2	M86572|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	BC031762|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	M62374|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_008073|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK034338|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr6_+_122463663_122463700	0.338075	CRX.p2	AK003479|Mfap5|50530|microfibrillar associated protein 5	AF180805|Mfap5|50530|microfibrillar associated protein 5	NM_015776|Mfap5|50530|microfibrillar associated protein 5	BC025131|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr19_-_4011251_4011428	0.335285	CRX.p2	AK189391|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK206448|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm9_v1_chrM_+_7714_7790	0.334745	CRX.p2	AF093677|ATP6|17705|ATP synthase F0 subunit 6	BC069931|Gm10925|100191075|predicted gene 10925
mm9_v1_chr4_+_143002828_143002889	0.334741	CRX.p2	AK054398|Pramef8|242736|PRAME family member 8	BC056931|Pramef8|242736|PRAME family member 8
mm9_v1_chrM_+_11027_11268	0.330192	CRX.p2	
mm9_v1_chr1_+_169528492_169528646	0.330003	CRX.p2	NM_009107|Rxrg|20183|retinoid X receptor gamma	BC058401|Rxrg|20183|retinoid X receptor gamma	S62948|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr16_+_44765848_44765938	0.327649	CRX.p2	NM_021325|Cd200r1|57781|CD200 receptor 1	AK154325|Cd200r1|57781|CD200 receptor 1	AK154722|Cd200r1|57781|CD200 receptor 1	BC052682|Cd200r1|57781|CD200 receptor 1	AK089173|Cd200r1|57781|CD200 receptor 1	AK089415|Cd200r1|57781|CD200 receptor 1	AK170735|Cd200r1|57781|CD200 receptor 1	AK171590|Cd200r1|57781|CD200 receptor 1	AK171130|Cd200r1|57781|CD200 receptor 1	AK054236|Cd200r1|57781|CD200 receptor 1
mm9_v1_chr4_+_155078923_155078923	0.327485	CRX.p2	NM_026899|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm9_v1_chr12_+_117519658_117519785	0.321465	CRX.p2	AK044360|Esyt2|52635|extended synaptotagmin-like protein 2	NM_028731|Esyt2|52635|extended synaptotagmin-like protein 2	AK014813|Esyt2|52635|extended synaptotagmin-like protein 2	AK157352|Esyt2|52635|extended synaptotagmin-like protein 2	BC138937|Esyt2|52635|extended synaptotagmin-like protein 2
mm9_v1_chr11_-_100632238_100632274	0.321183	CRX.p2	AK143922|Ghdc|80860|GH3 domain containing	BC005639|Ghdc|80860|GH3 domain containing	AK135322|Ghdc|80860|GH3 domain containing	AF316996|Ghdc|80860|GH3 domain containing	NM_031871|Ghdc|80860|GH3 domain containing
mm9_v1_chr11_-_106128935_106128945	0.319864	CRX.p2	BC005732|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	NM_031878|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm9_v1_chr4_-_131909584_131909605	0.318585	CRX.p2	BC100513|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3
mm9_v1_chr5_-_130285076_130285140	0.315193	CRX.p2	BC002251|Psph|100678|phosphoserine phosphatase	AK168048|Psph|100678|phosphoserine phosphatase
mm9_v1_chr10_+_80847168_80847285	0.313308	CRX.p2	AK154104|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase	NM_133964|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase	AK004052|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase	AK080664|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase	BC002295|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase
mm9_v1_chr11_+_97660946_97661134	0.312999	CRX.p2	X96702|Lasp1|16796|LIM and SH3 protein 1	AK148858|Lasp1|16796|LIM and SH3 protein 1	AK034404|Lasp1|16796|LIM and SH3 protein 1	AK049199|Lasp1|16796|LIM and SH3 protein 1	AK078445|Lasp1|16796|LIM and SH3 protein 1	AK168521|Lasp1|16796|LIM and SH3 protein 1	AK169381|Lasp1|16796|LIM and SH3 protein 1	NM_010688|Lasp1|16796|LIM and SH3 protein 1	AK154656|Lasp1|16796|LIM and SH3 protein 1	BC010840|Lasp1|16796|LIM and SH3 protein 1	X96973|Lasp1|16796|LIM and SH3 protein 1	CT010288|Lasp1|16796|LIM and SH3 protein 1
mm9_v1_chr4_+_8462766_8462804	0.310271	CRX.p2	AK159607|Rab2a|59021|RAB2A, member RAS oncogene family	AK079071|Rab2a|59021|RAB2A, member RAS oncogene family	AK160333|Rab2a|59021|RAB2A, member RAS oncogene family	NM_021518|Rab2a|59021|RAB2A, member RAS oncogene family	BC058382|Rab2a|59021|RAB2A, member RAS oncogene family	X95403|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr11_+_59661532_59661635	0.307929	CRX.p2	BC020084|Nt5m|103850|5',3'-nucleotidase, mitochondrial	NM_134029|Nt5m|103850|5',3'-nucleotidase, mitochondrial	AY061970|Nt5m|103850|5',3'-nucleotidase, mitochondrial
mm9_v1_chr6_+_86388364_86388435	0.307395	CRX.p2	AK047127|C87436|232196|expressed sequence C87436	NM_146170|C87436|232196|expressed sequence C87436	AK170524|C87436|232196|expressed sequence C87436	AK171511|C87436|232196|expressed sequence C87436	BC025632|C87436|232196|expressed sequence C87436
mm9_v1_chr14_+_63752151_63752250	0.302256	CRX.p2	M14222|Ctsb|13030|cathepsin B	AK190209|Ctsb|13030|cathepsin B	AK190539|Ctsb|13030|cathepsin B	AK191055|Ctsb|13030|cathepsin B	AK191391|Ctsb|13030|cathepsin B	AK196955|Ctsb|13030|cathepsin B	AK198213|Ctsb|13030|cathepsin B	AK199268|Ctsb|13030|cathepsin B	AK201893|Ctsb|13030|cathepsin B	AK202291|Ctsb|13030|cathepsin B	AK203639|Ctsb|13030|cathepsin B
mm9_v1_chr1_+_43787442_43787446	0.301443	CRX.p2	AK049805|1500015O10Rik|78896|RIKEN cDNA 1500015O10 gene	NM_024283|1500015O10Rik|78896|RIKEN cDNA 1500015O10 gene
mm9_v1_chr11_-_70501430_70501474	0.300667	CRX.p2	AK039670|Camta2|216874|calmodulin binding transcription activator 2	BC049133|Camta2|216874|calmodulin binding transcription activator 2	BC056395|Camta2|216874|calmodulin binding transcription activator 2	AK169118|Camta2|216874|calmodulin binding transcription activator 2	AK150186|Camta2|216874|calmodulin binding transcription activator 2
mm9_v1_chr3_+_95238406_95238462	0.298347	CRX.p2	AK141362|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	U10325|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	U14333|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chrX_-_73120447_73120456	0.297268	CRX.p2	AK160501|Pls3|102866|plastin 3 (T-isoform)
mm9_v1_chr10_+_80614066_80614217	0.296852	CRX.p2	AK018596|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr18_+_40416615_40416659	0.292705	CRX.p2	AK013700|2900055J20Rik|73001|RIKEN cDNA 2900055J20 gene
mm9_v1_chr11_+_68316520_68316601	0.291473	CRX.p2	NM_001004435|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	NM_001081566|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK169948|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK036623|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	BC028998|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK171063|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK151178|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK153039|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6
mm9_v1_chr11_-_69575192_69575469	0.291175	CRX.p2	AF016712|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137893|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137894|Amac1|56293|acyl-malonyl condensing enzyme 1	NM_019871|Amac1|56293|acyl-malonyl condensing enzyme 1	AK077181|Amac1|56293|acyl-malonyl condensing enzyme 1
mm9_v1_chr3_+_129581477_129581610	0.290407	CRX.p2	BC051117|Pla2g12a|66350|phospholipase A2, group XIIA	AK010011|Pla2g12a|66350|phospholipase A2, group XIIA	NM_023196|Pla2g12a|66350|phospholipase A2, group XIIA	AY007381|Pla2g12a|66350|phospholipase A2, group XIIA	AK010174|Pla2g12a|66350|phospholipase A2, group XIIA	BC026812|Pla2g12a|66350|phospholipase A2, group XIIA	AK003183|Pla2g12a|66350|phospholipase A2, group XIIA	AK012414|Pla2g12a|66350|phospholipase A2, group XIIA	AK163693|Pla2g12a|66350|phospholipase A2, group XIIA
mm9_v1_chr2_-_5816381_5816442	0.290351	CRX.p2	AK160602|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK077701|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	NM_021305|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr2_+_155833791_155833870	0.283527	CRX.p2	BC057130|Ergic3|66366|ERGIC and golgi 3	AK050285|Ergic3|66366|ERGIC and golgi 3	BC043720|Ergic3|66366|ERGIC and golgi 3	AK009350|Ergic3|66366|ERGIC and golgi 3	AK013942|Ergic3|66366|ERGIC and golgi 3	NM_025516|Ergic3|66366|ERGIC and golgi 3
mm9_v1_chr1_-_89291303_89291307	0.283476	CRX.p2	NM_001110227|Kcnj13|100040591|potassium inwardly-rectifying channel, subfamily J, member 13
mm9_v1_chr3_-_53461276_53461276	0.282701	CRX.p2	AB236662|Frem2|242022|Fras1 related extracellular matrix protein 2	NM_172862|Frem2|242022|Fras1 related extracellular matrix protein 2
mm9_v1_chr11_+_61770311_61770311	0.281349	CRX.p2	AK032662|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1
mm9_v1_chr2_+_181414995_181415018	0.280371	CRX.p2	D86081|Tcea2|21400|transcription elongation factor A (SII), 2	NM_009326|Tcea2|21400|transcription elongation factor A (SII), 2	AK131650|Tcea2|21400|transcription elongation factor A (SII), 2
mm9_v1_chr16_-_18426446_18426681	0.279999	CRX.p2	AK148311|Comt|12846|catechol-O-methyltransferase	BC010402|Comt|12846|catechol-O-methyltransferase	AF076156|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr5_-_90652986_90653036	0.274058	CRX.p2	AK156053|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC138972|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145479|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145486|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145728|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001033310|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001163456|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr14_+_8650470_8650537	0.273797	CRX.p2	NM_134080|Flnb|286940|filamin, beta	AK047011|Flnb|286940|filamin, beta
mm9_v1_chr11_+_54911540_54911679	0.273403	CRX.p2	AK149642|Gm2a|14667|GM2 ganglioside activator protein	AK152256|Gm2a|14667|GM2 ganglioside activator protein	U09816|Gm2a|14667|GM2 ganglioside activator protein	BC004651|Gm2a|14667|GM2 ganglioside activator protein	NM_010299|Gm2a|14667|GM2 ganglioside activator protein	L19526|Gm2a|14667|GM2 ganglioside activator protein	CT010289|Gm2a|14667|GM2 ganglioside activator protein	AK179394|Gm2a|14667|GM2 ganglioside activator protein	AK181597|Gm2a|14667|GM2 ganglioside activator protein
mm9_v1_chr6_+_52663700_52663811	0.27281	CRX.p2	NM_025816|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK004574|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK146076|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK171136|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC014798|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1
mm9_v1_chr4_-_118162354_118162375	0.268615	CRX.p2	X71425|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X73960|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC057004|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC060182|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK052192|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK161898|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC046452|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr10_+_69667423_69667431	0.268566	CRX.p2	AK009351|2310015B20Rik|69563|RIKEN cDNA 2310015B20 gene
mm9_v1_chrM_+_14143_14189	0.268222	CRX.p2	
mm9_v1_chr2_+_180701948_180701963	0.26809	CRX.p2	AK168007|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK168602|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr9_-_108499855_108499944	0.265962	CRX.p2	AK016685|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK161992|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK038927|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK047714|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	BC111871|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	NM_028944|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	AK046783|P4htm|74443|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
mm9_v1_chrX_+_149574541_149574624	0.265244	CRX.p2	BC069180|Rragb|245670|Ras-related GTP binding B
mm9_v1_chr13_-_97968221_97968343	0.264854	CRX.p2	Y00964|Hexb|15212|hexosaminidase B	AK151149|Hexb|15212|hexosaminidase B	AK159134|Hexb|15212|hexosaminidase B	AK160560|Hexb|15212|hexosaminidase B	AK159178|Hexb|15212|hexosaminidase B	U07633|Hexb|15212|hexosaminidase B	AK168825|Hexb|15212|hexosaminidase B	NM_010422|Hexb|15212|hexosaminidase B
mm9_v1_chr2_-_113057218_113057234	0.264816	CRX.p2	AK082701|Ryr3|20192|ryanodine receptor 3	D84237|Ryr3|20192|ryanodine receptor 3
mm9_v1_chr1_-_82232392_82232507	0.263891	CRX.p2	AK141842|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr9_-_58097422_58097566	0.261537	CRX.p2	AK193824|Pml|18854|promyelocytic leukemia	AK156054|Pml|18854|promyelocytic leukemia	AK157346|Pml|18854|promyelocytic leukemia	AK156279|Pml|18854|promyelocytic leukemia	U33626|Pml|18854|promyelocytic leukemia	AK156175|Pml|18854|promyelocytic leukemia	BC020990|Pml|18854|promyelocytic leukemia	AK137538|Pml|18854|promyelocytic leukemia	AK157035|Pml|18854|promyelocytic leukemia
mm9_v1_chr15_-_93426312_93426402	0.25998	CRX.p2	AK153711|Prickle1|106042|prickle homolog 1 (Drosophila)	NM_001033217|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr14_+_22569752_22569797	0.259769	CRX.p2	AK006211|Samd8|67630|sterile alpha motif domain containing 8	NM_026283|Samd8|67630|sterile alpha motif domain containing 8	BC116745|Samd8|67630|sterile alpha motif domain containing 8	BC116747|Samd8|67630|sterile alpha motif domain containing 8	AK015593|Samd8|67630|sterile alpha motif domain containing 8	BC100476|Samd8|67630|sterile alpha motif domain containing 8
mm9_v1_chr14_+_56179739_56179780	0.259122	CRX.p2	NM_001199009|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK150183|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr1_+_169238780_169238800	0.25861	CRX.p2	AK004504|Tmco1|68944|transmembrane and coiled-coil domains 1	NM_001039483|Tmco1|68944|transmembrane and coiled-coil domains 1
mm9_v1_chr17_+_21672490_21672637	0.257865	CRX.p2	AK032299|Zfp52|22710|zinc finger protein 52	NM_144515|Zfp52|22710|zinc finger protein 52	BC021527|Zfp52|22710|zinc finger protein 52
mm9_v1_chr2_+_181415021_181415025	0.257385	CRX.p2	BC049617|Tcea2|21400|transcription elongation factor A (SII), 2	BC065786|Tcea2|21400|transcription elongation factor A (SII), 2	BC138504|Tcea2|21400|transcription elongation factor A (SII), 2	BC138505|Tcea2|21400|transcription elongation factor A (SII), 2
mm9_v1_chr4_+_99768482_99768534	0.257164	CRX.p2	AK046699|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1
mm9_v1_chr1_-_164790057_164790069	0.255945	CRX.p2	AK143940|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr1_+_36568707_36568722	0.255711	CRX.p2	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr7_+_82846863_82846922	0.255237	CRX.p2	AK133803|Akap13|75547|A kinase (PRKA) anchor protein 13	AK037815|Akap13|75547|A kinase (PRKA) anchor protein 13
mm9_v1_chr7_-_107805365_107805449	0.254045	CRX.p2	AK141634|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chr11_-_54769601_54769632	0.253571	CRX.p2	AK135338|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr3_+_51028796_51028896	0.253034	CRX.p2	AK084516|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AK041713|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AF199491|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)
mm9_v1_chr8_+_97056910_97056982	0.251216	CRX.p2	BC031801|Cpne2|234577|copine II	NM_153507|Cpne2|234577|copine II	AK160238|Cpne2|234577|copine II	AK086165|Cpne2|234577|copine II	BC022128|Cpne2|234577|copine II
mm9_v1_chr8_-_98377390_98377440	0.248766	CRX.p2	AK052548|Slc38a7|234595|solute carrier family 38, member 7	NM_172758|Slc38a7|234595|solute carrier family 38, member 7	AK195271|Slc38a7|234595|solute carrier family 38, member 7	AK171137|Slc38a7|234595|solute carrier family 38, member 7
mm9_v1_chr2_-_34817068_34817291	0.247976	CRX.p2	AK169515|Traf1|22029|TNF receptor-associated factor 1	AK089281|Traf1|22029|TNF receptor-associated factor 1	L35302|Traf1|22029|TNF receptor-associated factor 1	AK142931|Traf1|22029|TNF receptor-associated factor 1	AK029135|Traf1|22029|TNF receptor-associated factor 1	NM_009421|Traf1|22029|TNF receptor-associated factor 1
mm9_v1_chr8_+_87583954_87584056	0.247687	CRX.p2	AK156709|Fbxw9|68628|F-box and WD-40 domain protein 9	NM_026791|Fbxw9|68628|F-box and WD-40 domain protein 9	BC043658|Fbxw9|68628|F-box and WD-40 domain protein 9
mm9_v1_chr3_+_55265811_55265928	0.246605	CRX.p2	AF155821|Dclk1|13175|doublecortin-like kinase 1	AK032424|Dclk1|13175|doublecortin-like kinase 1	AK081200|Dclk1|13175|doublecortin-like kinase 1	AB073969|Dclk1|13175|doublecortin-like kinase 1	AK047716|Dclk1|13175|doublecortin-like kinase 1	AY968047|Dclk1|13175|doublecortin-like kinase 1	AY968048|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chrX_-_75829120_75829237	0.245777	CRX.p2	BC032926|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	NM_001164275|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK008151|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK083396|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK135895|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK161802|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	NM_027322|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1
mm9_v1_chr15_-_82210591_82210704	0.245554	CRX.p2	BC016256|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	AK086555|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	BC006853|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	NM_001163472|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	NM_019823|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22
mm9_v1_chrM_+_6139_6178	0.245057	CRX.p2	
mm9_v1_chr11_-_115992196_115992441	0.242248	CRX.p2	BC118954|Trim65|338364|tripartite motif-containing 65	BC118955|Trim65|338364|tripartite motif-containing 65	AK028857|Trim65|338364|tripartite motif-containing 65	BC057094|Trim65|338364|tripartite motif-containing 65	AK050080|Trim65|338364|tripartite motif-containing 65	AK047439|Trim65|338364|tripartite motif-containing 65	AK079982|Trim65|338364|tripartite motif-containing 65	NM_178802|Trim65|338364|tripartite motif-containing 65
mm9_v1_chr5_+_116009516_116009532	0.241807	CRX.p2	AK012606|Rplp0|11837|ribosomal protein, large, P0	AK029816|Rplp0|11837|ribosomal protein, large, P0	AK161683|Rplp0|11837|ribosomal protein, large, P0	BC087887|Rplp0|11837|ribosomal protein, large, P0	BC089496|Rplp0|11837|ribosomal protein, large, P0	AK081678|Rplp0|11837|ribosomal protein, large, P0	AK002315|Rplp0|11837|ribosomal protein, large, P0	AK009767|Rplp0|11837|ribosomal protein, large, P0	AK010267|Rplp0|11837|ribosomal protein, large, P0	AK150448|Rplp0|11837|ribosomal protein, large, P0	AK159358|Rplp0|11837|ribosomal protein, large, P0	AK160541|Rplp0|11837|ribosomal protein, large, P0	AK166728|Rplp0|11837|ribosomal protein, large, P0	X15267|Rplp0|11837|ribosomal protein, large, P0	AK167240|Rplp0|11837|ribosomal protein, large, P0	BC003833|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr11_+_100277007_100277076	0.241592	CRX.p2	NM_001163481|Fkbp10|14230|FK506 binding protein 10	NM_010221|Fkbp10|14230|FK506 binding protein 10	L07063|Fkbp10|14230|FK506 binding protein 10	AK144185|Fkbp10|14230|FK506 binding protein 10	BC029546|Fkbp10|14230|FK506 binding protein 10	AK019446|Fkbp10|14230|FK506 binding protein 10
mm9_v1_chr2_-_131000485_131000584	0.24107	CRX.p2	BC006046|Spef1|70997|sperm flagellar 1	AK047675|Spef1|70997|sperm flagellar 1	NM_027641|Spef1|70997|sperm flagellar 1	AY860964|Spef1|70997|sperm flagellar 1	AK016476|Spef1|70997|sperm flagellar 1
mm9_v1_chr6_+_90500848_90500852	0.240779	CRX.p2	BC030723|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1
mm9_v1_chr5_+_32780438_32780530	0.240327	CRX.p2	AK198041|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK202060|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK217081|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK214320|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr4_+_8462756_8462764	0.237548	CRX.p2	AK150030|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr7_+_29573191_29573292	0.237424	CRX.p2	AK200274|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)
mm9_v1_chr11_+_119961534_119961626	0.236254	CRX.p2	
mm9_v1_chr1_-_173152634_173152646	0.233044	CRX.p2	AK028388|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)	NM_001037170|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)
mm9_v1_chr3_+_90318850_90318869	0.231256	CRX.p2	AK002755|S100a13|20196|S100 calcium binding protein A13	AK008895|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr7_-_87469309_87469339	0.230796	CRX.p2	AK030872|Rccd1|269955|RCC1 domain containing 1	BC069844|Rccd1|269955|RCC1 domain containing 1	AK088482|Rccd1|269955|RCC1 domain containing 1	NM_173445|Rccd1|269955|RCC1 domain containing 1
mm9_v1_chr4_+_126290825_126290854	0.230176	CRX.p2	
mm9_v1_chr5_+_36235967_36236084	0.230014	CRX.p2	BC050814|Afap1|70292|actin filament associated protein 1	NM_027373|Afap1|70292|actin filament associated protein 1	AK161385|Afap1|70292|actin filament associated protein 1	AK080756|Afap1|70292|actin filament associated protein 1	AK129483|Afap1|70292|actin filament associated protein 1	AK147706|Afap1|70292|actin filament associated protein 1
mm9_v1_chr12_+_72149332_72149349	0.229988	CRX.p2	AK149171|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr15_-_66801198_66801204	0.22943	CRX.p2	AK170439|Ndrg1|17988|N-myc downstream regulated gene 1	AK004548|Ndrg1|17988|N-myc downstream regulated gene 1	AK098075|Ndrg1|17988|N-myc downstream regulated gene 1	AK161860|Ndrg1|17988|N-myc downstream regulated gene 1	AK165007|Ndrg1|17988|N-myc downstream regulated gene 1	AK170281|Ndrg1|17988|N-myc downstream regulated gene 1	AK170636|Ndrg1|17988|N-myc downstream regulated gene 1	U60593|Ndrg1|17988|N-myc downstream regulated gene 1	AK170809|Ndrg1|17988|N-myc downstream regulated gene 1	NM_008681|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr13_+_49600158_49600323	0.22918	CRX.p2	AK040995|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC089559|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	NM_001012324|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK134746|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK163501|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC056468|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC065151|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK038812|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific
mm9_v1_chr8_+_125597668_125597810	0.227803	CRX.p2	AK184026|Spg7|234847|spastic paraplegia 7 homolog (human)
mm9_v1_chr12_-_73509537_73509656	0.227646	CRX.p2	AB074899|Rtn1|104001|reticulon 1	CT010392|Rtn1|104001|reticulon 1	BC030455|Rtn1|104001|reticulon 1
mm9_v1_chr17_-_34253887_34254086	0.226804	CRX.p2	AK179882|Brd2|14312|bromodomain containing 2	AK205877|Brd2|14312|bromodomain containing 2	AK218127|Brd2|14312|bromodomain containing 2	AB212273|Brd2|14312|bromodomain containing 2	AB010248|Brd2|14312|bromodomain containing 2
mm9_v1_chr12_+_17697604_17697620	0.226675	CRX.p2	NM_016677|Hpcal1|53602|hippocalcin-like 1
mm9_v1_chr11_+_102977638_102977680	0.225507	CRX.p2	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr1_-_173537404_173537546	0.224	CRX.p2	M84412|Ly9|17085|lymphocyte antigen 9	BC055380|Ly9|17085|lymphocyte antigen 9	BC066212|Ly9|17085|lymphocyte antigen 9	AB196804|Ly9|17085|lymphocyte antigen 9	AB196805|Ly9|17085|lymphocyte antigen 9	AB196806|Ly9|17085|lymphocyte antigen 9	AB196807|Ly9|17085|lymphocyte antigen 9	AK087345|Ly9|17085|lymphocyte antigen 9	BC095921|Ly9|17085|lymphocyte antigen 9	AK134106|Ly9|17085|lymphocyte antigen 9	AK150121|Ly9|17085|lymphocyte antigen 9	AK042288|Ly9|17085|lymphocyte antigen 9	AK088815|Ly9|17085|lymphocyte antigen 9	AK040306|Ly9|17085|lymphocyte antigen 9	NM_008534|Ly9|17085|lymphocyte antigen 9	AF244130|Ly9|17085|lymphocyte antigen 9	AF244131|Ly9|17085|lymphocyte antigen 9
mm9_v1_chr6_-_124861656_124861722	0.221819	CRX.p2	BC120591|Lag3|16768|lymphocyte-activation gene 3	NM_008479|Lag3|16768|lymphocyte-activation gene 3	X98113|Lag3|16768|lymphocyte-activation gene 3
mm9_v1_chr3_+_67696141_67696177	0.221348	CRX.p2	AK052136|Iqcj|208426|IQ motif containing J	NM_001113419|Iqcj-schip1|100505386|IQ motif containing J-schwannomin interacting protein 1 read-through transcript	NM_177585|Iqcj|208426|IQ motif containing J	BC107305|Iqcj|208426|IQ motif containing J	BC107306|Iqcj|208426|IQ motif containing J
mm9_v1_chr11_-_64976408_64976473	0.21799	CRX.p2	BC056366|Arhgap44|216831|Rho GTPase activating protein 44	BC059911|Arhgap44|216831|Rho GTPase activating protein 44	NM_001099288|Arhgap44|216831|Rho GTPase activating protein 44	NM_175003|Arhgap44|216831|Rho GTPase activating protein 44
mm9_v1_chr17_-_48571942_48571962	0.216494	CRX.p2	AK009047|Apobec2|11811|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2	BC027530|Apobec2|11811|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm9_v1_chr10_+_41170163_41170242	0.214772	CRX.p2	AK146986|Zbtb24|268294|zinc finger and BTB domain containing 24	AK154467|Zbtb24|268294|zinc finger and BTB domain containing 24	AY210402|Zbtb24|268294|zinc finger and BTB domain containing 24	BC050933|Zbtb24|268294|zinc finger and BTB domain containing 24	NM_153398|Zbtb24|268294|zinc finger and BTB domain containing 24	AK054097|Zbtb24|268294|zinc finger and BTB domain containing 24	AK169260|Zbtb24|268294|zinc finger and BTB domain containing 24	BC055367|Zbtb24|268294|zinc finger and BTB domain containing 24	AF263010|Zbtb24|268294|zinc finger and BTB domain containing 24
mm9_v1_chr19_+_5023859_5024113	0.212827	CRX.p2	BC048958|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2	NM_007854|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2	AK010950|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2	AK154310|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2	AF183397|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2	AK083484|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2	AK144451|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2
mm9_v1_chr11_+_117643610_117643698	0.2126	CRX.p2	NM_001195089|Tmc8|217356|transmembrane channel-like gene family 8	NM_001195090|Tmc8|217356|transmembrane channel-like gene family 8	NM_181856|Tmc8|217356|transmembrane channel-like gene family 8	AK171772|Tmc8|217356|transmembrane channel-like gene family 8	AK156764|Tmc8|217356|transmembrane channel-like gene family 8	AY236501|Tmc8|217356|transmembrane channel-like gene family 8
mm9_v1_chr11_+_58120557_58120580	0.212246	CRX.p2	AK170229|Zfp692|103836|zinc finger protein 692	AK080545|Zfp692|103836|zinc finger protein 692	NM_001040686|Zfp692|103836|zinc finger protein 692	NM_182996|Zfp692|103836|zinc finger protein 692
mm9_v1_chr2_-_30214724_30214844	0.209287	CRX.p2	AF426314|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC024477|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	NM_139302|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK155248|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152409|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152502|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	EF676083|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK167762|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC028859|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2
mm9_v1_chr4_-_135543058_135543193	0.209091	CRX.p2	BC052695|1110049F12Rik|66193|RIKEN cDNA 1110049F12 gene	AF400670|1110049F12Rik|66193|RIKEN cDNA 1110049F12 gene	AK050261|1110049F12Rik|66193|RIKEN cDNA 1110049F12 gene	NM_025411|1110049F12Rik|66193|RIKEN cDNA 1110049F12 gene	AK004208|1110049F12Rik|66193|RIKEN cDNA 1110049F12 gene
mm9_v1_chr12_+_82732188_82732357	0.208557	CRX.p2	AK172918|Ttc9|69480|tetratricopeptide repeat domain 9	BC028891|Ttc9|69480|tetratricopeptide repeat domain 9	AK133456|Ttc9|69480|tetratricopeptide repeat domain 9	NM_001033149|Ttc9|69480|tetratricopeptide repeat domain 9	BC139242|Ttc9|69480|tetratricopeptide repeat domain 9	BC139244|Ttc9|69480|tetratricopeptide repeat domain 9
mm9_v1_chr5_+_118426792_118426794	0.208485	CRX.p2	AB093270|Fbxo21|231670|F-box protein 21
mm9_v1_chr12_+_17697684_17697832	0.208101	CRX.p2	
mm9_v1_chr11_+_67399999_67400271	0.207109	CRX.p2	AK031455|Gas7|14457|growth arrest specific 7	NM_001109657|Gas7|14457|growth arrest specific 7	AK154463|Gas7|14457|growth arrest specific 7	AK017394|Gas7|14457|growth arrest specific 7
mm9_v1_chr9_-_56533004_56533059	0.206929	CRX.p2	BC065696|Lingo1|235402|leucine rich repeat and Ig domain containing 1	BC052384|Lingo1|235402|leucine rich repeat and Ig domain containing 1	NM_181074|Lingo1|235402|leucine rich repeat and Ig domain containing 1
mm9_v1_chr16_+_18836666_18836685	0.206794	CRX.p2	AK160192|2510002D24Rik|72307|RIKEN cDNA 2510002D24 gene	NM_001033164|2510002D24Rik|72307|RIKEN cDNA 2510002D24 gene	AK010889|2510002D24Rik|72307|RIKEN cDNA 2510002D24 gene	AK153794|2510002D24Rik|72307|RIKEN cDNA 2510002D24 gene
mm9_v1_chr4_-_135050358_135050475	0.205541	CRX.p2	BC057168|Nipal3|74552|NIPA-like domain containing 3	AK018640|Nipal3|74552|NIPA-like domain containing 3	AK138843|Nipal3|74552|NIPA-like domain containing 3	NM_028995|Nipal3|74552|NIPA-like domain containing 3	AK053937|Nipal3|74552|NIPA-like domain containing 3	AK082376|Nipal3|74552|NIPA-like domain containing 3	AK087811|Nipal3|74552|NIPA-like domain containing 3	AK148206|Nipal3|74552|NIPA-like domain containing 3	AK049696|Nipal3|74552|NIPA-like domain containing 3
mm9_v1_chr9_+_109954534_109954609	0.204315	CRX.p2	AK138416|Mtap4|17758|microtubule-associated protein 4	AK146790|Mtap4|17758|microtubule-associated protein 4	BC042645|Mtap4|17758|microtubule-associated protein 4	AK134996|Mtap4|17758|microtubule-associated protein 4
mm9_v1_chr17_-_57199014_57199114	0.204059	CRX.p2	AK206310|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AK158821|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr12_+_83717883_83718024	0.20215	CRX.p2	AK139323|Rgs6|50779|regulator of G-protein signaling 6	AK052527|Rgs6|50779|regulator of G-protein signaling 6	NM_015812|Rgs6|50779|regulator of G-protein signaling 6
mm9_v1_chr1_+_176066876_176066876	0.201686	CRX.p2	BC104096|Olfr424|258716|olfactory receptor 424	BC104097|Olfr424|258716|olfactory receptor 424	NM_146721|Olfr424|258716|olfactory receptor 424
mm9_v1_chrX_+_132806184_132806337	0.200052	CRX.p2	L10905|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr7_-_117509277_117509385	0.19973	CRX.p2	BC015069|Sbf2|319934|SET binding factor 2
mm9_v1_chr2_-_148701203_148701269	0.199708	CRX.p2	AK002438|Cst3|13010|cystatin C	NM_009976|Cst3|13010|cystatin C	AK014368|Cst3|13010|cystatin C	AK131728|Cst3|13010|cystatin C	AK146333|Cst3|13010|cystatin C
mm9_v1_chr9_+_40494076_40494232	0.199581	CRX.p2	AK028983|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene	AK080481|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene	AB040490|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene	BC026447|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chrX_-_147451785_147451868	0.198844	CRX.p2	BC079653|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	BC057033|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	BC020354|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	NM_001168600|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	NM_198110|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like
mm9_v1_chr1_-_196957466_196957592	0.197633	CRX.p2	M23446|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC092048|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC028945|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK134226|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr6_+_113342490_113342490	0.196285	CRX.p2	AM690746|Ttll3|101100|tubulin tyrosine ligase-like family, member 3	NM_133923|Ttll3|101100|tubulin tyrosine ligase-like family, member 3
mm9_v1_chr5_-_138052555_138052672	0.195566	CRX.p2	AB008548|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK142615|Pcolce|18542|procollagen C-endopeptidase enhancer protein	X57337|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK159430|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK159940|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK144392|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK146829|Pcolce|18542|procollagen C-endopeptidase enhancer protein	NM_008788|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK162524|Pcolce|18542|procollagen C-endopeptidase enhancer protein
mm9_v1_chr4_+_132776723_132776800	0.194423	CRX.p2	NM_027152|Cd164l2|69655|CD164 sialomucin-like 2	AK139809|Cd164l2|69655|CD164 sialomucin-like 2	AK009888|Cd164l2|69655|CD164 sialomucin-like 2	BC111824|Cd164l2|69655|CD164 sialomucin-like 2
mm9_v1_chr17_+_26792031_26792503	0.193421	CRX.p2	AK010290|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr2_-_163470870_163470922	0.193331	CRX.p2	NM_012032|Serinc3|26943|serine incorporator 3
mm9_v1_chr7_+_117161753_117161793	0.193316	CRX.p2	AK039534|Ipo7|233726|importin 7	AK053498|Ipo7|233726|importin 7
mm9_v1_chr8_-_63433528_63433596	0.192266	CRX.p2	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr11_+_78075242_78075302	0.192041	CRX.p2	AK150829|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	NM_001002004|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC080706|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	AK149719|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC075633|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC019798|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene
mm9_v1_chr12_-_70299271_70299415	0.191891	CRX.p2	AB455811|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	BC055807|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	BC062898|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	NM_027269|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene
mm9_v1_chr16_-_85120798_85120921	0.19035	CRX.p2	AK194233|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr9_-_42072373_42072382	0.189864	CRX.p2	NM_172769|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm9_v1_chr14_-_104215770_104216122	0.189545	CRX.p2	AK202768|Ednrb|13618|endothelin receptor type B	AK191663|Ednrb|13618|endothelin receptor type B	AK203096|Ednrb|13618|endothelin receptor type B	AK215811|Ednrb|13618|endothelin receptor type B
mm9_v1_chr7_-_107663293_107663468	0.188283	CRX.p2	AK139680|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	BC048501|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	NM_153527|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	AF419292|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13
mm9_v1_chr7_+_17659388_17659431	0.187601	CRX.p2	BC030357|Psg16|26436|pregnancy specific glycoprotein 16	NM_007676|Psg16|26436|pregnancy specific glycoprotein 16	U34272|Psg16|26436|pregnancy specific glycoprotein 16
mm9_v1_chr11_-_90548862_90548939	0.187591	CRX.p2	AK181527|Tom1l1|71943|target of myb1-like 1 (chicken)	AJ505007|Tom1l1|71943|target of myb1-like 1 (chicken)	AK009826|Tom1l1|71943|target of myb1-like 1 (chicken)	AK083630|Tom1l1|71943|target of myb1-like 1 (chicken)	AF395837|Tom1l1|71943|target of myb1-like 1 (chicken)	AK033712|Tom1l1|71943|target of myb1-like 1 (chicken)	NM_028011|Tom1l1|71943|target of myb1-like 1 (chicken)
mm9_v1_chr9_-_36551018_36551139	0.185486	CRX.p2	AK213353|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr18_+_37454493_37454629	0.185135	CRX.p2	NM_053127|Pcdhb2|93873|protocadherin beta 2	BC021789|Pcdhb2|93873|protocadherin beta 2	BC141154|Pcdhb2|93873|protocadherin beta 2	AY013781|Pcdhb2|93873|protocadherin beta 2
mm9_v1_chr18_+_35000283_35000409	0.185023	CRX.p2	BC020184|Reep2|225362|receptor accessory protein 2	NM_144865|Reep2|225362|receptor accessory protein 2	AK147333|Reep2|225362|receptor accessory protein 2	AY562230|Reep2|225362|receptor accessory protein 2	EU555417|Reep2|225362|receptor accessory protein 2
mm9_v1_chr2_+_14151018_14151088	0.18425	CRX.p2	NM_008625|Mrc1|17533|mannose receptor, C type 1	Z11974|Mrc1|17533|mannose receptor, C type 1	BC141338|Mrc1|17533|mannose receptor, C type 1
mm9_v1_chr5_-_118694869_118695124	0.183893	CRX.p2	AK046850|Rnft2|269695|ring finger protein, transmembrane 2	NM_172998|Rnft2|269695|ring finger protein, transmembrane 2	BC057302|Rnft2|269695|ring finger protein, transmembrane 2	AK148930|Rnft2|269695|ring finger protein, transmembrane 2	NM_001109902|Rnft2|269695|ring finger protein, transmembrane 2	AK090256|Rnft2|269695|ring finger protein, transmembrane 2
mm9_v1_chr10_+_59764990_59765134	0.183417	CRX.p2	AK179432|Psap|19156|prosaposin	AK202324|Psap|19156|prosaposin	AK202355|Psap|19156|prosaposin
mm9_v1_chrX_+_165758315_165758353	0.181643	CRX.p2	AK051847|Gm15246|100040950|predicted gene 15246
mm9_v1_chr19_+_8667671_8667730	0.181505	CRX.p2	NM_001164635|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AK157891|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	BC014762|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AK044336|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8	AF078869|Slc22a8|19879|solute carrier family 22 (organic anion transporter), member 8
mm9_v1_chr7_+_29551728_29551875	0.180259	CRX.p2	NM_001122765|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)	NM_001122766|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)	NM_022432|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)	AF299337|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)	AK146412|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)	AK014042|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)	AK193014|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)	AB221570|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)	AK144431|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)
mm9_v1_chr19_+_20567199_20567280	0.179495	CRX.p2	AK087651|E030003E18Rik|320092|RIKEN cDNA E030003E18 gene	AK086826|E030003E18Rik|320092|RIKEN cDNA E030003E18 gene	AK018993|E030003E18Rik|320092|RIKEN cDNA E030003E18 gene
mm9_v1_chr11_-_100579201_100579275	0.178497	CRX.p2	
mm9_v1_chr1_-_58480910_58480931	0.178283	CRX.p2	NM_001042634|Clk1|12747|CDC-like kinase 1
mm9_v1_chr10_-_42893894_42894226	0.1775	CRX.p2	DQ157775|Sobp|109205|sine oculis-binding protein homolog (Drosophila)	BC057055|Sobp|109205|sine oculis-binding protein homolog (Drosophila)
mm9_v1_chr5_-_124875921_124875965	0.177269	CRX.p2	NM_001081203|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK077133|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK165852|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)
mm9_v1_chr6_-_7643156_7643286	0.177238	CRX.p2	AK167933|Asns|27053|asparagine synthetase	AK167524|Asns|27053|asparagine synthetase	BC005552|Asns|27053|asparagine synthetase	NM_012055|Asns|27053|asparagine synthetase	U38940|Asns|27053|asparagine synthetase	AK160459|Asns|27053|asparagine synthetase	AK076207|Asns|27053|asparagine synthetase
mm9_v1_chr7_+_101191200_101191360	0.176986	CRX.p2	
mm9_v1_chr3_-_108248113_108248159	0.176851	CRX.p2	AK028154|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK153158|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK152150|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr2_-_120557235_120557264	0.176325	CRX.p2	BC117555|Cdan1|68968|congenital dyserythropoietic anemia, type I (human)	AK157271|Cdan1|68968|congenital dyserythropoietic anemia, type I (human)	NM_026891|Cdan1|68968|congenital dyserythropoietic anemia, type I (human)
mm9_v1_chr5_+_30768422_30768461	0.175586	CRX.p2	AK006710|1700001C02Rik|75434|RIKEN cDNA 1700001C02 gene	BC060996|1700001C02Rik|75434|RIKEN cDNA 1700001C02 gene	AK005574|1700001C02Rik|75434|RIKEN cDNA 1700001C02 gene	NM_029285|1700001C02Rik|75434|RIKEN cDNA 1700001C02 gene
mm9_v1_chr1_+_155756310_155756313	0.17491	CRX.p2	AK146463|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK158643|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK159888|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK152497|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)
mm9_v1_chr17_+_56812647_56812679	0.172672	CRX.p2	NM_027933|Ranbp3|71810|RAN binding protein 3
mm9_v1_chr18_-_84851298_84851466	0.172453	CRX.p2	AK131124|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK149751|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK152729|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK153040|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK152442|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK159129|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)
mm9_v1_chr19_-_4121544_4121574	0.172399	CRX.p2	AK146390|Aip|11632|aryl-hydrocarbon receptor-interacting protein
mm9_v1_chr4_+_137797490_137797591	0.171654	CRX.p2	
mm9_v1_chr11_+_119254380_119254384	0.170817	CRX.p2	AK037444|Rnf213|672511|ring finger protein 213
mm9_v1_chr3_-_88229007_88229060	0.170213	CRX.p2	BC052771|Slc25a44|229517|solute carrier family 25, member 44	AK166331|Slc25a44|229517|solute carrier family 25, member 44	AK169886|Slc25a44|229517|solute carrier family 25, member 44	AK044648|Slc25a44|229517|solute carrier family 25, member 44	AK046586|Slc25a44|229517|solute carrier family 25, member 44	AK079532|Slc25a44|229517|solute carrier family 25, member 44	AK165159|Slc25a44|229517|solute carrier family 25, member 44	AK083470|Slc25a44|229517|solute carrier family 25, member 44	AK083273|Slc25a44|229517|solute carrier family 25, member 44	AK144731|Slc25a44|229517|solute carrier family 25, member 44	AK166011|Slc25a44|229517|solute carrier family 25, member 44	AK168955|Slc25a44|229517|solute carrier family 25, member 44	AK032960|Slc25a44|229517|solute carrier family 25, member 44	AK134914|Slc25a44|229517|solute carrier family 25, member 44	NM_001145876|Slc25a44|229517|solute carrier family 25, member 44	NM_001145877|Slc25a44|229517|solute carrier family 25, member 44	NM_178696|Slc25a44|229517|solute carrier family 25, member 44
mm9_v1_chr11_+_54128404_54128494	0.170043	CRX.p2	NM_001033599|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY786360|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY786362|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK032479|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK039380|Acsl6|216739|acyl-CoA synthetase long-chain family member 6
mm9_v1_chr11_-_120479112_120479215	0.169295	CRX.p2	AK144379|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	BC003473|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	BC008276|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	NM_024229|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine
mm9_v1_chr10_+_77059995_77060080	0.166964	CRX.p2	AK198698|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK190248|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein
mm9_v1_chrX_+_20037652_20037652	0.165886	CRX.p2	BC130270|Phf16|382207|PHD finger protein 16	NM_199317|Phf16|382207|PHD finger protein 16
mm9_v1_chr17_+_24806616_24806711	0.165543	CRX.p2	AK131127|Zfp598|213753|zinc finger protein 598	BC050859|Zfp598|213753|zinc finger protein 598	NM_183149|Zfp598|213753|zinc finger protein 598
mm9_v1_chr11_+_87569075_87569079	0.16463	CRX.p2	AK020764|A430104N18Rik|78591|RIKEN cDNA A430104N18 gene
mm9_v1_chr6_-_86475749_86475995	0.164553	CRX.p2	AK002433|Pcbp1|23983|poly(rC) binding protein 1	AF139894|Pcbp1|23983|poly(rC) binding protein 1
mm9_v1_chr5_+_139711487_139711530	0.1638	CRX.p2	AK203786|Sun1|77053|Sad1 and UNC84 domain containing 1
mm9_v1_chr5_-_28564412_28564412	0.163493	CRX.p2	AK035828|Cnpy1|269637|canopy 1 homolog (zebrafish)	NM_175651|Cnpy1|269637|canopy 1 homolog (zebrafish)
mm9_v1_chr1_-_39707919_39708026	0.161572	CRX.p2	BC116790|Creg2|263764|cellular repressor of E1A-stimulated genes 2	BC116792|Creg2|263764|cellular repressor of E1A-stimulated genes 2	AK044192|Creg2|263764|cellular repressor of E1A-stimulated genes 2	NM_170597|Creg2|263764|cellular repressor of E1A-stimulated genes 2
mm9_v1_chr4_+_128820458_128820467	0.161461	CRX.p2	AK137327|Fndc5|384061|fibronectin type III domain containing 5
mm9_v1_chr9_+_20692618_20692740	0.155744	CRX.p2	NM_145610|Ppan|235036|peter pan homolog (Drosophila)	BC014688|Ppan|235036|peter pan homolog (Drosophila)	AK085695|Ppan|235036|peter pan homolog (Drosophila)	AK039027|Ppan|235036|peter pan homolog (Drosophila)	AK172615|Ppan|235036|peter pan homolog (Drosophila)	AK171672|Ppan|235036|peter pan homolog (Drosophila)	BC059277|Ppan|235036|peter pan homolog (Drosophila)
mm9_v1_chr15_+_76210904_76210993	0.155675	CRX.p2	AK036810|Heatr7a|223658|HEAT repeat containing 7A	NM_175457|Heatr7a|223658|HEAT repeat containing 7A	AK170702|Heatr7a|223658|HEAT repeat containing 7A	AK090131|Heatr7a|223658|HEAT repeat containing 7A	AK147808|Heatr7a|223658|HEAT repeat containing 7A	AK147897|Heatr7a|223658|HEAT repeat containing 7A	AK038863|Heatr7a|223658|HEAT repeat containing 7A	AK052153|Heatr7a|223658|HEAT repeat containing 7A
mm9_v1_chr1_+_89991575_89991689	0.155199	CRX.p2	NM_201642|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK159496|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK128918|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK162317|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK165465|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK154973|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	BC141205|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	BC141206|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AY227199|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK144599|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK153157|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C
mm9_v1_chrX_-_7753020_7753088	0.155082	CRX.p2	AK166256|Tbc1d25|209815|TBC1 domain family, member 25	AK040932|Tbc1d25|209815|TBC1 domain family, member 25	BC060178|Tbc1d25|209815|TBC1 domain family, member 25
mm9_v1_chr10_-_92773579_92773713	0.154414	CRX.p2	AK052546|Elk3|13713|ELK3, member of ETS oncogene family	S82864|Elk3|13713|ELK3, member of ETS oncogene family	AK133847|Elk3|13713|ELK3, member of ETS oncogene family	BC053402|Elk3|13713|ELK3, member of ETS oncogene family	BC055735|Elk3|13713|ELK3, member of ETS oncogene family	AK088129|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr1_-_173152548_173152594	0.152747	CRX.p2	AK012264|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)
mm9_v1_chr1_+_174051888_174051985	0.150647	CRX.p2	
mm9_v1_chr17_-_35325354_35325410	0.150022	CRX.p2	U72643|Lst1|16988|leukocyte specific transcript 1	U72644|Lst1|16988|leukocyte specific transcript 1	AF000428|Lst1|16988|leukocyte specific transcript 1	BC086881|Lst1|16988|leukocyte specific transcript 1	M18187|Lst1|16988|leukocyte specific transcript 1	NM_010734|Lst1|16988|leukocyte specific transcript 1	AF000427|Lst1|16988|leukocyte specific transcript 1
mm9_v1_chr13_-_25361773_25361915	0.149762	CRX.p2	AK138191|Nrsn1|22360|neurensin 1	D83206|Nrsn1|22360|neurensin 1	AK160941|Nrsn1|22360|neurensin 1	NM_009513|Nrsn1|22360|neurensin 1
mm9_v1_chr18_-_56722155_56722190	0.149593	CRX.p2	AK189373|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr18_+_37607310_37607496	0.149465	CRX.p2	AK032156|Pcdhb14|93885|protocadherin beta 14	NM_053139|Pcdhb14|93885|protocadherin beta 14	AK008662|Pcdhb14|93885|protocadherin beta 14	BC059821|Pcdhb14|93885|protocadherin beta 14	AK083065|Pcdhb14|93885|protocadherin beta 14	AY013775|Pcdhb14|93885|protocadherin beta 14
mm9_v1_chr16_+_95923988_95924060	0.148884	CRX.p2	NM_011809|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK038348|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr9_-_117160916_117161040	0.14841	CRX.p2	BC117840|Rbms3|207181|RNA binding motif, single stranded interacting protein	BC117841|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chrX_+_71696434_71696477	0.148174	CRX.p2	AK042138|Ikbkg|16151|inhibitor of kappaB kinase gamma	BC026905|Ikbkg|16151|inhibitor of kappaB kinase gamma
mm9_v1_chr4_-_43023359_43023400	0.147403	CRX.p2	BC050890|Fancg|60534|Fanconi anemia, complementation group G
mm9_v1_chr11_-_84953442_84953491	0.146593	CRX.p2	AK170234|Usp32|237898|ubiquitin specific peptidase 32	AK148221|Usp32|237898|ubiquitin specific peptidase 32	NM_001029934|Usp32|237898|ubiquitin specific peptidase 32
mm9_v1_chr9_+_82723787_82723813	0.146128	CRX.p2	AJ242722|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr4_+_140924106_140924134	0.145092	CRX.p2	BC147048|Fam131c|277743|family with sequence similarity 131, member C	BC147049|Fam131c|277743|family with sequence similarity 131, member C	NM_001085513|Fam131c|277743|family with sequence similarity 131, member C
mm9_v1_chr6_-_86476031_86476054	0.144448	CRX.p2	BC004793|Pcbp1|23983|poly(rC) binding protein 1
mm9_v1_chr11_+_61770264_61770301	0.143878	CRX.p2	AK143663|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1	AK046469|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1
mm9_v1_chr9_-_119977358_119977413	0.143837	CRX.p2	BC012653|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK035902|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK140010|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AF102269|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	NM_009987|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK045634|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK137388|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK044557|Cx3cr1|13051|chemokine (C-X3-C) receptor 1
mm9_v1_chr13_-_60998747_60998807	0.143369	CRX.p2	AY034578|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	X15592|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	AK150917|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	NM_001145801|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	NM_007797|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta
mm9_v1_chr8_-_23916037_23916141	0.143242	CRX.p2	BC030484|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	BC027301|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK017991|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK134634|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK082988|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK080668|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK081220|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AY039763|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK077365|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_001122820|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_029505|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit
mm9_v1_chr1_-_135803531_135803749	0.141946	CRX.p2	AK053318|Optc|269120|opticin	BC099435|Optc|269120|opticin	BC115928|Optc|269120|opticin	AY077682|Optc|269120|opticin	AF333980|Optc|269120|opticin	NM_001160421|Optc|269120|opticin	NM_001160422|Optc|269120|opticin	NM_054076|Optc|269120|opticin
mm9_v1_chr18_+_78016286_78016338	0.141399	CRX.p2	AK157529|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK192613|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK196974|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK209959|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr19_-_29722826_29722925	0.141309	CRX.p2	AK129447|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC086627|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK137206|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK037287|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC151181|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC151182|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC157914|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK041066|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK050284|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	NM_001081213|Ermp1|226090|endoplasmic reticulum metallopeptidase 1
mm9_v1_chr2_+_152987036_152987075	0.140847	CRX.p2	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr14_+_13116681_13116761	0.14061	CRX.p2	NM_146051|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	NM_178141|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK076182|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC094456|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK089971|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC027421|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene
mm9_v1_chr7_-_147298872_147298960	0.140289	CRX.p2	BC057971|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK210204|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
mm9_v1_chr7_-_88092627_88092644	0.140113	CRX.p2	BC057885|Sec11a|56529|SEC11 homolog A (S. cerevisiae)
mm9_v1_chr1_+_180117815_180117840	0.139616	CRX.p2	AK146492|Pppde1|78825|PPPDE peptidase domain containing 1	BC046816|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr4_+_21801372_21801440	0.139547	CRX.p2	AK035634|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr10_-_128181069_128181164	0.139054	CRX.p2	BC006713|Dgka|13139|diacylglycerol kinase, alpha	NM_016811|Dgka|13139|diacylglycerol kinase, alpha
mm9_v1_chr6_+_48689045_48689097	0.139009	CRX.p2	NM_008376|Gimap1|16205|GTPase, IMAP family member 1	NM_175860|Gimap1|16205|GTPase, IMAP family member 1	AK156732|Gimap1|16205|GTPase, IMAP family member 1	BC132601|Gimap1|16205|GTPase, IMAP family member 1	BC132603|Gimap1|16205|GTPase, IMAP family member 1	AK169133|Gimap1|16205|GTPase, IMAP family member 1
mm9_v1_chr6_-_48522660_48522745	0.137917	CRX.p2	AK002298|Rarres2|71660|retinoic acid receptor responder (tazarotene induced) 2	NM_027852|Rarres2|71660|retinoic acid receptor responder (tazarotene induced) 2	BC038914|Rarres2|71660|retinoic acid receptor responder (tazarotene induced) 2
mm9_v1_chr4_+_116667905_116667941	0.137883	CRX.p2	AK163323|Hectd3|76608|HECT domain containing 3	AK165482|Hectd3|76608|HECT domain containing 3	AK154378|Hectd3|76608|HECT domain containing 3	AK139305|Hectd3|76608|HECT domain containing 3	AK051385|Hectd3|76608|HECT domain containing 3	AK155290|Hectd3|76608|HECT domain containing 3	AK155676|Hectd3|76608|HECT domain containing 3	AK170930|Hectd3|76608|HECT domain containing 3
mm9_v1_chr11_-_102786403_102786422	0.136967	CRX.p2	AK156592|Kif18b|70218|kinesin family member 18B	BC057614|Kif18b|70218|kinesin family member 18B
mm9_v1_chr2_-_10052196_10052339	0.136768	CRX.p2	AK133782|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	BC034341|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	X70392|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	NM_010582|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2
mm9_v1_chr10_-_82800561_82800561	0.136089	CRX.p2	AK038549|Slc41a2|338365|solute carrier family 41, member 2	NM_177388|Slc41a2|338365|solute carrier family 41, member 2
mm9_v1_chr10_-_80119815_80119815	0.133913	CRX.p2	NM_145361|Btbd2|208198|BTB (POZ) domain containing 2
mm9_v1_chr17_+_87762817_87762839	0.133744	CRX.p2	BC057906|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr7_-_52381569_52381578	0.133625	CRX.p2	BC034450|Rpl13a|22121|ribosomal protein L13A	BC042392|Rpl13a|22121|ribosomal protein L13A
mm9_v1_chr7_+_3568955_3568990	0.131722	CRX.p2	AK019099|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	NM_025348|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC120712|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC120714|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	AK006243|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC061002|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	AK003133|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3
mm9_v1_chrX_-_7709452_7709736	0.131467	CRX.p2	AF513713|Wdr13|73447|WD repeat domain 13	BC125287|Wdr13|73447|WD repeat domain 13	BC120553|Wdr13|73447|WD repeat domain 13	AK017549|Wdr13|73447|WD repeat domain 13	AF353243|Wdr13|73447|WD repeat domain 13	BC037502|Wdr13|73447|WD repeat domain 13	BC108332|Wdr13|73447|WD repeat domain 13
mm9_v1_chr5_-_104508289_104508325	0.131425	CRX.p2	AK002996|Sparcl1|13602|SPARC-like 1
mm9_v1_chr6_+_79969636_79969636	0.130972	CRX.p2	NM_178731|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chr11_+_58120583_58120673	0.130461	CRX.p2	BC055041|Zfp692|103836|zinc finger protein 692	AK154896|Zfp692|103836|zinc finger protein 692	AK031177|Zfp692|103836|zinc finger protein 692	BC145470|Zfp692|103836|zinc finger protein 692	BC150776|Zfp692|103836|zinc finger protein 692
mm9_v1_chr11_-_79067893_79067979	0.130369	CRX.p2	AF033186|Wsb1|78889|WD repeat and SOCS box-containing 1	BC053391|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr2_-_51828440_51828551	0.1295	CRX.p2	BC002019|Nmi|64685|N-myc (and STAT) interactor	AK146577|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr11_-_78959855_78959908	0.129388	CRX.p2	NM_013571|Ksr1|16706|kinase suppressor of ras 1	U43585|Ksr1|16706|kinase suppressor of ras 1	AK036566|Ksr1|16706|kinase suppressor of ras 1
mm9_v1_chr7_-_16531098_16531150	0.129354	CRX.p2	AK079167|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK158665|Gltscr2|68077|glioma tumor suppressor candidate region gene 2
mm9_v1_chr14_-_52530382_52530466	0.128246	CRX.p2	AK076514|Ndrg2|29811|N-myc downstream regulated gene 2	AK173136|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr8_+_87561055_87561132	0.127865	CRX.p2	NM_001122843|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	BC003275|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr3_+_101890431_101890567	0.127201	CRX.p2	AF068244|Casq2|12373|calsequestrin 2	NM_009814|Casq2|12373|calsequestrin 2	BC092229|Casq2|12373|calsequestrin 2	BC137668|Casq2|12373|calsequestrin 2	BC140959|Casq2|12373|calsequestrin 2	U91483|Casq2|12373|calsequestrin 2
mm9_v1_chr2_-_58998590_58998708	0.12715	CRX.p2	AK040157|Ccdc148|227933|coiled-coil domain containing 148	BC062650|Ccdc148|227933|coiled-coil domain containing 148	NM_001001178|Ccdc148|227933|coiled-coil domain containing 148
mm9_v1_chr4_+_122860705_122860828	0.127034	CRX.p2	AK032591|Hpcal4|170638|hippocalcin-like 4	NM_174998|Hpcal4|170638|hippocalcin-like 4
mm9_v1_chr15_+_82176533_82176625	0.125132	CRX.p2	
mm9_v1_chr11_+_6315729_6315787	0.124971	CRX.p2	AK151583|Ppia|268373|peptidylprolyl isomerase A
mm9_v1_chr1_-_175266945_175266952	0.124512	CRX.p2	AK031927|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr2_-_84615535_84615589	0.12413	CRX.p2	Y10386|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	AF010254|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	NM_009776|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm9_v1_chr4_+_117222924_117223239	0.123785	CRX.p2	AK144107|Eri3|140546|exoribonuclease 3	BC096545|Eri3|140546|exoribonuclease 3	AK083017|Eri3|140546|exoribonuclease 3	NM_080469|Eri3|140546|exoribonuclease 3	BC116685|Eri3|140546|exoribonuclease 3	BC117540|Eri3|140546|exoribonuclease 3
mm9_v1_chr10_+_115580947_115580958	0.122352	CRX.p2	Z30313|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr11_-_83391984_83392037	0.122066	CRX.p2	AF128195|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128196|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128197|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128198|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128199|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128200|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128201|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128202|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128203|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128204|Ccl9|20308|chemokine (C-C motif) ligand 9	BC139318|Ccl9|20308|chemokine (C-C motif) ligand 9	BC145962|Ccl9|20308|chemokine (C-C motif) ligand 9	U49513|Ccl9|20308|chemokine (C-C motif) ligand 9	AK151131|Ccl9|20308|chemokine (C-C motif) ligand 9	AK155036|Ccl9|20308|chemokine (C-C motif) ligand 9	AK154511|Ccl9|20308|chemokine (C-C motif) ligand 9	AK154657|Ccl9|20308|chemokine (C-C motif) ligand 9	AK155032|Ccl9|20308|chemokine (C-C motif) ligand 9	AK151649|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr19_+_4745119_4745306	0.120989	CRX.p2	BC079628|Spnb3|20743|spectrin beta 3	BC048851|Spnb3|20743|spectrin beta 3
mm9_v1_chr2_-_148701126_148701154	0.120534	CRX.p2	M59470|Cst3|13010|cystatin C	BC002072|Cst3|13010|cystatin C
mm9_v1_chr4_+_43681807_43681971	0.120444	CRX.p2	AK029713|Tmem8b|242409|transmembrane protein 8B	NM_001085508|Tmem8b|242409|transmembrane protein 8B	BC147569|Tmem8b|242409|transmembrane protein 8B	BC147574|Tmem8b|242409|transmembrane protein 8B	BC151067|Tmem8b|242409|transmembrane protein 8B	BC151070|Tmem8b|242409|transmembrane protein 8B
mm9_v1_chr5_+_14514906_14514924	0.120198	CRX.p2	NM_001110796|Pclo|26875|piccolo (presynaptic cytomatrix protein)	NM_011995|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19185|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19186|Pclo|26875|piccolo (presynaptic cytomatrix protein)
mm9_v1_chr17_-_56144975_56145021	0.119505	CRX.p2	BC026642|Stap2|106766|signal transducing adaptor family member 2	NM_145934|Stap2|106766|signal transducing adaptor family member 2	AK050172|Stap2|106766|signal transducing adaptor family member 2	AK050131|Stap2|106766|signal transducing adaptor family member 2
mm9_v1_chr9_-_78290953_78291043	0.119413	CRX.p2	BC052196|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	NM_173386|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK078662|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK054330|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK145268|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK154165|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	BC145651|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	BC145653|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK030292|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene
mm9_v1_chr18_+_37105758_37105860	0.11933	CRX.p2	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chr6_+_15670660_15670769	0.117853	CRX.p2	AK165016|Mdfic|16543|MyoD family inhibitor domain containing	NM_175088|Mdfic|16543|MyoD family inhibitor domain containing	AK086117|Mdfic|16543|MyoD family inhibitor domain containing	AK172522|Mdfic|16543|MyoD family inhibitor domain containing	AK166462|Mdfic|16543|MyoD family inhibitor domain containing	AK080178|Mdfic|16543|MyoD family inhibitor domain containing	AK134050|Mdfic|16543|MyoD family inhibitor domain containing	AK048821|Mdfic|16543|MyoD family inhibitor domain containing
mm9_v1_chr4_+_44045506_44045645	0.117706	CRX.p2	
mm9_v1_chr7_-_88489894_88490088	0.116584	CRX.p2	BC081466|Rps17|20068|ribosomal protein S17	D25213|Rps17|20068|ribosomal protein S17	AK158902|Rps17|20068|ribosomal protein S17
mm9_v1_chr6_-_53018566_53018625	0.116134	CRX.p2	AK043767|Jazf1|231986|JAZF zinc finger 1	AK050474|Jazf1|231986|JAZF zinc finger 1	NM_173406|Jazf1|231986|JAZF zinc finger 1
mm9_v1_chr2_+_121781736_121781881	0.115468	CRX.p2	AK163262|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK082646|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm9_v1_chr2_-_37502738_37502804	0.114578	CRX.p2	X84692|Strbp|20744|spermatid perinuclear RNA binding protein	NM_009261|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chrX_-_100381703_100381961	0.114476	CRX.p2	BC115708|Nap1l2|17954|nucleosome assembly protein 1-like 2	BC115761|Nap1l2|17954|nucleosome assembly protein 1-like 2	AK051439|Nap1l2|17954|nucleosome assembly protein 1-like 2	AK131621|Nap1l2|17954|nucleosome assembly protein 1-like 2	AK077430|Nap1l2|17954|nucleosome assembly protein 1-like 2
mm9_v1_chr10_+_59165307_59165416	0.111823	CRX.p2	AK083520|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK049521|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK050113|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK046049|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC026566|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK077605|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK029884|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK052485|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC018320|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC023022|Cbara1|216001|calcium binding atopy-related autoantigen 1	NM_144822|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK085553|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK051470|Cbara1|216001|calcium binding atopy-related autoantigen 1
mm9_v1_chrX_-_34185389_34185408	0.111529	CRX.p2	AK046007|Akap17b|338351|A kinase (PRKA) anchor protein 17B	AK054091|Akap17b|338351|A kinase (PRKA) anchor protein 17B	NM_001081956|Akap17b|338351|A kinase (PRKA) anchor protein 17B
mm9_v1_chr4_-_140991985_140992019	0.11125	CRX.p2	BC147054|Gm694|277744|predicted gene 694	BC147055|Gm694|277744|predicted gene 694	AK145525|Gm694|277744|predicted gene 694	NM_001033374|Gm694|277744|predicted gene 694
mm9_v1_chr1_+_88199795_88199833	0.111033	CRX.p2	NM_145222|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AK080081|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AF502429|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
mm9_v1_chr5_+_117570113_117570195	0.110958	CRX.p2	AK040531|Taok3|330177|TAO kinase 3	BC158072|Taok3|330177|TAO kinase 3
mm9_v1_chr7_-_29551532_29551548	0.110343	CRX.p2	AY176059|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	AK038631|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	NM_010908|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
mm9_v1_chr5_-_91069499_91069680	0.11032	CRX.p2	AK005472|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	AK132288|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	NM_028478|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	BC031808|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6
mm9_v1_chr17_-_35342157_35342435	0.109993	CRX.p2	AK080308|Lta|16992|lymphotoxin A	AK153694|Lta|16992|lymphotoxin A	BC099464|Lta|16992|lymphotoxin A	NM_010735|Lta|16992|lymphotoxin A	AK156659|Lta|16992|lymphotoxin A
mm9_v1_chr8_-_42300504_42300520	0.109444	CRX.p2	AF478470|Fgl1|234199|fibrinogen-like protein 1	AK083397|Fgl1|234199|fibrinogen-like protein 1	NM_145594|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chr11_-_115560691_115560842	0.109381	CRX.p2	AK077750|Grb2|14784|growth factor receptor bound protein 2	AK079087|Grb2|14784|growth factor receptor bound protein 2	AK153557|Grb2|14784|growth factor receptor bound protein 2
mm9_v1_chr10_+_126827366_126827366	0.109039	CRX.p2	NM_001168292|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr9_+_110322311_110322361	0.108875	CRX.p2	NM_008694|Ngp|18054|neutrophilic granule protein	BC119403|Ngp|18054|neutrophilic granule protein	BC119405|Ngp|18054|neutrophilic granule protein	U95002|Ngp|18054|neutrophilic granule protein	AK009649|Ngp|18054|neutrophilic granule protein	AK165210|Ngp|18054|neutrophilic granule protein
mm9_v1_chr1_+_120285634_120285634	0.108742	CRX.p2	AK042402|Clasp1|76707|CLIP associating protein 1	NM_001081276|Clasp1|76707|CLIP associating protein 1	NM_029709|Clasp1|76707|CLIP associating protein 1	NM_177548|Clasp1|76707|CLIP associating protein 1
mm9_v1_chr2_-_130455760_130455777	0.107832	CRX.p2	AK170024|Ubox5|140629|U box domain containing 5	NM_001146084|Fastkd5|380601|FAST kinase domains 5	NM_198176|Fastkd5|380601|FAST kinase domains 5
mm9_v1_chr4_+_84530259_84530307	0.107339	CRX.p2	AK052558|Cntln|338349|centlein, centrosomal protein	AK031604|Cntln|338349|centlein, centrosomal protein
mm9_v1_chr2_-_155755998_155756045	0.106791	CRX.p2	BC050884|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	BC057570|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK139488|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	NM_018888|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)
mm9_v1_chr9_+_21125147_21125248	0.106534	CRX.p2	AK153992|Slc44a2|68682|solute carrier family 44, member 2	BC023763|Slc44a2|68682|solute carrier family 44, member 2	AK043924|Slc44a2|68682|solute carrier family 44, member 2	AK029457|Slc44a2|68682|solute carrier family 44, member 2	AK041533|Slc44a2|68682|solute carrier family 44, member 2	AK088553|Slc44a2|68682|solute carrier family 44, member 2
mm9_v1_chr9_-_44728790_44728826	0.106379	CRX.p2	AK011099|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019320|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008036|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008169|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	BC089555|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005380|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	NM_013795|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
mm9_v1_chr5_+_144519150_144519171	0.106378	CRX.p2	AK040221|D130017N08Rik|320064|RIKEN cDNA D130017N08 gene
mm9_v1_chr1_+_148344816_148344867	0.106325	CRX.p2	NM_001145807|Fam5c|215378|family with sequence similarity 5, member C	AK083233|Fam5c|215378|family with sequence similarity 5, member C	BC030498|Fam5c|215378|family with sequence similarity 5, member C	AK140520|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr15_+_81494399_81494424	0.106233	CRX.p2	BC023933|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	BC030864|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK141810|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr16_+_94664089_94664229	0.10583	CRX.p2	AK164492|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr9_+_58100961_58101075	0.105595	CRX.p2	NM_026942|Stoml1|69106|stomatin-like 1	AK045820|Stoml1|69106|stomatin-like 1	BC017536|Stoml1|69106|stomatin-like 1	BC037074|Stoml1|69106|stomatin-like 1	AK148324|Stoml1|69106|stomatin-like 1
mm9_v1_chr9_-_66881744_66881755	0.104551	CRX.p2	AK210663|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chrX_+_20271802_20271845	0.104209	CRX.p2	AK214881|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr9_-_21875719_21875761	0.102829	CRX.p2	AK046492|Zfp653|319601|zinc finger protein 653	AK157635|Zfp653|319601|zinc finger protein 653
mm9_v1_chr3_+_95330700_95330810	0.102759	CRX.p2	AK028366|Ctss|13040|cathepsin S	NM_021281|Ctss|13040|cathepsin S	AJ002386|Ctss|13040|cathepsin S	AK152191|Ctss|13040|cathepsin S	AF038546|Ctss|13040|cathepsin S	AK150274|Ctss|13040|cathepsin S	BC011104|Ctss|13040|cathepsin S	BC002125|Ctss|13040|cathepsin S
mm9_v1_chr6_-_134742342_134742495	0.102646	CRX.p2	AB052157|Dusp16|70686|dual specificity phosphatase 16	BC059232|Dusp16|70686|dual specificity phosphatase 16	AF345951|Dusp16|70686|dual specificity phosphatase 16	AF345952|Dusp16|70686|dual specificity phosphatase 16	AF345953|Dusp16|70686|dual specificity phosphatase 16	AF345954|Dusp16|70686|dual specificity phosphatase 16	BC057321|Dusp16|70686|dual specificity phosphatase 16
mm9_v1_chr2_-_5816445_5816477	0.101758	CRX.p2	AK161316|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr17_-_57150708_57150759	0.101053	CRX.p2	BC003336|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	BC023081|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	NM_133801|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168236|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168243|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK013002|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK078048|Gtf2f1|98053|general transcription factor IIF, polypeptide 1
mm9_v1_chr3_-_129525375_129525422	0.100111	CRX.p2	BC046288|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK044717|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AF012271|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK021379|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	NM_009102|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog
mm9_v1_chr12_-_111829789_111829814	0.100061	CRX.p2	AK020436|9430024F10Rik|77271|RIKEN cDNA 9430024F10 gene
mm9_v1_chr4_-_131909543_131909559	0.099839	CRX.p2	AJ006837|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3	AK076188|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3
mm9_v1_chr10_-_45189997_45190006	0.0997767	CRX.p2	BC089037|Lin28b|380669|lin-28 homolog B (C. elegans)	BC085193|Lin28b|380669|lin-28 homolog B (C. elegans)	DQ127225|Lin28b|380669|lin-28 homolog B (C. elegans)	NM_001031772|Lin28b|380669|lin-28 homolog B (C. elegans)
mm9_v1_chr14_-_119322244_119322388	0.0992567	CRX.p2	AK129256|Dzip1|66573|DAZ interacting protein 1	NM_025943|Dzip1|66573|DAZ interacting protein 1
mm9_v1_chr19_+_9023469_9023512	0.0990755	CRX.p2	AK180875|Mta2|23942|metastasis-associated gene family, member 2	AK185607|Mta2|23942|metastasis-associated gene family, member 2	AK210254|Mta2|23942|metastasis-associated gene family, member 2	AK211099|Mta2|23942|metastasis-associated gene family, member 2	AK218258|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr2_-_4544898_4544915	0.0990621	CRX.p2	BC019370|Prpf18|67229|PRP18 pre-mRNA processing factor 18 homolog (yeast)
mm9_v1_chr15_+_54943878_54943952	0.09895	CRX.p2	BC004774|Deptor|97998|DEP domain containing MTOR-interacting protein
mm9_v1_chr11_+_98547296_98547343	0.0989499	CRX.p2	AK180273|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm9_v1_chr7_-_16807341_16807387	0.0988508	CRX.p2	BC080856|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK129062|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK004733|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	NM_027883|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm9_v1_chr10_+_79755175_79755234	0.0986924	CRX.p2	NM_009091|Rps15|20054|ribosomal protein S15	M33330|Rps15|20054|ribosomal protein S15	AK146147|Rps15|20054|ribosomal protein S15	AK135319|Rps15|20054|ribosomal protein S15
mm9_v1_chr18_+_37896589_37896589	0.0983197	CRX.p2	BC079567|Pcdhga9|93717|protocadherin gamma subfamily A, 9	NM_033592|Pcdhga9|93717|protocadherin gamma subfamily A, 9
mm9_v1_chr4_+_115823089_115823207	0.0974782	CRX.p2	NM_026651|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	NM_029786|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	AK002638|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	AB053220|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	BC011201|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	AK183969|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase
mm9_v1_chrX_-_150130711_150130822	0.0974243	CRX.p2	AK046557|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK050097|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK046708|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK085035|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	BC064459|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	NM_175429|Kctd12b|207474|potassium channel tetramerisation domain containing 12b
mm9_v1_chr9_+_14080805_14080923	0.0973881	CRX.p2	AK017464|Sesn3|75747|sestrin 3	BC132086|Sesn3|75747|sestrin 3	BC138690|Sesn3|75747|sestrin 3
mm9_v1_chr3_-_129035406_129035666	0.0973194	CRX.p2	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr4_-_119212968_119213006	0.0972111	CRX.p2	AK086686|AA415398|433752|expressed sequence AA415398
mm9_v1_chr17_-_56749096_56749193	0.0965695	CRX.p2	BC056164|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	BC049674|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AK075942|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AY091637|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AK075961|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	NM_153152|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene
mm9_v1_chr4_+_84530337_84530355	0.0963972	CRX.p2	BC125622|Cntln|338349|centlein, centrosomal protein	BC125624|Cntln|338349|centlein, centrosomal protein
mm9_v1_chr9_+_114640266_114640368	0.0962871	CRX.p2	AK171394|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152723|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152817|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK012941|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK150775|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151431|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152448|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK153092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	NM_026036|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK170905|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159735|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167854|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK128960|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK154481|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167499|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK030885|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK145743|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	BC027248|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK165948|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159439|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6
mm9_v1_chr16_-_18407565_18407802	0.0955441	CRX.p2	AK084547|Comt|12846|catechol-O-methyltransferase	AK133500|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr8_-_86217895_86217983	0.0951258	CRX.p2	AK150062|Pkn1|320795|protein kinase N1	AK149649|Pkn1|320795|protein kinase N1	AK089431|Pkn1|320795|protein kinase N1	AK171297|Pkn1|320795|protein kinase N1
mm9_v1_chr13_+_77847947_77848021	0.0949267	CRX.p2	NM_001163419|Fam172a|68675|family with sequence similarity 172, member A	NM_001163420|Fam172a|68675|family with sequence similarity 172, member A	NM_138312|Fam172a|68675|family with sequence similarity 172, member A	AK165273|Fam172a|68675|family with sequence similarity 172, member A	AK052419|Fam172a|68675|family with sequence similarity 172, member A	AK166285|Fam172a|68675|family with sequence similarity 172, member A	BC057380|Fam172a|68675|family with sequence similarity 172, member A	AK049727|Fam172a|68675|family with sequence similarity 172, member A	AF064782|Fam172a|68675|family with sequence similarity 172, member A	AK081188|Fam172a|68675|family with sequence similarity 172, member A
mm9_v1_chr2_-_25052245_25052332	0.0946884	CRX.p2	BC013092|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK155540|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	NM_146115|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene
mm9_v1_chr3_+_80840609_80840648	0.0943202	CRX.p2	AK033734|Pdgfc|54635|platelet-derived growth factor, C polypeptide
mm9_v1_chr19_+_47938880_47939051	0.0939135	CRX.p2	AK187657|Gsto1|14873|glutathione S-transferase omega 1	AK187708|Gsto1|14873|glutathione S-transferase omega 1	AK209032|Gsto1|14873|glutathione S-transferase omega 1
mm9_v1_chr4_+_99768392_99768410	0.0932112	CRX.p2	AK049369|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	NM_013845|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	BC138794|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	BC138810|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1
mm9_v1_chr17_-_45724536_45724608	0.0928821	CRX.p2	AK198320|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AK212529|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr18_+_56899574_56899584	0.0926589	CRX.p2	
mm9_v1_chr7_-_53922712_53922746	0.0926016	CRX.p2	AK157858|Tph1|21990|tryptophan hydroxylase 1	J04758|Tph1|21990|tryptophan hydroxylase 1	NM_001136084|Tph1|21990|tryptophan hydroxylase 1	AF273257|Tph1|21990|tryptophan hydroxylase 1	AK146134|Tph1|21990|tryptophan hydroxylase 1	AK146171|Tph1|21990|tryptophan hydroxylase 1
mm9_v1_chr2_-_121181055_121181098	0.0924651	CRX.p2	AK160847|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1
mm9_v1_chr1_-_54983048_54983087	0.0921641	CRX.p2	BC157918|Ankrd44|329154|ankyrin repeat domain 44	BC157951|Ankrd44|329154|ankyrin repeat domain 44	BC172102|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr6_-_83781704_83781750	0.0916295	CRX.p2	AK140686|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK159287|Paip2b|232164|poly(A) binding protein interacting protein 2B	NM_146169|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr16_-_15594566_15594585	0.0909541	CRX.p2	BC029742|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	BC094903|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	BC044722|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	AK031233|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	AK019486|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	AK146073|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	BC058374|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	AK028472|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	BC083098|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2
mm9_v1_chr10_-_75931585_75931614	0.0909488	CRX.p2	AK037727|Ybey|216119|ybeY metallopeptidase	AK051909|Ybey|216119|ybeY metallopeptidase	AK136543|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr10_+_59757371_59757391	0.0905892	CRX.p2	
mm9_v1_chr5_-_125870095_125870129	0.0899749	CRX.p2	BC036303|Ubc|22190|ubiquitin C	D50527|Ubc|22190|ubiquitin C	BC006680|Ubc|22190|ubiquitin C	BC008661|Ubc|22190|ubiquitin C	BC021837|Ubc|22190|ubiquitin C	BC094012|Ubc|22190|ubiquitin C	BC025894|Ubc|22190|ubiquitin C	AK010964|Ubc|22190|ubiquitin C	AK168448|Ubc|22190|ubiquitin C
mm9_v1_chr17_+_28450489_28450522	0.0891871	CRX.p2	AK172283|Fance|72775|Fanconi anemia, complementation group E	AK135017|Fance|72775|Fanconi anemia, complementation group E	AK013325|Fance|72775|Fanconi anemia, complementation group E	BC039987|Fance|72775|Fanconi anemia, complementation group E	BC016538|Fance|72775|Fanconi anemia, complementation group E
mm9_v1_chr14_+_8930682_8930828	0.0890992	CRX.p2	AK150660|Pxk|218699|PX domain containing serine/threonine kinase	AK147037|Pxk|218699|PX domain containing serine/threonine kinase	AK172463|Pxk|218699|PX domain containing serine/threonine kinase	NM_145458|Pxk|218699|PX domain containing serine/threonine kinase	NM_178279|Pxk|218699|PX domain containing serine/threonine kinase	AK170361|Pxk|218699|PX domain containing serine/threonine kinase	AK157364|Pxk|218699|PX domain containing serine/threonine kinase	AK150337|Pxk|218699|PX domain containing serine/threonine kinase	AK150413|Pxk|218699|PX domain containing serine/threonine kinase	BC016131|Pxk|218699|PX domain containing serine/threonine kinase	AK156146|Pxk|218699|PX domain containing serine/threonine kinase	AK169565|Pxk|218699|PX domain containing serine/threonine kinase	AK048910|Pxk|218699|PX domain containing serine/threonine kinase	AK151098|Pxk|218699|PX domain containing serine/threonine kinase	AK152058|Pxk|218699|PX domain containing serine/threonine kinase	AK152789|Pxk|218699|PX domain containing serine/threonine kinase	AK153067|Pxk|218699|PX domain containing serine/threonine kinase	AK169112|Pxk|218699|PX domain containing serine/threonine kinase	AK028501|Pxk|218699|PX domain containing serine/threonine kinase	AK172347|Pxk|218699|PX domain containing serine/threonine kinase	AK166036|Pxk|218699|PX domain containing serine/threonine kinase	DQ095196|Pxk|218699|PX domain containing serine/threonine kinase	DQ095197|Pxk|218699|PX domain containing serine/threonine kinase
mm9_v1_chr17_-_26081875_26081875	0.0887048	CRX.p2	AK143822|Nhlrc4|621239|NHL repeat containing 4	NM_001039038|Nhlrc4|621239|NHL repeat containing 4
mm9_v1_chr14_+_63760617_63760645	0.0881321	CRX.p2	AK190827|Ctsb|13030|cathepsin B
mm9_v1_chr11_+_20124648_20124793	0.0880028	CRX.p2	AK207850|Rab1|19324|RAB1, member RAS oncogene family	AK215283|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr11_+_95720178_95720317	0.0879613	CRX.p2	AK014714|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene	AK133925|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene
mm9_v1_chr5_+_121654495_121654559	0.0875226	CRX.p2	AK153208|Rpl6|19988|ribosomal protein L6	NM_011290|Rpl6|19988|ribosomal protein L6	AK150540|Rpl6|19988|ribosomal protein L6	AK151344|Rpl6|19988|ribosomal protein L6	AK151759|Rpl6|19988|ribosomal protein L6	AK151022|Rpl6|19988|ribosomal protein L6	AK153507|Rpl6|19988|ribosomal protein L6	AK167439|Rpl6|19988|ribosomal protein L6	AK135175|Rpl6|19988|ribosomal protein L6	AK148479|Rpl6|19988|ribosomal protein L6	AK002248|Rpl6|19988|ribosomal protein L6	AK002648|Rpl6|19988|ribosomal protein L6
mm9_v1_chr11_-_3814666_3814666	0.0871332	CRX.p2	AK039786|Slc35e4|103710|solute carrier family 35, member E4	NM_153142|Slc35e4|103710|solute carrier family 35, member E4
mm9_v1_chrX_-_105011493_105011672	0.0870601	CRX.p2	AK019383|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	BC016070|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	AK011297|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	NM_025921|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene
mm9_v1_chr16_+_95924069_95924179	0.0867057	CRX.p2	AK150175|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK014602|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005486|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	J04103|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005504|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK145852|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr8_+_72676676_72676679	0.0861743	CRX.p2	BC045147|Mef2b|17259|myocyte enhancer factor 2B	NM_001045484|Mef2b|17259|myocyte enhancer factor 2B	NM_008578|Mef2b|17259|myocyte enhancer factor 2B	D87833|Mef2b|17259|myocyte enhancer factor 2B	D87834|Mef2b|17259|myocyte enhancer factor 2B	D87835|Mef2b|17259|myocyte enhancer factor 2B	D87836|Mef2b|17259|myocyte enhancer factor 2B
mm9_v1_chr8_+_108703203_108703313	0.0861061	CRX.p2	
mm9_v1_chr19_+_46697882_46697901	0.0861004	CRX.p2	AK078491|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK142695|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	NM_001177813|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK052400|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed
mm9_v1_chr7_-_112900699_112900744	0.0860895	CRX.p2	AJ011912|Tpp1|12751|tripeptidyl peptidase I	BC024820|Tpp1|12751|tripeptidyl peptidase I	AK170781|Tpp1|12751|tripeptidyl peptidase I	AK146759|Tpp1|12751|tripeptidyl peptidase I	AK048279|Tpp1|12751|tripeptidyl peptidase I	NM_009906|Tpp1|12751|tripeptidyl peptidase I	AK083832|Tpp1|12751|tripeptidyl peptidase I	AK169924|Tpp1|12751|tripeptidyl peptidase I	AF111172|Tpp1|12751|tripeptidyl peptidase I	AK155021|Tpp1|12751|tripeptidyl peptidase I	AK002418|Tpp1|12751|tripeptidyl peptidase I	AK165669|Tpp1|12751|tripeptidyl peptidase I
mm9_v1_chr14_+_31362306_31362551	0.0851889	CRX.p2	AK166763|Tkt|21881|transketolase	AK167084|Tkt|21881|transketolase	AK140965|Tkt|21881|transketolase	AK030446|Tkt|21881|transketolase	NM_009388|Tkt|21881|transketolase	AK152460|Tkt|21881|transketolase	AK002627|Tkt|21881|transketolase	AK012794|Tkt|21881|transketolase	AK145677|Tkt|21881|transketolase	AK150139|Tkt|21881|transketolase	AK150901|Tkt|21881|transketolase	AK159922|Tkt|21881|transketolase	U05809|Tkt|21881|transketolase	AK050793|Tkt|21881|transketolase	AK146157|Tkt|21881|transketolase	AK144146|Tkt|21881|transketolase	AK150769|Tkt|21881|transketolase	AK150844|Tkt|21881|transketolase	AK150856|Tkt|21881|transketolase	AK152245|Tkt|21881|transketolase	AK151916|Tkt|21881|transketolase	AK151969|Tkt|21881|transketolase	AK152886|Tkt|21881|transketolase	BC055336|Tkt|21881|transketolase	AK216935|Tkt|21881|transketolase	AK181952|Tkt|21881|transketolase
mm9_v1_chr7_-_4465970_4466046	0.0851846	CRX.p2	AJ131711|Tnnt1|21955|troponin T1, skeletal, slow
mm9_v1_chr7_+_5008311_5008341	0.0850543	CRX.p2	NM_146178|Ccdc106|232821|coiled-coil domain containing 106	AB041804|Ccdc106|232821|coiled-coil domain containing 106
mm9_v1_chr1_+_89967340_89967428	0.0845379	CRX.p2	NM_201644|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	AY227200|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	BC138699|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	BC146021|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	BC019434|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	L27122|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	S57479|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9
mm9_v1_chr11_-_116060118_116060156	0.0841624	CRX.p2	AK054446|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl
mm9_v1_chr19_-_11410534_11410635	0.083535	CRX.p2	AK085297|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC019784|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC024402|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AF237917|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_027836|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK149890|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK018686|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK151261|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK152098|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_001025610|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK046559|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7
mm9_v1_chr15_-_102455844_102455918	0.0834234	CRX.p2	BC026483|Atf7|223922|activating transcription factor 7	NM_146065|Atf7|223922|activating transcription factor 7	AK155444|Atf7|223922|activating transcription factor 7	AK157628|Atf7|223922|activating transcription factor 7	AK164412|Atf7|223922|activating transcription factor 7
mm9_v1_chr1_-_95518831_95518886	0.0828633	CRX.p2	AK211456|Stk25|59041|serine/threonine kinase 25 (yeast)
mm9_v1_chr3_-_108707417_108707441	0.0827469	CRX.p2	AK007374|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr2_+_73150702_73150790	0.0822405	CRX.p2	NM_029022|Scrn3|74616|secernin 3	AK143725|Scrn3|74616|secernin 3	AK165936|Scrn3|74616|secernin 3	BC139390|Scrn3|74616|secernin 3	BC139391|Scrn3|74616|secernin 3	AK014701|Scrn3|74616|secernin 3	AK050521|Scrn3|74616|secernin 3	AK028703|Scrn3|74616|secernin 3
mm9_v1_chr10_-_41738158_41738199	0.0821475	CRX.p2	AK011447|Armc2|213402|armadillo repeat containing 2	NM_001034858|Armc2|213402|armadillo repeat containing 2
mm9_v1_chr2_+_125691964_125692075	0.0820549	CRX.p2	AK171939|Galk2|69976|galactokinase 2	BC079843|Galk2|69976|galactokinase 2	AK053002|Galk2|69976|galactokinase 2	AK154762|Galk2|69976|galactokinase 2	AK176923|Galk2|69976|galactokinase 2	AK209145|Galk2|69976|galactokinase 2
mm9_v1_chr8_+_87560809_87560830	0.0818821	CRX.p2	AK154985|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	AK155760|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	NM_145390|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr7_+_107423813_107423829	0.0818068	CRX.p2	AK164085|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr2_+_152934184_152934350	0.0813764	CRX.p2	NM_001172117|Hck|15162|hemopoietic cell kinase	NM_010407|Hck|15162|hemopoietic cell kinase	AK150709|Hck|15162|hemopoietic cell kinase	AK150290|Hck|15162|hemopoietic cell kinase	AK152506|Hck|15162|hemopoietic cell kinase	AK149736|Hck|15162|hemopoietic cell kinase	AK165315|Hck|15162|hemopoietic cell kinase	AK159234|Hck|15162|hemopoietic cell kinase	AK155975|Hck|15162|hemopoietic cell kinase	Y00487|Hck|15162|hemopoietic cell kinase	J03023|Hck|15162|hemopoietic cell kinase
mm9_v1_chrX_+_101609180_101609330	0.0812454	CRX.p2	
mm9_v1_chr4_+_43455122_43455148	0.0805291	CRX.p2	BC099699|Tesk1|21754|testis specific protein kinase 1	NM_011571|Tesk1|21754|testis specific protein kinase 1
mm9_v1_chr13_-_35118959_35118964	0.0805226	CRX.p2	
mm9_v1_chr14_-_66043991_66044045	0.0802644	CRX.p2	D50055|Pnoc|18155|prepronociceptin	BC119372|Pnoc|18155|prepronociceptin	BC144865|Pnoc|18155|prepronociceptin	D50056|Pnoc|18155|prepronociceptin	AK045893|Pnoc|18155|prepronociceptin	NM_010932|Pnoc|18155|prepronociceptin
mm9_v1_chr6_+_34730847_34730979	0.0800971	CRX.p2	AK029798|Agbl3|76223|ATP/GTP binding protein-like 3	AK030378|Agbl3|76223|ATP/GTP binding protein-like 3	AK047649|Agbl3|76223|ATP/GTP binding protein-like 3	BC087897|Agbl3|76223|ATP/GTP binding protein-like 3	BC028521|Agbl3|76223|ATP/GTP binding protein-like 3	BC139065|Agbl3|76223|ATP/GTP binding protein-like 3
mm9_v1_chr16_-_15594609_15594629	0.0800233	CRX.p2	NM_001159351|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2	NM_023585|Ube2v2|70620|ubiquitin-conjugating enzyme E2 variant 2
mm9_v1_chr4_+_12067263_12067419	0.0789817	CRX.p2	NM_028226|Rbm12b|72397|RNA binding motif protein 12B	AK030861|Rbm12b|72397|RNA binding motif protein 12B
mm9_v1_chr9_-_112090150_112090479	0.0788732	CRX.p2	BC128376|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AF324451|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_033264|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK159004|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK002950|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	BC027107|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK160860|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177615|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177620|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_028755|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr18_-_73914084_73914137	0.0784408	CRX.p2	BC019371|Elac1|114615|elaC homolog 1 (E. coli)	AF308697|Elac1|114615|elaC homolog 1 (E. coli)	NM_053255|Elac1|114615|elaC homolog 1 (E. coli)
mm9_v1_chr10_-_75243786_75243866	0.0782712	CRX.p2	BC003903|Gstt3|103140|glutathione S-transferase, theta 3	AK168226|Gstt3|103140|glutathione S-transferase, theta 3	AK138669|Gstt3|103140|glutathione S-transferase, theta 3	AK154161|Gstt3|103140|glutathione S-transferase, theta 3
mm9_v1_chr3_+_96433850_96433878	0.0781471	CRX.p2	NM_001102407|Rbm8a|60365|RNA binding motif protein 8a	NM_025875|Rbm8a|60365|RNA binding motif protein 8a	AK009953|Rbm8a|60365|RNA binding motif protein 8a	AK010284|Rbm8a|60365|RNA binding motif protein 8a	AK011215|Rbm8a|60365|RNA binding motif protein 8a	AK082925|Rbm8a|60365|RNA binding motif protein 8a	BC020086|Rbm8a|60365|RNA binding motif protein 8a	BC058376|Rbm8a|60365|RNA binding motif protein 8a
mm9_v1_chr3_-_59147980_59148315	0.0780715	CRX.p2	AK132367|Igsf10|242050|immunoglobulin superfamily, member 10	NM_001162884|Igsf10|242050|immunoglobulin superfamily, member 10	AK143421|Igsf10|242050|immunoglobulin superfamily, member 10
mm9_v1_chr9_+_119266498_119266759	0.0777828	CRX.p2	AK143476|Xylb|102448|xylulokinase homolog (H. influenzae)	NM_001033209|Xylb|102448|xylulokinase homolog (H. influenzae)	BC138244|Xylb|102448|xylulokinase homolog (H. influenzae)	BC138247|Xylb|102448|xylulokinase homolog (H. influenzae)	AK170197|Xylb|102448|xylulokinase homolog (H. influenzae)	AK165440|Xylb|102448|xylulokinase homolog (H. influenzae)	AK165518|Xylb|102448|xylulokinase homolog (H. influenzae)	AK165759|Xylb|102448|xylulokinase homolog (H. influenzae)	AK164186|Xylb|102448|xylulokinase homolog (H. influenzae)	BC080743|Xylb|102448|xylulokinase homolog (H. influenzae)	BC025442|Xylb|102448|xylulokinase homolog (H. influenzae)
mm9_v1_chr2_+_125498825_125498913	0.077615	CRX.p2	AK002559|Eid1|58521|EP300 interacting inhibitor of differentiation 1	NM_025613|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK011293|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK012453|Eid1|58521|EP300 interacting inhibitor of differentiation 1	BC010712|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK077783|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK017543|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK169604|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK005258|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AL357453|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK078402|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK078409|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK148555|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK014440|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AF509968|Eid1|58521|EP300 interacting inhibitor of differentiation 1	AK078826|Eid1|58521|EP300 interacting inhibitor of differentiation 1	BC069897|Eid1|58521|EP300 interacting inhibitor of differentiation 1
mm9_v1_chr14_+_22569802_22569824	0.0775054	CRX.p2	AK075749|Samd8|67630|sterile alpha motif domain containing 8
mm9_v1_chr19_+_5026004_5026105	0.0770535	CRX.p2	X86682|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2
mm9_v1_chr11_-_60590796_60590866	0.0769455	CRX.p2	AB006074|Top3a|21975|topoisomerase (DNA) III alpha	NM_009410|Top3a|21975|topoisomerase (DNA) III alpha
mm9_v1_chr11_-_60590669_60590737	0.07625	CRX.p2	BC099689|Top3a|21975|topoisomerase (DNA) III alpha
mm9_v1_chr4_-_19849637_19849704	0.0760548	CRX.p2	AK089507|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	BC087899|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170578|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170659|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AB088358|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170405|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170072|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK137586|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AY517482|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr16_+_23609986_23610176	0.0757352	CRX.p2	NM_023386|Rtp4|67775|receptor transporter protein 4	AK018021|Rtp4|67775|receptor transporter protein 4	AJ251364|Rtp4|67775|receptor transporter protein 4	AK007477|Rtp4|67775|receptor transporter protein 4	BC024872|Rtp4|67775|receptor transporter protein 4	AY562228|Rtp4|67775|receptor transporter protein 4
mm9_v1_chr16_+_95924061_95924067	0.0754188	CRX.p2	AK128933|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK152750|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK143687|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK144974|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK151315|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK153339|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK153478|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr2_+_167757825_167757866	0.0754185	CRX.p2	AK157431|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	NM_011201|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK165567|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr11_+_87861368_87861382	0.0753279	CRX.p2	
mm9_v1_chr13_-_64468380_64468393	0.0749542	CRX.p2	Y18465|Ctsl|13039|cathepsin L
mm9_v1_chr7_+_110486525_110486569	0.0748445	CRX.p2	BC141003|Olfr599|258726|olfactory receptor 599	NM_146731|Olfr599|258726|olfactory receptor 599
mm9_v1_chr11_-_80191504_80191518	0.0745761	CRX.p2	BC044897|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK153246|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK078548|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	NM_027472|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene
mm9_v1_chr11_+_117848190_117848253	0.0745605	CRX.p2	AK163967|Pgs1|74451|phosphatidylglycerophosphate synthase 1	AK153001|Pgs1|74451|phosphatidylglycerophosphate synthase 1
mm9_v1_chr10_-_126532862_126532974	0.074277	CRX.p2	
mm9_v1_chr12_+_85328810_85328840	0.0741857	CRX.p2	NM_134188|Acot2|171210|acyl-CoA thioesterase 2	AK172617|Acot2|171210|acyl-CoA thioesterase 2	AK141651|Acot2|171210|acyl-CoA thioesterase 2	BC064469|Acot2|171210|acyl-CoA thioesterase 2
mm9_v1_chr6_+_114593104_114593174	0.0739198	CRX.p2	AK007484|Atg7|74244|autophagy-related 7 (yeast)	NM_028835|Atg7|74244|autophagy-related 7 (yeast)	AK166023|Atg7|74244|autophagy-related 7 (yeast)	AK170769|Atg7|74244|autophagy-related 7 (yeast)	AK146992|Atg7|74244|autophagy-related 7 (yeast)	AK161133|Atg7|74244|autophagy-related 7 (yeast)	AK165653|Atg7|74244|autophagy-related 7 (yeast)	AK166074|Atg7|74244|autophagy-related 7 (yeast)	AK171968|Atg7|74244|autophagy-related 7 (yeast)	AK172272|Atg7|74244|autophagy-related 7 (yeast)	BC058597|Atg7|74244|autophagy-related 7 (yeast)
mm9_v1_chr10_+_127795461_127795537	0.0730623	CRX.p2	DQ403125|Cs|12974|citrate synthase	AK012104|Cs|12974|citrate synthase
mm9_v1_chr7_-_88490106_88490126	0.0729937	CRX.p2	AK012781|Rps17|20068|ribosomal protein S17	AK162335|Rps17|20068|ribosomal protein S17	AK162022|Rps17|20068|ribosomal protein S17	AK167206|Rps17|20068|ribosomal protein S17	BC086900|Rps17|20068|ribosomal protein S17	BC086901|Rps17|20068|ribosomal protein S17	AK010647|Rps17|20068|ribosomal protein S17	NM_009092|Rps17|20068|ribosomal protein S17	AK007992|Rps17|20068|ribosomal protein S17
mm9_v1_chr10_-_126957997_126958064	0.0728488	CRX.p2	
mm9_v1_chr9_-_21875603_21875617	0.0723746	CRX.p2	AK089104|Zfp653|319601|zinc finger protein 653
mm9_v1_chr18_+_37501355_37501397	0.0721763	CRX.p2	AK034205|Pcdhb7|93878|protocadherin beta 7	NM_053132|Pcdhb7|93878|protocadherin beta 7	AK046463|Pcdhb7|93878|protocadherin beta 7	AK029340|Pcdhb7|93878|protocadherin beta 7	BC094897|Pcdhb7|93878|protocadherin beta 7	AK043979|Pcdhb7|93878|protocadherin beta 7
mm9_v1_chr7_+_148317160_148317300	0.0715912	CRX.p2	AK036368|Ptdss2|27388|phosphatidylserine synthase 2	NM_013782|Ptdss2|27388|phosphatidylserine synthase 2	AK031906|Ptdss2|27388|phosphatidylserine synthase 2	AK048026|Ptdss2|27388|phosphatidylserine synthase 2	AK081275|Ptdss2|27388|phosphatidylserine synthase 2	AK021249|Ptdss2|27388|phosphatidylserine synthase 2	AK032686|Ptdss2|27388|phosphatidylserine synthase 2	AK137415|Ptdss2|27388|phosphatidylserine synthase 2	BC053517|Ptdss2|27388|phosphatidylserine synthase 2	AF099053|Ptdss2|27388|phosphatidylserine synthase 2
mm9_v1_chr6_+_129130632_129130672	0.0712592	CRX.p2	AY320031|Clec2d|93694|C-type lectin domain family 2, member d	AF321553|Clec2d|93694|C-type lectin domain family 2, member d	NM_053109|Clec2d|93694|C-type lectin domain family 2, member d	AF350409|Clec2d|93694|C-type lectin domain family 2, member d	BC106776|Clec2d|93694|C-type lectin domain family 2, member d
mm9_v1_chr16_-_32868355_32868453	0.0712573	CRX.p2	BC057307|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK042428|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170223|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK122221|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK030368|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC060601|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	NM_172615|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170002|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK171583|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC067390|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene
mm9_v1_chr1_+_135934035_135934119	0.0709649	CRX.p2	AK054183|Fmod|14264|fibromodulin	AK080601|Fmod|14264|fibromodulin	AK082593|Fmod|14264|fibromodulin	BC052673|Fmod|14264|fibromodulin	AK032302|Fmod|14264|fibromodulin	AK053317|Fmod|14264|fibromodulin	NM_021355|Fmod|14264|fibromodulin	BC064779|Fmod|14264|fibromodulin	X94998|Fmod|14264|fibromodulin
mm9_v1_chr15_+_81494352_81494363	0.0708814	CRX.p2	AK146632|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr5_-_108298126_108298186	0.0703811	CRX.p2	AK134294|Evi5|14020|ecotropic viral integration site 5	AK162905|Evi5|14020|ecotropic viral integration site 5
mm9_v1_chr5_-_140251591_140251631	0.070338	CRX.p2	AB257854|Ints1|68510|integrator complex subunit 1	BC063266|Ints1|68510|integrator complex subunit 1	AK155838|Ints1|68510|integrator complex subunit 1	NM_026748|Ints1|68510|integrator complex subunit 1
mm9_v1_chr10_+_127525538_127525558	0.0701531	CRX.p2	AK193315|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK201737|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212560|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK213511|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216817|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217965|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217971|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220050|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr2_+_163843294_163843512	0.0700028	CRX.p2	AK206846|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK207996|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK212148|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK214843|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK215126|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK219468|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr5_+_145888588_145888809	0.0699757	CRX.p2	AK192837|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr13_-_23580611_23580725	0.0698534	CRX.p2	BC139760|Btn2a2|238555|butyrophilin, subfamily 2, member A2	BC141341|Btn2a2|238555|butyrophilin, subfamily 2, member A2	AY177686|Btn2a2|238555|butyrophilin, subfamily 2, member A2	AK051061|Btn2a2|238555|butyrophilin, subfamily 2, member A2	NM_175938|Btn2a2|238555|butyrophilin, subfamily 2, member A2
mm9_v1_chr4_-_118951578_118951709	0.0695497	CRX.p2	AK213628|Ybx1|22608|Y box protein 1	AK181881|Ybx1|22608|Y box protein 1	AK197905|Ybx1|22608|Y box protein 1
mm9_v1_chr8_+_125914690_125914738	0.0694159	CRX.p2	AK177952|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK179328|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK186829|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)
mm9_v1_chr11_-_83880574_83880586	0.0685288	CRX.p2	AK009744|Dusp14|56405|dual specificity phosphatase 14
mm9_v1_chr10_-_94786198_94786320	0.068293	CRX.p2	AJ224740|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK131713|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain
mm9_v1_chr11_-_62270815_62270835	0.0680962	CRX.p2	AK035813|Ncor1|20185|nuclear receptor co-repressor 1	AK077420|Ncor1|20185|nuclear receptor co-repressor 1	NM_011308|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr19_+_37624879_37624965	0.0680347	CRX.p2	AK151524|Exoc6|107371|exocyst complex component 6	AK151838|Exoc6|107371|exocyst complex component 6	NM_175353|Exoc6|107371|exocyst complex component 6	AK082881|Exoc6|107371|exocyst complex component 6	BC026859|Exoc6|107371|exocyst complex component 6
mm9_v1_chr11_+_106612525_106612642	0.0676651	CRX.p2	BC139224|Gm885|380732|predicted gene 885	BC139225|Gm885|380732|predicted gene 885	BC145580|Gm885|380732|predicted gene 885	BC145582|Gm885|380732|predicted gene 885	AK169925|Gm885|380732|predicted gene 885	AB542953|Gm885|380732|predicted gene 885	AK136488|Gm885|380732|predicted gene 885	AK137500|Gm885|380732|predicted gene 885	AK171381|Gm885|380732|predicted gene 885	NM_001033435|Gm885|380732|predicted gene 885	AK151814|Gm885|380732|predicted gene 885	AK170947|Gm885|380732|predicted gene 885	AK153506|Gm885|380732|predicted gene 885
mm9_v1_chr17_-_85489544_85489623	0.0675241	CRX.p2	AK083070|Prepl|213760|prolyl endopeptidase-like	BC004612|Prepl|213760|prolyl endopeptidase-like	AK028877|Prepl|213760|prolyl endopeptidase-like	AK163108|Prepl|213760|prolyl endopeptidase-like	AK020557|Prepl|213760|prolyl endopeptidase-like	AK050878|Prepl|213760|prolyl endopeptidase-like	NM_001163622|Prepl|213760|prolyl endopeptidase-like	NM_001163623|Prepl|213760|prolyl endopeptidase-like	NM_145984|Prepl|213760|prolyl endopeptidase-like	NM_001163624|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr2_+_180701966_180702005	0.0672171	CRX.p2	BC027794|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC016228|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030295|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AJ401461|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC052922|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK089321|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK052985|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK134402|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC059817|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030520|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177706|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr6_-_28371572_28371734	0.0671981	CRX.p2	BC066807|Gcc1|74375|golgi coiled coil 1	AK032253|Gcc1|74375|golgi coiled coil 1	NM_028900|Gcc1|74375|golgi coiled coil 1
mm9_v1_chr19_+_30020236_30020283	0.0668447	CRX.p2	AK075849|Il33|77125|interleukin 33	NM_001164724|Il33|77125|interleukin 33
mm9_v1_chrM_-_13886_13905	0.0664157	CRX.p2	
mm9_v1_chr2_-_34655238_34655332	0.0655213	CRX.p2	BC019800|Rabepk|227746|Rab9 effector protein with kelch motifs	AK035343|Rabepk|227746|Rab9 effector protein with kelch motifs	NM_145522|Rabepk|227746|Rab9 effector protein with kelch motifs	AK153022|Rabepk|227746|Rab9 effector protein with kelch motifs
mm9_v1_chr16_-_19983049_19983121	0.0651795	CRX.p2	AY350736|Klhl6|239743|kelch-like 6 (Drosophila)	BC100568|Klhl6|239743|kelch-like 6 (Drosophila)	NM_183390|Klhl6|239743|kelch-like 6 (Drosophila)
mm9_v1_chr5_-_144655875_144655935	0.0650412	CRX.p2	AK017053|Ankrd61|66729|ankyrin repeat domain 61	BC052346|Ankrd61|66729|ankyrin repeat domain 61	AK014929|Ankrd61|66729|ankyrin repeat domain 61	NM_025732|Ankrd61|66729|ankyrin repeat domain 61
mm9_v1_chr15_+_81494364_81494367	0.0648994	CRX.p2	AK132012|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK156236|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	NM_145993|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK036510|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr7_-_52781502_52781637	0.0646718	CRX.p2	BC138485|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	BC138486|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK154697|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	X51829|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK167317|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK079339|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK136336|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	NM_008654|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A
mm9_v1_chr18_-_35658485_35658600	0.064609	CRX.p2	BC028488|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AJ297884|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AK170415|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016466|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016119|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	NM_030749|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm9_v1_chr15_-_81877947_81878027	0.0644416	CRX.p2	BC083315|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK134943|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	BC026755|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	BC054450|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK004489|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK168930|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	U95114|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK168808|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK145608|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK169103|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK145391|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_011482|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
mm9_v1_chr2_-_104689616_104690006	0.0639047	CRX.p2	AK166405|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC115470|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK035530|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC099390|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK037087|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151011|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151019|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK038703|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_178695|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
mm9_v1_chr9_-_110018085_110018088	0.063779	CRX.p2	AB047557|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_133347|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC058331|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr3_+_137581582_137581604	0.0636486	CRX.p2	
mm9_v1_chr10_+_96945057_96945132	0.0630353	CRX.p2	BC132521|Dcn|13179|decorin	BC138564|Dcn|13179|decorin
mm9_v1_chr10_+_127525425_127525449	0.0626534	CRX.p2	AK003460|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr7_+_5035137_5035428	0.0623348	CRX.p2	BC046962|Epn1|13854|epsin 1
mm9_v1_chr18_+_37656644_37656807	0.0620592	CRX.p2	AK029163|Pcdhb19|93890|protocadherin beta 19	AK147520|Pcdhb19|93890|protocadherin beta 19	AK160654|Pcdhb19|93890|protocadherin beta 19	NM_053144|Pcdhb19|93890|protocadherin beta 19	AK046363|Pcdhb19|93890|protocadherin beta 19	BC141290|Pcdhb19|93890|protocadherin beta 19	BC141291|Pcdhb19|93890|protocadherin beta 19	AF326312|Pcdhb19|93890|protocadherin beta 19	AY013780|Pcdhb19|93890|protocadherin beta 19
mm9_v1_chr18_+_37649118_37649272	0.0620197	CRX.p2	AK140341|Pcdhb18|93889|protocadherin beta 18	NM_053143|Pcdhb18|93889|protocadherin beta 18	BC099958|Pcdhb18|93889|protocadherin beta 18	AY013779|Pcdhb18|93889|protocadherin beta 18
mm9_v1_chr14_-_79872206_79872215	0.0619888	CRX.p2	U40746|Wbp4|22380|WW domain binding protein 4
mm9_v1_chr7_+_31742368_31742427	0.060218	CRX.p2	AK154275|Lsr|54135|lipolysis stimulated lipoprotein receptor
mm9_v1_chr2_-_105234998_105235010	0.060178	CRX.p2	AK214949|Rcn1|19672|reticulocalbin 1
mm9_v1_chr12_+_34079718_34079950	0.0600721	CRX.p2	AK015697|Efcab10|75040|EF-hand calcium binding domain 10	BC099564|Efcab10|75040|EF-hand calcium binding domain 10	NM_029152|Efcab10|75040|EF-hand calcium binding domain 10	BC119387|Efcab10|75040|EF-hand calcium binding domain 10	BC120662|Efcab10|75040|EF-hand calcium binding domain 10
mm9_v1_chr15_+_98538624_98538661	0.0599394	CRX.p2	AK077174|Ccdc65|105833|coiled-coil domain containing 65	BC048073|Ccdc65|105833|coiled-coil domain containing 65	AF454432|Ccdc65|105833|coiled-coil domain containing 65	NM_153518|Ccdc65|105833|coiled-coil domain containing 65	BC056947|Ccdc65|105833|coiled-coil domain containing 65	BC060155|Ccdc65|105833|coiled-coil domain containing 65
mm9_v1_chr3_-_108248053_108248111	0.0599265	CRX.p2	AK077309|Sars|20226|seryl-aminoacyl-tRNA synthetase	BC008612|Sars|20226|seryl-aminoacyl-tRNA synthetase	BC031932|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK147825|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK082793|Sars|20226|seryl-aminoacyl-tRNA synthetase	NM_011319|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK028358|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK075827|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr13_-_67370003_67370074	0.0594556	CRX.p2	BC062958|Zfp458|238690|zinc finger protein 458	NM_001001152|Zfp458|238690|zinc finger protein 458
mm9_v1_chr9_+_59387443_59387536	0.0592432	CRX.p2	AK075911|Hexa|15211|hexosaminidase A	NM_010421|Hexa|15211|hexosaminidase A	AK168186|Hexa|15211|hexosaminidase A	AK159091|Hexa|15211|hexosaminidase A	U07631|Hexa|15211|hexosaminidase A	AK159814|Hexa|15211|hexosaminidase A	AK167013|Hexa|15211|hexosaminidase A	AK170903|Hexa|15211|hexosaminidase A	AK075895|Hexa|15211|hexosaminidase A	AK151960|Hexa|15211|hexosaminidase A	AK080777|Hexa|15211|hexosaminidase A	AK159890|Hexa|15211|hexosaminidase A	AK150444|Hexa|15211|hexosaminidase A	BC010755|Hexa|15211|hexosaminidase A	AK160112|Hexa|15211|hexosaminidase A	X64331|Hexa|15211|hexosaminidase A
mm9_v1_chr8_+_72696276_72696336	0.0584677	CRX.p2	AK032711|Tmem161a|234371|transmembrane protein 161A	AK082916|Tmem161a|234371|transmembrane protein 161A	AK049979|Tmem161a|234371|transmembrane protein 161A	NM_145597|Tmem161a|234371|transmembrane protein 161A	AK082758|Tmem161a|234371|transmembrane protein 161A	AK147962|Tmem161a|234371|transmembrane protein 161A	AK088569|Tmem161a|234371|transmembrane protein 161A	AK167517|Tmem161a|234371|transmembrane protein 161A	BC021367|Tmem161a|234371|transmembrane protein 161A
mm9_v1_chr7_+_133572567_133572631	0.0583891	CRX.p2	AK089938|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2	AK144836|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2	AK157832|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2
mm9_v1_chr5_+_74042618_74042624	0.0578123	CRX.p2	NM_178387|Spata18|73472|spermatogenesis associated 18	BC050799|Spata18|73472|spermatogenesis associated 18
mm9_v1_chr11_-_79344055_79344121	0.0575757	CRX.p2	AK046407|Evi2a|14017|ecotropic viral integration site 2a	BC038124|Evi2a|14017|ecotropic viral integration site 2a	AK170527|Evi2a|14017|ecotropic viral integration site 2a	AK005353|Evi2a|14017|ecotropic viral integration site 2a	NM_146023|Evi2b|216984|ecotropic viral integration site 2b	NM_001033711|Evi2a|14017|ecotropic viral integration site 2a	NM_010161|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr14_+_55082960_55083081	0.0573339	CRX.p2	AK144035|Lrp10|65107|low-density lipoprotein receptor-related protein 10	NM_022993|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK132169|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK170325|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC052378|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC054447|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AB042200|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr11_-_4987973_4988127	0.0567694	CRX.p2	AK178351|Ewsr1|14030|Ewing sarcoma breakpoint region 1
mm9_v1_chr11_-_120657647_120657730	0.0560957	CRX.p2	AK147967|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK037538|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK148307|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK088243|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	NM_026824|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)
mm9_v1_chr1_+_58643286_58643485	0.0560697	CRX.p2	BC028669|Ndufb3|66495|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	AK012320|Ndufb3|66495|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	NM_025597|Ndufb3|66495|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	AK138123|Ndufb3|66495|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	AK007930|Ndufb3|66495|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	BC036989|Ndufb3|66495|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	AK013608|Ndufb3|66495|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	AK009008|Ndufb3|66495|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3
mm9_v1_chr15_+_9265343_9265371	0.0559661	CRX.p2	AK052644|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	AK050128|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	NM_144845|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	BC022134|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	AK041045|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	BC034837|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2
mm9_v1_chr1_-_136700389_136700428	0.0558016	CRX.p2	AK035285|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm9_v1_chr11_-_97857486_97857496	0.0557158	CRX.p2	BC065791|Arl5c|217151|ADP-ribosylation factor-like 5C	NM_207231|Arl5c|217151|ADP-ribosylation factor-like 5C	AK171194|Arl5c|217151|ADP-ribosylation factor-like 5C
mm9_v1_chr1_+_101669228_101669341	0.0556891	CRX.p2	NM_172851|Cntnap5b|241175|contactin associated protein-like 5B
mm9_v1_chr5_+_116009475_116009502	0.0556772	CRX.p2	NM_007475|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr11_-_58136804_58136870	0.0555238	CRX.p2	BC034706|Zfp672|319475|zinc finger protein 672	AK019676|Zfp672|319475|zinc finger protein 672	AK085166|Zfp672|319475|zinc finger protein 672	AK008471|Zfp672|319475|zinc finger protein 672	AK035113|Zfp672|319475|zinc finger protein 672	NM_178761|Zfp672|319475|zinc finger protein 672
mm9_v1_chrX_-_133277456_133277461	0.0553542	CRX.p2	NM_001168227|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr18_-_35899651_35899795	0.0550885	CRX.p2	AK172314|Tmem173|72512|transmembrane protein 173
mm9_v1_chr6_+_71443871_71443920	0.0545071	CRX.p2	D76445|Rnf103|22644|ring finger protein 103	NM_009543|Rnf103|22644|ring finger protein 103	AK168644|Rnf103|22644|ring finger protein 103	AK146898|Rnf103|22644|ring finger protein 103
mm9_v1_chr3_+_51028368_51028391	0.0544755	CRX.p2	AK087790|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	NM_009834|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AF183960|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AK149340|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)
mm9_v1_chr7_-_87857062_87857123	0.05395	CRX.p2	
mm9_v1_chr14_+_58143613_58143864	0.0535764	CRX.p2	AK131917|Il17d|239114|interleukin 17D	NM_145837|Il17d|239114|interleukin 17D	AF458063|Il17d|239114|interleukin 17D
mm9_v1_chr7_+_127883556_127883560	0.0534589	CRX.p2	AK086942|Vwa3a|233813|von Willebrand factor A domain containing 3A	AK136898|Vwa3a|233813|von Willebrand factor A domain containing 3A
mm9_v1_chr13_+_54167169_54167276	0.0531896	CRX.p2	AK012650|Sfxn1|14057|sideroflexin 1	NM_027324|Sfxn1|14057|sideroflexin 1	AF325260|Sfxn1|14057|sideroflexin 1	BC005743|Sfxn1|14057|sideroflexin 1	AK151110|Sfxn1|14057|sideroflexin 1
mm9_v1_chr10_-_12581443_12581532	0.0530137	CRX.p2	Y12229|Utrn|22288|utrophin	NM_011682|Utrn|22288|utrophin
mm9_v1_chr11_+_3584631_3584687	0.0529162	CRX.p2	AK018377|Morc2a|74522|microrchidia 2A
mm9_v1_chr10_-_128241425_128241425	0.0529142	CRX.p2	BC037624|1110012D08Rik|73827|RIKEN cDNA 1110012D08 gene	NM_178066|1110012D08Rik|73827|RIKEN cDNA 1110012D08 gene
mm9_v1_chr5_-_124022937_124023057	0.0527345	CRX.p2	AK194964|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AF439858|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK019463|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK140553|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150282|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150550|Vps33a|77573|vacuolar protein sorting 33A (yeast)	BC046417|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK041982|Vps33a|77573|vacuolar protein sorting 33A (yeast)	NM_029929|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr11_-_3427914_3427958	0.0518462	CRX.p2	AK009426|Smtn|29856|smoothelin
mm9_v1_chr6_-_124729735_124729744	0.0518187	CRX.p2	NM_013588|Lrrc23|16977|leucine rich repeat containing 23	AK015011|Lrrc23|16977|leucine rich repeat containing 23	BC049601|Lrrc23|16977|leucine rich repeat containing 23
mm9_v1_chrX_-_73120485_73120524	0.0515664	CRX.p2	AK165540|Pls3|102866|plastin 3 (T-isoform)	NM_001166453|Pls3|102866|plastin 3 (T-isoform)
mm9_v1_chr13_-_53472719_53472729	0.0507998	CRX.p2	AK084445|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	X95641|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK079578|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	BC046323|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	NM_009269|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1
mm9_v1_chr13_+_93124680_93124737	0.0500995	CRX.p2	AK136212|Dhfr|13361|dihydrofolate reductase	NM_010049|Dhfr|13361|dihydrofolate reductase
mm9_v1_chr2_+_136716953_136716953	0.0497532	CRX.p2	AK010392|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	NM_028201|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr4_+_147932563_147932565	0.0495128	CRX.p2	AK168700|Exosc10|50912|exosome component 10
mm9_v1_chr16_-_88826362_88826389	0.0492784	CRX.p2	BC104263|Krtap14|23927|keratin associated protein 14	BC104262|Krtap14|23927|keratin associated protein 14	AF003691|Krtap14|23927|keratin associated protein 14	D85925|Krtap14|23927|keratin associated protein 14	NM_013707|Krtap14|23927|keratin associated protein 14
mm9_v1_chr11_+_101309725_101309821	0.0491908	CRX.p2	AK131884|Ifi35|70110|interferon-induced protein 35	NM_027320|Ifi35|70110|interferon-induced protein 35	AK008161|Ifi35|70110|interferon-induced protein 35	BC008158|Ifi35|70110|interferon-induced protein 35
mm9_v1_chr11_+_120534286_120534318	0.0491784	CRX.p2	NM_026877|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm9_v1_chr3_+_95965892_95965939	0.0490835	CRX.p2	NM_181409|Mtmr11|194126|myotubularin related protein 11	AK132375|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr10_-_70055559_70055571	0.0483646	CRX.p2	NM_001162846|Phyhipl|70911|phytanoyl-CoA hydroxylase interacting protein-like	AK014946|Phyhipl|70911|phytanoyl-CoA hydroxylase interacting protein-like
mm9_v1_chr5_+_33760994_33761117	0.048279	CRX.p2	AK084585|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene	AK163728|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene
mm9_v1_chr15_-_103278889_103278900	0.048267	CRX.p2	BC048502|BC048502|223927|cDNA sequence BC048502	NM_177631|BC048502|223927|cDNA sequence BC048502	AK131692|BC048502|223927|cDNA sequence BC048502
mm9_v1_chr3_-_87862384_87862439	0.0480232	CRX.p2	BC058362|Apoa1bp|246703|apolipoprotein A-I binding protein	AJ344092|Apoa1bp|246703|apolipoprotein A-I binding protein	AY566271|Apoa1bp|246703|apolipoprotein A-I binding protein	NM_144897|Apoa1bp|246703|apolipoprotein A-I binding protein	AK159846|Apoa1bp|246703|apolipoprotein A-I binding protein
mm9_v1_chr14_-_46277274_46277306	0.0479166	CRX.p2	AK048690|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr17_-_57184507_57184537	0.047854	CRX.p2	BC060049|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr19_+_5912952_5912986	0.0477416	CRX.p2	
mm9_v1_chr5_-_5694325_5694567	0.0477114	CRX.p2	BC043459|Steap2|74051|six transmembrane epithelial antigen of prostate 2	BC150881|Steap2|74051|six transmembrane epithelial antigen of prostate 2	BC150889|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK166162|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK052981|Steap2|74051|six transmembrane epithelial antigen of prostate 2	NM_028734|Steap2|74051|six transmembrane epithelial antigen of prostate 2
mm9_v1_chr15_-_76470334_76470408	0.0475678	CRX.p2	BC066068|Tonsl|72749|tonsoku-like, DNA repair protein	AK139173|Tonsl|72749|tonsoku-like, DNA repair protein	NM_183091|Tonsl|72749|tonsoku-like, DNA repair protein
mm9_v1_chr2_+_129442079_129442192	0.0474681	CRX.p2	AK195466|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr17_-_24592176_24592314	0.0466629	CRX.p2	BC005634|E4f1|13560|E4F transcription factor 1	AK144176|E4f1|13560|E4F transcription factor 1	BC031757|E4f1|13560|E4F transcription factor 1	AF126967|E4f1|13560|E4F transcription factor 1	AK033285|E4f1|13560|E4F transcription factor 1	NM_007893|E4f1|13560|E4F transcription factor 1	BC071228|E4f1|13560|E4F transcription factor 1	BC046459|E4f1|13560|E4F transcription factor 1
mm9_v1_chr8_+_124900561_124900686	0.0466266	CRX.p2	AK166802|Zc3h18|76014|zinc finger CCCH-type containing 18	AK031413|Zc3h18|76014|zinc finger CCCH-type containing 18	AK159881|Zc3h18|76014|zinc finger CCCH-type containing 18	BC003319|Zc3h18|76014|zinc finger CCCH-type containing 18
mm9_v1_chr11_-_73138102_73138139	0.046053	CRX.p2	BC024934|Aspa|11484|aspartoacylase	AK002859|Aspa|11484|aspartoacylase	AK008354|Aspa|11484|aspartoacylase	NM_023113|Aspa|11484|aspartoacylase
mm9_v1_chr13_+_55206653_55206695	0.0457587	CRX.p2	NM_012017|Zfp346|26919|zinc finger protein 346	AF083339|Zfp346|26919|zinc finger protein 346	BC055075|Zfp346|26919|zinc finger protein 346
mm9_v1_chr5_-_101001209_101001243	0.0455792	CRX.p2	AF263458|Plac8|231507|placenta-specific 8	AK007369|Plac8|231507|placenta-specific 8	NM_139198|Plac8|231507|placenta-specific 8	AJ422151|Plac8|231507|placenta-specific 8
mm9_v1_chr7_+_6315986_6316086	0.0453555	CRX.p2	AK134974|Zfp78|330463|zinc finger protein 78	NM_001025163|Zfp78|330463|zinc finger protein 78	NM_001112805|Zfp78|330463|zinc finger protein 78	NM_177888|Zfp78|330463|zinc finger protein 78	AK163133|Zfp78|330463|zinc finger protein 78	BC085322|Zfp78|330463|zinc finger protein 78	AK039658|Zfp78|330463|zinc finger protein 78	AK173164|Zfp78|330463|zinc finger protein 78
mm9_v1_chr2_+_121782185_121782265	0.0452042	CRX.p2	AK033382|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	NM_212450|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK169248|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK044805|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK053513|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC066219|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK030085|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK041422|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK049463|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK160431|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC052660|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm9_v1_chr7_-_127038916_127038971	0.0449816	CRX.p2	AK029043|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	NM_173408|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm9_v1_chr11_+_68829412_68829631	0.0449736	CRX.p2	NM_001013256|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	NM_001143790|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	BC072625|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	BC066078|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK145919|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK165906|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	BC147495|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	BC147497|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK044055|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK030876|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK038651|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene
mm9_v1_chr15_+_10107168_10107535	0.0445559	CRX.p2	AK054381|Prlr|19116|prolactin receptor	AK143335|Prlr|19116|prolactin receptor	AK050317|Prlr|19116|prolactin receptor	BC005555|Prlr|19116|prolactin receptor	BC006652|Prlr|19116|prolactin receptor	AK081676|Prlr|19116|prolactin receptor
mm9_v1_chrM_-_14069_14070	0.0442236	CRX.p2	AK138272|ND6|17722|NADH dehydrogenase subunit 6	AK140300|ND6|17722|NADH dehydrogenase subunit 6
mm9_v1_chr11_+_54683866_54683920	0.0440582	CRX.p2	
mm9_v1_chr9_-_64062342_64062398	0.0440073	CRX.p2	AK165664|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr17_+_46297980_46297995	0.0439276	CRX.p2	NM_001145979|Gtpbp2|56055|GTP binding protein 2	NM_019581|Gtpbp2|56055|GTP binding protein 2
mm9_v1_chr2_+_26442112_26442158	0.0437449	CRX.p2	NM_001164564|Egfl7|353156|EGF-like domain 7	AK139377|Egfl7|353156|EGF-like domain 7
mm9_v1_chr7_-_134158053_134158131	0.0437309	CRX.p2	BC006709|Mvp|78388|major vault protein	AK167899|Mvp|78388|major vault protein	AK168100|Mvp|78388|major vault protein	AK152534|Mvp|78388|major vault protein	AK088046|Mvp|78388|major vault protein	AF210456|Mvp|78388|major vault protein	NM_080638|Mvp|78388|major vault protein
mm9_v1_chr1_-_174128558_174128619	0.0436739	CRX.p2	BC092079|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr10_+_89207730_89207982	0.043568	CRX.p2	AK141050|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	NM_029166|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AB093261|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	BC030383|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK033300|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	BC132134|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	BC138092|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK087280|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like
mm9_v1_chr1_-_83035005_83035022	0.0430159	CRX.p2	BC109154|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	BC109155|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	AK098112|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	AF271634|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	NM_030556|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3
mm9_v1_chr9_-_39380841_39380898	0.0428118	CRX.p2	NM_146508|Olfr959|258501|olfactory receptor 959	BC120617|Olfr959|258501|olfactory receptor 959	BC120619|Olfr959|258501|olfactory receptor 959
mm9_v1_chrX_+_97170927_97171053	0.0423024	CRX.p2	AK028502|Eda|13607|ectodysplasin-A	AF016627|Eda|13607|ectodysplasin-A	AF016628|Eda|13607|ectodysplasin-A	AF016629|Eda|13607|ectodysplasin-A	AF016630|Eda|13607|ectodysplasin-A	DQ168876|Eda|13607|ectodysplasin-A	DQ168877|Eda|13607|ectodysplasin-A	DQ168878|Eda|13607|ectodysplasin-A	DQ168879|Eda|13607|ectodysplasin-A	DQ168880|Eda|13607|ectodysplasin-A	DQ168881|Eda|13607|ectodysplasin-A	NM_001177937|Eda|13607|ectodysplasin-A	NM_001177938|Eda|13607|ectodysplasin-A	NM_001177939|Eda|13607|ectodysplasin-A	NM_001177940|Eda|13607|ectodysplasin-A	NM_001177941|Eda|13607|ectodysplasin-A	NM_001177942|Eda|13607|ectodysplasin-A	NM_001177943|Eda|13607|ectodysplasin-A	NM_001177944|Eda|13607|ectodysplasin-A	NM_010099|Eda|13607|ectodysplasin-A	AF016631|Eda|13607|ectodysplasin-A	AJ243657|Eda|13607|ectodysplasin-A	AK040754|Eda|13607|ectodysplasin-A	AF004435|Eda|13607|ectodysplasin-A	AJ243658|Eda|13607|ectodysplasin-A	AK137551|Eda|13607|ectodysplasin-A	BC125387|Eda|13607|ectodysplasin-A	BC144790|Eda|13607|ectodysplasin-A	BC144791|Eda|13607|ectodysplasin-A
mm9_v1_chr11_+_70246079_70246238	0.0420782	CRX.p2	AK150389|Arrb2|216869|arrestin, beta 2	AK170647|Arrb2|216869|arrestin, beta 2	AK089542|Arrb2|216869|arrestin, beta 2	AK162889|Arrb2|216869|arrestin, beta 2	AK159317|Arrb2|216869|arrestin, beta 2	NM_145429|Arrb2|216869|arrestin, beta 2	AK154874|Arrb2|216869|arrestin, beta 2	AK170889|Arrb2|216869|arrestin, beta 2	BC016642|Arrb2|216869|arrestin, beta 2
mm9_v1_chr4_+_140528820_140528899	0.0419953	CRX.p2	AF095936|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	AK190493|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
mm9_v1_chr19_-_18655597_18655704	0.0416843	CRX.p2	AK205236|Ostf1|20409|osteoclast stimulating factor 1	AK207431|Ostf1|20409|osteoclast stimulating factor 1	AK209921|Ostf1|20409|osteoclast stimulating factor 1
mm9_v1_chr4_-_108311676_108311740	0.0414785	CRX.p2	
mm9_v1_chr10_-_80024245_80024324	0.0411268	CRX.p2	BC039623|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC011438|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC069964|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC054843|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC025511|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK173108|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK012127|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK087016|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC052424|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK144769|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	NM_025852|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)
mm9_v1_chr17_+_28450461_28450474	0.0409947	CRX.p2	NM_001163819|Fance|72775|Fanconi anemia, complementation group E	NM_001163820|Fance|72775|Fanconi anemia, complementation group E
mm9_v1_chr13_+_3537514_3537611	0.0404409	CRX.p2	L36314|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr7_+_138554180_138554255	0.0402985	CRX.p2	BC044826|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK004889|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK076535|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK152325|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	BC011235|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	BC035231|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain
mm9_v1_chr1_+_136327630_136327750	0.0400991	CRX.p2	
mm9_v1_chr11_-_95574067_95574079	0.039918	CRX.p2	AK027957|1110035M17Rik|432396|RIKEN cDNA 1110035M17 gene
mm9_v1_chr15_+_75427044_75427088	0.0397986	CRX.p2	AK003305|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	AB095543|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	AK050431|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	BC061225|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	NM_026730|Gpihbp1|68453|GPI-anchored HDL-binding protein 1
mm9_v1_chr19_+_46227052_46227083	0.0397385	CRX.p2	BC082336|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	AK019933|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	BC011335|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr9_-_65402264_65402343	0.039567	CRX.p2	
mm9_v1_chr5_+_31252402_31252480	0.0394763	CRX.p2	AF189764|Abhd1|57742|abhydrolase domain containing 1	AK156413|Abhd1|57742|abhydrolase domain containing 1	AK162873|Abhd1|57742|abhydrolase domain containing 1	BC013505|Abhd1|57742|abhydrolase domain containing 1	NM_021304|Abhd1|57742|abhydrolase domain containing 1
mm9_v1_chr3_+_20008792_20008792	0.0392956	CRX.p2	BC039796|Hltf|20585|helicase-like transcription factor
mm9_v1_chr10_+_127526038_127526102	0.038524	CRX.p2	BC018392|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK183981|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198015|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198554|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK200200|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK205830|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212143|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK178407|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK182340|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK189215|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK190147|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK191197|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK192149|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198620|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK202885|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK215685|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216714|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217489|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK195031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK196936|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198338|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr12_+_85702917_85702967	0.0381021	CRX.p2	BC132168|Coq6|217707|coenzyme Q6 homolog (yeast)	BC132170|Coq6|217707|coenzyme Q6 homolog (yeast)	NM_172582|Coq6|217707|coenzyme Q6 homolog (yeast)	BC088736|Coq6|217707|coenzyme Q6 homolog (yeast)	AK131889|Coq6|217707|coenzyme Q6 homolog (yeast)
mm9_v1_chr16_-_38341927_38341945	0.0380697	CRX.p2	AK077038|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene	NM_001081025|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene
mm9_v1_chr11_-_70034477_70034547	0.0377876	CRX.p2	AK028143|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13	AK028759|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13	NM_172371|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm9_v1_chr16_+_91270319_91270415	0.037613	CRX.p2	AK158791|Olig1|50914|oligodendrocyte transcription factor 1
mm9_v1_chr19_-_46470175_46470258	0.0375249	CRX.p2	BC007131|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK010632|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AB010297|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_016860|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK019518|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK168889|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK088062|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK167450|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK162248|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
mm9_v1_chr7_-_16844541_16844615	0.0372988	CRX.p2	AK158027|C5ar1|12273|complement component 5a receptor 1
mm9_v1_chr9_+_13632152_13632249	0.0371982	CRX.p2	AK145026|Fam76b|72826|family with sequence similarity 76, member B	BC043120|Fam76b|72826|family with sequence similarity 76, member B	NM_176836|Fam76b|72826|family with sequence similarity 76, member B	AK052430|Fam76b|72826|family with sequence similarity 76, member B	BC050870|Fam76b|72826|family with sequence similarity 76, member B
mm9_v1_chr15_+_81494368_81494374	0.0368208	CRX.p2	AK029115|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr7_-_50788445_50788507	0.0367729	CRX.p2	AK089205|Cd33|12489|CD33 antigen	AK155745|Cd33|12489|CD33 antigen	S71345|Cd33|12489|CD33 antigen	S71403|Cd33|12489|CD33 antigen	AK170937|Cd33|12489|CD33 antigen
mm9_v1_chr13_-_69878721_69878801	0.036207	CRX.p2	NM_001145162|Ube2ql1|76980|ubiquitin-conjugating enzyme E2Q family-like 1
mm9_v1_chr13_-_67710581_67710643	0.03606	CRX.p2	AK170565|AA987161|380856|expressed sequence AA987161	BC047145|AA987161|380856|expressed sequence AA987161	AK137425|AA987161|380856|expressed sequence AA987161
mm9_v1_chr18_+_57693433_57693535	0.0359345	CRX.p2	AK005868|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene	NM_029290|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene	BC048576|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene	AK019826|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene
mm9_v1_chr9_+_50425460_50425487	0.0356342	CRX.p2	BC019481|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr5_+_22988226_22988243	0.0350546	CRX.p2	
mm9_v1_chr19_-_34736879_34736908	0.0350352	CRX.p2	AK090072|Gm14446|667373|predicted gene 14446
mm9_v1_chr17_+_26852700_26852741	0.0347153	CRX.p2	BC113191|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	BC113192|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr7_-_108112785_108112972	0.0346597	CRX.p2	AX775901|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	BC064095|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	BC027331|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK008436|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK008496|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	NM_183168|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK142680|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6
mm9_v1_chr7_-_4116102_4116147	0.0344615	CRX.p2	AF102773|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5	AF164119|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5	BC006758|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5
mm9_v1_chr17_+_71168939_71168940	0.0344568	CRX.p2	AK034215|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr3_+_142364014_142364083	0.03433	CRX.p2	AK145623|Ccbl2|229905|cysteine conjugate-beta lyase 2	AF363737|Ccbl2|229905|cysteine conjugate-beta lyase 2	AK049569|Ccbl2|229905|cysteine conjugate-beta lyase 2	NM_173763|Ccbl2|229905|cysteine conjugate-beta lyase 2	BC085287|Ccbl2|229905|cysteine conjugate-beta lyase 2
mm9_v1_chr3_+_19857375_19857397	0.0340925	CRX.p2	AK033842|Cp|12870|ceruloplasmin
mm9_v1_chr2_-_120346171_120346284	0.0340841	CRX.p2	AF060245|Zfp106|20402|zinc finger protein 106	AK029313|Zfp106|20402|zinc finger protein 106
mm9_v1_chr12_+_78576551_78576710	0.0340189	CRX.p2	AK188352|Fut8|53618|fucosyltransferase 8	AK210295|Fut8|53618|fucosyltransferase 8	AK216622|Fut8|53618|fucosyltransferase 8
mm9_v1_chr13_-_106084378_106084564	0.0338098	CRX.p2	AK157911|Rnf180|71816|ring finger protein 180	AK032259|Rnf180|71816|ring finger protein 180	AK151379|Rnf180|71816|ring finger protein 180	AK152404|Rnf180|71816|ring finger protein 180	BC046775|Rnf180|71816|ring finger protein 180	BC075700|Rnf180|71816|ring finger protein 180
mm9_v1_chr3_+_95965959_95965978	0.0336702	CRX.p2	BC051083|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chrX_+_7274259_7274353	0.0334348	CRX.p2	NM_173747|Gpkow|209416|G patch domain and KOW motifs	AK017864|Gpkow|209416|G patch domain and KOW motifs	AK144167|Gpkow|209416|G patch domain and KOW motifs	AK028433|Gpkow|209416|G patch domain and KOW motifs	BC092224|Gpkow|209416|G patch domain and KOW motifs
mm9_v1_chr13_+_33119282_33119422	0.0329609	CRX.p2	AK005491|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	NM_011452|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	U96705|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK167563|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK171850|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	BC064768|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b
mm9_v1_chr15_+_8918001_8918118	0.0329007	CRX.p2	AK048152|Ranbp3l|223332|RAN binding protein 3-like	AK132406|Ranbp3l|223332|RAN binding protein 3-like	BC058706|Ranbp3l|223332|RAN binding protein 3-like	NM_198024|Ranbp3l|223332|RAN binding protein 3-like
mm9_v1_chr4_+_155079153_155079290	0.0328608	CRX.p2	AK148131|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	AK004446|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	AK005220|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	BC016544|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm9_v1_chr11_+_75578548_75578573	0.0326079	CRX.p2	AK204716|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK199717|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr7_-_134351860_134352145	0.0323276	CRX.p2	AK047320|Tbc1d10b|68449|TBC1 domain family, member 10b	AK047327|Tbc1d10b|68449|TBC1 domain family, member 10b	NM_144522|Tbc1d10b|68449|TBC1 domain family, member 10b
mm9_v1_chr2_-_113057189_113057202	0.0316776	CRX.p2	BC116740|Ryr3|20192|ryanodine receptor 3	BC116742|Ryr3|20192|ryanodine receptor 3	BC144719|Ryr3|20192|ryanodine receptor 3
mm9_v1_chr15_+_81494375_81494386	0.0316103	CRX.p2	AK145560|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237000|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237001|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237002|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr2_-_25052129_25052179	0.0315675	CRX.p2	AK154508|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK043559|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK082899|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK172142|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK171551|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene
mm9_v1_chr5_+_90919758_90919765	0.0304867	CRX.p2	AK075972|Afp|11576|alpha fetoprotein	AK076197|Afp|11576|alpha fetoprotein	AK146513|Afp|11576|alpha fetoprotein	AK146524|Afp|11576|alpha fetoprotein	AK168426|Afp|11576|alpha fetoprotein	AK168574|Afp|11576|alpha fetoprotein	AK168751|Afp|11576|alpha fetoprotein	AK169046|Afp|11576|alpha fetoprotein	AK169054|Afp|11576|alpha fetoprotein	AK010934|Afp|11576|alpha fetoprotein	AK076053|Afp|11576|alpha fetoprotein	AK145975|Afp|11576|alpha fetoprotein	AK168576|Afp|11576|alpha fetoprotein	AK168883|Afp|11576|alpha fetoprotein	AK169147|Afp|11576|alpha fetoprotein	AK167549|Afp|11576|alpha fetoprotein	V00743|Afp|11576|alpha fetoprotein
mm9_v1_chr12_+_25183430_25183496	0.0304468	CRX.p2	NM_020614|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC057167|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	AK165580|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	AK131963|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	AK015111|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC019993|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC086643|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	AK170313|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC069907|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC094035|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC125027|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	BC125028|Taf1b|21340|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B
mm9_v1_chr13_-_67585160_67585193	0.0303345	CRX.p2	AK137581|Zfp874b|408067|zinc finger protein 874b	NM_001076791|Zfp874b|408067|zinc finger protein 874b	AK079330|Zfp874b|408067|zinc finger protein 874b
mm9_v1_chr2_-_65201979_65202090	0.0303176	CRX.p2	AK041015|Slc38a11|320106|solute carrier family 38, member 11	AK139966|Slc38a11|320106|solute carrier family 38, member 11	NM_177074|Slc38a11|320106|solute carrier family 38, member 11	AK034126|Slc38a11|320106|solute carrier family 38, member 11	AK043610|Slc38a11|320106|solute carrier family 38, member 11
mm9_v1_chr18_+_32584590_32584594	0.0296655	CRX.p2	AK184020|Bin1|30948|bridging integrator 1	AK191982|Bin1|30948|bridging integrator 1
mm9_v1_chr16_+_92086695_92086827	0.0296489	CRX.p2	AK133105|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3
mm9_v1_chr14_-_70132309_70132386	0.0295194	CRX.p2	BC024115|Chmp7|105513|CHMP family, member 7	BC033365|Chmp7|105513|CHMP family, member 7	NM_134078|Chmp7|105513|CHMP family, member 7
mm9_v1_chr11_+_58791616_58791669	0.029487	CRX.p2	BC020102|Trim11|94091|tripartite motif-containing 11	AF220124|Trim11|94091|tripartite motif-containing 11	NM_053168|Trim11|94091|tripartite motif-containing 11	AK170656|Trim11|94091|tripartite motif-containing 11	AK051266|Trim11|94091|tripartite motif-containing 11
mm9_v1_chr12_+_59312790_59312790	0.0294621	CRX.p2	AK046464|Sstr1|20605|somatostatin receptor 1	NM_009216|Sstr1|20605|somatostatin receptor 1
mm9_v1_chr14_-_122364309_122364416	0.029413	CRX.p2	BC052868|Gpr183|321019|G protein-coupled receptor 183	AK141593|Gpr183|321019|G protein-coupled receptor 183	AK153216|Gpr183|321019|G protein-coupled receptor 183	AK087951|Gpr183|321019|G protein-coupled receptor 183	AK156005|Gpr183|321019|G protein-coupled receptor 183	AK156289|Gpr183|321019|G protein-coupled receptor 183	NM_183031|Gpr183|321019|G protein-coupled receptor 183	AK138693|Gpr183|321019|G protein-coupled receptor 183
mm9_v1_chr18_+_35750071_35750097	0.029356	CRX.p2	AK166063|Matr3|17184|matrin 3
mm9_v1_chr1_+_140864297_140864301	0.029149	CRX.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr15_-_36700634_36700638	0.0288505	CRX.p2	AK003664|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr11_+_66838648_66838688	0.0286562	CRX.p2	AK043094|Tmem220|338369|transmembrane protein 220	BC110628|Tmem220|338369|transmembrane protein 220	BC110629|Tmem220|338369|transmembrane protein 220	NM_177392|Tmem220|338369|transmembrane protein 220	AK078505|Tmem220|338369|transmembrane protein 220
mm9_v1_chr8_-_112132276_112132319	0.0283136	CRX.p2	AF029667|Dhodh|56749|dihydroorotate dehydrogenase	BC019542|Dhodh|56749|dihydroorotate dehydrogenase	AK088863|Dhodh|56749|dihydroorotate dehydrogenase	AK149350|Dhodh|56749|dihydroorotate dehydrogenase
mm9_v1_chr5_-_86539474_86539529	0.0280372	CRX.p2	AK017687|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr16_+_59471600_59471691	0.0278502	CRX.p2	NM_025910|Mina|67014|myc induced nuclear antigen	AK007810|Mina|67014|myc induced nuclear antigen	AK032595|Mina|67014|myc induced nuclear antigen	AK013451|Mina|67014|myc induced nuclear antigen	AK014426|Mina|67014|myc induced nuclear antigen	AK019117|Mina|67014|myc induced nuclear antigen	AK031671|Mina|67014|myc induced nuclear antigen	BC025109|Mina|67014|myc induced nuclear antigen	BC058242|Mina|67014|myc induced nuclear antigen
mm9_v1_chr8_-_87368790_87368860	0.0276606	CRX.p2	
mm9_v1_chr1_-_163718415_163718625	0.0274161	CRX.p2	AF288572|Fasl|14103|Fas ligand (TNF superfamily, member 6)	DQ846747|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U58995|Fasl|14103|Fas ligand (TNF superfamily, member 6)	S76752|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AF119335|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U06948|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U10984|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK141268|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK040139|Fasl|14103|Fas ligand (TNF superfamily, member 6)	NM_010177|Fasl|14103|Fas ligand (TNF superfamily, member 6)
mm9_v1_chr5_-_109985883_109985911	0.0272641	CRX.p2	AK170466|Crlf2|57914|cytokine receptor-like factor 2
mm9_v1_chr8_+_26830853_26830927	0.0270436	CRX.p2	AK007542|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC039626|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B
mm9_v1_chr5_-_100812885_100812885	0.026927	CRX.p2	BC054358|Sec31a|69162|Sec31 homolog A (S. cerevisiae)
mm9_v1_chr11_+_54683756_54683778	0.0269118	CRX.p2	
mm9_v1_chr7_-_133709900_133709929	0.0264691	CRX.p2	BC025032|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK013160|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK009925|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK088076|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK166743|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C
mm9_v1_chr11_+_87861245_87861263	0.0263304	CRX.p2	X66091|Srsf1|110809|serine/arginine-rich splicing factor 1
mm9_v1_chr8_+_32239179_32239274	0.0263134	CRX.p2	AK004356|Rnf122|68867|ring finger protein 122
mm9_v1_chr2_+_181287207_181287250	0.0254609	CRX.p2	AK135001|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5
mm9_v1_chr18_+_85020800_85020860	0.0249737	CRX.p2	BC024341|Cyb5|109672|cytochrome b-5	AK002426|Cyb5|109672|cytochrome b-5	AK013210|Cyb5|109672|cytochrome b-5	NM_025797|Cyb5|109672|cytochrome b-5
mm9_v1_chr2_+_144419797_144419818	0.0248011	CRX.p2	AK002610|Gm561|228715|predicted gene 561	NM_001033297|Gm561|228715|predicted gene 561	BC147042|Gm561|228715|predicted gene 561	BC147043|Gm561|228715|predicted gene 561	AK010324|Gm561|228715|predicted gene 561
mm9_v1_chr7_-_67285104_67285104	0.0246632	CRX.p2	NM_001082962|Snrpn|20646|small nuclear ribonucleoprotein N
mm9_v1_chr4_-_44079664_44079905	0.0237317	CRX.p2	AK199019|Gne|50798|glucosamine	AJ132236|Gne|50798|glucosamine
mm9_v1_chr10_+_77060408_77060810	0.0235407	CRX.p2	AK177209|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK190939|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK200019|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK204685|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK217718|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK190184|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK216585|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK191037|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK192116|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK202715|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK209759|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK211153|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK216317|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein
mm9_v1_chr3_-_135271220_135271233	0.0232782	CRX.p2	L28117|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr10_+_80289424_80289427	0.0232617	CRX.p2	AK087942|Oaz1|18245|ornithine decarboxylase antizyme 1
mm9_v1_chrX_-_147779368_147779423	0.0232087	CRX.p2	AK038885|A230072E10Rik|331547|RIKEN cDNA A230072E10 gene	BC025887|A230072E10Rik|331547|RIKEN cDNA A230072E10 gene
mm9_v1_chr3_-_8964045_8964059	0.0231508	CRX.p2	AY048852|Tpd52|21985|tumor protein D52	NM_001025261|Tpd52|21985|tumor protein D52	NM_001025262|Tpd52|21985|tumor protein D52
mm9_v1_chr11_+_119464218_119464296	0.0227742	CRX.p2	AK161011|Rptor|74370|regulatory associated protein of MTOR, complex 1
mm9_v1_chr7_+_114738564_114738564	0.0225837	CRX.p2	NM_008905|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm9_v1_chr7_+_29572956_29573056	0.0224764	CRX.p2	AK187075|Sirt2|64383|sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae)
mm9_v1_chr4_-_132313025_132313152	0.022476	CRX.p2	AK166253|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	BC009087|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	NM_133888|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	AK154599|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B
mm9_v1_chr5_+_104864146_104864160	0.0214398	CRX.p2	BC020355|Spp1|20750|secreted phosphoprotein 1	BC029991|Spp1|20750|secreted phosphoprotein 1	BC057858|Spp1|20750|secreted phosphoprotein 1	BC002113|Spp1|20750|secreted phosphoprotein 1	BC080720|Spp1|20750|secreted phosphoprotein 1	J04806|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr10_+_23908526_23908598	0.0213947	CRX.p2	AK198523|Stx7|53331|syntaxin 7
mm9_v1_chr12_-_112127299_112127357	0.0211058	CRX.p2	BC021867|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK004355|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK076126|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK160662|Cinp|67236|cyclin-dependent kinase 2 interacting protein	NM_026048|Cinp|67236|cyclin-dependent kinase 2 interacting protein	BC011066|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK007812|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK032155|Cinp|67236|cyclin-dependent kinase 2 interacting protein
mm9_v1_chr7_-_17595240_17595330	0.0210693	CRX.p2	
mm9_v1_chr6_+_97160736_97160744	0.0210068	CRX.p2	D87211|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chr13_+_24895094_24895151	0.0208089	CRX.p2	BC002217|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr9_+_121807578_121807589	0.0200327	CRX.p2	AK028281|Ccbp2|59289|chemokine binding protein 2	AK147166|Ccbp2|59289|chemokine binding protein 2	NM_021609|Ccbp2|59289|chemokine binding protein 2	AK145960|Ccbp2|59289|chemokine binding protein 2
mm9_v1_chr13_-_67407347_67407402	0.0198478	CRX.p2	NM_001003666|Zfp457|431706|zinc finger protein 457
mm9_v1_chr4_-_41261815_41261871	0.0198449	CRX.p2	AK087517|Dcaf12|68970|DDB1 and CUL4 associated factor 12	BC023852|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK083369|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK031089|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr10_+_127764070_127764180	0.0196565	CRX.p2	
mm9_v1_chr19_-_44471675_44471892	0.0196277	CRX.p2	AK012370|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chrX_-_140367467_140367853	0.019407	CRX.p2	AY560329|Dcx|13193|doublecortin	AK048410|Dcx|13193|doublecortin	AF045547|Dcx|13193|doublecortin	AK164119|Dcx|13193|doublecortin	BC056391|Dcx|13193|doublecortin	AK049050|Dcx|13193|doublecortin	NM_001110222|Dcx|13193|doublecortin	BC057010|Dcx|13193|doublecortin	BC062974|Dcx|13193|doublecortin	AK014264|Dcx|13193|doublecortin	NM_001110223|Dcx|13193|doublecortin	NM_001110224|Dcx|13193|doublecortin	NM_010025|Dcx|13193|doublecortin	AB011678|Dcx|13193|doublecortin
mm9_v1_chr10_-_60227439_60227519	0.0193431	CRX.p2	AK084569|Unc5b|107449|unc-5 homolog B (C. elegans)	AK041547|Unc5b|107449|unc-5 homolog B (C. elegans)	AK159205|Unc5b|107449|unc-5 homolog B (C. elegans)
mm9_v1_chr19_-_5366600_5366664	0.0190945	CRX.p2	AB025349|Banf1|23825|barrier to autointegration factor 1	AK088896|Banf1|23825|barrier to autointegration factor 1	AK004212|Banf1|23825|barrier to autointegration factor 1	AK012588|Banf1|23825|barrier to autointegration factor 1	BC003709|Banf1|23825|barrier to autointegration factor 1	NM_011793|Banf1|23825|barrier to autointegration factor 1	AK003025|Banf1|23825|barrier to autointegration factor 1	AK011079|Banf1|23825|barrier to autointegration factor 1	AK011100|Banf1|23825|barrier to autointegration factor 1	AK168039|Banf1|23825|barrier to autointegration factor 1
mm9_v1_chr8_-_74967581_74967676	0.0190455	CRX.p2	AB206786|Calr3|73316|calreticulin 3	AK006582|Calr3|73316|calreticulin 3	NM_028500|Calr3|73316|calreticulin 3
mm9_v1_chr12_+_25336138_25336389	0.0188335	CRX.p2	AK038397|Klf11|194655|Kruppel-like factor 11	AK050156|Klf11|194655|Kruppel-like factor 11	NM_178357|Klf11|194655|Kruppel-like factor 11	BC060642|Klf11|194655|Kruppel-like factor 11	AK161233|Klf11|194655|Kruppel-like factor 11	AK082838|Klf11|194655|Kruppel-like factor 11	AK036618|Klf11|194655|Kruppel-like factor 11	AK089044|Klf11|194655|Kruppel-like factor 11	AK084913|Klf11|194655|Kruppel-like factor 11	AK085319|Klf11|194655|Kruppel-like factor 11	AK054170|Klf11|194655|Kruppel-like factor 11	AJ459773|Klf11|194655|Kruppel-like factor 11
mm9_v1_chr19_-_4007587_4007601	0.0184413	CRX.p2	
mm9_v1_chr2_+_69708777_69708824	0.0183502	CRX.p2	AK200405|Ssb|20823|Sjogren syndrome antigen B
mm9_v1_chr11_+_95528269_95528342	0.0179268	CRX.p2	NM_008831|Phb|18673|prohibitin	AK178178|Phb|18673|prohibitin	AK168248|Phb|18673|prohibitin	AK002714|Phb|18673|prohibitin	AK152933|Phb|18673|prohibitin	AK150956|Phb|18673|prohibitin	AK151073|Phb|18673|prohibitin	AK010619|Phb|18673|prohibitin	AK160490|Phb|18673|prohibitin	AK168656|Phb|18673|prohibitin	X78682|Phb|18673|prohibitin
mm9_v1_chr1_-_75178465_75178492	0.0178918	CRX.p2	
mm9_v1_chr13_-_53472732_53472776	0.0172495	CRX.p2	AK084391|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AF003823|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK089030|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK053207|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK028713|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK161140|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1
mm9_v1_chr18_-_62915799_62916000	0.0172323	CRX.p2	BC072581|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK012381|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK020725|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene
mm9_v1_chr17_+_34784077_34784176	0.0168661	CRX.p2	BC013534|Atf6b|12915|activating transcription factor 6 beta	AK146671|Atf6b|12915|activating transcription factor 6 beta	NM_017406|Atf6b|12915|activating transcription factor 6 beta	AK090378|Atf6b|12915|activating transcription factor 6 beta	BC052635|Atf6b|12915|activating transcription factor 6 beta	AK159169|Atf6b|12915|activating transcription factor 6 beta	AK170027|Atf6b|12915|activating transcription factor 6 beta	AK143765|Atf6b|12915|activating transcription factor 6 beta
mm9_v1_chr11_+_82878590_82878700	0.0167138	CRX.p2	AF099973|Slfn2|20556|schlafen 2	NM_011408|Slfn2|20556|schlafen 2	BC138749|Slfn2|20556|schlafen 2	BC138750|Slfn2|20556|schlafen 2
mm9_v1_chr6_-_136121885_136121906	0.0163003	CRX.p2	AK163195|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm9_v1_chr17_-_33961403_33961506	0.0161484	CRX.p2	U11248|Rps28|54127|ribosomal protein S28	BC010987|Rps28|54127|ribosomal protein S28	AK002919|Rps28|54127|ribosomal protein S28	BC090982|Rps28|54127|ribosomal protein S28	NM_016844|Rps28|54127|ribosomal protein S28	BC125644|Rps28|54127|ribosomal protein S28	BC125646|Rps28|54127|ribosomal protein S28
mm9_v1_chr4_-_41261905_41261949	0.0161158	CRX.p2	NM_026893|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr17_-_85461840_85461859	0.0158498	CRX.p2	AK019367|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr5_-_111209468_111209636	0.0158409	CRX.p2	BC021446|Pus1|56361|pseudouridine synthase 1	BC034359|Pus1|56361|pseudouridine synthase 1	AB041563|Pus1|56361|pseudouridine synthase 1	AK089258|Pus1|56361|pseudouridine synthase 1	NM_001025561|Pus1|56361|pseudouridine synthase 1	NM_019700|Pus1|56361|pseudouridine synthase 1	NM_001025562|Pus1|56361|pseudouridine synthase 1	AK161521|Pus1|56361|pseudouridine synthase 1
mm9_v1_chr17_+_24544500_24544654	0.0158407	CRX.p2	BC049911|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	BC056614|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr17_+_26698421_26698560	0.0157177	CRX.p2	BC005516|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	NM_026170|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK173123|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK003239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK088157|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK004629|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK151239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK084385|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	BC083144|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AB093571|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	CT010230|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chrX_-_75336699_75336712	0.0157068	CRX.p2	BC125514|Obp1a|18249|odorant binding protein Ia	BC125516|Obp1a|18249|odorant binding protein Ia	AK017455|Obp1a|18249|odorant binding protein Ia	NM_008754|Obp1a|18249|odorant binding protein Ia
mm9_v1_chr4_+_147932566_147932571	0.0154635	CRX.p2	AF091392|Exosc10|50912|exosome component 10	AK162887|Exosc10|50912|exosome component 10	AK017621|Exosc10|50912|exosome component 10	BC027840|Exosc10|50912|exosome component 10
mm9_v1_chr12_+_88488104_88488148	0.0152433	CRX.p2	AB041613|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr2_-_66278870_66278908	0.0147237	CRX.p2	AK046001|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	AK134744|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	NM_018733|Scn1a|20265|sodium channel, voltage-gated, type I, alpha
mm9_v1_chr12_-_81269174_81269180	0.0146004	CRX.p2	AK037382|Actn1|109711|actinin, alpha 1
mm9_v1_chr12_-_70825850_70825878	0.0145922	CRX.p2	AK145228|L2hgdh|217666|L-2-hydroxyglutarate dehydrogenase	NM_145443|L2hgdh|217666|L-2-hydroxyglutarate dehydrogenase
mm9_v1_chr4_+_147932513_147932557	0.0143343	CRX.p2	NM_016699|Exosc10|50912|exosome component 10	AK081014|Exosc10|50912|exosome component 10	AK166070|Exosc10|50912|exosome component 10	AK144162|Exosc10|50912|exosome component 10	BC027326|Exosc10|50912|exosome component 10
mm9_v1_chr17_+_35189798_35189804	0.0142147	CRX.p2	
mm9_v1_chr9_+_69843263_69843284	0.0140524	CRX.p2	AF400107|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AY591757|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AY591758|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	NM_001008238|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr15_-_97536251_97536289	0.0139006	CRX.p2	AK009765|Rpap3|71919|RNA polymerase II associated protein 3	NM_028003|Rpap3|71919|RNA polymerase II associated protein 3	BC004046|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr9_-_7872896_7873169	0.0138019	CRX.p2	AK172636|Birc3|11796|baculoviral IAP repeat-containing 3	BC011338|Birc3|11796|baculoviral IAP repeat-containing 3	U88908|Birc3|11796|baculoviral IAP repeat-containing 3	AK162108|Birc3|11796|baculoviral IAP repeat-containing 3	NM_007464|Birc3|11796|baculoviral IAP repeat-containing 3
mm9_v1_chr12_-_88784769_88784966	0.0138005	CRX.p2	BC050856|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC094381|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK012518|Nrp|654309|neural regeneration protein	AK143105|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK042102|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK049549|Nrp|654309|neural regeneration protein	AK144828|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	NM_001102565|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC119399|Nrp|654309|neural regeneration protein	BC119401|Nrp|654309|neural regeneration protein	AY753183|Nrp|654309|neural regeneration protein	NM_001013372|Nrp|654309|neural regeneration protein
mm9_v1_chr17_+_26852581_26852657	0.0137423	CRX.p2	AK030092|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	NM_029870|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK044760|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK020796|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132423|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132454|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr8_-_125842442_125842449	0.0133603	CRX.p2	AF208123|Fanca|14087|Fanconi anemia, complementation group A
mm9_v1_chr14_+_52898820_52898820	0.0132882	CRX.p2	NM_023434|Tox4|268741|TOX high mobility group box family member 4
mm9_v1_chr19_+_43856793_43856893	0.0132581	CRX.p2	NM_013806|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF227274|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282772|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282773|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2
mm9_v1_chr10_+_92951804_92951841	0.0131589	CRX.p2	AK028963|Hal|15109|histidine ammonia lyase	AK081409|Hal|15109|histidine ammonia lyase	BC057637|Hal|15109|histidine ammonia lyase	L07645|Hal|15109|histidine ammonia lyase
mm9_v1_chr3_+_121747377_121747377	0.0129957	CRX.p2	AF000149|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	BC057853|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	NM_007378|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4
mm9_v1_chr13_-_59924405_59924507	0.0129088	CRX.p2	BC043111|Zcchc6|214290|zinc finger, CCHC domain containing 6	AK031537|Zcchc6|214290|zinc finger, CCHC domain containing 6	NM_153538|Zcchc6|214290|zinc finger, CCHC domain containing 6
mm9_v1_chr1_+_175350728_175350734	0.0128359	CRX.p2	BC033443|Aim2|383619|absent in melanoma 2	AK050724|Aim2|383619|absent in melanoma 2	NM_001013779|Aim2|383619|absent in melanoma 2
mm9_v1_chr18_+_30432499_30432592	0.0122698	CRX.p2	AK030578|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC024675|Pik3c3|225326|phosphoinositide-3-kinase, class 3	NM_181414|Pik3c3|225326|phosphoinositide-3-kinase, class 3	AK044997|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC057678|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC027029|Pik3c3|225326|phosphoinositide-3-kinase, class 3
mm9_v1_chr1_+_66368571_66368671	0.0121046	CRX.p2	AK046341|Mtap2|17756|microtubule-associated protein 2	AK086484|Mtap2|17756|microtubule-associated protein 2	M21041|Mtap2|17756|microtubule-associated protein 2	AK141458|Mtap2|17756|microtubule-associated protein 2
mm9_v1_chr8_+_108232190_108232202	0.0120901	CRX.p2	AK016673|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene	BC125412|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene	BC138007|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene	BC145093|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene	NM_027655|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene
mm9_v1_chr7_+_28459677_28459679	0.0120594	CRX.p2	BC060708|C030039L03Rik|112415|RIKEN cDNA C030039L03 gene	NM_198417|C030039L03Rik|112415|RIKEN cDNA C030039L03 gene
mm9_v1_chr11_+_33947115_33947287	0.0117998	CRX.p2	AK036727|Lcp2|16822|lymphocyte cytosolic protein 2	AK037970|Lcp2|16822|lymphocyte cytosolic protein 2	U20159|Lcp2|16822|lymphocyte cytosolic protein 2	AK168134|Lcp2|16822|lymphocyte cytosolic protein 2	AK153374|Lcp2|16822|lymphocyte cytosolic protein 2	BC006948|Lcp2|16822|lymphocyte cytosolic protein 2	NM_010696|Lcp2|16822|lymphocyte cytosolic protein 2
mm9_v1_chr3_-_144347983_144348061	0.0117786	CRX.p2	
mm9_v1_chr10_+_76731607_76731785	0.0116972	CRX.p2	AK218752|Pofut2|80294|protein O-fucosyltransferase 2	AK206420|Pofut2|80294|protein O-fucosyltransferase 2
mm9_v1_chr5_-_37221812_37221913	0.0116046	CRX.p2	BC066211|Man2b2|17160|mannosidase 2, alpha B2	AK004900|Man2b2|17160|mannosidase 2, alpha B2	AK040388|Man2b2|17160|mannosidase 2, alpha B2	AK151873|Man2b2|17160|mannosidase 2, alpha B2	AK152349|Man2b2|17160|mannosidase 2, alpha B2	AB006458|Man2b2|17160|mannosidase 2, alpha B2	AK079969|Man2b2|17160|mannosidase 2, alpha B2	AK165376|Man2b2|17160|mannosidase 2, alpha B2	NM_008550|Man2b2|17160|mannosidase 2, alpha B2
mm9_v1_chr13_-_119175893_119176078	0.0115963	CRX.p2	AK013360|Mrps30|59054|mitochondrial ribosomal protein S30	BC029784|Mrps30|59054|mitochondrial ribosomal protein S30	AK011476|Mrps30|59054|mitochondrial ribosomal protein S30	AK151642|Mrps30|59054|mitochondrial ribosomal protein S30	NM_021556|Mrps30|59054|mitochondrial ribosomal protein S30
mm9_v1_chr4_+_120550473_120550605	0.0112884	CRX.p2	AY326953|Rims3|242662|regulating synaptic membrane exocytosis 3	BC115536|Rims3|242662|regulating synaptic membrane exocytosis 3	NM_182929|Rims3|242662|regulating synaptic membrane exocytosis 3	AK122226|Rims3|242662|regulating synaptic membrane exocytosis 3
mm9_v1_chr3_+_134944239_134944255	0.0112249	CRX.p2	BC036998|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr2_-_32137306_32137330	0.0111723	CRX.p2	AB597965|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK216650|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene
mm9_v1_chr1_-_181682859_181682906	0.0107914	CRX.p2	AK016646|Ahctf1|226747|AT hook containing transcription factor 1
mm9_v1_chr3_-_96097855_96097923	0.0106285	CRX.p2	BC025535|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143154|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143155|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143156|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143157|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143158|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143159|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143160|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143161|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143162|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143163|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143164|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143165|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143166|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143167|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143168|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143169|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143170|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143171|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143172|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143173|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143174|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143175|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143176|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143177|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143178|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143179|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143180|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143181|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143186|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143187|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143188|Fcgr1|14129|Fc receptor, IgG, high affinity I	X70980|Fcgr1|14129|Fc receptor, IgG, high affinity I	M31314|Fcgr1|14129|Fc receptor, IgG, high affinity I	AK033874|Fcgr1|14129|Fc receptor, IgG, high affinity I	NM_010186|Fcgr1|14129|Fc receptor, IgG, high affinity I
mm9_v1_chr1_-_55084269_55084299	0.0103679	CRX.p2	AK012632|Sf3b1|81898|splicing factor 3b, subunit 1	BC037098|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr1_-_170362388_170362504	0.0100949	CRX.p2	NM_008783|Pbx1|18514|pre B-cell leukemia transcription factor 1	NM_183355|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr4_+_41516826_41516894	0.0100635	CRX.p2	AK047808|Dnaic1|68922|dynein, axonemal, intermediate chain 1	NM_175138|Dnaic1|68922|dynein, axonemal, intermediate chain 1	BC138785|Dnaic1|68922|dynein, axonemal, intermediate chain 1	BC138787|Dnaic1|68922|dynein, axonemal, intermediate chain 1	AK030213|Dnaic1|68922|dynein, axonemal, intermediate chain 1
mm9_v1_chr7_-_52722144_52722269	0.01002	CRX.p2	AY095934|Bax|12028|BCL2-associated X protein	L22472|Bax|12028|BCL2-associated X protein	AK149994|Bax|12028|BCL2-associated X protein	AK013298|Bax|12028|BCL2-associated X protein	BC053380|Bax|12028|BCL2-associated X protein	BC018228|Bax|12028|BCL2-associated X protein	AK159233|Bax|12028|BCL2-associated X protein	NM_007527|Bax|12028|BCL2-associated X protein
mm9_v1_chr19_-_41289045_41289143	0.00999671	CRX.p2	AK004050|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr10_-_77460176_77460322	0.00997751	CRX.p2	AK030892|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr8_-_73421336_73421350	0.00925048	CRX.p2	NM_029751|Rpl18a|76808|ribosomal protein L18A
mm9_v1_chr11_+_52202137_52202376	0.00919813	CRX.p2	AK217498|Vdac1|22333|voltage-dependent anion channel 1	AK210208|Vdac1|22333|voltage-dependent anion channel 1	AK215454|Vdac1|22333|voltage-dependent anion channel 1	AK207573|Vdac1|22333|voltage-dependent anion channel 1
mm9_v1_chr8_+_127355597_127355611	0.00914805	CRX.p2	AK148282|Gm16163|100303730|predicted gene 16163
mm9_v1_chr17_-_24211852_24211965	0.00901562	CRX.p2	AK079579|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1
mm9_v1_chr19_+_8840883_8840977	0.00864091	CRX.p2	AK052937|Nxf1|53319|nuclear RNA export factor 1 homolog (S. cerevisiae)
mm9_v1_chr14_+_119379780_119379927	0.00840606	CRX.p2	
mm9_v1_chr17_-_35971652_35971809	0.00839878	CRX.p2	AK080778|Tubb5|22154|tubulin, beta 5	AK088137|Tubb5|22154|tubulin, beta 5
mm9_v1_chr14_+_55634290_55634413	0.00788294	CRX.p2	NM_026890|Ngdn|68966|neuroguidin, EIF4E binding protein	BC052790|Ngdn|68966|neuroguidin, EIF4E binding protein	EF437387|Ngdn|68966|neuroguidin, EIF4E binding protein	AK005098|Ngdn|68966|neuroguidin, EIF4E binding protein
mm9_v1_chr11_-_100276112_100276132	0.00785276	CRX.p2	BC031856|Leprel4|66180|leprecan-like 4	NM_176830|Leprel4|66180|leprecan-like 4
mm9_v1_chr12_+_72075637_72075733	0.00770348	CRX.p2	AK165424|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AK002877|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AF055983|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AK168495|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AK169577|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	BC091743|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AF060089|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3
mm9_v1_chr6_+_30758582_30758676	0.0075903	CRX.p2	AK014219|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr8_-_72433344_72433376	0.00753951	CRX.p2	AK004386|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr16_+_34921598_34921714	0.00745495	CRX.p2	AY237727|Mylk|107589|myosin, light polypeptide kinase	BC045197|Mylk|107589|myosin, light polypeptide kinase	AK078556|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr15_+_78860043_78860112	0.00733201	CRX.p2	AK195119|H1f0|14958|H1 histone family, member 0
mm9_v1_chr7_-_149069070_149069207	0.00728977	CRX.p2	AK049198|Tollip|54473|toll interacting protein
mm9_v1_chr17_-_37451325_37451381	0.00721383	CRX.p2	BC111097|Olfr100|404307|olfactory receptor 100	BC127233|Olfr100|404307|olfactory receptor 100	BC127234|Olfr100|404307|olfactory receptor 100	NM_207673|Olfr100|404307|olfactory receptor 100	BC139114|Olfr102|258218|olfactory receptor 102	BC139115|Olfr102|258218|olfactory receptor 102	NM_001011721|Olfr102|258218|olfactory receptor 102
mm9_v1_chr2_+_32583221_32583245	0.00675008	CRX.p2	AK042709|Sh2d3c|27387|SH2 domain containing 3C	AK085885|Sh2d3c|27387|SH2 domain containing 3C	AK135231|Sh2d3c|27387|SH2 domain containing 3C	AB030442|Sh2d3c|27387|SH2 domain containing 3C
mm9_v1_chr6_+_116214215_116214252	0.00662341	CRX.p2	AK089032|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)	NM_001081317|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)
mm9_v1_chr3_+_88500529_88500661	0.00660194	CRX.p2	AK193095|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene
mm9_v1_chr8_-_125842456_125842475	0.00650429	CRX.p2	AK082847|Fanca|14087|Fanconi anemia, complementation group A	AK084990|Fanca|14087|Fanconi anemia, complementation group A	AK166112|Fanca|14087|Fanconi anemia, complementation group A	AF208122|Fanca|14087|Fanconi anemia, complementation group A	AF178934|Fanca|14087|Fanconi anemia, complementation group A	BC150705|Fanca|14087|Fanconi anemia, complementation group A	AF208116|Fanca|14087|Fanconi anemia, complementation group A	AF208118|Fanca|14087|Fanconi anemia, complementation group A	NM_016925|Fanca|14087|Fanconi anemia, complementation group A
mm9_v1_chr11_+_101140325_101140516	0.00647864	CRX.p2	AK006754|Cntd1|68107|cyclin N-terminal domain containing 1	AK049116|Cntd1|68107|cyclin N-terminal domain containing 1	BC006866|Cntd1|68107|cyclin N-terminal domain containing 1	AK007245|Cntd1|68107|cyclin N-terminal domain containing 1	NM_026562|Cntd1|68107|cyclin N-terminal domain containing 1
mm9_v1_chr6_+_97160749_97160814	0.00625288	CRX.p2	AF421860|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK077826|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	NM_022992|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK076519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK088205|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF133912|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	BC003897|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK008519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK005259|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF265214|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chr1_-_121545158_121545240	0.00616524	CRX.p2	BC003937|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chr11_-_53097625_53097670	0.00607571	CRX.p2	AK179174|Hspa4|15525|heat shock protein 4
mm9_v1_chrX_+_71415963_71415984	0.00588944	CRX.p2	
mm9_v1_chr10_+_20059547_20059574	0.00570347	CRX.p2	AK169491|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr3_-_142456600_142456910	0.0056982	CRX.p2	AK140746|Pkn2|109333|protein kinase N2	AK084887|Pkn2|109333|protein kinase N2	AK082921|Pkn2|109333|protein kinase N2
mm9_v1_chr17_+_46298055_46298112	0.005646	CRX.p2	AK148020|Gtpbp2|56055|GTP binding protein 2	AK087511|Gtpbp2|56055|GTP binding protein 2	AF168991|Gtpbp2|56055|GTP binding protein 2	AK008731|Gtpbp2|56055|GTP binding protein 2
mm9_v1_chrX_-_143988623_143988623	0.00554029	CRX.p2	NM_001081173|Lrch2|210297|leucine-rich repeats and calponin homology (CH) domain containing 2
mm9_v1_chr9_+_45715013_45715102	0.00553501	CRX.p2	AK165389|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK151980|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK148416|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	BC007322|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	U48830|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7
mm9_v1_chr19_+_9022763_9022826	0.00540464	CRX.p2	AK003701|Mta2|23942|metastasis-associated gene family, member 2	AK186547|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr11_+_49273182_49273182	0.00522256	CRX.p2	NM_146473|Olfr1387|258465|olfactory receptor 1387
mm9_v1_chr14_-_45479028_45479049	0.00484746	CRX.p2	BC132297|Ptgdr|19214|prostaglandin D receptor	AK032488|Ptgdr|19214|prostaglandin D receptor	NM_008962|Ptgdr|19214|prostaglandin D receptor
mm9_v1_chr10_+_128787620_128787620	0.00473866	CRX.p2	NM_001011797|Olfr782|257985|olfactory receptor 782
mm9_v1_chr8_-_46020512_46020524	0.0044811	CRX.p2	AK079043|Gm9908|100045396|predicted gene 9908
mm9_v1_chr11_+_116395281_116395465	0.00435918	CRX.p2	AK136289|Sphk1|20698|sphingosine kinase 1	AK197304|Sphk1|20698|sphingosine kinase 1
mm9_v1_chr15_+_3220766_3220979	0.00422694	CRX.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr11_-_70043222_70043264	0.00416489	CRX.p2	AB011665|Bcl6b|12029|B-cell CLL/lymphoma 6, member B	BC090998|Bcl6b|12029|B-cell CLL/lymphoma 6, member B	AK156733|Bcl6b|12029|B-cell CLL/lymphoma 6, member B
mm9_v1_chr19_-_32177613_32177629	0.00386815	CRX.p2	BC137898|Asah2|54447|N-acylsphingosine amidohydrolase 2	BC145016|Asah2|54447|N-acylsphingosine amidohydrolase 2	AB037181|Asah2|54447|N-acylsphingosine amidohydrolase 2	NM_018830|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr15_-_97536204_97536244	0.00383424	CRX.p2	AK169097|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr5_+_104864168_104864178	0.00339166	CRX.p2	AK151069|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr11_-_73137838_73138062	0.00338769	CRX.p2	AK035910|Aspa|11484|aspartoacylase	AF212998|Aspa|11484|aspartoacylase
mm9_v1_chr11_-_90252208_90252214	0.00314831	CRX.p2	BC058705|Hlf|217082|hepatic leukemia factor
mm9_v1_chr11_-_96902657_96902728	0.0031145	CRX.p2	AK005668|Lrrc46|69297|leucine rich repeat containing 46	BC022723|Lrrc46|69297|leucine rich repeat containing 46	NM_027026|Lrrc46|69297|leucine rich repeat containing 46	AK158517|Lrrc46|69297|leucine rich repeat containing 46
mm9_v1_chr5_+_76613120_76613173	0.00309263	CRX.p2	BC141081|Tmem165|21982|transmembrane protein 165
mm9_v1_chr2_-_25079684_25079784	0.00295677	CRX.p2	AK006924|Tubb2c|227613|tubulin, beta 2C
mm9_v1_chr4_-_141161882_141162024	0.00269726	CRX.p2	AK170440|Fblim1|74202|filamin binding LIM protein 1	AK154680|Fblim1|74202|filamin binding LIM protein 1	AK163587|Fblim1|74202|filamin binding LIM protein 1	AK170151|Fblim1|74202|filamin binding LIM protein 1	NM_133754|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr2_+_74695081_74695176	0.00245423	CRX.p2	
mm9_v1_chr7_-_112959591_112959616	0.00211044	CRX.p2	NM_025301|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr4_+_135354137_135354188	0.00206808	CRX.p2	AK033394|Myom3|242702|myomesin family, member 3
mm9_v1_chr17_-_46693110_46693149	0.00192507	CRX.p2	NM_020493|Srf|20807|serum response factor	BC051950|Srf|20807|serum response factor
mm9_v1_chr7_+_117161839_117161861	0.00174162	CRX.p2	AK187705|Ipo7|233726|importin 7
mm9_v1_chr4_+_84530230_84530239	0.00170055	CRX.p2	NM_175275|Cntln|338349|centlein, centrosomal protein	NM_177385|Cntln|338349|centlein, centrosomal protein
mm9_v1_chr1_+_34356614_34356645	0.00145363	CRX.p2	BC048929|Dst|13518|dystonin
mm9_v1_chr7_-_52317021_52317119	0.00139939	CRX.p2	BC025098|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2	NM_022999|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm9_v1_chr7_-_139758954_139758967	0.0013185	CRX.p2	AK187824|Oat|18242|ornithine aminotransferase
mm9_v1_chr5_-_128938328_128938476	0.00123466	CRX.p2	AB100355|Tmem132d|243274|transmembrane protein 132D	BC140953|Tmem132d|243274|transmembrane protein 132D
mm9_v1_chr2_-_60590923_60591029	0.00119422	CRX.p2	AK201259|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr2_+_69877182_69877182	0.00110401	CRX.p2	NM_177376|Myo3b|329421|myosin IIIB
mm9_v1_chr6_+_95067873_95067899	0.000945937	CRX.p2	AK142080|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8	NM_001008785|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8	NM_001102670|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8
mm9_v1_chr17_-_87657365_87657420	0.000915199	CRX.p2	GQ896355|Mcfd2|193813|multiple coagulation factor deficiency 2	GQ896356|Mcfd2|193813|multiple coagulation factor deficiency 2	AK206943|Mcfd2|193813|multiple coagulation factor deficiency 2
mm9_v1_chr19_-_24758826_24758856	0.00066244	CRX.p2	AK020587|Pgm5|226041|phosphoglucomutase 5
mm9_v1_chrX_-_75041092_75041310	0.000522682	CRX.p2	AK152166|Prkx|19108|protein kinase, X-linked	AJ238004|Prkx|19108|protein kinase, X-linked	AK169322|Prkx|19108|protein kinase, X-linked	AK150588|Prkx|19108|protein kinase, X-linked	AK036432|Prkx|19108|protein kinase, X-linked	AK149937|Prkx|19108|protein kinase, X-linked	AK081548|Prkx|19108|protein kinase, X-linked	AK154447|Prkx|19108|protein kinase, X-linked	AK037141|Prkx|19108|protein kinase, X-linked	BC006875|Prkx|19108|protein kinase, X-linked	NM_016979|Prkx|19108|protein kinase, X-linked	AK139510|Prkx|19108|protein kinase, X-linked	AK039088|Prkx|19108|protein kinase, X-linked
mm9_v1_chr10_+_127496140_127496244	0.000380796	CRX.p2	BC085264|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	BC003708|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	AK075932|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	AK168721|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	AK017742|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)	AB024935|Ptges3|56351|prostaglandin E synthase 3 (cytosolic)
mm9_v1_chr12_+_72075602_72075612	0.000364485	CRX.p2	NM_011184|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3
mm9_v1_chrM_+_9458_9465	0.00031021	CRX.p2	AK139029|ND3|17718|NADH dehydrogenase subunit 3
mm9_v1_chr4_+_155484072_155484109	0.000203639	CRX.p2	AK029276|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	BC004010|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_145557|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_177205|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	AK034620|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene
mm9_v1_chr10_-_18735154_18735215	0.000174634	CRX.p2	AK153238|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK088297|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK151921|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC050259|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC054806|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC060221|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	NM_009397|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3
mm9_v1_chr2_+_28915770_28915796	0.000149114	CRX.p2	AK053589|Ttf1|22130|transcription termination factor, RNA polymerase I	AK163606|Ttf1|22130|transcription termination factor, RNA polymerase I	NM_009442|Ttf1|22130|transcription termination factor, RNA polymerase I	AK140081|Ttf1|22130|transcription termination factor, RNA polymerase I	X83974|Ttf1|22130|transcription termination factor, RNA polymerase I
mm9_v1_chr17_+_17539635_17539669	8.63348e-05	CRX.p2	BC049574|Lix1|66643|limb expression 1 homolog (chicken)	NM_025681|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr2_+_144353453_144353461	2.05441e-05	CRX.p2	AK076538|Polr3f|70408|polymerase (RNA) III (DNA directed) polypeptide F
