mm9_v1_chr2_+_25036276_25036300	9.26426	HIF1A.p2	AY046077|Nrarp|67122|Notch-regulated ankyrin repeat protein	NM_025980|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC020293|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC048088|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr5_+_129526060_129526131	6.03435	HIF1A.p2	BC014829|Ran|19384|RAN, member RAS oncogene family	AK153197|Ran|19384|RAN, member RAS oncogene family	AK075900|Ran|19384|RAN, member RAS oncogene family	AK145272|Ran|19384|RAN, member RAS oncogene family	AK160647|Ran|19384|RAN, member RAS oncogene family	AK168183|Ran|19384|RAN, member RAS oncogene family	AK151341|Ran|19384|RAN, member RAS oncogene family	AK151937|Ran|19384|RAN, member RAS oncogene family	AK153411|Ran|19384|RAN, member RAS oncogene family	AK087974|Ran|19384|RAN, member RAS oncogene family	AK167040|Ran|19384|RAN, member RAS oncogene family	AK010672|Ran|19384|RAN, member RAS oncogene family	BC083356|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr5_+_129526383_129526424	5.82873	HIF1A.p2	L32751|Ran|19384|RAN, member RAS oncogene family	AF159256|Ran|19384|RAN, member RAS oncogene family	M79316|Ran|19384|RAN, member RAS oncogene family	AK217413|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr14_+_31832374_31832396	5.59118	HIF1A.p2	AK030781|Pbrm1|66923|polybromo 1
mm9_v1_chr13_-_81772121_81772142	5.41672	HIF1A.p2	BC080679|Gpr98|110789|G protein-coupled receptor 98	AB086166|Gpr98|110789|G protein-coupled receptor 98	AB086167|Gpr98|110789|G protein-coupled receptor 98	AK053565|Gpr98|110789|G protein-coupled receptor 98	AF435926|Gpr98|110789|G protein-coupled receptor 98	NM_054053|Gpr98|110789|G protein-coupled receptor 98
mm9_v1_chr5_+_129526311_129526363	5.32582	HIF1A.p2	AK012268|Ran|19384|RAN, member RAS oncogene family	AK010569|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr1_-_55144637_55144685	4.96245	HIF1A.p2	X55023|Hspd1|15510|heat shock protein 1 (chaperonin)	BC016400|Hspd1|15510|heat shock protein 1 (chaperonin)	AK143882|Hspd1|15510|heat shock protein 1 (chaperonin)
mm9_v1_chr10_+_43198945_43198945	4.78633	HIF1A.p2	BC060240|Bend3|331623|BEN domain containing 3	NM_199028|Bend3|331623|BEN domain containing 3
mm9_v1_chr1_-_153937097_153937320	4.73883	HIF1A.p2	AK167392|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene	BC034723|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene	BC055912|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene
mm9_v1_chr17_+_35137995_35138088	4.65304	HIF1A.p2	AK157814|Vars|22321|valyl-tRNA synthetase	AK012123|Vars|22321|valyl-tRNA synthetase	AK154823|Vars|22321|valyl-tRNA synthetase	BC053703|Vars|22321|valyl-tRNA synthetase	AF087680|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr12_-_28027541_28027588	4.62413	HIF1A.p2	AK146514|Sox11|20666|SRY-box containing gene 11	AF009414|Sox11|20666|SRY-box containing gene 11	BC078643|Sox11|20666|SRY-box containing gene 11	AK165693|Sox11|20666|SRY-box containing gene 11	AK165005|Sox11|20666|SRY-box containing gene 11	NM_009234|Sox11|20666|SRY-box containing gene 11
mm9_v1_chr3_-_107889507_107889627	4.44341	HIF1A.p2	BC049119|Ampd2|109674|adenosine monophosphate deaminase 2	NM_028779|Ampd2|109674|adenosine monophosphate deaminase 2	AK169980|Ampd2|109674|adenosine monophosphate deaminase 2	AK004759|Ampd2|109674|adenosine monophosphate deaminase 2
mm9_v1_chr16_+_52031733_52031765	4.36385	HIF1A.p2	AK045005|Cblb|208650|Casitas B-lineage lymphoma b
mm9_v1_chr14_+_70008874_70008979	4.30046	HIF1A.p2	BC086801|Loxl2|94352|lysyl oxidase-like 2	AK145323|Loxl2|94352|lysyl oxidase-like 2	AK034957|Loxl2|94352|lysyl oxidase-like 2	AK159386|Loxl2|94352|lysyl oxidase-like 2
mm9_v1_chr13_-_72101161_72101175	4.29071	HIF1A.p2	AK133937|Irx1|16371|Iroquois related homeobox 1 (Drosophila)	NM_010573|Irx1|16371|Iroquois related homeobox 1 (Drosophila)
mm9_v1_chr16_+_70314306_70314318	4.27946	HIF1A.p2	AK050365|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	AK050423|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1
mm9_v1_chr11_-_102680467_102680523	4.23796	HIF1A.p2	BC050840|Gjc1|14615|gap junction protein, gamma 1	NM_001159382|Gjc1|14615|gap junction protein, gamma 1	BC023153|Gjc1|14615|gap junction protein, gamma 1	AY390397|Gjc1|14615|gap junction protein, gamma 1
mm9_v1_chr11_+_120810346_120810440	4.0294	HIF1A.p2	AK149707|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK149983|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	NM_001038653|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	NM_001038654|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK141381|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK166048|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK171260|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK169917|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK165596|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3
mm9_v1_chr16_+_52031704_52031719	4.00313	HIF1A.p2	BC150934|Cblb|208650|Casitas B-lineage lymphoma b	BC150938|Cblb|208650|Casitas B-lineage lymphoma b	AK156295|Cblb|208650|Casitas B-lineage lymphoma b	AK171350|Cblb|208650|Casitas B-lineage lymphoma b
mm9_v1_chr9_-_8004559_8004652	3.94308	HIF1A.p2	BC094313|Yap1|22601|yes-associated protein 1	BC014733|Yap1|22601|yes-associated protein 1	X80508|Yap1|22601|yes-associated protein 1	AK157234|Yap1|22601|yes-associated protein 1	NM_001171147|Yap1|22601|yes-associated protein 1	NM_009534|Yap1|22601|yes-associated protein 1
mm9_v1_chr2_-_179777080_179777173	3.9132	HIF1A.p2	BC014752|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	BC008222|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AF019662|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	NM_011969|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK088615|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK165563|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK146765|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK168234|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7
mm9_v1_chr4_-_137352181_137352292	3.86188	HIF1A.p2	X13409|Alpl|11647|alkaline phosphatase, liver/bone/kidney	BC065175|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK167481|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK166732|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK076459|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK161780|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK167023|Alpl|11647|alkaline phosphatase, liver/bone/kidney	J02980|Alpl|11647|alkaline phosphatase, liver/bone/kidney	NM_007431|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK164002|Alpl|11647|alkaline phosphatase, liver/bone/kidney
mm9_v1_chr7_-_147234897_147234986	3.74508	HIF1A.p2	AB221640|Msx3|17703|homeobox, msh-like 3	BC051983|Msx3|17703|homeobox, msh-like 3	BC137577|Msx3|17703|homeobox, msh-like 3	BC137578|Msx3|17703|homeobox, msh-like 3	U62523|Msx3|17703|homeobox, msh-like 3	AK012208|Msx3|17703|homeobox, msh-like 3	AK012556|Msx3|17703|homeobox, msh-like 3	NM_010836|Msx3|17703|homeobox, msh-like 3
mm9_v1_chr1_+_174412343_174412487	3.67208	HIF1A.p2	NM_001145800|Igsf9|93842|immunoglobulin superfamily, member 9	AK053544|Igsf9|93842|immunoglobulin superfamily, member 9	AK078536|Igsf9|93842|immunoglobulin superfamily, member 9	BC034594|Igsf9|93842|immunoglobulin superfamily, member 9	AK145121|Igsf9|93842|immunoglobulin superfamily, member 9	AF317839|Igsf9|93842|immunoglobulin superfamily, member 9	NM_033608|Igsf9|93842|immunoglobulin superfamily, member 9	BC040281|Igsf9|93842|immunoglobulin superfamily, member 9
mm9_v1_chr11_+_3190334_3190510	3.53875	HIF1A.p2	AK166189|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	BC043035|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	AB029397|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	NM_019574|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr12_+_33505175_33505279	3.4579	HIF1A.p2	BC018358|Nampt|59027|nicotinamide phosphoribosyltransferase	NM_021524|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr3_+_87774988_87775050	3.41436	HIF1A.p2	AK031207|Nes|18008|nestin	AK012622|Nes|18008|nestin	BC062893|Nes|18008|nestin	NM_016701|Nes|18008|nestin	BC060693|Nes|18008|nestin	AF076623|Nes|18008|nestin
mm9_v1_chr1_-_55144687_55144775	3.37466	HIF1A.p2	AK088844|Hspd1|15510|heat shock protein 1 (chaperonin)	AK146831|Hspd1|15510|heat shock protein 1 (chaperonin)	NM_010477|Hspd1|15510|heat shock protein 1 (chaperonin)
mm9_v1_chr16_-_18248701_18248813	3.3493	HIF1A.p2	AK008276|Ranbp1|19385|RAN binding protein 1	AK002989|Ranbp1|19385|RAN binding protein 1	AK151167|Ranbp1|19385|RAN binding protein 1	AK153074|Ranbp1|19385|RAN binding protein 1	AK167053|Ranbp1|19385|RAN binding protein 1	AK088781|Ranbp1|19385|RAN binding protein 1	AK166642|Ranbp1|19385|RAN binding protein 1	NM_011239|Ranbp1|19385|RAN binding protein 1	X56045|Ranbp1|19385|RAN binding protein 1	X56046|Ranbp1|19385|RAN binding protein 1	BC061140|Ranbp1|19385|RAN binding protein 1
mm9_v1_chr1_+_55144949_55145013	3.31308	HIF1A.p2	NM_008303|Hspe1|15528|heat shock protein 1 (chaperonin 10)
mm9_v1_chr3_+_135101248_135101271	3.23903	HIF1A.p2	AK167138|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK003163|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK009276|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK009936|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr3_+_87775081_87775219	3.23595	HIF1A.p2	AK009706|Nes|18008|nestin	S78708|Nes|18008|nestin
mm9_v1_chr11_+_118884275_118884425	3.18769	HIF1A.p2	X62537|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	BC035199|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	NM_007623|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	AK157869|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	Y13274|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)
mm9_v1_chr9_-_63605917_63606020	3.16426	HIF1A.p2	BC022904|Smad3|17127|MAD homolog 3 (Drosophila)
mm9_v1_chr19_+_18787654_18787754	3.10985	HIF1A.p2	AK145019|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	AK155389|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	AK083631|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	NM_177640|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	BC020125|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene
mm9_v1_chr7_+_54101157_54101223	3.09851	HIF1A.p2	NM_010699|Ldha|16828|lactate dehydrogenase A	AK168920|Ldha|16828|lactate dehydrogenase A	AK089929|Ldha|16828|lactate dehydrogenase A	AK146121|Ldha|16828|lactate dehydrogenase A	AK150156|Ldha|16828|lactate dehydrogenase A	AK167789|Ldha|16828|lactate dehydrogenase A	AK167944|Ldha|16828|lactate dehydrogenase A	AK168346|Ldha|16828|lactate dehydrogenase A	AK170386|Ldha|16828|lactate dehydrogenase A	AK171373|Ldha|16828|lactate dehydrogenase A	AK170708|Ldha|16828|lactate dehydrogenase A	AK149919|Ldha|16828|lactate dehydrogenase A	BC094428|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr9_+_107471447_107471514	3.09636	HIF1A.p2	AK133886|Hyal2|15587|hyaluronoglucosaminidase 2	AK088806|Hyal2|15587|hyaluronoglucosaminidase 2	AJ000059|Hyal2|15587|hyaluronoglucosaminidase 2	AK087358|Hyal2|15587|hyaluronoglucosaminidase 2	AF302843|Hyal2|15587|hyaluronoglucosaminidase 2	AF422177|Hyal2|15587|hyaluronoglucosaminidase 2	NM_010489|Hyal2|15587|hyaluronoglucosaminidase 2	AF302844|Hyal2|15587|hyaluronoglucosaminidase 2
mm9_v1_chr1_-_153937364_153937449	3.05349	HIF1A.p2	AK144357|LOC545371|545371|hypothetical protein LOC545371	NM_197990|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene
mm9_v1_chr1_-_75176965_75176984	3.02407	HIF1A.p2	AK151165|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr2_-_73052484_73052503	2.98317	HIF1A.p2	AK013055|Ola1|67059|Obg-like ATPase 1	NM_025942|Ola1|67059|Obg-like ATPase 1	NM_030091|Ola1|67059|Obg-like ATPase 1
mm9_v1_chr8_+_49195311_49195555	2.94329	HIF1A.p2	NM_178788|Dctd|320685|dCMP deaminase	AK031645|Dctd|320685|dCMP deaminase	AK077663|Dctd|320685|dCMP deaminase	NM_001161515|Dctd|320685|dCMP deaminase	AK171894|Dctd|320685|dCMP deaminase	BC031719|Dctd|320685|dCMP deaminase	AK039066|Dctd|320685|dCMP deaminase
mm9_v1_chr16_-_22163264_22163371	2.93433	HIF1A.p2	NM_183029|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2
mm9_v1_chr2_+_162880370_162880424	2.93301	HIF1A.p2	AK028497|Mybl2|17865|myeloblastosis oncogene-like 2	NM_008652|Mybl2|17865|myeloblastosis oncogene-like 2	X70472|Mybl2|17865|myeloblastosis oncogene-like 2	BC050842|Mybl2|17865|myeloblastosis oncogene-like 2
mm9_v1_chr4_+_46463793_46463908	2.876	HIF1A.p2	AK011134|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
mm9_v1_chr5_+_129525943_129526053	2.86366	HIF1A.p2	AK002436|Ran|19384|RAN, member RAS oncogene family	NM_009391|Ran|19384|RAN, member RAS oncogene family	S83456|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr18_-_34166572_34166697	2.86229	HIF1A.p2	BC007166|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	BC013557|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	AK161182|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a
mm9_v1_chr10_+_68675404_68675423	2.83316	HIF1A.p2	AK034826|Rhobtb1|69288|Rho-related BTB domain containing 1	NM_001081347|Rhobtb1|69288|Rho-related BTB domain containing 1	BC099973|Rhobtb1|69288|Rho-related BTB domain containing 1
mm9_v1_chr7_-_126138646_126138673	2.81247	HIF1A.p2	AF378831|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B	BC020004|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B
mm9_v1_chr5_-_92566671_92566678	2.7935	HIF1A.p2	
mm9_v1_chr5_+_125343060_125343124	2.77095	HIF1A.p2	AK143192|Zfp664|269704|zinc finger protein 664	AK086580|Zfp664|269704|zinc finger protein 664	AK039671|Zfp664|269704|zinc finger protein 664	NM_001081750|Zfp664|269704|zinc finger protein 664	AK165974|Zfp664|269704|zinc finger protein 664
mm9_v1_chr17_-_31992708_31992780	2.76875	HIF1A.p2	U11494|Sik1|17691|salt inducible kinase 1	AK141817|Sik1|17691|salt inducible kinase 1	NM_010831|Sik1|17691|salt inducible kinase 1	AK172427|Sik1|17691|salt inducible kinase 1
mm9_v1_chr1_+_155587480_155587527	2.76132	HIF1A.p2	AK079543|Rgs16|19734|regulator of G-protein signaling 16	NM_011267|Rgs16|19734|regulator of G-protein signaling 16	AK154324|Rgs16|19734|regulator of G-protein signaling 16	U94828|Rgs16|19734|regulator of G-protein signaling 16	U67189|Rgs16|19734|regulator of G-protein signaling 16	BC049968|Rgs16|19734|regulator of G-protein signaling 16	BC010980|Rgs16|19734|regulator of G-protein signaling 16	BC055459|Rgs16|19734|regulator of G-protein signaling 16	U72881|Rgs16|19734|regulator of G-protein signaling 16
mm9_v1_chr2_+_172847371_172847458	2.71461	HIF1A.p2	AK166609|Rbm38|56190|RNA binding motif protein 38	NM_019547|Rbm38|56190|RNA binding motif protein 38	BC006687|Rbm38|56190|RNA binding motif protein 38	AK162141|Rbm38|56190|RNA binding motif protein 38	AK146026|Rbm38|56190|RNA binding motif protein 38	AK172625|Rbm38|56190|RNA binding motif protein 38	BC085307|Rbm38|56190|RNA binding motif protein 38
mm9_v1_chr7_+_137789668_137789799	2.69449	HIF1A.p2	AK145721|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	AK050985|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	AK137273|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr1_-_75176926_75176956	2.67366	HIF1A.p2	AK004605|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK150853|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK152584|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK168642|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr5_+_137791332_137791347	2.64143	HIF1A.p2	AK049340|Ephb4|13846|Eph receptor B4	AK132392|Ephb4|13846|Eph receptor B4	NM_001159571|Ephb4|13846|Eph receptor B4	NM_010144|Ephb4|13846|Eph receptor B4
mm9_v1_chr15_-_10644312_10644406	2.6412	HIF1A.p2	AK045733|Rai14|75646|retinoic acid induced 14	AK129333|Rai14|75646|retinoic acid induced 14	AK090343|Rai14|75646|retinoic acid induced 14	NM_001166408|Rai14|75646|retinoic acid induced 14
mm9_v1_chr2_+_31742800_31742863	2.62876	HIF1A.p2	BC096366|Lamc3|23928|laminin gamma 3	NM_011836|Lamc3|23928|laminin gamma 3	AF079520|Lamc3|23928|laminin gamma 3	AF083372|Lamc3|23928|laminin gamma 3
mm9_v1_chr7_-_26035683_26035785	2.62429	HIF1A.p2	BC063092|Erf|13875|Ets2 repressor factor	BC053045|Erf|13875|Ets2 repressor factor	BC059176|Erf|13875|Ets2 repressor factor	AK159225|Erf|13875|Ets2 repressor factor	NM_010155|Erf|13875|Ets2 repressor factor
mm9_v1_chr11_-_72225084_72225217	2.60202	HIF1A.p2	AK085988|Smtnl2|276829|smoothelin-like 2	BC037993|Smtnl2|276829|smoothelin-like 2	AK051585|Smtnl2|276829|smoothelin-like 2	NM_177776|Smtnl2|276829|smoothelin-like 2
mm9_v1_chr1_-_163181251_163181302	2.58593	HIF1A.p2	BC013489|Prdx6|11758|peroxiredoxin 6	AK172888|Prdx6|11758|peroxiredoxin 6	AF004670|Prdx6|11758|peroxiredoxin 6	AK168223|Prdx6|11758|peroxiredoxin 6	AK076191|Prdx6|11758|peroxiredoxin 6	AK035097|Prdx6|11758|peroxiredoxin 6	AK081980|Prdx6|11758|peroxiredoxin 6	AF093852|Prdx6|11758|peroxiredoxin 6	AK030413|Prdx6|11758|peroxiredoxin 6	AK161710|Prdx6|11758|peroxiredoxin 6	BC061181|Prdx6|11758|peroxiredoxin 6	NM_007453|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr8_-_72498125_72498184	2.56628	HIF1A.p2	BC038221|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr18_-_77803843_77803942	2.5535	HIF1A.p2	DQ465971|8030462N17Rik|212163|RIKEN cDNA 8030462N17 gene	NM_001164504|Rnf165|225743|ring finger protein 165
mm9_v1_chr4_-_131901576_131901664	2.55292	HIF1A.p2	BC019807|Rcc1|100088|regulator of chromosome condensation 1	AK155225|Rcc1|100088|regulator of chromosome condensation 1	AK150610|Rcc1|100088|regulator of chromosome condensation 1	AK153193|Rcc1|100088|regulator of chromosome condensation 1	AK153994|Rcc1|100088|regulator of chromosome condensation 1	AK150153|Rcc1|100088|regulator of chromosome condensation 1	BC057645|Rcc1|100088|regulator of chromosome condensation 1	AK076089|Rcc1|100088|regulator of chromosome condensation 1	NM_001197082|Rcc1|100088|regulator of chromosome condensation 1	NM_133878|Rcc1|100088|regulator of chromosome condensation 1
mm9_v1_chr17_+_46633703_46633755	2.5521	HIF1A.p2	BC082791|BC048355|381101|cDNA sequence BC048355	AK146723|BC048355|381101|cDNA sequence BC048355	NM_207161|BC048355|381101|cDNA sequence BC048355	BC048355|BC048355|381101|cDNA sequence BC048355	AK151589|BC048355|381101|cDNA sequence BC048355
mm9_v1_chr1_+_174078145_174078245	2.47074	HIF1A.p2	NM_153555|Dcaf8|98193|DDB1 and CUL4 associated factor 8	BC023704|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK146825|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK164799|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK047316|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chr8_+_11556495_11556521	2.45101	HIF1A.p2	BC016573|Ing1|26356|inhibitor of growth family, member 1
mm9_v1_chr8_-_64238879_64238894	2.44535	HIF1A.p2	AK031696|Palld|72333|palladin, cytoskeletal associated protein	AK162050|Palld|72333|palladin, cytoskeletal associated protein	AK087270|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr9_-_95745663_95745697	2.41565	HIF1A.p2	AK133070|Pls1|102502|plastin 1 (I-isoform)	NM_001033210|Pls1|102502|plastin 1 (I-isoform)
mm9_v1_chr7_-_31758185_31758231	2.40774	HIF1A.p2	AK146807|Lsr|54135|lipolysis stimulated lipoprotein receptor	BC004672|Lsr|54135|lipolysis stimulated lipoprotein receptor
mm9_v1_chr5_+_28492235_28492251	2.40392	HIF1A.p2	AK157766|En2|13799|engrailed 2	NM_010134|En2|13799|engrailed 2
mm9_v1_chr14_+_31832323_31832337	2.39882	HIF1A.p2	AK165182|Pbrm1|66923|polybromo 1	NM_001081251|Pbrm1|66923|polybromo 1
mm9_v1_chr19_-_38199291_38199302	2.39397	HIF1A.p2	AK004839|Rbp4|19662|retinol binding protein 4, plasma	AK008765|Rbp4|19662|retinol binding protein 4, plasma	NM_011255|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr12_+_52449216_52449372	2.3639	HIF1A.p2	NM_001015099|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	NM_001167963|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	NM_001167964|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK033513|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK129332|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	BC086455|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK084256|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK031333|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase
mm9_v1_chrX_-_91077426_91077556	2.35105	HIF1A.p2	AK075879|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	BC008126|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	NM_145630|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	AK132024|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	AK075985|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	AK088478|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	AK169874|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3
mm9_v1_chr7_-_35597470_35597729	2.34578	HIF1A.p2	AK005217|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AF308145|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	BC051124|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AK038952|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AK051290|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	NM_175140|Chst8|68947|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
mm9_v1_chr9_+_123387818_123387943	2.33395	HIF1A.p2	NM_013860|Limd1|29806|LIM domains containing 1	AJ132409|Limd1|29806|LIM domains containing 1	AK047198|Limd1|29806|LIM domains containing 1	BC023371|Limd1|29806|LIM domains containing 1	AK083970|Limd1|29806|LIM domains containing 1	BC056449|Limd1|29806|LIM domains containing 1
mm9_v1_chr7_-_126138689_126138754	2.32643	HIF1A.p2	NM_001195774|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B	NM_022420|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B
mm9_v1_chr12_+_33505307_33505342	2.32623	HIF1A.p2	AF234625|Nampt|59027|nicotinamide phosphoribosyltransferase	AK166270|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr6_-_88848650_88848773	2.30122	HIF1A.p2	AF004105|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK129039|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK077801|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK088378|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	BC055318|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK145176|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK088156|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK146187|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	D86725|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK146375|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK037751|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	NM_008564|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)
mm9_v1_chr9_+_64988960_64989018	2.28684	HIF1A.p2	AK011916|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	AF026465|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	AK051027|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	NM_008988|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	BC086481|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	BC053057|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3
mm9_v1_chr7_+_13609462_13609530	2.27323	HIF1A.p2	BC089337|Trim28|21849|tripartite motif-containing 28	NM_011588|Trim28|21849|tripartite motif-containing 28	U67303|Trim28|21849|tripartite motif-containing 28
mm9_v1_chr17_+_68046597_68046626	2.27308	HIF1A.p2	X07737|Lama1|16772|laminin, alpha 1	AK051116|Lama1|16772|laminin, alpha 1	NM_008480|Lama1|16772|laminin, alpha 1	J04064|Lama1|16772|laminin, alpha 1
mm9_v1_chr10_+_79689342_79689484	2.27002	HIF1A.p2	AK158750|Mum1|68114|melanoma associated antigen (mutated) 1	NM_023431|Mum1|68114|melanoma associated antigen (mutated) 1	AK159972|Mum1|68114|melanoma associated antigen (mutated) 1	AK170459|Mum1|68114|melanoma associated antigen (mutated) 1	AK154610|Mum1|68114|melanoma associated antigen (mutated) 1
mm9_v1_chr13_+_81796756_81796839	2.26062	HIF1A.p2	BC003322|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3	NM_030257|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3	AK029514|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3
mm9_v1_chr2_+_167363696_167363726	2.25076	HIF1A.p2	AK144478|Snai1|20613|snail homolog 1 (Drosophila)	BC034857|Snai1|20613|snail homolog 1 (Drosophila)	NM_011427|Snai1|20613|snail homolog 1 (Drosophila)
mm9_v1_chr17_+_74738195_74738352	2.23614	HIF1A.p2	BC046286|Spast|50850|spastin	NM_001162870|Spast|50850|spastin	NM_016962|Spast|50850|spastin	AK129282|Spast|50850|spastin
mm9_v1_chr5_-_124875507_124875632	2.20684	HIF1A.p2	BC021875|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	BC138418|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	BC106156|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK164542|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)
mm9_v1_chr19_+_41557475_41557518	2.20504	HIF1A.p2	AK041621|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr9_-_59598416_59598455	2.19421	HIF1A.p2	BC037443|Senp8|71599|SUMO/sentrin specific peptidase 8	AK018606|Senp8|71599|SUMO/sentrin specific peptidase 8	AK029856|Senp8|71599|SUMO/sentrin specific peptidase 8	AK049120|Senp8|71599|SUMO/sentrin specific peptidase 8	AK136214|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172068|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172069|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172070|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172071|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_027838|Senp8|71599|SUMO/sentrin specific peptidase 8
mm9_v1_chrX_+_103382432_103382595	2.1933	HIF1A.p2	NM_008828|Pgk1|18655|phosphoglycerate kinase 1	AK145846|Pgk1|18655|phosphoglycerate kinase 1	AK133877|Pgk1|18655|phosphoglycerate kinase 1	AK164440|Pgk1|18655|phosphoglycerate kinase 1	BC108372|Pgk1|18655|phosphoglycerate kinase 1	BC023819|Pgk1|18655|phosphoglycerate kinase 1	BC032167|Pgk1|18655|phosphoglycerate kinase 1	AK167441|Pgk1|18655|phosphoglycerate kinase 1	AK167459|Pgk1|18655|phosphoglycerate kinase 1	AK167710|Pgk1|18655|phosphoglycerate kinase 1	BC083355|Pgk1|18655|phosphoglycerate kinase 1	M15668|Pgk1|18655|phosphoglycerate kinase 1	EF437325|Pgk1|18655|phosphoglycerate kinase 1
mm9_v1_chr6_-_6167113_6167172	2.1815	HIF1A.p2	AK151180|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK152237|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AF164632|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK150496|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	NM_001177572|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	NM_015829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr9_+_50665024_50665086	2.17521	HIF1A.p2	NM_001034085|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	NM_028614|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	BC056218|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	AK136106|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	AK077158|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	AK161392|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform
mm9_v1_chr14_-_65881225_65881304	2.17489	HIF1A.p2	BC066186|Fzd3|14365|frizzled homolog 3 (Drosophila)	BC103714|Fzd3|14365|frizzled homolog 3 (Drosophila)	AK134261|Fzd3|14365|frizzled homolog 3 (Drosophila)	AK160554|Fzd3|14365|frizzled homolog 3 (Drosophila)	BC050965|Fzd3|14365|frizzled homolog 3 (Drosophila)	NM_021458|Fzd3|14365|frizzled homolog 3 (Drosophila)
mm9_v1_chr9_+_61220162_61220251	2.1742	HIF1A.p2	NM_001083927|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)	NM_001083928|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)	NM_009389|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm9_v1_chr9_-_66440640_66440842	2.15874	HIF1A.p2	AK031141|Usp3|235441|ubiquitin specific peptidase 3	NM_144937|Usp3|235441|ubiquitin specific peptidase 3	AK158516|Usp3|235441|ubiquitin specific peptidase 3	AK161676|Usp3|235441|ubiquitin specific peptidase 3
mm9_v1_chr2_+_92024338_92024494	2.15119	HIF1A.p2	NM_138755|Phf21a|192285|PHD finger protein 21A	AB105178|Phf21a|192285|PHD finger protein 21A	AK089411|Phf21a|192285|PHD finger protein 21A	BC019181|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr3_+_32607582_32607695	2.13843	HIF1A.p2	AF041476|Actl6a|56456|actin-like 6A	AK169278|Actl6a|56456|actin-like 6A	AK090154|Actl6a|56456|actin-like 6A	AK167905|Actl6a|56456|actin-like 6A	BC094498|Actl6a|56456|actin-like 6A	AK002724|Actl6a|56456|actin-like 6A	BC001994|Actl6a|56456|actin-like 6A
mm9_v1_chr14_+_31832347_31832368	2.13183	HIF1A.p2	BC023452|Pbrm1|66923|polybromo 1
mm9_v1_chr12_-_70298068_70298133	2.12139	HIF1A.p2	AK075648|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	AK172494|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	EU599049|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	AK012767|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	BC058344|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	AK154254|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene
mm9_v1_chr12_-_104480335_104480355	2.11737	HIF1A.p2	BC145454|Prima1|170952|proline rich membrane anchor 1	BC171927|Prima1|170952|proline rich membrane anchor 1	BC171928|Prima1|170952|proline rich membrane anchor 1	BC171929|Prima1|170952|proline rich membrane anchor 1	BC134395|Prima1|170952|proline rich membrane anchor 1	AK140034|Prima1|170952|proline rich membrane anchor 1	AY043275|Prima1|170952|proline rich membrane anchor 1	AY225515|Prima1|170952|proline rich membrane anchor 1	NM_133364|Prima1|170952|proline rich membrane anchor 1
mm9_v1_chr1_+_122499031_122499257	2.10583	HIF1A.p2	NM_010133|En1|13798|engrailed 1	AK140408|En1|13798|engrailed 1	L12703|En1|13798|engrailed 1
mm9_v1_chr11_+_60351469_60351612	2.0851	HIF1A.p2	AK053695|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK049130|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK169700|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	BC052076|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK053700|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK162072|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK163294|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)
mm9_v1_chr1_-_38186482_38186550	2.08438	HIF1A.p2	BC058093|Rev1|56210|REV1 homolog (S. cerevisiae)	NM_019570|Rev1|56210|REV1 homolog (S. cerevisiae)	AK048838|Rev1|56210|REV1 homolog (S. cerevisiae)
mm9_v1_chr8_-_123112974_123112989	2.08046	HIF1A.p2	BC082565|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)	NM_178856|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)	AK014776|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)	AK030758|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)
mm9_v1_chr1_-_120950111_120950195	2.03205	HIF1A.p2	BC085190|Gli2|14633|GLI-Kruppel family member GLI2	BC082604|Gli2|14633|GLI-Kruppel family member GLI2	NM_001081125|Gli2|14633|GLI-Kruppel family member GLI2
mm9_v1_chr6_-_39507593_39507744	1.99853	HIF1A.p2	AK160784|Dennd2a|209773|DENN/MADD domain containing 2A	AK167298|Dennd2a|209773|DENN/MADD domain containing 2A	AK165202|Dennd2a|209773|DENN/MADD domain containing 2A	BC056367|Dennd2a|209773|DENN/MADD domain containing 2A	BC057310|Dennd2a|209773|DENN/MADD domain containing 2A	AK047138|Dennd2a|209773|DENN/MADD domain containing 2A
mm9_v1_chr6_-_97010364_97010406	1.99726	HIF1A.p2	BC089490|Fam19a4|320701|family with sequence similarity 19, member A4	AK081531|Fam19a4|320701|family with sequence similarity 19, member A4	AK084114|Fam19a4|320701|family with sequence similarity 19, member A4	NM_177233|Fam19a4|320701|family with sequence similarity 19, member A4	AK149355|Fam19a4|320701|family with sequence similarity 19, member A4
mm9_v1_chr8_+_34842304_34842440	1.99676	HIF1A.p2	AK158783|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	NM_001167921|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	AK150415|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	AK153370|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr16_-_22163035_22163154	1.97394	HIF1A.p2	AY531659|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	AK077404|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	BC023758|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	AK049196|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	BC054552|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	AK159654|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2
mm9_v1_chr13_-_21532756_21532926	1.95655	HIF1A.p2	BC089360|Pgbd1|319207|piggyBac transposable element derived 1	BC059882|Pgbd1|319207|piggyBac transposable element derived 1	NM_001012311|Pgbd1|319207|piggyBac transposable element derived 1	NM_001162920|Pgbd1|319207|piggyBac transposable element derived 1	AK076559|Pgbd1|319207|piggyBac transposable element derived 1
mm9_v1_chr19_+_36908682_36908797	1.95106	HIF1A.p2	NM_001163635|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm9_v1_chr5_-_134790544_134790615	1.93047	HIF1A.p2	AF017085|Gtf2i|14886|general transcription factor II I	AY030290|Gtf2i|14886|general transcription factor II I	AY030291|Gtf2i|14886|general transcription factor II I	AY030292|Gtf2i|14886|general transcription factor II I	AY030293|Gtf2i|14886|general transcription factor II I	AK147201|Gtf2i|14886|general transcription factor II I	BC053044|Gtf2i|14886|general transcription factor II I	NM_001080746|Gtf2i|14886|general transcription factor II I	NM_001080747|Gtf2i|14886|general transcription factor II I	NM_001080748|Gtf2i|14886|general transcription factor II I	NM_001080749|Gtf2i|14886|general transcription factor II I	NM_010365|Gtf2i|14886|general transcription factor II I
mm9_v1_chr7_+_104936996_104937097	1.9298	HIF1A.p2	AK078711|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1
mm9_v1_chr8_+_109127245_109127278	1.92392	HIF1A.p2	AK076369|Cdh1|12550|cadherin 1	AK166267|Cdh1|12550|cadherin 1	NM_009864|Cdh1|12550|cadherin 1	BC098501|Cdh1|12550|cadherin 1
mm9_v1_chr5_+_73398142_73398230	1.92155	HIF1A.p2	AK087479|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	AK149202|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	NM_173403|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC132529|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	BC138048|Slc10a4|231290|solute carrier family 10 (sodium/bile acid cotransporter family), member 4
mm9_v1_chr15_-_93167238_93167272	1.91428	HIF1A.p2	BC002192|Yaf2|67057|YY1 associated factor 2
mm9_v1_chr11_-_57981970_57982020	1.91264	HIF1A.p2	AK049216|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC137802|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144921|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144922|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK143536|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK131137|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr12_-_103196366_103196464	1.90738	HIF1A.p2	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr9_+_110235785_110235800	1.89509	HIF1A.p2	NM_001001144|Scap|235623|SREBF chaperone	NM_001103162|Scap|235623|SREBF chaperone
mm9_v1_chr11_+_97177029_97177191	1.87074	HIF1A.p2	NM_025927|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011163|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011605|Mrpl45|67036|mitochondrial ribosomal protein L45	AK081922|Mrpl45|67036|mitochondrial ribosomal protein L45	AK157771|Mrpl45|67036|mitochondrial ribosomal protein L45	BC020130|Mrpl45|67036|mitochondrial ribosomal protein L45	AK198473|Mrpl45|67036|mitochondrial ribosomal protein L45
mm9_v1_chr7_-_112884969_112885029	1.85873	HIF1A.p2	AK172224|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK172189|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	BC046799|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK005138|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	NM_025897|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK013462|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK077786|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	BC022923|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)
mm9_v1_chr15_-_75739695_75739776	1.85699	HIF1A.p2	BC082536|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	BC079855|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	BC013059|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK017616|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK044934|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK054335|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AF304351|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK017796|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK010347|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	NM_023240|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	NM_029663|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm9_v1_chr5_+_145016060_145016213	1.84484	HIF1A.p2	AK049027|Bri3|55950|brain protein I3	NM_018772|Bri3|55950|brain protein I3	AK080467|Bri3|55950|brain protein I3	BC005677|Bri3|55950|brain protein I3	BC095955|Bri3|55950|brain protein I3	BC021149|Bri3|55950|brain protein I3	AF106967|Bri3|55950|brain protein I3
mm9_v1_chr16_+_20672770_20672837	1.82891	HIF1A.p2	AK081982|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_001005331|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_145941|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr4_-_22415444_22415519	1.81959	HIF1A.p2	X66602|Pou3f2|18992|POU domain, class 3, transcription factor 2
mm9_v1_chr5_-_52581705_52581765	1.81928	HIF1A.p2	BC003745|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC100343|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK146441|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK145983|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK151015|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK151757|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK149869|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK168323|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK168835|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK169174|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	NM_001042620|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	NM_007839|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr10_+_36694322_36694389	1.80724	HIF1A.p2	AK165734|Hdac2|15182|histone deacetylase 2	NM_008229|Hdac2|15182|histone deacetylase 2	AK051753|Hdac2|15182|histone deacetylase 2	BC138517|Hdac2|15182|histone deacetylase 2	U31758|Hdac2|15182|histone deacetylase 2
mm9_v1_chr17_-_26232411_26232456	1.79788	HIF1A.p2	AF153451|Nme4|56520|non-metastatic cells 4, protein expressed in	NM_019731|Nme4|56520|non-metastatic cells 4, protein expressed in	AK011573|Nme4|56520|non-metastatic cells 4, protein expressed in	AK017724|Nme4|56520|non-metastatic cells 4, protein expressed in	AF288690|Nme4|56520|non-metastatic cells 4, protein expressed in	BC027277|Nme4|56520|non-metastatic cells 4, protein expressed in	AK012805|Nme4|56520|non-metastatic cells 4, protein expressed in
mm9_v1_chr17_+_10512744_10512791	1.79689	HIF1A.p2	AK012373|B930003M22Rik|100526796|RIKEN cDNA B930003M22 gene	AK046926|B930003M22Rik|100526796|RIKEN cDNA B930003M22 gene
mm9_v1_chr5_-_4104331_4104507	1.78599	HIF1A.p2	AK028355|Cyp51|13121|cytochrome P450, family 51	BC031813|Cyp51|13121|cytochrome P450, family 51	AK031059|Cyp51|13121|cytochrome P450, family 51	AK075764|Cyp51|13121|cytochrome P450, family 51	AK076983|Cyp51|13121|cytochrome P450, family 51	AF166266|Cyp51|13121|cytochrome P450, family 51	AK028815|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr2_+_27741864_27742035	1.76241	HIF1A.p2	NM_015734|Col5a1|12831|collagen, type V, alpha 1
mm9_v1_chr4_+_131429522_131429622	1.76098	HIF1A.p2	NM_020587|Srsf4|57317|serine/arginine-rich splicing factor 4	AK077648|Srsf4|57317|serine/arginine-rich splicing factor 4	AK075769|Srsf4|57317|serine/arginine-rich splicing factor 4	BC019437|Srsf4|57317|serine/arginine-rich splicing factor 4	AK156989|Srsf4|57317|serine/arginine-rich splicing factor 4
mm9_v1_chr5_-_8422533_8422723	1.75482	HIF1A.p2	BC138709|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC138710|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC145392|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AJ003132|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC069983|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AK132403|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AK014480|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC050827|Dbf4|27214|DBF4 homolog (S. cerevisiae)	NM_001190717|Dbf4|27214|DBF4 homolog (S. cerevisiae)	NM_013726|Dbf4|27214|DBF4 homolog (S. cerevisiae)
mm9_v1_chr1_+_61685397_61685574	1.72424	HIF1A.p2	AK013352|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	NM_001081050|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK051398|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK031487|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK141451|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK008055|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)
mm9_v1_chr13_-_99660903_99660996	1.72152	HIF1A.p2	BC055372|Tnpo1|238799|transportin 1	AK167049|Tnpo1|238799|transportin 1	AK045132|Tnpo1|238799|transportin 1	NM_001048267|Tnpo1|238799|transportin 1
mm9_v1_chr19_+_41557126_41557136	1.71917	HIF1A.p2	AK155007|Lcor|212391|ligand dependent nuclear receptor corepressor	BC099938|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr2_+_156665812_156665874	1.71752	HIF1A.p2	AK029490|Tgif2|228839|TGFB-induced factor homeobox 2	NM_173396|Tgif2|228839|TGFB-induced factor homeobox 2	BC138706|Tgif2|228839|TGFB-induced factor homeobox 2	BC138705|Tgif2|228839|TGFB-induced factor homeobox 2	AK157623|Tgif2|228839|TGFB-induced factor homeobox 2	AK017884|Tgif2|228839|TGFB-induced factor homeobox 2
mm9_v1_chr11_+_23978029_23978056	1.70928	HIF1A.p2	AK166352|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_001159289|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_016707|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr5_+_137791368_137791732	1.70496	HIF1A.p2	AK143422|Ephb4|13846|Eph receptor B4	BC016505|Ephb4|13846|Eph receptor B4	AK046884|Ephb4|13846|Eph receptor B4	BC090839|Ephb4|13846|Eph receptor B4	U06834|Ephb4|13846|Eph receptor B4	BC013342|Ephb4|13846|Eph receptor B4
mm9_v1_chr2_+_19367264_19367426	1.69662	HIF1A.p2	AK007922|Ptf1a|19213|pancreas specific transcription factor, 1a	AB035675|Ptf1a|19213|pancreas specific transcription factor, 1a	NM_018809|Ptf1a|19213|pancreas specific transcription factor, 1a	BC132505|Ptf1a|19213|pancreas specific transcription factor, 1a	BC138507|Ptf1a|19213|pancreas specific transcription factor, 1a
mm9_v1_chr8_-_59966523_59966681	1.67425	HIF1A.p2	BC132081|Sap30|60406|sin3 associated polypeptide	BC132087|Sap30|60406|sin3 associated polypeptide	AK088745|Sap30|60406|sin3 associated polypeptide	BC037768|Sap30|60406|sin3 associated polypeptide	AF075136|Sap30|60406|sin3 associated polypeptide	AK010928|Sap30|60406|sin3 associated polypeptide	NM_021788|Sap30|60406|sin3 associated polypeptide
mm9_v1_chr19_+_47654060_47654223	1.66106	HIF1A.p2	AK122218|Slk|20874|STE20-like kinase (yeast)
mm9_v1_chr12_+_107022903_107023027	1.65901	HIF1A.p2	NM_011112|Papola|18789|poly (A) polymerase alpha	AK028940|Papola|18789|poly (A) polymerase alpha	AK090096|Papola|18789|poly (A) polymerase alpha	AK132704|Papola|18789|poly (A) polymerase alpha	AK134552|Papola|18789|poly (A) polymerase alpha	BC060128|Papola|18789|poly (A) polymerase alpha	U58134|Papola|18789|poly (A) polymerase alpha	U52197|Papola|18789|poly (A) polymerase alpha
mm9_v1_chr1_+_91351373_91351428	1.65506	HIF1A.p2	AK147503|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_001037136|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_178119|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK046523|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK129289|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr16_+_44724394_44724433	1.65403	HIF1A.p2	NM_145972|BC027231|212547|cDNA sequence BC027231	BC027231|BC027231|212547|cDNA sequence BC027231	AK144612|BC027231|212547|cDNA sequence BC027231
mm9_v1_chr12_-_85559793_85559836	1.63772	HIF1A.p2	AK155768|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	NM_001163501|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene
mm9_v1_chr9_+_54997159_54997206	1.63717	HIF1A.p2	AK042515|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	NM_180600|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	AK083216|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2
mm9_v1_chr3_+_152058937_152059038	1.63345	HIF1A.p2	NM_001080755|Zzz3|108946|zinc finger, ZZ domain containing 3	AK131150|Zzz3|108946|zinc finger, ZZ domain containing 3
mm9_v1_chr7_+_54101226_54101257	1.62554	HIF1A.p2	BC066858|Ldha|16828|lactate dehydrogenase A	BC094019|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr3_-_83844042_83844096	1.61281	HIF1A.p2	AY662647|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK053888|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK051240|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK137619|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	BC062940|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK052409|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK153996|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK154818|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	NM_172681|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK086232|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene
mm9_v1_chr4_+_118781336_118781380	1.6122	HIF1A.p2	NM_011400|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	M23384|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	BC055340|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1
mm9_v1_chr15_+_98956940_98957052	1.60485	HIF1A.p2	BC072579|Spats2|72572|spermatogenesis associated, serine-rich 2
mm9_v1_chr4_-_131978279_131978374	1.59811	HIF1A.p2	BC096033|Phactr4|100169|phosphatase and actin regulator 4	AK049209|Phactr4|100169|phosphatase and actin regulator 4	BC075672|Phactr4|100169|phosphatase and actin regulator 4	AK220496|Phactr4|100169|phosphatase and actin regulator 4	NM_001161797|Phactr4|100169|phosphatase and actin regulator 4	NM_175306|Phactr4|100169|phosphatase and actin regulator 4
mm9_v1_chr6_-_116578970_116579010	1.59615	HIF1A.p2	AK152681|Zfp422|67255|zinc finger protein 422	AK082970|Zfp422|67255|zinc finger protein 422	NM_026057|Zfp422|67255|zinc finger protein 422
mm9_v1_chr14_+_32064678_32064794	1.5915	HIF1A.p2	BC050901|Bap1|104416|Brca1 associated protein 1	BC042489|Bap1|104416|Brca1 associated protein 1	AK129108|Bap1|104416|Brca1 associated protein 1	AB047820|Bap1|104416|Brca1 associated protein 1
mm9_v1_chr6_+_64992810_64992853	1.58796	HIF1A.p2	AK134442|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK011724|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK122454|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr5_+_30431701_30431755	1.58758	HIF1A.p2	NM_001167879|Fam59b|242915|family with sequence similarity 59, member B
mm9_v1_chrX_-_7651846_7651885	1.58747	HIF1A.p2	AK139757|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK169592|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	NM_011514|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)
mm9_v1_chr5_-_111082387_111082407	1.58416	HIF1A.p2	BC024616|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK146006|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK088355|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK052601|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	NM_153570|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK090024|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)
mm9_v1_chr1_-_39634096_39634285	1.55374	HIF1A.p2	BC115968|Rnf149|67702|ring finger protein 149	NM_001033135|Rnf149|67702|ring finger protein 149	AK155360|Rnf149|67702|ring finger protein 149
mm9_v1_chr6_+_64992861_64992872	1.54521	HIF1A.p2	AK147884|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr15_-_88971039_88971132	1.54461	HIF1A.p2	BC021640|Mapk12|29857|mitogen-activated protein kinase 12	Y13439|Mapk12|29857|mitogen-activated protein kinase 12	AK011286|Mapk12|29857|mitogen-activated protein kinase 12	AK165741|Mapk12|29857|mitogen-activated protein kinase 12	NM_013871|Mapk12|29857|mitogen-activated protein kinase 12
mm9_v1_chr6_-_134516799_134516866	1.54087	HIF1A.p2	AF074265|Lrp6|16974|low density lipoprotein receptor-related protein 6
mm9_v1_chr14_+_31832340_31832345	1.53946	HIF1A.p2	AK166588|Pbrm1|66923|polybromo 1
mm9_v1_chr11_+_32247758_32247888	1.53464	HIF1A.p2	NM_177364|Sh3pxd2b|268396|SH3 and PX domains 2B	AK169978|Sh3pxd2b|268396|SH3 and PX domains 2B	AK220175|Sh3pxd2b|268396|SH3 and PX domains 2B	AK090119|Sh3pxd2b|268396|SH3 and PX domains 2B	AK042261|Sh3pxd2b|268396|SH3 and PX domains 2B	BC141306|Sh3pxd2b|268396|SH3 and PX domains 2B	AK043324|Sh3pxd2b|268396|SH3 and PX domains 2B	AK089330|Sh3pxd2b|268396|SH3 and PX domains 2B	AK163471|Sh3pxd2b|268396|SH3 and PX domains 2B	AK171384|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115711|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115764|Sh3pxd2b|268396|SH3 and PX domains 2B	AK154898|Sh3pxd2b|268396|SH3 and PX domains 2B	AB430861|Sh3pxd2b|268396|SH3 and PX domains 2B
mm9_v1_chr14_+_21871781_21871860	1.53238	HIF1A.p2	AK009508|Adk|11534|adenosine kinase	AK157662|Adk|11534|adenosine kinase	AK028100|Adk|11534|adenosine kinase	AK139200|Adk|11534|adenosine kinase	AK032871|Adk|11534|adenosine kinase	BC009659|Adk|11534|adenosine kinase	NM_134079|Adk|11534|adenosine kinase	AY540996|Adk|11534|adenosine kinase
mm9_v1_chr7_+_28964518_28964559	1.53005	HIF1A.p2	AK148342|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr14_-_31832165_31832254	1.52211	HIF1A.p2	BC037996|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AY181025|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AY185498|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK087757|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK167183|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	BC018560|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK077523|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)
mm9_v1_chr10_-_68815606_68815685	1.51717	HIF1A.p2	BC024396|Cdk1|12534|cyclin-dependent kinase 1	AK168054|Cdk1|12534|cyclin-dependent kinase 1	AK030231|Cdk1|12534|cyclin-dependent kinase 1	NM_007659|Cdk1|12534|cyclin-dependent kinase 1	AK135516|Cdk1|12534|cyclin-dependent kinase 1	U58633|Cdk1|12534|cyclin-dependent kinase 1	AK051859|Cdk1|12534|cyclin-dependent kinase 1
mm9_v1_chr17_+_35035395_35035464	1.5161	HIF1A.p2	BC058357|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	AB077209|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	NM_147151|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2
mm9_v1_chr4_-_21612991_21613109	1.51258	HIF1A.p2	AK149252|Prdm13|230025|PR domain containing 13	BC017632|Prdm13|230025|PR domain containing 13	NM_001080771|Prdm13|230025|PR domain containing 13
mm9_v1_chr4_-_133801438_133801522	1.51236	HIF1A.p2	AK156931|Zfp593|68040|zinc finger protein 593	BC003465|Zfp593|68040|zinc finger protein 593	AK014081|Zfp593|68040|zinc finger protein 593	AK133585|Zfp593|68040|zinc finger protein 593	AK005247|Zfp593|68040|zinc finger protein 593	NM_024215|Zfp593|68040|zinc finger protein 593
mm9_v1_chr6_-_89312545_89312689	1.51211	HIF1A.p2	D86948|Plxna1|18844|plexin A1	NM_008881|Plxna1|18844|plexin A1
mm9_v1_chr9_+_107456969_107456986	1.50723	HIF1A.p2	BC002173|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1	NM_019713|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1
mm9_v1_chr2_+_30141908_30141954	1.50247	HIF1A.p2	BC028665|Nup188|227699|nucleoporin 188	AK052272|Nup188|227699|nucleoporin 188	BC032090|Nup188|227699|nucleoporin 188	BC096591|Nup188|227699|nucleoporin 188	AK129073|Nup188|227699|nucleoporin 188	NM_198304|Nup188|227699|nucleoporin 188
mm9_v1_chr11_-_60624592_60624671	1.50195	HIF1A.p2	AF237702|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	X94478|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	X94479|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	BC026055|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	AK132342|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	AK010439|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)
mm9_v1_chr1_-_145549903_145549945	1.50036	HIF1A.p2	BC027756|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK080861|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr2_-_174264400_174264522	1.4898	HIF1A.p2	AK008370|Ctsz|64138|cathepsin Z	AF197479|Ctsz|64138|cathepsin Z	AK150329|Ctsz|64138|cathepsin Z	AK150894|Ctsz|64138|cathepsin Z	AK153147|Ctsz|64138|cathepsin Z	AK159826|Ctsz|64138|cathepsin Z	AK151440|Ctsz|64138|cathepsin Z	AK159118|Ctsz|64138|cathepsin Z	AK002710|Ctsz|64138|cathepsin Z	AK151585|Ctsz|64138|cathepsin Z	AK151994|Ctsz|64138|cathepsin Z	AK160001|Ctsz|64138|cathepsin Z	AK160028|Ctsz|64138|cathepsin Z	AK166047|Ctsz|64138|cathepsin Z	AK170963|Ctsz|64138|cathepsin Z	AK150947|Ctsz|64138|cathepsin Z	AK010912|Ctsz|64138|cathepsin Z	AK004095|Ctsz|64138|cathepsin Z	BC008619|Ctsz|64138|cathepsin Z	NM_022325|Ctsz|64138|cathepsin Z	AJ242663|Ctsz|64138|cathepsin Z	AF136277|Ctsz|64138|cathepsin Z	AK159618|Ctsz|64138|cathepsin Z	AK160354|Ctsz|64138|cathepsin Z
mm9_v1_chr2_+_158620555_158620616	1.48921	HIF1A.p2	BC029709|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	NM_145742|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	AK156955|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	AK155482|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	AK170952|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	AK004665|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35
mm9_v1_chr1_-_163181313_163181346	1.48822	HIF1A.p2	AK157820|Prdx6|11758|peroxiredoxin 6	Y12883|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr3_-_142544883_142544984	1.48353	HIF1A.p2	AK046248|Pkn2|109333|protein kinase N2	AK171092|Pkn2|109333|protein kinase N2	BC052073|Pkn2|109333|protein kinase N2	AK077910|Pkn2|109333|protein kinase N2	AK028469|Pkn2|109333|protein kinase N2	AK049713|Pkn2|109333|protein kinase N2	AK133298|Pkn2|109333|protein kinase N2	NM_178654|Pkn2|109333|protein kinase N2
mm9_v1_chrX_+_93291377_93291457	1.47935	HIF1A.p2	AK133819|Msn|17698|moesin	AK145746|Msn|17698|moesin	AK150869|Msn|17698|moesin	AK153210|Msn|17698|moesin	NM_010833|Msn|17698|moesin	AK031171|Msn|17698|moesin	S47577|Msn|17698|moesin	BC047366|Msn|17698|moesin	AK157701|Msn|17698|moesin	AK087001|Msn|17698|moesin	AK088336|Msn|17698|moesin
mm9_v1_chr2_+_27370649_27370751	1.47837	HIF1A.p2	NM_080848|Wdr5|140858|WD repeat domain 5	BC025801|Wdr5|140858|WD repeat domain 5	AK075937|Wdr5|140858|WD repeat domain 5	AK144091|Wdr5|140858|WD repeat domain 5	BC016103|Wdr5|140858|WD repeat domain 5
mm9_v1_chr19_+_7049639_7049662	1.4765	HIF1A.p2	BC125654|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	BC125650|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm9_v1_chr11_+_117710532_117710668	1.46297	HIF1A.p2	NM_001012273|Birc5|11799|baculoviral IAP repeat-containing 5	NM_009689|Birc5|11799|baculoviral IAP repeat-containing 5	AB013819|Birc5|11799|baculoviral IAP repeat-containing 5	AK018022|Birc5|11799|baculoviral IAP repeat-containing 5	BC004702|Birc5|11799|baculoviral IAP repeat-containing 5	AK142768|Birc5|11799|baculoviral IAP repeat-containing 5	AF077349|Birc5|11799|baculoviral IAP repeat-containing 5	EU366955|Birc5|11799|baculoviral IAP repeat-containing 5
mm9_v1_chr3_-_146184337_146184397	1.46241	HIF1A.p2	BC056165|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK171035|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	BC089369|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK008988|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK171079|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK010079|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	NM_027332|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	NM_027371|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK162073|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)
mm9_v1_chr16_+_20141134_20141212	1.45867	HIF1A.p2	NM_001033237|Yeats2|208146|YEATS domain containing 2	NM_001145930|Yeats2|208146|YEATS domain containing 2	NM_001145931|Yeats2|208146|YEATS domain containing 2	AK165933|Yeats2|208146|YEATS domain containing 2	AK160791|Yeats2|208146|YEATS domain containing 2
mm9_v1_chrX_-_159267249_159267385	1.44597	HIF1A.p2	AK162263|Txlng|353170|taxilin gamma	BC080778|Txlng|353170|taxilin gamma	AK161561|Txlng|353170|taxilin gamma	AK031783|Txlng|353170|taxilin gamma	BC059099|Txlng|353170|taxilin gamma	BC117898|Txlng|353170|taxilin gamma	BC117899|Txlng|353170|taxilin gamma	AK030100|Txlng|353170|taxilin gamma	NM_178935|Txlng|353170|taxilin gamma	AK078477|Txlng|353170|taxilin gamma	AK044130|Txlng|353170|taxilin gamma	DQ316984|Txlng|353170|taxilin gamma	DQ320011|Txlng|353170|taxilin gamma
mm9_v1_chr6_+_38501333_38501546	1.44564	HIF1A.p2	AK046307|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK044839|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170848|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170849|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_138680|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK155264|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056383|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056354|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056970|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK166155|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK147889|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AF318301|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK038543|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK048581|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK053863|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK134191|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr12_-_28027272_28027439	1.4441	HIF1A.p2	AB108675|Sox11|20666|SRY-box containing gene 11	BC062095|Sox11|20666|SRY-box containing gene 11	BC053503|Sox11|20666|SRY-box containing gene 11
mm9_v1_chr8_-_49928495_49928639	1.43868	HIF1A.p2	AK013771|2900073C17Rik|73020|RIKEN cDNA 2900073C17 gene
mm9_v1_chr4_-_62186055_62186086	1.43695	HIF1A.p2	BC034004|Pole3|59001|polymerase (DNA directed), epsilon 3 (p17 subunit)
mm9_v1_chr8_-_64238843_64238855	1.42415	HIF1A.p2	BC027364|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr4_-_41688124_41688233	1.41414	HIF1A.p2	AF226605|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AY390764|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AY390765|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AY390766|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AY390768|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AF030198|Sigmar1|18391|sigma non-opioid intracellular receptor 1	BC019930|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AK159886|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AK002718|Sigmar1|18391|sigma non-opioid intracellular receptor 1	BC002000|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AF004927|Sigmar1|18391|sigma non-opioid intracellular receptor 1	NM_011014|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AK154300|Sigmar1|18391|sigma non-opioid intracellular receptor 1
mm9_v1_chrX_-_72661877_72661890	1.41269	HIF1A.p2	NM_001039373|Mtcp1|17763|mature T-cell proliferation 1	NM_010839|Mtcp1|17763|mature T-cell proliferation 1	U32332|Mtcp1|17763|mature T-cell proliferation 1	Z35294|Mtcp1|17763|mature T-cell proliferation 1
mm9_v1_chr2_-_144096518_144096579	1.4106	HIF1A.p2	AK031873|Snx5|69178|sorting nexin 5	AK144710|Snx5|69178|sorting nexin 5	AK169545|Snx5|69178|sorting nexin 5	AK049129|Snx5|69178|sorting nexin 5	AK078776|Snx5|69178|sorting nexin 5	AK169786|Snx5|69178|sorting nexin 5	AK088223|Snx5|69178|sorting nexin 5	AK152311|Snx5|69178|sorting nexin 5
mm9_v1_chr3_-_119486305_119486325	1.4099	HIF1A.p2	AK135738|Ptbp2|56195|polypyrimidine tract binding protein 2	NM_019550|Ptbp2|56195|polypyrimidine tract binding protein 2
mm9_v1_chr18_+_5591869_5591894	1.40289	HIF1A.p2	AK014114|Zeb1|21417|zinc finger E-box binding homeobox 1	U26259|Zeb1|21417|zinc finger E-box binding homeobox 1	BC139768|Zeb1|21417|zinc finger E-box binding homeobox 1	BC139769|Zeb1|21417|zinc finger E-box binding homeobox 1	D76432|Zeb1|21417|zinc finger E-box binding homeobox 1	NM_011546|Zeb1|21417|zinc finger E-box binding homeobox 1	BC090987|Zeb1|21417|zinc finger E-box binding homeobox 1	AK135371|Zeb1|21417|zinc finger E-box binding homeobox 1
mm9_v1_chr12_-_40763924_40763965	1.40102	HIF1A.p2	BC029234|Arl4a|11861|ADP-ribosylation factor-like 4A	BC003725|Arl4a|11861|ADP-ribosylation factor-like 4A	AK168618|Arl4a|11861|ADP-ribosylation factor-like 4A	AK048606|Arl4a|11861|ADP-ribosylation factor-like 4A	AK137751|Arl4a|11861|ADP-ribosylation factor-like 4A	NM_007487|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chrX_+_72661966_72662056	1.40099	HIF1A.p2	NM_001166457|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_001166459|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_145956|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	S68022|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK149844|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK028483|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK030736|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC021313|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK038919|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK011876|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC048179|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3
mm9_v1_chr16_+_14163414_14163441	1.40017	HIF1A.p2	AK012861|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK037289|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK012830|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK146982|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK169743|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)
mm9_v1_chr11_+_68859125_68859285	1.39989	HIF1A.p2	NM_011496|Aurkb|20877|aurora kinase B	AK132006|Aurkb|20877|aurora kinase B	BC003261|Aurkb|20877|aurora kinase B	AK075951|Aurkb|20877|aurora kinase B	U69107|Aurkb|20877|aurora kinase B	AK191945|Aurkb|20877|aurora kinase B
mm9_v1_chr6_-_125115580_125115612	1.39828	HIF1A.p2	BC093508|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083149|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC091768|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC094037|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK191938|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK192040|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK199608|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK201736|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC085315|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC145810|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC145812|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	M32599|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC023196|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092267|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083065|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC095932|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC082592|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092294|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	NM_008084|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083079|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC085275|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083080|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC085274|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092252|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC020407|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092264|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC096440|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC096590|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC110311|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase
mm9_v1_chr3_+_121948541_121948621	1.39376	HIF1A.p2	BC132404|Gclm|14630|glutamate-cysteine ligase, modifier subunit	BC138783|Gclm|14630|glutamate-cysteine ligase, modifier subunit
mm9_v1_chr3_+_87710282_87710350	1.38765	HIF1A.p2	AK017863|Hdgf|15191|hepatoma-derived growth factor	BC021654|Hdgf|15191|hepatoma-derived growth factor	BC005713|Hdgf|15191|hepatoma-derived growth factor	AF251787|Hdgf|15191|hepatoma-derived growth factor
mm9_v1_chr1_+_16655263_16655349	1.38716	HIF1A.p2	NM_026392|Tmem70|70397|transmembrane protein 70	NM_027415|Tmem70|70397|transmembrane protein 70	AK003839|Tmem70|70397|transmembrane protein 70	AK005075|Tmem70|70397|transmembrane protein 70	AK008955|Tmem70|70397|transmembrane protein 70	AK151280|Tmem70|70397|transmembrane protein 70	AK169031|Tmem70|70397|transmembrane protein 70	BC011320|Tmem70|70397|transmembrane protein 70	AK167069|Tmem70|70397|transmembrane protein 70
mm9_v1_chr2_+_151969288_151969344	1.38549	HIF1A.p2	U18658|Tcf15|21407|transcription factor 15	BC027533|Tcf15|21407|transcription factor 15	NM_009328|Tcf15|21407|transcription factor 15
mm9_v1_chr14_-_70205438_70205471	1.38175	HIF1A.p2	AK038196|Rhobtb2|246710|Rho-related BTB domain containing 2
mm9_v1_chr16_+_16213434_16213437	1.36906	HIF1A.p2	AK004650|Pkp2|67451|plakophilin 2	AK004731|Pkp2|67451|plakophilin 2	AK049481|Pkp2|67451|plakophilin 2	AK162000|Pkp2|67451|plakophilin 2	AK167660|Pkp2|67451|plakophilin 2	BC138252|Pkp2|67451|plakophilin 2	BC138253|Pkp2|67451|plakophilin 2	NM_026163|Pkp2|67451|plakophilin 2
mm9_v1_chr19_+_55328356_55328506	1.36491	HIF1A.p2	AK151378|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	BC031544|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK161024|Acsl5|433256|acyl-CoA synthetase long-chain family member 5
mm9_v1_chr13_+_109106530_109106573	1.36271	HIF1A.p2	NM_178683|Depdc1b|218581|DEP domain containing 1B	AK077676|Depdc1b|218581|DEP domain containing 1B	BC152330|Depdc1b|218581|DEP domain containing 1B	BC152331|Depdc1b|218581|DEP domain containing 1B	AK083480|Depdc1b|218581|DEP domain containing 1B	AK036550|Depdc1b|218581|DEP domain containing 1B	AK043283|Depdc1b|218581|DEP domain containing 1B
mm9_v1_chr19_+_36908807_36908893	1.35869	HIF1A.p2	AK047094|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AK163335|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm9_v1_chr3_+_135101664_135101764	1.35225	HIF1A.p2	AK153111|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK152231|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153410|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167801|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK151594|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK032885|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167077|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK090099|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC098220|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC024351|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK004001|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK049906|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_025356|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167650|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159546|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK152541|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159963|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC057941|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK088448|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr6_-_31513817_31513936	1.35116	HIF1A.p2	AB028048|Podxl|27205|podocalyxin-like	AF290209|Podxl|27205|podocalyxin-like	BC052442|Podxl|27205|podocalyxin-like	BC054530|Podxl|27205|podocalyxin-like	NM_013723|Podxl|27205|podocalyxin-like
mm9_v1_chr12_+_79849894_79849915	1.34438	HIF1A.p2	AK133187|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC067404|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr1_+_55145132_55145232	1.34164	HIF1A.p2	AK088121|Hspe1|15528|heat shock protein 1 (chaperonin 10)	U09659|Hspe1|15528|heat shock protein 1 (chaperonin 10)	BC099385|Hspe1|15528|heat shock protein 1 (chaperonin 10)	AK151935|Hspe1|15528|heat shock protein 1 (chaperonin 10)	AK133876|Hspe1|15528|heat shock protein 1 (chaperonin 10)	BC024385|Hspe1|15528|heat shock protein 1 (chaperonin 10)
mm9_v1_chr1_+_140860285_140860402	1.33692	HIF1A.p2	NM_001166501|Dennd1b|329260|DENN/MADD domain containing 1B	BC042698|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr7_-_52241669_52241769	1.33266	HIF1A.p2	BC051547|Prmt1|15469|protein arginine N-methyltransferase 1	BC002249|Prmt1|15469|protein arginine N-methyltransferase 1	AK182363|Prmt1|15469|protein arginine N-methyltransferase 1	AF232716|Prmt1|15469|protein arginine N-methyltransferase 1	AF232717|Prmt1|15469|protein arginine N-methyltransferase 1	AK088790|Prmt1|15469|protein arginine N-methyltransferase 1	NM_019830|Prmt1|15469|protein arginine N-methyltransferase 1	AK020120|Prmt1|15469|protein arginine N-methyltransferase 1	AK146927|Prmt1|15469|protein arginine N-methyltransferase 1	AK164421|Prmt1|15469|protein arginine N-methyltransferase 1	AK146975|Prmt1|15469|protein arginine N-methyltransferase 1	BC051953|Prmt1|15469|protein arginine N-methyltransferase 1	BC062964|Prmt1|15469|protein arginine N-methyltransferase 1	AK152342|Prmt1|15469|protein arginine N-methyltransferase 1
mm9_v1_chr7_-_88974235_88974382	1.33216	HIF1A.p2	BC072618|Btbd1|83962|BTB (POZ) domain containing 1	NM_146193|Btbd1|83962|BTB (POZ) domain containing 1	BC087937|Btbd1|83962|BTB (POZ) domain containing 1	AK088345|Btbd1|83962|BTB (POZ) domain containing 1
mm9_v1_chr8_-_123112925_123112969	1.32536	HIF1A.p2	AK028375|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)
mm9_v1_chr16_+_20498889_20499013	1.32505	HIF1A.p2	AK145801|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	NM_172265|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	BC038620|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	BC027268|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	AK160985|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	BC085255|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon
mm9_v1_chr9_-_34983552_34983647	1.32293	HIF1A.p2	AK171018|Dcps|69305|decapping enzyme, scavenger	AK005584|Dcps|69305|decapping enzyme, scavenger	NM_027030|Dcps|69305|decapping enzyme, scavenger	AY040775|Dcps|69305|decapping enzyme, scavenger	AK169641|Dcps|69305|decapping enzyme, scavenger	BC016273|Dcps|69305|decapping enzyme, scavenger	AK078253|Dcps|69305|decapping enzyme, scavenger
mm9_v1_chr10_-_61949345_61949552	1.32271	HIF1A.p2	AK028096|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	NM_001113355|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK086851|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK150244|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK151360|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	BC007148|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK149859|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	BC058236|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK147989|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK152424|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK165853|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	S41204|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK159783|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK167592|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK168537|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK168213|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	NM_133672|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)
mm9_v1_chr2_-_44965603_44965763	1.31721	HIF1A.p2	AK012377|Zeb2|24136|zinc finger E-box binding homeobox 2	AF033116|Zeb2|24136|zinc finger E-box binding homeobox 2	AK141157|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr7_+_105851755_105851872	1.31093	HIF1A.p2	AK013663|Prkrir|72981|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC049103|Prkrir|72981|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_028410|Prkrir|72981|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
mm9_v1_chr5_+_77694506_77694565	1.30643	HIF1A.p2	AK004945|Rest|19712|RE1-silencing transcription factor	NM_011263|Rest|19712|RE1-silencing transcription factor	AK156514|Rest|19712|RE1-silencing transcription factor
mm9_v1_chr9_+_92437056_92437289	1.2986	HIF1A.p2	AK046364|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	NM_001142916|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	NM_011961|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK033363|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK157207|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK042433|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	BC021352|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AF080572|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr6_-_6167034_6167063	1.29573	HIF1A.p2	AK002829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK012670|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr2_+_154959216_154959300	1.29209	HIF1A.p2	NM_008395|Itch|16396|itchy, E3 ubiquitin protein ligase	AK082003|Itch|16396|itchy, E3 ubiquitin protein ligase	AK163006|Itch|16396|itchy, E3 ubiquitin protein ligase	AK141800|Itch|16396|itchy, E3 ubiquitin protein ligase	AK037940|Itch|16396|itchy, E3 ubiquitin protein ligase	BC062934|Itch|16396|itchy, E3 ubiquitin protein ligase	AK020167|Itch|16396|itchy, E3 ubiquitin protein ligase	AK220164|Itch|16396|itchy, E3 ubiquitin protein ligase	AK048303|Itch|16396|itchy, E3 ubiquitin protein ligase	BC064678|Itch|16396|itchy, E3 ubiquitin protein ligase	AF037454|Itch|16396|itchy, E3 ubiquitin protein ligase
mm9_v1_chr14_-_45938187_45938229	1.28948	HIF1A.p2	BC025102|Ero1l|50527|ERO1-like (S. cerevisiae)	NM_015774|Ero1l|50527|ERO1-like (S. cerevisiae)	AK159217|Ero1l|50527|ERO1-like (S. cerevisiae)
mm9_v1_chr5_+_135644245_135644412	1.28787	HIF1A.p2	AK160439|Bcl7b|12054|B-cell CLL/lymphoma 7B	AK131643|Bcl7b|12054|B-cell CLL/lymphoma 7B	AK155076|Bcl7b|12054|B-cell CLL/lymphoma 7B	AJ011145|Bcl7b|12054|B-cell CLL/lymphoma 7B	AK186334|Bcl7b|12054|B-cell CLL/lymphoma 7B
mm9_v1_chr5_+_148000271_148000302	1.28647	HIF1A.p2	NM_008178|Gsx1|14842|GS homeobox 1	U21224|Gsx1|14842|GS homeobox 1	BC137769|Gsx1|14842|GS homeobox 1
mm9_v1_chr16_-_78576898_78576912	1.28255	HIF1A.p2	AK009258|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed	NM_025967|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed
mm9_v1_chr16_+_20672847_20672848	1.27842	HIF1A.p2	AK134557|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr4_+_46463917_46464167	1.2765	HIF1A.p2	AK165807|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	BC003489|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	BC005628|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	NM_130889|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	BC093506|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	AK136648|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	AB025582|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
mm9_v1_chr4_-_138908210_138908289	1.27596	HIF1A.p2	AK011387|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC005734|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	NM_023536|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	AK171445|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC096556|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC138221|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC145205|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC145209|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)
mm9_v1_chr5_-_111082269_111082383	1.27592	HIF1A.p2	AK184847|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK172310|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)
mm9_v1_chr2_+_91366966_91366992	1.27398	HIF1A.p2	AK014169|Ckap5|75786|cytoskeleton associated protein 5
mm9_v1_chr4_+_118781405_118781458	1.27139	HIF1A.p2	AK155252|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	AK170425|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	AK089353|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	AK170873|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	M22998|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1
mm9_v1_chr17_+_32173346_32173404	1.27129	HIF1A.p2	
mm9_v1_chr12_+_60232459_60232573	1.26737	HIF1A.p2	AK208297|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr10_+_79317409_79317433	1.25939	HIF1A.p2	AK033319|Ptbp1|19205|polypyrimidine tract binding protein 1	AK041143|Ptbp1|19205|polypyrimidine tract binding protein 1	AK051669|Ptbp1|19205|polypyrimidine tract binding protein 1	AK088126|Ptbp1|19205|polypyrimidine tract binding protein 1	AK036745|Ptbp1|19205|polypyrimidine tract binding protein 1	AK050498|Ptbp1|19205|polypyrimidine tract binding protein 1	AK053926|Ptbp1|19205|polypyrimidine tract binding protein 1	AK088483|Ptbp1|19205|polypyrimidine tract binding protein 1	AK149941|Ptbp1|19205|polypyrimidine tract binding protein 1	AK168359|Ptbp1|19205|polypyrimidine tract binding protein 1	BC028848|Ptbp1|19205|polypyrimidine tract binding protein 1	X52101|Ptbp1|19205|polypyrimidine tract binding protein 1	BC086489|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr12_-_109513626_109513626	1.25857	HIF1A.p2	NM_001159910|Ccdc85c|668158|coiled-coil domain containing 85C
mm9_v1_chr11_-_77326748_77326921	1.25684	HIF1A.p2	BC147324|Trp53i13|216964|transformation related protein 53 inducible protein 13	BC147325|Trp53i13|216964|transformation related protein 53 inducible protein 13	NM_001024920|Trp53i13|216964|transformation related protein 53 inducible protein 13
mm9_v1_chr11_-_33063024_33063083	1.24885	HIF1A.p2	BC085278|Npm1|18148|nucleophosmin 1	BC092378|Npm1|18148|nucleophosmin 1	M33212|Npm1|18148|nucleophosmin 1	NM_008722|Npm1|18148|nucleophosmin 1	BC054755|Npm1|18148|nucleophosmin 1	BC090843|Npm1|18148|nucleophosmin 1	AK088923|Npm1|18148|nucleophosmin 1	AK145124|Npm1|18148|nucleophosmin 1	AK150164|Npm1|18148|nucleophosmin 1	AK153901|Npm1|18148|nucleophosmin 1	AK005498|Npm1|18148|nucleophosmin 1	AK028253|Npm1|18148|nucleophosmin 1	AK135517|Npm1|18148|nucleophosmin 1	AK145813|Npm1|18148|nucleophosmin 1	BC089546|Npm1|18148|nucleophosmin 1	AK005420|Npm1|18148|nucleophosmin 1	AK028370|Npm1|18148|nucleophosmin 1	AK165860|Npm1|18148|nucleophosmin 1	GU214027|Npm1|18148|nucleophosmin 1
mm9_v1_chr5_+_130231003_130231023	1.24616	HIF1A.p2	AK170336|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr8_-_48374715_48374736	1.24512	HIF1A.p2	AK129346|Stox2|71069|storkhead box 2
mm9_v1_chr16_+_35541447_35541447	1.2449	HIF1A.p2	BC052397|Sema5b|20357|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B	NM_013661|Sema5b|20357|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
mm9_v1_chr15_+_89186142_89186276	1.24268	HIF1A.p2	NM_001115132|Ncaph2|52683|non-SMC condensin II complex, subunit H2	NM_025795|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK146642|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK152158|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK012142|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK088294|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK080447|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK153528|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK083981|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK165250|Ncaph2|52683|non-SMC condensin II complex, subunit H2	BC019422|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK037175|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK085584|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK169627|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK163958|Ncaph2|52683|non-SMC condensin II complex, subunit H2	BC003900|Ncaph2|52683|non-SMC condensin II complex, subunit H2	AK002487|Ncaph2|52683|non-SMC condensin II complex, subunit H2
mm9_v1_chr19_+_47654508_47654642	1.24189	HIF1A.p2	AF039574|Slk|20874|STE20-like kinase (yeast)	NM_001164639|Slk|20874|STE20-like kinase (yeast)	NM_009289|Slk|20874|STE20-like kinase (yeast)	BC131674|Slk|20874|STE20-like kinase (yeast)	BC131675|Slk|20874|STE20-like kinase (yeast)	AF112855|Slk|20874|STE20-like kinase (yeast)	AK029491|Slk|20874|STE20-like kinase (yeast)
mm9_v1_chr1_-_155179844_155179930	1.24106	HIF1A.p2	J02930|Lamc1|226519|laminin, gamma 1	AK144233|Lamc1|226519|laminin, gamma 1	J03484|Lamc1|226519|laminin, gamma 1	NM_010683|Lamc1|226519|laminin, gamma 1
mm9_v1_chr15_+_34425046_34425096	1.24041	HIF1A.p2	NM_026340|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	NM_152894|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	AK016547|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	BC034742|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	AK018297|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
mm9_v1_chr5_-_34000546_34000589	1.23532	HIF1A.p2	AK172044|Tmem129|68366|transmembrane protein 129
mm9_v1_chr4_-_55545337_55545348	1.22979	HIF1A.p2	U70662|Klf4|16600|Kruppel-like factor 4 (gut)	AK144942|Klf4|16600|Kruppel-like factor 4 (gut)	AK155343|Klf4|16600|Kruppel-like factor 4 (gut)	NM_010637|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr16_-_78576873_78576891	1.22916	HIF1A.p2	AK005829|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed	BC019957|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed
mm9_v1_chr1_-_177622696_177622762	1.22307	HIF1A.p2	AK132822|Opn3|13603|opsin 3	BC104486|Opn3|13603|opsin 3	BC104487|Opn3|13603|opsin 3	BC105646|Opn3|13603|opsin 3	BC105919|Opn3|13603|opsin 3	BC139805|Opn3|13603|opsin 3	AF140241|Opn3|13603|opsin 3	NM_010098|Opn3|13603|opsin 3	AK043135|Opn3|13603|opsin 3
mm9_v1_chr6_-_13627853_13628000	1.22301	HIF1A.p2	BC145708|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	BC145710|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK170526|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK046745|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	NM_175312|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene
mm9_v1_chr9_-_8004450_8004510	1.2198	HIF1A.p2	BC039125|Yap1|22601|yes-associated protein 1	AK198743|Yap1|22601|yes-associated protein 1
mm9_v1_chr17_-_47970167_47970209	1.21631	HIF1A.p2	U57822|Mdfi|17240|MyoD family inhibitor	BC006018|Mdfi|17240|MyoD family inhibitor	NM_010783|Mdfi|17240|MyoD family inhibitor	U57821|Mdfi|17240|MyoD family inhibitor
mm9_v1_chr14_-_21871647_21871707	1.212	HIF1A.p2	AF242857|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit	NM_018829|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chrX_+_54307050_54307082	1.20387	HIF1A.p2	AK011234|Htatsf1|72459|HIV TAT specific factor 1	AK005527|Htatsf1|72459|HIV TAT specific factor 1	AK139853|Htatsf1|72459|HIV TAT specific factor 1	AK049495|Htatsf1|72459|HIV TAT specific factor 1
mm9_v1_chr16_+_20672854_20672888	1.20122	HIF1A.p2	AK053144|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK142399|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK133903|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK139371|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK162698|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066038|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr1_-_123464468_123464558	1.19467	HIF1A.p2	AK075864|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC017160|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	AK019845|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC103776|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC141230|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC141231|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	AK012878|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC028246|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	AK012706|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	NM_025860|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
mm9_v1_chr12_+_106923552_106923650	1.19321	HIF1A.p2	NM_178613|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK171097|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	BC031494|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK168962|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK042664|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK079775|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK020785|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK029484|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene
mm9_v1_chr6_-_39156609_39156661	1.19274	HIF1A.p2	AK136209|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145216|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145848|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm9_v1_chr3_+_82859489_82859512	1.18807	HIF1A.p2	BC006750|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	BC052895|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chr17_+_74738475_74738547	1.18304	HIF1A.p2	AK044900|Spast|50850|spastin	AK007793|Spast|50850|spastin
mm9_v1_chr17_+_35137851_35137869	1.18174	HIF1A.p2	NM_011690|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr5_-_135539929_135539990	1.18099	HIF1A.p2	BC093484|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AF412035|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AK003386|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AK011005|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AK151986|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	NM_025375|Wbscr22|66138|Williams Beuren syndrome chromosome region 22
mm9_v1_chr3_+_138106073_138106138	1.17864	HIF1A.p2	AK041792|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	AK159803|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	M84147|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	AK146949|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	AK076507|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	NM_007410|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	BC062879|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	AK002790|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	BC090978|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide
mm9_v1_chr12_+_17551771_17551797	1.1651	HIF1A.p2	AK166093|Odc1|18263|ornithine decarboxylase, structural 1	AK077679|Odc1|18263|ornithine decarboxylase, structural 1	AK139610|Odc1|18263|ornithine decarboxylase, structural 1	AK150283|Odc1|18263|ornithine decarboxylase, structural 1	AK150343|Odc1|18263|ornithine decarboxylase, structural 1	AK152525|Odc1|18263|ornithine decarboxylase, structural 1	AK168219|Odc1|18263|ornithine decarboxylase, structural 1	AK169214|Odc1|18263|ornithine decarboxylase, structural 1	AK172568|Odc1|18263|ornithine decarboxylase, structural 1	S64539|Odc1|18263|ornithine decarboxylase, structural 1	BC083122|Odc1|18263|ornithine decarboxylase, structural 1	BC033264|Odc1|18263|ornithine decarboxylase, structural 1	BC059826|Odc1|18263|ornithine decarboxylase, structural 1
mm9_v1_chr18_+_46757333_46757491	1.16367	HIF1A.p2	AK019451|Eif1a|13664|eukaryotic translation initiation factor 1A	NM_010120|Eif1a|13664|eukaryotic translation initiation factor 1A	AK013268|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150651|Eif1a|13664|eukaryotic translation initiation factor 1A	AF026481|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150673|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150677|Eif1a|13664|eukaryotic translation initiation factor 1A	AK009026|Eif1a|13664|eukaryotic translation initiation factor 1A	AK166368|Eif1a|13664|eukaryotic translation initiation factor 1A	BC027437|Eif1a|13664|eukaryotic translation initiation factor 1A	AK167333|Eif1a|13664|eukaryotic translation initiation factor 1A
mm9_v1_chr3_+_123149830_123150053	1.16122	HIF1A.p2	D89871|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)	NM_008939|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)	BC031429|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)	AK132633|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)	Y13192|Prss12|19142|protease, serine, 12 neurotrypsin (motopsin)
mm9_v1_chr13_+_55736365_55736414	1.16039	HIF1A.p2	AK008639|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	AK137835|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	BC019403|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	NM_145975|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	AK088950|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	BC092240|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	BC028552|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
mm9_v1_chr14_-_51544497_51544585	1.15349	HIF1A.p2	BC002296|Osgep|66246|O-sialoglycoprotein endopeptidase	AK167893|Osgep|66246|O-sialoglycoprotein endopeptidase	AK049955|Osgep|66246|O-sialoglycoprotein endopeptidase	AK005291|Osgep|66246|O-sialoglycoprotein endopeptidase	AK049480|Osgep|66246|O-sialoglycoprotein endopeptidase	AK157554|Osgep|66246|O-sialoglycoprotein endopeptidase	AK166415|Osgep|66246|O-sialoglycoprotein endopeptidase	AK076246|Osgep|66246|O-sialoglycoprotein endopeptidase	AK088346|Osgep|66246|O-sialoglycoprotein endopeptidase	AK142730|Osgep|66246|O-sialoglycoprotein endopeptidase	NM_133676|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr10_-_83996632_83996824	1.15291	HIF1A.p2	NM_175451|Ckap4|216197|cytoskeleton-associated protein 4	BC138318|Ckap4|216197|cytoskeleton-associated protein 4	BC138320|Ckap4|216197|cytoskeleton-associated protein 4	AK132136|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr2_+_72314235_72314311	1.15267	HIF1A.p2	AK028671|Cdca7|66953|cell division cycle associated 7	BC066169|Cdca7|66953|cell division cycle associated 7	AK011289|Cdca7|66953|cell division cycle associated 7	AK167734|Cdca7|66953|cell division cycle associated 7	NM_025866|Cdca7|66953|cell division cycle associated 7	AK153943|Cdca7|66953|cell division cycle associated 7	AK075882|Cdca7|66953|cell division cycle associated 7
mm9_v1_chr7_+_144629288_144629354	1.15259	HIF1A.p2	AK167672|Glrx3|30926|glutaredoxin 3	AK010354|Glrx3|30926|glutaredoxin 3	AK017371|Glrx3|30926|glutaredoxin 3	NM_023140|Glrx3|30926|glutaredoxin 3	AF118650|Glrx3|30926|glutaredoxin 3	AK051468|Glrx3|30926|glutaredoxin 3	BC087885|Glrx3|30926|glutaredoxin 3	AK152446|Glrx3|30926|glutaredoxin 3	AK152634|Glrx3|30926|glutaredoxin 3	AK155190|Glrx3|30926|glutaredoxin 3	BC033506|Glrx3|30926|glutaredoxin 3	AK147158|Glrx3|30926|glutaredoxin 3
mm9_v1_chr9_+_110235804_110235881	1.15153	HIF1A.p2	AK150275|Scap|235623|SREBF chaperone	AK152478|Scap|235623|SREBF chaperone	AK153330|Scap|235623|SREBF chaperone	BC072633|Scap|235623|SREBF chaperone	BC070437|Scap|235623|SREBF chaperone	AK146658|Scap|235623|SREBF chaperone
mm9_v1_chr1_-_169215216_169215257	1.15149	HIF1A.p2	AK053745|Uck2|80914|uridine-cytidine kinase 2	AK082837|Uck2|80914|uridine-cytidine kinase 2	AK155939|Uck2|80914|uridine-cytidine kinase 2	AK168318|Uck2|80914|uridine-cytidine kinase 2	AF236636|Uck2|80914|uridine-cytidine kinase 2	NM_030724|Uck2|80914|uridine-cytidine kinase 2
mm9_v1_chr4_-_118966945_118967127	1.15114	HIF1A.p2	X57621|Ybx1|22608|Y box protein 1	M62867|Ybx1|22608|Y box protein 1	U33196|Ybx1|22608|Y box protein 1	BC029747|Ybx1|22608|Y box protein 1	BC013620|Ybx1|22608|Y box protein 1	M60419|Ybx1|22608|Y box protein 1	BC061634|Ybx1|22608|Y box protein 1	BC031472|Ybx1|22608|Y box protein 1	BC049977|Ybx1|22608|Y box protein 1	BC013450|Ybx1|22608|Y box protein 1	AK011890|Ybx1|22608|Y box protein 1	AK150821|Ybx1|22608|Y box protein 1	NM_011732|Ybx1|22608|Y box protein 1
mm9_v1_chr2_-_3249825_3249918	1.14102	HIF1A.p2	AK139023|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)	AK049133|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)	BC051448|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)	AK087782|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)	NM_001013376|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)
mm9_v1_chr9_-_114690887_114691007	1.13679	HIF1A.p2	AK151785|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AF188504|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168280|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	NM_133978|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC038633|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK167886|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC026773|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168024|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AY241869|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK040123|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7
mm9_v1_chr4_+_15885062_15885148	1.13651	HIF1A.p2	AK132302|Nbn|27354|nibrin	AK134805|Nbn|27354|nibrin	AK134960|Nbn|27354|nibrin	AK159790|Nbn|27354|nibrin	BC013190|Nbn|27354|nibrin	NM_013752|Nbn|27354|nibrin	BC044773|Nbn|27354|nibrin	AF076687|Nbn|27354|nibrin	BC055061|Nbn|27354|nibrin	AK031933|Nbn|27354|nibrin	AF092840|Nbn|27354|nibrin	AK160614|Nbn|27354|nibrin
mm9_v1_chr1_+_9535477_9535591	1.13645	HIF1A.p2	AK142041|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	NM_021511|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	BC003481|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AB041589|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK122207|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	BC055925|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK017683|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK010178|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK019913|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK019257|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm9_v1_chr4_+_123582074_123582311	1.13527	HIF1A.p2	BC048478|Mycbp|56309|c-myc binding protein	AK033289|Mycbp|56309|c-myc binding protein	AK077633|Mycbp|56309|c-myc binding protein	AK037661|Mycbp|56309|c-myc binding protein	AK077762|Mycbp|56309|c-myc binding protein	AK077995|Mycbp|56309|c-myc binding protein	AK145773|Mycbp|56309|c-myc binding protein	NM_019660|Mycbp|56309|c-myc binding protein	BC028344|Mycbp|56309|c-myc binding protein	AB015858|Mycbp|56309|c-myc binding protein
mm9_v1_chr9_-_58160063_58160199	1.13211	HIF1A.p2	BC003973|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr6_+_117857771_117857856	1.13064	HIF1A.p2	NM_001166428|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	NM_001166429|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr19_-_31839462_31839522	1.12882	HIF1A.p2	AK051624|Prkg1|19091|protein kinase, cGMP-dependent, type I	AK083991|Prkg1|19091|protein kinase, cGMP-dependent, type I	NM_001013833|Prkg1|19091|protein kinase, cGMP-dependent, type I
mm9_v1_chr6_-_6167086_6167104	1.1218	HIF1A.p2	AK029020|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr2_+_25036524_25036678	1.12097	HIF1A.p2	BC069891|Nrarp|67122|Notch-regulated ankyrin repeat protein	AK012426|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chrX_-_138825032_138825081	1.11937	HIF1A.p2	AK054387|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_001033600|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_019477|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_207625|Acsl4|50790|acyl-CoA synthetase long-chain family member 4
mm9_v1_chr4_-_142802606_142802625	1.11709	HIF1A.p2	AK087820|Prdm2|110593|PR domain containing 2, with ZNF domain	NM_001081355|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr14_-_21000972_21001030	1.11667	HIF1A.p2	BC051088|Kcnk5|16529|potassium channel, subfamily K, member 5	BC058164|Kcnk5|16529|potassium channel, subfamily K, member 5	AK085330|Kcnk5|16529|potassium channel, subfamily K, member 5	AK172608|Kcnk5|16529|potassium channel, subfamily K, member 5	NM_021542|Kcnk5|16529|potassium channel, subfamily K, member 5	BC034012|Kcnk5|16529|potassium channel, subfamily K, member 5	AK132172|Kcnk5|16529|potassium channel, subfamily K, member 5
mm9_v1_chr11_-_57982024_57982049	1.11211	HIF1A.p2	NM_001166669|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166670|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166671|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_172558|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr4_-_141279303_141279379	1.11005	HIF1A.p2	BC021415|Ddi2|68817|DNA-damage inducible protein 2	AK129015|Ddi2|68817|DNA-damage inducible protein 2	NM_001017966|Ddi2|68817|DNA-damage inducible protein 2
mm9_v1_chr5_+_115879617_115879707	1.10872	HIF1A.p2	D49654|Msi1|17690|Musashi homolog 1(Drosophila)	NM_008629|Msi1|17690|Musashi homolog 1(Drosophila)	AK084019|Msi1|17690|Musashi homolog 1(Drosophila)
mm9_v1_chr17_+_66472859_66472952	1.10791	HIF1A.p2	BC079656|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	NM_001003919|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK076357|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK049419|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK152868|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)
mm9_v1_chr3_-_75760843_75760893	1.10632	HIF1A.p2	AK080456|Golim4|73124|golgi integral membrane protein 4	AK033730|Golim4|73124|golgi integral membrane protein 4	AK048434|Golim4|73124|golgi integral membrane protein 4	AK078928|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr17_-_27270820_27270865	1.10326	HIF1A.p2	AK013521|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene	AK019014|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene	NM_026063|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene	BC030629|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene
mm9_v1_chr8_+_131209680_131209783	1.09701	HIF1A.p2	BC050906|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	AK159689|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	Y00769|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr1_+_122498985_122498994	1.09662	HIF1A.p2	AK140634|En1|13798|engrailed 1
mm9_v1_chr4_-_106926041_106926144	1.0937	HIF1A.p2	BC031894|Lrrc42|77809|leucine rich repeat containing 42	BC027203|Lrrc42|77809|leucine rich repeat containing 42	NM_029985|Lrrc42|77809|leucine rich repeat containing 42
mm9_v1_chr19_-_24248477_24248629	1.09361	HIF1A.p2	AF113005|Tjp2|21873|tight junction protein 2	BC042695|Tjp2|21873|tight junction protein 2	BC034677|Tjp2|21873|tight junction protein 2	BC039924|Tjp2|21873|tight junction protein 2	NM_001198985|Tjp2|21873|tight junction protein 2
mm9_v1_chr3_-_119486136_119486235	1.09148	HIF1A.p2	AK207246|Ptbp2|56195|polypyrimidine tract binding protein 2	AF095718|Ptbp2|56195|polypyrimidine tract binding protein 2	BC010255|Ptbp2|56195|polypyrimidine tract binding protein 2	AK137348|Ptbp2|56195|polypyrimidine tract binding protein 2	AK050624|Ptbp2|56195|polypyrimidine tract binding protein 2	AK050650|Ptbp2|56195|polypyrimidine tract binding protein 2	AK041655|Ptbp2|56195|polypyrimidine tract binding protein 2	AK015056|Ptbp2|56195|polypyrimidine tract binding protein 2
mm9_v1_chr9_+_36640268_36640432	1.08908	HIF1A.p2	AK138656|Fez1|235180|fasciculation and elongation protein zeta 1 (zygin I)	BC029629|Fez1|235180|fasciculation and elongation protein zeta 1 (zygin I)
mm9_v1_chr8_-_72498210_72498309	1.08599	HIF1A.p2	NM_001113346|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr19_+_6057884_6057982	1.08452	HIF1A.p2	NM_001160239|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	NM_007990|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK132752|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK002355|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK151211|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK151465|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK152738|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK168348|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	D26610|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK146359|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	BC062873|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	X65922|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	NM_001190436|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	BC058691|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	BC081463|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
mm9_v1_chr4_+_151699954_151699986	1.08356	HIF1A.p2	BC007139|Rpl22|19934|ribosomal protein L22	AK003022|Rpl22|19934|ribosomal protein L22	AK169731|Rpl22|19934|ribosomal protein L22	AK009094|Rpl22|19934|ribosomal protein L22	D17653|Rpl22|19934|ribosomal protein L22	AK168353|Rpl22|19934|ribosomal protein L22	AK169078|Rpl22|19934|ribosomal protein L22	BC021344|Rpl22|19934|ribosomal protein L22	NM_009079|Rpl22|19934|ribosomal protein L22
mm9_v1_chr3_+_106350764_106350811	1.08307	HIF1A.p2	AK009940|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK052824|Dram2|67171|VDNA-damage regulated autophagy modulator 2	BC024458|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK008532|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK012044|Dram2|67171|VDNA-damage regulated autophagy modulator 2
mm9_v1_chr11_+_74462965_74463046	1.07743	HIF1A.p2	AK145708|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK157310|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154925|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	NM_001081158|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154146|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK036540|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK150045|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	BC072573|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene
mm9_v1_chr3_+_87734217_87734248	1.07695	HIF1A.p2	AK053778|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	AK155979|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	AK160738|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	NM_177663|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	BC098326|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2
mm9_v1_chr8_+_131209614_131209661	1.07442	HIF1A.p2	AK088016|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	AK135521|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	AK167682|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr1_+_141351340_141351508	1.07044	HIF1A.p2	AK052326|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	NM_009791|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK050785|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AF533752|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK083710|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK079744|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK052515|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AY971958|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)
mm9_v1_chr15_-_85412250_85412299	1.06824	HIF1A.p2	BC058398|Wnt7b|22422|wingless-related MMTV integration site 7B	NM_009528|Wnt7b|22422|wingless-related MMTV integration site 7B
mm9_v1_chr9_-_86358490_86358538	1.0681	HIF1A.p2	BC115687|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein	BC115686|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein	AK049229|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein	NM_027394|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein	AK011446|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein
mm9_v1_chr5_+_45884612_45884734	1.06779	HIF1A.p2	BC016536|Lap3|66988|leucine aminopeptidase 3	NM_024434|Lap3|66988|leucine aminopeptidase 3	AK089023|Lap3|66988|leucine aminopeptidase 3	AF334160|Lap3|66988|leucine aminopeptidase 3	AK010502|Lap3|66988|leucine aminopeptidase 3	AK002819|Lap3|66988|leucine aminopeptidase 3	CT010237|Lap3|66988|leucine aminopeptidase 3	CT010301|Lap3|66988|leucine aminopeptidase 3	AK005334|Lap3|66988|leucine aminopeptidase 3	AK010384|Lap3|66988|leucine aminopeptidase 3	AK011604|Lap3|66988|leucine aminopeptidase 3	AK169032|Lap3|66988|leucine aminopeptidase 3	AK008600|Lap3|66988|leucine aminopeptidase 3	AK166958|Lap3|66988|leucine aminopeptidase 3
mm9_v1_chr9_-_43047862_43047949	1.06659	HIF1A.p2	BC026022|Oaf|102644|OAF homolog (Drosophila)	BC034836|Oaf|102644|OAF homolog (Drosophila)	AK150279|Oaf|102644|OAF homolog (Drosophila)	BC025514|Oaf|102644|OAF homolog (Drosophila)	AK051349|Oaf|102644|OAF homolog (Drosophila)	NM_178644|Oaf|102644|OAF homolog (Drosophila)
mm9_v1_chr17_-_23810808_23810848	1.06307	HIF1A.p2	AK089746|Thoc6|386612|THO complex 6 homolog (Drosophila)	BC089551|Thoc6|386612|THO complex 6 homolog (Drosophila)
mm9_v1_chrX_-_162948399_162948409	1.06293	HIF1A.p2	AK140929|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	BC067008|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	NM_001007577|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing
mm9_v1_chr3_-_138738152_138738164	1.06285	HIF1A.p2	AK158465|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	NM_001040690|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	NM_145544|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK172052|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1
mm9_v1_chr4_+_153544821_153544830	1.06127	HIF1A.p2	NM_001162977|Megf6|230971|multiple EGF-like-domains 6
mm9_v1_chr15_+_102162136_102162200	1.05669	HIF1A.p2	NM_021713|Myg1|60315|melanocyte proliferating gene 1	AF289484|Myg1|60315|melanocyte proliferating gene 1	BC028501|Myg1|60315|melanocyte proliferating gene 1	AK017955|Myg1|60315|melanocyte proliferating gene 1	AK002656|Myg1|60315|melanocyte proliferating gene 1	AK004104|Myg1|60315|melanocyte proliferating gene 1	BC023124|Myg1|60315|melanocyte proliferating gene 1	AK013232|Myg1|60315|melanocyte proliferating gene 1
mm9_v1_chr2_+_167906462_167906503	1.05176	HIF1A.p2	NM_021409|Pard6b|58220|par-6 (partitioning defective 6) homolog beta (C. elegans)
mm9_v1_chr8_+_11556062_11556065	1.04403	HIF1A.p2	AK145553|Ing1|26356|inhibitor of growth family, member 1	AK076482|Ing1|26356|inhibitor of growth family, member 1	AK141466|Ing1|26356|inhibitor of growth family, member 1	AF177757|Ing1|26356|inhibitor of growth family, member 1	NM_011919|Ing1|26356|inhibitor of growth family, member 1
mm9_v1_chr13_-_94269616_94269653	1.0439	HIF1A.p2	BC069906|Jmy|57748|junction-mediating and regulatory protein	BC090835|Jmy|57748|junction-mediating and regulatory protein	NM_021310|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr18_-_57134974_57135060	1.04263	HIF1A.p2	BC116244|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	BC116245|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	BC127172|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	AK021208|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	AK053997|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	AK140255|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene	NM_029909|C330018D20Rik|77422|RIKEN cDNA C330018D20 gene
mm9_v1_chr4_-_129277744_129277893	1.04219	HIF1A.p2	BC029625|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK002896|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AF271072|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK089340|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK012375|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK010781|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK172208|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK149955|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	NM_018799|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I
mm9_v1_chr13_-_38620307_38620383	1.03694	HIF1A.p2	AK224952|Txndc5|105245|thioredoxin domain containing 5	AK224967|Txndc5|105245|thioredoxin domain containing 5	AY243534|Txndc5|105245|thioredoxin domain containing 5	AK169680|Txndc5|105245|thioredoxin domain containing 5	AK224923|Txndc5|105245|thioredoxin domain containing 5	AK225005|Txndc5|105245|thioredoxin domain containing 5	AK225014|Txndc5|105245|thioredoxin domain containing 5	BC016252|Txndc5|105245|thioredoxin domain containing 5	AK224999|Txndc5|105245|thioredoxin domain containing 5	AK224976|Txndc5|105245|thioredoxin domain containing 5	AK224965|Txndc5|105245|thioredoxin domain containing 5	AK224966|Txndc5|105245|thioredoxin domain containing 5	AK224979|Txndc5|105245|thioredoxin domain containing 5	AK224988|Txndc5|105245|thioredoxin domain containing 5	AK224947|Txndc5|105245|thioredoxin domain containing 5	AK224924|Txndc5|105245|thioredoxin domain containing 5	NM_145367|Txndc5|105245|thioredoxin domain containing 5	AK224939|Txndc5|105245|thioredoxin domain containing 5	AK224991|Txndc5|105245|thioredoxin domain containing 5	AK224992|Txndc5|105245|thioredoxin domain containing 5	AK224993|Txndc5|105245|thioredoxin domain containing 5	AK150781|Txndc5|105245|thioredoxin domain containing 5	AK224978|Txndc5|105245|thioredoxin domain containing 5	AK224938|Txndc5|105245|thioredoxin domain containing 5	AK224945|Txndc5|105245|thioredoxin domain containing 5	AK224977|Txndc5|105245|thioredoxin domain containing 5	AK224983|Txndc5|105245|thioredoxin domain containing 5	AK224990|Txndc5|105245|thioredoxin domain containing 5	AK142049|Txndc5|105245|thioredoxin domain containing 5	AK224946|Txndc5|105245|thioredoxin domain containing 5	AK224913|Txndc5|105245|thioredoxin domain containing 5	AK224972|Txndc5|105245|thioredoxin domain containing 5	AK224937|Txndc5|105245|thioredoxin domain containing 5	AK224989|Txndc5|105245|thioredoxin domain containing 5	AK224994|Txndc5|105245|thioredoxin domain containing 5	AK225004|Txndc5|105245|thioredoxin domain containing 5	AK225007|Txndc5|105245|thioredoxin domain containing 5	AK225010|Txndc5|105245|thioredoxin domain containing 5	AK225011|Txndc5|105245|thioredoxin domain containing 5	AK224934|Txndc5|105245|thioredoxin domain containing 5	AK224936|Txndc5|105245|thioredoxin domain containing 5	AK224951|Txndc5|105245|thioredoxin domain containing 5	AK224960|Txndc5|105245|thioredoxin domain containing 5	AK224982|Txndc5|105245|thioredoxin domain containing 5	AK225001|Txndc5|105245|thioredoxin domain containing 5	AK224927|Txndc5|105245|thioredoxin domain containing 5	AK224963|Txndc5|105245|thioredoxin domain containing 5	AK224964|Txndc5|105245|thioredoxin domain containing 5	AK224971|Txndc5|105245|thioredoxin domain containing 5	AK224986|Txndc5|105245|thioredoxin domain containing 5	AK225023|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chrX_-_106208659_106208718	1.03252	HIF1A.p2	BC021626|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AB018374|Hmgn5|50887|high-mobility group nucleosome binding domain 5	BC083087|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AK131996|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AK146755|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AF213454|Hmgn5|50887|high-mobility group nucleosome binding domain 5	NM_016710|Hmgn5|50887|high-mobility group nucleosome binding domain 5
mm9_v1_chr3_+_135101314_135101542	1.03152	HIF1A.p2	AK151295|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153100|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK077666|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153423|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159125|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chrX_+_97821403_97821491	1.03038	HIF1A.p2	NM_008446|Kif4|16571|kinesin family member 4	AK084837|Kif4|16571|kinesin family member 4	AK135179|Kif4|16571|kinesin family member 4	BC050946|Kif4|16571|kinesin family member 4	BC054537|Kif4|16571|kinesin family member 4	AK171938|Kif4|16571|kinesin family member 4
mm9_v1_chr5_-_89104575_89104676	1.02591	HIF1A.p2	AK168385|Grsf1|231413|G-rich RNA sequence binding factor 1	AK168459|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_001098476|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr15_-_81702298_81702350	1.02424	HIF1A.p2	AK163247|Phf5a|68479|PHD finger protein 5A	AK143590|Phf5a|68479|PHD finger protein 5A	NM_026737|Phf5a|68479|PHD finger protein 5A	AK167955|Phf5a|68479|PHD finger protein 5A	BC025161|Phf5a|68479|PHD finger protein 5A	AK003520|Phf5a|68479|PHD finger protein 5A	AF479288|Phf5a|68479|PHD finger protein 5A	AK167932|Phf5a|68479|PHD finger protein 5A
mm9_v1_chr5_+_64484146_64484264	1.02321	HIF1A.p2	BC052762|Pgm1|66681|phosphoglucomutase 1	NM_025700|Pgm1|66681|phosphoglucomutase 1	BC030869|Pgm1|66681|phosphoglucomutase 1	AK014332|Pgm1|66681|phosphoglucomutase 1
mm9_v1_chr7_-_17199935_17200012	1.02249	HIF1A.p2	AK161796|Grlf1|232906|glucocorticoid receptor DNA binding factor 1
mm9_v1_chr4_-_129318200_129318260	1.02246	HIF1A.p2	AK141252|Txlna|109658|taxilin alpha
mm9_v1_chr7_+_128177958_128178339	1.01897	HIF1A.p2	AJ278576|Mettl9|59052|methyltransferase like 9	NM_021554|Mettl9|59052|methyltransferase like 9	BC068124|Mettl9|59052|methyltransferase like 9	AB041664|Mettl9|59052|methyltransferase like 9	AK075586|Mettl9|59052|methyltransferase like 9
mm9_v1_chr17_-_53828547_53828590	1.01891	HIF1A.p2	AB193067|Sgol1|72415|shugoshin-like 1 (S. pombe)	AB193068|Sgol1|72415|shugoshin-like 1 (S. pombe)	AK196456|Sgol1|72415|shugoshin-like 1 (S. pombe)
mm9_v1_chr17_+_35035898_35035925	1.01802	HIF1A.p2	AK154246|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	AB077210|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	NM_145830|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2
mm9_v1_chr13_+_91062722_91062758	1.01666	HIF1A.p2	NM_024175|Rps23|66475|ribosomal protein S23	AK166994|Rps23|66475|ribosomal protein S23	AK010667|Rps23|66475|ribosomal protein S23
mm9_v1_chr10_+_121176978_121177017	1.01419	HIF1A.p2	BC065058|BC048403|270802|cDNA sequence BC048403	NM_173022|BC048403|270802|cDNA sequence BC048403	AK166238|BC048403|270802|cDNA sequence BC048403	AK138662|BC048403|270802|cDNA sequence BC048403	AK162911|BC048403|270802|cDNA sequence BC048403	AK087110|BC048403|270802|cDNA sequence BC048403	AK169891|BC048403|270802|cDNA sequence BC048403
mm9_v1_chr2_-_120966376_120966433	1.01322	HIF1A.p2	BC071272|Lcmt2|329504|leucine carboxyl methyltransferase 2	AK172970|Lcmt2|329504|leucine carboxyl methyltransferase 2	AK084642|Lcmt2|329504|leucine carboxyl methyltransferase 2	NM_177846|Lcmt2|329504|leucine carboxyl methyltransferase 2
mm9_v1_chr13_-_38620109_38620303	1.00999	HIF1A.p2	AK225012|Txndc5|105245|thioredoxin domain containing 5	AK225013|Txndc5|105245|thioredoxin domain containing 5	AK225015|Txndc5|105245|thioredoxin domain containing 5	AK225022|Txndc5|105245|thioredoxin domain containing 5	AK225016|Txndc5|105245|thioredoxin domain containing 5	BC024505|Txndc5|105245|thioredoxin domain containing 5	AY548112|Txndc5|105245|thioredoxin domain containing 5	BC046789|Txndc5|105245|thioredoxin domain containing 5	AK225020|Txndc5|105245|thioredoxin domain containing 5	AK225021|Txndc5|105245|thioredoxin domain containing 5	AK224933|Txndc5|105245|thioredoxin domain containing 5	AK224949|Txndc5|105245|thioredoxin domain containing 5	AK224950|Txndc5|105245|thioredoxin domain containing 5	AK224970|Txndc5|105245|thioredoxin domain containing 5	AK224973|Txndc5|105245|thioredoxin domain containing 5	AK224987|Txndc5|105245|thioredoxin domain containing 5	AK224974|Txndc5|105245|thioredoxin domain containing 5	AK224922|Txndc5|105245|thioredoxin domain containing 5	AK224926|Txndc5|105245|thioredoxin domain containing 5	AK224984|Txndc5|105245|thioredoxin domain containing 5	AK224930|Txndc5|105245|thioredoxin domain containing 5	AK224943|Txndc5|105245|thioredoxin domain containing 5	AK224948|Txndc5|105245|thioredoxin domain containing 5	AK224997|Txndc5|105245|thioredoxin domain containing 5	AK224998|Txndc5|105245|thioredoxin domain containing 5	AK224985|Txndc5|105245|thioredoxin domain containing 5	AK224995|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr10_-_79862025_79862166	1.00969	HIF1A.p2	BC038264|Mbd3|17192|methyl-CpG binding domain protein 3
mm9_v1_chr4_+_118293403_118293498	1.00689	HIF1A.p2	NM_026932|Ebna1bp2|69072|EBNA1 binding protein 2	BC054723|Ebna1bp2|69072|EBNA1 binding protein 2	AK007491|Ebna1bp2|69072|EBNA1 binding protein 2	AK134732|Ebna1bp2|69072|EBNA1 binding protein 2	AK167070|Ebna1bp2|69072|EBNA1 binding protein 2	BC062876|Ebna1bp2|69072|EBNA1 binding protein 2	AK168269|Ebna1bp2|69072|EBNA1 binding protein 2
mm9_v1_chr11_+_68505416_68505481	1.00523	HIF1A.p2	NM_175260|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr7_-_129210524_129210583	1.00115	HIF1A.p2	AK129469|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK014324|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK076043|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK169225|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	AK167506|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	BC025907|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)	NM_026140|Ears2|67417|glutamyl-tRNA synthetase 2 (mitochondrial)(putative)
mm9_v1_chr8_+_122434697_122434814	0.999894	HIF1A.p2	AK077453|Usp10|22224|ubiquitin specific peptidase 10	AK157970|Usp10|22224|ubiquitin specific peptidase 10	AK165156|Usp10|22224|ubiquitin specific peptidase 10	AK172443|Usp10|22224|ubiquitin specific peptidase 10	AK137015|Usp10|22224|ubiquitin specific peptidase 10	AK166243|Usp10|22224|ubiquitin specific peptidase 10	AK129083|Usp10|22224|ubiquitin specific peptidase 10	BC007134|Usp10|22224|ubiquitin specific peptidase 10	D84096|Usp10|22224|ubiquitin specific peptidase 10	NM_009462|Usp10|22224|ubiquitin specific peptidase 10	AK179830|Usp10|22224|ubiquitin specific peptidase 10
mm9_v1_chr1_-_91827726_91827753	0.992124	HIF1A.p2	L39770|Gbx2|14472|gastrulation brain homeobox 2	NM_010262|Gbx2|14472|gastrulation brain homeobox 2	Z48800|Gbx2|14472|gastrulation brain homeobox 2	BC050989|Gbx2|14472|gastrulation brain homeobox 2
mm9_v1_chr10_-_12912880_12912990	0.989895	HIF1A.p2	AK011491|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC069962|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC067062|Ltv1|353258|LTV1 homolog (S. cerevisiae)	NM_181470|Ltv1|353258|LTV1 homolog (S. cerevisiae)
mm9_v1_chr8_+_97876182_97876236	0.98529	HIF1A.p2	BC047278|Mmp15|17388|matrix metallopeptidase 15	NM_008609|Mmp15|17388|matrix metallopeptidase 15
mm9_v1_chr19_+_45080961_45081073	0.985269	HIF1A.p2	BC071195|Peo1|226153|progressive external ophthalmoplegia 1 (human)	NM_153796|Peo1|226153|progressive external ophthalmoplegia 1 (human)
mm9_v1_chr14_-_51544484_51544489	0.982669	HIF1A.p2	BC091757|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr7_+_109118687_109118697	0.98168	HIF1A.p2	AK032693|Numa1|101706|nuclear mitotic apparatus protein 1
mm9_v1_chr4_+_129497408_129497532	0.981348	HIF1A.p2	AK155895|Ptp4a2|19244|protein tyrosine phosphatase 4a2	BC087551|Ptp4a2|19244|protein tyrosine phosphatase 4a2
mm9_v1_chr8_+_3631116_3631169	0.979912	HIF1A.p2	AK088364|Stxbp2|20911|syntaxin binding protein 2	BC008102|Stxbp2|20911|syntaxin binding protein 2	U19520|Stxbp2|20911|syntaxin binding protein 2	AF263345|Stxbp2|20911|syntaxin binding protein 2	AK133419|Stxbp2|20911|syntaxin binding protein 2	NM_011503|Stxbp2|20911|syntaxin binding protein 2	D42068|Stxbp2|20911|syntaxin binding protein 2	BC003477|Stxbp2|20911|syntaxin binding protein 2
mm9_v1_chr9_+_106105422_106105590	0.979198	HIF1A.p2	AK084026|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_011876|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK155204|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK166900|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC003338|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK170441|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK157886|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	Y17808|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AY267189|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)
mm9_v1_chr7_-_134655863_134655912	0.979097	HIF1A.p2	BC049754|1700008J07Rik|629159|RIKEN cDNA 1700008J07 gene	AK131716|1700008J07Rik|629159|RIKEN cDNA 1700008J07 gene	AK005774|1700008J07Rik|629159|RIKEN cDNA 1700008J07 gene
mm9_v1_chr7_+_30074296_30074361	0.97206	HIF1A.p2	AF352573|Ppp1r14a|68458|protein phosphatase 1, regulatory (inhibitor) subunit 14A	BC010832|Ppp1r14a|68458|protein phosphatase 1, regulatory (inhibitor) subunit 14A	NM_026731|Ppp1r14a|68458|protein phosphatase 1, regulatory (inhibitor) subunit 14A	AY050672|Ppp1r14a|68458|protein phosphatase 1, regulatory (inhibitor) subunit 14A	AK003249|Ppp1r14a|68458|protein phosphatase 1, regulatory (inhibitor) subunit 14A
mm9_v1_chr7_-_97129067_97129083	0.971748	HIF1A.p2	AK077664|Eed|13626|embryonic ectoderm development
mm9_v1_chr8_-_8661238_8661245	0.970765	HIF1A.p2	AK132512|Efnb2|13642|ephrin B2	AK134108|Efnb2|13642|ephrin B2	AK143059|Efnb2|13642|ephrin B2	AK142203|Efnb2|13642|ephrin B2	AK142283|Efnb2|13642|ephrin B2
mm9_v1_chr6_-_38249209_38249350	0.964276	HIF1A.p2	AK084475|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK045287|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK051064|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	NM_172467|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138180|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138181|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr2_+_75497282_75497379	0.960722	HIF1A.p2	NM_053263|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	NM_146130|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	NM_198090|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AK133860|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AK010481|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC038364|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AK169663|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AB201711|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC057655|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC062198|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AF463524|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC116250|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC116251|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC157904|Gm6793|627828|heterogeneous nuclear ribonucleoprotein A3 pseudogene	BC157919|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC158038|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC158074|Gm6793|627828|heterogeneous nuclear ribonucleoprotein A3 pseudogene	BC172011|Gm6793|627828|heterogeneous nuclear ribonucleoprotein A3 pseudogene	BC023908|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC064824|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3
mm9_v1_chr10_+_79317316_79317391	0.960366	HIF1A.p2	AK151292|Ptbp1|19205|polypyrimidine tract binding protein 1	AK153561|Ptbp1|19205|polypyrimidine tract binding protein 1	NM_001077363|Ptbp1|19205|polypyrimidine tract binding protein 1	NM_008956|Ptbp1|19205|polypyrimidine tract binding protein 1	AK163274|Ptbp1|19205|polypyrimidine tract binding protein 1	BC007472|Ptbp1|19205|polypyrimidine tract binding protein 1	AK082600|Ptbp1|19205|polypyrimidine tract binding protein 1	AK150840|Ptbp1|19205|polypyrimidine tract binding protein 1	AK168392|Ptbp1|19205|polypyrimidine tract binding protein 1	AK037607|Ptbp1|19205|polypyrimidine tract binding protein 1	AK172712|Ptbp1|19205|polypyrimidine tract binding protein 1	AK044956|Ptbp1|19205|polypyrimidine tract binding protein 1	AK043824|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr10_-_33926990_33927064	0.955497	HIF1A.p2	AK153326|Dse|212898|dermatan sulfate epimerase	AK031737|Dse|212898|dermatan sulfate epimerase
mm9_v1_chr2_+_84679564_84679595	0.955314	HIF1A.p2	NM_001081349|Slc43a1|72401|solute carrier family 43, member 1	AK011417|Slc43a1|72401|solute carrier family 43, member 1	AK046758|Slc43a1|72401|solute carrier family 43, member 1	AK165374|Slc43a1|72401|solute carrier family 43, member 1	AB103034|Slc43a1|72401|solute carrier family 43, member 1
mm9_v1_chr8_+_32297803_32297858	0.954529	HIF1A.p2	BC062113|Fut10|171167|fucosyltransferase 10	NM_134161|Fut10|171167|fucosyltransferase 10	BC030474|Fut10|171167|fucosyltransferase 10	AK083041|Fut10|171167|fucosyltransferase 10	AK147136|Fut10|171167|fucosyltransferase 10	NM_001012517|Fut10|171167|fucosyltransferase 10	AK169153|Fut10|171167|fucosyltransferase 10
mm9_v1_chr14_+_56364564_56364843	0.953585	HIF1A.p2	AK146020|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK139689|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK083861|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK015585|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK219900|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene
mm9_v1_chr3_+_14886681_14886724	0.94437	HIF1A.p2	AK146015|Car2|12349|carbonic anhydrase 2	AK002333|Car2|12349|carbonic anhydrase 2	BC044806|Car2|12349|carbonic anhydrase 2	BC055291|Car2|12349|carbonic anhydrase 2	K00811|Car2|12349|carbonic anhydrase 2
mm9_v1_chr8_-_8661060_8661191	0.942376	HIF1A.p2	BC057009|Efnb2|13642|ephrin B2	AK132845|Efnb2|13642|ephrin B2
mm9_v1_chr5_-_138227888_138227970	0.94187	HIF1A.p2	AK154415|Mepce|231803|methylphosphate capping enzyme	NM_144913|Mepce|231803|methylphosphate capping enzyme
mm9_v1_chr14_-_31942057_31942124	0.939623	HIF1A.p2	AK036279|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene	AK008341|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene	AK019298|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene	AK007443|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene
mm9_v1_chr6_-_116578909_116578956	0.93696	HIF1A.p2	AF281634|Zfp422|67255|zinc finger protein 422
mm9_v1_chr14_+_31528352_31528352	0.929005	HIF1A.p2	AK160573|Sfmbt1|54650|Scm-like with four mbt domains 1	NM_001166531|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr19_-_8955326_8955347	0.926879	HIF1A.p2	BC029863|AI462493|107197|expressed sequence AI462493
mm9_v1_chr7_-_97129450_97129518	0.925216	HIF1A.p2	BC012966|Eed|13626|embryonic ectoderm development	U78103|Eed|13626|embryonic ectoderm development	NM_021876|Eed|13626|embryonic ectoderm development	U97675|Eed|13626|embryonic ectoderm development
mm9_v1_chr5_+_111082466_111082502	0.924417	HIF1A.p2	NM_027156|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	AK141361|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	BC060646|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	AK152599|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
mm9_v1_chr11_+_3190781_3190835	0.920603	HIF1A.p2	AK217423|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr13_-_78338131_78338242	0.91965	HIF1A.p2	BC108408|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	X74134|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	NM_010151|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1
mm9_v1_chr4_+_118100682_118100801	0.919439	HIF1A.p2	NM_001039175|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	NM_019422|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK156003|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK171217|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK135348|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	BC096673|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK003743|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
mm9_v1_chr2_-_114480618_114480699	0.91705	HIF1A.p2	AK006965|Atpbd4|66632|ATP binding domain 4	AK017595|Atpbd4|66632|ATP binding domain 4	AK145789|Atpbd4|66632|ATP binding domain 4	AK033888|Atpbd4|66632|ATP binding domain 4	AK088160|Atpbd4|66632|ATP binding domain 4	NM_025675|Atpbd4|66632|ATP binding domain 4	AK007021|Atpbd4|66632|ATP binding domain 4	BC022995|Atpbd4|66632|ATP binding domain 4	AK036021|Atpbd4|66632|ATP binding domain 4	AK082013|Atpbd4|66632|ATP binding domain 4
mm9_v1_chr8_+_34842513_34842603	0.916577	HIF1A.p2	AK088342|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	NM_026584|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	AK146803|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	BC020016|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	AK021183|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr17_-_33822327_33822413	0.913907	HIF1A.p2	BC035525|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK159848|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	BC017539|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	BC065172|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK168347|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK133911|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK166670|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK169101|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK171892|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK145343|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK011521|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK051976|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK220299|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	NM_001109913|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	NM_029804|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M
mm9_v1_chr3_-_138152336_138152369	0.913481	HIF1A.p2	BC096469|Metap1|75624|methionyl aminopeptidase 1	AK077694|Metap1|75624|methionyl aminopeptidase 1	NM_175224|Metap1|75624|methionyl aminopeptidase 1	AK153944|Metap1|75624|methionyl aminopeptidase 1	AK165034|Metap1|75624|methionyl aminopeptidase 1	AK152138|Metap1|75624|methionyl aminopeptidase 1	AK153231|Metap1|75624|methionyl aminopeptidase 1
mm9_v1_chr12_+_77471506_77471590	0.91334	HIF1A.p2	AK029762|Zbtb1|268564|zinc finger and BTB domain containing 1	AK131985|Zbtb1|268564|zinc finger and BTB domain containing 1	BC012239|Zbtb1|268564|zinc finger and BTB domain containing 1
mm9_v1_chr7_-_31741821_31741928	0.911109	HIF1A.p2	BC082995|Usf2|22282|upstream transcription factor 2	NM_011680|Usf2|22282|upstream transcription factor 2
mm9_v1_chr18_-_3337505_3337586	0.910069	HIF1A.p2	AK009841|Crem|12916|cAMP responsive element modulator	AK161366|Crem|12916|cAMP responsive element modulator	AK010806|Crem|12916|cAMP responsive element modulator	NM_001110850|Crem|12916|cAMP responsive element modulator	NM_001110851|Crem|12916|cAMP responsive element modulator	NM_001110852|Crem|12916|cAMP responsive element modulator	NM_001110856|Crem|12916|cAMP responsive element modulator	NM_001110857|Crem|12916|cAMP responsive element modulator	NM_001110858|Crem|12916|cAMP responsive element modulator	NM_001110859|Crem|12916|cAMP responsive element modulator	NM_013498|Crem|12916|cAMP responsive element modulator
mm9_v1_chr11_-_93747039_93747079	0.90887	HIF1A.p2	BC119621|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	BC119622|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	AK167248|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	NM_001013375|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr3_-_8923789_8923856	0.904167	HIF1A.p2	AK088314|Mrps28|66230|mitochondrial ribosomal protein S28	AK011036|Mrps28|66230|mitochondrial ribosomal protein S28	BC028530|Mrps28|66230|mitochondrial ribosomal protein S28	AK005229|Mrps28|66230|mitochondrial ribosomal protein S28	NM_025434|Mrps28|66230|mitochondrial ribosomal protein S28
mm9_v1_chr5_+_93522440_93522507	0.904106	HIF1A.p2	AK166517|Sept11|52398|septin 11	AK171368|Sept11|52398|septin 11	BC064466|Sept11|52398|septin 11	NM_001009818|Sept11|52398|septin 11
mm9_v1_chr1_-_172105009_172105087	0.903569	HIF1A.p2	BC016406|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK036243|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK147139|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK081690|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK049519|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	NM_133806|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK047566|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1
mm9_v1_chr3_-_106350628_106350700	0.901907	HIF1A.p2	BC021753|Cept1|99712|choline/ethanolaminephosphotransferase 1	BC023783|Cept1|99712|choline/ethanolaminephosphotransferase 1	AK037116|Cept1|99712|choline/ethanolaminephosphotransferase 1	NM_133869|Cept1|99712|choline/ethanolaminephosphotransferase 1
mm9_v1_chr8_-_87956606_87956658	0.900134	HIF1A.p2	AK007050|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK013123|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	BC040087|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene
mm9_v1_chr11_-_86621074_86621127	0.897489	HIF1A.p2	BC058276|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK135592|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK031000|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK004610|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr3_+_41368801_41368825	0.896736	HIF1A.p2	NM_001130186|Phf17|269424|PHD finger protein 17
mm9_v1_chr14_-_73725546_73725555	0.896615	HIF1A.p2	M26391|Rb1|19645|retinoblastoma 1
mm9_v1_chr10_-_121063321_121063512	0.895595	HIF1A.p2	NM_001081056|Xpot|73192|exportin, tRNA (nuclear export receptor for tRNAs)
mm9_v1_chr2_-_68310324_68310350	0.894296	HIF1A.p2	BC051964|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)
mm9_v1_chr9_-_63605745_63605800	0.893789	HIF1A.p2	AK048626|Smad3|17127|MAD homolog 3 (Drosophila)	NM_016769|Smad3|17127|MAD homolog 3 (Drosophila)
mm9_v1_chr18_+_67934517_67934670	0.891304	HIF1A.p2	AK143727|Seh1l|72124|SEH1-like (S. cerevisiae	NM_001039088|Seh1l|72124|SEH1-like (S. cerevisiae	NM_028112|Seh1l|72124|SEH1-like (S. cerevisiae	AK170591|Seh1l|72124|SEH1-like (S. cerevisiae	BC027244|Seh1l|72124|SEH1-like (S. cerevisiae	AK011330|Seh1l|72124|SEH1-like (S. cerevisiae	AK169231|Seh1l|72124|SEH1-like (S. cerevisiae	AK169388|Seh1l|72124|SEH1-like (S. cerevisiae	AK088835|Seh1l|72124|SEH1-like (S. cerevisiae	AK166573|Seh1l|72124|SEH1-like (S. cerevisiae
mm9_v1_chr9_+_70390523_70390626	0.890727	HIF1A.p2	AK077578|Sltm|66660|SAFB-like, transcription modulator	NM_026337|Sltm|66660|SAFB-like, transcription modulator	AK078251|Sltm|66660|SAFB-like, transcription modulator	AK011815|Sltm|66660|SAFB-like, transcription modulator
mm9_v1_chr2_+_83484743_83484852	0.889593	HIF1A.p2	BC058229|Zc3h15|69082|zinc finger CCCH-type containing 15	AK218793|Zc3h15|69082|zinc finger CCCH-type containing 15
mm9_v1_chr2_+_6243767_6243980	0.888414	HIF1A.p2	AK155073|Usp6nl|98910|USP6 N-terminal like	NM_001080548|Usp6nl|98910|USP6 N-terminal like	AK129037|Usp6nl|98910|USP6 N-terminal like	AK084045|Usp6nl|98910|USP6 N-terminal like
mm9_v1_chr17_-_13185324_13185414	0.88593	HIF1A.p2	AK076111|Wtap|60532|Wilms' tumour 1-associating protein	NM_175394|Wtap|60532|Wilms' tumour 1-associating protein	AK031965|Wtap|60532|Wilms' tumour 1-associating protein
mm9_v1_chr6_-_13557981_13558062	0.882867	HIF1A.p2	BC024911|Tmem168|101118|transmembrane protein 168	BC007160|Tmem168|101118|transmembrane protein 168	AK054353|Tmem168|101118|transmembrane protein 168	AK152957|Tmem168|101118|transmembrane protein 168	AK034589|Tmem168|101118|transmembrane protein 168	AK170302|Tmem168|101118|transmembrane protein 168	AK018471|Tmem168|101118|transmembrane protein 168	AK051532|Tmem168|101118|transmembrane protein 168	NM_028990|Tmem168|101118|transmembrane protein 168
mm9_v1_chr10_-_75322941_75323054	0.88212	HIF1A.p2	AK010691|Mif|17319|macrophage migration inhibitory factor	BC086928|Mif|17319|macrophage migration inhibitory factor	BC100605|Mif|17319|macrophage migration inhibitory factor	L02913|Mif|17319|macrophage migration inhibitory factor	AK152211|Mif|17319|macrophage migration inhibitory factor	BC024895|Mif|17319|macrophage migration inhibitory factor	L10613|Mif|17319|macrophage migration inhibitory factor	AK008939|Mif|17319|macrophage migration inhibitory factor	AK013328|Mif|17319|macrophage migration inhibitory factor	NM_010798|Mif|17319|macrophage migration inhibitory factor
mm9_v1_chrX_-_151772899_151773055	0.879945	HIF1A.p2	AK014651|Prdx4|53381|peroxiredoxin 4	AK029349|Prdx4|53381|peroxiredoxin 4	BC003349|Prdx4|53381|peroxiredoxin 4	AK005031|Prdx4|53381|peroxiredoxin 4	AK015920|Prdx4|53381|peroxiredoxin 4	AK152255|Prdx4|53381|peroxiredoxin 4	AK146402|Prdx4|53381|peroxiredoxin 4	NM_016764|Prdx4|53381|peroxiredoxin 4	U96746|Prdx4|53381|peroxiredoxin 4	BC019578|Prdx4|53381|peroxiredoxin 4	AK157829|Prdx4|53381|peroxiredoxin 4	AK165551|Prdx4|53381|peroxiredoxin 4
mm9_v1_chr18_+_32996878_32997001	0.877916	HIF1A.p2	AK156822|Wdr36|225348|WD repeat domain 36	NM_001110015|Wdr36|225348|WD repeat domain 36	NM_001110016|Wdr36|225348|WD repeat domain 36	NM_144863|Wdr36|225348|WD repeat domain 36	AK045396|Wdr36|225348|WD repeat domain 36	BC022132|Wdr36|225348|WD repeat domain 36	BC094453|Wdr36|225348|WD repeat domain 36	AK171683|Wdr36|225348|WD repeat domain 36	AK077545|Wdr36|225348|WD repeat domain 36	AK172377|Wdr36|225348|WD repeat domain 36	AK140019|Wdr36|225348|WD repeat domain 36	AK172054|Wdr36|225348|WD repeat domain 36	AK041763|Wdr36|225348|WD repeat domain 36	BC025809|Wdr36|225348|WD repeat domain 36	AK155965|Wdr36|225348|WD repeat domain 36
mm9_v1_chr13_-_104564553_104564699	0.876585	HIF1A.p2	AK039311|Srsf12|218543|serine/arginine-rich splicing factor 12	AK052265|Srsf12|218543|serine/arginine-rich splicing factor 12
mm9_v1_chr1_+_133807034_133807132	0.876465	HIF1A.p2	NM_001145804|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	NM_175294|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049825|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK078816|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	BC039951|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm9_v1_chr18_-_67800968_67801031	0.873173	HIF1A.p2	NM_001081073|Cep76|225659|centrosomal protein 76
mm9_v1_chr3_+_102862151_102862295	0.872866	HIF1A.p2	X13664|Nras|18176|neuroblastoma ras oncogene	NM_010937|Nras|18176|neuroblastoma ras oncogene	AK011704|Nras|18176|neuroblastoma ras oncogene	AK165960|Nras|18176|neuroblastoma ras oncogene	AK150357|Nras|18176|neuroblastoma ras oncogene	BC058755|Nras|18176|neuroblastoma ras oncogene	BC014704|Nras|18176|neuroblastoma ras oncogene	BC051443|Nras|18176|neuroblastoma ras oncogene
mm9_v1_chr5_+_38430461_38430564	0.87065	HIF1A.p2	AK007700|Stx18|71116|syntaxin 18	AK170165|Stx18|71116|syntaxin 18	NM_026959|Stx18|71116|syntaxin 18	BC021362|Stx18|71116|syntaxin 18	AK169273|Stx18|71116|syntaxin 18	AK016910|Stx18|71116|syntaxin 18
mm9_v1_chr11_-_75161767_75161884	0.869908	HIF1A.p2	AK177196|Rpa1|68275|replication protein A1	AK197958|Rpa1|68275|replication protein A1	AK203654|Rpa1|68275|replication protein A1	AK167598|Rpa1|68275|replication protein A1	AK150785|Rpa1|68275|replication protein A1	AK165316|Rpa1|68275|replication protein A1	BC019119|Rpa1|68275|replication protein A1	AK035084|Rpa1|68275|replication protein A1	AK152296|Rpa1|68275|replication protein A1	AK153107|Rpa1|68275|replication protein A1	AK165944|Rpa1|68275|replication protein A1	AK169599|Rpa1|68275|replication protein A1	AK148035|Rpa1|68275|replication protein A1	AK168400|Rpa1|68275|replication protein A1	AK151590|Rpa1|68275|replication protein A1	AK153144|Rpa1|68275|replication protein A1	NM_001164223|Rpa1|68275|replication protein A1	NM_026653|Rpa1|68275|replication protein A1
mm9_v1_chr1_+_4797868_4798011	0.86856	HIF1A.p2	AK016021|Lypla1|18777|lysophospholipase 1	BC052848|Lypla1|18777|lysophospholipase 1	AK167231|Lypla1|18777|lysophospholipase 1	AK146874|Lypla1|18777|lysophospholipase 1	AK002674|Lypla1|18777|lysophospholipase 1	BC013536|Lypla1|18777|lysophospholipase 1	NM_008866|Lypla1|18777|lysophospholipase 1	CT010201|Lypla1|18777|lysophospholipase 1	U89352|Lypla1|18777|lysophospholipase 1	AK050549|Lypla1|18777|lysophospholipase 1
mm9_v1_chr15_-_99705812_99705887	0.867892	HIF1A.p2	BC031490|Lima1|65970|LIM domain and actin binding 1	AK028311|Lima1|65970|LIM domain and actin binding 1	AK049350|Lima1|65970|LIM domain and actin binding 1	AF307845|Lima1|65970|LIM domain and actin binding 1	AK078959|Lima1|65970|LIM domain and actin binding 1	NM_001113545|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr3_-_89856250_89856452	0.867833	HIF1A.p2	AK030218|Ubap2l|74383|ubiquitin associated protein 2-like	AK031934|Ubap2l|74383|ubiquitin associated protein 2-like	BC023906|Ubap2l|74383|ubiquitin associated protein 2-like	BC029075|Ubap2l|74383|ubiquitin associated protein 2-like	AK088702|Ubap2l|74383|ubiquitin associated protein 2-like	AF276967|Ubap2l|74383|ubiquitin associated protein 2-like	AK048286|Ubap2l|74383|ubiquitin associated protein 2-like	AK079895|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165983|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165985|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165987|Ubap2l|74383|ubiquitin associated protein 2-like	NM_028475|Ubap2l|74383|ubiquitin associated protein 2-like	NM_153489|Ubap2l|74383|ubiquitin associated protein 2-like	AK014274|Ubap2l|74383|ubiquitin associated protein 2-like	AK152135|Ubap2l|74383|ubiquitin associated protein 2-like	AK040551|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165984|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165986|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165988|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr13_-_53381426_53381516	0.867101	HIF1A.p2	AK084752|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	AK031112|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	AK083538|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	BC070436|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	NM_013846|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	AK157705|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2
mm9_v1_chr9_+_21069727_21069776	0.866495	HIF1A.p2	AK154130|Atg4d|235040|autophagy-related 4D (yeast)	AK087258|Atg4d|235040|autophagy-related 4D (yeast)	AK036282|Atg4d|235040|autophagy-related 4D (yeast)	AK036571|Atg4d|235040|autophagy-related 4D (yeast)	AK081002|Atg4d|235040|autophagy-related 4D (yeast)	NM_153583|Atg4d|235040|autophagy-related 4D (yeast)	AK080353|Atg4d|235040|autophagy-related 4D (yeast)	AK044798|Atg4d|235040|autophagy-related 4D (yeast)	AK081605|Atg4d|235040|autophagy-related 4D (yeast)	BC030861|Atg4d|235040|autophagy-related 4D (yeast)	BC069851|Atg4d|235040|autophagy-related 4D (yeast)
mm9_v1_chr9_+_118415358_118415568	0.866248	HIF1A.p2	AK161568|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AK172292|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC037641|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AF051357|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC003268|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC096467|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	NM_018748|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC023102|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC057561|Golga4|54214|golgi autoantigen, golgin subfamily a, 4
mm9_v1_chr16_+_36071694_36071777	0.865966	HIF1A.p2	AK144564|Ccdc58|381045|coiled-coil domain containing 58	NM_001159421|Ccdc58|381045|coiled-coil domain containing 58	NM_198645|Ccdc58|381045|coiled-coil domain containing 58	BC024862|Ccdc58|381045|coiled-coil domain containing 58
mm9_v1_chr11_-_70796432_70796469	0.860941	HIF1A.p2	AK010601|C1qbp|12261|complement component 1, q subcomponent binding protein	AF300619|C1qbp|12261|complement component 1, q subcomponent binding protein	AJ001101|C1qbp|12261|complement component 1, q subcomponent binding protein
mm9_v1_chr18_+_67448839_67448957	0.860873	HIF1A.p2	AK154489|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AK170962|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AF353730|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	NM_053261|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AK171626|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AK154845|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	BC011093|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2
mm9_v1_chr2_-_22751051_22751075	0.860719	HIF1A.p2	AK079472|A130006I12Rik|319264|RIKEN cDNA A130006I12 gene
mm9_v1_chr8_+_120022149_120022210	0.857111	HIF1A.p2	AK142173|Plcg2|234779|phospholipase C, gamma 2	AK170430|Plcg2|234779|phospholipase C, gamma 2	BC023877|Plcg2|234779|phospholipase C, gamma 2	NM_172285|Plcg2|234779|phospholipase C, gamma 2	AK151039|Plcg2|234779|phospholipase C, gamma 2
mm9_v1_chr8_-_24348082_24348154	0.85379	HIF1A.p2	BC002156|Gins4|109145|GINS complex subunit 4 (Sld5 homolog)	AK076104|Gins4|109145|GINS complex subunit 4 (Sld5 homolog)	NM_024240|Gins4|109145|GINS complex subunit 4 (Sld5 homolog)
mm9_v1_chr6_-_52141697_52141712	0.853462	HIF1A.p2	AK076098|Hoxa4|15401|homeobox A4	BC107172|Hoxa4|15401|homeobox A4	NM_008265|Hoxa4|15401|homeobox A4
mm9_v1_chr1_+_138362933_138362977	0.849977	HIF1A.p2	AK087451|Kif14|381293|kinesin family member 14
mm9_v1_chr4_+_154937946_154937994	0.848548	HIF1A.p2	AK147917|Nadk|192185|NAD kinase
mm9_v1_chr14_-_62058627_62058783	0.848505	HIF1A.p2	AF020772|Kpna3|16648|karyopherin (importin) alpha 3	AK011559|Kpna3|16648|karyopherin (importin) alpha 3	AK049373|Kpna3|16648|karyopherin (importin) alpha 3	BC026885|Kpna3|16648|karyopherin (importin) alpha 3	AK161664|Kpna3|16648|karyopherin (importin) alpha 3	NM_008466|Kpna3|16648|karyopherin (importin) alpha 3
mm9_v1_chr12_-_86113948_86114061	0.847073	HIF1A.p2	AK158624|Npc2|67963|Niemann Pick type C2	NM_023409|Npc2|67963|Niemann Pick type C2
mm9_v1_chr5_-_135727086_135727099	0.843796	HIF1A.p2	AK021164|Fzd9|14371|frizzled homolog 9 (Drosophila)
mm9_v1_chr10_+_21878374_21878474	0.843115	HIF1A.p2	AK131854|Raet1e|379043|retinoic acid early transcript 1E	AB284505|H60b|667281|histocompatibility 60b	D64160|Raet1a|19368|retinoic acid early transcript 1, alpha	NM_009016|Raet1a|19368|retinoic acid early transcript 1, alpha	FJ594065|Raet1e|379043|retinoic acid early transcript 1E	FJ594067|Raet1e|379043|retinoic acid early transcript 1E	FJ594068|Raet1e|379043|retinoic acid early transcript 1E
mm9_v1_chr7_-_139791248_139791319	0.843038	HIF1A.p2	BC139757|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF222444|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF222445|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223361|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223362|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223363|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223674|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223675|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	NM_009123|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)
mm9_v1_chr3_+_69120782_69120852	0.841333	HIF1A.p2	AK032529|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	AK045724|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	AK147876|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	AK165160|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	AK142789|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	AK220523|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	AK035912|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	AK147389|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	BC096031|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	NM_178726|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like	AK131646|Ppm1l|242083|protein phosphatase 1 (formerly 2C)-like
mm9_v1_chr9_+_95758015_95758123	0.840735	HIF1A.p2	AK157757|Atr|245000|ataxia telangiectasia and Rad3 related	NM_019864|Atr|245000|ataxia telangiectasia and Rad3 related	AK139834|Atr|245000|ataxia telangiectasia and Rad3 related	AK142244|Atr|245000|ataxia telangiectasia and Rad3 related	AK162661|Atr|245000|ataxia telangiectasia and Rad3 related	AK157754|Atr|245000|ataxia telangiectasia and Rad3 related	AK030118|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene	AK171072|Atr|245000|ataxia telangiectasia and Rad3 related	AK170039|Atr|245000|ataxia telangiectasia and Rad3 related	AK135538|Atr|245000|ataxia telangiectasia and Rad3 related
mm9_v1_chr5_+_120881778_120882006	0.836849	HIF1A.p2	U61155|Lhx5|16873|LIM homeobox protein 5	AK140208|Lhx5|16873|LIM homeobox protein 5	NM_008499|Lhx5|16873|LIM homeobox protein 5	AK048778|Lhx5|16873|LIM homeobox protein 5	AK033927|Lhx5|16873|LIM homeobox protein 5	BC057585|Lhx5|16873|LIM homeobox protein 5
mm9_v1_chr1_-_36996371_36996496	0.834603	HIF1A.p2	AK139317|Tmem131|56030|transmembrane protein 131	NM_018872|Tmem131|56030|transmembrane protein 131
mm9_v1_chr7_-_126138572_126138593	0.834537	HIF1A.p2	AK032047|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B
mm9_v1_chr4_-_34830178_34830200	0.83344	HIF1A.p2	AK017652|Zfp292|30046|zinc finger protein 292	AK018067|Zfp292|30046|zinc finger protein 292	NM_013889|Zfp292|30046|zinc finger protein 292	BC036997|Zfp292|30046|zinc finger protein 292
mm9_v1_chr11_-_88579487_88579510	0.833395	HIF1A.p2	BC109368|LOC100504473|100504473|RNA-binding protein Musashi homolog 2-like	BC111809|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr18_-_80666366_80666458	0.83254	HIF1A.p2	BC053435|Ctdp1|67655|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	NM_026295|Ctdp1|67655|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	AK044530|Ctdp1|67655|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	AK156617|Ctdp1|67655|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
mm9_v1_chr17_+_25377114_25377187	0.83252	HIF1A.p2	AK158743|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	NM_001163718|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	NM_026676|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK002309|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK003675|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK170074|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	BC089019|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK169072|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene
mm9_v1_chr15_+_80502276_80502298	0.831797	HIF1A.p2	AK145865|Fam83f|213956|family with sequence similarity 83, member F	NM_145986|Fam83f|213956|family with sequence similarity 83, member F	AK030342|Fam83f|213956|family with sequence similarity 83, member F	BC016600|Fam83f|213956|family with sequence similarity 83, member F
mm9_v1_chr3_-_105490320_105490491	0.831652	HIF1A.p2	AK050950|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF217000|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF217001|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AJ250027|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AK154518|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC125471|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC137721|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	NM_017397|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF220454|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
mm9_v1_chr19_-_14672540_14672588	0.830621	HIF1A.p2	AK134989|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	BC086631|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr4_+_151699834_151699937	0.829554	HIF1A.p2	BC096390|Rpl22|19934|ribosomal protein L22
mm9_v1_chr6_+_125081890_125081965	0.827473	HIF1A.p2	NM_138747|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	AK079914|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	AK154006|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	AK156568|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	BC007151|Nop2|110109|NOP2 nucleolar protein homolog (yeast)
mm9_v1_chr6_+_18798568_18798703	0.823961	HIF1A.p2	BC019458|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	NM_133939|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AK154446|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AK008067|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AK088664|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AK167674|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit
mm9_v1_chr2_-_13977688_13977761	0.822705	HIF1A.p2	BC138116|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	BC141017|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
mm9_v1_chr3_-_116365414_116365594	0.81978	HIF1A.p2	AK135865|Hiat1|15247|hippocampus abundant gene transcript 1	BC118047|Hiat1|15247|hippocampus abundant gene transcript 1	D88315|Hiat1|15247|hippocampus abundant gene transcript 1	AK004779|Hiat1|15247|hippocampus abundant gene transcript 1	AK169626|Hiat1|15247|hippocampus abundant gene transcript 1	AK158838|Hiat1|15247|hippocampus abundant gene transcript 1	NM_008246|Hiat1|15247|hippocampus abundant gene transcript 1
mm9_v1_chr9_+_102737229_102737361	0.818428	HIF1A.p2	L21707|Ryk|20187|receptor-like tyrosine kinase	NM_001042607|Ryk|20187|receptor-like tyrosine kinase	NM_013649|Ryk|20187|receptor-like tyrosine kinase	L02210|Ryk|20187|receptor-like tyrosine kinase	M98547|Ryk|20187|receptor-like tyrosine kinase	AK144355|Ryk|20187|receptor-like tyrosine kinase	L38394|Ryk|20187|receptor-like tyrosine kinase
mm9_v1_chr3_+_19088109_19088272	0.818127	HIF1A.p2	DQ369744|Mtfr1|67472|mitochondrial fission regulator 1	AK075992|Mtfr1|67472|mitochondrial fission regulator 1	AK018048|Mtfr1|67472|mitochondrial fission regulator 1	AK004846|Mtfr1|67472|mitochondrial fission regulator 1	NM_026182|Mtfr1|67472|mitochondrial fission regulator 1	AK075822|Mtfr1|67472|mitochondrial fission regulator 1	AK009195|Mtfr1|67472|mitochondrial fission regulator 1	AK134822|Mtfr1|67472|mitochondrial fission regulator 1	BC019971|Mtfr1|67472|mitochondrial fission regulator 1
mm9_v1_chr5_-_134790277_134790348	0.816811	HIF1A.p2	BC047387|Gtf2i|14886|general transcription factor II I
mm9_v1_chr11_+_68505612_68505615	0.814898	HIF1A.p2	AK029236|Myh10|77579|myosin, heavy polypeptide 10, non-muscle	BC098465|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr8_+_125641346_125641374	0.809262	HIF1A.p2	AK049823|Cpne7|102278|copine VII	BC119328|Cpne7|102278|copine VII	BC137595|Cpne7|102278|copine VII
mm9_v1_chr7_+_28233013_28233084	0.806572	HIF1A.p2	BC006617|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))	AK153153|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))
mm9_v1_chr18_-_24762236_24762282	0.806372	HIF1A.p2	AK028976|Slc39a6|106957|solute carrier family 39 (metal ion transporter), member 6
mm9_v1_chr16_+_35022507_35022577	0.802777	HIF1A.p2	AF169286|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	BC131899|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	BC131901|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	AK148143|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	BC027289|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	AK018144|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
mm9_v1_chr12_+_8778152_8778192	0.802038	HIF1A.p2	AK132236|Sdc1|20969|syndecan 1	AK143529|Sdc1|20969|syndecan 1
mm9_v1_chr16_-_18089085_18089282	0.800173	HIF1A.p2	BC125327|Prodh|19125|proline dehydrogenase	BC008548|Prodh|19125|proline dehydrogenase	U80020|Prodh|19125|proline dehydrogenase	AF120279|Prodh|19125|proline dehydrogenase	AK144068|Prodh|19125|proline dehydrogenase	AK085938|Prodh|19125|proline dehydrogenase	NM_011172|Prodh|19125|proline dehydrogenase
mm9_v1_chr3_+_105762425_105762460	0.795013	HIF1A.p2	AK012014|Wdr77|70465|WD repeat domain 77	AK161812|Wdr77|70465|WD repeat domain 77	BC005755|Wdr77|70465|WD repeat domain 77
mm9_v1_chr14_+_75530926_75530966	0.794967	HIF1A.p2	
mm9_v1_chr2_+_167757867_167757914	0.787478	HIF1A.p2	AK156281|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK149979|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK165949|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK166020|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK170620|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK171380|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK168772|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK150322|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK172206|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK153088|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK168255|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	BC010191|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	M97590|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK151371|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr2_-_73613381_73613446	0.786968	HIF1A.p2	NM_001113246|Chn1|108699|chimerin (chimaerin) 1	NM_001166603|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr13_+_73398198_73398306	0.782068	HIF1A.p2	AF124732|Irx4|50916|Iroquois related homeobox 4 (Drosophila)	BC126942|Irx4|50916|Iroquois related homeobox 4 (Drosophila)
mm9_v1_chr3_+_151873407_151873495	0.779355	HIF1A.p2	AK028418|Fubp1|51886|far upstream element (FUSE) binding protein 1	NM_057172|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK167730|Fubp1|51886|far upstream element (FUSE) binding protein 1	BC023780|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK032517|Fubp1|51886|far upstream element (FUSE) binding protein 1	BC014763|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK029458|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK079204|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK138011|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK166066|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK160815|Fubp1|51886|far upstream element (FUSE) binding protein 1
mm9_v1_chr9_+_72773456_72773456	0.778927	HIF1A.p2	AK011208|Pygo1|72135|pygopus 1	NM_028116|Pygo1|72135|pygopus 1
mm9_v1_chr6_-_72849854_72850037	0.777786	HIF1A.p2	NM_019715|Kcmf1|74287|potassium channel modulatory factor 1
mm9_v1_chr3_-_87599083_87599136	0.776177	HIF1A.p2	AK081588|Ntrk1|18211|neurotrophic tyrosine kinase, receptor, type 1	NM_001033124|Ntrk1|18211|neurotrophic tyrosine kinase, receptor, type 1
mm9_v1_chr2_+_92025639_92025639	0.775074	HIF1A.p2	AK037174|Phf21a|192285|PHD finger protein 21A	NM_001109691|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr14_+_35487052_35487113	0.773065	HIF1A.p2	AK046038|Wapal|218914|wings apart-like homolog (Drosophila)	AK129105|Wapal|218914|wings apart-like homolog (Drosophila)	NM_001004436|Wapal|218914|wings apart-like homolog (Drosophila)
mm9_v1_chr2_-_169956719_169956719	0.772975	HIF1A.p2	AK156475|Zfp217|228913|zinc finger protein 217	NM_001033299|Zfp217|228913|zinc finger protein 217
mm9_v1_chr12_-_99812921_99812948	0.772684	HIF1A.p2	AK019376|Kcnk10|72258|potassium channel, subfamily K, member 10
mm9_v1_chr7_-_4787775_4787856	0.769604	HIF1A.p2	AK085127|Shisa7|232813|shisa homolog 7 (Xenopus laevis)	AK145016|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr15_-_83386114_83386196	0.7661	HIF1A.p2	BC099494|Mcat|223722|malonyl CoA:ACP acyltransferase (mitochondrial)	NM_001030014|Mcat|223722|malonyl CoA:ACP acyltransferase (mitochondrial)	AK135457|Mcat|223722|malonyl CoA:ACP acyltransferase (mitochondrial)
mm9_v1_chr11_-_82684653_82684724	0.765874	HIF1A.p2	AK159442|Rffl|67338|ring finger and FYVE like domain containing protein	AK150541|Rffl|67338|ring finger and FYVE like domain containing protein	AK169988|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001007465|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164569|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164571|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr11_-_54601093_54601128	0.765301	HIF1A.p2	BC048935|Cdc42se2|72729|CDC42 small effector 2	AK080473|Cdc42se2|72729|CDC42 small effector 2	AK146313|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr5_-_137462712_137462731	0.764945	HIF1A.p2	BC026751|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr12_+_112916302_112916387	0.764664	HIF1A.p2	NM_001099792|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	NM_001099793|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	NM_177374|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	AK133579|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	AK049138|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	AK032824|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	BC051186|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)
mm9_v1_chr2_+_102498839_102498845	0.76194	HIF1A.p2	AK134609|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077514|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK140095|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr1_+_43009716_43009807	0.760769	HIF1A.p2	AK054151|Gpr45|93690|G protein-coupled receptor 45	NM_053107|Gpr45|93690|G protein-coupled receptor 45	AK035091|Gpr45|93690|G protein-coupled receptor 45	AK039769|Gpr45|93690|G protein-coupled receptor 45
mm9_v1_chrX_-_49034524_49034544	0.760027	HIF1A.p2	AK031649|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr8_-_107165567_107165632	0.76001	HIF1A.p2	BC055880|Fam96b|68523|family with sequence similarity 96, member B	AK003830|Fam96b|68523|family with sequence similarity 96, member B	NM_026753|Fam96b|68523|family with sequence similarity 96, member B
mm9_v1_chr2_+_153567020_153567113	0.759781	HIF1A.p2	NM_007896|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC043333|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK154245|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK013626|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	U51196|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK146206|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC052728|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC064444|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1
mm9_v1_chr8_-_109948891_109948958	0.757897	HIF1A.p2	BC054835|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK054034|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK075755|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC117992|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC117993|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	NM_026277|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC034900|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK021194|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC103793|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK165521|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
mm9_v1_chr3_-_51144470_51144612	0.756625	HIF1A.p2	AK160118|Elf2|69257|E74-like factor 2	AK139199|Elf2|69257|E74-like factor 2	BC069901|Elf2|69257|E74-like factor 2	AK146819|Elf2|69257|E74-like factor 2
mm9_v1_chr11_+_57458925_57459050	0.755082	HIF1A.p2	AK162424|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	NM_134189|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK143714|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK159362|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK159088|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	BC060617|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK131155|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK172609|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10
mm9_v1_chr5_-_66089061_66089225	0.753913	HIF1A.p2	NM_001081321|Pds5a|71521|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
mm9_v1_chr13_+_73468441_73468488	0.753866	HIF1A.p2	AK160778|Mrpl36|94066|mitochondrial ribosomal protein L36	BC009166|Mrpl36|94066|mitochondrial ribosomal protein L36	NM_053163|Mrpl36|94066|mitochondrial ribosomal protein L36	AK131597|Mrpl36|94066|mitochondrial ribosomal protein L36	AK131601|Mrpl36|94066|mitochondrial ribosomal protein L36	AK131604|Mrpl36|94066|mitochondrial ribosomal protein L36	AK075780|Mrpl36|94066|mitochondrial ribosomal protein L36	AB049655|Mrpl36|94066|mitochondrial ribosomal protein L36
mm9_v1_chr8_+_109417539_109417610	0.751239	HIF1A.p2	NM_011574|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	BC068113|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK144455|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK146263|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK150862|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK168470|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK173318|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)
mm9_v1_chr13_-_101545800_101545853	0.747032	HIF1A.p2	AK012907|Cenph|26886|centromere protein H	BC025084|Cenph|26886|centromere protein H	AK011264|Cenph|26886|centromere protein H	AK011739|Cenph|26886|centromere protein H	AK006208|Cenph|26886|centromere protein H	AK011738|Cenph|26886|centromere protein H	AK010533|Cenph|26886|centromere protein H	AB017634|Cenph|26886|centromere protein H	NM_021886|Cenph|26886|centromere protein H
mm9_v1_chr5_-_23953594_23953663	0.74497	HIF1A.p2	AY603379|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	AK008109|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	BC019547|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	AB030183|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	NM_022418|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1
mm9_v1_chr3_+_137286635_137286835	0.744808	HIF1A.p2	AK018944|Ddit4l|73284|DNA-damage-inducible transcript 4-like	NM_030143|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK006617|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK053333|Ddit4l|73284|DNA-damage-inducible transcript 4-like	BC038131|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AF335325|Ddit4l|73284|DNA-damage-inducible transcript 4-like
mm9_v1_chr12_+_110031153_110031195	0.744271	HIF1A.p2	AK166542|Yy1|22632|YY1 transcription factor
mm9_v1_chr9_+_74709673_74709752	0.743634	HIF1A.p2	BC024053|Onecut1|15379|one cut domain, family member 1	NM_008262|Onecut1|15379|one cut domain, family member 1
mm9_v1_chr15_+_78861339_78861436	0.743573	HIF1A.p2	AK087433|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AF093403|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AK013138|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AK075782|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AK007395|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
mm9_v1_chr10_+_79727708_79727903	0.742487	HIF1A.p2	NM_001122604|Dazap1|70248|DAZ associated protein 1	NM_001122605|Dazap1|70248|DAZ associated protein 1	NM_133188|Dazap1|70248|DAZ associated protein 1	AK152314|Dazap1|70248|DAZ associated protein 1	AK152345|Dazap1|70248|DAZ associated protein 1	BC049355|Dazap1|70248|DAZ associated protein 1	BC058775|Dazap1|70248|DAZ associated protein 1	AF225910|Dazap1|70248|DAZ associated protein 1	AK148023|Dazap1|70248|DAZ associated protein 1
mm9_v1_chr10_-_127648817_127648880	0.742241	HIF1A.p2	BC014757|Spryd4|66701|SPRY domain containing 4	NM_025716|Spryd4|66701|SPRY domain containing 4	AK014623|Spryd4|66701|SPRY domain containing 4	AK080726|Spryd4|66701|SPRY domain containing 4	AK082745|Spryd4|66701|SPRY domain containing 4
mm9_v1_chr6_+_108778633_108778716	0.740388	HIF1A.p2	AK030943|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	NM_138677|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AB042828|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK151668|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK152724|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK129090|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK152979|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK082920|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	BC023237|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1
mm9_v1_chr12_-_114167705_114167755	0.737693	HIF1A.p2	AF038572|Jag2|16450|jagged 2	NM_010588|Jag2|16450|jagged 2
mm9_v1_chr8_+_86521498_86521570	0.735742	HIF1A.p2	NM_001081415|Samd1|666704|sterile alpha motif domain containing 1
mm9_v1_chr6_+_29222698_29222749	0.735528	HIF1A.p2	BC083056|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene	AF141311|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene
mm9_v1_chr11_-_54601133_54601161	0.735324	HIF1A.p2	BC034079|Cdc42se2|72729|CDC42 small effector 2	AK088090|Cdc42se2|72729|CDC42 small effector 2	AK090381|Cdc42se2|72729|CDC42 small effector 2	AK012983|Cdc42se2|72729|CDC42 small effector 2	AK039301|Cdc42se2|72729|CDC42 small effector 2	AK135775|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr6_-_125263750_125263903	0.730252	HIF1A.p2	BC138590|Ltbr|17000|lymphotoxin B receptor	BC138591|Ltbr|17000|lymphotoxin B receptor	AK146127|Ltbr|17000|lymphotoxin B receptor	L38423|Ltbr|17000|lymphotoxin B receptor	U29173|Ltbr|17000|lymphotoxin B receptor	NM_010736|Ltbr|17000|lymphotoxin B receptor
mm9_v1_chr1_-_145549758_145549813	0.72741	HIF1A.p2	BC031127|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	NM_145991|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr17_+_35138281_35138402	0.72589	HIF1A.p2	
mm9_v1_chr15_-_88564636_88564674	0.72584	HIF1A.p2	NM_001033274|Brd1|223770|bromodomain containing 1	AK149714|Brd1|223770|bromodomain containing 1
mm9_v1_chr16_+_17233664_17233756	0.723228	HIF1A.p2	AK157276|Hic2|58180|hypermethylated in cancer 2	AK156332|Hic2|58180|hypermethylated in cancer 2	NM_178922|Hic2|58180|hypermethylated in cancer 2	BC065124|Hic2|58180|hypermethylated in cancer 2	AK129266|Hic2|58180|hypermethylated in cancer 2	AK084975|Hic2|58180|hypermethylated in cancer 2
mm9_v1_chr15_-_75900118_75900213	0.722143	HIF1A.p2	BC060689|Scrib|105782|scribbled homolog (Drosophila)	BC062888|Scrib|105782|scribbled homolog (Drosophila)	AF441233|Scrib|105782|scribbled homolog (Drosophila)	NM_134089|Scrib|105782|scribbled homolog (Drosophila)	AK122211|Scrib|105782|scribbled homolog (Drosophila)
mm9_v1_chr7_-_31741956_31742036	0.719363	HIF1A.p2	AK158906|Usf2|22282|upstream transcription factor 2
mm9_v1_chr7_-_135605026_135605189	0.717459	HIF1A.p2	NM_009383|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	AK132677|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm9_v1_chr5_+_21292545_21292623	0.712004	HIF1A.p2	U61283|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	BC005462|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	AK153413|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	AK168548|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	AK146919|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	AK005083|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm9_v1_chr4_+_56815193_56815243	0.711382	HIF1A.p2	NM_001081420|BC026590|230234|cDNA sequence BC026590	AK043588|BC026590|230234|cDNA sequence BC026590	BC026590|BC026590|230234|cDNA sequence BC026590
mm9_v1_chr8_-_109417431_109417531	0.710281	HIF1A.p2	AK030924|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK165993|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	NM_145412|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK087721|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK088257|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
mm9_v1_chr11_-_76031013_76031165	0.708351	HIF1A.p2	BC031425|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK028076|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK165864|Gemin4|276919|gem (nuclear organelle) associated protein 4	BC062157|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK141078|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK154061|Gemin4|276919|gem (nuclear organelle) associated protein 4	NM_177367|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK133821|Gemin4|276919|gem (nuclear organelle) associated protein 4
mm9_v1_chr13_+_14705508_14705551	0.707491	HIF1A.p2	AK136115|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	NM_008944|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK151883|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK152862|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK167752|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012990|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK035578|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK154011|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012119|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	BC026768|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AF099733|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2
mm9_v1_chr5_+_65361309_65361366	0.707429	HIF1A.p2	AM162548|Fam114a1|68303|family with sequence similarity 114, member A1	BC110359|Fam114a1|68303|family with sequence similarity 114, member A1	AK030360|Fam114a1|68303|family with sequence similarity 114, member A1	NM_026667|Fam114a1|68303|family with sequence similarity 114, member A1	AK014725|Fam114a1|68303|family with sequence similarity 114, member A1	BC027235|Fam114a1|68303|family with sequence similarity 114, member A1	AK020262|Fam114a1|68303|family with sequence similarity 114, member A1	AK007950|Fam114a1|68303|family with sequence similarity 114, member A1	AK017336|Fam114a1|68303|family with sequence similarity 114, member A1	BC089499|Fam114a1|68303|family with sequence similarity 114, member A1
mm9_v1_chr11_+_68505576_68505611	0.707378	HIF1A.p2	AK047340|Myh10|77579|myosin, heavy polypeptide 10, non-muscle	AK163604|Myh10|77579|myosin, heavy polypeptide 10, non-muscle	AK052435|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr5_+_76612903_76613006	0.70691	HIF1A.p2	NM_011626|Tmem165|21982|transmembrane protein 165	BC037638|Tmem165|21982|transmembrane protein 165	AK004829|Tmem165|21982|transmembrane protein 165	M23568|Tmem165|21982|transmembrane protein 165
mm9_v1_chr7_+_87171113_87171302	0.704388	HIF1A.p2	NM_175433|Zfp710|209225|zinc finger protein 710	AK155416|Zfp710|209225|zinc finger protein 710	BC060641|Zfp710|209225|zinc finger protein 710	AK083979|Zfp710|209225|zinc finger protein 710	BC058640|Zfp710|209225|zinc finger protein 710
mm9_v1_chr3_-_129534201_129534313	0.702317	HIF1A.p2	BC021873|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	BC048685|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	NM_026578|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)
mm9_v1_chr10_-_75905451_75905555	0.70231	HIF1A.p2	BC100380|Pcnt|18541|pericentrin (kendrin)	BC034865|Pcnt|18541|pericentrin (kendrin)	BC085244|Pcnt|18541|pericentrin (kendrin)	AK145315|Pcnt|18541|pericentrin (kendrin)	AB207233|Pcnt|18541|pericentrin (kendrin)
mm9_v1_chr9_-_36604816_36604957	0.701703	HIF1A.p2	AK147776|Ei24|13663|etoposide induced 2.4 mRNA	AK159927|Ei24|13663|etoposide induced 2.4 mRNA	AK145018|Ei24|13663|etoposide induced 2.4 mRNA	AK172233|Ei24|13663|etoposide induced 2.4 mRNA
mm9_v1_chr3_-_95799859_95799946	0.699776	HIF1A.p2	AK170922|Plekho1|67220|pleckstrin homology domain containing, family O member 1	AK170025|Plekho1|67220|pleckstrin homology domain containing, family O member 1	AK012945|Plekho1|67220|pleckstrin homology domain containing, family O member 1
mm9_v1_chr9_-_57612906_57612972	0.69705	HIF1A.p2	AK090215|Clk3|102414|CDC-like kinase 3	AK140015|Clk3|102414|CDC-like kinase 3	BC085084|Clk3|102414|CDC-like kinase 3	AK133936|Clk3|102414|CDC-like kinase 3	AK154003|Clk3|102414|CDC-like kinase 3	AK145880|Clk3|102414|CDC-like kinase 3	AK136481|Clk3|102414|CDC-like kinase 3
mm9_v1_chr10_+_19311761_19311893	0.697004	HIF1A.p2	NM_010511|Ifngr1|15979|interferon gamma receptor 1	AK087525|Ifngr1|15979|interferon gamma receptor 1	M26711|Ifngr1|15979|interferon gamma receptor 1	M28233|Ifngr1|15979|interferon gamma receptor 1	AK169593|Ifngr1|15979|interferon gamma receptor 1	J05265|Ifngr1|15979|interferon gamma receptor 1	AK151079|Ifngr1|15979|interferon gamma receptor 1	AK159359|Ifngr1|15979|interferon gamma receptor 1	AF128216|Ifngr1|15979|interferon gamma receptor 1	AF128217|Ifngr1|15979|interferon gamma receptor 1	AY157836|Ifngr1|15979|interferon gamma receptor 1	AY157837|Ifngr1|15979|interferon gamma receptor 1	AK153347|Ifngr1|15979|interferon gamma receptor 1	AK150503|Ifngr1|15979|interferon gamma receptor 1	AK152085|Ifngr1|15979|interferon gamma receptor 1	AK152384|Ifngr1|15979|interferon gamma receptor 1	AK153084|Ifngr1|15979|interferon gamma receptor 1	BC132599|Ifngr1|15979|interferon gamma receptor 1	BC138617|Ifngr1|15979|interferon gamma receptor 1	M25764|Ifngr1|15979|interferon gamma receptor 1	AK159660|Ifngr1|15979|interferon gamma receptor 1	AK159839|Ifngr1|15979|interferon gamma receptor 1	M28995|Ifngr1|15979|interferon gamma receptor 1
mm9_v1_chr16_+_32608981_32609106	0.693231	HIF1A.p2	NM_011638|Tfrc|22042|transferrin receptor	AK048228|Tfrc|22042|transferrin receptor	AK088961|Tfrc|22042|transferrin receptor	BC054522|Tfrc|22042|transferrin receptor
mm9_v1_chr7_+_30093030_30093065	0.692644	HIF1A.p2	AK142419|Dpf1|29861|D4, zinc and double PHD fingers family 1	U48239|Dpf1|29861|D4, zinc and double PHD fingers family 1
mm9_v1_chr14_-_32064403_32064537	0.691722	HIF1A.p2	AK005852|Phf7|71838|PHD finger protein 7	NM_027949|Phf7|71838|PHD finger protein 7	AK005673|Phf7|71838|PHD finger protein 7	AK148191|Phf7|71838|PHD finger protein 7	BC049113|Phf7|71838|PHD finger protein 7
mm9_v1_chr4_+_147965596_147965685	0.689092	HIF1A.p2	AK028359|Srm|20810|spermidine synthase	NM_009272|Srm|20810|spermidine synthase	AK051101|Srm|20810|spermidine synthase	BC005566|Srm|20810|spermidine synthase	L19311|Srm|20810|spermidine synthase	AK146395|Srm|20810|spermidine synthase
mm9_v1_chr5_+_32761332_32761346	0.68609	HIF1A.p2	NM_172707|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166416|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chrX_-_7000037_7000113	0.685606	HIF1A.p2	BC072610|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	AF038507|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	AK008437|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene
mm9_v1_chr17_-_31649139_31649255	0.682894	HIF1A.p2	AK213574|Wdr4|57773|WD repeat domain 4	AK164160|Wdr4|57773|WD repeat domain 4	AJ271892|Wdr4|57773|WD repeat domain 4	AJ271893|Wdr4|57773|WD repeat domain 4	AK035125|Wdr4|57773|WD repeat domain 4	BC039272|Wdr4|57773|WD repeat domain 4	AK152271|Wdr4|57773|WD repeat domain 4	AK153161|Wdr4|57773|WD repeat domain 4	AK144821|Wdr4|57773|WD repeat domain 4
mm9_v1_chr19_-_6057706_6057798	0.682752	HIF1A.p2	AK210880|Mrpl49|18120|mitochondrial ribosomal protein L49	BC028956|Mrpl49|18120|mitochondrial ribosomal protein L49	AK007712|Mrpl49|18120|mitochondrial ribosomal protein L49	AK014723|Mrpl49|18120|mitochondrial ribosomal protein L49	AK027949|Mrpl49|18120|mitochondrial ribosomal protein L49	AK049794|Mrpl49|18120|mitochondrial ribosomal protein L49	AK077397|Mrpl49|18120|mitochondrial ribosomal protein L49	NM_026246|Mrpl49|18120|mitochondrial ribosomal protein L49	AK003040|Mrpl49|18120|mitochondrial ribosomal protein L49	AK150572|Mrpl49|18120|mitochondrial ribosomal protein L49	AK150715|Mrpl49|18120|mitochondrial ribosomal protein L49	AK011273|Mrpl49|18120|mitochondrial ribosomal protein L49
mm9_v1_chr9_-_21657048_21657078	0.682673	HIF1A.p2	AK049320|Dock6|319899|dedicator of cytokinesis 6	AK080190|Dock6|319899|dedicator of cytokinesis 6	AK145109|Dock6|319899|dedicator of cytokinesis 6	NM_177030|Dock6|319899|dedicator of cytokinesis 6
mm9_v1_chr9_-_56008819_56008825	0.681132	HIF1A.p2	AK159418|Tspan3|56434|tetraspanin 3
mm9_v1_chr1_-_33814537_33814587	0.678383	HIF1A.p2	AK083600|Bag2|213539|BCL2-associated athanogene 2	AK051352|Bag2|213539|BCL2-associated athanogene 2	BC028944|Bag2|213539|BCL2-associated athanogene 2	AK144720|Bag2|213539|BCL2-associated athanogene 2
mm9_v1_chr11_+_83777922_83777974	0.677414	HIF1A.p2	NM_001115009|Synrg|217030|synergin, gamma	BC056370|Synrg|217030|synergin, gamma	NM_194341|Synrg|217030|synergin, gamma
mm9_v1_chr2_+_163484132_163484240	0.672267	HIF1A.p2	AK164716|Pkig|18769|protein kinase inhibitor, gamma	AK168614|Pkig|18769|protein kinase inhibitor, gamma	NM_001164053|Pkig|18769|protein kinase inhibitor, gamma	AK184424|Pkig|18769|protein kinase inhibitor, gamma	AK186035|Pkig|18769|protein kinase inhibitor, gamma	AK186927|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr3_+_82859422_82859482	0.671461	HIF1A.p2	AK080068|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK077197|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	NM_016784|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK075993|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK076007|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chr8_-_36558514_36558598	0.670273	HIF1A.p2	AK165026|Eri1|67276|exoribonuclease 1	BC046412|Eri1|67276|exoribonuclease 1	AK172005|Eri1|67276|exoribonuclease 1	AK144223|Eri1|67276|exoribonuclease 1	AK014041|Eri1|67276|exoribonuclease 1	AK014410|Eri1|67276|exoribonuclease 1	NM_026067|Eri1|67276|exoribonuclease 1
mm9_v1_chr3_+_88101037_88101138	0.668784	HIF1A.p2	AK031293|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158223|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK089548|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK146360|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK161630|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK171160|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	NM_009836|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	Z31556|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC054776|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK168052|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC139465|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC139467|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK154043|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158254|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158272|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK156836|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)
mm9_v1_chr10_+_23943322_23943408	0.66845	HIF1A.p2	AK014340|Moxd1|59012|monooxygenase, DBH-like 1	NM_021509|Moxd1|59012|monooxygenase, DBH-like 1	AK081586|Moxd1|59012|monooxygenase, DBH-like 1	AK030274|Moxd1|59012|monooxygenase, DBH-like 1	AK162030|Moxd1|59012|monooxygenase, DBH-like 1	AB041606|Moxd1|59012|monooxygenase, DBH-like 1	BC037684|Moxd1|59012|monooxygenase, DBH-like 1	BC057652|Moxd1|59012|monooxygenase, DBH-like 1
mm9_v1_chr7_-_31758390_31758487	0.667808	HIF1A.p2	AK167463|Lsr|54135|lipolysis stimulated lipoprotein receptor	NM_001164184|Lsr|54135|lipolysis stimulated lipoprotein receptor	NM_001164185|Lsr|54135|lipolysis stimulated lipoprotein receptor	NM_017405|Lsr|54135|lipolysis stimulated lipoprotein receptor
mm9_v1_chr4_-_120242805_120242900	0.665807	HIF1A.p2	AK161110|Ctps|51797|cytidine 5'-triphosphate synthase	AK148259|Ctps|51797|cytidine 5'-triphosphate synthase	BC006698|Ctps|51797|cytidine 5'-triphosphate synthase	AK164232|Ctps|51797|cytidine 5'-triphosphate synthase	U49350|Ctps|51797|cytidine 5'-triphosphate synthase	AK146476|Ctps|51797|cytidine 5'-triphosphate synthase	NM_016748|Ctps|51797|cytidine 5'-triphosphate synthase
mm9_v1_chr6_-_29162226_29162288	0.664131	HIF1A.p2	BC053416|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1	NM_011829|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1
mm9_v1_chr5_-_3647805_3647982	0.663944	HIF1A.p2	BC019449|Gatad1|67210|GATA zinc finger domain containing 1	AK078416|Gatad1|67210|GATA zinc finger domain containing 1	AB047921|Gatad1|67210|GATA zinc finger domain containing 1	AK012921|Gatad1|67210|GATA zinc finger domain containing 1	NM_026033|Gatad1|67210|GATA zinc finger domain containing 1
mm9_v1_chr9_-_107888185_107888220	0.66364	HIF1A.p2	BC115538|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK020090|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK076092|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene
mm9_v1_chr17_+_24563575_24563652	0.663072	HIF1A.p2	AK004838|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	AK029481|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	NM_010023|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	AK077386|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	BC054444|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	BC022712|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	Z14049|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)
mm9_v1_chr4_+_124663673_124663851	0.662126	HIF1A.p2	AB016768|Rspo1|192199|R-spondin homolog (Xenopus laevis)	NM_138683|Rspo1|192199|R-spondin homolog (Xenopus laevis)	AK132277|Rspo1|192199|R-spondin homolog (Xenopus laevis)
mm9_v1_chr1_+_121422719_121422789	0.661985	HIF1A.p2	AK031130|Tmem185b|226351|transmembrane protein 185B	BC020408|Tmem185b|226351|transmembrane protein 185B	BC024712|Tmem185b|226351|transmembrane protein 185B	NM_146103|Tmem185b|226351|transmembrane protein 185B
mm9_v1_chr5_-_92738981_92739016	0.660064	HIF1A.p2	BC042708|Sdad1|231452|SDA1 domain containing 1	AK164608|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr10_+_111409750_111409849	0.659851	HIF1A.p2	NM_178610|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK012108|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK045526|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK036447|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK146926|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC089510|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK011972|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK030560|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK032472|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK041854|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK168675|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC094236|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr3_+_105762363_105762420	0.659603	HIF1A.p2	AK078856|Wdr77|70465|WD repeat domain 77	AK048488|Wdr77|70465|WD repeat domain 77	AK168752|Wdr77|70465|WD repeat domain 77	AK050391|Wdr77|70465|WD repeat domain 77	AK168006|Wdr77|70465|WD repeat domain 77	NM_027432|Wdr77|70465|WD repeat domain 77	AK169128|Wdr77|70465|WD repeat domain 77	AK163839|Wdr77|70465|WD repeat domain 77
mm9_v1_chr2_+_80155828_80155945	0.659375	HIF1A.p2	AK169020|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK165652|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK128945|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK004617|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK028184|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	BC033461|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK166502|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK013930|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AF255459|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10
mm9_v1_chr1_+_122017763_122017771	0.659013	HIF1A.p2	AK014026|3110009E18Rik|73103|RIKEN cDNA 3110009E18 gene	NM_001172074|3110009E18Rik|73103|RIKEN cDNA 3110009E18 gene	NM_028439|3110009E18Rik|73103|RIKEN cDNA 3110009E18 gene	BC028767|3110009E18Rik|73103|RIKEN cDNA 3110009E18 gene
mm9_v1_chr19_-_14672472_14672537	0.658714	HIF1A.p2	AK017548|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	NM_011600|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr10_+_80532812_80532901	0.658574	HIF1A.p2	NM_022653|Thop1|50492|thimet oligopeptidase 1	BC031722|Thop1|50492|thimet oligopeptidase 1	BC003211|Thop1|50492|thimet oligopeptidase 1	AF314187|Thop1|50492|thimet oligopeptidase 1	AK028609|Thop1|50492|thimet oligopeptidase 1
mm9_v1_chr4_-_43058685_43058696	0.658126	HIF1A.p2	BC044832|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene
mm9_v1_chrX_-_165111764_165111833	0.656175	HIF1A.p2	AK146208|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	BC010226|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	AK148898|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	AF117066|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	NM_010832|Msl3|17692|male-specific lethal 3 homolog (Drosophila)
mm9_v1_chr7_-_52347489_52347600	0.656058	HIF1A.p2	BC092069|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK077943|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK082762|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK086705|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK132143|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC025602|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC055903|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	NM_026555|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain
mm9_v1_chr11_-_54601163_54601250	0.655739	HIF1A.p2	AK145931|Cdc42se2|72729|CDC42 small effector 2	AK160934|Cdc42se2|72729|CDC42 small effector 2	NM_178626|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr11_-_119216770_119216851	0.653744	HIF1A.p2	AK141266|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AF153827|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AF304053|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AF304054|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	BC130268|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AK034220|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AK052266|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AK128926|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	NM_018822|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AK076267|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)
mm9_v1_chr17_+_24857052_24857220	0.651526	HIF1A.p2	AK012360|Rps2|16898|ribosomal protein S2	AK146259|Rps2|16898|ribosomal protein S2	AK166664|Rps2|16898|ribosomal protein S2	BC087956|Rps2|16898|ribosomal protein S2	AK004568|Rps2|16898|ribosomal protein S2	AK019265|Rps2|16898|ribosomal protein S2	AK151119|Rps2|16898|ribosomal protein S2	AK151985|Rps2|16898|ribosomal protein S2	AK152299|Rps2|16898|ribosomal protein S2	AK159121|Rps2|16898|ribosomal protein S2	AK159138|Rps2|16898|ribosomal protein S2	AK163821|Rps2|16898|ribosomal protein S2	AK166549|Rps2|16898|ribosomal protein S2	AK166726|Rps2|16898|ribosomal protein S2	AK167799|Rps2|16898|ribosomal protein S2	AK167974|Rps2|16898|ribosomal protein S2	AK168307|Rps2|16898|ribosomal protein S2	AK168528|Rps2|16898|ribosomal protein S2	AK169119|Rps2|16898|ribosomal protein S2	AK167033|Rps2|16898|ribosomal protein S2	AK168630|Rps2|16898|ribosomal protein S2	BC002186|Rps2|16898|ribosomal protein S2	BC091730|Rps2|16898|ribosomal protein S2	BC091755|Rps2|16898|ribosomal protein S2	BC092286|Rps2|16898|ribosomal protein S2	BC094058|Rps2|16898|ribosomal protein S2	BC094273|Rps2|16898|ribosomal protein S2	BC106136|Rps2|16898|ribosomal protein S2	BC110678|Rps2|16898|ribosomal protein S2	BC116446|Rps2|16898|ribosomal protein S2	BC093493|Rps2|16898|ribosomal protein S2	BC117558|Rps2|16898|ribosomal protein S2	AF283559|Rps2|16898|ribosomal protein S2
mm9_v1_chr5_+_140019846_140019918	0.651041	HIF1A.p2	AK082472|Uncx|22255|UNC homeobox	NM_013702|Uncx|22255|UNC homeobox	AF247550|Uncx|22255|UNC homeobox	Z96107|Uncx|22255|UNC homeobox	BC051973|Uncx|22255|UNC homeobox	AJ001116|Uncx|22255|UNC homeobox	S83543|Uncx|22255|UNC homeobox
mm9_v1_chr10_-_60610238_60610394	0.649638	HIF1A.p2	AK036747|Sgpl1|20397|sphingosine phosphate lyase 1	AK150053|Sgpl1|20397|sphingosine phosphate lyase 1	AK173137|Sgpl1|20397|sphingosine phosphate lyase 1	AF036894|Sgpl1|20397|sphingosine phosphate lyase 1	BC026135|Sgpl1|20397|sphingosine phosphate lyase 1	AK037789|Sgpl1|20397|sphingosine phosphate lyase 1	AK043024|Sgpl1|20397|sphingosine phosphate lyase 1	AK049342|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr14_-_104867215_104867215	0.643681	HIF1A.p2	AY706205|Pou4f1|18996|POU domain, class 4, transcription factor 1	NM_011143|Pou4f1|18996|POU domain, class 4, transcription factor 1
mm9_v1_chr10_-_77472453_77472498	0.64245	HIF1A.p2	J03928|Pfkl|18641|phosphofructokinase, liver, B-type	AK036318|Pfkl|18641|phosphofructokinase, liver, B-type	BC052914|Pfkl|18641|phosphofructokinase, liver, B-type	AK159328|Pfkl|18641|phosphofructokinase, liver, B-type	BC020097|Pfkl|18641|phosphofructokinase, liver, B-type	BC029336|Pfkl|18641|phosphofructokinase, liver, B-type	AK081313|Pfkl|18641|phosphofructokinase, liver, B-type	AK030511|Pfkl|18641|phosphofructokinase, liver, B-type	AK008812|Pfkl|18641|phosphofructokinase, liver, B-type	AK168660|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr7_-_71083734_71083823	0.641922	HIF1A.p2	AJ245644|Klf13|50794|Kruppel-like factor 13	AJ275987|Klf13|50794|Kruppel-like factor 13	BC051557|Klf13|50794|Kruppel-like factor 13	AK155298|Klf13|50794|Kruppel-like factor 13	AF251796|Klf13|50794|Kruppel-like factor 13	NM_021366|Klf13|50794|Kruppel-like factor 13
mm9_v1_chr3_-_58329639_58329732	0.641877	HIF1A.p2	AK167482|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK050508|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150809|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151323|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153056|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153118|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153286|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK166052|Serp1|28146|stress-associated endoplasmic reticulum protein 1	BC002114|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151384|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK166004|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150659|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152373|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152882|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153138|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK075776|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK144732|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151669|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152583|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153415|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK169049|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK167952|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150005|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150025|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150368|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150770|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151853|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152383|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168569|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168734|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168754|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168947|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AB041655|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK032680|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK148485|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150428|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150714|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151456|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152636|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152806|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152996|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK159271|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK161595|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168046|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK169175|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK170734|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK002653|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK149786|Serp1|28146|stress-associated endoplasmic reticulum protein 1
mm9_v1_chr11_-_23397858_23397918	0.640873	HIF1A.p2	BC064012|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	BC055873|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)
mm9_v1_chr15_-_34424934_34424961	0.639985	HIF1A.p2	BC092375|Hrsp12|15473|heat-responsive protein 12
mm9_v1_chr6_-_49164469_49164732	0.639257	HIF1A.p2	AB046173|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	BC045138|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	BC049082|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	AK011797|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	AK088465|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	AK011689|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3
mm9_v1_chr5_+_125343129_125343133	0.638377	HIF1A.p2	AK035022|Zfp664|269704|zinc finger protein 664
mm9_v1_chr16_+_23989051_23989160	0.637077	HIF1A.p2	
mm9_v1_chr4_+_151413427_151413471	0.636105	HIF1A.p2	AK047599|Nol9|74035|nucleolar protein 9	AK164493|Nol9|74035|nucleolar protein 9	NM_001159599|Nol9|74035|nucleolar protein 9	NM_028727|Nol9|74035|nucleolar protein 9	BC024877|Nol9|74035|nucleolar protein 9	AK172043|Nol9|74035|nucleolar protein 9	AK014568|Nol9|74035|nucleolar protein 9	AK050948|Nol9|74035|nucleolar protein 9	AK157956|Nol9|74035|nucleolar protein 9	BC125432|Nol9|74035|nucleolar protein 9	BC132099|Nol9|74035|nucleolar protein 9	AK157398|Nol9|74035|nucleolar protein 9	AK079935|Nol9|74035|nucleolar protein 9	AK046761|Nol9|74035|nucleolar protein 9	BC096599|Nol9|74035|nucleolar protein 9	AK042581|Nol9|74035|nucleolar protein 9	BC051109|Nol9|74035|nucleolar protein 9
mm9_v1_chr16_-_13903055_13903162	0.636069	HIF1A.p2	BC005541|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	AK165587|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	AK030613|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	AK033107|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	AK163696|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	AK004611|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1
mm9_v1_chr13_+_91062764_91062789	0.635276	HIF1A.p2	BC100603|Rps23|66475|ribosomal protein S23	AK002573|Rps23|66475|ribosomal protein S23	AK010594|Rps23|66475|ribosomal protein S23	AK012287|Rps23|66475|ribosomal protein S23	AK013720|Rps23|66475|ribosomal protein S23	AK088085|Rps23|66475|ribosomal protein S23	AK010608|Rps23|66475|ribosomal protein S23	AK050580|Rps23|66475|ribosomal protein S23	AK012574|Rps23|66475|ribosomal protein S23	AK012438|Rps23|66475|ribosomal protein S23	AK168587|Rps23|66475|ribosomal protein S23	NM_001100608|Gm15450|100038875|predicted gene 15450	BC002145|Rps23|66475|ribosomal protein S23	BC054435|Rps23|66475|ribosomal protein S23	BC078418|Rps23|66475|ribosomal protein S23
mm9_v1_chrX_-_45866446_45866665	0.634979	HIF1A.p2	AK211196|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AF100927|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AK133764|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	BC003292|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	DQ016499|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	NM_012019|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1
mm9_v1_chr4_-_22415277_22415277	0.63493	HIF1A.p2	NM_008899|Pou3f2|18992|POU domain, class 3, transcription factor 2
mm9_v1_chr1_-_120207674_120207826	0.634325	HIF1A.p2	AK181409|Tsn|22099|translin	AK183078|Tsn|22099|translin	AK184665|Tsn|22099|translin	AK189586|Tsn|22099|translin	AK198107|Tsn|22099|translin	AK199692|Tsn|22099|translin	AK202525|Tsn|22099|translin	AK010737|Tsn|22099|translin	AF234179|Tsn|22099|translin	NM_011650|Tsn|22099|translin	X81464|Tsn|22099|translin	BC004615|Tsn|22099|translin	AK165598|Tsn|22099|translin	AK011220|Tsn|22099|translin	AK150529|Tsn|22099|translin	AK151448|Tsn|22099|translin
mm9_v1_chr16_+_31664022_31664124	0.633894	HIF1A.p2	AK220189|Dlg1|13383|discs, large homolog 1 (Drosophila)	BC057118|Dlg1|13383|discs, large homolog 1 (Drosophila)	NM_007862|Dlg1|13383|discs, large homolog 1 (Drosophila)
mm9_v1_chr3_+_21975544_21975859	0.633504	HIF1A.p2	AK036064|Tbl1xr1|81004|transducin (beta)-like 1X-linked receptor 1	NM_030732|Tbl1xr1|81004|transducin (beta)-like 1X-linked receptor 1	AK033347|Tbl1xr1|81004|transducin (beta)-like 1X-linked receptor 1
mm9_v1_chr7_-_59117613_59117656	0.633189	HIF1A.p2	NM_001115087|Fancf|100040608|Fanconi anemia, complementation group F
mm9_v1_chr18_-_34166105_34166254	0.631798	HIF1A.p2	BC089158|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	AK140485|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a
mm9_v1_chr11_+_57615080_57615164	0.631513	HIF1A.p2	BC051686|Sap30l|50724|SAP30-like	NM_001081168|Sap30l|50724|SAP30-like	BC094930|Sap30l|50724|SAP30-like
mm9_v1_chr9_-_56008595_56008764	0.629713	HIF1A.p2	AK089494|Tspan3|56434|tetraspanin 3	AK154919|Tspan3|56434|tetraspanin 3	AB009021|Tspan3|56434|tetraspanin 3	AF133427|Tspan3|56434|tetraspanin 3	AB072450|Tspan3|56434|tetraspanin 3	AK053325|Tspan3|56434|tetraspanin 3	AK141951|Tspan3|56434|tetraspanin 3	AK006798|Tspan3|56434|tetraspanin 3	AK152175|Tspan3|56434|tetraspanin 3
mm9_v1_chr11_-_113613040_113613139	0.628988	HIF1A.p2	AF165114|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4	BC003857|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4	AK075739|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4	AK165318|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4	NM_001163346|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4
mm9_v1_chr3_-_100914081_100914100	0.628642	HIF1A.p2	AF152344|Ptgfrn|19221|prostaglandin F2 receptor negative regulator	NM_011197|Ptgfrn|19221|prostaglandin F2 receptor negative regulator	BC145713|Ptgfrn|19221|prostaglandin F2 receptor negative regulator	BC145715|Ptgfrn|19221|prostaglandin F2 receptor negative regulator
mm9_v1_chr14_-_70843185_70843279	0.628117	HIF1A.p2	AK156587|Polr3d|67065|polymerase (RNA) III (DNA directed) polypeptide D	BC016102|Polr3d|67065|polymerase (RNA) III (DNA directed) polypeptide D	NM_025945|Polr3d|67065|polymerase (RNA) III (DNA directed) polypeptide D
mm9_v1_chr18_-_9450104_9450192	0.623722	HIF1A.p2	BC023321|Ccny|67974|cyclin Y	AK028696|Ccny|67974|cyclin Y	NM_026484|Ccny|67974|cyclin Y	AK014201|Ccny|67974|cyclin Y
mm9_v1_chr18_+_67801208_67801282	0.621216	HIF1A.p2	AB031387|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK006069|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	NM_134138|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK167840|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK135578|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK077569|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	BC016606|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2
mm9_v1_chr7_+_133839443_133839523	0.620722	HIF1A.p2	BC061197|Bola2|66162|bolA-like 2 (E. coli)	BC045523|Bola2|66162|bolA-like 2 (E. coli)	AK028165|Bola2|66162|bolA-like 2 (E. coli)	AK002662|Bola2|66162|bolA-like 2 (E. coli)	AK003922|Bola2|66162|bolA-like 2 (E. coli)	NM_175103|Bola2|66162|bolA-like 2 (E. coli)	AK140279|Bola2|66162|bolA-like 2 (E. coli)
mm9_v1_chr7_+_112885103_112885239	0.620701	HIF1A.p2	NM_001161724|Ilk|16202|integrin linked kinase	AK011766|Ilk|16202|integrin linked kinase	AK154207|Ilk|16202|integrin linked kinase	AK002344|Ilk|16202|integrin linked kinase	NM_010562|Ilk|16202|integrin linked kinase
mm9_v1_chr16_-_18235102_18235235	0.620677	HIF1A.p2	AY668947|Zdhhc8|27801|zinc finger, DHHC domain containing 8	AY894892|Zdhhc8|27801|zinc finger, DHHC domain containing 8	NM_172151|Zdhhc8|27801|zinc finger, DHHC domain containing 8
mm9_v1_chr4_-_123089122_123089187	0.620313	HIF1A.p2	AK085936|D830031N03Rik|442834|RIKEN cDNA D830031N03 gene	NM_001167918|D830031N03Rik|442834|RIKEN cDNA D830031N03 gene
mm9_v1_chr2_-_28771940_28771959	0.620249	HIF1A.p2	NM_019446|Barhl1|54422|BarH-like 1 (Drosophila)	AB043980|Barhl1|54422|BarH-like 1 (Drosophila)	BC055731|Barhl1|54422|BarH-like 1 (Drosophila)	NM_001164186|Barhl1|54422|BarH-like 1 (Drosophila)
mm9_v1_chr10_+_93610663_93610767	0.619324	HIF1A.p2	AK146891|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	NM_011629|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK053907|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC090662|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC094580|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK149374|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1
mm9_v1_chr6_+_83059068_83059160	0.617878	HIF1A.p2	BC022162|Mrpl53|68499|mitochondrial ribosomal protein L53	AK003549|Mrpl53|68499|mitochondrial ribosomal protein L53	NM_026744|Mrpl53|68499|mitochondrial ribosomal protein L53
mm9_v1_chr2_+_131088210_131088303	0.617549	HIF1A.p2	AK082821|Pank2|74450|pantothenate kinase 2	NM_153501|Pank2|74450|pantothenate kinase 2	AK159175|Pank2|74450|pantothenate kinase 2	AK154080|Pank2|74450|pantothenate kinase 2	BC106184|Pank2|74450|pantothenate kinase 2	AK154023|Pank2|74450|pantothenate kinase 2
mm9_v1_chr18_+_7868803_7868858	0.61754	HIF1A.p2	AK156780|Wac|225131|WW domain containing adaptor with coiled-coil	AK172416|Wac|225131|WW domain containing adaptor with coiled-coil	BC020146|Wac|225131|WW domain containing adaptor with coiled-coil
mm9_v1_chr5_-_31210054_31210143	0.615411	HIF1A.p2	BC082316|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK002453|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK005413|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK009384|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK010297|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	NM_001134692|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	BC002177|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK019285|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK002224|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK003569|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chr6_+_86315639_86315728	0.614069	HIF1A.p2	BC103775|Fam136a|66488|family with sequence similarity 136, member A	BC024049|Fam136a|66488|family with sequence similarity 136, member A	NM_025591|Fam136a|66488|family with sequence similarity 136, member A	AK008550|Fam136a|66488|family with sequence similarity 136, member A	AK005280|Fam136a|66488|family with sequence similarity 136, member A	AK141279|Fam136a|66488|family with sequence similarity 136, member A	CT010180|Fam136a|66488|family with sequence similarity 136, member A	BC013621|Fam136a|66488|family with sequence similarity 136, member A
mm9_v1_chr11_-_60624733_60624766	0.612573	HIF1A.p2	NM_009171|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)
mm9_v1_chr8_-_106919551_106919743	0.612202	HIF1A.p2	BC028852|Cmtm4|97487|CKLF-like MARVEL transmembrane domain containing 4	AF479815|Cmtm4|97487|CKLF-like MARVEL transmembrane domain containing 4	NM_153582|Cmtm4|97487|CKLF-like MARVEL transmembrane domain containing 4
mm9_v1_chr1_-_155396839_155396845	0.611943	HIF1A.p2	BC022734|Npl|74091|N-acetylneuraminate pyruvate lyase	AK154216|F630010C12Rik|100038670|RIKEN cDNA F630010C12 gene	AK002734|Npl|74091|N-acetylneuraminate pyruvate lyase	NM_028749|Npl|74091|N-acetylneuraminate pyruvate lyase	AK088859|Npl|74091|N-acetylneuraminate pyruvate lyase
mm9_v1_chr11_-_101327431_101327547	0.611855	HIF1A.p2	BC085504|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159310|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC025496|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK170371|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC099678|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154965|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154178|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159315|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK160891|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK034795|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK155342|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	NM_012037|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK145193|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)
mm9_v1_chr10_-_39966784_39966854	0.610029	HIF1A.p2	AK051135|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	NM_001042556|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK020030|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AB041810|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK017678|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK013395|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK011644|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK012641|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK010776|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK012188|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	NM_023323|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)
mm9_v1_chr11_-_23397927_23397986	0.608975	HIF1A.p2	BC038397|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	BC052829|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK033696|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK093945|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	NM_172391|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK154196|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK155265|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK137116|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)
mm9_v1_chr5_-_33972218_33972258	0.608642	HIF1A.p2	AK010537|Fam53a|74504|family with sequence similarity 53, member A	AK155077|Fam53a|74504|family with sequence similarity 53, member A	AK086386|Fam53a|74504|family with sequence similarity 53, member A	AK163326|Fam53a|74504|family with sequence similarity 53, member A
mm9_v1_chr1_-_167932735_167932770	0.604496	HIF1A.p2	X68363|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68362|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489477|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489478|Pou2f1|18986|POU domain, class 2, transcription factor 1	BC066201|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68364|Pou2f1|18986|POU domain, class 2, transcription factor 1	AF508939|Pou2f1|18986|POU domain, class 2, transcription factor 1	AY177625|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK044830|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK028237|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_011137|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198932|Pou2f1|18986|POU domain, class 2, transcription factor 1
mm9_v1_chr15_-_97661807_97661936	0.603992	HIF1A.p2	AF207749|Hdac7|56233|histone deacetylase 7	AK040406|Hdac7|56233|histone deacetylase 7	AK150041|Hdac7|56233|histone deacetylase 7	AK036586|Hdac7|56233|histone deacetylase 7	AK044287|Hdac7|56233|histone deacetylase 7
mm9_v1_chr9_+_103207488_103207656	0.601481	HIF1A.p2	AK085031|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK129104|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK084654|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK084869|Topbp1|235559|topoisomerase (DNA) II binding protein 1	BC049797|Topbp1|235559|topoisomerase (DNA) II binding protein 1	NM_176979|Topbp1|235559|topoisomerase (DNA) II binding protein 1
mm9_v1_chr4_-_152856922_152856938	0.600769	HIF1A.p2	NM_001099299|Ajap1|230959|adherens junction associated protein 1
mm9_v1_chr5_-_39076043_39076064	0.60074	HIF1A.p2	NM_001081144|Zfp518b|100515|zinc finger protein 518B	NM_001177902|Zfp518b|100515|zinc finger protein 518B
mm9_v1_chr7_-_97129012_97129054	0.600166	HIF1A.p2	AK133890|Eed|13626|embryonic ectoderm development	AK087924|Eed|13626|embryonic ectoderm development	AK131976|Eed|13626|embryonic ectoderm development
mm9_v1_chr13_-_51196061_51196096	0.600137	HIF1A.p2	AK083743|9430083A17Rik|77428|RIKEN cDNA 9430083A17 gene	AK157883|9430083A17Rik|77428|RIKEN cDNA 9430083A17 gene	AK158202|9430083A17Rik|77428|RIKEN cDNA 9430083A17 gene
mm9_v1_chr12_+_33505364_33505391	0.599238	HIF1A.p2	AY679720|Nampt|59027|nicotinamide phosphoribosyltransferase	AK086415|Nampt|59027|nicotinamide phosphoribosyltransferase	AK153926|Nampt|59027|nicotinamide phosphoribosyltransferase	BC004059|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr4_-_116855158_116855228	0.598274	HIF1A.p2	AK150222|Kif2c|73804|kinesin family member 2C	AK088047|Kif2c|73804|kinesin family member 2C	BC006841|Kif2c|73804|kinesin family member 2C	AK015046|Kif2c|73804|kinesin family member 2C	NM_134471|Kif2c|73804|kinesin family member 2C
mm9_v1_chr18_+_24867945_24868023	0.597567	HIF1A.p2	AB078608|Fhod3|225288|formin homology 2 domain containing 3	AB078609|Fhod3|225288|formin homology 2 domain containing 3	AB100088|Fhod3|225288|formin homology 2 domain containing 3	NM_175276|Fhod3|225288|formin homology 2 domain containing 3	AK148245|Fhod3|225288|formin homology 2 domain containing 3	BC138046|Fhod3|225288|formin homology 2 domain containing 3
mm9_v1_chr9_+_100543993_100544033	0.596321	HIF1A.p2	Z75332|Stag1|20842|stromal antigen 1	AK134316|Stag1|20842|stromal antigen 1
mm9_v1_chr9_+_120480575_120480642	0.595819	HIF1A.p2	AK141887|Rpl14|67115|ribosomal protein L14	AK010600|Rpl14|67115|ribosomal protein L14	AK002946|Rpl14|67115|ribosomal protein L14	AK007807|Rpl14|67115|ribosomal protein L14	AK012277|Rpl14|67115|ribosomal protein L14	AK013912|Rpl14|67115|ribosomal protein L14	AK167146|Rpl14|67115|ribosomal protein L14	NM_025974|Rpl14|67115|ribosomal protein L14
mm9_v1_chr2_+_30663433_30663516	0.594455	HIF1A.p2	AK009056|Mettl11a|66617|methyltransferase like 11A	AK011888|Mettl11a|66617|methyltransferase like 11A	AK154783|Mettl11a|66617|methyltransferase like 11A	AK011960|Mettl11a|66617|methyltransferase like 11A	BC027220|Mettl11a|66617|methyltransferase like 11A	NM_170592|Mettl11a|66617|methyltransferase like 11A
mm9_v1_chr11_-_120442851_120442887	0.593368	HIF1A.p2	BC086755|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	BC004732|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK156819|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK172140|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr19_-_17431079_17431156	0.593356	HIF1A.p2	BC039126|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK199888|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK045216|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK167048|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	D87333|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	NM_173442|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2
mm9_v1_chr1_+_183282758_183282760	0.591038	HIF1A.p2	AK013789|Cnih3|72978|cornichon homolog 3 (Drosophila)	NM_001160211|Cnih3|72978|cornichon homolog 3 (Drosophila)	NM_001160212|Cnih3|72978|cornichon homolog 3 (Drosophila)	NM_028408|Cnih3|72978|cornichon homolog 3 (Drosophila)	AK033911|Cnih3|72978|cornichon homolog 3 (Drosophila)
mm9_v1_chr2_+_3035692_3035956	0.590197	HIF1A.p2	BC138175|Fam171a1|269233|family with sequence similarity 171, member A1	BC145171|Fam171a1|269233|family with sequence similarity 171, member A1	AK077831|Fam171a1|269233|family with sequence similarity 171, member A1
mm9_v1_chr5_-_135115175_135115219	0.589988	HIF1A.p2	AK169312|Eif4h|22384|eukaryotic translation initiation factor 4H	AK149841|Eif4h|22384|eukaryotic translation initiation factor 4H	AK136999|Eif4h|22384|eukaryotic translation initiation factor 4H	AK135390|Eif4h|22384|eukaryotic translation initiation factor 4H	AK166567|Eif4h|22384|eukaryotic translation initiation factor 4H	AK169353|Eif4h|22384|eukaryotic translation initiation factor 4H	NM_033561|Eif4h|22384|eukaryotic translation initiation factor 4H	AK045004|Eif4h|22384|eukaryotic translation initiation factor 4H	AK150088|Eif4h|22384|eukaryotic translation initiation factor 4H	BC014796|Eif4h|22384|eukaryotic translation initiation factor 4H	AK088818|Eif4h|22384|eukaryotic translation initiation factor 4H	AK168872|Eif4h|22384|eukaryotic translation initiation factor 4H	AK169407|Eif4h|22384|eukaryotic translation initiation factor 4H	AK132034|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr6_+_29222664_29222676	0.589498	HIF1A.p2	AK144676|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene	AK009377|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene
mm9_v1_chr5_-_65726802_65726885	0.587378	HIF1A.p2	U07157|Rfc1|19687|replication factor C (activator 1) 1	X72711|Rfc1|19687|replication factor C (activator 1) 1	BC085174|Rfc1|19687|replication factor C (activator 1) 1	U01222|Rfc1|19687|replication factor C (activator 1) 1	U36441|Rfc1|19687|replication factor C (activator 1) 1	BC085173|Rfc1|19687|replication factor C (activator 1) 1	AK136937|Rfc1|19687|replication factor C (activator 1) 1	AK132028|Rfc1|19687|replication factor C (activator 1) 1	AK146164|Rfc1|19687|replication factor C (activator 1) 1	AK146314|Rfc1|19687|replication factor C (activator 1) 1	NM_011258|Rfc1|19687|replication factor C (activator 1) 1	U15037|Rfc1|19687|replication factor C (activator 1) 1
mm9_v1_chr12_+_86629540_86629669	0.586783	HIF1A.p2	NM_172414|Fam164c|72350|family with sequence similarity 164, member C	AK036602|Fam164c|72350|family with sequence similarity 164, member C	BC049940|Fam164c|72350|family with sequence similarity 164, member C	AK032455|Fam164c|72350|family with sequence similarity 164, member C	AK033213|Fam164c|72350|family with sequence similarity 164, member C	AK012642|Fam164c|72350|family with sequence similarity 164, member C
mm9_v1_chr13_+_51747065_51747139	0.586025	HIF1A.p2	AK156076|Secisbp2|75420|SECIS binding protein 2	BC125391|Secisbp2|75420|SECIS binding protein 2	BC144795|Secisbp2|75420|SECIS binding protein 2	NM_029279|Secisbp2|75420|SECIS binding protein 2	BC125393|Secisbp2|75420|SECIS binding protein 2	AK012732|Secisbp2|75420|SECIS binding protein 2	AK168634|Secisbp2|75420|SECIS binding protein 2	AK037988|Secisbp2|75420|SECIS binding protein 2	AK030021|Secisbp2|75420|SECIS binding protein 2
mm9_v1_chr11_+_64792527_64792682	0.585314	HIF1A.p2	AK156730|Elac2|68626|elaC homolog 2 (E. coli)	NM_023479|Elac2|68626|elaC homolog 2 (E. coli)	AK172604|Elac2|68626|elaC homolog 2 (E. coli)	BC023134|Elac2|68626|elaC homolog 2 (E. coli)	AF308696|Elac2|68626|elaC homolog 2 (E. coli)	BC048235|Elac2|68626|elaC homolog 2 (E. coli)
mm9_v1_chr11_+_60230781_60230944	0.584074	HIF1A.p2	AK164644|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	BC052418|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	AK012042|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	BC046821|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	AK142753|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	BC044901|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene
mm9_v1_chr8_-_64238814_64238834	0.583253	HIF1A.p2	AK173081|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr16_+_32877857_32877985	0.58304	HIF1A.p2	NM_001159349|Fyttd1|69823|forty-two-three domain containing 1	NM_027226|Fyttd1|69823|forty-two-three domain containing 1	AK139638|Fyttd1|69823|forty-two-three domain containing 1	AK161252|Fyttd1|69823|forty-two-three domain containing 1	AK008130|Fyttd1|69823|forty-two-three domain containing 1	AK050479|Fyttd1|69823|forty-two-three domain containing 1	AK157602|Fyttd1|69823|forty-two-three domain containing 1	AK166032|Fyttd1|69823|forty-two-three domain containing 1	AK170511|Fyttd1|69823|forty-two-three domain containing 1	AK014447|Fyttd1|69823|forty-two-three domain containing 1	BC010204|Fyttd1|69823|forty-two-three domain containing 1	AK050448|Fyttd1|69823|forty-two-three domain containing 1	AK165633|Fyttd1|69823|forty-two-three domain containing 1	BC028253|Fyttd1|69823|forty-two-three domain containing 1	AK029785|Fyttd1|69823|forty-two-three domain containing 1	AJ344096|Fyttd1|69823|forty-two-three domain containing 1
mm9_v1_chr19_-_27504303_27504360	0.578766	HIF1A.p2	AK088081|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	AK141893|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	BC145533|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	NM_177474|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	AK050829|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	BC016186|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
mm9_v1_chr17_+_39981964_39982030	0.578539	HIF1A.p2	
mm9_v1_chr10_+_126817878_126817965	0.574972	HIF1A.p2	
mm9_v1_chr10_+_80392814_80392835	0.573884	HIF1A.p2	AK154952|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	AK010420|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	AK149895|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	BC023815|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	NM_008655|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	X54149|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta
mm9_v1_chr11_-_88579517_88579542	0.572747	HIF1A.p2	AK156439|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049637|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049688|Msi2|76626|Musashi homolog 2 (Drosophila)	NM_054043|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chrX_+_10294490_10294637	0.572136	HIF1A.p2	NM_001166635|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	NM_026524|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK160062|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK090003|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK159166|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK172143|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	BC004014|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	BC052899|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK151153|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm9_v1_chr7_+_4691716_4691802	0.571129	HIF1A.p2	AY555193|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	NM_001115018|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	NM_146177|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	AK154848|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	AK137449|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	BC024816|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)
mm9_v1_chr1_+_63223396_63223420	0.569899	HIF1A.p2	NM_018796|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr2_+_90744878_90745017	0.569272	HIF1A.p2	BC025103|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4	AK010998|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4	NM_025991|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4	AK014373|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4
mm9_v1_chr4_-_12098948_12098955	0.566102	HIF1A.p2	BC020162|Fam92a|68099|family with sequence similarity 92, member A
mm9_v1_chr4_+_101092307_101092393	0.562492	HIF1A.p2	NM_009647|Ak4|11639|adenylate kinase 4	AK144439|Ak4|11639|adenylate kinase 4	BC086791|Ak4|11639|adenylate kinase 4	D85036|Ak4|11639|adenylate kinase 4	AB020239|Ak4|11639|adenylate kinase 4	BC086663|Ak4|11639|adenylate kinase 4	AK166975|Ak4|11639|adenylate kinase 4
mm9_v1_chr6_+_29644178_29644255	0.562235	HIF1A.p2	AF276890|Tspan33|232670|tetraspanin 33	AK172176|Tspan33|232670|tetraspanin 33	AK004954|Tspan33|232670|tetraspanin 33	BC024685|Tspan33|232670|tetraspanin 33	NM_146173|Tspan33|232670|tetraspanin 33
mm9_v1_chr14_-_45938164_45938183	0.562188	HIF1A.p2	CT010195|Ero1l|50527|ERO1-like (S. cerevisiae)	CT010259|Ero1l|50527|ERO1-like (S. cerevisiae)
mm9_v1_chr11_-_78959969_78959986	0.561689	HIF1A.p2	AK164833|Ksr1|16706|kinase suppressor of ras 1
mm9_v1_chr8_-_127386864_127387004	0.557825	HIF1A.p2	AK166963|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK011944|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK165402|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK017273|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK012675|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK143919|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK166668|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	NM_025615|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	BC023675|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene
mm9_v1_chr7_-_107731579_107731643	0.557446	HIF1A.p2	AK077636|Mrpl48|52443|mitochondrial ribosomal protein L48	BC037190|Mrpl48|52443|mitochondrial ribosomal protein L48	AK019161|Mrpl48|52443|mitochondrial ribosomal protein L48	AK171917|Mrpl48|52443|mitochondrial ribosomal protein L48	NM_198831|Mrpl48|52443|mitochondrial ribosomal protein L48
mm9_v1_chr13_+_34254827_34254896	0.557399	HIF1A.p2	NM_001101430|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4	NM_001110515|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4	BC070417|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4
mm9_v1_chr1_+_63223689_63223722	0.556565	HIF1A.p2	BC039635|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK027911|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK168191|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	BC023139|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK012756|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	BC003899|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr3_-_9004404_9004540	0.556012	HIF1A.p2	U44426|Tpd52|21985|tumor protein D52	BC004068|Tpd52|21985|tumor protein D52	AK171050|Tpd52|21985|tumor protein D52	AK170725|Tpd52|21985|tumor protein D52	AK168379|Tpd52|21985|tumor protein D52	BC094018|Tpd52|21985|tumor protein D52	AK150935|Tpd52|21985|tumor protein D52	AK151471|Tpd52|21985|tumor protein D52	AK151744|Tpd52|21985|tumor protein D52	AK152543|Tpd52|21985|tumor protein D52	AK153266|Tpd52|21985|tumor protein D52	AK161753|Tpd52|21985|tumor protein D52	AK032111|Tpd52|21985|tumor protein D52	AK168817|Tpd52|21985|tumor protein D52	AK153292|Tpd52|21985|tumor protein D52	AK005456|Tpd52|21985|tumor protein D52	BC002036|Tpd52|21985|tumor protein D52	AK169751|Tpd52|21985|tumor protein D52	NM_001025263|Tpd52|21985|tumor protein D52	NM_001025264|Tpd52|21985|tumor protein D52	NM_009412|Tpd52|21985|tumor protein D52
mm9_v1_chr2_+_18598644_18598801	0.552994	HIF1A.p2	M64279|Bmi1|12151|Bmi1 polycomb ring finger oncogene	NM_007552|Bmi1|12151|Bmi1 polycomb ring finger oncogene
mm9_v1_chr7_+_140829357_140829384	0.551326	HIF1A.p2	NM_178115|2700050L05Rik|214764|RIKEN cDNA 2700050L05 gene	AK052387|2700050L05Rik|214764|RIKEN cDNA 2700050L05 gene
mm9_v1_chr3_+_87710187_87710249	0.551313	HIF1A.p2	NM_008231|Hdgf|15191|hepatoma-derived growth factor
mm9_v1_chr16_-_11254052_11254466	0.550173	HIF1A.p2	BC031640|Gspt1|14852|G1 to S phase transition 1	AK030760|Gspt1|14852|G1 to S phase transition 1	AK032059|Gspt1|14852|G1 to S phase transition 1	AK148603|Gspt1|14852|G1 to S phase transition 1	AK134128|Gspt1|14852|G1 to S phase transition 1	AK037929|Gspt1|14852|G1 to S phase transition 1	AK166626|Gspt1|14852|G1 to S phase transition 1	NM_001130008|Gspt1|14852|G1 to S phase transition 1	NM_146066|Gspt1|14852|G1 to S phase transition 1
mm9_v1_chr1_-_34496128_34496223	0.549662	HIF1A.p2	AK162237|Ccdc115|69668|coiled-coil domain containing 115	AK154179|Ccdc115|69668|coiled-coil domain containing 115
mm9_v1_chr10_+_62706550_62706579	0.549133	HIF1A.p2	AK019546|Herc4|67345|hect domain and RLD 4
mm9_v1_chr17_+_87506971_87507037	0.54908	HIF1A.p2	BC053015|Socs5|56468|suppressor of cytokine signaling 5	NM_019654|Socs5|56468|suppressor of cytokine signaling 5	AK135099|Socs5|56468|suppressor of cytokine signaling 5
mm9_v1_chr8_-_122082604_122082665	0.548815	HIF1A.p2	AK147336|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC011533|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC057198|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK029048|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK147495|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	NM_001167910|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	NM_019709|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr17_-_45710161_45710212	0.548267	HIF1A.p2	AK184233|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK191250|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK194406|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK195161|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK195294|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196279|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196368|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK197826|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK198614|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK216006|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK146809|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	M36829|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	BC002167|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	BC088985|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	M18186|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AF465639|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	NM_008302|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr2_+_31325818_31325829	0.548142	HIF1A.p2	AK149489|Ass1|11898|argininosuccinate synthetase 1	AK146635|Ass1|11898|argininosuccinate synthetase 1
mm9_v1_chr12_-_40764514_40764542	0.547753	HIF1A.p2	AK006286|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr11_-_115353104_115353170	0.547351	HIF1A.p2	AF078840|Nt5c|50773|5',3'-nucleotidase, cytosolic	NM_015807|Nt5c|50773|5',3'-nucleotidase, cytosolic	BC024368|Nt5c|50773|5',3'-nucleotidase, cytosolic	AK007418|Nt5c|50773|5',3'-nucleotidase, cytosolic
mm9_v1_chr5_-_5559500_5559542	0.547181	HIF1A.p2	NM_153116|Gtpbp10|207704|GTP-binding protein 10 (putative)	BC034507|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK139595|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK160252|Gtpbp10|207704|GTP-binding protein 10 (putative)
mm9_v1_chr15_+_76173936_76173991	0.545588	HIF1A.p2	AK011288|Cyc1|66445|cytochrome c-1	NM_025567|Cyc1|66445|cytochrome c-1	AK151299|Cyc1|66445|cytochrome c-1	AK170272|Cyc1|66445|cytochrome c-1	BC005620|Cyc1|66445|cytochrome c-1	AK002815|Cyc1|66445|cytochrome c-1	BC082790|Cyc1|66445|cytochrome c-1
mm9_v1_chr19_-_8955377_8955422	0.54471	HIF1A.p2	AK131892|AI462493|107197|expressed sequence AI462493	AY941793|AI462493|107197|expressed sequence AI462493	AK131602|AI462493|107197|expressed sequence AI462493	AK132116|AI462493|107197|expressed sequence AI462493	NM_001160356|AI462493|107197|expressed sequence AI462493
mm9_v1_chr16_-_22265901_22266018	0.544027	HIF1A.p2	BC057996|Tra2b|20462|transformer 2 beta homolog (Drosophila)	X80232|Tra2b|20462|transformer 2 beta homolog (Drosophila)	BC086795|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK080378|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK169483|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK152519|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK167387|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK077418|Tra2b|20462|transformer 2 beta homolog (Drosophila)	BC061177|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK150007|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK049573|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK152761|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK167544|Tra2b|20462|transformer 2 beta homolog (Drosophila)	NM_009186|Tra2b|20462|transformer 2 beta homolog (Drosophila)
mm9_v1_chr5_+_45911467_45911626	0.542594	HIF1A.p2	NM_025895|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK007855|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AF318060|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK154249|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	BC024941|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK003854|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK005681|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK201969|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)
mm9_v1_chr6_+_28373521_28373688	0.542278	HIF1A.p2	BC132452|Arf5|11844|ADP-ribosylation factor 5	BC138756|Arf5|11844|ADP-ribosylation factor 5	D87902|Arf5|11844|ADP-ribosylation factor 5	NM_007480|Arf5|11844|ADP-ribosylation factor 5
mm9_v1_chr1_-_134638287_134638341	0.541276	HIF1A.p2	AK138636|Nfasc|269116|neurofascin	AJ543322|Nfasc|269116|neurofascin
mm9_v1_chr4_+_140703847_140703905	0.540054	HIF1A.p2	AK165284|Fbxo42|213499|F-box protein 42	AK151503|Fbxo42|213499|F-box protein 42
mm9_v1_chr11_+_78156930_78157077	0.539801	HIF1A.p2	AF030169|Unc119|22248|unc-119 homolog (C. elegans)	AK131955|Unc119|22248|unc-119 homolog (C. elegans)	BC001990|Unc119|22248|unc-119 homolog (C. elegans)	NM_011676|Unc119|22248|unc-119 homolog (C. elegans)
mm9_v1_chr13_+_21271760_21271827	0.539676	HIF1A.p2	AK049314|Trim27|19720|tripartite motif-containing 27	NM_009054|Trim27|19720|tripartite motif-containing 27
mm9_v1_chr16_+_5050149_5050235	0.538764	HIF1A.p2	AK019173|Ubn1|170644|ubinuclein 1	AK147571|Ubn1|170644|ubinuclein 1	NM_026666|Ubn1|170644|ubinuclein 1	AK020146|Ubn1|170644|ubinuclein 1
mm9_v1_chr13_+_38437584_38437664	0.538204	HIF1A.p2	NM_007556|Bmp6|12161|bone morphogenetic protein 6	X80992|Bmp6|12161|bone morphogenetic protein 6	BC138593|Bmp6|12161|bone morphogenetic protein 6	BC138595|Bmp6|12161|bone morphogenetic protein 6
mm9_v1_chr10_+_5958432_5958574	0.538147	HIF1A.p2	AK132308|Zbtb2|381990|zinc finger and BTB domain containing 2	NM_001033466|Zbtb2|381990|zinc finger and BTB domain containing 2
mm9_v1_chr19_+_36484237_36484340	0.537894	HIF1A.p2	AK146133|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chr4_-_129419450_129419570	0.536535	HIF1A.p2	BC002051|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	U17046|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK146815|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	U17961|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK150687|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK152084|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	NM_011317|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK044927|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK050520|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK137122|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1
mm9_v1_chr16_-_96303958_96304070	0.536444	HIF1A.p2	BC095940|Brwd1|93871|bromodomain and WD repeat domain containing 1	BC145265|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292467|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292468|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK030493|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_001103179|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_145125|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_176928|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK051870|Brwd1|93871|bromodomain and WD repeat domain containing 1
mm9_v1_chr19_+_7049425_7049555	0.535598	HIF1A.p2	AK141152|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	X97490|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	BC082545|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	NM_008889|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm9_v1_chr7_+_148414663_148414708	0.534667	HIF1A.p2	NM_001081118|Phrf1|101471|PHD and ring finger domains 1
mm9_v1_chr4_-_58925575_58925638	0.53455	HIF1A.p2	AK087690|AI314180|230249|expressed sequence AI314180	BC058684|AI314180|230249|expressed sequence AI314180	NM_172381|AI314180|230249|expressed sequence AI314180	AK041579|AI314180|230249|expressed sequence AI314180
mm9_v1_chr9_-_26613989_26614018	0.533961	HIF1A.p2	AK143057|Glb1l2|244757|galactosidase, beta 1-like 2	BC038479|Glb1l2|244757|galactosidase, beta 1-like 2	NM_153803|Glb1l2|244757|galactosidase, beta 1-like 2	AK033400|Glb1l2|244757|galactosidase, beta 1-like 2
mm9_v1_chr5_+_140267449_140267530	0.533657	HIF1A.p2	AK143654|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	AK143717|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	NM_010757|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	D42124|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	AK153856|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	BC014295|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)
mm9_v1_chr6_-_39507815_39507904	0.533199	HIF1A.p2	AK048041|Dennd2a|209773|DENN/MADD domain containing 2A	AK081176|Dennd2a|209773|DENN/MADD domain containing 2A	NM_172477|Dennd2a|209773|DENN/MADD domain containing 2A
mm9_v1_chr12_+_81564081_81564252	0.532421	HIF1A.p2	AK167692|Exd2|97827|exonuclease 3'-5' domain containing 2	NM_133798|Exd2|97827|exonuclease 3'-5' domain containing 2	AK166390|Exd2|97827|exonuclease 3'-5' domain containing 2	AK146901|Exd2|97827|exonuclease 3'-5' domain containing 2	AK158201|Exd2|97827|exonuclease 3'-5' domain containing 2	AK164329|Exd2|97827|exonuclease 3'-5' domain containing 2	AK147922|Exd2|97827|exonuclease 3'-5' domain containing 2
mm9_v1_chr3_-_95799554_95799856	0.531931	HIF1A.p2	AF168675|Plekho1|67220|pleckstrin homology domain containing, family O member 1	NM_023320|Plekho1|67220|pleckstrin homology domain containing, family O member 1	BC117003|Plekho1|67220|pleckstrin homology domain containing, family O member 1	BC125441|Plekho1|67220|pleckstrin homology domain containing, family O member 1	AK014374|Plekho1|67220|pleckstrin homology domain containing, family O member 1
mm9_v1_chr11_-_70796471_70796535	0.530914	HIF1A.p2	AK010746|C1qbp|12261|complement component 1, q subcomponent binding protein	BC038075|C1qbp|12261|complement component 1, q subcomponent binding protein	AK169764|C1qbp|12261|complement component 1, q subcomponent binding protein	AK011868|C1qbp|12261|complement component 1, q subcomponent binding protein	NM_007573|C1qbp|12261|complement component 1, q subcomponent binding protein
mm9_v1_chr4_+_46502141_46502235	0.528565	HIF1A.p2	AK156254|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AB041263|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AK051157|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AK088912|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AK076290|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AK169211|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	NM_053179|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	BC057977|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)
mm9_v1_chr8_+_125641197_125641276	0.527473	HIF1A.p2	AK162900|Cpne7|102278|copine VII	NM_170684|Cpne7|102278|copine VII
mm9_v1_chr19_-_45080871_45080957	0.527277	HIF1A.p2	BC027676|Mrpl43|94067|mitochondrial ribosomal protein L43	BC065812|Mrpl43|94067|mitochondrial ribosomal protein L43	AK076204|Mrpl43|94067|mitochondrial ribosomal protein L43	AB049657|Mrpl43|94067|mitochondrial ribosomal protein L43	AK015357|Mrpl43|94067|mitochondrial ribosomal protein L43	BC048733|Mrpl43|94067|mitochondrial ribosomal protein L43	NM_053164|Mrpl43|94067|mitochondrial ribosomal protein L43
mm9_v1_chr15_+_9001154_9001214	0.526205	HIF1A.p2	BC115776|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr2_-_144096582_144096606	0.525358	HIF1A.p2	BC002242|Snx5|69178|sorting nexin 5
mm9_v1_chr12_+_79849976_79850002	0.524823	HIF1A.p2	AK032731|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK162014|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC075698|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK014444|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr8_-_75016484_75016582	0.524802	HIF1A.p2	NM_177766|Slc35e1|270066|solute carrier family 35, member E1
mm9_v1_chr5_+_53225253_53225293	0.524272	HIF1A.p2	AK166061|Anapc4|52206|anaphase promoting complex subunit 4
mm9_v1_chr5_+_35925685_35925861	0.523886	HIF1A.p2	BC044725|Acox3|80911|acyl-Coenzyme A oxidase 3, pristanoyl	BC055019|Acox3|80911|acyl-Coenzyme A oxidase 3, pristanoyl	NM_030721|Acox3|80911|acyl-Coenzyme A oxidase 3, pristanoyl	AK053960|Acox3|80911|acyl-Coenzyme A oxidase 3, pristanoyl	AK171598|Acox3|80911|acyl-Coenzyme A oxidase 3, pristanoyl	AK080942|Acox3|80911|acyl-Coenzyme A oxidase 3, pristanoyl	AK128922|Acox3|80911|acyl-Coenzyme A oxidase 3, pristanoyl	AK028818|Acox3|80911|acyl-Coenzyme A oxidase 3, pristanoyl	AJ278430|Acox3|80911|acyl-Coenzyme A oxidase 3, pristanoyl
mm9_v1_chr4_+_120339167_120339220	0.522902	HIF1A.p2	NM_019563|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK012136|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK154030|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC025116|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC080723|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AF143369|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132360|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132362|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4
mm9_v1_chr10_-_6373388_6373465	0.522345	HIF1A.p2	AK075931|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK160025|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK036284|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK028211|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK038579|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170785|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170786|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_172308|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm9_v1_chr13_+_100114738_100114812	0.520113	HIF1A.p2	AK076008|Mrps27|218506|mitochondrial ribosomal protein S27	NM_173757|Mrps27|218506|mitochondrial ribosomal protein S27	AK087686|Mrps27|218506|mitochondrial ribosomal protein S27	BC049149|Mrps27|218506|mitochondrial ribosomal protein S27
mm9_v1_chr19_+_46130978_46131205	0.519935	HIF1A.p2	NM_001081214|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK147947|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK044522|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK122322|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	BC066048|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK180476|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm9_v1_chr14_-_73109722_73109912	0.518841	HIF1A.p2	AK089380|Fndc3a|319448|fibronectin type III domain containing 3A	AK032733|Fndc3a|319448|fibronectin type III domain containing 3A	AK164398|Fndc3a|319448|fibronectin type III domain containing 3A	AK048586|Fndc3a|319448|fibronectin type III domain containing 3A	DQ192036|Fndc3a|319448|fibronectin type III domain containing 3A	NM_207636|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr13_-_56236756_56236903	0.518178	HIF1A.p2	AK143498|H2afy|26914|H2A histone family, member Y	AB071988|H2afy|26914|H2A histone family, member Y	BC006955|H2afy|26914|H2A histone family, member Y	AF171080|H2afy|26914|H2A histone family, member Y	AK039274|H2afy|26914|H2A histone family, member Y
mm9_v1_chr5_+_130230969_130230987	0.517691	HIF1A.p2	AJ001261|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr17_-_29144679_29144968	0.51746	HIF1A.p2	AK184259|Stk38|106504|serine/threonine kinase 38	AY292399|Stk38|106504|serine/threonine kinase 38	AK020024|Stk38|106504|serine/threonine kinase 38	AK133644|Stk38|106504|serine/threonine kinase 38	AK164081|Stk38|106504|serine/threonine kinase 38	AK084433|Stk38|106504|serine/threonine kinase 38	BC009658|Stk38|106504|serine/threonine kinase 38	NM_134115|Stk38|106504|serine/threonine kinase 38	AK035731|Stk38|106504|serine/threonine kinase 38	AK080179|Stk38|106504|serine/threonine kinase 38
mm9_v1_chr11_+_115626733_115626761	0.517362	HIF1A.p2	NM_028014|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene	AK155233|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr8_-_72877137_72877227	0.516639	HIF1A.p2	AK148196|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)	BC056442|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)	NM_001122829|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)	NM_030680|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)	AF182947|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)
mm9_v1_chr17_+_71533016_71533072	0.516589	HIF1A.p2	AK086834|Lpin2|64898|lipin 2
mm9_v1_chr11_+_102051080_102051165	0.516339	HIF1A.p2	AK165395|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	AY186239|G6pc3|68401|glucose 6 phosphatase, catalytic, 3
mm9_v1_chr13_+_32893882_32893918	0.516005	HIF1A.p2	AK050368|Wrnip1|78903|Werner helicase interacting protein 1	AK167570|Wrnip1|78903|Werner helicase interacting protein 1	NM_030215|Wrnip1|78903|Werner helicase interacting protein 1	AK170542|Wrnip1|78903|Werner helicase interacting protein 1	BC010482|Wrnip1|78903|Werner helicase interacting protein 1	AK170846|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr2_+_102498798_102498825	0.514046	HIF1A.p2	U75372|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr6_-_119494295_119494364	0.512414	HIF1A.p2	BC051406|Wnt5b|22419|wingless-related MMTV integration site 5B	AK013218|Wnt5b|22419|wingless-related MMTV integration site 5B	NM_009525|Wnt5b|22419|wingless-related MMTV integration site 5B
mm9_v1_chr9_+_108250153_108250277	0.512058	HIF1A.p2	NM_011678|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK169372|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK169933|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK171271|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	L00681|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK149964|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK220512|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK171633|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK138838|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK143582|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	BC011341|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	BC066180|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	BC066865|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)
mm9_v1_chr10_+_50312445_50312544	0.511027	HIF1A.p2	AK144867|Ascc3|77987|activating signal cointegrator 1 complex subunit 3	NM_001146089|Ascc3|77987|activating signal cointegrator 1 complex subunit 3	NM_198007|Ascc3|77987|activating signal cointegrator 1 complex subunit 3	AK052745|Ascc3|77987|activating signal cointegrator 1 complex subunit 3
mm9_v1_chr2_-_27282344_27282431	0.511001	HIF1A.p2	NM_009500|Vav2|22325|vav 2 oncogene	U37017|Vav2|22325|vav 2 oncogene	BC053060|Vav2|22325|vav 2 oncogene
mm9_v1_chr18_+_24762433_24762495	0.510122	HIF1A.p2	AK050960|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK147826|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK168370|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	NM_021448|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK033246|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK034457|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK167725|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK167853|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	BC015284|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	BC051943|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AK044699|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)	AF291064|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)
mm9_v1_chr7_-_72516109_72516162	0.509965	HIF1A.p2	D14340|Tjp1|21872|tight junction protein 1	NM_001163574|Tjp1|21872|tight junction protein 1	NM_009386|Tjp1|21872|tight junction protein 1
mm9_v1_chr15_+_81416643_81416789	0.508013	HIF1A.p2	NM_177821|Ep300|328572|E1A binding protein p300	AK042627|Ep300|328572|E1A binding protein p300	BC144976|Ep300|328572|E1A binding protein p300	BC150681|Ep300|328572|E1A binding protein p300
mm9_v1_chr14_-_71166340_71166465	0.507972	HIF1A.p2	AJ297360|Xpo7|65246|exportin 7	AK041768|Xpo7|65246|exportin 7	AK051105|Xpo7|65246|exportin 7	AK035775|Xpo7|65246|exportin 7	BC029702|Xpo7|65246|exportin 7	AK164595|Xpo7|65246|exportin 7	NM_023045|Xpo7|65246|exportin 7
mm9_v1_chr7_-_30875415_30875528	0.507698	HIF1A.p2	BC019790|Zfp566|72556|zinc finger protein 566	AK012367|Zfp566|72556|zinc finger protein 566	NM_152814|Zfp566|72556|zinc finger protein 566
mm9_v1_chr6_-_29162165_29162199	0.507161	HIF1A.p2	U00978|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1
mm9_v1_chr3_+_88101146_88101153	0.506579	HIF1A.p2	
mm9_v1_chr2_+_28323580_28323619	0.504963	HIF1A.p2	AK051184|Mrps2|118451|mitochondrial ribosomal protein S2	AK172120|Mrps2|118451|mitochondrial ribosomal protein S2	NM_001166031|Mrps2|118451|mitochondrial ribosomal protein S2	NM_080452|Mrps2|118451|mitochondrial ribosomal protein S2	AK154131|Mrps2|118451|mitochondrial ribosomal protein S2	AB055389|Mrps2|118451|mitochondrial ribosomal protein S2	AK160129|Mrps2|118451|mitochondrial ribosomal protein S2	AK165956|Mrps2|118451|mitochondrial ribosomal protein S2	AK156412|Mrps2|118451|mitochondrial ribosomal protein S2	AK171699|Mrps2|118451|mitochondrial ribosomal protein S2	AK172432|Mrps2|118451|mitochondrial ribosomal protein S2	BC048377|Mrps2|118451|mitochondrial ribosomal protein S2	BC033460|Mrps2|118451|mitochondrial ribosomal protein S2	BC060503|Mrps2|118451|mitochondrial ribosomal protein S2
mm9_v1_chr7_-_52689833_52689978	0.501218	HIF1A.p2	AK159112|Ruvbl2|20174|RuvB-like protein 2	NM_011304|Ruvbl2|20174|RuvB-like protein 2
mm9_v1_chr19_-_6984541_6984611	0.501159	HIF1A.p2	AK009858|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr7_+_127245860_127245969	0.501146	HIF1A.p2	AK080630|Tmem159|233806|transmembrane protein 159	AK078811|Tmem159|233806|transmembrane protein 159	AK167192|Tmem159|233806|transmembrane protein 159	AK142240|Tmem159|233806|transmembrane protein 159	AK150434|Tmem159|233806|transmembrane protein 159	AK087074|Tmem159|233806|transmembrane protein 159	AK158048|Tmem159|233806|transmembrane protein 159	AK158249|Tmem159|233806|transmembrane protein 159	AK158250|Tmem159|233806|transmembrane protein 159	BC006689|Tmem159|233806|transmembrane protein 159	NM_145586|Tmem159|233806|transmembrane protein 159	AK171378|Tmem159|233806|transmembrane protein 159
mm9_v1_chr2_-_52601140_52601264	0.49974	HIF1A.p2	AK214650|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK004604|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	NM_019667|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AB012611|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK044230|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK159699|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK017668|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK078244|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK168729|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC013818|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ141211|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK035789|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
mm9_v1_chr3_+_67386633_67386754	0.49859	HIF1A.p2	AK075859|Mfsd1|66868|major facilitator superfamily domain containing 1	AK159554|Mfsd1|66868|major facilitator superfamily domain containing 1	AK152444|Mfsd1|66868|major facilitator superfamily domain containing 1	AK135235|Mfsd1|66868|major facilitator superfamily domain containing 1	NM_025813|Mfsd1|66868|major facilitator superfamily domain containing 1	AK004586|Mfsd1|66868|major facilitator superfamily domain containing 1	AK136108|Mfsd1|66868|major facilitator superfamily domain containing 1	AK166645|Mfsd1|66868|major facilitator superfamily domain containing 1	BC024891|Mfsd1|66868|major facilitator superfamily domain containing 1	AK032688|Mfsd1|66868|major facilitator superfamily domain containing 1
mm9_v1_chr3_-_129534032_129534091	0.498374	HIF1A.p2	AK075923|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	AK167001|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	AK021256|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)
mm9_v1_chr8_-_126544907_126544994	0.497035	HIF1A.p2	AK033477|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
mm9_v1_chr17_-_56175896_56176097	0.495948	HIF1A.p2	AK162715|Sh3gl1|20405|SH3-domain GRB2-like 1	BC138602|Sh3gl1|20405|SH3-domain GRB2-like 1	BC138603|Sh3gl1|20405|SH3-domain GRB2-like 1	BC145345|Sh3gl1|20405|SH3-domain GRB2-like 1	NM_013664|Sh3gl1|20405|SH3-domain GRB2-like 1	U58885|Sh3gl1|20405|SH3-domain GRB2-like 1	AK167505|Sh3gl1|20405|SH3-domain GRB2-like 1	AK154836|Sh3gl1|20405|SH3-domain GRB2-like 1
mm9_v1_chr11_+_3189157_3189283	0.495133	HIF1A.p2	AK018372|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	BC055947|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr5_+_145529646_145529663	0.4945	HIF1A.p2	NM_001081362|Trrap|100683|transformation/transcription domain-associated protein	AK147241|Trrap|100683|transformation/transcription domain-associated protein
mm9_v1_chr5_-_139936486_139936511	0.494344	HIF1A.p2	NM_028469|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene
mm9_v1_chrX_-_72661900_72661926	0.494188	HIF1A.p2	AK142198|Mtcp1|17763|mature T-cell proliferation 1	AK140533|Mtcp1|17763|mature T-cell proliferation 1
mm9_v1_chr14_-_119105340_119105428	0.4928	HIF1A.p2	BC150822|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	BC171974|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AK157723|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm9_v1_chr10_-_80729645_80729680	0.489621	HIF1A.p2	AK009657|Mrpl54|66047|mitochondrial ribosomal protein L54	BC056985|Mrpl54|66047|mitochondrial ribosomal protein L54	AK002348|Mrpl54|66047|mitochondrial ribosomal protein L54	AK003225|Mrpl54|66047|mitochondrial ribosomal protein L54	NM_025317|Mrpl54|66047|mitochondrial ribosomal protein L54
mm9_v1_chr17_+_14416508_14416565	0.489424	HIF1A.p2	NM_022315|Smoc2|64074|SPARC related modular calcium binding 2	AJ249901|Smoc2|64074|SPARC related modular calcium binding 2	AK030958|Smoc2|64074|SPARC related modular calcium binding 2	AK159749|Smoc2|64074|SPARC related modular calcium binding 2	AK160002|Smoc2|64074|SPARC related modular calcium binding 2	AK172312|Smoc2|64074|SPARC related modular calcium binding 2	AK040109|Smoc2|64074|SPARC related modular calcium binding 2	BC019527|Smoc2|64074|SPARC related modular calcium binding 2
mm9_v1_chr10_-_75905593_75905656	0.488832	HIF1A.p2	NM_008787|Pcnt|18541|pericentrin (kendrin)
mm9_v1_chr6_-_70741991_70742200	0.488813	HIF1A.p2	BC053526|Rpia|19895|ribose 5-phosphate isomerase A	AK137235|Rpia|19895|ribose 5-phosphate isomerase A	L35034|Rpia|19895|ribose 5-phosphate isomerase A	NM_009075|Rpia|19895|ribose 5-phosphate isomerase A
mm9_v1_chr14_-_31832274_31832280	0.488193	HIF1A.p2	NM_153547|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK167094|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)
mm9_v1_chr2_-_103601232_103601426	0.487262	HIF1A.p2	AK149825|Nat10|98956|N-acetyltransferase 10	AK036294|Nat10|98956|N-acetyltransferase 10	AK048552|Nat10|98956|N-acetyltransferase 10	AK040070|Nat10|98956|N-acetyltransferase 10	AK087445|Nat10|98956|N-acetyltransferase 10	BC034516|Nat10|98956|N-acetyltransferase 10	NM_153126|Nat10|98956|N-acetyltransferase 10	AK142682|Nat10|98956|N-acetyltransferase 10	AK054029|Nat10|98956|N-acetyltransferase 10
mm9_v1_chr2_+_120966144_120966210	0.487107	HIF1A.p2	AK048809|Adal|75894|adenosine deaminase-like	AK016299|Adal|75894|adenosine deaminase-like	AK049697|Adal|75894|adenosine deaminase-like	AK039677|Adal|75894|adenosine deaminase-like	AK044025|Adal|75894|adenosine deaminase-like
mm9_v1_chr5_+_32761426_32761470	0.486791	HIF1A.p2	AK166168|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166623|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168141|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr12_+_86114195_86114258	0.486388	HIF1A.p2	AK002936|Isca2|74316|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)	NM_028863|Isca2|74316|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)	BC022589|Isca2|74316|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)	AK019988|Isca2|74316|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)
mm9_v1_chr3_+_94641626_94641643	0.484642	HIF1A.p2	BC085188|Pogz|229584|pogo transposable element with ZNF domain	AK035255|Pogz|229584|pogo transposable element with ZNF domain	AK086062|Pogz|229584|pogo transposable element with ZNF domain	AK161889|Pogz|229584|pogo transposable element with ZNF domain	BC139432|Pogz|229584|pogo transposable element with ZNF domain	BC139433|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr4_-_129318264_129318285	0.484322	HIF1A.p2	AK150240|Txlna|109658|taxilin alpha	AK161649|Txlna|109658|taxilin alpha	AK171101|Txlna|109658|taxilin alpha	AK078192|Txlna|109658|taxilin alpha
mm9_v1_chr14_+_70167278_70167338	0.483406	HIF1A.p2	AK050753|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	NM_020275|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK080069|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK145730|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK154993|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	BC065141|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AB031081|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b
mm9_v1_chr2_-_105239368_105239475	0.483045	HIF1A.p2	BC049108|Rcn1|19672|reticulocalbin 1	AK159973|Rcn1|19672|reticulocalbin 1	AK017494|Rcn1|19672|reticulocalbin 1	D13003|Rcn1|19672|reticulocalbin 1	AK133971|Rcn1|19672|reticulocalbin 1	NM_009037|Rcn1|19672|reticulocalbin 1
mm9_v1_chr13_+_34254902_34254947	0.482894	HIF1A.p2	AK009887|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4
mm9_v1_chr1_-_75139207_75139284	0.482824	HIF1A.p2	AK169779|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK145962|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr10_+_69559860_69560052	0.481652	HIF1A.p2	NM_001111121|Ccdc6|76551|coiled-coil domain containing 6
mm9_v1_chr12_-_114180283_114180368	0.48141	HIF1A.p2	AK013174|Nudt14|66174|nudix (nucleoside diphosphate linked moiety X)-type motif 14	BC025444|Nudt14|66174|nudix (nucleoside diphosphate linked moiety X)-type motif 14	NM_025399|Nudt14|66174|nudix (nucleoside diphosphate linked moiety X)-type motif 14	AK003991|Nudt14|66174|nudix (nucleoside diphosphate linked moiety X)-type motif 14
mm9_v1_chr15_-_57723993_57724037	0.480922	HIF1A.p2	AK011499|Derl1|67819|Der1-like domain family, member 1	AK161702|Derl1|67819|Der1-like domain family, member 1	BC003454|Derl1|67819|Der1-like domain family, member 1	BC085490|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr9_-_56008770_56008818	0.480663	HIF1A.p2	AK159914|Tspan3|56434|tetraspanin 3
mm9_v1_chr9_-_20896404_20896431	0.480261	HIF1A.p2	BC108392|Raver1|71766|ribonucleoprotein, PTB-binding 1	BC058271|Raver1|71766|ribonucleoprotein, PTB-binding 1	NM_027911|Raver1|71766|ribonucleoprotein, PTB-binding 1
mm9_v1_chr7_-_4610551_4610664	0.479712	HIF1A.p2	BC053076|Ppp6r1|243819|protein phosphatase 6, regulatory subunit 1	NM_172894|Ppp6r1|243819|protein phosphatase 6, regulatory subunit 1	AK080891|Ppp6r1|243819|protein phosphatase 6, regulatory subunit 1
mm9_v1_chr11_+_80022587_80022605	0.479376	HIF1A.p2	AK169811|Rhot1|59040|ras homolog gene family, member T1	AK021245|Rhot1|59040|ras homolog gene family, member T1	AK019059|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr1_-_51535232_51535262	0.478912	HIF1A.p2	AK167541|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK167652|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK028886|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK031015|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK042351|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK049396|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK051607|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK077226|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK077767|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK079434|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK083915|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK163613|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK166300|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AY880264|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	NM_028696|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK076824|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A
mm9_v1_chr10_+_82323249_82323266	0.478533	HIF1A.p2	AK172383|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr2_-_31939210_31939226	0.478376	HIF1A.p2	AK079514|Fam78a|241303|family with sequence similarity 78, member A	NM_175511|Fam78a|241303|family with sequence similarity 78, member A	AK077626|Fam78a|241303|family with sequence similarity 78, member A
mm9_v1_chr4_-_132478424_132478474	0.477941	HIF1A.p2	BC008163|Fam76a|230789|family with sequence similarity 76, member A	AK154575|Fam76a|230789|family with sequence similarity 76, member A	NM_001163792|Fam76a|230789|family with sequence similarity 76, member A	NM_145553|Fam76a|230789|family with sequence similarity 76, member A	AK038831|Fam76a|230789|family with sequence similarity 76, member A
mm9_v1_chr2_+_91366928_91366961	0.4769	HIF1A.p2	AK015282|Ckap5|75786|cytoskeleton associated protein 5
mm9_v1_chr7_+_117265568_117265624	0.475263	HIF1A.p2	NM_009516|Wee1|22390|WEE 1 homolog 1 (S. pombe)	BC006852|Wee1|22390|WEE 1 homolog 1 (S. pombe)	D30743|Wee1|22390|WEE 1 homolog 1 (S. pombe)
mm9_v1_chr8_-_11635748_11635782	0.47523	HIF1A.p2	AK031808|Ankrd10|102334|ankyrin repeat domain 10	AK033623|Ankrd10|102334|ankyrin repeat domain 10	AK038156|Ankrd10|102334|ankyrin repeat domain 10	AK042500|Ankrd10|102334|ankyrin repeat domain 10	AK081754|Ankrd10|102334|ankyrin repeat domain 10	AK082875|Ankrd10|102334|ankyrin repeat domain 10	AK084456|Ankrd10|102334|ankyrin repeat domain 10	AK143253|Ankrd10|102334|ankyrin repeat domain 10	NM_001167967|Ankrd10|102334|ankyrin repeat domain 10	NM_133971|Ankrd10|102334|ankyrin repeat domain 10	AK050983|Ankrd10|102334|ankyrin repeat domain 10
mm9_v1_chr5_+_109123159_109123286	0.475021	HIF1A.p2	NM_001164259|Fgfrl1|116701|fibroblast growth factor receptor-like 1	NM_054071|Fgfrl1|116701|fibroblast growth factor receptor-like 1	AF321301|Fgfrl1|116701|fibroblast growth factor receptor-like 1
mm9_v1_chr7_-_30954705_30954770	0.474774	HIF1A.p2	AJ224763|Zfp146|26465|zinc finger protein 146	AK047696|Zfp146|26465|zinc finger protein 146	NM_011980|Zfp146|26465|zinc finger protein 146	AK037311|Zfp146|26465|zinc finger protein 146
mm9_v1_chr19_-_44144244_44144286	0.473459	HIF1A.p2	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr6_+_116288075_116288140	0.473019	HIF1A.p2	BC053090|March8|71779|membrane-associated ring finger (C3HC4) 8	NM_027920|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr11_-_84326869_84327030	0.472641	HIF1A.p2	AY306199|Aatf|56321|apoptosis antagonizing transcription factor	BC025080|Aatf|56321|apoptosis antagonizing transcription factor	AK141334|Aatf|56321|apoptosis antagonizing transcription factor	AF222801|Aatf|56321|apoptosis antagonizing transcription factor	NM_019816|Aatf|56321|apoptosis antagonizing transcription factor	AK077789|Aatf|56321|apoptosis antagonizing transcription factor
mm9_v1_chr19_+_7492081_7492131	0.472239	HIF1A.p2	NM_175381|2700081O15Rik|108899|RIKEN cDNA 2700081O15 gene
mm9_v1_chr2_+_155343767_155343780	0.472158	HIF1A.p2	BC051432|Acss2|60525|acyl-CoA synthetase short-chain family member 2	NM_019811|Acss2|60525|acyl-CoA synthetase short-chain family member 2
mm9_v1_chr10_+_85484933_85484965	0.471491	HIF1A.p2	AK150190|Fbxo7|69754|F-box protein 7	AK147907|Fbxo7|69754|F-box protein 7
mm9_v1_chr11_+_80022584_80022586	0.471362	HIF1A.p2	AK032096|Rhot1|59040|ras homolog gene family, member T1	AK054472|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr17_-_10512217_10512250	0.470809	HIF1A.p2	AK132303|Qk|19317|quaking	NM_001159516|Qk|19317|quaking	NM_001159517|Qk|19317|quaking	NM_021881|Qk|19317|quaking	U44940|Qk|19317|quaking
mm9_v1_chr2_+_17986187_17986431	0.469621	HIF1A.p2	AK154320|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC055298|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK147388|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC069988|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AF010135|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK220504|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK045042|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr14_+_22318991_22319040	0.467577	HIF1A.p2	AK147509|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4
mm9_v1_chr18_-_16966954_16967033	0.466988	HIF1A.p2	AK087418|Cdh2|12558|cadherin 2	BC022107|Cdh2|12558|cadherin 2	AK032826|Cdh2|12558|cadherin 2
mm9_v1_chr1_-_187153212_187153265	0.466933	HIF1A.p2	AK164435|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK051778|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK088965|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK036182|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK008042|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK043729|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	BC052403|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK050358|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK166832|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial
mm9_v1_chr11_-_84729844_84729889	0.466583	HIF1A.p2	BC089554|Znhit3|448850|zinc finger, HIT type 3	AK002888|Znhit3|448850|zinc finger, HIT type 3	AK003721|Znhit3|448850|zinc finger, HIT type 3	AK004259|Znhit3|448850|zinc finger, HIT type 3	NM_001005223|Znhit3|448850|zinc finger, HIT type 3	AK014350|Znhit3|448850|zinc finger, HIT type 3
mm9_v1_chr19_-_41922577_41922621	0.466517	HIF1A.p2	BC034214|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2	BC085510|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2	AK081171|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2	NM_177603|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2
mm9_v1_chr8_+_73223681_73223719	0.464944	HIF1A.p2	AK196038|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr14_+_121310342_121310481	0.464623	HIF1A.p2	AK161668|Ipo5|70572|importin 5	NM_023579|Ipo5|70572|importin 5	AK079134|Ipo5|70572|importin 5	AK049422|Ipo5|70572|importin 5	AK169664|Ipo5|70572|importin 5	AK053681|Ipo5|70572|importin 5	AK017701|Ipo5|70572|importin 5	AK167303|Ipo5|70572|importin 5	AF294327|Ipo5|70572|importin 5	BC052392|Ipo5|70572|importin 5
mm9_v1_chr7_+_71432538_71432641	0.464513	HIF1A.p2	AK088715|Mtmr10|233315|myotubularin related protein 10	NM_172742|Mtmr10|233315|myotubularin related protein 10	BC041672|Mtmr10|233315|myotubularin related protein 10
mm9_v1_chr9_+_57556346_57556409	0.463689	HIF1A.p2	AK146804|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	AK140127|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	AK168118|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	AK090005|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	AK166286|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	NM_153799|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	BC031725|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	BC033484|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)
mm9_v1_chr14_-_45938236_45938274	0.463258	HIF1A.p2	AK142595|Ero1l|50527|ERO1-like (S. cerevisiae)
mm9_v1_chr9_-_110556645_110556664	0.457972	HIF1A.p2	BC157956|Nbeal2|235627|neurobeachin-like 2	BC172118|Nbeal2|235627|neurobeachin-like 2	NM_183276|Nbeal2|235627|neurobeachin-like 2
mm9_v1_chr19_-_44144175_44144240	0.454023	HIF1A.p2	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr2_+_91551067_91551117	0.453956	HIF1A.p2	AK147045|Harbi1|241547|harbinger transposase derived 1	AK084226|Harbi1|241547|harbinger transposase derived 1	AK080671|Harbi1|241547|harbinger transposase derived 1	BC094315|Harbi1|241547|harbinger transposase derived 1	NM_178724|Harbi1|241547|harbinger transposase derived 1	AK045343|Harbi1|241547|harbinger transposase derived 1
mm9_v1_chr2_-_25066706_25067008	0.45315	HIF1A.p2	AK087524|Cobra1|58202|cofactor of BRCA1	AK080419|Cobra1|58202|cofactor of BRCA1	AK214490|Cobra1|58202|cofactor of BRCA1	BC004762|Cobra1|58202|cofactor of BRCA1	AB041607|Cobra1|58202|cofactor of BRCA1	AK046129|Cobra1|58202|cofactor of BRCA1	NM_021393|Cobra1|58202|cofactor of BRCA1
mm9_v1_chr2_+_130953108_130953187	0.45271	HIF1A.p2	BC011103|Hspa12b|72630|heat shock protein 12B	NM_028306|Hspa12b|72630|heat shock protein 12B	AK012548|Hspa12b|72630|heat shock protein 12B
mm9_v1_chr11_-_116704485_116704688	0.45166	HIF1A.p2	EF527405|Jmjd6|107817|jumonji domain containing 6	BC006067|Jmjd6|107817|jumonji domain containing 6	BC011503|Jmjd6|107817|jumonji domain containing 6	AK122317|Jmjd6|107817|jumonji domain containing 6	AF304118|Jmjd6|107817|jumonji domain containing 6
mm9_v1_chr17_+_28828286_28828455	0.44921	HIF1A.p2	BC012235|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168508|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168514|Mapk14|26416|mitogen-activated protein kinase 14	NM_011951|Mapk14|26416|mitogen-activated protein kinase 14	BC085303|Mapk14|26416|mitogen-activated protein kinase 14	AK089059|Mapk14|26416|mitogen-activated protein kinase 14	AK133684|Mapk14|26416|mitogen-activated protein kinase 14	AF128892|Mapk14|26416|mitogen-activated protein kinase 14	BC018227|Mapk14|26416|mitogen-activated protein kinase 14	U10871|Mapk14|26416|mitogen-activated protein kinase 14	D83073|Mapk14|26416|mitogen-activated protein kinase 14
mm9_v1_chr16_-_38550174_38550326	0.448121	HIF1A.p2	AK197458|Poglut1|224143|protein O-glucosyltransferase 1	AK215456|Poglut1|224143|protein O-glucosyltransferase 1	AK216766|Poglut1|224143|protein O-glucosyltransferase 1	AK036224|Poglut1|224143|protein O-glucosyltransferase 1	NM_172380|Poglut1|224143|protein O-glucosyltransferase 1	AK031608|Poglut1|224143|protein O-glucosyltransferase 1	AK041321|Poglut1|224143|protein O-glucosyltransferase 1	AK045278|Poglut1|224143|protein O-glucosyltransferase 1	AK035948|Poglut1|224143|protein O-glucosyltransferase 1	BC026809|Poglut1|224143|protein O-glucosyltransferase 1	AK082556|Poglut1|224143|protein O-glucosyltransferase 1	AK167641|Poglut1|224143|protein O-glucosyltransferase 1	AK079886|Poglut1|224143|protein O-glucosyltransferase 1
mm9_v1_chr19_+_10092665_10092824	0.447868	HIF1A.p2	NM_144538|Rab3il1|74760|RAB3A interacting protein (rabin3)-like 1	AK004767|Rab3il1|74760|RAB3A interacting protein (rabin3)-like 1	BC020147|Rab3il1|74760|RAB3A interacting protein (rabin3)-like 1
mm9_v1_chr10_-_79896330_79896385	0.447861	HIF1A.p2	BC006860|Tcf3|21423|transcription factor 3	AK017617|Tcf3|21423|transcription factor 3	AK156265|Tcf3|21423|transcription factor 3	AK034777|Tcf3|21423|transcription factor 3	AK161009|Tcf3|21423|transcription factor 3	AK038738|Tcf3|21423|transcription factor 3
mm9_v1_chr6_+_17643923_17644228	0.447717	HIF1A.p2	BC024652|St7|64213|suppression of tumorigenicity 7	AY007792|St7|64213|suppression of tumorigenicity 7	AY007793|St7|64213|suppression of tumorigenicity 7
mm9_v1_chr2_+_120996896_120997011	0.447615	HIF1A.p2	NM_153387|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK038921|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK152984|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK153171|Tubgcp4|51885|tubulin, gamma complex associated protein 4	BC029106|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK051517|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK045305|Tubgcp4|51885|tubulin, gamma complex associated protein 4
mm9_v1_chr2_-_52280154_52280300	0.447082	HIF1A.p2	
mm9_v1_chr11_-_88579392_88579430	0.4465	HIF1A.p2	AK051269|Msi2|76626|Musashi homolog 2 (Drosophila)	AK031365|Msi2|76626|Musashi homolog 2 (Drosophila)	AK153928|Msi2|76626|Musashi homolog 2 (Drosophila)	AK169846|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr1_-_33871349_33871443	0.444966	HIF1A.p2	AK015797|Zfp451|98403|zinc finger protein 451
mm9_v1_chr11_-_96805294_96805332	0.444857	HIF1A.p2	BC026564|Pnpo|103711|pyridoxine 5'-phosphate oxidase	AK164667|Pnpo|103711|pyridoxine 5'-phosphate oxidase	NM_134021|Pnpo|103711|pyridoxine 5'-phosphate oxidase
mm9_v1_chr19_-_24105498_24105512	0.443609	HIF1A.p2	NM_001114174|Fam189a2|381217|family with sequence similarity 189, member A2
mm9_v1_chr9_-_108469265_108469296	0.443154	HIF1A.p2	AK005252|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3	AK014634|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
mm9_v1_chr2_+_127953310_127953338	0.441377	HIF1A.p2	BC058175|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)
mm9_v1_chr7_-_129276357_129276498	0.441321	HIF1A.p2	BC066140|Palb2|233826|partner and localizer of BRCA2	AK156701|Palb2|233826|partner and localizer of BRCA2	AK157382|Palb2|233826|partner and localizer of BRCA2	BC066139|Palb2|233826|partner and localizer of BRCA2	BC055302|Palb2|233826|partner and localizer of BRCA2	AK154227|Palb2|233826|partner and localizer of BRCA2	AK028653|Palb2|233826|partner and localizer of BRCA2	NM_001081238|Palb2|233826|partner and localizer of BRCA2
mm9_v1_chr15_-_96473193_96473343	0.441274	HIF1A.p2	AK162612|Slc38a1|105727|solute carrier family 38, member 1	AK081724|Slc38a1|105727|solute carrier family 38, member 1	NM_001166458|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr2_+_32426415_32426445	0.440456	HIF1A.p2	
mm9_v1_chr6_+_35127603_35127646	0.440159	HIF1A.p2	AK014419|Nup205|70699|nucleoporin 205	NM_027513|Nup205|70699|nucleoporin 205	AK087717|Nup205|70699|nucleoporin 205	AK148473|Nup205|70699|nucleoporin 205	BC058729|Nup205|70699|nucleoporin 205
mm9_v1_chr2_+_57090707_57090899	0.439398	HIF1A.p2	BC021359|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	NM_010274|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	AK167152|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	U60987|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	AK034353|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	AK151189|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	D50430|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial
mm9_v1_chr5_+_66155358_66155411	0.439183	HIF1A.p2	AK173167|N4bp2|333789|NEDD4 binding protein 2
mm9_v1_chr11_-_60692261_60692327	0.436979	HIF1A.p2	BC048514|Tmem11|216821|transmembrane protein 11
mm9_v1_chr3_+_28680248_28680315	0.436111	HIF1A.p2	AK052412|Eif5a2|208691|eukaryotic translation initiation factor 5A2	BC106843|Eif5a2|208691|eukaryotic translation initiation factor 5A2	BC106844|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AK082214|Eif5a2|208691|eukaryotic translation initiation factor 5A2
mm9_v1_chr14_-_34260308_34260313	0.436031	HIF1A.p2	BC053027|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr11_+_74739357_74739420	0.435139	HIF1A.p2	BC047279|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC066040|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001002764|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC077715|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC016550|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr13_-_96145269_96145292	0.43383	HIF1A.p2	AK017248|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008168|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008174|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008399|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AY500995|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	BC052410|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	NM_025630|Aggf1|66549|angiogenic factor with G patch and FHA domains 1
mm9_v1_chr11_+_53164267_53164268	0.432145	HIF1A.p2	NM_033565|Aff4|93736|AF4/FMR2 family, member 4
mm9_v1_chr19_-_21727272_21727305	0.432075	HIF1A.p2	BC023385|1110059E24Rik|66206|RIKEN cDNA 1110059E24 gene	AK004308|1110059E24Rik|66206|RIKEN cDNA 1110059E24 gene	NM_025423|1110059E24Rik|66206|RIKEN cDNA 1110059E24 gene
mm9_v1_chr4_+_136833403_136833549	0.431997	HIF1A.p2	AK012727|Wnt4|22417|wingless-related MMTV integration site 4	BC101962|Wnt4|22417|wingless-related MMTV integration site 4	BC103560|Wnt4|22417|wingless-related MMTV integration site 4	BC103561|Wnt4|22417|wingless-related MMTV integration site 4	BC103562|Wnt4|22417|wingless-related MMTV integration site 4	M89797|Wnt4|22417|wingless-related MMTV integration site 4	NM_009523|Wnt4|22417|wingless-related MMTV integration site 4
mm9_v1_chr16_+_57549340_57549381	0.431964	HIF1A.p2	AK019472|Filip1l|78749|filamin A interacting protein 1-like	NM_001177871|Filip1l|78749|filamin A interacting protein 1-like	AK132319|Filip1l|78749|filamin A interacting protein 1-like	BC024523|Filip1l|78749|filamin A interacting protein 1-like	BC062166|Filip1l|78749|filamin A interacting protein 1-like
mm9_v1_chr13_-_9764195_9764212	0.431539	HIF1A.p2	BC058999|Zmynd11|66505|zinc finger, MYND domain containing 11
mm9_v1_chr13_-_18085124_18085192	0.430696	HIF1A.p2	AK019184|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK076034|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	BC083111|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK011805|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK011852|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	BC020123|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK030455|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK151981|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	BC037189|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	BC048453|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK005425|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK011774|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	NM_025904|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene
mm9_v1_chr6_-_71858736_71858760	0.430669	HIF1A.p2	AK032831|Ptcd3|69956|pentatricopeptide repeat domain 3	AK011665|Ptcd3|69956|pentatricopeptide repeat domain 3	AK146005|Ptcd3|69956|pentatricopeptide repeat domain 3	AK172480|Ptcd3|69956|pentatricopeptide repeat domain 3	BC115434|Ptcd3|69956|pentatricopeptide repeat domain 3	AK146172|Ptcd3|69956|pentatricopeptide repeat domain 3	NM_027275|Ptcd3|69956|pentatricopeptide repeat domain 3
mm9_v1_chr8_-_8660610_8660772	0.430032	HIF1A.p2	U30244|Efnb2|13642|ephrin B2	CT010381|Efnb2|13642|ephrin B2	U16819|Efnb2|13642|ephrin B2	L38847|Efnb2|13642|ephrin B2	NM_010111|Efnb2|13642|ephrin B2
mm9_v1_chr11_-_72303293_72303434	0.42982	HIF1A.p2	AB441166|Spns2|216892|spinster homolog 2 (Drosophila)	NM_153060|Spns2|216892|spinster homolog 2 (Drosophila)	BC011467|Spns2|216892|spinster homolog 2 (Drosophila)
mm9_v1_chr7_-_127345462_127345501	0.429412	HIF1A.p2	BC045159|Crym|12971|crystallin, mu	AK138422|Crym|12971|crystallin, mu	AK163781|Crym|12971|crystallin, mu	AK143116|Crym|12971|crystallin, mu	AK163801|Crym|12971|crystallin, mu	AF039391|Crym|12971|crystallin, mu	NM_016669|Crym|12971|crystallin, mu
mm9_v1_chr4_-_123341990_123342070	0.429043	HIF1A.p2	AK143540|Macf1|11426|microtubule-actin crosslinking factor 1
mm9_v1_chr2_-_68309996_68310080	0.428995	HIF1A.p2	AK017292|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	AF099988|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	BC064443|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	NM_016866|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	AK148456|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)
mm9_v1_chr5_-_31210160_31210170	0.428116	HIF1A.p2	NM_024460|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chr1_-_164478628_164478690	0.426921	HIF1A.p2	AK173044|Mettl13|71449|methyltransferase like 13	AK084750|Mettl13|71449|methyltransferase like 13	AK048636|Mettl13|71449|methyltransferase like 13	AK017470|Mettl13|71449|methyltransferase like 13	AK162843|Mettl13|71449|methyltransferase like 13	AK050492|Mettl13|71449|methyltransferase like 13	AK146751|Mettl13|71449|methyltransferase like 13	AK169319|Mettl13|71449|methyltransferase like 13	AK168959|Mettl13|71449|methyltransferase like 13
mm9_v1_chr17_+_46339730_46339822	0.426316	HIF1A.p2	BC092371|Xpo5|72322|exportin 5	BC055455|Xpo5|72322|exportin 5	AK010389|Xpo5|72322|exportin 5	AF343581|Xpo5|72322|exportin 5	NM_028198|Xpo5|72322|exportin 5	BC131660|Xpo5|72322|exportin 5	BC131661|Xpo5|72322|exportin 5
mm9_v1_chr18_-_24762299_24762341	0.42542	HIF1A.p2	NM_139143|Slc39a6|106957|solute carrier family 39 (metal ion transporter), member 6
mm9_v1_chr4_-_106925932_106925954	0.425264	HIF1A.p2	AK020847|Lrrc42|77809|leucine rich repeat containing 42
mm9_v1_chr9_+_77765170_77765271	0.422599	HIF1A.p2	AK031743|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK162451|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	NM_134255|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK051580|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK045274|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK085663|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK085696|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK028761|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK167755|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK168360|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK088153|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK168987|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	BC022911|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm9_v1_chr3_-_144233110_144233181	0.421611	HIF1A.p2	AK165112|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	AK088698|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	NM_011828|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr19_+_56471731_56471767	0.420726	HIF1A.p2	AK154978|Casp7|12369|caspase 7	BC005428|Casp7|12369|caspase 7	D86353|Casp7|12369|caspase 7
mm9_v1_chr16_+_17797405_17797532	0.419078	HIF1A.p2	AB024432|Scarf2|224024|scavenger receptor class F, member 2	AK142378|Scarf2|224024|scavenger receptor class F, member 2	BC139758|Scarf2|224024|scavenger receptor class F, member 2	BC059226|Scarf2|224024|scavenger receptor class F, member 2	BC060084|Scarf2|224024|scavenger receptor class F, member 2	AK143208|Scarf2|224024|scavenger receptor class F, member 2
mm9_v1_chr4_-_124370770_124370859	0.418377	HIF1A.p2	BC043139|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK012550|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	NM_026031|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK147113|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	BC061074|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK145266|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr2_-_12932442_12932490	0.418316	HIF1A.p2	EU399230|C1ql3|227580|C1q-like 3	BC024634|C1ql3|227580|C1q-like 3	NM_153155|C1ql3|227580|C1q-like 3
mm9_v1_chr13_+_50513207_50513274	0.415837	HIF1A.p2	AK135553|Fbxw17|109082|F-box and WD-40 domain protein 17	BC040428|Fbxw17|109082|F-box and WD-40 domain protein 17	NM_175401|Fbxw17|109082|F-box and WD-40 domain protein 17	AK155157|Fbxw17|109082|F-box and WD-40 domain protein 17
mm9_v1_chr9_-_121668905_121669060	0.4149	HIF1A.p2	AK089135|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK080675|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK158237|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK162861|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK149318|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene
mm9_v1_chr11_-_96805259_96805283	0.413182	HIF1A.p2	BC010785|Pnpo|103711|pyridoxine 5'-phosphate oxidase	AK154004|Pnpo|103711|pyridoxine 5'-phosphate oxidase
mm9_v1_chr4_-_129317873_129317883	0.413011	HIF1A.p2	BC060227|Txlna|109658|taxilin alpha	BC065115|Txlna|109658|taxilin alpha	NM_001005506|Txlna|109658|taxilin alpha
mm9_v1_chr18_+_42435006_42435038	0.410914	HIF1A.p2	NM_172626|Rbm27|225432|RNA binding motif protein 27	AY461716|Rbm27|225432|RNA binding motif protein 27
mm9_v1_chr4_-_147462051_147462172	0.409701	HIF1A.p2	AF102548|Agtrap|11610|angiotensin II, type I receptor-associated protein	BC057196|Agtrap|11610|angiotensin II, type I receptor-associated protein	AK007502|Agtrap|11610|angiotensin II, type I receptor-associated protein	AK036598|Agtrap|11610|angiotensin II, type I receptor-associated protein	AK007383|Agtrap|11610|angiotensin II, type I receptor-associated protein	AK152467|Agtrap|11610|angiotensin II, type I receptor-associated protein	NM_009642|Agtrap|11610|angiotensin II, type I receptor-associated protein
mm9_v1_chr8_-_113783097_113783143	0.40956	HIF1A.p2	BC021306|Glg1|20340|golgi apparatus protein 1	NM_009149|Glg1|20340|golgi apparatus protein 1	X84037|Glg1|20340|golgi apparatus protein 1	AK154581|Glg1|20340|golgi apparatus protein 1
mm9_v1_chr13_-_12742377_12742693	0.408266	HIF1A.p2	AK190995|Gpr137b|83924|G protein-coupled receptor 137B	AK194643|Gpr137b|83924|G protein-coupled receptor 137B	AK198577|Gpr137b|83924|G protein-coupled receptor 137B	AK201617|Gpr137b|83924|G protein-coupled receptor 137B	AK204136|Gpr137b|83924|G protein-coupled receptor 137B	AK204647|Gpr137b|83924|G protein-coupled receptor 137B	AK195847|Gpr137b|83924|G protein-coupled receptor 137B	AK170650|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	BC093499|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AF154337|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK009736|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK170103|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK087190|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK171335|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK010724|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene
mm9_v1_chr9_+_75289299_75289376	0.407302	HIF1A.p2	BC082540|Leo1|235497|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	NM_001039522|Leo1|235497|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC083358|Leo1|235497|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK153933|Leo1|235497|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr2_+_162757228_162757280	0.404724	HIF1A.p2	NM_026499|Srsf6|67996|serine/arginine-rich splicing factor 6	AK004831|Srsf6|67996|serine/arginine-rich splicing factor 6	AK133872|Srsf6|67996|serine/arginine-rich splicing factor 6	AK171709|Srsf6|67996|serine/arginine-rich splicing factor 6	AK146293|Srsf6|67996|serine/arginine-rich splicing factor 6	AK159519|Srsf6|67996|serine/arginine-rich splicing factor 6	BC012039|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr18_-_42110847_42110895	0.404159	HIF1A.p2	BC119251|Prelid2|77619|PRELI domain containing 2	BC120711|Prelid2|77619|PRELI domain containing 2	BC145035|Prelid2|77619|PRELI domain containing 2	NM_029942|Prelid2|77619|PRELI domain containing 2	AK021193|Prelid2|77619|PRELI domain containing 2
mm9_v1_chr9_-_89599660_89599893	0.402914	HIF1A.p2	BC023338|Tmed3|66111|transmembrane emp24 domain containing 3	AK007544|Tmed3|66111|transmembrane emp24 domain containing 3	AK002698|Tmed3|66111|transmembrane emp24 domain containing 3	AK004545|Tmed3|66111|transmembrane emp24 domain containing 3	NM_025360|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chr13_+_63916547_63916676	0.402693	HIF1A.p2	AK082850|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	AK049874|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	NM_001013608|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	AK002307|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	NM_023507|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	AK035054|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene
mm9_v1_chr1_-_52557130_52557348	0.402657	HIF1A.p2	U47008|Nab1|17936|Ngfi-A binding protein 1	BC016886|Nab1|17936|Ngfi-A binding protein 1	BC005627|Nab1|17936|Ngfi-A binding protein 1	NM_008667|Nab1|17936|Ngfi-A binding protein 1
mm9_v1_chr14_+_22319075_22319102	0.399566	HIF1A.p2	AK052307|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4	NM_017479|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4	AF222800|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4
mm9_v1_chr17_-_48061577_48061752	0.398821	HIF1A.p2	BC057110|Foxp4|74123|forkhead box P4	NM_001110824|Foxp4|74123|forkhead box P4	NM_001110825|Foxp4|74123|forkhead box P4	NM_028767|Foxp4|74123|forkhead box P4
mm9_v1_chr11_-_72951771_72951795	0.398769	HIF1A.p2	BC113148|Gsg2|14841|germ cell-specific gene 2	AK138750|Gsg2|14841|germ cell-specific gene 2	D87326|Gsg2|14841|germ cell-specific gene 2	NM_010353|Gsg2|14841|germ cell-specific gene 2
mm9_v1_chr19_-_6532339_6532383	0.398303	HIF1A.p2	AK045662|Gm14964|100008567|predicted gene 14964
mm9_v1_chr6_-_91066809_91066837	0.39797	HIF1A.p2	AK157272|Nup210|54563|nucleoporin 210	BC052468|Nup210|54563|nucleoporin 210	AK053417|Nup210|54563|nucleoporin 210	NM_018815|Nup210|54563|nucleoporin 210
mm9_v1_chr8_-_23508931_23508966	0.397883	HIF1A.p2	AF133914|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	BC061143|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	AK145966|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	AK142223|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15
mm9_v1_chr16_-_78576914_78576958	0.396587	HIF1A.p2	AK044670|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed
mm9_v1_chr19_+_6984187_6984287	0.396017	HIF1A.p2	BC087959|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	NM_001166370|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	NM_026306|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	BC016191|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)
mm9_v1_chr2_+_68699498_68699613	0.395605	HIF1A.p2	AK081354|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK135798|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK151848|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK152417|Lass6|241447|LAG1 homolog, ceramide synthase 6	BC057629|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK028849|Lass6|241447|LAG1 homolog, ceramide synthase 6	NM_172856|Lass6|241447|LAG1 homolog, ceramide synthase 6
mm9_v1_chr8_-_90885848_90885909	0.394996	HIF1A.p2	AK160638|Brd7|26992|bromodomain containing 7
mm9_v1_chr5_+_104937363_104937405	0.394439	HIF1A.p2	AK164034|BC005561|100042165|cDNA sequence BC005561	NM_001166581|BC005561|100042165|cDNA sequence BC005561
mm9_v1_chr6_+_29383152_29383347	0.392208	HIF1A.p2	NM_001081185|Flnc|68794|filamin C, gamma	AK051985|Flnc|68794|filamin C, gamma	BC151097|Flnc|68794|filamin C, gamma	BC158128|Flnc|68794|filamin C, gamma	BC172159|Flnc|68794|filamin C, gamma
mm9_v1_chrX_+_34283626_34283705	0.392029	HIF1A.p2	BC147709|Slc25a43|194744|solute carrier family 25, member 43	BC147717|Slc25a43|194744|solute carrier family 25, member 43	BC172137|Slc25a43|194744|solute carrier family 25, member 43	NM_001085497|Slc25a43|194744|solute carrier family 25, member 43	AK153028|Slc25a43|194744|solute carrier family 25, member 43
mm9_v1_chr3_+_104442568_104442606	0.391279	HIF1A.p2	AK033516|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK079379|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK088762|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK161701|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK162682|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK166606|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	NM_009196|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	BC014777|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AF058055|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1
mm9_v1_chr7_-_91032695_91032850	0.39124	HIF1A.p2	AK162446|Mesdc1|80889|mesoderm development candidate 1	AK084510|Mesdc1|80889|mesoderm development candidate 1	AK089082|Mesdc1|80889|mesoderm development candidate 1	AK036338|Mesdc1|80889|mesoderm development candidate 1	NM_030705|Mesdc1|80889|mesoderm development candidate 1
mm9_v1_chr7_+_69521858_69521905	0.390598	HIF1A.p2	NM_013779|Magel2|27385|melanoma antigen, family L, 2	BC062913|Magel2|27385|melanoma antigen, family L, 2	AK086725|Magel2|27385|melanoma antigen, family L, 2	AK082944|Magel2|27385|melanoma antigen, family L, 2
mm9_v1_chr19_-_12870612_12870615	0.390272	HIF1A.p2	NM_053009|Zfp91|109910|zinc finger protein 91	AK147560|Zfp91|109910|zinc finger protein 91
mm9_v1_chr17_+_69506083_69506155	0.389762	HIF1A.p2	BC079858|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3	AK031156|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3	AF152247|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3	AK053532|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3	NM_013813|Epb4.1l3|13823|erythrocyte protein band 4.1-like 3
mm9_v1_chr11_-_85048564_85048637	0.388891	HIF1A.p2	BC018442|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	BC019152|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK133853|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	NM_025825|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK004888|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm9_v1_chr2_+_103810274_103810481	0.388373	HIF1A.p2	AK013416|Lmo2|16909|LIM domain only 2	BC057880|Lmo2|16909|LIM domain only 2	NM_001142335|Lmo2|16909|LIM domain only 2	NM_008505|Lmo2|16909|LIM domain only 2
mm9_v1_chr7_-_108986297_108986435	0.387904	HIF1A.p2	AK133359|Inppl1|16332|inositol polyphosphate phosphatase-like 1	AK149873|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_001122739|Inppl1|16332|inositol polyphosphate phosphatase-like 1	BC063080|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chr1_+_157005804_157006022	0.387518	HIF1A.p2	NM_021433|Stx6|58244|syntaxin 6	AK018167|Stx6|58244|syntaxin 6	AK031673|Stx6|58244|syntaxin 6	AK159392|Stx6|58244|syntaxin 6	AK019106|Stx6|58244|syntaxin 6	AK044905|Stx6|58244|syntaxin 6	AK049124|Stx6|58244|syntaxin 6	AK009690|Stx6|58244|syntaxin 6	AK151549|Stx6|58244|syntaxin 6	BC029205|Stx6|58244|syntaxin 6	AF237814|Stx6|58244|syntaxin 6
mm9_v1_chr10_-_60215524_60215546	0.386198	HIF1A.p2	AK034133|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	AF326986|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	AK157868|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	NM_023596|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	AK051317|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3
mm9_v1_chr7_+_107307748_107307807	0.385735	HIF1A.p2	AK011925|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	BC115472|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	NM_026010|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	BC115473|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	AK008917|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	AK013127|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)
mm9_v1_chr4_+_116549978_116550006	0.38501	HIF1A.p2	AK016928|Zswim5|74464|zinc finger, SWIM domain containing 5	AK122519|Zswim5|74464|zinc finger, SWIM domain containing 5	NM_001029912|Zswim5|74464|zinc finger, SWIM domain containing 5
mm9_v1_chr8_-_23509015_23509092	0.384492	HIF1A.p2	AK081243|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	AK052758|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	AK154988|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	NM_181325|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15
mm9_v1_chr2_-_84555162_84555500	0.383884	HIF1A.p2	BC065155|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AK082513|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AK145086|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AK173251|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AY894891|Zdhhc5|228136|zinc finger, DHHC domain containing 5	NM_144887|Zdhhc5|228136|zinc finger, DHHC domain containing 5
mm9_v1_chr11_+_20991321_20991416	0.383643	HIF1A.p2	AK151660|Peli1|67245|pellino 1	AK152900|Peli1|67245|pellino 1	AK152997|Peli1|67245|pellino 1	AK153372|Peli1|67245|pellino 1	NM_023324|Peli1|67245|pellino 1	AK167525|Peli1|67245|pellino 1	BC026695|Peli1|67245|pellino 1
mm9_v1_chr16_-_11134587_11134761	0.381484	HIF1A.p2	AK157288|Txndc11|106200|thioredoxin domain containing 11	BC029643|Txndc11|106200|thioredoxin domain containing 11	NM_029582|Txndc11|106200|thioredoxin domain containing 11	AK156154|Txndc11|106200|thioredoxin domain containing 11	AK170352|Txndc11|106200|thioredoxin domain containing 11	AK013044|Txndc11|106200|thioredoxin domain containing 11	AK155844|Txndc11|106200|thioredoxin domain containing 11	AK159484|Txndc11|106200|thioredoxin domain containing 11	BC020363|Txndc11|106200|thioredoxin domain containing 11	AK139620|Txndc11|106200|thioredoxin domain containing 11	AK157948|Txndc11|106200|thioredoxin domain containing 11	AK156590|Txndc11|106200|thioredoxin domain containing 11	AK029166|Txndc11|106200|thioredoxin domain containing 11
mm9_v1_chr12_+_85328810_85328840	0.381117	HIF1A.p2	NM_134188|Acot2|171210|acyl-CoA thioesterase 2	AK172617|Acot2|171210|acyl-CoA thioesterase 2	AK141651|Acot2|171210|acyl-CoA thioesterase 2	BC064469|Acot2|171210|acyl-CoA thioesterase 2
mm9_v1_chr3_+_108456817_108456934	0.380555	HIF1A.p2	NM_145543|Clcc1|229725|chloride channel CLIC-like 1	AK169803|Clcc1|229725|chloride channel CLIC-like 1	NM_001177771|Clcc1|229725|chloride channel CLIC-like 1	AK090092|Clcc1|229725|chloride channel CLIC-like 1	AK143631|Clcc1|229725|chloride channel CLIC-like 1	AK171296|Clcc1|229725|chloride channel CLIC-like 1	NM_001177770|Clcc1|229725|chloride channel CLIC-like 1	AK179081|Clcc1|229725|chloride channel CLIC-like 1
mm9_v1_chr19_-_38199737_38199810	0.380044	HIF1A.p2	BC093529|Rbp4|19662|retinol binding protein 4, plasma	NM_001159487|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr4_-_118966829_118966902	0.378768	HIF1A.p2	AK188049|Ybx1|22608|Y box protein 1	AF038994|Ybx1|22608|Y box protein 1
mm9_v1_chr13_+_49063750_49063790	0.378583	HIF1A.p2	AK014080|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene	AK021143|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene
mm9_v1_chr3_+_16083164_16083288	0.377925	HIF1A.p2	NM_001145919|Ythdf3|229096|YTH domain family 3	NM_172677|Ythdf3|229096|YTH domain family 3	BC067040|Ythdf3|229096|YTH domain family 3	AK039176|Ythdf3|229096|YTH domain family 3	AK137245|Ythdf3|229096|YTH domain family 3	BC067042|Ythdf3|229096|YTH domain family 3	AK053736|Ythdf3|229096|YTH domain family 3	BC057158|Ythdf3|229096|YTH domain family 3
mm9_v1_chr19_+_41557168_41557205	0.377604	HIF1A.p2	AK077424|Lcor|212391|ligand dependent nuclear receptor corepressor	AB076079|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr4_-_116793851_116793888	0.377143	HIF1A.p2	AK020599|Btbd19|78611|BTB (POZ) domain containing 19
mm9_v1_chr17_-_56765925_56766071	0.376635	HIF1A.p2	AK190637|Lonp1|74142|lon peptidase 1, mitochondrial
mm9_v1_chr4_-_134409149_134409155	0.375466	HIF1A.p2	AK038972|Tmem57|66146|transmembrane protein 57	BC054769|Tmem57|66146|transmembrane protein 57
mm9_v1_chr6_-_91423388_91423454	0.375228	HIF1A.p2	AK010479|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4	BC019405|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4	NM_133928|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4
mm9_v1_chr18_+_60720384_60720467	0.374757	HIF1A.p2	AK167509|Rbm22|66810|RNA binding motif protein 22	AK018452|Rbm22|66810|RNA binding motif protein 22	AK166600|Rbm22|66810|RNA binding motif protein 22	AK045116|Rbm22|66810|RNA binding motif protein 22	AK165277|Rbm22|66810|RNA binding motif protein 22	AK150271|Rbm22|66810|RNA binding motif protein 22	AK151758|Rbm22|66810|RNA binding motif protein 22	AK152252|Rbm22|66810|RNA binding motif protein 22	BC042691|Rbm22|66810|RNA binding motif protein 22	AK168919|Rbm22|66810|RNA binding motif protein 22	NM_025776|Rbm22|66810|RNA binding motif protein 22	BC080205|Rbm22|66810|RNA binding motif protein 22
mm9_v1_chr2_+_83484637_83484674	0.374105	HIF1A.p2	AK005661|Zc3h15|69082|zinc finger CCCH-type containing 15	AK139511|Zc3h15|69082|zinc finger CCCH-type containing 15	AK012012|Zc3h15|69082|zinc finger CCCH-type containing 15	AK152374|Zc3h15|69082|zinc finger CCCH-type containing 15	AK167696|Zc3h15|69082|zinc finger CCCH-type containing 15	AK159596|Zc3h15|69082|zinc finger CCCH-type containing 15
mm9_v1_chr8_+_77517536_77517607	0.374042	HIF1A.p2	AK156670|Hmgxb4|70823|HMG box domain containing 4	AK014640|Hmgxb4|70823|HMG box domain containing 4	BC048188|Hmgxb4|70823|HMG box domain containing 4	BC049800|Hmgxb4|70823|HMG box domain containing 4	NM_178017|Hmgxb4|70823|HMG box domain containing 4	BC023721|Hmgxb4|70823|HMG box domain containing 4
mm9_v1_chr9_-_14419410_14419443	0.373835	HIF1A.p2	NM_001081395|Amotl1|75723|angiomotin-like 1
mm9_v1_chr8_-_81032730_81032793	0.373401	HIF1A.p2	AF031568|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	BC089350|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	AK088213|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	AK041927|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	BC011441|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene
mm9_v1_chr10_-_68675679_68675845	0.373247	HIF1A.p2	AK084964|A930033H14Rik|320700|RIKEN cDNA A930033H14 gene	AK044689|A930033H14Rik|320700|RIKEN cDNA A930033H14 gene
mm9_v1_chr1_-_169215189_169215201	0.372632	HIF1A.p2	AK077517|Uck2|80914|uridine-cytidine kinase 2	BC023789|Uck2|80914|uridine-cytidine kinase 2
mm9_v1_chr15_-_36212893_36212934	0.372572	HIF1A.p2	NM_013923|Rnf19a|30945|ring finger protein 19A
mm9_v1_chr11_-_82721859_82721896	0.371519	HIF1A.p2	BC018399|Nle1|217011|notchless homolog 1 (Drosophila)	BC035421|Nle1|217011|notchless homolog 1 (Drosophila)	AK170853|Nle1|217011|notchless homolog 1 (Drosophila)	AK141230|Nle1|217011|notchless homolog 1 (Drosophila)	NM_145431|Nle1|217011|notchless homolog 1 (Drosophila)
mm9_v1_chr17_+_69733141_69733317	0.371324	HIF1A.p2	AK082051|Zfp161|22666|zinc finger protein 161	AK037725|Zfp161|22666|zinc finger protein 161	AK136762|Zfp161|22666|zinc finger protein 161	BC052017|Zfp161|22666|zinc finger protein 161	NM_009547|Zfp161|22666|zinc finger protein 161
mm9_v1_chr12_-_74647339_74647462	0.371032	HIF1A.p2	BC119224|Tmem30b|238257|transmembrane protein 30B	BC119226|Tmem30b|238257|transmembrane protein 30B	AK030302|Tmem30b|238257|transmembrane protein 30B	AK037246|Tmem30b|238257|transmembrane protein 30B	AK033580|Tmem30b|238257|transmembrane protein 30B	NM_178715|Tmem30b|238257|transmembrane protein 30B	AK169014|Tmem30b|238257|transmembrane protein 30B
mm9_v1_chr7_-_108986589_108986739	0.370927	HIF1A.p2	AF162781|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_010567|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chr13_-_13485585_13485897	0.370148	HIF1A.p2	AK190995|Gpr137b|83924|G protein-coupled receptor 137B	AK194643|Gpr137b|83924|G protein-coupled receptor 137B	AK198577|Gpr137b|83924|G protein-coupled receptor 137B	AK201617|Gpr137b|83924|G protein-coupled receptor 137B	AK204136|Gpr137b|83924|G protein-coupled receptor 137B	AK204647|Gpr137b|83924|G protein-coupled receptor 137B	AK195847|Gpr137b|83924|G protein-coupled receptor 137B	AK185470|Gpr137b|83924|G protein-coupled receptor 137B	AK050369|Gpr137b|83924|G protein-coupled receptor 137B	AK080884|Gpr137b|83924|G protein-coupled receptor 137B	AK172286|Gpr137b|83924|G protein-coupled receptor 137B	AK147921|Gpr137b|83924|G protein-coupled receptor 137B	BC003212|Gpr137b|83924|G protein-coupled receptor 137B	AK128965|Gpr137b|83924|G protein-coupled receptor 137B	NM_031999|Gpr137b|83924|G protein-coupled receptor 137B
mm9_v1_chr9_+_100544034_100544056	0.369067	HIF1A.p2	AK052003|Stag1|20842|stromal antigen 1	BC062954|Stag1|20842|stromal antigen 1	NM_009282|Stag1|20842|stromal antigen 1	AK017978|Stag1|20842|stromal antigen 1
mm9_v1_chr18_-_35113903_35113993	0.367672	HIF1A.p2	AK002634|Hspa9|15526|heat shock protein 9	AK004946|Hspa9|15526|heat shock protein 9	AK137109|Hspa9|15526|heat shock protein 9	D17556|Hspa9|15526|heat shock protein 9	L06896|Hspa9|15526|heat shock protein 9	D11089|Hspa9|15526|heat shock protein 9
mm9_v1_chr5_-_23289370_23289531	0.367261	HIF1A.p2	BC138533|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	BC145316|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK173290|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK160849|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_178403|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	BC008544|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK142271|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)
mm9_v1_chr7_-_34981664_34981695	0.366638	HIF1A.p2	BC115797|Pdcd2l|68079|programmed cell death 2-like	AK077948|Pdcd2l|68079|programmed cell death 2-like	NM_026549|Pdcd2l|68079|programmed cell death 2-like	AK151495|Pdcd2l|68079|programmed cell death 2-like	AK003339|Pdcd2l|68079|programmed cell death 2-like	AK154811|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr11_-_115569814_115569935	0.36633	HIF1A.p2	AK155800|Grb2|14784|growth factor receptor bound protein 2	AK166142|Grb2|14784|growth factor receptor bound protein 2	AK148148|Grb2|14784|growth factor receptor bound protein 2	AK172002|Grb2|14784|growth factor receptor bound protein 2	BC052377|Grb2|14784|growth factor receptor bound protein 2	NM_008163|Grb2|14784|growth factor receptor bound protein 2
mm9_v1_chr11_-_50244618_50244636	0.365194	HIF1A.p2	AK046625|Rufy1|216724|RUN and FYVE domain containing 1
mm9_v1_chr8_+_73929908_73929953	0.364807	HIF1A.p2	NM_172756|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK080768|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK087444|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK049395|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK078830|Ankle1|234396|ankyrin repeat and LEM domain containing 1	BC030436|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK083552|Ankle1|234396|ankyrin repeat and LEM domain containing 1	EU184014|Ankle1|234396|ankyrin repeat and LEM domain containing 1	BC094316|Ankle1|234396|ankyrin repeat and LEM domain containing 1
mm9_v1_chr7_+_140829388_140829408	0.364674	HIF1A.p2	AK144959|2700050L05Rik|214764|RIKEN cDNA 2700050L05 gene	BC072596|2700050L05Rik|214764|RIKEN cDNA 2700050L05 gene	AK144179|2700050L05Rik|214764|RIKEN cDNA 2700050L05 gene
mm9_v1_chr15_-_36212878_36212891	0.364519	HIF1A.p2	AK147768|Rnf19a|30945|ring finger protein 19A	AK166197|Rnf19a|30945|ring finger protein 19A
mm9_v1_chr3_-_135354151_135354490	0.364446	HIF1A.p2	M57999|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr3_-_97571843_97571861	0.363315	HIF1A.p2	BC057350|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr11_-_116713532_116713613	0.363241	HIF1A.p2	AF250135|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr14_-_67627598_67627723	0.362701	HIF1A.p2	AK220143|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC049081|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK139950|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK004667|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC085237|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK018668|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK155040|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AY057069|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK013467|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK007920|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AF067395|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK168482|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK169391|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	NM_009761|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like
mm9_v1_chr5_-_124804538_124804560	0.362544	HIF1A.p2	BC103772|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr4_-_133742915_133743027	0.361007	HIF1A.p2	AK085545|Ccdc21|70012|coiled-coil domain containing 21	BC008221|Ccdc21|70012|coiled-coil domain containing 21	AK030742|Ccdc21|70012|coiled-coil domain containing 21	AK141103|Ccdc21|70012|coiled-coil domain containing 21	AK010621|Ccdc21|70012|coiled-coil domain containing 21	NM_144527|Ccdc21|70012|coiled-coil domain containing 21
mm9_v1_chr16_-_5256000_5256054	0.360904	HIF1A.p2	AK198006|Fam86|70511|family with sequence similarity 86	BC039631|Fam86|70511|family with sequence similarity 86	BC051078|Fam86|70511|family with sequence similarity 86	AK017533|Fam86|70511|family with sequence similarity 86	AK133590|Fam86|70511|family with sequence similarity 86	NM_027446|Fam86|70511|family with sequence similarity 86	AK163493|Fam86|70511|family with sequence similarity 86
mm9_v1_chrX_+_159198302_159198437	0.360627	HIF1A.p2	NM_009031|Rbbp7|245688|retinoblastoma binding protein 7	AK146439|Rbbp7|245688|retinoblastoma binding protein 7	AK147062|Rbbp7|245688|retinoblastoma binding protein 7	AK153913|Rbbp7|245688|retinoblastoma binding protein 7	AK148852|Rbbp7|245688|retinoblastoma binding protein 7	U35142|Rbbp7|245688|retinoblastoma binding protein 7	BC003785|Rbbp7|245688|retinoblastoma binding protein 7	AK076016|Rbbp7|245688|retinoblastoma binding protein 7	AK135779|Rbbp7|245688|retinoblastoma binding protein 7	AK135956|Rbbp7|245688|retinoblastoma binding protein 7	AK078349|Rbbp7|245688|retinoblastoma binding protein 7	AK082892|Rbbp7|245688|retinoblastoma binding protein 7	AK136110|Rbbp7|245688|retinoblastoma binding protein 7	AK145531|Rbbp7|245688|retinoblastoma binding protein 7	AK146014|Rbbp7|245688|retinoblastoma binding protein 7	AK146904|Rbbp7|245688|retinoblastoma binding protein 7	AK146967|Rbbp7|245688|retinoblastoma binding protein 7	AK160023|Rbbp7|245688|retinoblastoma binding protein 7	AK132101|Rbbp7|245688|retinoblastoma binding protein 7	AK145651|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr2_+_112106470_112106612	0.360281	HIF1A.p2	BC062099|Slc12a6|107723|solute carrier family 12, member 6	NM_133649|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr13_+_55701256_55701508	0.359107	HIF1A.p2	BC055703|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK050684|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK146855|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK171600|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	BC027195|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	NM_146045|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK141739|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)
mm9_v1_chr18_+_4920537_4920702	0.358236	HIF1A.p2	AK021019|Svil|225115|supervillin	AK041925|Svil|225115|supervillin	BC099602|Svil|225115|supervillin
mm9_v1_chr9_-_53514219_53514352	0.358124	HIF1A.p2	AB232635|Rab39|270160|RAB39, member RAS oncogene family	BC049787|Rab39|270160|RAB39, member RAS oncogene family	AK053487|Rab39|270160|RAB39, member RAS oncogene family	AK049038|Rab39|270160|RAB39, member RAS oncogene family	NM_175562|Rab39|270160|RAB39, member RAS oncogene family
mm9_v1_chr7_-_149844708_149844708	0.35806	HIF1A.p2	NM_010514|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr8_-_126506732_126506777	0.358034	HIF1A.p2	AK081782|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10	AK011569|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10	AF266284|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10
mm9_v1_chr9_+_21397165_21397375	0.357707	HIF1A.p2	BC057071|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	NM_178619|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK030602|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK028799|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene
mm9_v1_chr7_-_149763980_149764029	0.357235	HIF1A.p2	AK135234|H19|14955|H19 fetal liver mRNA	AK145379|H19|14955|H19 fetal liver mRNA
mm9_v1_chr15_+_78861295_78861336	0.357038	HIF1A.p2	BC024107|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	NM_001161712|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	NM_013847|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AK076469|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
mm9_v1_chr7_+_107756069_107756204	0.35665	HIF1A.p2	AK169842|Rab6|19346|RAB6, member RAS oncogene family	NM_001163663|Rab6|19346|RAB6, member RAS oncogene family	NM_024287|Rab6|19346|RAB6, member RAS oncogene family	AK154012|Rab6|19346|RAB6, member RAS oncogene family
mm9_v1_chr11_+_80022573_80022582	0.356483	HIF1A.p2	BC046785|Rhot1|59040|ras homolog gene family, member T1	AK147749|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr15_+_75771484_75771517	0.356245	HIF1A.p2	AK019163|Zfp623|78834|zinc finger protein 623	BC086767|Zfp623|78834|zinc finger protein 623
mm9_v1_chr4_-_62180914_62181170	0.356071	HIF1A.p2	BC018236|Alad|17025|aminolevulinate, delta-, dehydratase	AK167673|Alad|17025|aminolevulinate, delta-, dehydratase	AK002300|Alad|17025|aminolevulinate, delta-, dehydratase	AK032908|Alad|17025|aminolevulinate, delta-, dehydratase	AK168119|Alad|17025|aminolevulinate, delta-, dehydratase	AK168132|Alad|17025|aminolevulinate, delta-, dehydratase	BC055930|Alad|17025|aminolevulinate, delta-, dehydratase	NM_008525|Alad|17025|aminolevulinate, delta-, dehydratase
mm9_v1_chr6_-_30459703_30459756	0.355214	HIF1A.p2	AK089486|Tmem209|72649|transmembrane protein 209	AK170465|Tmem209|72649|transmembrane protein 209	BC057109|Tmem209|72649|transmembrane protein 209	NM_178625|Tmem209|72649|transmembrane protein 209	BC052187|Tmem209|72649|transmembrane protein 209	AK029366|Tmem209|72649|transmembrane protein 209	AK089962|Tmem209|72649|transmembrane protein 209	AK078544|Tmem209|72649|transmembrane protein 209	AK044877|Tmem209|72649|transmembrane protein 209	AK084222|Tmem209|72649|transmembrane protein 209
mm9_v1_chr8_-_122099015_122099054	0.354659	HIF1A.p2	BC065074|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
mm9_v1_chr9_-_106150060_106150202	0.354366	HIF1A.p2	AK133283|Alas1|11655|aminolevulinic acid synthase 1	BC022110|Alas1|11655|aminolevulinic acid synthase 1
mm9_v1_chr12_-_119539909_119539930	0.354347	HIF1A.p2	NM_001166385|Sp4|20688|trans-acting transcription factor 4	NM_009239|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr17_-_57170896_57170957	0.354161	HIF1A.p2	AK077415|Khsrp|16549|KH-type splicing regulatory protein	AK156541|Khsrp|16549|KH-type splicing regulatory protein	NM_010613|Khsrp|16549|KH-type splicing regulatory protein
mm9_v1_chr12_+_16901671_16901783	0.353798	HIF1A.p2	NM_009072|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2
mm9_v1_chr14_+_63456514_63456721	0.353315	HIF1A.p2	AK086275|Wdfy2|268752|WD repeat and FYVE domain containing 2	NM_175546|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK131958|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK169499|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK151817|Wdfy2|268752|WD repeat and FYVE domain containing 2	BC116632|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK045072|Wdfy2|268752|WD repeat and FYVE domain containing 2
mm9_v1_chr14_+_65977510_65977519	0.351706	HIF1A.p2	AK155538|Zfp395|380912|zinc finger protein 395	NM_199029|Zfp395|380912|zinc finger protein 395
mm9_v1_chr16_-_57606866_57606989	0.351567	HIF1A.p2	BC038891|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	BC038682|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019808|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK080386|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK003195|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019979|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK012168|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK136657|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	NM_025599|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene
mm9_v1_chr6_+_17587046_17587119	0.351414	HIF1A.p2	AK150587|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	BC082589|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	NM_007604|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK007550|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AY544984|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK008204|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr14_-_21871400_21871464	0.350311	HIF1A.p2	AK004740|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit	BC090983|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr6_+_64992584_64992660	0.350036	HIF1A.p2	NM_007958|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	X69942|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr10_-_60610398_60610452	0.349988	HIF1A.p2	NM_009163|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr2_+_120802960_120803034	0.349005	HIF1A.p2	AK046793|Tmem62|96957|transmembrane protein 62
mm9_v1_chr2_-_26092876_26092939	0.348282	HIF1A.p2	AK157992|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK140324|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK165642|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	BC030934|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	NM_153559|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2
mm9_v1_chr14_+_76245115_76245135	0.347478	HIF1A.p2	AK166584|Tpt1|22070|tumor protein, translationally-controlled 1	AK169730|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr7_+_107520787_107520818	0.346605	HIF1A.p2	AK165331|C2cd3|277939|C2 calcium-dependent domain containing 3	AK162155|C2cd3|277939|C2 calcium-dependent domain containing 3
mm9_v1_chr15_+_103103335_103103351	0.346109	HIF1A.p2	BC085314|Copz1|56447|coatomer protein complex, subunit zeta 1	AK003302|Copz1|56447|coatomer protein complex, subunit zeta 1	AK167636|Copz1|56447|coatomer protein complex, subunit zeta 1	BC002246|Copz1|56447|coatomer protein complex, subunit zeta 1	BC025041|Copz1|56447|coatomer protein complex, subunit zeta 1	BC039920|Copz1|56447|coatomer protein complex, subunit zeta 1	BC062203|Copz1|56447|coatomer protein complex, subunit zeta 1	AB037370|Copz1|56447|coatomer protein complex, subunit zeta 1	NM_019817|Copz1|56447|coatomer protein complex, subunit zeta 1	BC052891|Copz1|56447|coatomer protein complex, subunit zeta 1	BC058524|Copz1|56447|coatomer protein complex, subunit zeta 1
mm9_v1_chr10_-_62113923_62113962	0.345589	HIF1A.p2	BC055440|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	AF334104|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	NM_053183|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	BC049906|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	AK162423|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
mm9_v1_chr11_-_3166349_3166433	0.343502	HIF1A.p2	BC039649|Drg1|13494|developmentally regulated GTP binding protein 1	AK080814|Drg1|13494|developmentally regulated GTP binding protein 1	D10715|Drg1|13494|developmentally regulated GTP binding protein 1	NM_007879|Drg1|13494|developmentally regulated GTP binding protein 1	AK144438|Drg1|13494|developmentally regulated GTP binding protein 1	AK044194|Drg1|13494|developmentally regulated GTP binding protein 1	AK155061|Drg1|13494|developmentally regulated GTP binding protein 1	AK090156|Drg1|13494|developmentally regulated GTP binding protein 1
mm9_v1_chr4_-_140616455_140616494	0.342436	HIF1A.p2	NM_001145958|Crocc|230872|ciliary rootlet coiled-coil, rootletin
mm9_v1_chr7_+_137789817_137789916	0.341387	HIF1A.p2	AK198910|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr4_+_140857147_140857182	0.339298	HIF1A.p2	AK137704|Epha2|13836|Eph receptor A2	AK144202|Epha2|13836|Eph receptor A2	NM_010139|Epha2|13836|Eph receptor A2	U07634|Epha2|13836|Eph receptor A2	BC140960|Epha2|13836|Eph receptor A2	X78339|Epha2|13836|Eph receptor A2
mm9_v1_chr13_+_68721096_68721152	0.338104	HIF1A.p2	AK009264|Fastkd3|69577|FAST kinase domains 3	AK033189|Fastkd3|69577|FAST kinase domains 3	NM_027123|Fastkd3|69577|FAST kinase domains 3	AK148902|Fastkd3|69577|FAST kinase domains 3	AK031142|Fastkd3|69577|FAST kinase domains 3	AK032530|Fastkd3|69577|FAST kinase domains 3	AK036778|Fastkd3|69577|FAST kinase domains 3	BC042506|Fastkd3|69577|FAST kinase domains 3	BC060688|Fastkd3|69577|FAST kinase domains 3
mm9_v1_chr11_-_93746982_93747028	0.337969	HIF1A.p2	AK154637|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	AK032265|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr11_+_116976506_116976598	0.337277	HIF1A.p2	BC005766|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	BC086620|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	AK004818|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	BC055849|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)
mm9_v1_chr1_-_33814590_33814594	0.337229	HIF1A.p2	BC016230|Bag2|213539|BCL2-associated athanogene 2	NM_145392|Bag2|213539|BCL2-associated athanogene 2
mm9_v1_chr5_-_115608153_115608220	0.336614	HIF1A.p2	AK031525|Mlec|109154|malectin	AK075940|Mlec|109154|malectin	NM_175403|Mlec|109154|malectin
mm9_v1_chr6_+_106719113_106719221	0.336412	HIF1A.p2	AK135791|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK010662|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AB063106|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK152739|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	BC031764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	NM_027296|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK011764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK166804|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK139764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1
mm9_v1_chr12_-_55963776_55963890	0.336198	HIF1A.p2	AK147174|Cfl2|12632|cofilin 2, muscle	BC007138|Cfl2|12632|cofilin 2, muscle	AK004659|Cfl2|12632|cofilin 2, muscle	L29468|Cfl2|12632|cofilin 2, muscle	NM_007688|Cfl2|12632|cofilin 2, muscle
mm9_v1_chr7_-_126937466_126937571	0.336025	HIF1A.p2	AK160698|Eri2|71151|exoribonuclease 2	AK129376|Eri2|71151|exoribonuclease 2	BC090961|Eri2|71151|exoribonuclease 2	AK015831|Eri2|71151|exoribonuclease 2	AK016902|Eri2|71151|exoribonuclease 2	AK165163|Eri2|71151|exoribonuclease 2	AK135821|Eri2|71151|exoribonuclease 2	BC052150|Eri2|71151|exoribonuclease 2	AK029056|Eri2|71151|exoribonuclease 2	AK141507|Eri2|71151|exoribonuclease 2	AK137621|Eri2|71151|exoribonuclease 2	NM_027698|Eri2|71151|exoribonuclease 2
mm9_v1_chr6_+_146837012_146837178	0.335506	HIF1A.p2	NM_001170433|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	NM_026221|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK146575|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC072603|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK154482|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK173133|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC035209|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm9_v1_chr10_+_61143056_61143106	0.335338	HIF1A.p2	AK157843|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	AK168175|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	AK159239|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	NM_009120|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	BC005549|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	L20294|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr5_+_108890247_108890362	0.335012	HIF1A.p2	AK033609|Pcgf3|69587|polycomb group ring finger 3	AK085574|Pcgf3|69587|polycomb group ring finger 3	AK089091|Pcgf3|69587|polycomb group ring finger 3	NM_172716|Pcgf3|69587|polycomb group ring finger 3
mm9_v1_chr16_+_87354429_87354497	0.334352	HIF1A.p2	AY456393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_001159331|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_026366|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116394|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK160298|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK145617|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC098330|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK012019|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AY536887|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm9_v1_chr11_+_68505616_68505655	0.333844	HIF1A.p2	AK045066|Myh10|77579|myosin, heavy polypeptide 10, non-muscle	AK045074|Myh10|77579|myosin, heavy polypeptide 10, non-muscle	BC089011|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr15_+_10644590_10644632	0.333336	HIF1A.p2	AK030258|4930556M19Rik|75259|RIKEN cDNA 4930556M19 gene	AK016150|4930556M19Rik|75259|RIKEN cDNA 4930556M19 gene	AK005793|4930556M19Rik|75259|RIKEN cDNA 4930556M19 gene
mm9_v1_chr3_-_138738059_138738141	0.331828	HIF1A.p2	AK164159|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK166315|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK154852|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK155793|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK160989|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK052125|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1
mm9_v1_chr16_+_92058498_92058582	0.330875	HIF1A.p2	AK165590|Mrps6|121022|mitochondrial ribosomal protein S6	AB049943|Mrps6|121022|mitochondrial ribosomal protein S6	AY061856|Mrps6|121022|mitochondrial ribosomal protein S6	AK144718|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK166374|Mrps6|121022|mitochondrial ribosomal protein S6	AK167304|Mrps6|121022|mitochondrial ribosomal protein S6	NM_017391|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK167316|Mrps6|121022|mitochondrial ribosomal protein S6	BC027271|Mrps6|121022|mitochondrial ribosomal protein S6	NM_080456|Mrps6|121022|mitochondrial ribosomal protein S6
mm9_v1_chr11_-_104303565_104303604	0.330804	HIF1A.p2	AK153679|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	AK122484|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	NM_001081045|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene
mm9_v1_chr15_+_73578771_73578842	0.329443	HIF1A.p2	AK143702|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK172192|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK014601|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr10_+_127759640_127759648	0.326209	HIF1A.p2	AK013014|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK019927|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr16_+_44347501_44347594	0.325007	HIF1A.p2	NM_144550|Spice1|212514|spindle and centriole associated protein 1	AK165031|Spice1|212514|spindle and centriole associated protein 1	BC052381|Spice1|212514|spindle and centriole associated protein 1	BC056960|Spice1|212514|spindle and centriole associated protein 1	AK048789|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr5_+_145016734_145016797	0.324801	HIF1A.p2	X61454|Bri3|55950|brain protein I3
mm9_v1_chr19_-_6141100_6141219	0.324197	HIF1A.p2	AF143680|Arl2|56327|ADP-ribosylation factor-like 2	BC052938|Arl2|56327|ADP-ribosylation factor-like 2	BC060259|Arl2|56327|ADP-ribosylation factor-like 2	AK011366|Arl2|56327|ADP-ribosylation factor-like 2	NM_019722|Arl2|56327|ADP-ribosylation factor-like 2	BC080803|Arl2|56327|ADP-ribosylation factor-like 2
mm9_v1_chr8_-_55615268_55615375	0.323114	HIF1A.p2	BC019390|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	AK028314|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	BC054817|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	AK007432|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	AK048051|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	NM_029701|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)
mm9_v1_chr3_-_127599117_127599275	0.323007	HIF1A.p2	BC116791|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	BC116793|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK017758|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK012470|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK163003|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK162420|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	NM_027482|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene
mm9_v1_chr8_-_125075222_125075228	0.321731	HIF1A.p2	NM_001037298|Fam38a|234839|family with sequence similarity 38, member A
mm9_v1_chr7_+_28964486_28964515	0.321514	HIF1A.p2	BC019545|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_001037957|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_010092|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	Y18280|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr10_+_79957650_79957698	0.320783	HIF1A.p2	BC058700|Onecut3|246086|one cut domain, family member 3	NM_139226|Onecut3|246086|one cut domain, family member 3	AY080897|Onecut3|246086|one cut domain, family member 3
mm9_v1_chr10_-_61246611_61246701	0.320718	HIF1A.p2	AF336305|H2afy2|404634|H2A histone family, member Y2	NM_207000|H2afy2|404634|H2A histone family, member Y2	BC045140|H2afy2|404634|H2A histone family, member Y2	AK165020|H2afy2|404634|H2A histone family, member Y2	AK018355|H2afy2|404634|H2A histone family, member Y2	BC046794|H2afy2|404634|H2A histone family, member Y2	AK078464|H2afy2|404634|H2A histone family, member Y2	AK032636|H2afy2|404634|H2A histone family, member Y2	AK020744|H2afy2|404634|H2A histone family, member Y2
mm9_v1_chr8_+_63702967_63703040	0.320284	HIF1A.p2	NM_021506|Sh3rf1|59009|SH3 domain containing ring finger 1	BC060113|Sh3rf1|59009|SH3 domain containing ring finger 1	BC060696|Sh3rf1|59009|SH3 domain containing ring finger 1	AK088003|Sh3rf1|59009|SH3 domain containing ring finger 1	AK148137|Sh3rf1|59009|SH3 domain containing ring finger 1
mm9_v1_chr9_+_108594526_108594578	0.320148	HIF1A.p2	AK132728|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	AK132824|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha
mm9_v1_chr16_-_84835812_84835914	0.317835	HIF1A.p2	BC010766|Atp5j|11957|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F	NM_016755|Atp5j|11957|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
mm9_v1_chr8_+_14911653_14911743	0.317579	HIF1A.p2	AK147669|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	AK051721|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	NM_001037736|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	NM_172751|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	AK054038|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	AK220332|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10	BC066074|Arhgef10|234094|Rho guanine nucleotide exchange factor (GEF) 10
mm9_v1_chr17_+_69732689_69732721	0.317493	HIF1A.p2	AK146201|Zfp161|22666|zinc finger protein 161	AK145517|Zfp161|22666|zinc finger protein 161
mm9_v1_chrX_-_45807339_45807474	0.315045	HIF1A.p2	AK155203|Elf4|56501|E74-like factor 4 (ets domain transcription factor)
mm9_v1_chr6_-_97155541_97155640	0.313355	HIF1A.p2	BC002002|Uba3|22200|ubiquitin-like modifier activating enzyme 3	BC080776|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK048148|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK032514|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK166655|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK168859|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK043801|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK014433|Uba3|22200|ubiquitin-like modifier activating enzyme 3	NM_001111106|Uba3|22200|ubiquitin-like modifier activating enzyme 3	NM_011666|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK159381|Uba3|22200|ubiquitin-like modifier activating enzyme 3
mm9_v1_chr3_+_28704426_28704449	0.312785	HIF1A.p2	AK170359|Rpl22l1|68028|ribosomal protein L22 like 1	AK008915|Rpl22l1|68028|ribosomal protein L22 like 1	AK013966|Rpl22l1|68028|ribosomal protein L22 like 1	NM_026517|Rpl22l1|68028|ribosomal protein L22 like 1	AK010265|Rpl22l1|68028|ribosomal protein L22 like 1	BC026533|Rpl22l1|68028|ribosomal protein L22 like 1
mm9_v1_chr18_+_31948788_31948829	0.312673	HIF1A.p2	AK011600|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027002|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	AK009093|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	BC004810|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027101|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D
mm9_v1_chr15_-_93349866_93349962	0.312104	HIF1A.p2	BC117892|Prickle1|106042|prickle homolog 1 (Drosophila)	BC117893|Prickle1|106042|prickle homolog 1 (Drosophila)	AK147883|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr6_+_116287992_116288071	0.311578	HIF1A.p2	AK154976|March8|71779|membrane-associated ring finger (C3HC4) 8	BC050908|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr14_-_32643594_32643685	0.311044	HIF1A.p2	BC051456|Ankrd28|105522|ankyrin repeat domain 28	BC094609|Ankrd28|105522|ankyrin repeat domain 28	NM_001024604|Ankrd28|105522|ankyrin repeat domain 28
mm9_v1_chr1_+_141318927_141318961	0.310385	HIF1A.p2	NM_172643|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog	AK036544|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog
mm9_v1_chr13_+_74777288_74777300	0.310199	HIF1A.p2	AK081181|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK163954|Erap1|80898|endoplasmic reticulum aminopeptidase 1
mm9_v1_chr16_+_13780778_13780842	0.309411	HIF1A.p2	NM_001039521|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	AK021410|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	AK165676|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	AK080680|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	BC138774|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	BC138776|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	AK080397|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)
mm9_v1_chr2_+_172825651_172825682	0.309356	HIF1A.p2	AK146058|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK156681|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK014325|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK035278|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr17_+_8138892_8139016	0.309038	HIF1A.p2	AK016364|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	BC150663|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)
mm9_v1_chr17_+_57201623_57201743	0.30781	HIF1A.p2	AK077528|Crb3|224912|crumbs homolog 3 (Drosophila)	AK167279|Crb3|224912|crumbs homolog 3 (Drosophila)	BC024462|Crb3|224912|crumbs homolog 3 (Drosophila)	NM_177638|Crb3|224912|crumbs homolog 3 (Drosophila)
mm9_v1_chr5_-_139936448_139936481	0.307011	HIF1A.p2	BC044867|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene	AK014271|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene	BC058580|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene
mm9_v1_chr15_+_41620484_41620584	0.305299	HIF1A.p2	NM_001130165|Oxr1|170719|oxidation resistance 1	BC089183|Oxr1|170719|oxidation resistance 1
mm9_v1_chr16_+_13256573_13256634	0.304385	HIF1A.p2	NM_001122667|Mkl2|239719|MKL/myocardin-like 2	X66901|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr15_+_80117667_80117667	0.304355	HIF1A.p2	AK147585|Cacna1i|239556|calcium channel, voltage-dependent, alpha 1I subunit	NM_001044308|Cacna1i|239556|calcium channel, voltage-dependent, alpha 1I subunit
mm9_v1_chr12_-_51750204_51750242	0.303386	HIF1A.p2	NM_008858|Prkd1|18760|protein kinase D1
mm9_v1_chr15_+_102034075_102034116	0.303223	HIF1A.p2	AK144707|Zfp740|68744|zinc finger protein 740	AK170207|Zfp740|68744|zinc finger protein 740
mm9_v1_chr11_-_70051361_70051426	0.30316	HIF1A.p2	AK169173|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK170380|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK003842|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177601|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177603|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177606|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177607|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_026757|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_145758|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr14_-_65059694_65059876	0.302161	HIF1A.p2	AK002356|Msra|110265|methionine sulfoxide reductase A	AK009822|Msra|110265|methionine sulfoxide reductase A	AK030278|Msra|110265|methionine sulfoxide reductase A	BC014738|Msra|110265|methionine sulfoxide reductase A	AK049714|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr3_+_41368846_41368849	0.30166	HIF1A.p2	AK129445|Phf17|269424|PHD finger protein 17
mm9_v1_chr17_-_15963372_15963555	0.301243	HIF1A.p2	BC138890|Rgmb|68799|RGM domain family, member B	AK035713|Rgmb|68799|RGM domain family, member B	AK046637|Rgmb|68799|RGM domain family, member B	AK080819|Rgmb|68799|RGM domain family, member B	BC096024|Rgmb|68799|RGM domain family, member B	AK030386|Rgmb|68799|RGM domain family, member B	AK047390|Rgmb|68799|RGM domain family, member B	BC030405|Rgmb|68799|RGM domain family, member B	AJ557514|Rgmb|68799|RGM domain family, member B	NM_178615|Rgmb|68799|RGM domain family, member B
mm9_v1_chr3_+_110053107_110053119	0.30119	HIF1A.p2	AK030551|C130013H08Rik|100327264|RIKEN cDNA C130013H08 gene
mm9_v1_chr7_-_53086135_53086313	0.300904	HIF1A.p2	BC008121|Grwd1|101612|glutamate-rich WD repeat containing 1	BC083143|Grwd1|101612|glutamate-rich WD repeat containing 1	BC028896|Grwd1|101612|glutamate-rich WD repeat containing 1	NM_153419|Grwd1|101612|glutamate-rich WD repeat containing 1	AK077611|Grwd1|101612|glutamate-rich WD repeat containing 1	AB001539|Grwd1|101612|glutamate-rich WD repeat containing 1
mm9_v1_chr16_+_36072143_36072202	0.300891	HIF1A.p2	AK020822|Ccdc58|381045|coiled-coil domain containing 58	AK135450|Ccdc58|381045|coiled-coil domain containing 58	BC024406|Ccdc58|381045|coiled-coil domain containing 58	BC053690|Ccdc58|381045|coiled-coil domain containing 58
mm9_v1_chr18_-_35113995_35113999	0.300887	HIF1A.p2	AK030299|Hspa9|15526|heat shock protein 9	AK145965|Hspa9|15526|heat shock protein 9	AK167856|Hspa9|15526|heat shock protein 9
mm9_v1_chr8_+_108583449_108583790	0.300153	HIF1A.p2	NM_010901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK147708|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK155087|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK051602|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK134054|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK039929|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK220187|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120900|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	D85612|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887629|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887630|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887631|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
mm9_v1_chr5_-_31262588_31262733	0.299927	HIF1A.p2	BC017527|Preb|50907|prolactin regulatory element binding	AF150808|Preb|50907|prolactin regulatory element binding	AF193017|Preb|50907|prolactin regulatory element binding	AK029838|Preb|50907|prolactin regulatory element binding	AK036866|Preb|50907|prolactin regulatory element binding	AK013330|Preb|50907|prolactin regulatory element binding	AK151288|Preb|50907|prolactin regulatory element binding	NM_016703|Preb|50907|prolactin regulatory element binding
mm9_v1_chr13_-_38620304_38620305	0.299217	HIF1A.p2	AK224957|Txndc5|105245|thioredoxin domain containing 5	AK224958|Txndc5|105245|thioredoxin domain containing 5	AK224962|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chrX_-_91368427_91368500	0.296033	HIF1A.p2	BC028506|Zfx|22764|zinc finger protein X-linked	M32308|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr18_+_24113147_24113390	0.294181	HIF1A.p2	AK032001|Zfp397|69256|zinc finger protein 397	NM_027007|Zfp397|69256|zinc finger protein 397	AK078454|Zfp397|69256|zinc finger protein 397	BC021456|Zfp397|69256|zinc finger protein 397	AK046270|Zfp397|69256|zinc finger protein 397	AK013086|Zfp397|69256|zinc finger protein 397
mm9_v1_chr15_-_77672472_77672592	0.292884	HIF1A.p2	AK147216|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147221|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK165379|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC116417|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC116418|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC128497|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC128498|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147215|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147222|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147203|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AJ312390|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147223|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK040822|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK083071|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147209|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147210|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147235|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147296|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147407|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147233|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147206|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK053221|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147208|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147430|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	NM_022410|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147211|Myh9|17886|myosin, heavy polypeptide 9, non-muscle
mm9_v1_chr8_+_9977802_9977903	0.292014	HIF1A.p2	AK044407|Abhd13|68904|abhydrolase domain containing 13	BC043690|Abhd13|68904|abhydrolase domain containing 13
mm9_v1_chr4_-_142752030_142752032	0.291556	HIF1A.p2	AK156880|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr11_-_93829704_93829834	0.291434	HIF1A.p2	NM_008704|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in
mm9_v1_chr2_+_163899842_163899948	0.2911	HIF1A.p2	BC054521|Stk4|58231|serine/threonine kinase 4	AF271360|Stk4|58231|serine/threonine kinase 4	AK028838|Stk4|58231|serine/threonine kinase 4	NM_021420|Stk4|58231|serine/threonine kinase 4
mm9_v1_chr4_+_63219786_63219927	0.290864	HIF1A.p2	AK144990|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK030466|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK206525|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK161160|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene
mm9_v1_chr11_-_93829556_93829648	0.290389	HIF1A.p2	AF033377|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	AK034899|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	M35970|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	BC005629|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	U85511|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	AK136353|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in
mm9_v1_chr5_+_130231000_130231002	0.289666	HIF1A.p2	BC055893|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr10_-_79896388_79896431	0.289617	HIF1A.p2	AK170674|Tcf3|21423|transcription factor 3	NM_001164147|Tcf3|21423|transcription factor 3	NM_001164148|Tcf3|21423|transcription factor 3	NM_001164149|Tcf3|21423|transcription factor 3	NM_001164150|Tcf3|21423|transcription factor 3	NM_001164151|Tcf3|21423|transcription factor 3	NM_001164152|Tcf3|21423|transcription factor 3	NM_001164153|Tcf3|21423|transcription factor 3	NM_011548|Tcf3|21423|transcription factor 3	AK147735|Tcf3|21423|transcription factor 3
mm9_v1_chr11_+_53164287_53164334	0.288212	HIF1A.p2	AF190449|Aff4|93736|AF4/FMR2 family, member 4
mm9_v1_chr15_-_89185996_89186115	0.288201	HIF1A.p2	AK085435|Lmf2|105847|lipase maturation factor 2	AK149916|Lmf2|105847|lipase maturation factor 2	BC038039|Lmf2|105847|lipase maturation factor 2	AK042427|Lmf2|105847|lipase maturation factor 2	AK158371|Lmf2|105847|lipase maturation factor 2	AK171488|Lmf2|105847|lipase maturation factor 2	AK149934|Lmf2|105847|lipase maturation factor 2	NM_178919|Lmf2|105847|lipase maturation factor 2
mm9_v1_chr13_+_55694491_55694540	0.287619	HIF1A.p2	NM_026211|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK012474|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK152496|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK152581|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK153383|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK010259|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK169001|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	BC049282|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	BC058801|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	BC004691|Tmed9|67511|transmembrane emp24 protein transport domain containing 9
mm9_v1_chr3_+_133899454_133899460	0.286944	HIF1A.p2	BC065149|Cxxc4|319478|CXXC finger 4
mm9_v1_chr3_-_97571863_97571875	0.286919	HIF1A.p2	BC141172|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chrX_-_49034778_49034778	0.286689	HIF1A.p2	NM_001077202|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr9_+_35366065_35366179	0.285938	HIF1A.p2	AK030639|Pus3|67049|pseudouridine synthase 3
mm9_v1_chr11_+_59120429_59120467	0.28511	HIF1A.p2	AK087490|Wnt9a|216795|wingless-type MMTV integration site 9A	NM_139298|Wnt9a|216795|wingless-type MMTV integration site 9A	BC066165|Wnt9a|216795|wingless-type MMTV integration site 9A	AB072311|Wnt9a|216795|wingless-type MMTV integration site 9A
mm9_v1_chrX_-_90877453_90877549	0.284439	HIF1A.p2	AK139486|Pola1|18968|polymerase (DNA directed), alpha 1	AK037836|Pola1|18968|polymerase (DNA directed), alpha 1	D13543|Pola1|18968|polymerase (DNA directed), alpha 1	BC138047|Pola1|18968|polymerase (DNA directed), alpha 1	D17384|Pola1|18968|polymerase (DNA directed), alpha 1	NM_008892|Pola1|18968|polymerase (DNA directed), alpha 1
mm9_v1_chr1_-_194956399_194956457	0.284227	HIF1A.p2	AK088756|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK147251|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK052355|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	NM_145415|Diexf|215193|digestive organ expansion factor homolog (zebrafish)
mm9_v1_chr8_-_73132125_73132308	0.283856	HIF1A.p2	BC002150|Ssbp4|76900|single stranded DNA binding protein 4	AK157387|Ssbp4|76900|single stranded DNA binding protein 4	AK154336|Ssbp4|76900|single stranded DNA binding protein 4	NM_133772|Ssbp4|76900|single stranded DNA binding protein 4
mm9_v1_chr4_-_126645421_126645456	0.282328	HIF1A.p2	AK129137|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr4_-_116480136_116480166	0.281689	HIF1A.p2	BC023109|Toe1|68276|target of EGR1, member 1 (nuclear)	AK082975|Toe1|68276|target of EGR1, member 1 (nuclear)	AK016889|Toe1|68276|target of EGR1, member 1 (nuclear)	AK019829|Toe1|68276|target of EGR1, member 1 (nuclear)	NM_026654|Toe1|68276|target of EGR1, member 1 (nuclear)
mm9_v1_chr9_+_98197001_98197080	0.281403	HIF1A.p2	BC005737|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	NM_144533|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK040783|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041526|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041897|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3
mm9_v1_chr2_+_3035629_3035684	0.281125	HIF1A.p2	NM_001081161|Fam171a1|269233|family with sequence similarity 171, member A1	AK032237|Fam171a1|269233|family with sequence similarity 171, member A1
mm9_v1_chr8_+_63703064_63703069	0.280269	HIF1A.p2	AF030131|Sh3rf1|59009|SH3 domain containing ring finger 1
mm9_v1_chr19_+_46576779_46576908	0.280077	HIF1A.p2	AF281047|Trim8|93679|tripartite motif-containing 8	BC152343|Trim8|93679|tripartite motif-containing 8	BC152344|Trim8|93679|tripartite motif-containing 8	BC037065|Trim8|93679|tripartite motif-containing 8	BC060094|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr13_-_67033920_67034045	0.278871	HIF1A.p2	BC085282|Mterfd1|66410|MTERF domain containing 1	AK034645|Mterfd1|66410|MTERF domain containing 1	BC025173|Mterfd1|66410|MTERF domain containing 1	AK002299|Mterfd1|66410|MTERF domain containing 1	AK011934|Mterfd1|66410|MTERF domain containing 1	AK010525|Mterfd1|66410|MTERF domain containing 1	NM_025547|Mterfd1|66410|MTERF domain containing 1
mm9_v1_chr16_+_90386511_90386581	0.277836	HIF1A.p2	BC137788|Hunk|26559|hormonally upregulated Neu-associated kinase	BC137790|Hunk|26559|hormonally upregulated Neu-associated kinase
mm9_v1_chr14_-_73109254_73109390	0.275312	HIF1A.p2	AK154790|Fndc3a|319448|fibronectin type III domain containing 3A	AK172458|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr7_+_29526999_29527026	0.275146	HIF1A.p2	AK010491|Sars2|71984|seryl-aminoacyl-tRNA synthetase 2	BC079664|Sars2|71984|seryl-aminoacyl-tRNA synthetase 2	NM_023637|Sars2|71984|seryl-aminoacyl-tRNA synthetase 2	AB029949|Sars2|71984|seryl-aminoacyl-tRNA synthetase 2	AK087606|Sars2|71984|seryl-aminoacyl-tRNA synthetase 2	AK140760|Sars2|71984|seryl-aminoacyl-tRNA synthetase 2	AK135222|Sars2|71984|seryl-aminoacyl-tRNA synthetase 2
mm9_v1_chr5_+_14025270_14025485	0.274779	HIF1A.p2	AK141295|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_011348|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	Z93947|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	Z93948|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	BC057956|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	AK142340|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	AK159214|Sema3e|20349|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
mm9_v1_chr9_-_58160769_58160855	0.274577	HIF1A.p2	AF357006|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr10_+_80085486_80085637	0.274268	HIF1A.p2	AK152413|Csnk1g2|103236|casein kinase 1, gamma 2	NM_134002|Csnk1g2|103236|casein kinase 1, gamma 2	BC004839|Csnk1g2|103236|casein kinase 1, gamma 2	BC035440|Csnk1g2|103236|casein kinase 1, gamma 2
mm9_v1_chr8_+_87356149_87356307	0.274059	HIF1A.p2	AK002738|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK003314|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK019570|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK028227|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC061069|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	NM_183358|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK009723|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC022592|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm9_v1_chr12_+_109792925_109792929	0.273623	HIF1A.p2	BC059810|Evl|14026|Ena-vasodilator stimulated phosphoprotein	NM_001163394|Evl|14026|Ena-vasodilator stimulated phosphoprotein	NM_007965|Evl|14026|Ena-vasodilator stimulated phosphoprotein
mm9_v1_chr11_+_11586215_11586246	0.272112	HIF1A.p2	NM_001025597|Ikzf1|22778|IKAROS family zinc finger 1	NM_009578|Ikzf1|22778|IKAROS family zinc finger 1	AK036833|Ikzf1|22778|IKAROS family zinc finger 1	AK040268|Ikzf1|22778|IKAROS family zinc finger 1
mm9_v1_chr6_-_99616745_99616839	0.271753	HIF1A.p2	AY628329|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	AK007268|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	BC027014|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	AK005054|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	NM_025829|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	AK035794|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3
mm9_v1_chr2_-_13977563_13977661	0.271223	HIF1A.p2	AK004461|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	AK085898|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	NM_001012396|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	NM_013935|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
mm9_v1_chr9_+_108208535_108208803	0.27034	HIF1A.p2	BC068115|Rhoa|11848|ras homolog gene family, member A	NM_016802|Rhoa|11848|ras homolog gene family, member A	AK150475|Rhoa|11848|ras homolog gene family, member A	AK150294|Rhoa|11848|ras homolog gene family, member A	AK077606|Rhoa|11848|ras homolog gene family, member A	AK172051|Rhoa|11848|ras homolog gene family, member A	AK083624|Rhoa|11848|ras homolog gene family, member A	AK152629|Rhoa|11848|ras homolog gene family, member A	BC096423|Rhoa|11848|ras homolog gene family, member A	AK165512|Rhoa|11848|ras homolog gene family, member A
mm9_v1_chr11_+_68884268_68884388	0.270161	HIF1A.p2	NM_025838|Tmem107|66910|transmembrane protein 107	NM_028336|Tmem107|66910|transmembrane protein 107	AK012938|Tmem107|66910|transmembrane protein 107	AK154279|Tmem107|66910|transmembrane protein 107	AK003403|Tmem107|66910|transmembrane protein 107	AK002804|Tmem107|66910|transmembrane protein 107	BC096686|Tmem107|66910|transmembrane protein 107	BC137584|Tmem107|66910|transmembrane protein 107	BC120499|Tmem107|66910|transmembrane protein 107
mm9_v1_chrX_+_53984926_53984997	0.270116	HIF1A.p2	AK128904|Fhl1|14199|four and a half LIM domains 1	NM_010211|Fhl1|14199|four and a half LIM domains 1	U77039|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr6_+_71781292_71781391	0.269666	HIF1A.p2	AK038129|Immt|76614|inner membrane protein, mitochondrial	NM_029673|Immt|76614|inner membrane protein, mitochondrial	AK146640|Immt|76614|inner membrane protein, mitochondrial	AK159909|Immt|76614|inner membrane protein, mitochondrial	AK049189|Immt|76614|inner membrane protein, mitochondrial	AK152588|Immt|76614|inner membrane protein, mitochondrial	AK030841|Immt|76614|inner membrane protein, mitochondrial	AK157805|Immt|76614|inner membrane protein, mitochondrial
mm9_v1_chr1_-_188573165_188573236	0.269412	HIF1A.p2	AK007616|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK013217|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	BC006787|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK010658|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK087997|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK013204|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK169088|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	NM_026041|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)
mm9_v1_chr12_+_27154180_27154275	0.269343	HIF1A.p2	BC027329|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK004595|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK153469|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK153429|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150543|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150885|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150725|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150512|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	BC057565|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
mm9_v1_chr11_-_69373555_69373681	0.269222	HIF1A.p2	BC052001|Efnb3|13643|ephrin B3	BC058617|Efnb3|13643|ephrin B3	AK048305|Efnb3|13643|ephrin B3
mm9_v1_chr17_+_57388873_57388970	0.268534	HIF1A.p2	NM_134125|Trip10|106628|thyroid hormone receptor interactor 10	BC003249|Trip10|106628|thyroid hormone receptor interactor 10	AK149902|Trip10|106628|thyroid hormone receptor interactor 10	AY081142|Trip10|106628|thyroid hormone receptor interactor 10	AK088909|Trip10|106628|thyroid hormone receptor interactor 10	AF502565|Trip10|106628|thyroid hormone receptor interactor 10
mm9_v1_chr14_+_66456138_66456255	0.266847	HIF1A.p2	AK078345|Ccdc25|67179|coiled-coil domain containing 25	NM_145944|Ccdc25|67179|coiled-coil domain containing 25	AK012172|Ccdc25|67179|coiled-coil domain containing 25	AK139180|Ccdc25|67179|coiled-coil domain containing 25	BC025545|Ccdc25|67179|coiled-coil domain containing 25	AK089982|Ccdc25|67179|coiled-coil domain containing 25	AK016286|Ccdc25|67179|coiled-coil domain containing 25	BC148235|Ccdc25|67179|coiled-coil domain containing 25	BC128015|Ccdc25|67179|coiled-coil domain containing 25
mm9_v1_chr3_-_19211000_19211321	0.266269	HIF1A.p2	AY007702|Pde7a|18583|phosphodiesterase 7A	AK154521|Pde7a|18583|phosphodiesterase 7A	BC062909|Pde7a|18583|phosphodiesterase 7A	NM_001122759|Pde7a|18583|phosphodiesterase 7A
mm9_v1_chr10_-_79896086_79896137	0.266205	HIF1A.p2	AF352579|Tcf3|21423|transcription factor 3
mm9_v1_chr11_+_86940545_86940631	0.266193	HIF1A.p2	AK140822|Trim37|68729|tripartite motif-containing 37	BC058678|Trim37|68729|tripartite motif-containing 37	NM_197987|Trim37|68729|tripartite motif-containing 37	BC078416|Trim37|68729|tripartite motif-containing 37	BC059070|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr11_+_78002569_78002838	0.264832	HIF1A.p2	BC038638|Rab34|19376|RAB34, member of RAS oncogene family	AB232630|Rab34|19376|RAB34, member of RAS oncogene family	AF322068|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chr18_+_77168765_77168895	0.2647	HIF1A.p2	NM_025409|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK004281|Ier3ip1|66191|immediate early response 3 interacting protein 1	BC021512|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007388|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007862|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK009116|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK182132|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK190140|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK210106|Ier3ip1|66191|immediate early response 3 interacting protein 1
mm9_v1_chr15_+_98957150_98957201	0.264152	HIF1A.p2	AK159335|Spats2|72572|spermatogenesis associated, serine-rich 2
mm9_v1_chr17_-_35137690_35137738	0.263487	HIF1A.p2	L78788|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5	AK088743|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5
mm9_v1_chr11_+_94491055_94491166	0.262879	HIF1A.p2	AK159374|Lrrc59|98238|leucine rich repeat containing 59	AK159552|Lrrc59|98238|leucine rich repeat containing 59	AK166576|Lrrc59|98238|leucine rich repeat containing 59	AK053450|Lrrc59|98238|leucine rich repeat containing 59	BC006877|Lrrc59|98238|leucine rich repeat containing 59	NM_133807|Lrrc59|98238|leucine rich repeat containing 59	AK169390|Lrrc59|98238|leucine rich repeat containing 59	BC066172|Lrrc59|98238|leucine rich repeat containing 59	AK167604|Lrrc59|98238|leucine rich repeat containing 59	AK169250|Lrrc59|98238|leucine rich repeat containing 59
mm9_v1_chr4_+_128670474_128670574	0.262275	HIF1A.p2	AK050133|Ak2|11637|adenylate kinase 2	AK167797|Ak2|11637|adenylate kinase 2	NM_001033966|Ak2|11637|adenylate kinase 2	AK168148|Ak2|11637|adenylate kinase 2	AB020202|Ak2|11637|adenylate kinase 2	AK168056|Ak2|11637|adenylate kinase 2	AK010936|Ak2|11637|adenylate kinase 2	AK010951|Ak2|11637|adenylate kinase 2	AK077519|Ak2|11637|adenylate kinase 2	BC008610|Ak2|11637|adenylate kinase 2	NM_016895|Ak2|11637|adenylate kinase 2	AK166976|Ak2|11637|adenylate kinase 2
mm9_v1_chr8_-_98412271_98412300	0.262139	HIF1A.p2	AK098166|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK167767|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	BC089015|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK155075|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK149886|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK149926|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK136556|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK152921|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chr9_-_44226073_44226112	0.261634	HIF1A.p2	BC096560|Ccdc84|382073|coiled-coil domain containing 84	BC055929|Ccdc84|382073|coiled-coil domain containing 84	NM_201372|Ccdc84|382073|coiled-coil domain containing 84	AK171754|Ccdc84|382073|coiled-coil domain containing 84	AK052757|Ccdc84|382073|coiled-coil domain containing 84	BC116877|Ccdc84|382073|coiled-coil domain containing 84	BC116879|Ccdc84|382073|coiled-coil domain containing 84	BC144712|Ccdc84|382073|coiled-coil domain containing 84	BC144713|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr7_-_28181562_28181590	0.261212	HIF1A.p2	AB055621|Spnb4|80297|spectrin beta 4
mm9_v1_chr7_+_129210847_129210947	0.259219	HIF1A.p2	AK017851|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chrX_-_91787353_91787369	0.258979	HIF1A.p2	AK135452|Maged1|94275|melanoma antigen, family D, 1	AK146867|Maged1|94275|melanoma antigen, family D, 1	AK146908|Maged1|94275|melanoma antigen, family D, 1	AK049660|Maged1|94275|melanoma antigen, family D, 1	AK087937|Maged1|94275|melanoma antigen, family D, 1
mm9_v1_chr18_+_57514370_57514505	0.258826	HIF1A.p2	NM_028447|Prrc1|73137|proline-rich coiled-coil 1	AK004443|Prrc1|73137|proline-rich coiled-coil 1	AK143537|Prrc1|73137|proline-rich coiled-coil 1	AK014139|Prrc1|73137|proline-rich coiled-coil 1	BC014817|Prrc1|73137|proline-rich coiled-coil 1
mm9_v1_chr12_+_8681058_8681080	0.258506	HIF1A.p2	NM_001160219|Pum2|80913|pumilio 2 (Drosophila)	NM_001160220|Pum2|80913|pumilio 2 (Drosophila)	AK147617|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr4_-_126210701_126210715	0.258477	HIF1A.p2	NM_153177|Eif2c4|76850|eukaryotic translation initiation factor 2C, 4	AK030018|Eif2c4|76850|eukaryotic translation initiation factor 2C, 4
mm9_v1_chr18_-_61867246_61867319	0.258155	HIF1A.p2	BC060677|Pcyox1l|240334|prenylcysteine oxidase 1 like	AK050006|Pcyox1l|240334|prenylcysteine oxidase 1 like	NM_172832|Pcyox1l|240334|prenylcysteine oxidase 1 like
mm9_v1_chr6_+_85401450_85401503	0.256487	HIF1A.p2	NM_007638|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)
mm9_v1_chr3_-_58496285_58496330	0.256453	HIF1A.p2	AK139626|Siah2|20439|seven in absentia 2	BC058400|Siah2|20439|seven in absentia 2	NM_009174|Siah2|20439|seven in absentia 2	AK149316|Siah2|20439|seven in absentia 2
mm9_v1_chr8_+_12395518_12395518	0.255843	HIF1A.p2	NM_009233|Sox1|20664|SRY-box containing gene 1
mm9_v1_chr11_-_11937330_11937512	0.254812	HIF1A.p2	AK030727|Grb10|14783|growth factor receptor bound protein 10	BC053842|Grb10|14783|growth factor receptor bound protein 10	AF022072|Grb10|14783|growth factor receptor bound protein 10	AK012646|Grb10|14783|growth factor receptor bound protein 10	AK163841|Grb10|14783|growth factor receptor bound protein 10	AK032927|Grb10|14783|growth factor receptor bound protein 10	NM_010345|Grb10|14783|growth factor receptor bound protein 10	FJ425892|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr2_+_144096752_144096785	0.253933	HIF1A.p2	AK031535|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	AK049565|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	NM_028984|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene
mm9_v1_chr9_+_108594470_108594519	0.253269	HIF1A.p2	AF533977|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	NM_008924|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC080276|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC075623|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha
mm9_v1_chr10_+_82323313_82323353	0.253153	HIF1A.p2	BC020274|Txnrd1|50493|thioredoxin reductase 1	AK177272|Txnrd1|50493|thioredoxin reductase 1	AK180432|Txnrd1|50493|thioredoxin reductase 1	AK184063|Txnrd1|50493|thioredoxin reductase 1	AK185936|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr15_+_81977633_81977746	0.252778	HIF1A.p2	AK155857|Srebf2|20788|sterol regulatory element binding factor 2	AK032847|Srebf2|20788|sterol regulatory element binding factor 2	AK053802|Srebf2|20788|sterol regulatory element binding factor 2	BC069989|Srebf2|20788|sterol regulatory element binding factor 2	BC048071|Srebf2|20788|sterol regulatory element binding factor 2	AK172219|Srebf2|20788|sterol regulatory element binding factor 2	NM_033218|Srebf2|20788|sterol regulatory element binding factor 2	BC026556|Srebf2|20788|sterol regulatory element binding factor 2	BC014730|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr10_+_10869224_10869321	0.252103	HIF1A.p2	AK082160|Shprh|268281|SNF2 histone linker PHD RING helicase	AK053448|Shprh|268281|SNF2 histone linker PHD RING helicase	NM_001077707|Shprh|268281|SNF2 histone linker PHD RING helicase	NM_172937|Shprh|268281|SNF2 histone linker PHD RING helicase	BC055003|Shprh|268281|SNF2 histone linker PHD RING helicase	AK048265|Shprh|268281|SNF2 histone linker PHD RING helicase	AK085285|Shprh|268281|SNF2 histone linker PHD RING helicase	AK011809|Shprh|268281|SNF2 histone linker PHD RING helicase	AY162264|Shprh|268281|SNF2 histone linker PHD RING helicase	AY162266|Shprh|268281|SNF2 histone linker PHD RING helicase
mm9_v1_chr15_+_79963548_79963591	0.25207	HIF1A.p2	BC114637|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	AB088136|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	BC054369|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	NM_025609|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	BC041110|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	BC027054|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1
mm9_v1_chr3_-_129763732_129763824	0.250404	HIF1A.p2	BC046776|Sec24b|99683|Sec24 related gene family, member B (S. cerevisiae)	NM_207209|Sec24b|99683|Sec24 related gene family, member B (S. cerevisiae)
mm9_v1_chr7_+_126937608_126937700	0.250231	HIF1A.p2	AK011486|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene	NM_028129|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene	AK084640|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene	BC053445|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene	NM_001004187|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene
mm9_v1_chr11_-_68505223_68505271	0.250213	HIF1A.p2	AK020381|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr5_-_20387886_20387948	0.250007	HIF1A.p2	AK152951|Phtf2|68770|putative homeodomain transcription factor 2	AK035536|Phtf2|68770|putative homeodomain transcription factor 2	AK042382|Phtf2|68770|putative homeodomain transcription factor 2	NM_172992|Phtf2|68770|putative homeodomain transcription factor 2
mm9_v1_chr15_+_9001008_9001083	0.250003	HIF1A.p2	AK046666|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene	NM_001040395|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene	NM_001085410|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr19_+_7131270_7131299	0.249559	HIF1A.p2	AK052998|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr15_+_74551611_74551685	0.24915	HIF1A.p2	BC047266|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene	NM_198607|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chr6_+_54545104_54545338	0.24885	HIF1A.p2	AK078040|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001164361|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK170592|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chr16_-_5049936_5049986	0.248159	HIF1A.p2	BC006893|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK014456|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK150349|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK152887|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK151832|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK152586|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK140812|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK141815|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK040841|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK145277|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK031636|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	AK159476|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)
mm9_v1_chr17_+_35272395_35272477	0.247731	HIF1A.p2	BC048137|Bag6|224727|BCL2-associated athanogene 6	BC037051|Bag6|224727|BCL2-associated athanogene 6
mm9_v1_chr18_-_70212948_70213022	0.246812	HIF1A.p2	BC032928|Rab27b|80718|RAB27b, member RAS oncogene family	AB067775|Rab27b|80718|RAB27b, member RAS oncogene family	AF328893|Rab27b|80718|RAB27b, member RAS oncogene family	BC018443|Rab27b|80718|RAB27b, member RAS oncogene family	NM_030554|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr18_-_70632130_70632138	0.246764	HIF1A.p2	AK037066|4930503L19Rik|269033|RIKEN cDNA 4930503L19 gene	NM_172967|4930503L19Rik|269033|RIKEN cDNA 4930503L19 gene
mm9_v1_chr3_+_37538897_37539001	0.24672	HIF1A.p2	AF176903|Spry1|24063|sprouty homolog 1 (Drosophila)	BC051977|Spry1|24063|sprouty homolog 1 (Drosophila)
mm9_v1_chr10_+_127759711_127759783	0.246085	HIF1A.p2	AK213625|Cnpy2|56530|canopy 2 homolog (zebrafish)	BC008261|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK007914|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK013568|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK180663|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr9_+_69837253_69837421	0.24591	HIF1A.p2	AK169609|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK054288|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	NM_016787|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK159745|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK014659|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK161116|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	BC012670|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AF035207|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr14_-_119105434_119105469	0.245583	HIF1A.p2	NM_001033336|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	NM_001163676|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm9_v1_chr5_+_135644171_135644241	0.245458	HIF1A.p2	NM_009745|Bcl7b|12054|B-cell CLL/lymphoma 7B
mm9_v1_chrX_-_92640149_92640178	0.244236	HIF1A.p2	BC053442|Fam123b|72345|family with sequence similarity 123, member B	AK012651|Fam123b|72345|family with sequence similarity 123, member B	AK049774|Fam123b|72345|family with sequence similarity 123, member B	NM_175179|Fam123b|72345|family with sequence similarity 123, member B
mm9_v1_chr11_-_50244605_50244617	0.243923	HIF1A.p2	AK046633|Rufy1|216724|RUN and FYVE domain containing 1	NM_172557|Rufy1|216724|RUN and FYVE domain containing 1	AK051178|Rufy1|216724|RUN and FYVE domain containing 1
mm9_v1_chr2_-_158054870_158054968	0.243546	HIF1A.p2	BC137959|D630003M21Rik|228846|RIKEN cDNA D630003M21 gene	BC137960|D630003M21Rik|228846|RIKEN cDNA D630003M21 gene	AK052605|D630003M21Rik|228846|RIKEN cDNA D630003M21 gene	NM_001131021|D630003M21Rik|228846|RIKEN cDNA D630003M21 gene	NM_177657|D630003M21Rik|228846|RIKEN cDNA D630003M21 gene	AK168367|D630003M21Rik|228846|RIKEN cDNA D630003M21 gene
mm9_v1_chr19_+_53217238_53217304	0.243298	HIF1A.p2	NM_001164100|Add3|27360|adducin 3 (gamma)	AK144174|Add3|27360|adducin 3 (gamma)
mm9_v1_chr10_-_55948481_55948530	0.243234	HIF1A.p2	NM_001033385|D630037F22Rik|544696|RIKEN cDNA D630037F22 gene
mm9_v1_chr5_-_33617477_33617628	0.243218	HIF1A.p2	AK182443|Ctbp1|13016|C-terminal binding protein 1	AK189146|Ctbp1|13016|C-terminal binding protein 1	AJ010483|Ctbp1|13016|C-terminal binding protein 1	BC015071|Ctbp1|13016|C-terminal binding protein 1	AK165276|Ctbp1|13016|C-terminal binding protein 1	AB033122|Ctbp1|13016|C-terminal binding protein 1	AK133816|Ctbp1|13016|C-terminal binding protein 1	BC042425|Ctbp1|13016|C-terminal binding protein 1
mm9_v1_chr11_-_106349097_106349184	0.242806	HIF1A.p2	AB031332|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	NM_023913|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK077041|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK170988|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK018505|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK083891|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK080709|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1
mm9_v1_chr14_+_12386043_12386066	0.242654	HIF1A.p2	BC079595|Ptprg|19270|protein tyrosine phosphatase, receptor type, G	NM_008981|Ptprg|19270|protein tyrosine phosphatase, receptor type, G
mm9_v1_chr1_-_90174043_90174209	0.241958	HIF1A.p2	AB162219|Hjurp|381280|Holliday junction recognition protein	AK138428|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	BC100379|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	AK133997|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	BC057309|Hjurp|381280|Holliday junction recognition protein	BC131919|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	AK042589|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	AK137562|6430706D22Rik|78605|RIKEN cDNA 6430706D22 gene	NM_172505|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	BC004768|Hjurp|381280|Holliday junction recognition protein	NM_198652|Hjurp|381280|Holliday junction recognition protein
mm9_v1_chr1_+_60466568_60466597	0.240841	HIF1A.p2	BC079545|Abi2|329165|abl-interactor 2
mm9_v1_chr5_+_32000312_32000424	0.240707	HIF1A.p2	AK156929|Bre|107976|brain and reproductive organ-expressed protein	AK020047|Bre|107976|brain and reproductive organ-expressed protein	BC061000|Bre|107976|brain and reproductive organ-expressed protein	AK050695|Bre|107976|brain and reproductive organ-expressed protein	AK080991|Bre|107976|brain and reproductive organ-expressed protein	AK166884|Bre|107976|brain and reproductive organ-expressed protein	AF440752|Bre|107976|brain and reproductive organ-expressed protein	AF527952|Bre|107976|brain and reproductive organ-expressed protein	AF527953|Bre|107976|brain and reproductive organ-expressed protein	AF527954|Bre|107976|brain and reproductive organ-expressed protein	AF527955|Bre|107976|brain and reproductive organ-expressed protein	AF538925|Bre|107976|brain and reproductive organ-expressed protein	NM_144541|Bre|107976|brain and reproductive organ-expressed protein	NM_181279|Bre|107976|brain and reproductive organ-expressed protein	NM_181280|Bre|107976|brain and reproductive organ-expressed protein	NM_181281|Bre|107976|brain and reproductive organ-expressed protein	NM_181282|Bre|107976|brain and reproductive organ-expressed protein
mm9_v1_chr19_+_60887452_60887529	0.240697	HIF1A.p2	NM_001167829|Fam45a|67894|family with sequence similarity 45, member A	NM_026437|Fam45a|67894|family with sequence similarity 45, member A	AK004643|Fam45a|67894|family with sequence similarity 45, member A	AK168474|Fam45a|67894|family with sequence similarity 45, member A	AK171767|Fam45a|67894|family with sequence similarity 45, member A	AK145769|Fam45a|67894|family with sequence similarity 45, member A	AK007867|Fam45a|67894|family with sequence similarity 45, member A	BC013514|Fam45a|67894|family with sequence similarity 45, member A	AK202624|Fam45a|67894|family with sequence similarity 45, member A
mm9_v1_chr15_-_98364606_98364733	0.239579	HIF1A.p2	BC125631|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	BC125633|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	BC145047|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	NM_133714|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	BC003301|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK046649|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK162714|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK167429|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK168499|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK089025|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK150748|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK151604|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK152604|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK153007|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	BC011085|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene
mm9_v1_chr16_-_8637591_8637803	0.239511	HIF1A.p2	AK013147|Tmem186|66690|transmembrane protein 186	BC027261|Tmem186|66690|transmembrane protein 186	AK009236|Tmem186|66690|transmembrane protein 186	AK013277|Tmem186|66690|transmembrane protein 186	AK033686|Tmem186|66690|transmembrane protein 186	BC058268|Tmem186|66690|transmembrane protein 186	AK159727|Tmem186|66690|transmembrane protein 186	AK159782|Tmem186|66690|transmembrane protein 186	AK014478|Tmem186|66690|transmembrane protein 186	NM_025708|Tmem186|66690|transmembrane protein 186	AK088656|Tmem186|66690|transmembrane protein 186
mm9_v1_chr8_+_93432505_93432512	0.239491	HIF1A.p2	AK084000|Chd9|109151|chromodomain helicase DNA binding protein 9
mm9_v1_chr19_+_47253657_47253740	0.238483	HIF1A.p2	AF400063|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr19_+_6984613_6984666	0.23823	HIF1A.p2	AK002791|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	AK003292|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	BC019418|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)
mm9_v1_chr15_+_76174029_76174095	0.238094	HIF1A.p2	AK192516|Cyc1|66445|cytochrome c-1
mm9_v1_chr5_-_20561610_20561764	0.237954	HIF1A.p2	X63440|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	BC051980|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	NM_011203|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	AK154107|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12
mm9_v1_chr8_+_127246038_127246102	0.237392	HIF1A.p2	AK004398|Arv1|68865|ARV1 homolog (yeast)	NM_026855|Arv1|68865|ARV1 homolog (yeast)	BC119376|Arv1|68865|ARV1 homolog (yeast)	BC120631|Arv1|68865|ARV1 homolog (yeast)	BC144875|Arv1|68865|ARV1 homolog (yeast)	BC144876|Arv1|68865|ARV1 homolog (yeast)
mm9_v1_chrX_-_98417753_98417901	0.237213	HIF1A.p2	AK168604|Snx12|55988|sorting nexin 12	AK011257|Snx12|55988|sorting nexin 12	AK170403|Snx12|55988|sorting nexin 12	AK049561|Snx12|55988|sorting nexin 12	AK146833|Snx12|55988|sorting nexin 12	AF062484|Snx12|55988|sorting nexin 12	BC002009|Snx12|55988|sorting nexin 12	AK148235|Snx12|55988|sorting nexin 12	AK169569|Snx12|55988|sorting nexin 12	AK170992|Snx12|55988|sorting nexin 12	AK131838|Snx12|55988|sorting nexin 12	NM_001110310|Snx12|55988|sorting nexin 12	NM_001110311|Snx12|55988|sorting nexin 12	NM_018875|Snx12|55988|sorting nexin 12
mm9_v1_chr8_-_87956665_87956752	0.236368	HIF1A.p2	BC050139|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK169408|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	BC027027|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK017512|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK014959|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	NM_025722|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene
mm9_v1_chr11_-_74982551_74982653	0.235212	HIF1A.p2	AF036334|Hic1|15248|hypermethylated in cancer 1
mm9_v1_chr5_-_100467887_100467935	0.234976	HIF1A.p2	BC021374|Hnrpdl|50926|heterogeneous nuclear ribonucleoprotein D-like	AK172629|Hnrpdl|50926|heterogeneous nuclear ribonucleoprotein D-like	AK011581|Hnrpdl|50926|heterogeneous nuclear ribonucleoprotein D-like	AK011767|Hnrpdl|50926|heterogeneous nuclear ribonucleoprotein D-like
mm9_v1_chr17_-_27075896_27076239	0.234637	HIF1A.p2	AK181681|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK187338|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC037500|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC021463|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)
mm9_v1_chr12_-_86113816_86113911	0.233985	HIF1A.p2	AB021289|Npc2|67963|Niemann Pick type C2	AK149805|Npc2|67963|Niemann Pick type C2	AK151067|Npc2|67963|Niemann Pick type C2	AK154838|Npc2|67963|Niemann Pick type C2	AK008603|Npc2|67963|Niemann Pick type C2	AK151133|Npc2|67963|Niemann Pick type C2	AK152236|Npc2|67963|Niemann Pick type C2	AK153020|Npc2|67963|Niemann Pick type C2	AK153203|Npc2|67963|Niemann Pick type C2	AK167869|Npc2|67963|Niemann Pick type C2	AK170327|Npc2|67963|Niemann Pick type C2	BC003471|Npc2|67963|Niemann Pick type C2	AK165263|Npc2|67963|Niemann Pick type C2	AK009127|Npc2|67963|Niemann Pick type C2	AK159154|Npc2|67963|Niemann Pick type C2	BC007190|Npc2|67963|Niemann Pick type C2	AK012239|Npc2|67963|Niemann Pick type C2
mm9_v1_chr10_-_119913990_119913990	0.233484	HIF1A.p2	NM_010441|Hmga2|15364|high mobility group AT-hook 2
mm9_v1_chr1_-_36425967_36426001	0.232594	HIF1A.p2	AK014565|4632411B12Rik|226976|RIKEN cDNA 4632411B12 gene	AK129329|4632411B12Rik|226976|RIKEN cDNA 4632411B12 gene
mm9_v1_chr14_+_76814750_76814782	0.232144	HIF1A.p2	AK173322|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr8_-_94879643_94879671	0.232109	HIF1A.p2	AK181465|4933436C20Rik|71296|RIKEN cDNA 4933436C20 gene
mm9_v1_chr15_-_36212839_36212867	0.232052	HIF1A.p2	AK082665|Rnf19a|30945|ring finger protein 19A
mm9_v1_chr16_-_9995626_9995652	0.231978	HIF1A.p2	
mm9_v1_chr16_-_36071600_36071716	0.231127	HIF1A.p2	AK009946|Fam162a|70186|family with sequence similarity 162, member A	NM_027342|Fam162a|70186|family with sequence similarity 162, member A	BC010826|Fam162a|70186|family with sequence similarity 162, member A	AK033568|Fam162a|70186|family with sequence similarity 162, member A
mm9_v1_chr2_+_32390780_32390878	0.230226	HIF1A.p2	AK131145|Fam102a|98952|family with sequence similarity 102, member A	AK170536|Fam102a|98952|family with sequence similarity 102, member A	AK049032|Fam102a|98952|family with sequence similarity 102, member A	NM_153560|Fam102a|98952|family with sequence similarity 102, member A
mm9_v1_chr17_-_7152648_7152744	0.229852	HIF1A.p2	AK005904|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	AK016473|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	AK161285|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	AK006083|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	NM_001083945|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)	AK076872|Rsph3b|100037282|radial spoke 3B homolog (Chlamydomonas)
mm9_v1_chr9_+_110034489_110034583	0.229056	HIF1A.p2	NM_009211|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK143485|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK144122|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK133922|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U85614|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK144631|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK145352|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK042194|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC056375|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC052423|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC053064|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC022173|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm9_v1_chr17_-_24346171_24346241	0.228957	HIF1A.p2	AF128866|Ntn3|18209|netrin 3	AK141856|Ntn3|18209|netrin 3
mm9_v1_chr16_+_58670444_58670490	0.227832	HIF1A.p2	AK166512|Cpox|12892|coproporphyrinogen oxidase	BC017680|Cpox|12892|coproporphyrinogen oxidase
mm9_v1_chr16_+_18249036_18249160	0.22772	HIF1A.p2	AK146391|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC046976|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC027431|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK034102|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK080170|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK133844|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151422|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK153190|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK169240|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK150482|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151311|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151725|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151778|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152055|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152201|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152363|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152548|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152903|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK153043|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC038486|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
mm9_v1_chr5_-_137774729_137774738	0.227323	HIF1A.p2	BC046982|Slc12a9|83704|solute carrier family 12 (potassium/chloride transporters), member 9
mm9_v1_chr11_-_68787314_68787359	0.22603	HIF1A.p2	BC087921|Rangrf|57785|RAN guanine nucleotide release factor	NM_001101644|Gm4535|100043585|predicted gene 4535	NM_021329|Rangrf|57785|RAN guanine nucleotide release factor	AF243512|Rangrf|57785|RAN guanine nucleotide release factor	BC038470|Rangrf|57785|RAN guanine nucleotide release factor	AK010288|Rangrf|57785|RAN guanine nucleotide release factor
mm9_v1_chr12_+_60232417_60232447	0.225379	HIF1A.p2	AK157358|Ctage5|217615|CTAGE family, member 5	NM_001165253|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr1_+_82313139_82313186	0.223734	HIF1A.p2	NM_029777|Rhbdd1|76867|rhomboid domain containing 1	AK142277|Rhbdd1|76867|rhomboid domain containing 1	AK029751|Rhbdd1|76867|rhomboid domain containing 1
mm9_v1_chr3_+_60806667_60806845	0.222197	HIF1A.p2	AK030759|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	AK036611|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	NM_008772|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	AK033660|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	BC138634|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	BC138635|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1
mm9_v1_chr15_+_58247016_58247063	0.222079	HIF1A.p2	AK137324|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	NM_145959|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	BC070426|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed
mm9_v1_chr10_-_79896386_79896387	0.221942	HIF1A.p2	AK146786|Tcf3|21423|transcription factor 3
mm9_v1_chr5_+_74489078_74489151	0.221542	HIF1A.p2	AK045300|2700023E23Rik|70036|RIKEN cDNA 2700023E23 gene	AK172090|2700023E23Rik|70036|RIKEN cDNA 2700023E23 gene	AK012278|2700023E23Rik|70036|RIKEN cDNA 2700023E23 gene	AK172703|2700023E23Rik|70036|RIKEN cDNA 2700023E23 gene
mm9_v1_chr2_+_121239744_121239768	0.221422	HIF1A.p2	BC033439|Pdia3|14827|protein disulfide isomerase associated 3
mm9_v1_chr14_-_20902310_20902393	0.221304	HIF1A.p2	BC027644|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK031748|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK007941|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK015650|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	NM_026209|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene
mm9_v1_chr4_+_150229178_150229242	0.221268	HIF1A.p2	AK004851|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK166791|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK167359|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK168797|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK139780|Errfi1|74155|ERBB receptor feedback inhibitor 1	BC005546|Errfi1|74155|ERBB receptor feedback inhibitor 1	NM_133753|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK167156|Errfi1|74155|ERBB receptor feedback inhibitor 1
mm9_v1_chr18_-_35114004_35114004	0.221235	HIF1A.p2	BC052727|Hspa9|15526|heat shock protein 9	BC057343|Hspa9|15526|heat shock protein 9	NM_010481|Hspa9|15526|heat shock protein 9
mm9_v1_chr1_-_75502814_75502969	0.22007	HIF1A.p2	AK029863|Obsl1|98733|obscurin-like 1	AK162473|Obsl1|98733|obscurin-like 1	AK034852|Obsl1|98733|obscurin-like 1
mm9_v1_chr16_-_32003226_32003372	0.219311	HIF1A.p2	AK158338|Senp5|320213|SUMO/sentrin specific peptidase 5	AY522918|Senp5|320213|SUMO/sentrin specific peptidase 5	BC080830|Senp5|320213|SUMO/sentrin specific peptidase 5	AK043171|Senp5|320213|SUMO/sentrin specific peptidase 5	AK042087|Senp5|320213|SUMO/sentrin specific peptidase 5	AK028177|Senp5|320213|SUMO/sentrin specific peptidase 5	NM_177103|Senp5|320213|SUMO/sentrin specific peptidase 5
mm9_v1_chr13_+_101421285_101421367	0.219011	HIF1A.p2	NM_027139|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_027592|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC042723|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK012905|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC019453|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC108348|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr3_-_95686120_95686174	0.21843	HIF1A.p2	AK156084|Gm129|229599|predicted gene 129	AK164001|Gm129|229599|predicted gene 129	NM_001033302|Gm129|229599|predicted gene 129
mm9_v1_chr13_+_51196154_51196300	0.218052	HIF1A.p2	AK168544|Spin1|20729|spindlin 1	NM_146043|Spin1|20729|spindlin 1	BC016517|Spin1|20729|spindlin 1	AK134259|Spin1|20729|spindlin 1
mm9_v1_chr1_-_95375363_95375369	0.217596	HIF1A.p2	BC023806|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr6_+_149090037_149090167	0.217314	HIF1A.p2	AK160463|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK029471|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC046911|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC065807|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	NM_177101|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK077292|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC048711|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK132096|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene
mm9_v1_chr17_-_24615972_24616025	0.217291	HIF1A.p2	AF237676|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK002751|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK083731|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	BC015279|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK048102|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK038515|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK077680|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK088951|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK040100|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	NM_019988|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm9_v1_chr10_+_79317396_79317408	0.216893	HIF1A.p2	BC066210|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr17_-_41071432_41071526	0.216595	HIF1A.p2	BC018524|Cenpq|83815|centromere protein Q	AK076094|Cenpq|83815|centromere protein Q	AK011998|Cenpq|83815|centromere protein Q	AK012179|Cenpq|83815|centromere protein Q	AK020040|Cenpq|83815|centromere protein Q	NM_031863|Cenpq|83815|centromere protein Q	AK157569|Cenpq|83815|centromere protein Q
mm9_v1_chr6_-_134516930_134517009	0.216113	HIF1A.p2	BC060704|Lrp6|16974|low density lipoprotein receptor-related protein 6	NM_008514|Lrp6|16974|low density lipoprotein receptor-related protein 6
mm9_v1_chr10_+_42894504_42894509	0.215982	HIF1A.p2	AK018547|9030612E09Rik|74530|RIKEN cDNA 9030612E09 gene	AK029173|9030612E09Rik|74530|RIKEN cDNA 9030612E09 gene	NM_172419|9030612E09Rik|74530|RIKEN cDNA 9030612E09 gene
mm9_v1_chr5_-_34000478_34000532	0.214358	HIF1A.p2	BC094042|Tmem129|68366|transmembrane protein 129	NM_026698|Tmem129|68366|transmembrane protein 129	BC029088|Tmem129|68366|transmembrane protein 129	AK002836|Tmem129|68366|transmembrane protein 129
mm9_v1_chr9_-_56008828_56008912	0.214159	HIF1A.p2	AK159621|Tspan3|56434|tetraspanin 3	AK159324|Tspan3|56434|tetraspanin 3	AK169068|Tspan3|56434|tetraspanin 3	BC043072|Tspan3|56434|tetraspanin 3	AK146130|Tspan3|56434|tetraspanin 3	AK168231|Tspan3|56434|tetraspanin 3	NM_019793|Tspan3|56434|tetraspanin 3
mm9_v1_chr14_-_70205184_70205341	0.21395	HIF1A.p2	AK081100|Rhobtb2|246710|Rho-related BTB domain containing 2	AK122354|Rhobtb2|246710|Rho-related BTB domain containing 2	BC026836|Rhobtb2|246710|Rho-related BTB domain containing 2
mm9_v1_chr5_-_53060929_53060974	0.213872	HIF1A.p2	BC062133|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	AK033654|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	NM_172490|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	AK049338|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	AK153792|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
mm9_v1_chr16_+_26105371_26105398	0.213477	HIF1A.p2	
mm9_v1_chr1_-_99557957_99557974	0.213378	HIF1A.p2	BC034088|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed
mm9_v1_chr19_+_8972607_8972625	0.213118	HIF1A.p2	AK166150|Ganab|14376|alpha glucosidase 2 alpha neutral subunit
mm9_v1_chr4_+_106584314_106584344	0.213095	HIF1A.p2	BC003430|Ssbp3|72475|single-stranded DNA binding protein 3	AF500117|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr8_+_34763918_34764151	0.212729	HIF1A.p2	AK040136|Gsr|14782|glutathione reductase	X76341|Gsr|14782|glutathione reductase	AK159678|Gsr|14782|glutathione reductase	AK019177|Gsr|14782|glutathione reductase	AK159218|Gsr|14782|glutathione reductase	AK151063|Gsr|14782|glutathione reductase	AK151247|Gsr|14782|glutathione reductase	AK152873|Gsr|14782|glutathione reductase	AK084328|Gsr|14782|glutathione reductase	AK167393|Gsr|14782|glutathione reductase	AK151674|Gsr|14782|glutathione reductase
mm9_v1_chr18_+_10325174_10325177	0.212528	HIF1A.p2	AK142556|Greb1l|381157|growth regulation by estrogen in breast cancer-like	NM_001083628|Greb1l|381157|growth regulation by estrogen in breast cancer-like
mm9_v1_chrX_+_20235512_20235607	0.212496	HIF1A.p2	AK088057|Uba1|22201|ubiquitin-like modifier activating enzyme 1	AK088528|Uba1|22201|ubiquitin-like modifier activating enzyme 1	NM_009457|Uba1|22201|ubiquitin-like modifier activating enzyme 1	BC145984|Uba1|22201|ubiquitin-like modifier activating enzyme 1	BC138200|Uba1|22201|ubiquitin-like modifier activating enzyme 1	D10576|Uba1|22201|ubiquitin-like modifier activating enzyme 1
mm9_v1_chr11_-_57614906_57614978	0.212069	HIF1A.p2	AK007998|2010001A14Rik|76516|RIKEN cDNA 2010001A14 gene
mm9_v1_chr8_+_90642636_90642724	0.211944	HIF1A.p2	NM_029074|Tmem188|382030|transmembrane protein 188	AK146578|Tmem188|382030|transmembrane protein 188	BC018498|Tmem188|382030|transmembrane protein 188	AK017198|Tmem188|382030|transmembrane protein 188	BC094385|Tmem188|382030|transmembrane protein 188	BC118981|Tmem188|382030|transmembrane protein 188	BC148291|Tmem188|382030|transmembrane protein 188
mm9_v1_chr1_+_42908077_42908173	0.211847	HIF1A.p2	NM_023514|Mrps9|69527|mitochondrial ribosomal protein S9	AK049465|Mrps9|69527|mitochondrial ribosomal protein S9	AK144656|Mrps9|69527|mitochondrial ribosomal protein S9	AK150985|Mrps9|69527|mitochondrial ribosomal protein S9	AK031497|Mrps9|69527|mitochondrial ribosomal protein S9	AK009082|Mrps9|69527|mitochondrial ribosomal protein S9	BC116437|Mrps9|69527|mitochondrial ribosomal protein S9
mm9_v1_chr2_+_25188246_25188306	0.211663	HIF1A.p2	NM_001029983|Man1b1|227619|mannosidase, alpha, class 1B, member 1	AK043541|Man1b1|227619|mannosidase, alpha, class 1B, member 1	BC138550|Man1b1|227619|mannosidase, alpha, class 1B, member 1	BC138551|Man1b1|227619|mannosidase, alpha, class 1B, member 1
mm9_v1_chr13_-_101322672_101322676	0.211519	HIF1A.p2	U49185|Ocln|18260|occludin
mm9_v1_chr7_+_54051432_54051635	0.210638	HIF1A.p2	NM_008186|Gtf2h1|14884|general transcription factor II H, polypeptide 1	AK005065|Gtf2h1|14884|general transcription factor II H, polypeptide 1	AK182163|Gtf2h1|14884|general transcription factor II H, polypeptide 1	AK185521|Gtf2h1|14884|general transcription factor II H, polypeptide 1
mm9_v1_chr6_-_134847832_134848056	0.209771	HIF1A.p2	NM_001167695|Gpr19|14760|G protein-coupled receptor 19	NM_001167696|Gpr19|14760|G protein-coupled receptor 19	BC021648|Gpr19|14760|G protein-coupled receptor 19	AK132917|Gpr19|14760|G protein-coupled receptor 19	AK140770|Gpr19|14760|G protein-coupled receptor 19	AK160688|Gpr19|14760|G protein-coupled receptor 19	NM_001167693|Gpr19|14760|G protein-coupled receptor 19	NM_001167694|Gpr19|14760|G protein-coupled receptor 19	NM_001167700|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr8_-_122082340_122082342	0.20965	HIF1A.p2	AK002809|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr3_-_105604199_105604320	0.209127	HIF1A.p2	AK152504|Rap1a|109905|RAS-related protein-1a	AK030897|Rap1a|109905|RAS-related protein-1a	BC051419|Rap1a|109905|RAS-related protein-1a	NM_145541|Rap1a|109905|RAS-related protein-1a
mm9_v1_chr2_-_58210162_58210168	0.208597	HIF1A.p2	AK142396|Acvr1c|269275|activin A receptor, type IC	NM_001111030|Acvr1c|269275|activin A receptor, type IC
mm9_v1_chr7_+_106683983_106683997	0.207781	HIF1A.p2	AK147508|Arrb1|109689|arrestin, beta 1	NM_177231|Arrb1|109689|arrestin, beta 1	NM_178220|Arrb1|109689|arrestin, beta 1
mm9_v1_chr13_-_94269762_94269770	0.20774	HIF1A.p2	AK141957|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr18_+_50212935_50213173	0.207716	HIF1A.p2	NM_134131|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK087478|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK090350|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK090316|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK150965|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK149901|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK150445|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK151622|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK152426|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	BC009090|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8
mm9_v1_chr3_-_132346782_132346852	0.206996	HIF1A.p2	AK133859|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	AK160506|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	U10118|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	AK036573|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	AK087932|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	BC002054|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	AK050571|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	NM_007926|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
mm9_v1_chr8_+_37157910_37157939	0.206389	HIF1A.p2	AK036672|D8Ertd82e|244418|DNA segment, Chr 8, ERATO Doi 82, expressed	AK052494|D8Ertd82e|244418|DNA segment, Chr 8, ERATO Doi 82, expressed	AK089749|D8Ertd82e|244418|DNA segment, Chr 8, ERATO Doi 82, expressed
mm9_v1_chr11_-_77978936_77979062	0.205916	HIF1A.p2	AK178796|Traf4|22032|TNF receptor associated factor 4	AF233449|Traf4|22032|TNF receptor associated factor 4	AK035056|Traf4|22032|TNF receptor associated factor 4	AK040877|Traf4|22032|TNF receptor associated factor 4	BC020455|Traf4|22032|TNF receptor associated factor 4	AK053900|Traf4|22032|TNF receptor associated factor 4	NM_009423|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr11_-_98010872_98010958	0.205798	HIF1A.p2	AK220232|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK161566|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK144786|Fbxl20|72194|F-box and leucine-rich repeat protein 20	NM_028149|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK012109|Fbxl20|72194|F-box and leucine-rich repeat protein 20
mm9_v1_chr2_-_168780756_168780798	0.205663	HIF1A.p2	U49046|Zfp64|22722|zinc finger protein 64	AK012527|Zfp64|22722|zinc finger protein 64	BC004695|Zfp64|22722|zinc finger protein 64	AK146036|Zfp64|22722|zinc finger protein 64	AK010444|Zfp64|22722|zinc finger protein 64
mm9_v1_chr2_+_112219335_112219462	0.205494	HIF1A.p2	AK036861|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	NM_024254|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK168639|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK049599|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK151464|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK010654|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK152570|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC003216|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC012402|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC080661|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK162183|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene
mm9_v1_chr19_-_5771326_5771432	0.205344	HIF1A.p2	BC034519|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK144134|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK019240|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK134356|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK161813|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AF276514|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	NM_023912|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK145869|Scyl1|78891|SCY1-like 1 (S. cerevisiae)
mm9_v1_chr13_-_58486515_58486599	0.205265	HIF1A.p2	AK052253|2210016F16Rik|70153|RIKEN cDNA 2210016F16 gene	NM_027335|2210016F16Rik|70153|RIKEN cDNA 2210016F16 gene
mm9_v1_chr9_+_77602337_77602341	0.20453	HIF1A.p2	AK143228|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	AK144339|Gclc|14629|glutamate-cysteine ligase, catalytic subunit
mm9_v1_chr10_-_77472501_77472567	0.20384	HIF1A.p2	NM_008826|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr10_+_43298969_43299042	0.20374	HIF1A.p2	AK014279|Cd24a|12484|CD24a antigen	NM_009846|Cd24a|12484|CD24a antigen	AK133869|Cd24a|12484|CD24a antigen	AK168111|Cd24a|12484|CD24a antigen	AK169613|Cd24a|12484|CD24a antigen	BC026702|Cd24a|12484|CD24a antigen	M58661|Cd24a|12484|CD24a antigen	BC075622|Cd24a|12484|CD24a antigen	X53825|Cd24a|12484|CD24a antigen
mm9_v1_chr18_-_52689279_52689397	0.20359	HIF1A.p2	AK159199|Lox|16948|lysyl oxidase	AK159263|Lox|16948|lysyl oxidase	AK166386|Lox|16948|lysyl oxidase	BC018439|Lox|16948|lysyl oxidase	AK141995|Lox|16948|lysyl oxidase	NM_010728|Lox|16948|lysyl oxidase
mm9_v1_chr19_+_7131234_7131258	0.203251	HIF1A.p2	NM_134147|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr3_+_89856713_89856975	0.202915	HIF1A.p2	NM_025762|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	NM_027500|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK034749|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150324|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150423|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150831|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151002|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151263|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK017833|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC018438|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK051238|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC027190|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK214769|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AY533135|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr13_+_35833181_35833351	0.201638	HIF1A.p2	BC062123|Cdyl|12593|chromodomain protein, Y chromosome-like	AK156509|Cdyl|12593|chromodomain protein, Y chromosome-like	NM_001123386|Cdyl|12593|chromodomain protein, Y chromosome-like
mm9_v1_chr7_+_19589395_19589469	0.201542	HIF1A.p2	AK087457|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK031834|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	BC036162|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	NM_178757|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK032010|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1
mm9_v1_chr7_+_3581586_3581660	0.199478	HIF1A.p2	AK033190|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	NM_001159714|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	NM_027328|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK012987|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AY040823|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK005294|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	BC018376|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK033283|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK051260|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	BC061461|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	BC057877|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK044457|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)
mm9_v1_chr3_-_144232768_144232936	0.199311	HIF1A.p2	AF169243|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	AF060178|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	BC059008|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr17_-_56896933_56896960	0.198424	HIF1A.p2	BC057993|Nrtn|18188|neurturin	NM_008738|Nrtn|18188|neurturin	U78109|Nrtn|18188|neurturin
mm9_v1_chr2_+_155343787_155343801	0.198266	HIF1A.p2	AK029262|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK003738|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK028586|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK093831|Acss2|60525|acyl-CoA synthetase short-chain family member 2
mm9_v1_chr13_-_117814079_117814204	0.197999	HIF1A.p2	AK150732|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK151510|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK152919|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK153169|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK153270|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK150113|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	BC021881|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK149889|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK149918|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK150208|Parp8|52552|poly (ADP-ribose) polymerase family, member 8
mm9_v1_chr2_-_30329737_30329744	0.197673	HIF1A.p2	AK034055|Ier5l|72500|immediate early response 5-like
mm9_v1_chr2_-_13977502_13977510	0.197429	HIF1A.p2	AK010119|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	AK076818|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
mm9_v1_chr8_-_35209773_35209872	0.197169	HIF1A.p2	AK159401|Leprotl1|68192|leptin receptor overlapping transcript-like 1	BC004677|Leprotl1|68192|leptin receptor overlapping transcript-like 1	NM_026609|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK003329|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK153277|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK075740|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK150289|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK154712|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK013870|Leprotl1|68192|leptin receptor overlapping transcript-like 1
mm9_v1_chr5_-_52581615_52581700	0.197098	HIF1A.p2	BC144759|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AF017153|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK167927|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr16_-_26105869_26105946	0.196933	HIF1A.p2	AJ430350|Leprel1|210530|leprecan-like 1	NM_173379|Leprel1|210530|leprecan-like 1
mm9_v1_chr3_-_40886908_40886954	0.196035	HIF1A.p2	BC044759|Pgrmc2|70804|progesterone receptor membrane component 2	AX775753|Pgrmc2|70804|progesterone receptor membrane component 2	AK140064|Pgrmc2|70804|progesterone receptor membrane component 2
mm9_v1_chr17_-_6987100_6987128	0.195903	HIF1A.p2	AK002766|Ezr|22350|ezrin	AK168410|Ezr|22350|ezrin	AK172336|Ezr|22350|ezrin	AK004588|Ezr|22350|ezrin	AK135194|Ezr|22350|ezrin	AK135353|Ezr|22350|ezrin	AK159717|Ezr|22350|ezrin	AK159824|Ezr|22350|ezrin	AK159937|Ezr|22350|ezrin	AK166191|Ezr|22350|ezrin	AK168840|Ezr|22350|ezrin	AK170610|Ezr|22350|ezrin	AK145707|Ezr|22350|ezrin	NM_009510|Ezr|22350|ezrin
mm9_v1_chr11_-_60034046_60034130	0.195802	HIF1A.p2	AK154424|Srebf1|20787|sterol regulatory element binding transcription factor 1	BC056922|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK150052|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK052628|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK169607|Srebf1|20787|sterol regulatory element binding transcription factor 1	NM_011480|Srebf1|20787|sterol regulatory element binding transcription factor 1
mm9_v1_chr11_-_86621130_86621161	0.19555	HIF1A.p2	AK029935|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK010512|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_026191|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr17_-_26005645_26005674	0.195353	HIF1A.p2	BC024332|Fam195a|68241|family with sequence similarity 195, member A
mm9_v1_chr8_+_23970006_23970020	0.19519	HIF1A.p2	AK028058|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK082463|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	NM_001081149|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK039615|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK036885|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK054322|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK132474|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK143408|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3
mm9_v1_chr8_+_109674517_109674597	0.195026	HIF1A.p2	BC054749|Cyb5b|66427|cytochrome b5 type B	BC062980|Cyb5b|66427|cytochrome b5 type B	AK003333|Cyb5b|66427|cytochrome b5 type B	AK088970|Cyb5b|66427|cytochrome b5 type B	AK165543|Cyb5b|66427|cytochrome b5 type B	AK052810|Cyb5b|66427|cytochrome b5 type B	NM_025558|Cyb5b|66427|cytochrome b5 type B	AK019263|Cyb5b|66427|cytochrome b5 type B	BC048147|Cyb5b|66427|cytochrome b5 type B	AK003815|Cyb5b|66427|cytochrome b5 type B	AK168422|Cyb5b|66427|cytochrome b5 type B	AK166544|Cyb5b|66427|cytochrome b5 type B	BC046810|Cyb5b|66427|cytochrome b5 type B	BC046479|Cyb5b|66427|cytochrome b5 type B	BC058812|Cyb5b|66427|cytochrome b5 type B
mm9_v1_chr9_-_123626642_123626742	0.193652	HIF1A.p2	AK046515|Lztfl1|93730|leucine zipper transcription factor-like 1	BC037045|Lztfl1|93730|leucine zipper transcription factor-like 1	AJ297352|Lztfl1|93730|leucine zipper transcription factor-like 1	BC098224|Lztfl1|93730|leucine zipper transcription factor-like 1	BC026840|Lztfl1|93730|leucine zipper transcription factor-like 1	NM_033322|Lztfl1|93730|leucine zipper transcription factor-like 1	AK054003|Lztfl1|93730|leucine zipper transcription factor-like 1	AK157770|Lztfl1|93730|leucine zipper transcription factor-like 1	AK145263|Lztfl1|93730|leucine zipper transcription factor-like 1	AK030068|Lztfl1|93730|leucine zipper transcription factor-like 1	AK029671|Lztfl1|93730|leucine zipper transcription factor-like 1	AK041091|Lztfl1|93730|leucine zipper transcription factor-like 1	AK147312|Lztfl1|93730|leucine zipper transcription factor-like 1
mm9_v1_chr17_-_25031989_25032041	0.19319	HIF1A.p2	BC092228|Eme2|193838|essential meiotic endonuclease 1 homolog 2 (S. pombe)	AK012738|Eme2|193838|essential meiotic endonuclease 1 homolog 2 (S. pombe)	NM_001163102|Eme2|193838|essential meiotic endonuclease 1 homolog 2 (S. pombe)
mm9_v1_chr2_+_131036131_131036175	0.193119	HIF1A.p2	AK009634|2310035K24Rik|69596|RIKEN cDNA 2310035K24 gene	AK002807|2310035K24Rik|69596|RIKEN cDNA 2310035K24 gene	BC048399|2310035K24Rik|69596|RIKEN cDNA 2310035K24 gene	NM_027129|2310035K24Rik|69596|RIKEN cDNA 2310035K24 gene
mm9_v1_chr5_-_75440586_75440675	0.192322	HIF1A.p2	BC048435|Chic2|74277|cysteine-rich hydrophobic domain 2	AK172289|Chic2|74277|cysteine-rich hydrophobic domain 2	AK006962|Chic2|74277|cysteine-rich hydrophobic domain 2	NM_028850|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chr2_-_73052356_73052476	0.191943	HIF1A.p2	AK199282|Ola1|67059|Obg-like ATPase 1	AK017803|Ola1|67059|Obg-like ATPase 1	AK019142|Ola1|67059|Obg-like ATPase 1	BC029207|Ola1|67059|Obg-like ATPase 1	BC011318|Ola1|67059|Obg-like ATPase 1	AK010817|Ola1|67059|Obg-like ATPase 1	AK167458|Ola1|67059|Obg-like ATPase 1	AK159873|Ola1|67059|Obg-like ATPase 1	AK170982|Ola1|67059|Obg-like ATPase 1	AK012998|Ola1|67059|Obg-like ATPase 1
mm9_v1_chr15_-_53177711_53177759	0.191807	HIF1A.p2	AK132327|Ext1|14042|exostoses (multiple) 1	NM_010162|Ext1|14042|exostoses (multiple) 1
mm9_v1_chr2_-_168567244_168567299	0.191512	HIF1A.p2	BC094551|Atp9a|11981|ATPase, class II, type 9A	BC021814|Atp9a|11981|ATPase, class II, type 9A	NM_015731|Atp9a|11981|ATPase, class II, type 9A
mm9_v1_chr10_+_93103936_93104198	0.190774	HIF1A.p2	AF281278|Ntn4|57764|netrin 4	BC119182|Ntn4|57764|netrin 4	BC119184|Ntn4|57764|netrin 4	AF268066|Ntn4|57764|netrin 4
mm9_v1_chr17_-_14340738_14340837	0.190376	HIF1A.p2	AK041604|Dact2|240025|dapper homolog 2, antagonist of beta-catenin (xenopus)	AK082856|Dact2|240025|dapper homolog 2, antagonist of beta-catenin (xenopus)	BC058740|Dact2|240025|dapper homolog 2, antagonist of beta-catenin (xenopus)	AK141226|Dact2|240025|dapper homolog 2, antagonist of beta-catenin (xenopus)	NM_172826|Dact2|240025|dapper homolog 2, antagonist of beta-catenin (xenopus)
mm9_v1_chr12_+_103366928_103366945	0.190278	HIF1A.p2	AK044368|Slc24a4|238384|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	AK044239|Slc24a4|238384|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm9_v1_chr5_-_111209468_111209636	0.190129	HIF1A.p2	BC021446|Pus1|56361|pseudouridine synthase 1	BC034359|Pus1|56361|pseudouridine synthase 1	AB041563|Pus1|56361|pseudouridine synthase 1	AK089258|Pus1|56361|pseudouridine synthase 1	NM_001025561|Pus1|56361|pseudouridine synthase 1	NM_019700|Pus1|56361|pseudouridine synthase 1	NM_001025562|Pus1|56361|pseudouridine synthase 1	AK161521|Pus1|56361|pseudouridine synthase 1
mm9_v1_chr15_+_89284554_89284573	0.189167	HIF1A.p2	AF310135|Mapk8ip2|60597|mitogen-activated protein kinase 8 interacting protein 2	BC029704|Mapk8ip2|60597|mitogen-activated protein kinase 8 interacting protein 2
mm9_v1_chr7_-_30033397_30033450	0.188891	HIF1A.p2	AK033738|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene	BC086934|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene	AK008617|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene
mm9_v1_chr11_-_95375552_95375640	0.188723	HIF1A.p2	AK038955|Nxph3|104079|neurexophilin 3	BC007167|Nxph3|104079|neurexophilin 3
mm9_v1_chr11_+_98011055_98011069	0.18857	HIF1A.p2	
mm9_v1_chr2_+_155343802_155343802	0.187658	HIF1A.p2	AK085932|Acss2|60525|acyl-CoA synthetase short-chain family member 2
mm9_v1_chr11_+_80022611_80022825	0.187557	HIF1A.p2	AK028597|Rhot1|59040|ras homolog gene family, member T1	AK078955|Rhot1|59040|ras homolog gene family, member T1	AK138830|Rhot1|59040|ras homolog gene family, member T1	AK041119|Rhot1|59040|ras homolog gene family, member T1	BC055823|Rhot1|59040|ras homolog gene family, member T1	BC058350|Rhot1|59040|ras homolog gene family, member T1	AK053263|Rhot1|59040|ras homolog gene family, member T1	AK043323|Rhot1|59040|ras homolog gene family, member T1	AK141621|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr4_-_155571450_155571620	0.186953	HIF1A.p2	U84407|Agrn|11603|agrin	AY914875|Agrn|11603|agrin	AF190858|Agrn|11603|agrin	AK134826|Agrn|11603|agrin
mm9_v1_chr14_+_31528800_31528932	0.186744	HIF1A.p2	AK154826|Sfmbt1|54650|Scm-like with four mbt domains 1	NM_001166532|Sfmbt1|54650|Scm-like with four mbt domains 1	BC036972|Sfmbt1|54650|Scm-like with four mbt domains 1	AK142330|Sfmbt1|54650|Scm-like with four mbt domains 1	BC018217|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr11_+_101177524_101177765	0.186215	HIF1A.p2	AK140597|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK150939|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK171348|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	NM_011192|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	BC015255|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK156079|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	BC139818|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	D87911|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK178475|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK179381|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK180194|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	CT010198|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	U60330|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3
mm9_v1_chr1_-_37776633_37776680	0.186006	HIF1A.p2	AK039052|2010300C02Rik|72097|RIKEN cDNA 2010300C02 gene	BC072639|2010300C02Rik|72097|RIKEN cDNA 2010300C02 gene	NM_028096|2010300C02Rik|72097|RIKEN cDNA 2010300C02 gene
mm9_v1_chr11_-_120410992_120411040	0.185718	HIF1A.p2	BC025536|Fam195b|192173|family with sequence similarity 195, member B	AK147780|Fam195b|192173|family with sequence similarity 195, member B	NM_001033231|Fam195b|192173|family with sequence similarity 195, member B
mm9_v1_chr12_+_30622876_30622919	0.185626	HIF1A.p2	AK142872|Pxdn|69675|peroxidasin homolog (Drosophila)	NM_181395|Pxdn|69675|peroxidasin homolog (Drosophila)	BC150789|Pxdn|69675|peroxidasin homolog (Drosophila)	AK054255|Pxdn|69675|peroxidasin homolog (Drosophila)	AK163597|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr5_+_124990703_124991022	0.185612	HIF1A.p2	BC131977|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC138294|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC083140|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	NM_019770|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK089965|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AB025218|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK179651|Tmed2|56334|transmembrane emp24 domain trafficking protein 2
mm9_v1_chr12_-_76770488_76770523	0.184906	HIF1A.p2	BC111903|Wdr89|72338|WD repeat domain 89	BC112430|Wdr89|72338|WD repeat domain 89	AK011125|Wdr89|72338|WD repeat domain 89	NM_028203|Wdr89|72338|WD repeat domain 89
mm9_v1_chr17_-_24346280_24346475	0.183517	HIF1A.p2	BC094362|Ntn3|18209|netrin 3	NM_010947|Ntn3|18209|netrin 3	AK083904|Ntn3|18209|netrin 3	BC053038|Ntn3|18209|netrin 3	AK031199|Ntn3|18209|netrin 3
mm9_v1_chr15_+_31531856_31531890	0.183366	HIF1A.p2	NM_026546|Fam173b|68073|family with sequence similarity 173, member B	AK020868|Fam173b|68073|family with sequence similarity 173, member B	AK160923|Fam173b|68073|family with sequence similarity 173, member B	AK003724|Fam173b|68073|family with sequence similarity 173, member B	AK044518|Fam173b|68073|family with sequence similarity 173, member B	BC030179|Fam173b|68073|family with sequence similarity 173, member B
mm9_v1_chr7_-_4397194_4397258	0.183218	HIF1A.p2	AK089458|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK034180|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	BC082583|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK028434|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	NM_175372|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)
mm9_v1_chr4_+_151671335_151671430	0.182017	HIF1A.p2	BC110695|Icmt|57295|isoprenylcysteine carboxyl methyltransferase	AK154135|Icmt|57295|isoprenylcysteine carboxyl methyltransferase	AK154410|Icmt|57295|isoprenylcysteine carboxyl methyltransferase	BC057132|Icmt|57295|isoprenylcysteine carboxyl methyltransferase
mm9_v1_chrX_-_138824873_138824925	0.181713	HIF1A.p2	BC058663|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	AB033885|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	AB033886|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	AB033887|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	AJ243502|Acsl4|50790|acyl-CoA synthetase long-chain family member 4
mm9_v1_chr2_-_72817058_72817114	0.181711	HIF1A.p2	AK132702|Sp3|20687|trans-acting transcription factor 3
mm9_v1_chr9_-_57493393_57493475	0.181634	HIF1A.p2	AK136876|Csk|12988|c-src tyrosine kinase
mm9_v1_chr15_-_34424979_34425004	0.181113	HIF1A.p2	NM_008287|Hrsp12|15473|heat-responsive protein 12
mm9_v1_chr5_+_106305563_106305620	0.180542	HIF1A.p2	AK017693|Zfp326|54367|zinc finger protein 326	AK032801|Zfp326|54367|zinc finger protein 326	BC039041|Zfp326|54367|zinc finger protein 326	NM_018759|Zfp326|54367|zinc finger protein 326	BC005567|Zfp326|54367|zinc finger protein 326	BC037055|Zfp326|54367|zinc finger protein 326	AK146438|Zfp326|54367|zinc finger protein 326	AB012725|Zfp326|54367|zinc finger protein 326
mm9_v1_chr13_-_101322557_101322594	0.180284	HIF1A.p2	AK033532|Ocln|18260|occludin	AK019880|Ocln|18260|occludin	AK145798|Ocln|18260|occludin
mm9_v1_chr11_+_23978110_23978267	0.179786	HIF1A.p2	AK140949|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF051525|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169036|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169037|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK122557|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF186018|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK004395|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK043677|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	BC051418|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr7_-_29096957_29097119	0.179746	HIF1A.p2	AK010832|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	BC010303|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AY551342|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK088074|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK012977|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	BC037056|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK008340|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK008382|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	NM_025616|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK167473|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)
mm9_v1_chr3_+_107081927_107081986	0.179097	HIF1A.p2	AK003358|Hbxip|68576|hepatitis B virus x interacting protein	BC028547|Hbxip|68576|hepatitis B virus x interacting protein
mm9_v1_chr9_+_75862772_75862821	0.179053	HIF1A.p2	BC037381|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	NM_173731|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK141622|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK164164|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm9_v1_chr17_-_57074707_57074921	0.177977	HIF1A.p2	AF312858|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	BC053005|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	NM_022328|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	AK156820|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	AK144605|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
mm9_v1_chr6_+_65621583_65621630	0.177828	HIF1A.p2	AK049802|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	AK029210|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	NM_172399|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	BC047154|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene
mm9_v1_chr7_-_36181628_36181850	0.177733	HIF1A.p2	BC096687|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK153918|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK082457|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	NM_178643|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK040248|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK031566|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK166481|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene
mm9_v1_chr1_-_69154627_69154642	0.17772	HIF1A.p2	AK144050|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_010154|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
mm9_v1_chr12_+_111839571_111839706	0.177416	HIF1A.p2	NM_030238|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1	AY004877|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1	AK045747|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1	AK052908|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1
mm9_v1_chrX_-_138824941_138824974	0.177261	HIF1A.p2	BC016416|Acsl4|50790|acyl-CoA synthetase long-chain family member 4
mm9_v1_chr19_-_45824047_45824092	0.176615	HIF1A.p2	AK011749|Npm3|18150|nucleoplasmin 3	NM_008723|Npm3|18150|nucleoplasmin 3	U64450|Npm3|18150|nucleoplasmin 3	AK146603|Npm3|18150|nucleoplasmin 3	AK171848|Npm3|18150|nucleoplasmin 3	AK157198|Npm3|18150|nucleoplasmin 3	BC048491|Npm3|18150|nucleoplasmin 3
mm9_v1_chrX_+_20002809_20002842	0.176535	HIF1A.p2	BC065070|Phf16|382207|PHD finger protein 16
mm9_v1_chr17_+_35400983_35401008	0.175492	HIF1A.p2	J00407|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr10_+_85484857_85484907	0.175123	HIF1A.p2	AK219779|Fbxo7|69754|F-box protein 7
mm9_v1_chr17_-_46339543_46339578	0.174837	HIF1A.p2	BC049159|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	BC128366|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	AK036296|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	NM_030715|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	AB027128|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)
mm9_v1_chr8_-_23816962_23817062	0.174761	HIF1A.p2	BC004772|Ikbkb|16150|inhibitor of kappaB kinase beta	BC019210|Ikbkb|16150|inhibitor of kappaB kinase beta	BC037723|Ikbkb|16150|inhibitor of kappaB kinase beta	AK151955|Ikbkb|16150|inhibitor of kappaB kinase beta	AK153151|Ikbkb|16150|inhibitor of kappaB kinase beta	AK150884|Ikbkb|16150|inhibitor of kappaB kinase beta	AK151888|Ikbkb|16150|inhibitor of kappaB kinase beta	AK155587|Ikbkb|16150|inhibitor of kappaB kinase beta	AK011359|Ikbkb|16150|inhibitor of kappaB kinase beta	AK139972|Ikbkb|16150|inhibitor of kappaB kinase beta	AK156294|Ikbkb|16150|inhibitor of kappaB kinase beta	AK144048|Ikbkb|16150|inhibitor of kappaB kinase beta	AK172275|Ikbkb|16150|inhibitor of kappaB kinase beta	AK051128|Ikbkb|16150|inhibitor of kappaB kinase beta	AK053346|Ikbkb|16150|inhibitor of kappaB kinase beta	AK144603|Ikbkb|16150|inhibitor of kappaB kinase beta	AK086442|Ikbkb|16150|inhibitor of kappaB kinase beta	NM_001159774|Ikbkb|16150|inhibitor of kappaB kinase beta	NM_010546|Ikbkb|16150|inhibitor of kappaB kinase beta
mm9_v1_chr11_+_103828032_103828117	0.174537	HIF1A.p2	AK042977|Arf2|11841|ADP-ribosylation factor 2	AK077591|Arf2|11841|ADP-ribosylation factor 2	AK167653|Arf2|11841|ADP-ribosylation factor 2	AK167601|Arf2|11841|ADP-ribosylation factor 2	AK167133|Arf2|11841|ADP-ribosylation factor 2	AK169094|Arf2|11841|ADP-ribosylation factor 2	AK169412|Arf2|11841|ADP-ribosylation factor 2	D87899|Arf2|11841|ADP-ribosylation factor 2	AK031259|Arf2|11841|ADP-ribosylation factor 2
mm9_v1_chr8_+_128258102_128258213	0.17405	HIF1A.p2	AK010823|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	NM_025636|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK019321|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK010229|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK019421|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK086714|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK006433|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	BC025168|Ntpcr|66566|nucleoside-triphosphatase, cancer-related
mm9_v1_chr2_+_116946505_116946906	0.173653	HIF1A.p2	AK155070|Spred1|114715|sprouty protein with EVH-1 domain 1, related sequence	AK155065|Spred1|114715|sprouty protein with EVH-1 domain 1, related sequence
mm9_v1_chr7_-_35841450_35841562	0.173554	HIF1A.p2	AK171859|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	X55499|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AK157391|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AK159544|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AB012273|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	BC011319|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr8_-_89409079_89409204	0.173106	HIF1A.p2	AK134934|N4bp1|80750|NEDD4 binding protein 1	AK172981|N4bp1|80750|NEDD4 binding protein 1	AK147522|N4bp1|80750|NEDD4 binding protein 1	NM_030563|N4bp1|80750|NEDD4 binding protein 1
mm9_v1_chr18_-_67770442_67770527	0.173092	HIF1A.p2	AK129296|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr17_-_15664238_15664282	0.172949	HIF1A.p2	DQ906042|Pdcd2|18567|programmed cell death 2	U10903|Pdcd2|18567|programmed cell death 2	AK045985|Pdcd2|18567|programmed cell death 2	NM_008799|Pdcd2|18567|programmed cell death 2
mm9_v1_chr8_+_127386922_127387009	0.172491	HIF1A.p2	NM_010322|Gnpat|14712|glyceronephosphate O-acyltransferase	AK004771|Gnpat|14712|glyceronephosphate O-acyltransferase	AK010896|Gnpat|14712|glyceronephosphate O-acyltransferase	AK004630|Gnpat|14712|glyceronephosphate O-acyltransferase	AK166997|Gnpat|14712|glyceronephosphate O-acyltransferase	AF110769|Gnpat|14712|glyceronephosphate O-acyltransferase	BC003225|Gnpat|14712|glyceronephosphate O-acyltransferase	AK150810|Gnpat|14712|glyceronephosphate O-acyltransferase	BC025972|Gnpat|14712|glyceronephosphate O-acyltransferase
mm9_v1_chr11_+_54679881_54679983	0.172395	HIF1A.p2	BC070415|Hint1|15254|histidine triad nucleotide binding protein 1	AK012433|Hint1|15254|histidine triad nucleotide binding protein 1	AK002965|Hint1|15254|histidine triad nucleotide binding protein 1	NM_008248|Hint1|15254|histidine triad nucleotide binding protein 1	BC080296|Hint1|15254|histidine triad nucleotide binding protein 1	U60001|Hint1|15254|histidine triad nucleotide binding protein 1
mm9_v1_chr17_-_6987086_6987092	0.171603	HIF1A.p2	BC048181|Ezr|22350|ezrin
mm9_v1_chr14_-_73725576_73725603	0.171182	HIF1A.p2	AK011246|Rb1|19645|retinoblastoma 1	BC096525|Rb1|19645|retinoblastoma 1	NM_009029|Rb1|19645|retinoblastoma 1
mm9_v1_chr4_+_140703843_140703846	0.170992	HIF1A.p2	AK170202|Fbxo42|213499|F-box protein 42	AK171215|Fbxo42|213499|F-box protein 42	BC058667|Fbxo42|213499|F-box protein 42	AK150804|Fbxo42|213499|F-box protein 42
mm9_v1_chr7_-_52689639_52689678	0.170331	HIF1A.p2	AK135404|Ruvbl2|20174|RuvB-like protein 2	AK144156|Ruvbl2|20174|RuvB-like protein 2	BC116693|Ruvbl2|20174|RuvB-like protein 2	BC115809|Ruvbl2|20174|RuvB-like protein 2	AB013912|Ruvbl2|20174|RuvB-like protein 2
mm9_v1_chr3_-_135086338_135086446	0.170163	HIF1A.p2	AK005184|Cisd2|67006|CDGSH iron sulfur domain 2	AK003486|Cisd2|67006|CDGSH iron sulfur domain 2	AK004257|Cisd2|67006|CDGSH iron sulfur domain 2	AK046746|Cisd2|67006|CDGSH iron sulfur domain 2	AK005301|Cisd2|67006|CDGSH iron sulfur domain 2	BC058279|Cisd2|67006|CDGSH iron sulfur domain 2	NM_025902|Cisd2|67006|CDGSH iron sulfur domain 2
mm9_v1_chr13_+_21272294_21272469	0.169964	HIF1A.p2	BC003219|Trim27|19720|tripartite motif-containing 27	AK088180|Trim27|19720|tripartite motif-containing 27	X75343|Trim27|19720|tripartite motif-containing 27
mm9_v1_chr1_-_173211042_173211071	0.169526	HIF1A.p2	D45185|Ppox|19044|protoporphyrinogen oxidase
mm9_v1_chr6_-_112646587_112646665	0.169517	HIF1A.p2	AF205278|Rad18|58186|RAD18 homolog (S. cerevisiae)	BC011120|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK048975|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK028505|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK012795|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK030043|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_001167730|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_021385|Rad18|58186|RAD18 homolog (S. cerevisiae)
mm9_v1_chr9_+_121628258_121628322	0.169321	HIF1A.p2	AK163916|Nktr|18087|natural killer tumor recognition sequence	L04289|Nktr|18087|natural killer tumor recognition sequence	NM_010918|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr8_+_18846524_18846553	0.169159	HIF1A.p2	AK152889|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	AK003649|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	AK170093|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	AK152709|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	BC031987|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
mm9_v1_chrX_-_49034548_49034559	0.168884	HIF1A.p2	BC047151|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2	AK052348|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr17_+_25032050_25032109	0.168633	HIF1A.p2	NM_023260|Mrps34|79044|mitochondrial ribosomal protein S34	AK002285|Mrps34|79044|mitochondrial ribosomal protein S34	AK019922|Mrps34|79044|mitochondrial ribosomal protein S34	AK007337|Mrps34|79044|mitochondrial ribosomal protein S34	AK004049|Mrps34|79044|mitochondrial ribosomal protein S34	BC024336|Mrps34|79044|mitochondrial ribosomal protein S34
mm9_v1_chr9_+_123438903_123439004	0.16823	HIF1A.p2	AK089174|Sacm1l|83493|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	AK171080|Sacm1l|83493|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	AK122390|Sacm1l|83493|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	EF437383|Sacm1l|83493|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	AK161111|Sacm1l|83493|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	NM_030692|Sacm1l|83493|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	AJ297526|Sacm1l|83493|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	BC117752|Sacm1l|83493|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	BC117753|Sacm1l|83493|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)
mm9_v1_chr11_+_98273797_98273840	0.168161	HIF1A.p2	NM_001003817|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK142296|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	BC046811|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	BC053078|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK129487|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm9_v1_chr2_+_152119607_152119757	0.167969	HIF1A.p2	AK076124|Tbc1d20|67231|TBC1 domain family, member 20	NM_024196|Tbc1d20|67231|TBC1 domain family, member 20	AK168985|Tbc1d20|67231|TBC1 domain family, member 20	AK006877|Tbc1d20|67231|TBC1 domain family, member 20	AK085702|Tbc1d20|67231|TBC1 domain family, member 20	AK158274|Tbc1d20|67231|TBC1 domain family, member 20	AK082369|Tbc1d20|67231|TBC1 domain family, member 20	AK172349|Tbc1d20|67231|TBC1 domain family, member 20	BC086617|Tbc1d20|67231|TBC1 domain family, member 20	BC040089|Tbc1d20|67231|TBC1 domain family, member 20	AK036751|Tbc1d20|67231|TBC1 domain family, member 20	AK188394|Tbc1d20|67231|TBC1 domain family, member 20
mm9_v1_chr3_+_94641479_94641499	0.167957	HIF1A.p2	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr9_-_106789330_106789418	0.167927	HIF1A.p2	BC078452|Rbm15b|109095|RNA binding motif protein 15B	NM_175402|Rbm15b|109095|RNA binding motif protein 15B	BC052180|Rbm15b|109095|RNA binding motif protein 15B
mm9_v1_chr19_+_29326204_29326359	0.167383	HIF1A.p2	NM_001048177|Jak2|16452|Janus kinase 2	NM_008413|Jak2|16452|Janus kinase 2	AK087255|Jak2|16452|Janus kinase 2
mm9_v1_chr11_-_75003955_75003987	0.166893	HIF1A.p2	BC044663|Dph1|116905|DPH1 homolog (S. cerevisiae)	BC080761|Dph1|116905|DPH1 homolog (S. cerevisiae)	AK015645|Dph1|116905|DPH1 homolog (S. cerevisiae)	AK128996|Dph1|116905|DPH1 homolog (S. cerevisiae)	AY078170|Dph1|116905|DPH1 homolog (S. cerevisiae)	NM_144491|Dph1|116905|DPH1 homolog (S. cerevisiae)	AK082812|Dph1|116905|DPH1 homolog (S. cerevisiae)
mm9_v1_chr10_-_79862210_79862261	0.166843	HIF1A.p2	AF072248|Mbd3|17192|methyl-CpG binding domain protein 3	NM_013595|Mbd3|17192|methyl-CpG binding domain protein 3
mm9_v1_chr2_+_118752232_118752411	0.166767	HIF1A.p2	NM_028117|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154555|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK155115|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC043700|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154636|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK159357|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK011230|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC085479|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK171614|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC026886|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
mm9_v1_chr15_+_76734500_76734541	0.166512	HIF1A.p2	NM_012053|Rpl8|26961|ribosomal protein L8	AK152063|Rpl8|26961|ribosomal protein L8	AK131970|Rpl8|26961|ribosomal protein L8	AK088263|Rpl8|26961|ribosomal protein L8	AK145498|Rpl8|26961|ribosomal protein L8	AK146330|Rpl8|26961|ribosomal protein L8	AK151408|Rpl8|26961|ribosomal protein L8	AK167775|Rpl8|26961|ribosomal protein L8	AK168332|Rpl8|26961|ribosomal protein L8	AK168769|Rpl8|26961|ribosomal protein L8	U67771|Rpl8|26961|ribosomal protein L8
mm9_v1_chr11_-_90252208_90252214	0.165465	HIF1A.p2	BC058705|Hlf|217082|hepatic leukemia factor
mm9_v1_chr7_-_31741729_31741777	0.1652	HIF1A.p2	AK146871|Usf2|22282|upstream transcription factor 2	AB221562|Usf2|22282|upstream transcription factor 2
mm9_v1_chr4_+_154937914_154937943	0.165187	HIF1A.p2	NM_001159637|Nadk|192185|NAD kinase	AK170608|Nadk|192185|NAD kinase	AK165510|Nadk|192185|NAD kinase	AK170095|Nadk|192185|NAD kinase	AK170960|Nadk|192185|NAD kinase
mm9_v1_chr16_-_18876593_18876775	0.165185	HIF1A.p2	BC028436|Mrpl40|18100|mitochondrial ribosomal protein L40	AK145885|Mrpl40|18100|mitochondrial ribosomal protein L40	AF034092|Mrpl40|18100|mitochondrial ribosomal protein L40	NM_010922|Mrpl40|18100|mitochondrial ribosomal protein L40
mm9_v1_chr12_-_88488272_88488550	0.164939	HIF1A.p2	AK043713|Pomt2|217734|protein-O-mannosyltransferase 2	AK050915|Pomt2|217734|protein-O-mannosyltransferase 2	BC079589|Pomt2|217734|protein-O-mannosyltransferase 2	BC052045|Pomt2|217734|protein-O-mannosyltransferase 2	BC062965|Pomt2|217734|protein-O-mannosyltransferase 2	AY090482|Pomt2|217734|protein-O-mannosyltransferase 2	AF246235|Pomt2|217734|protein-O-mannosyltransferase 2	AK043573|Pomt2|217734|protein-O-mannosyltransferase 2
mm9_v1_chr2_-_181333786_181333936	0.163921	HIF1A.p2	AK053884|Samd10|229011|sterile alpha motif domain containing 10	AK053048|Samd10|229011|sterile alpha motif domain containing 10	BC052921|Samd10|229011|sterile alpha motif domain containing 10	NM_172676|Samd10|229011|sterile alpha motif domain containing 10	AK171151|Samd10|229011|sterile alpha motif domain containing 10	BC019475|Samd10|229011|sterile alpha motif domain containing 10	AK164204|Samd10|229011|sterile alpha motif domain containing 10
mm9_v1_chr10_-_127103595_127103798	0.16296	HIF1A.p2	AK171180|Nab2|17937|Ngfi-A binding protein 2	BC045139|Nab2|17937|Ngfi-A binding protein 2	AK155501|Nab2|17937|Ngfi-A binding protein 2	AK158688|Nab2|17937|Ngfi-A binding protein 2	U47543|Nab2|17937|Ngfi-A binding protein 2	NM_001122895|Nab2|17937|Ngfi-A binding protein 2	NM_008668|Nab2|17937|Ngfi-A binding protein 2
mm9_v1_chr13_+_69750891_69750922	0.161773	HIF1A.p2	NM_145354|Nsun2|28114|NOL1/NOP2/Sun domain family member 2	AK154789|Nsun2|28114|NOL1/NOP2/Sun domain family member 2
mm9_v1_chr12_-_81537525_81537603	0.161571	HIF1A.p2	BC046813|Dcaf5|320808|DDB1 and CUL4 associated factor 5	AK165096|Dcaf5|320808|DDB1 and CUL4 associated factor 5	AK137579|Dcaf5|320808|DDB1 and CUL4 associated factor 5	NM_177267|Dcaf5|320808|DDB1 and CUL4 associated factor 5
mm9_v1_chr5_+_130698192_130698294	0.161459	HIF1A.p2	AK142176|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK171152|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK002297|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK171607|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	BC033455|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene
mm9_v1_chr2_-_131178551_131178627	0.161237	HIF1A.p2	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr1_+_174078297_174078312	0.161144	HIF1A.p2	BC078641|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chr3_+_69525922_69526018	0.161095	HIF1A.p2	AK145248|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK088667|Nmd3|97112|NMD3 homolog (S. cerevisiae)	BC003842|Nmd3|97112|NMD3 homolog (S. cerevisiae)	NM_133787|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK198106|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK166283|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK143289|Nmd3|97112|NMD3 homolog (S. cerevisiae)
mm9_v1_chr7_+_99710002_99710070	0.160203	HIF1A.p2	AK160230|Ccdc90b|66365|coiled-coil domain containing 90B	AK084673|Ccdc90b|66365|coiled-coil domain containing 90B	AK009370|Ccdc90b|66365|coiled-coil domain containing 90B	BC115973|Ccdc90b|66365|coiled-coil domain containing 90B
mm9_v1_chr8_+_23337748_23337837	0.158962	HIF1A.p2	BC029898|Thsd1|56229|thrombospondin, type I, domain 1	AK049636|Thsd1|56229|thrombospondin, type I, domain 1	BC051957|Thsd1|56229|thrombospondin, type I, domain 1	AK052555|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr1_+_93437120_93437389	0.158652	HIF1A.p2	AK153774|Asb1|65247|ankyrin repeat and SOCS box-containing 1	NM_001039126|Asb1|65247|ankyrin repeat and SOCS box-containing 1	BC034869|Asb1|65247|ankyrin repeat and SOCS box-containing 1	AK122456|Asb1|65247|ankyrin repeat and SOCS box-containing 1	AF155352|Asb1|65247|ankyrin repeat and SOCS box-containing 1
mm9_v1_chr5_+_137735875_137735896	0.15691	HIF1A.p2	BC087958|Ufsp1|70240|UFM1-specific peptidase 1	BC016577|Ufsp1|70240|UFM1-specific peptidase 1	AK012343|Ufsp1|70240|UFM1-specific peptidase 1	NM_027356|Ufsp1|70240|UFM1-specific peptidase 1
mm9_v1_chr4_-_56815114_56815205	0.156728	HIF1A.p2	BC052387|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF140786|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK031367|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF367244|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF387811|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK035944|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	NM_026079|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK147153|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein
mm9_v1_chr8_-_81032795_81032797	0.156535	HIF1A.p2	AK149658|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	AK149764|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene
mm9_v1_chr8_+_109127326_109127398	0.156338	HIF1A.p2	X06115|Cdh1|12550|cadherin 1
mm9_v1_chr11_-_70468130_70468151	0.156009	HIF1A.p2	AK011066|Pfn1|18643|profilin 1	AK152491|Pfn1|18643|profilin 1	AK160191|Pfn1|18643|profilin 1	NM_011072|Pfn1|18643|profilin 1
mm9_v1_chr11_-_83881811_83881914	0.155013	HIF1A.p2	BC002130|Dusp14|56405|dual specificity phosphatase 14	AK166230|Dusp14|56405|dual specificity phosphatase 14	AK079362|Dusp14|56405|dual specificity phosphatase 14	NM_019819|Dusp14|56405|dual specificity phosphatase 14	AK163738|Dusp14|56405|dual specificity phosphatase 14
mm9_v1_chr16_-_18248659_18248687	0.155001	HIF1A.p2	L25255|Ranbp1|19385|RAN binding protein 1
mm9_v1_chr2_+_130732201_130732231	0.15481	HIF1A.p2	AK155069|Atrn|11990|attractin	AF116897|Atrn|11990|attractin	NM_009730|Atrn|11990|attractin
mm9_v1_chr14_+_122277941_122277979	0.154731	HIF1A.p2	
mm9_v1_chr1_+_57463594_57463619	0.154044	HIF1A.p2	AK165130|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	AK007831|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	BC071241|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene
mm9_v1_chr10_+_12810593_12810650	0.15362	HIF1A.p2	BC065150|Plagl1|22634|pleiomorphic adenoma gene-like 1	NM_009538|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142210|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142052|Plagl1|22634|pleiomorphic adenoma gene-like 1
mm9_v1_chr7_+_26067559_26067828	0.152915	HIF1A.p2	AF363690|Cic|71722|capicua homolog (Drosophila)
mm9_v1_chr13_+_32893929_32893948	0.152837	HIF1A.p2	AK041886|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr11_-_21271158_21271203	0.152454	HIF1A.p2	AK213550|Ugp2|216558|UDP-glucose pyrophosphorylase 2	BC025585|Ugp2|216558|UDP-glucose pyrophosphorylase 2
mm9_v1_chr4_+_46151601_46151669	0.152182	HIF1A.p2	AK166458|Ncbp1|433702|nuclear cap binding protein subunit 1
mm9_v1_chr9_-_114549261_114549332	0.151967	HIF1A.p2	BC036179|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC039183|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK171701|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK161842|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr2_+_119625463_119625491	0.151522	HIF1A.p2	U05683|Tyro3|22174|TYRO3 protein tyrosine kinase 3	AK141198|Tyro3|22174|TYRO3 protein tyrosine kinase 3
mm9_v1_chr5_+_122872449_122872531	0.151208	HIF1A.p2	NM_019805|Anapc7|56317|anaphase promoting complex subunit 7	AK164202|Anapc7|56317|anaphase promoting complex subunit 7	AF076607|Anapc7|56317|anaphase promoting complex subunit 7	AK030775|Anapc7|56317|anaphase promoting complex subunit 7	AK137286|Anapc7|56317|anaphase promoting complex subunit 7	AK150764|Anapc7|56317|anaphase promoting complex subunit 7	AK150891|Anapc7|56317|anaphase promoting complex subunit 7	AK153114|Anapc7|56317|anaphase promoting complex subunit 7	BC006635|Anapc7|56317|anaphase promoting complex subunit 7	AK049968|Anapc7|56317|anaphase promoting complex subunit 7	AK159523|Anapc7|56317|anaphase promoting complex subunit 7
mm9_v1_chr12_-_60320438_60320474	0.150538	HIF1A.p2	BC020022|Fbxo33|70611|F-box protein 33	NM_001033156|Fbxo33|70611|F-box protein 33
mm9_v1_chr8_-_97437166_97437286	0.150402	HIF1A.p2	BC107374|Ccdc102a|234582|coiled-coil domain containing 102A	BC107375|Ccdc102a|234582|coiled-coil domain containing 102A	BC114992|Ccdc102a|234582|coiled-coil domain containing 102A
mm9_v1_chr5_-_33617631_33617689	0.149951	HIF1A.p2	AK160658|Ctbp1|13016|C-terminal binding protein 1	AK171650|Ctbp1|13016|C-terminal binding protein 1	NM_001198859|Ctbp1|13016|C-terminal binding protein 1	NM_001198860|Ctbp1|13016|C-terminal binding protein 1	NM_001198861|Ctbp1|13016|C-terminal binding protein 1	NM_013502|Ctbp1|13016|C-terminal binding protein 1
mm9_v1_chr2_+_69735301_69735369	0.149395	HIF1A.p2	DQ924536|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_001081548|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_177783|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	AK037622|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3
mm9_v1_chr7_-_134852269_134852320	0.149211	HIF1A.p2	BC005673|Bcl7c|12055|B-cell CLL/lymphoma 7C	NM_009746|Bcl7c|12055|B-cell CLL/lymphoma 7C	AK049064|Bcl7c|12055|B-cell CLL/lymphoma 7C
mm9_v1_chr15_+_55139304_55139473	0.148803	HIF1A.p2	AK017553|Col14a1|12818|collagen, type XIV, alpha 1	NM_181277|Col14a1|12818|collagen, type XIV, alpha 1	AY221110|Col14a1|12818|collagen, type XIV, alpha 1	BC138345|Col14a1|12818|collagen, type XIV, alpha 1	BC145244|Col14a1|12818|collagen, type XIV, alpha 1
mm9_v1_chr12_+_3891743_3891823	0.14869	HIF1A.p2	AF480164|Dnmt3a|13435|DNA methyltransferase 3A	NM_153743|Dnmt3a|13435|DNA methyltransferase 3A	AK157792|Dnmt3a|13435|DNA methyltransferase 3A	AK077792|Dnmt3a|13435|DNA methyltransferase 3A	AK136170|Dnmt3a|13435|DNA methyltransferase 3A
mm9_v1_chr14_-_73109609_73109649	0.148517	HIF1A.p2	BC144880|Fndc3a|319448|fibronectin type III domain containing 3A	AK154756|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr1_-_172104899_172104931	0.147377	HIF1A.p2	BC017547|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK171925|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK163314|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1
mm9_v1_chr11_-_78364173_78364273	0.147135	HIF1A.p2	BC093511|Tmem97|69071|transmembrane protein 97	AK171954|Tmem97|69071|transmembrane protein 97	BC018156|Tmem97|69071|transmembrane protein 97	NM_133706|Tmem97|69071|transmembrane protein 97	AK155107|Tmem97|69071|transmembrane protein 97
mm9_v1_chr13_-_100114593_100114662	0.147045	HIF1A.p2	BC016563|Ptcd2|68927|pentatricopeptide repeat domain 2	BC025110|Ptcd2|68927|pentatricopeptide repeat domain 2	NM_026873|Ptcd2|68927|pentatricopeptide repeat domain 2	AK004502|Ptcd2|68927|pentatricopeptide repeat domain 2	AK144396|Ptcd2|68927|pentatricopeptide repeat domain 2
mm9_v1_chr7_+_152101004_152101187	0.146761	HIF1A.p2	AK046447|Oraov1|72284|oral cancer overexpressed 1	AK008702|Oraov1|72284|oral cancer overexpressed 1	AK083244|Oraov1|72284|oral cancer overexpressed 1	AK169310|Oraov1|72284|oral cancer overexpressed 1	AK167712|Oraov1|72284|oral cancer overexpressed 1	BC013564|Oraov1|72284|oral cancer overexpressed 1	NM_028184|Oraov1|72284|oral cancer overexpressed 1	BC006906|Oraov1|72284|oral cancer overexpressed 1
mm9_v1_chr12_+_8680904_8680950	0.1467	HIF1A.p2	AK134185|Pum2|80913|pumilio 2 (Drosophila)	NM_001160221|Pum2|80913|pumilio 2 (Drosophila)	NM_001160222|Pum2|80913|pumilio 2 (Drosophila)	AK163964|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr2_-_30329717_30329736	0.146646	HIF1A.p2	BC003464|Ier5l|72500|immediate early response 5-like	BC010234|Ier5l|72500|immediate early response 5-like	BC040084|Ier5l|72500|immediate early response 5-like	NM_030244|Ier5l|72500|immediate early response 5-like	AK012145|Ier5l|72500|immediate early response 5-like
mm9_v1_chr5_-_144493077_144493148	0.146108	HIF1A.p2	NM_029749|Usp42|76800|ubiquitin specific peptidase 42
mm9_v1_chr10_+_93661777_93661836	0.146076	HIF1A.p2	AK003131|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK003322|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK008876|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK032774|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK134765|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK153240|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK167943|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
mm9_v1_chr6_-_48395440_48395605	0.145944	HIF1A.p2	AK080480|Zfp467|68910|zinc finger protein 467	AK140205|Zfp467|68910|zinc finger protein 467	BC029859|Zfp467|68910|zinc finger protein 467	AK163508|Zfp467|68910|zinc finger protein 467	BC140975|Zfp467|68910|zinc finger protein 467	AB041616|Zfp467|68910|zinc finger protein 467
mm9_v1_chr12_+_79850007_79850054	0.145874	HIF1A.p2	AF199008|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC138624|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr8_-_72758275_72758364	0.145661	HIF1A.p2	BC048396|Armc6|76813|armadillo repeat containing 6	BC043070|Armc6|76813|armadillo repeat containing 6	BC055779|Armc6|76813|armadillo repeat containing 6	NM_133972|Armc6|76813|armadillo repeat containing 6	AK010815|Armc6|76813|armadillo repeat containing 6	AK081550|Armc6|76813|armadillo repeat containing 6
mm9_v1_chr19_+_5088537_5088585	0.145623	HIF1A.p2	AK011071|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	AK077329|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	NM_026553|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	AK160409|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)
mm9_v1_chr1_-_129574328_129574371	0.145547	HIF1A.p2	AK011522|Tmem163|72160|transmembrane protein 163	AK047006|Tmem163|72160|transmembrane protein 163	AK042650|Tmem163|72160|transmembrane protein 163
mm9_v1_chr7_+_57033711_57033769	0.145283	HIF1A.p2	AK010534|Prmt3|71974|protein arginine N-methyltransferase 3	AK031738|Prmt3|71974|protein arginine N-methyltransferase 3	NM_133740|Prmt3|71974|protein arginine N-methyltransferase 3	AK155236|Prmt3|71974|protein arginine N-methyltransferase 3	AK008118|Prmt3|71974|protein arginine N-methyltransferase 3	AK049836|Prmt3|71974|protein arginine N-methyltransferase 3	BC050775|Prmt3|71974|protein arginine N-methyltransferase 3	AK086646|Prmt3|71974|protein arginine N-methyltransferase 3
mm9_v1_chr2_+_83484686_83484734	0.144421	HIF1A.p2	AK050782|Zc3h15|69082|zinc finger CCCH-type containing 15	BC031845|Zc3h15|69082|zinc finger CCCH-type containing 15	NM_026934|Zc3h15|69082|zinc finger CCCH-type containing 15
mm9_v1_chr1_-_99558252_99558259	0.143931	HIF1A.p2	AK137265|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed
mm9_v1_chr11_+_74584328_74584437	0.143794	HIF1A.p2	AK013306|Mett10d|67493|methyltransferase 10 domain containing	BC022902|Mett10d|67493|methyltransferase 10 domain containing	AK145022|Mett10d|67493|methyltransferase 10 domain containing	AK011780|Mett10d|67493|methyltransferase 10 domain containing	AK012739|Mett10d|67493|methyltransferase 10 domain containing	NM_026197|Mett10d|67493|methyltransferase 10 domain containing	AK145662|Mett10d|67493|methyltransferase 10 domain containing	AK029045|Mett10d|67493|methyltransferase 10 domain containing	AK161574|Mett10d|67493|methyltransferase 10 domain containing	BC003467|Mett10d|67493|methyltransferase 10 domain containing	AK168798|Mett10d|67493|methyltransferase 10 domain containing	BC037452|Mett10d|67493|methyltransferase 10 domain containing	BC054724|Mett10d|67493|methyltransferase 10 domain containing	BC049897|Mett10d|67493|methyltransferase 10 domain containing
mm9_v1_chr12_+_8681155_8681226	0.143015	HIF1A.p2	AK122225|Pum2|80913|pumilio 2 (Drosophila)	AK141682|Pum2|80913|pumilio 2 (Drosophila)	AY027917|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr13_+_15555483_15555555	0.141414	HIF1A.p2	AK158261|Gli3|14634|GLI-Kruppel family member GLI3	NM_008130|Gli3|14634|GLI-Kruppel family member GLI3
mm9_v1_chr12_-_112723995_112724011	0.140998	HIF1A.p2	AK140917|Gm266|212539|predicted gene 266	AK166394|Gm266|212539|predicted gene 266
mm9_v1_chr3_-_53667683_53667736	0.140997	HIF1A.p2	BC051554|Ufm1|67890|ubiquitin-fold modifier 1	AK008280|Ufm1|67890|ubiquitin-fold modifier 1	AK007788|Ufm1|67890|ubiquitin-fold modifier 1	AK167321|Ufm1|67890|ubiquitin-fold modifier 1	AK148146|Ufm1|67890|ubiquitin-fold modifier 1	AK089948|Ufm1|67890|ubiquitin-fold modifier 1	AK167301|Ufm1|67890|ubiquitin-fold modifier 1	AK011737|Ufm1|67890|ubiquitin-fold modifier 1	AK166332|Ufm1|67890|ubiquitin-fold modifier 1	BC061065|Ufm1|67890|ubiquitin-fold modifier 1	NM_026435|Ufm1|67890|ubiquitin-fold modifier 1
mm9_v1_chr2_+_144096600_144096679	0.140365	HIF1A.p2	AK159286|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	BC063088|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene
mm9_v1_chr1_-_84281018_84281160	0.140232	HIF1A.p2	AK035542|Pid1|98496|phosphotyrosine interaction domain containing 1	AK083256|Pid1|98496|phosphotyrosine interaction domain containing 1	AK150971|Pid1|98496|phosphotyrosine interaction domain containing 1
mm9_v1_chr7_+_134920839_134920910	0.140177	HIF1A.p2	NM_178029|Setd1a|233904|SET domain containing 1A
mm9_v1_chr8_-_112132276_112132319	0.139691	HIF1A.p2	AF029667|Dhodh|56749|dihydroorotate dehydrogenase	BC019542|Dhodh|56749|dihydroorotate dehydrogenase	AK088863|Dhodh|56749|dihydroorotate dehydrogenase	AK149350|Dhodh|56749|dihydroorotate dehydrogenase
mm9_v1_chr2_+_28368766_28368850	0.138553	HIF1A.p2	AK141959|Ralgds|19730|ral guanine nucleotide dissociation stimulator	AK129328|Ralgds|19730|ral guanine nucleotide dissociation stimulator	L07924|Ralgds|19730|ral guanine nucleotide dissociation stimulator
mm9_v1_chr3_-_108218411_108218411	0.138542	HIF1A.p2	AB028499|Celsr2|53883|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	NM_001004177|Celsr2|53883|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	NM_017392|Celsr2|53883|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
mm9_v1_chr1_-_90598670_90598781	0.138473	HIF1A.p2	AK080335|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080380|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080743|Arl4c|320982|ADP-ribosylation factor-like 4C	BC055769|Arl4c|320982|ADP-ribosylation factor-like 4C	NM_177305|Arl4c|320982|ADP-ribosylation factor-like 4C
mm9_v1_chr15_+_97794629_97794751	0.138234	HIF1A.p2	AK134684|Tmem106c|380967|transmembrane protein 106C	BC046621|Tmem106c|380967|transmembrane protein 106C	NM_201359|Tmem106c|380967|transmembrane protein 106C
mm9_v1_chr3_-_144233091_144233106	0.137553	HIF1A.p2	BC025443|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr4_-_126645129_126645179	0.136451	HIF1A.p2	AK148366|Zmym4|67785|zinc finger, MYM-type 4	NM_001114399|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr11_+_120319420_120319456	0.135909	HIF1A.p2	AK156682|Ccdc137|67291|coiled-coil domain containing 137	NM_152807|Ccdc137|67291|coiled-coil domain containing 137	BC026662|Ccdc137|67291|coiled-coil domain containing 137
mm9_v1_chr9_+_50425425_50425450	0.135872	HIF1A.p2	NM_028300|Pih1d2|72614|PIH1 domain containing 2	AK080744|Pih1d2|72614|PIH1 domain containing 2	BC039645|Pih1d2|72614|PIH1 domain containing 2	AK012458|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr14_+_65271350_65271386	0.135823	HIF1A.p2	AK019919|Kif13b|16554|kinesin family member 13B	NM_001081177|Kif13b|16554|kinesin family member 13B	AK031482|Kif13b|16554|kinesin family member 13B
mm9_v1_chr7_+_52253028_52253155	0.134488	HIF1A.p2	AK013944|Irf3|54131|interferon regulatory factor 3	NM_016849|Irf3|54131|interferon regulatory factor 3	AK146378|Irf3|54131|interferon regulatory factor 3	AK151750|Irf3|54131|interferon regulatory factor 3	AK152689|Irf3|54131|interferon regulatory factor 3	U75839|Irf3|54131|interferon regulatory factor 3	AK145977|Irf3|54131|interferon regulatory factor 3	BC023244|Irf3|54131|interferon regulatory factor 3	AK050570|Irf3|54131|interferon regulatory factor 3	BC003233|Irf3|54131|interferon regulatory factor 3	BC050882|Irf3|54131|interferon regulatory factor 3
mm9_v1_chr2_+_158450623_158450686	0.134376	HIF1A.p2	AK046312|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK142980|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	NM_175419|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK046584|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC028806|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC052039|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC037522|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)
mm9_v1_chr6_-_100237390_100237463	0.134335	HIF1A.p2	AK033024|Rybp|56353|RING1 and YY1 binding protein	AF101779|Rybp|56353|RING1 and YY1 binding protein	BC080287|Rybp|56353|RING1 and YY1 binding protein
mm9_v1_chr10_+_82323085_82323203	0.133927	HIF1A.p2	NM_001042514|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr8_+_107115389_107115400	0.133926	HIF1A.p2	BC094946|Pdp2|382051|pyruvate dehyrogenase phosphatase catalytic subunit 2
mm9_v1_chr6_+_65729006_65729018	0.133676	HIF1A.p2	AK021384|Prdm5|70779|PR domain containing 5	BC089598|Prdm5|70779|PR domain containing 5	AK018310|Prdm5|70779|PR domain containing 5
mm9_v1_chr4_+_116230293_116230350	0.132272	HIF1A.p2	AK037224|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK133761|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK019942|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	BC066034|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	NM_029868|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1
mm9_v1_chr16_-_85173918_85173926	0.132158	HIF1A.p2	AK161976|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr17_+_29627697_29627792	0.131814	HIF1A.p2	AK158445|Pim1|18712|proviral integration site 1	BC042885|Pim1|18712|proviral integration site 1
mm9_v1_chr5_-_145726643_145726766	0.130556	HIF1A.p2	AK154491|Smurf1|75788|SMAD specific E3 ubiquitin protein ligase 1	NM_001038627|Smurf1|75788|SMAD specific E3 ubiquitin protein ligase 1	NM_029438|Smurf1|75788|SMAD specific E3 ubiquitin protein ligase 1	BC029097|Smurf1|75788|SMAD specific E3 ubiquitin protein ligase 1
mm9_v1_chr4_+_129190872_129190875	0.13049	HIF1A.p2	AK083913|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr14_+_76245144_76245241	0.130451	HIF1A.p2	BC092381|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr9_+_107457062_107457103	0.130129	HIF1A.p2	AF132851|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1
mm9_v1_chr3_+_98944990_98945019	0.129792	HIF1A.p2	BC089583|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK036902|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK017602|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK042715|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK042964|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	NM_027462|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK033774|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)
mm9_v1_chr17_-_12511525_12511663	0.128497	HIF1A.p2	BC058719|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	NM_011948|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	U85607|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	U85608|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	AK014185|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	AK035823|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	AK133605|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4
mm9_v1_chr12_+_87582805_87582876	0.128367	HIF1A.p2	BC048169|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK031712|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK006185|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	BC058256|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	NM_027405|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK147916|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	BC050782|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK129299|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene
mm9_v1_chr8_+_97125835_97125965	0.128216	HIF1A.p2	NM_026274|Rspry1|67610|ring finger and SPRY domain containing 1	BC054121|Rspry1|67610|ring finger and SPRY domain containing 1	AK150941|Rspry1|67610|ring finger and SPRY domain containing 1	AK152435|Rspry1|67610|ring finger and SPRY domain containing 1	AK172461|Rspry1|67610|ring finger and SPRY domain containing 1	AK166167|Rspry1|67610|ring finger and SPRY domain containing 1	AK151018|Rspry1|67610|ring finger and SPRY domain containing 1	AK152024|Rspry1|67610|ring finger and SPRY domain containing 1	AK156697|Rspry1|67610|ring finger and SPRY domain containing 1	AK146028|Rspry1|67610|ring finger and SPRY domain containing 1	AK172567|Rspry1|67610|ring finger and SPRY domain containing 1	AK032416|Rspry1|67610|ring finger and SPRY domain containing 1	AK141443|Rspry1|67610|ring finger and SPRY domain containing 1
mm9_v1_chr13_-_41315751_41315817	0.127824	HIF1A.p2	AK029855|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	BC098215|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	AF170908|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	NM_019423|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	AK044770|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	AK050397|Elovl2|54326|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm9_v1_chr6_-_83059000_83059052	0.127484	HIF1A.p2	
mm9_v1_chr6_+_147040006_147040062	0.127223	HIF1A.p2	AK048908|Klhdc5|232539|kelch domain containing 5	AK083047|Klhdc5|232539|kelch domain containing 5	AK052765|Klhdc5|232539|kelch domain containing 5
mm9_v1_chr2_-_38781939_38781980	0.126289	HIF1A.p2	U14666|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	NM_010264|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	U09563|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1
mm9_v1_chr5_-_35917699_35917718	0.12613	HIF1A.p2	AK019101|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	BC152332|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	AK046957|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	AK132402|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	NM_030208|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene
mm9_v1_chr4_+_151382993_151383061	0.125495	HIF1A.p2	AK154493|Klhl21|242785|kelch-like 21 (Drosophila)	NM_001033352|Klhl21|242785|kelch-like 21 (Drosophila)	BC060201|Klhl21|242785|kelch-like 21 (Drosophila)	AK052203|Klhl21|242785|kelch-like 21 (Drosophila)	AK158141|Klhl21|242785|kelch-like 21 (Drosophila)	BC141158|Klhl21|242785|kelch-like 21 (Drosophila)	BC141159|Klhl21|242785|kelch-like 21 (Drosophila)
mm9_v1_chr5_+_114222723_114222894	0.125364	HIF1A.p2	AK039834|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	AK157864|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	AK009421|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	AK083247|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	AK009021|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	NM_025526|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	BC048409|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	BC096049|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	BC028800|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)
mm9_v1_chr9_-_94438499_94438504	0.12528	HIF1A.p2	NM_001033145|1190002N15Rik|68861|RIKEN cDNA 1190002N15 gene
mm9_v1_chr4_+_115894231_115894261	0.125145	HIF1A.p2	AK036105|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	AK132341|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	AK163413|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	AK161822|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm9_v1_chr11_-_70513555_70513642	0.124927	HIF1A.p2	BC115572|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1	BC115573|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1	BC096427|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1
mm9_v1_chr15_+_83002779_83002785	0.124047	HIF1A.p2	AK033475|7530414M10Rik|320374|RIKEN cDNA 7530414M10 gene	AK034072|7530414M10Rik|320374|RIKEN cDNA 7530414M10 gene
mm9_v1_chr5_-_92512486_92512611	0.123875	HIF1A.p2	AK153893|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK153221|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK151732|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	NM_001080794|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	NM_001080796|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	BC119806|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	BC122883|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr5_-_144775583_144775788	0.123611	HIF1A.p2	AK213761|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC048077|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_177682|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK090008|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK171671|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK172392|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK146704|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK150793|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152328|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152576|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK153160|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK164888|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
mm9_v1_chr4_-_14753526_14753603	0.123131	HIF1A.p2	BC087552|Otud6b|72201|OTU domain containing 6B	AK172229|Otud6b|72201|OTU domain containing 6B	AK172338|Otud6b|72201|OTU domain containing 6B	BC031474|Otud6b|72201|OTU domain containing 6B	AK011203|Otud6b|72201|OTU domain containing 6B	AK169134|Otud6b|72201|OTU domain containing 6B	AK166546|Otud6b|72201|OTU domain containing 6B	AK144761|Otud6b|72201|OTU domain containing 6B	AK166445|Otud6b|72201|OTU domain containing 6B	AK155761|Otud6b|72201|OTU domain containing 6B
mm9_v1_chr4_-_59562054_59562263	0.123115	HIF1A.p2	BC057641|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	BC006638|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK033732|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK088560|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_144904|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_178164|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)
mm9_v1_chr10_-_80261226_80261370	0.123021	HIF1A.p2	AK088567|Plekhj1|78670|pleckstrin homology domain containing, family J member 1	NM_023900|Plekhj1|78670|pleckstrin homology domain containing, family J member 1
mm9_v1_chr5_+_23670780_23670845	0.122674	HIF1A.p2	AK078478|Nupl2|231042|nucleoporin like 2	NM_153092|Nupl2|231042|nucleoporin like 2	AK077066|Nupl2|231042|nucleoporin like 2	BC033270|Nupl2|231042|nucleoporin like 2
mm9_v1_chr8_-_98412302_98412339	0.122615	HIF1A.p2	BC089341|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK147953|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chr5_+_119010687_119010751	0.12258	HIF1A.p2	AK088795|Med13l|76199|mediator complex subunit 13-like	NM_172424|Med13l|76199|mediator complex subunit 13-like	AK154895|Med13l|76199|mediator complex subunit 13-like	AY338464|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr9_+_120213190_120213236	0.12175	HIF1A.p2	AK083225|Myrip|245049|myosin VIIA and Rab interacting protein	NM_144557|Myrip|245049|myosin VIIA and Rab interacting protein	AK038988|Myrip|245049|myosin VIIA and Rab interacting protein
mm9_v1_chr5_+_31172103_31172117	0.119824	HIF1A.p2	BC026651|Tmem214|68796|transmembrane protein 214
mm9_v1_chr10_+_5959030_5959157	0.119699	HIF1A.p2	AK030936|Zbtb2|381990|zinc finger and BTB domain containing 2	AK160748|Zbtb2|381990|zinc finger and BTB domain containing 2
mm9_v1_chr6_-_115626497_115626580	0.119678	HIF1A.p2	BC092040|Raf1|110157|v-raf-leukemia viral oncogene 1	BC015273|Raf1|110157|v-raf-leukemia viral oncogene 1	AK036317|Raf1|110157|v-raf-leukemia viral oncogene 1	BC056439|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr3_+_86028140_86028161	0.119566	HIF1A.p2	AK052148|Lrba|80877|LPS-responsive beige-like anchor
mm9_v1_chr11_-_107655777_107655857	0.118805	HIF1A.p2	AJ272045|Cacng4|54377|calcium channel, voltage-dependent, gamma subunit 4	NM_019431|Cacng4|54377|calcium channel, voltage-dependent, gamma subunit 4	BC138503|Cacng4|54377|calcium channel, voltage-dependent, gamma subunit 4	BC138506|Cacng4|54377|calcium channel, voltage-dependent, gamma subunit 4
mm9_v1_chr12_-_112724033_112724036	0.118784	HIF1A.p2	BC145736|Gm266|212539|predicted gene 266	BC145762|Gm266|212539|predicted gene 266	NM_001033248|Gm266|212539|predicted gene 266
mm9_v1_chr15_-_73253617_73253652	0.118671	HIF1A.p2	AK220543|Ptk2|14083|PTK2 protein tyrosine kinase 2	NM_001130409|Ptk2|14083|PTK2 protein tyrosine kinase 2	NM_007982|Ptk2|14083|PTK2 protein tyrosine kinase 2	AK005468|Ptk2|14083|PTK2 protein tyrosine kinase 2
mm9_v1_chr8_+_82163574_82163602	0.116962	HIF1A.p2	NM_001081164|Otud4|73945|OTU domain containing 4	BC138373|Otud4|73945|OTU domain containing 4	BC145259|Otud4|73945|OTU domain containing 4
mm9_v1_chr7_-_112884943_112884950	0.116748	HIF1A.p2	AK165828|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK045361|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK170257|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)
mm9_v1_chr1_-_57463517_57463543	0.116464	HIF1A.p2	BC023868|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	NM_001037742|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	NM_001114102|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene
mm9_v1_chr11_+_70658310_70658476	0.116421	HIF1A.p2	AK205489|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AB001750|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	D86066|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC129853|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC129854|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AF248489|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AF248490|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1
mm9_v1_chr6_+_116288073_116288073	0.115754	HIF1A.p2	AK165647|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr14_-_122196929_122196955	0.115749	HIF1A.p2	NM_134074|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr1_-_182186429_182186434	0.115626	HIF1A.p2	AK148111|Psen2|19165|presenilin 2	NM_001128605|Psen2|19165|presenilin 2
mm9_v1_chr1_-_95651403_95651427	0.115274	HIF1A.p2	NM_025920|Thap4|67026|THAP domain containing 4
mm9_v1_chr10_-_122513438_122513438	0.115071	HIF1A.p2	AK161217|Mon2|67074|MON2 homolog (yeast)
mm9_v1_chr3_+_96439352_96439425	0.114802	HIF1A.p2	NM_001162387|Pex11b|18632|peroxisomal biogenesis factor 11 beta	NM_011069|Pex11b|18632|peroxisomal biogenesis factor 11 beta	AK082778|Pex11b|18632|peroxisomal biogenesis factor 11 beta
mm9_v1_chr18_-_58369579_58369752	0.114158	HIF1A.p2	AK132163|Fbn2|14119|fibrillin 2	NM_010181|Fbn2|14119|fibrillin 2
mm9_v1_chr14_+_76245031_76245114	0.113991	HIF1A.p2	NM_009429|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr2_+_34965011_34965138	0.113668	HIF1A.p2	AK041715|Cep110|26920|centrosomal protein 110	NM_012018|Cep110|26920|centrosomal protein 110	AK031338|Cep110|26920|centrosomal protein 110	AK020148|Cep110|26920|centrosomal protein 110	BC038386|Cep110|26920|centrosomal protein 110	BC158010|Cep110|26920|centrosomal protein 110
mm9_v1_chr4_-_136391849_136391926	0.113666	HIF1A.p2	BC043088|Ephb2|13844|Eph receptor B2	NM_010142|Ephb2|13844|Eph receptor B2	BC062924|Ephb2|13844|Eph receptor B2	AK017630|Ephb2|13844|Eph receptor B2	L25890|Ephb2|13844|Eph receptor B2
mm9_v1_chr16_+_24393435_24393655	0.113008	HIF1A.p2	NM_178665|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK168431|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK085626|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051345|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045288|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045341|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051937|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK086307|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK169780|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr17_-_6987068_6987083	0.1123	HIF1A.p2	BC098502|Ezr|22350|ezrin	X60671|Ezr|22350|ezrin
mm9_v1_chr7_+_106683973_106683975	0.112153	HIF1A.p2	AK147566|Arrb1|109689|arrestin, beta 1
mm9_v1_chr12_+_25336138_25336389	0.11126	HIF1A.p2	AK038397|Klf11|194655|Kruppel-like factor 11	AK050156|Klf11|194655|Kruppel-like factor 11	NM_178357|Klf11|194655|Kruppel-like factor 11	BC060642|Klf11|194655|Kruppel-like factor 11	AK161233|Klf11|194655|Kruppel-like factor 11	AK082838|Klf11|194655|Kruppel-like factor 11	AK036618|Klf11|194655|Kruppel-like factor 11	AK089044|Klf11|194655|Kruppel-like factor 11	AK084913|Klf11|194655|Kruppel-like factor 11	AK085319|Klf11|194655|Kruppel-like factor 11	AK054170|Klf11|194655|Kruppel-like factor 11	AJ459773|Klf11|194655|Kruppel-like factor 11
mm9_v1_chr19_-_4615661_4615689	0.110593	HIF1A.p2	NM_153388|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr12_+_75008853_75009062	0.110463	HIF1A.p2	NM_010431|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK034087|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK150367|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK138944|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK017853|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	BC026139|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AF003695|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr5_+_65928483_65928591	0.110426	HIF1A.p2	AK139564|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_016786|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK048194|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK035371|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK018366|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK160728|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK031055|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK036068|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK162142|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB011081|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC085311|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK166647|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
mm9_v1_chr14_-_70553471_70553549	0.109915	HIF1A.p2	AK028194|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene	BC038346|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene
mm9_v1_chr7_-_36103433_36103463	0.109799	HIF1A.p2	BC100577|Gpatch1|67471|G patch domain containing 1	AK154571|Gpatch1|67471|G patch domain containing 1	AK014367|Gpatch1|67471|G patch domain containing 1	BC125584|Gpatch1|67471|G patch domain containing 1	BC132155|Gpatch1|67471|G patch domain containing 1	AK004868|Gpatch1|67471|G patch domain containing 1	NM_026181|Gpatch1|67471|G patch domain containing 1
mm9_v1_chr11_-_76308483_76308518	0.109261	HIF1A.p2	AK052216|Abr|109934|active BCR-related gene
mm9_v1_chr5_-_149806774_149806813	0.108645	HIF1A.p2	AK031217|5930430L01Rik|319982|RIKEN cDNA 5930430L01 gene	AK148051|5930430L01Rik|319982|RIKEN cDNA 5930430L01 gene	AK036974|5930430L01Rik|319982|RIKEN cDNA 5930430L01 gene
mm9_v1_chr7_+_86040793_86040943	0.108113	HIF1A.p2	AK031972|Aen|68048|apoptosis enhancing nuclease	NM_001162939|Aen|68048|apoptosis enhancing nuclease	NM_026531|Aen|68048|apoptosis enhancing nuclease	AK165708|Aen|68048|apoptosis enhancing nuclease	AK012555|Aen|68048|apoptosis enhancing nuclease	AK090056|Aen|68048|apoptosis enhancing nuclease	AK166806|Aen|68048|apoptosis enhancing nuclease	AK167042|Aen|68048|apoptosis enhancing nuclease	AK076421|Aen|68048|apoptosis enhancing nuclease	AK167658|Aen|68048|apoptosis enhancing nuclease	AK017644|Aen|68048|apoptosis enhancing nuclease	AK089090|Aen|68048|apoptosis enhancing nuclease	BC022614|Aen|68048|apoptosis enhancing nuclease
mm9_v1_chr9_-_15162159_15162231	0.107708	HIF1A.p2	NM_176976|5830418K08Rik|319675|RIKEN cDNA 5830418K08 gene
mm9_v1_chr7_+_148653250_148653309	0.107516	HIF1A.p2	NM_001111049|Cd151|12476|CD151 antigen	NM_009842|Cd151|12476|CD151 antigen	D89290|Cd151|12476|CD151 antigen
mm9_v1_chr9_+_103014445_103014461	0.107458	HIF1A.p2	AK035893|Rab6b|270192|RAB6B, member RAS oncogene family
mm9_v1_chr16_+_52031661_52031695	0.107417	HIF1A.p2	NM_001033238|Cblb|208650|Casitas B-lineage lymphoma b	AK147367|Cblb|208650|Casitas B-lineage lymphoma b
mm9_v1_chr11_+_53164384_53164450	0.107212	HIF1A.p2	AK044058|Aff4|93736|AF4/FMR2 family, member 4	AK054401|Aff4|93736|AF4/FMR2 family, member 4
mm9_v1_chr7_+_148477904_148477937	0.107108	HIF1A.p2	BC016086|Drd4|13491|dopamine receptor D4	NM_007878|Drd4|13491|dopamine receptor D4	AK044436|Drd4|13491|dopamine receptor D4	BC051421|Drd4|13491|dopamine receptor D4	AK044379|Drd4|13491|dopamine receptor D4
mm9_v1_chr3_+_28704357_28704400	0.107036	HIF1A.p2	BC120716|Rpl22l1|68028|ribosomal protein L22 like 1	BC120718|Rpl22l1|68028|ribosomal protein L22 like 1
mm9_v1_chr12_+_114336416_114336628	0.106456	HIF1A.p2	BC112910|Mta1|116870|metastasis associated 1	NM_054081|Mta1|116870|metastasis associated 1	AF288137|Mta1|116870|metastasis associated 1	AF463504|Mta1|116870|metastasis associated 1
mm9_v1_chrX_-_68745773_68745833	0.106435	HIF1A.p2	AK166275|Cd99l2|171486|CD99 antigen-like 2	EF516990|Cd99l2|171486|CD99 antigen-like 2	AK031264|Cd99l2|171486|CD99 antigen-like 2	AK080225|Cd99l2|171486|CD99 antigen-like 2	BC031736|Cd99l2|171486|CD99 antigen-like 2	AY078163|Cd99l2|171486|CD99 antigen-like 2	NM_138309|Cd99l2|171486|CD99 antigen-like 2	AK054364|Cd99l2|171486|CD99 antigen-like 2
mm9_v1_chr17_+_79234855_79234969	0.106195	HIF1A.p2	AK148331|Ccdc75|53951|coiled-coil domain containing 75	NM_181649|Ccdc75|53951|coiled-coil domain containing 75	BC092522|Ccdc75|53951|coiled-coil domain containing 75	AK049867|Ccdc75|53951|coiled-coil domain containing 75	BC047998|Ccdc75|53951|coiled-coil domain containing 75	BC138310|Ccdc75|53951|coiled-coil domain containing 75	AK009084|Ccdc75|53951|coiled-coil domain containing 75
mm9_v1_chr13_-_63532777_63533052	0.105082	HIF1A.p2	AK196042|Fancc|14088|Fanconi anemia, complementation group C	AK035488|Fancc|14088|Fanconi anemia, complementation group C	AK042226|Fancc|14088|Fanconi anemia, complementation group C	AK082717|Fancc|14088|Fanconi anemia, complementation group C	AK080697|Fancc|14088|Fanconi anemia, complementation group C	AK147025|Fancc|14088|Fanconi anemia, complementation group C	L08266|Fancc|14088|Fanconi anemia, complementation group C	AK163161|Fancc|14088|Fanconi anemia, complementation group C	NM_001042673|Fancc|14088|Fanconi anemia, complementation group C	NM_007985|Fancc|14088|Fanconi anemia, complementation group C
mm9_v1_chr6_+_114232618_114232629	0.104997	HIF1A.p2	NM_178703|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm9_v1_chr17_+_64950988_64951003	0.104224	HIF1A.p2	NM_008549|Man2a1|17158|mannosidase 2, alpha 1	X61172|Man2a1|17158|mannosidase 2, alpha 1	BC138371|Man2a1|17158|mannosidase 2, alpha 1	BC138372|Man2a1|17158|mannosidase 2, alpha 1
mm9_v1_chr1_+_74331503_74331655	0.103187	HIF1A.p2	AF318058|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116236|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116237|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_001039509|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_025580|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC008274|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC058945|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK012976|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK173125|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK009545|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY039041|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY299972|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK166548|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia
mm9_v1_chr17_+_57129686_57129814	0.102323	HIF1A.p2	NM_017393|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK145765|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	BC001998|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AJ005253|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK004024|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK168053|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK002238|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK147719|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)
mm9_v1_chr19_+_3708309_3708410	0.102072	HIF1A.p2	AK007868|1810055G02Rik|72056|RIKEN cDNA 1810055G02 gene	NM_028077|1810055G02Rik|72056|RIKEN cDNA 1810055G02 gene	AK154828|1810055G02Rik|72056|RIKEN cDNA 1810055G02 gene	BC019471|1810055G02Rik|72056|RIKEN cDNA 1810055G02 gene
mm9_v1_chr19_+_56796861_56797043	0.101906	HIF1A.p2	NM_007419|Adrb1|11554|adrenergic receptor, beta 1	AK018378|Adrb1|11554|adrenergic receptor, beta 1
mm9_v1_chr3_+_157197301_157197382	0.101753	HIF1A.p2	AK150291|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK152536|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168613|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167983|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167766|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC049115|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168162|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169335|Zranb2|53861|zinc finger, RAN-binding domain containing 2	NM_017381|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146275|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK160862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167756|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168033|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC132547|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC138575|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK166534|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169114|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146854|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AF133818|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr9_+_120036883_120036892	0.101658	HIF1A.p2	NM_011029|Rpsa|16785|ribosomal protein SA
mm9_v1_chr6_+_72548583_72548626	0.101431	HIF1A.p2	EF620363|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	EF620364|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	EF620365|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	AY704159|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	BC117751|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	NM_026159|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	BC117750|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)
mm9_v1_chr7_-_16872094_16872145	0.101392	HIF1A.p2	AK134892|Ccdc9|243846|coiled-coil domain containing 9	NM_001136471|Ccdc9|243846|coiled-coil domain containing 9
mm9_v1_chr3_+_94217197_94217322	0.100804	HIF1A.p2	BC057030|Tdrkh|72634|tudor and KH domain containing protein	BC031886|Tdrkh|72634|tudor and KH domain containing protein	BC049363|Tdrkh|72634|tudor and KH domain containing protein	NM_028307|Tdrkh|72634|tudor and KH domain containing protein
mm9_v1_chr7_+_144629356_144629410	0.100607	HIF1A.p2	
mm9_v1_chr14_-_70205351_70205356	0.100441	HIF1A.p2	AK021405|Rhobtb2|246710|Rho-related BTB domain containing 2	NM_153514|Rhobtb2|246710|Rho-related BTB domain containing 2
mm9_v1_chr9_-_90009416_90009657	0.0989604	HIF1A.p2	AK167079|Morf4l1|21761|mortality factor 4 like 1	AK164251|Morf4l1|21761|mortality factor 4 like 1	AK010528|Morf4l1|21761|mortality factor 4 like 1	AK011441|Morf4l1|21761|mortality factor 4 like 1	AK182816|Morf4l1|21761|mortality factor 4 like 1	AK218718|Morf4l1|21761|mortality factor 4 like 1	BC083094|Morf4l1|21761|mortality factor 4 like 1	AK152119|Morf4l1|21761|mortality factor 4 like 1	AK168585|Morf4l1|21761|mortality factor 4 like 1	AK168608|Morf4l1|21761|mortality factor 4 like 1	AK150925|Morf4l1|21761|mortality factor 4 like 1	AK220441|Morf4l1|21761|mortality factor 4 like 1	AK146210|Morf4l1|21761|mortality factor 4 like 1	AK168327|Morf4l1|21761|mortality factor 4 like 1	AK169065|Morf4l1|21761|mortality factor 4 like 1	AK168674|Morf4l1|21761|mortality factor 4 like 1	AB042241|Morf4l1|21761|mortality factor 4 like 1	AF319620|Morf4l1|21761|mortality factor 4 like 1	AF319621|Morf4l1|21761|mortality factor 4 like 1	BC085103|Morf4l1|21761|mortality factor 4 like 1	BC003894|Morf4l1|21761|mortality factor 4 like 1	BC017619|Morf4l1|21761|mortality factor 4 like 1	BC083118|Morf4l1|21761|mortality factor 4 like 1	BC092293|Morf4l1|21761|mortality factor 4 like 1	BC103783|Morf4l1|21761|mortality factor 4 like 1	AK011249|Morf4l1|21761|mortality factor 4 like 1	AK016414|Morf4l1|21761|mortality factor 4 like 1	NM_001039147|Morf4l1|21761|mortality factor 4 like 1	NM_024431|Morf4l1|21761|mortality factor 4 like 1
mm9_v1_chr7_+_148653336_148653358	0.0986056	HIF1A.p2	AK178787|Cd151|12476|CD151 antigen
mm9_v1_chr5_-_33972265_33972318	0.0985885	HIF1A.p2	AK017321|Fam53a|74504|family with sequence similarity 53, member A	NM_178390|Fam53a|74504|family with sequence similarity 53, member A
mm9_v1_chr5_-_144670646_144670709	0.098322	HIF1A.p2	BC026958|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024410|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC026972|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024480|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_001172146|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_146165|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
mm9_v1_chr10_+_127759512_127759609	0.0981871	HIF1A.p2	AF186115|Cnpy2|56530|canopy 2 homolog (zebrafish)	NM_019953|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK150953|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr1_-_174563092_174563154	0.0972934	HIF1A.p2	AB183013|Dusp23|68440|dual specificity phosphatase 23	BC069187|Dusp23|68440|dual specificity phosphatase 23	NM_026725|Dusp23|68440|dual specificity phosphatase 23
mm9_v1_chr7_-_85992096_85992145	0.0970171	HIF1A.p2	BC031930|Det1|76375|de-etiolated homolog 1 (Arabidopsis)	NM_029585|Det1|76375|de-etiolated homolog 1 (Arabidopsis)	AK011666|Det1|76375|de-etiolated homolog 1 (Arabidopsis)
mm9_v1_chr14_+_76245136_76245138	0.0968511	HIF1A.p2	AK149695|Tpt1|22070|tumor protein, translationally-controlled 1	AK150500|Tpt1|22070|tumor protein, translationally-controlled 1	AK151266|Tpt1|22070|tumor protein, translationally-controlled 1	AK151375|Tpt1|22070|tumor protein, translationally-controlled 1	AK151894|Tpt1|22070|tumor protein, translationally-controlled 1	AK152690|Tpt1|22070|tumor protein, translationally-controlled 1	AK159516|Tpt1|22070|tumor protein, translationally-controlled 1	AK165736|Tpt1|22070|tumor protein, translationally-controlled 1	AK167413|Tpt1|22070|tumor protein, translationally-controlled 1	AK167936|Tpt1|22070|tumor protein, translationally-controlled 1	AK168151|Tpt1|22070|tumor protein, translationally-controlled 1	AK150300|Tpt1|22070|tumor protein, translationally-controlled 1	AK150858|Tpt1|22070|tumor protein, translationally-controlled 1	AK151059|Tpt1|22070|tumor protein, translationally-controlled 1	AK152808|Tpt1|22070|tumor protein, translationally-controlled 1	AK159565|Tpt1|22070|tumor protein, translationally-controlled 1	X06407|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr9_+_50412002_50412049	0.0967955	HIF1A.p2	NM_013897|Timm8b|30057|translocase of inner mitochondrial membrane 8 homolog b (yeast)	AF196314|Timm8b|30057|translocase of inner mitochondrial membrane 8 homolog b (yeast)	AK004190|Timm8b|30057|translocase of inner mitochondrial membrane 8 homolog b (yeast)	AK169258|Timm8b|30057|translocase of inner mitochondrial membrane 8 homolog b (yeast)	AK019422|Timm8b|30057|translocase of inner mitochondrial membrane 8 homolog b (yeast)	AK012925|Timm8b|30057|translocase of inner mitochondrial membrane 8 homolog b (yeast)	AK018718|Timm8b|30057|translocase of inner mitochondrial membrane 8 homolog b (yeast)	AK003382|Timm8b|30057|translocase of inner mitochondrial membrane 8 homolog b (yeast)
mm9_v1_chr9_+_20970150_20970317	0.0966546	HIF1A.p2	AK153657|Pde4a|18577|phosphodiesterase 4A, cAMP specific	NM_183408|Pde4a|18577|phosphodiesterase 4A, cAMP specific	BC139405|Pde4a|18577|phosphodiesterase 4A, cAMP specific	BC139408|Pde4a|18577|phosphodiesterase 4A, cAMP specific
mm9_v1_chr17_+_87362612_87362644	0.0964474	HIF1A.p2	AB060650|Rhoq|104215|ras homolog gene family, member Q	BC048813|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chr9_+_108419410_108419495	0.0964418	HIF1A.p2	NM_001114119|Qrich1|69232|glutamine-rich 1	NM_175143|Qrich1|69232|glutamine-rich 1	AK083212|Qrich1|69232|glutamine-rich 1	BC006738|Qrich1|69232|glutamine-rich 1	AK151491|Qrich1|69232|glutamine-rich 1	AK151530|Qrich1|69232|glutamine-rich 1	BC120915|Qrich1|69232|glutamine-rich 1	BC120916|Qrich1|69232|glutamine-rich 1
mm9_v1_chr1_+_75233028_75233040	0.0962236	HIF1A.p2	AK156083|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2	BC085162|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr10_-_84647533_84647834	0.0958983	HIF1A.p2	AF156986|Cry1|12952|cryptochrome 1 (photolyase-like)	BC022174|Cry1|12952|cryptochrome 1 (photolyase-like)	AK162460|Cry1|12952|cryptochrome 1 (photolyase-like)	BC085499|Cry1|12952|cryptochrome 1 (photolyase-like)	NM_007771|Cry1|12952|cryptochrome 1 (photolyase-like)	AK133818|Cry1|12952|cryptochrome 1 (photolyase-like)
mm9_v1_chr7_-_52252911_52252974	0.0953336	HIF1A.p2	AK013411|Bcl2l12|75736|BCL2-like 12 (proline rich)	AK017362|Bcl2l12|75736|BCL2-like 12 (proline rich)	NM_029410|Bcl2l12|75736|BCL2-like 12 (proline rich)
mm9_v1_chr2_+_37307751_37307773	0.0949198	HIF1A.p2	AK044346|Rabgap1|227800|RAB GTPase activating protein 1	NM_001033960|Rabgap1|227800|RAB GTPase activating protein 1
mm9_v1_chr11_-_120657647_120657730	0.0945134	HIF1A.p2	AK147967|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK037538|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK148307|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK088243|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	NM_026824|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)
mm9_v1_chr7_+_116847191_116847288	0.0945084	HIF1A.p2	AK163012|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	AK155010|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	AK086219|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	AK159903|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	NM_020616|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene
mm9_v1_chr13_-_9764376_9764487	0.0943511	HIF1A.p2	BC022945|Zmynd11|66505|zinc finger, MYND domain containing 11	AK077732|Zmynd11|66505|zinc finger, MYND domain containing 11	NM_144516|Zmynd11|66505|zinc finger, MYND domain containing 11
mm9_v1_chr17_-_23965968_23966120	0.0936083	HIF1A.p2	BC056983|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	BC051927|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK152950|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK003277|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK012254|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK019358|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK002868|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	NM_026305|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK008534|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK008477|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK002223|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK019181|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2	AK019218|Tceb2|67673|transcription elongation factor B (SIII), polypeptide 2
mm9_v1_chr5_-_67819037_67819037	0.0934642	HIF1A.p2	NM_001164806|Bend4|666938|BEN domain containing 4
mm9_v1_chr11_+_102137867_102137884	0.0933633	HIF1A.p2	AK038411|Asb16|217217|ankyrin repeat and SOCS box-containing 16
mm9_v1_chr3_-_115710131_115710328	0.0933521	HIF1A.p2	AF529196|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AF233322|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC050193|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC017136|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK075802|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK010008|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	NM_023214|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7
mm9_v1_chr11_+_120645560_120645605	0.0932455	HIF1A.p2	NM_001177874|Gps1|209318|G protein pathway suppressor 1	AK088490|Gps1|209318|G protein pathway suppressor 1
mm9_v1_chr17_-_10512094_10512209	0.0930676	HIF1A.p2	BC053426|Qk|19317|quaking
mm9_v1_chr12_+_79849918_79849954	0.0929109	HIF1A.p2	NM_019579|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr8_-_114434098_114434098	0.0928296	HIF1A.p2	AF176840|Chst5|56773|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5	NM_019950|Chst5|56773|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
mm9_v1_chr14_+_73909826_73909861	0.0924127	HIF1A.p2	AK145636|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK078288|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK010270|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK010686|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	BC024950|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	NM_026119|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)
mm9_v1_chr5_-_33617629_33617630	0.0923643	HIF1A.p2	AK149906|Ctbp1|13016|C-terminal binding protein 1
mm9_v1_chr11_+_98543871_98543951	0.0921334	HIF1A.p2	AK031366|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145467|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145488|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164593|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK169690|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166714|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167005|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164333|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166683|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK089933|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167285|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK077252|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK165520|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK153505|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm9_v1_chr15_+_79177959_79178004	0.0917742	HIF1A.p2	AK156896|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr9_-_114842953_114842992	0.0916667	HIF1A.p2	AK166662|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like	BC037729|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like	AK145475|Gpd1l|333433|glycerol-3-phosphate dehydrogenase 1-like
mm9_v1_chr1_-_194597214_194597412	0.0913176	HIF1A.p2	AK028230|Hhat|226861|hedgehog acyltransferase	AK134661|Hhat|226861|hedgehog acyltransferase	AK172126|Hhat|226861|hedgehog acyltransferase	BC008159|Hhat|226861|hedgehog acyltransferase	NM_144881|Hhat|226861|hedgehog acyltransferase
mm9_v1_chr10_-_33671000_33671074	0.0910006	HIF1A.p2	AK052071|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK160928|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK046191|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK164710|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	NM_028287|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK012263|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	BC089514|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK077730|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK164346|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK077304|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK172184|Zufsp|72580|zinc finger with UFM1-specific peptidase domain
mm9_v1_chr2_-_118982691_118982711	0.0908083	HIF1A.p2	AK004786|Fam82a2|67809|family with sequence similarity 82, member A2
mm9_v1_chr10_+_25079661_25079716	0.0907649	HIF1A.p2	AK170275|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK167434|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	BC023768|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK052475|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr12_+_17182362_17182362	0.090731	HIF1A.p2	AK043920|Kcnf1|382571|potassium voltage-gated channel, subfamily F, member 1
mm9_v1_chr18_-_10182019_10182100	0.090268	HIF1A.p2	AK149793|Rock1|19877|Rho-associated coiled-coil containing protein kinase 1
mm9_v1_chr2_-_154718506_154718641	0.0901363	HIF1A.p2	BC113766|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	BC003848|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK019156|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK143553|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK166862|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK145401|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK012338|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	BC100539|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK076056|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK011503|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK042004|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK166866|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK145434|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	NM_026030|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)
mm9_v1_chr10_+_110910277_110910391	0.090003	HIF1A.p2	AK004633|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK007322|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK136161|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK032896|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK145766|Nap1l1|53605|nucleosome assembly protein 1-like 1	D12618|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK169301|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK152011|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK153531|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK008261|Nap1l1|53605|nucleosome assembly protein 1-like 1
mm9_v1_chr4_+_155186568_155186886	0.0897091	HIF1A.p2	NM_207678|Ccnl2|56036|cyclin L2	AK007552|Ccnl2|56036|cyclin L2	BC132295|Ccnl2|56036|cyclin L2	AK048244|Ccnl2|56036|cyclin L2	AK156037|Ccnl2|56036|cyclin L2	AB041605|Ccnl2|56036|cyclin L2	AY337018|Ccnl2|56036|cyclin L2	AK169857|Ccnl2|56036|cyclin L2	BC023747|Ccnl2|56036|cyclin L2	AF211859|Ccnl2|56036|cyclin L2	AK044204|Ccnl2|56036|cyclin L2	AK008585|Ccnl2|56036|cyclin L2	AK138938|Ccnl2|56036|cyclin L2
mm9_v1_chr19_+_55328128_55328228	0.0896758	HIF1A.p2	AK150542|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK150663|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK145894|Acsl5|433256|acyl-CoA synthetase long-chain family member 5
mm9_v1_chr8_+_107694536_107694875	0.089415	HIF1A.p2	AK089094|Cbfb|12400|core binding factor beta	NM_001161456|Cbfb|12400|core binding factor beta	NM_001161457|Cbfb|12400|core binding factor beta	NM_001161458|Cbfb|12400|core binding factor beta	NM_022309|Cbfb|12400|core binding factor beta	D14570|Cbfb|12400|core binding factor beta	D14571|Cbfb|12400|core binding factor beta	D14572|Cbfb|12400|core binding factor beta	BC026749|Cbfb|12400|core binding factor beta	BC040752|Cbfb|12400|core binding factor beta	BC006763|Cbfb|12400|core binding factor beta	L03305|Cbfb|12400|core binding factor beta	L03306|Cbfb|12400|core binding factor beta
mm9_v1_chr4_-_141795288_141795317	0.089229	HIF1A.p2	AK018497|9030409G11Rik|71529|RIKEN cDNA 9030409G11 gene	AK052809|9030409G11Rik|71529|RIKEN cDNA 9030409G11 gene	NM_001109685|9030409G11Rik|71529|RIKEN cDNA 9030409G11 gene
mm9_v1_chr14_-_32898727_32898850	0.0892248	HIF1A.p2	AK048097|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	BC029910|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	BC039954|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	AK011448|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	AK017764|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	NM_001047433|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	NM_172254|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)
mm9_v1_chr10_-_79785786_79785871	0.0881952	HIF1A.p2	BC052535|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4
mm9_v1_chr19_-_41459518_41459628	0.0881454	HIF1A.p2	BC113141|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AF293806|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	NM_031376|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK087295|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK154326|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK171021|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK170130|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK170925|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK089785|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1
mm9_v1_chr10_-_6373309_6373324	0.0879622	HIF1A.p2	BC058265|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm9_v1_chr9_-_88376937_88377419	0.0876162	HIF1A.p2	BC080309|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC108363|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK083398|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK077588|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC050079|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC055863|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK076026|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AB035725|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK034845|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC041148|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC058807|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_019666|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_019796|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein
mm9_v1_chr14_-_68551487_68551628	0.0875103	HIF1A.p2	AK147975|Dock5|68813|dedicator of cytokinesis 5	BC158046|Dock5|68813|dedicator of cytokinesis 5	BC158135|Dock5|68813|dedicator of cytokinesis 5	BC158138|Dock5|68813|dedicator of cytokinesis 5	AK053909|Dock5|68813|dedicator of cytokinesis 5	NM_177780|Dock5|68813|dedicator of cytokinesis 5
mm9_v1_chrX_-_91368713_91368747	0.0873334	HIF1A.p2	L19714|Zfx|22764|zinc finger protein X-linked	AK145115|Zfx|22764|zinc finger protein X-linked	NM_001044386|Zfx|22764|zinc finger protein X-linked	NM_011768|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr11_-_107656007_107656024	0.0871249	HIF1A.p2	AK144253|Cacng4|54377|calcium channel, voltage-dependent, gamma subunit 4
mm9_v1_chr17_-_45823086_45823135	0.0866966	HIF1A.p2	AK090200|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr4_+_140462254_140462341	0.0863475	HIF1A.p2	NM_008812|Padi2|18600|peptidyl arginine deiminase, type II	AK158382|Padi2|18600|peptidyl arginine deiminase, type II	AK171275|Padi2|18600|peptidyl arginine deiminase, type II	AK148156|Padi2|18600|peptidyl arginine deiminase, type II	AK154814|Padi2|18600|peptidyl arginine deiminase, type II	BC049947|Padi2|18600|peptidyl arginine deiminase, type II	BC040350|Padi2|18600|peptidyl arginine deiminase, type II	D16580|Padi2|18600|peptidyl arginine deiminase, type II
mm9_v1_chr5_-_34979759_34979862	0.0859455	HIF1A.p2	BC023012|Mfsd10|68294|major facilitator superfamily domain containing 10	NM_026660|Mfsd10|68294|major facilitator superfamily domain containing 10	AK194736|Mfsd10|68294|major facilitator superfamily domain containing 10	AK018736|Mfsd10|68294|major facilitator superfamily domain containing 10	AK089055|Mfsd10|68294|major facilitator superfamily domain containing 10	BC064775|Mfsd10|68294|major facilitator superfamily domain containing 10
mm9_v1_chr17_-_15963016_15963102	0.0853855	HIF1A.p2	AK004310|Rgmb|68799|RGM domain family, member B
mm9_v1_chr11_+_109224104_109224273	0.0850787	HIF1A.p2	NM_010303|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK011851|Gna13|14674|guanine nucleotide binding protein, alpha 13	M63660|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK149766|Gna13|14674|guanine nucleotide binding protein, alpha 13	BC057665|Gna13|14674|guanine nucleotide binding protein, alpha 13
mm9_v1_chr13_-_38085986_38086062	0.0849458	HIF1A.p2	BC011255|Ssr1|107513|signal sequence receptor, alpha	AK010884|Ssr1|107513|signal sequence receptor, alpha	AK167793|Ssr1|107513|signal sequence receptor, alpha	AK160285|Ssr1|107513|signal sequence receptor, alpha	AF326229|Ssr1|107513|signal sequence receptor, alpha	AF395811|Ssr1|107513|signal sequence receptor, alpha	AY993942|Ssr1|107513|signal sequence receptor, alpha	AK166235|Ssr1|107513|signal sequence receptor, alpha	AK031538|Ssr1|107513|signal sequence receptor, alpha	AB009295|Ssr1|107513|signal sequence receptor, alpha	NM_025965|Ssr1|107513|signal sequence receptor, alpha
mm9_v1_chr5_-_24414236_24414326	0.0849423	HIF1A.p2	AY348864|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	AK165834|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	AK010703|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_001170555|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_001170556|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr10_+_41239248_41239438	0.0848964	HIF1A.p2	AK145131|Cd164|53599|CD164 antigen	AK169275|Cd164|53599|CD164 antigen	AB028895|Cd164|53599|CD164 antigen	NM_016898|Cd164|53599|CD164 antigen	AK018009|Cd164|53599|CD164 antigen	BC005414|Cd164|53599|CD164 antigen	AB014464|Cd164|53599|CD164 antigen	AF299345|Cd164|53599|CD164 antigen	AK194033|Cd164|53599|CD164 antigen
mm9_v1_chr4_-_110024513_110024515	0.0842791	HIF1A.p2	AF041341|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001163397|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr2_+_164312023_164312078	0.0842353	HIF1A.p2	BC019947|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	AY187289|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr1_-_34899809_34899850	0.0838991	HIF1A.p2	BC043098|Fam168b|214469|family with sequence similarity 168, member B
mm9_v1_chr7_+_138703898_138703948	0.0838213	HIF1A.p2	AK088534|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK138004|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	NM_009774|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	U67327|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	BC086790|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK190618|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm9_v1_chr8_+_108384479_108384590	0.083241	HIF1A.p2	BC083165|Nutf2|68051|nuclear transport factor 2	AK152212|Nutf2|68051|nuclear transport factor 2	BC003955|Nutf2|68051|nuclear transport factor 2	NM_026532|Nutf2|68051|nuclear transport factor 2	AK020512|Nutf2|68051|nuclear transport factor 2	AK028410|Nutf2|68051|nuclear transport factor 2	AK002461|Nutf2|68051|nuclear transport factor 2	AK012500|Nutf2|68051|nuclear transport factor 2	AK051049|Nutf2|68051|nuclear transport factor 2	AK168026|Nutf2|68051|nuclear transport factor 2	BC086773|Nutf2|68051|nuclear transport factor 2
mm9_v1_chr2_-_148701108_148701112	0.0832367	HIF1A.p2	AF311741|Cst3|13010|cystatin C	AF483486|Cst3|13010|cystatin C	AF483487|Cst3|13010|cystatin C
mm9_v1_chr17_-_32925192_32925205	0.0826464	HIF1A.p2	AK122579|Zfp871|208292|zinc finger protein 871
mm9_v1_chr10_+_17443024_17443226	0.082541	HIF1A.p2	AK131664|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AK133791|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_010828|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	BC057126|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U86445|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	Y15163|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
mm9_v1_chr8_+_90661746_90661852	0.0824363	HIF1A.p2	AK047782|Heatr3|234549|HEAT repeat containing 3	AK052635|Heatr3|234549|HEAT repeat containing 3	AK165541|Heatr3|234549|HEAT repeat containing 3	AK140522|Heatr3|234549|HEAT repeat containing 3	AK136424|Heatr3|234549|HEAT repeat containing 3	AK134510|Heatr3|234549|HEAT repeat containing 3	BC065060|Heatr3|234549|HEAT repeat containing 3	NM_172757|Heatr3|234549|HEAT repeat containing 3	AK163715|Heatr3|234549|HEAT repeat containing 3
mm9_v1_chr12_-_92828018_92828088	0.0823267	HIF1A.p2	AF250834|Gtf2a1|83602|general transcription factor II A, 1	BC079909|Gtf2a1|83602|general transcription factor II A, 1	AK139996|Gtf2a1|83602|general transcription factor II A, 1	NM_031391|Gtf2a1|83602|general transcription factor II A, 1
mm9_v1_chr1_-_14745828_14746072	0.0822136	HIF1A.p2	AB221639|Msc|17681|musculin	AF108216|Msc|17681|musculin	BC103594|Msc|17681|musculin	BC103592|Msc|17681|musculin	BC103593|Msc|17681|musculin	BC103623|Msc|17681|musculin	AF087035|Msc|17681|musculin	NM_010827|Msc|17681|musculin	AK138917|Msc|17681|musculin
mm9_v1_chr13_+_94073701_94073756	0.0815347	HIF1A.p2	AK137151|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr17_+_49754460_49754540	0.0813412	HIF1A.p2	AK083760|Kif6|319991|kinesin family member 6	NM_177052|Kif6|319991|kinesin family member 6	AK043404|Kif6|319991|kinesin family member 6
mm9_v1_chr11_-_120645076_120645236	0.0808563	HIF1A.p2	AK218494|Rfng|19719|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	AK207192|Rfng|19719|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm9_v1_chr2_-_115890247_115890356	0.0804881	HIF1A.p2	AK158513|Meis2|17536|Meis homeobox 2	AK158839|Meis2|17536|Meis homeobox 2	NM_001159569|Meis2|17536|Meis homeobox 2	NM_001159570|Meis2|17536|Meis homeobox 2
mm9_v1_chr11_+_95685772_95685902	0.0795737	HIF1A.p2	AJ457190|Phospho1|237928|phosphatase, orphan 1	NM_153104|Phospho1|237928|phosphatase, orphan 1
mm9_v1_chr5_+_75471625_75471626	0.0793878	HIF1A.p2	NM_133256|Gsx2|14843|GS homeobox 2	S79041|Gsx2|14843|GS homeobox 2	BC119464|Gsx2|14843|GS homeobox 2	BC119465|Gsx2|14843|GS homeobox 2
mm9_v1_chr8_+_85689973_85690078	0.0791422	HIF1A.p2	AK134614|Tbc1d9|71310|TBC1 domain family, member 9	AK173050|Tbc1d9|71310|TBC1 domain family, member 9
mm9_v1_chr3_+_106904470_106904486	0.0790679	HIF1A.p2	AK044342|Kcna2|16490|potassium voltage-gated channel, shaker-related subfamily, member 2	NM_008417|Kcna2|16490|potassium voltage-gated channel, shaker-related subfamily, member 2
mm9_v1_chr8_+_26707480_26707573	0.0787726	HIF1A.p2	AK054186|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene	AK085892|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene
mm9_v1_chr7_-_72017803_72017939	0.0785377	HIF1A.p2	AF319979|Ndnl2|66647|necdin-like 2	BC034892|Ndnl2|66647|necdin-like 2	AK131157|Ndnl2|66647|necdin-like 2	AK010294|Ndnl2|66647|necdin-like 2	AK018250|Ndnl2|66647|necdin-like 2	BC092289|Ndnl2|66647|necdin-like 2	AK049759|Ndnl2|66647|necdin-like 2	AK076471|Ndnl2|66647|necdin-like 2	AK017727|Ndnl2|66647|necdin-like 2	NM_023239|Ndnl2|66647|necdin-like 2
mm9_v1_chr5_-_115608123_115608152	0.0783634	HIF1A.p2	BC058245|Mlec|109154|malectin	BC035300|Mlec|109154|malectin
mm9_v1_chr7_-_30017388_30017620	0.0783593	HIF1A.p2	AK163847|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	AK036882|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	DQ185135|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	AK171038|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	AK132480|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	NM_001033525|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6
mm9_v1_chr5_+_93522512_93522577	0.0781722	HIF1A.p2	AK028475|Sept11|52398|septin 11	BC031456|Sept11|52398|septin 11
mm9_v1_chr13_+_37918780_37918800	0.0781592	HIF1A.p2	NM_001177868|Rreb1|68750|ras responsive element binding protein 1	AK047047|Rreb1|68750|ras responsive element binding protein 1	AK047251|Rreb1|68750|ras responsive element binding protein 1	AK171375|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr2_+_113167862_113167938	0.0779536	HIF1A.p2	NM_001043322|Fmn1|14260|formin 1	NM_010230|Fmn1|14260|formin 1	AK135758|Fmn1|14260|formin 1	X53599|Fmn1|14260|formin 1
mm9_v1_chr11_+_78003098_78003147	0.0779366	HIF1A.p2	AK200345|Rab34|19376|RAB34, member of RAS oncogene family	AK179020|Rab34|19376|RAB34, member of RAS oncogene family	AK205613|Rab34|19376|RAB34, member of RAS oncogene family	AK205647|Rab34|19376|RAB34, member of RAS oncogene family	AK216992|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chr1_+_74283144_74283225	0.077615	HIF1A.p2	AK151513|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr17_-_13185043_13185130	0.0769233	HIF1A.p2	BC046416|Wtap|60532|Wilms' tumour 1-associating protein	BC047338|Wtap|60532|Wilms' tumour 1-associating protein	BC093504|Wtap|60532|Wilms' tumour 1-associating protein	NM_001113532|Wtap|60532|Wilms' tumour 1-associating protein	NM_001113533|Wtap|60532|Wilms' tumour 1-associating protein
mm9_v1_chr2_+_129024496_129024619	0.0769083	HIF1A.p2	NM_001159593|Slc20a1|20515|solute carrier family 20, member 1	NM_015747|Slc20a1|20515|solute carrier family 20, member 1	AK084159|Slc20a1|20515|solute carrier family 20, member 1	AK155506|Slc20a1|20515|solute carrier family 20, member 1	AK035898|Slc20a1|20515|solute carrier family 20, member 1	AK089184|Slc20a1|20515|solute carrier family 20, member 1	AK003059|Slc20a1|20515|solute carrier family 20, member 1	BC015085|Slc20a1|20515|solute carrier family 20, member 1
mm9_v1_chr7_+_135110992_135111067	0.0768	HIF1A.p2	NM_139149|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK132141|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK134491|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK146198|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK149118|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK145582|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK032815|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK038226|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK139960|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK172554|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	BC058247|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	BC011078|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	BC040827|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AF224264|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)
mm9_v1_chr2_+_25719373_25719373	0.0765841	HIF1A.p2	FJ628361|Kcnt1|227632|potassium channel, subfamily T, member 1	NM_001145403|Kcnt1|227632|potassium channel, subfamily T, member 1
mm9_v1_chr4_-_131700278_131700485	0.0765669	HIF1A.p2	S66181|Oprd1|18386|opioid receptor, delta 1	L11064|Oprd1|18386|opioid receptor, delta 1	S65335|Oprd1|18386|opioid receptor, delta 1	BC137958|Oprd1|18386|opioid receptor, delta 1	BC137969|Oprd1|18386|opioid receptor, delta 1	L07271|Oprd1|18386|opioid receptor, delta 1	L06322|Oprd1|18386|opioid receptor, delta 1	AK043873|Oprd1|18386|opioid receptor, delta 1	NM_013622|Oprd1|18386|opioid receptor, delta 1
mm9_v1_chr8_-_72877109_72877124	0.0764281	HIF1A.p2	BC052149|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)
mm9_v1_chr3_-_75760691_75760752	0.0758345	HIF1A.p2	BC086642|Golim4|73124|golgi integral membrane protein 4	BC089354|Golim4|73124|golgi integral membrane protein 4	NM_175193|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr7_+_135667279_135667363	0.0757693	HIF1A.p2	AK007414|Bag3|29810|BCL2-associated athanogene 3	AK036675|Bag3|29810|BCL2-associated athanogene 3	AK016510|Bag3|29810|BCL2-associated athanogene 3	AF130471|Bag3|29810|BCL2-associated athanogene 3
mm9_v1_chr5_+_33361571_33361768	0.0750526	HIF1A.p2	AK077596|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK168520|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK169035|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK166922|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK169189|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	BC008187|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	U57311|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK187348|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK187410|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm9_v1_chr5_-_124637048_124637063	0.0749297	HIF1A.p2	AK147486|Pitpnm2|19679|phosphatidylinositol transfer protein, membrane-associated 2
mm9_v1_chr13_+_45485106_45485325	0.0748896	HIF1A.p2	AK034887|Mylip|218203|myosin regulatory light chain interacting protein	AK159478|Mylip|218203|myosin regulatory light chain interacting protein	NM_153789|Mylip|218203|myosin regulatory light chain interacting protein	AK171888|Mylip|218203|myosin regulatory light chain interacting protein	BC010206|Mylip|218203|myosin regulatory light chain interacting protein	AY434449|Mylip|218203|myosin regulatory light chain interacting protein	NM_181043|Mylip|218203|myosin regulatory light chain interacting protein
mm9_v1_chr3_+_62142698_62142868	0.0748154	HIF1A.p2	NM_001081295|Arhgef26|622434|Rho guanine nucleotide exchange factor (GEF) 26
mm9_v1_chr3_+_96405063_96405082	0.0747406	HIF1A.p2	AK051276|Lix1l|280411|Lix1-like
mm9_v1_chr11_-_116274124_116274168	0.0747227	HIF1A.p2	BC053070|Rnf157|217340|ring finger protein 157
mm9_v1_chr9_+_44205032_44205053	0.0743637	HIF1A.p2	AK147849|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chrX_-_96086314_96086363	0.0734772	HIF1A.p2	AK031419|Ophn1|94190|oligophrenin 1	AK036038|Ophn1|94190|oligophrenin 1	AK043239|Ophn1|94190|oligophrenin 1	AK048153|Ophn1|94190|oligophrenin 1	AK166392|Ophn1|94190|oligophrenin 1	NM_052976|Ophn1|94190|oligophrenin 1	AK039304|Ophn1|94190|oligophrenin 1
mm9_v1_chr17_+_34066835_34066937	0.0732712	HIF1A.p2	BC068121|Rgl2|19732|ral guanine nucleotide dissociation stimulator-like 2	NM_009059|Rgl2|19732|ral guanine nucleotide dissociation stimulator-like 2	AK144440|Rgl2|19732|ral guanine nucleotide dissociation stimulator-like 2	U54639|Rgl2|19732|ral guanine nucleotide dissociation stimulator-like 2
mm9_v1_chr2_+_90729768_90729873	0.0729662	HIF1A.p2	AK004340|C1qtnf4|67445|C1q and tumor necrosis factor related protein 4
mm9_v1_chr11_+_80022524_80022572	0.0724587	HIF1A.p2	AK147801|Rhot1|59040|ras homolog gene family, member T1	AK167502|Rhot1|59040|ras homolog gene family, member T1	NM_001163354|Rhot1|59040|ras homolog gene family, member T1	NM_001163355|Rhot1|59040|ras homolog gene family, member T1	NM_021536|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr17_+_46787285_46787649	0.0724389	HIF1A.p2	AK155583|Cul7|66515|cullin 7	AK170580|Cul7|66515|cullin 7	NM_025611|Cul7|66515|cullin 7	AK082134|Cul7|66515|cullin 7	BC138998|Cul7|66515|cullin 7	BC139000|Cul7|66515|cullin 7	AK166135|Cul7|66515|cullin 7	AK170808|Cul7|66515|cullin 7	AK155454|Cul7|66515|cullin 7	AK144856|Cul7|66515|cullin 7	AK147156|Cul7|66515|cullin 7	AK147905|Cul7|66515|cullin 7
mm9_v1_chr10_-_77632399_77632581	0.07211	HIF1A.p2	BC013475|D10Jhu81e|28295|DNA segment, Chr 10, Johns Hopkins University 81 expressed	AK003866|D10Jhu81e|28295|DNA segment, Chr 10, Johns Hopkins University 81 expressed	NM_138601|D10Jhu81e|28295|DNA segment, Chr 10, Johns Hopkins University 81 expressed
mm9_v1_chr3_-_104620975_104621042	0.0721082	HIF1A.p2	AK048523|Mov10|17454|Moloney leukemia virus 10
mm9_v1_chr12_-_36883307_36883421	0.0718387	HIF1A.p2	BC058796|Bzw2|66912|basic leucine zipper and W2 domains 2	AB244988|Bzw2|66912|basic leucine zipper and W2 domains 2	BC013060|Bzw2|66912|basic leucine zipper and W2 domains 2	AK088108|Bzw2|66912|basic leucine zipper and W2 domains 2	AK132595|Bzw2|66912|basic leucine zipper and W2 domains 2	AK162647|Bzw2|66912|basic leucine zipper and W2 domains 2	AK011253|Bzw2|66912|basic leucine zipper and W2 domains 2	AK160544|Bzw2|66912|basic leucine zipper and W2 domains 2	AK003229|Bzw2|66912|basic leucine zipper and W2 domains 2	NM_025840|Bzw2|66912|basic leucine zipper and W2 domains 2
mm9_v1_chr11_+_119216870_119216901	0.0703544	HIF1A.p2	AF345196|Slc26a11|268512|solute carrier family 26, member 11	NM_178743|Slc26a11|268512|solute carrier family 26, member 11	AK089182|Slc26a11|268512|solute carrier family 26, member 11	AK078545|Slc26a11|268512|solute carrier family 26, member 11	BC038604|Slc26a11|268512|solute carrier family 26, member 11
mm9_v1_chr18_+_56867378_56867570	0.070325	HIF1A.p2	AK079511|Lmnb1|16906|lamin B1	AK132252|Lmnb1|16906|lamin B1	NM_010721|Lmnb1|16906|lamin B1	AK089110|Lmnb1|16906|lamin B1	BC052729|Lmnb1|16906|lamin B1	BC058392|Lmnb1|16906|lamin B1	M35153|Lmnb1|16906|lamin B1	X16705|Lmnb1|16906|lamin B1
mm9_v1_chr9_+_44215727_44215760	0.069629	HIF1A.p2	
mm9_v1_chr16_-_55974685_55974705	0.0694362	HIF1A.p2	AK010004|2310061J03Rik|66391|RIKEN cDNA 2310061J03 gene
mm9_v1_chr16_-_90144013_90144100	0.0689709	HIF1A.p2	BC065126|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	AK043966|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr3_+_89577436_89577810	0.0689226	HIF1A.p2	NM_027315|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1	AY112699|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1	AY945937|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1	AK146707|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr7_-_74904546_74904632	0.0680799	HIF1A.p2	BC115442|Synm|233335|synemin, intermediate filament protein	BC115443|Synm|233335|synemin, intermediate filament protein	BC026872|Synm|233335|synemin, intermediate filament protein	BC040093|Synm|233335|synemin, intermediate filament protein	AJ579700|Synm|233335|synemin, intermediate filament protein	AJ579701|Synm|233335|synemin, intermediate filament protein	AJ579702|Synm|233335|synemin, intermediate filament protein	AK143019|Synm|233335|synemin, intermediate filament protein	NM_183312|Synm|233335|synemin, intermediate filament protein	NM_201639|Synm|233335|synemin, intermediate filament protein	NM_207663|Synm|233335|synemin, intermediate filament protein
mm9_v1_chr5_+_53225301_53225438	0.0677012	HIF1A.p2	AK168897|Anapc4|52206|anaphase promoting complex subunit 4	AK148625|Anapc4|52206|anaphase promoting complex subunit 4	BC024870|Anapc4|52206|anaphase promoting complex subunit 4	NM_024213|Anapc4|52206|anaphase promoting complex subunit 4	AK146000|Anapc4|52206|anaphase promoting complex subunit 4	AK168031|Anapc4|52206|anaphase promoting complex subunit 4	AK088759|Anapc4|52206|anaphase promoting complex subunit 4	BC016237|Anapc4|52206|anaphase promoting complex subunit 4
mm9_v1_chr2_+_153171730_153171874	0.0675853	HIF1A.p2	AK122413|Asxl1|228790|additional sex combs like 1 (Drosophila)	NM_001039939|Asxl1|228790|additional sex combs like 1 (Drosophila)
mm9_v1_chr11_-_40568710_40568789	0.0674046	HIF1A.p2	AK167486|Ccng1|12450|cyclin G1	AK159429|Ccng1|12450|cyclin G1	AK153392|Ccng1|12450|cyclin G1	AK167052|Ccng1|12450|cyclin G1	AK159831|Ccng1|12450|cyclin G1	L49507|Ccng1|12450|cyclin G1	Z37110|Ccng1|12450|cyclin G1	AK160411|Ccng1|12450|cyclin G1	AK128957|Ccng1|12450|cyclin G1	AK147026|Ccng1|12450|cyclin G1	AK170397|Ccng1|12450|cyclin G1	AK143114|Ccng1|12450|cyclin G1	NM_009831|Ccng1|12450|cyclin G1
mm9_v1_chr12_+_16660245_16660299	0.066947	HIF1A.p2	AK158943|Ntsr2|18217|neurotensin receptor 2	NM_008747|Ntsr2|18217|neurotensin receptor 2	U51908|Ntsr2|18217|neurotensin receptor 2	BC141019|Ntsr2|18217|neurotensin receptor 2	AB041826|Ntsr2|18217|neurotensin receptor 2	AB041827|Ntsr2|18217|neurotensin receptor 2
mm9_v1_chr10_+_45297632_45297737	0.0662013	HIF1A.p2	NM_172473|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	AK156958|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	AK042879|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC120695|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC120697|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
mm9_v1_chr1_-_58026858_58026927	0.0661092	HIF1A.p2	AK032658|Kctd18|51960|potassium channel tetramerisation domain containing 18	AK132699|Kctd18|51960|potassium channel tetramerisation domain containing 18	AK053098|Kctd18|51960|potassium channel tetramerisation domain containing 18	AK079700|Kctd18|51960|potassium channel tetramerisation domain containing 18	NM_001159864|Kctd18|51960|potassium channel tetramerisation domain containing 18	NM_001159865|Kctd18|51960|potassium channel tetramerisation domain containing 18	NM_030211|Kctd18|51960|potassium channel tetramerisation domain containing 18
mm9_v1_chr1_-_34899869_34899871	0.0659536	HIF1A.p2	BC040511|Fam168b|214469|family with sequence similarity 168, member B	BC059247|Fam168b|214469|family with sequence similarity 168, member B
mm9_v1_chr4_+_116692006_116692070	0.0658276	HIF1A.p2	NM_001111277|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	NM_175135|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172173|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK145856|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172302|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3
mm9_v1_chr12_-_32746061_32746210	0.0654223	HIF1A.p2	BC048710|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK011647|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK138963|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK041013|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK135621|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	NM_011158|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta
mm9_v1_chr5_+_8422837_8422987	0.0647321	HIF1A.p2	AK044260|Slc25a40|319653|solute carrier family 25, member 40	AK045863|Slc25a40|319653|solute carrier family 25, member 40	NM_178766|Slc25a40|319653|solute carrier family 25, member 40	AK044862|Slc25a40|319653|solute carrier family 25, member 40	AK136770|Slc25a40|319653|solute carrier family 25, member 40	AK163037|Slc25a40|319653|solute carrier family 25, member 40	AK088444|Slc25a40|319653|solute carrier family 25, member 40	AK079538|Slc25a40|319653|solute carrier family 25, member 40	AK084797|Slc25a40|319653|solute carrier family 25, member 40	BC083103|Slc25a40|319653|solute carrier family 25, member 40
mm9_v1_chr13_+_31717603_31717684	0.0641771	HIF1A.p2	AK132385|Foxf2|14238|forkhead box F2	NM_010225|Foxf2|14238|forkhead box F2
mm9_v1_chr13_-_93962125_93962314	0.0641502	HIF1A.p2	AK146086|Papd4|100715|PAP associated domain containing 4	BC016629|Papd4|100715|PAP associated domain containing 4	NM_133905|Papd4|100715|PAP associated domain containing 4
mm9_v1_chr7_+_52825672_52825751	0.0641457	HIF1A.p2	AK037482|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	AF031467|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC048072|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	NM_009737|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	U68526|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC017688|Bcat2|12036|branched chain aminotransferase 2, mitochondrial
mm9_v1_chr19_+_8994949_8995109	0.0630102	HIF1A.p2	AK146264|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK013004|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AB019523|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC002103|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK219513|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
mm9_v1_chr4_-_134323845_134323948	0.0623687	HIF1A.p2	BC021467|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK159800|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC066808|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC067411|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK167290|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK029008|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK148340|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	NM_145554|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1
mm9_v1_chrX_+_165233030_165233030	0.0622892	HIF1A.p2	AK164501|Arhgap6|11856|Rho GTPase activating protein 6	AK171677|Arhgap6|11856|Rho GTPase activating protein 6	NM_009707|Arhgap6|11856|Rho GTPase activating protein 6
mm9_v1_chr2_+_61431102_61431246	0.0620127	HIF1A.p2	NM_001164071|Tank|21353|TRAF family member-associated Nf-kappa B activator	NM_001164072|Tank|21353|TRAF family member-associated Nf-kappa B activator	BC026148|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK031559|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK165420|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK088817|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK147727|Tank|21353|TRAF family member-associated Nf-kappa B activator	U51907|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK038910|Tank|21353|TRAF family member-associated Nf-kappa B activator	BC033282|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK165994|Tank|21353|TRAF family member-associated Nf-kappa B activator
mm9_v1_chr1_-_34899788_34899793	0.0619468	HIF1A.p2	AK144298|Fam168b|214469|family with sequence similarity 168, member B
mm9_v1_chr15_+_98957224_98957275	0.0619099	HIF1A.p2	AK171266|Spats2|72572|spermatogenesis associated, serine-rich 2	AK048720|Spats2|72572|spermatogenesis associated, serine-rich 2	AB079132|Spats2|72572|spermatogenesis associated, serine-rich 2	NM_139140|Spats2|72572|spermatogenesis associated, serine-rich 2
mm9_v1_chr16_+_59471600_59471691	0.0618346	HIF1A.p2	NM_025910|Mina|67014|myc induced nuclear antigen	AK007810|Mina|67014|myc induced nuclear antigen	AK032595|Mina|67014|myc induced nuclear antigen	AK013451|Mina|67014|myc induced nuclear antigen	AK014426|Mina|67014|myc induced nuclear antigen	AK019117|Mina|67014|myc induced nuclear antigen	AK031671|Mina|67014|myc induced nuclear antigen	BC025109|Mina|67014|myc induced nuclear antigen	BC058242|Mina|67014|myc induced nuclear antigen
mm9_v1_chr17_-_26338254_26338295	0.061798	HIF1A.p2	BC002032|Arhgdig|14570|Rho GDP dissociation inhibitor (GDI) gamma	NM_008113|Arhgdig|14570|Rho GDP dissociation inhibitor (GDI) gamma
mm9_v1_chr9_-_115219520_115219538	0.061579	HIF1A.p2	BC052433|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	NM_024222|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chrX_+_71550669_71550710	0.0614392	HIF1A.p2	BC013758|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AF251042|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK209882|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK179895|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK205324|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK206024|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1	AK206073|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1
mm9_v1_chr15_+_93228780_93228894	0.0610539	HIF1A.p2	AK168443|Pphln1|223828|periphilin 1	NM_001083114|Pphln1|223828|periphilin 1	NM_146062|Pphln1|223828|periphilin 1	NM_175363|Pphln1|223828|periphilin 1	AK081606|Pphln1|223828|periphilin 1	AK160138|Pphln1|223828|periphilin 1	BC031486|Pphln1|223828|periphilin 1	AK150904|Pphln1|223828|periphilin 1	BC150854|Pphln1|223828|periphilin 1	AK158488|Pphln1|223828|periphilin 1
mm9_v1_chr6_+_119125257_119125415	0.0607239	HIF1A.p2	AK153860|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	NM_001033379|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	BC141162|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	BC141163|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK050548|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK049193|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK216011|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK047334|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)
mm9_v1_chr17_-_25023253_25023304	0.0603476	HIF1A.p2	AK169896|Nubp2|26426|nucleotide binding protein 2	AF114169|Nubp2|26426|nucleotide binding protein 2	BC012635|Nubp2|26426|nucleotide binding protein 2	AK003816|Nubp2|26426|nucleotide binding protein 2	NM_011956|Nubp2|26426|nucleotide binding protein 2
mm9_v1_chr6_-_28371572_28371734	0.0601526	HIF1A.p2	BC066807|Gcc1|74375|golgi coiled coil 1	AK032253|Gcc1|74375|golgi coiled coil 1	NM_028900|Gcc1|74375|golgi coiled coil 1
mm9_v1_chr14_-_73725413_73725527	0.0599352	HIF1A.p2	DQ400415|Rb1|19645|retinoblastoma 1
mm9_v1_chr14_-_122196838_122196921	0.0596534	HIF1A.p2	BC158127|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr17_+_88036128_88036130	0.0589623	HIF1A.p2	AK145752|Epcam|17075|epithelial cell adhesion molecule
mm9_v1_chr3_-_75760820_75760839	0.0582574	HIF1A.p2	AK149286|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr15_-_93167308_93167408	0.0580314	HIF1A.p2	AK148634|Yaf2|67057|YY1 associated factor 2	AB100452|Yaf2|67057|YY1 associated factor 2	AB100453|Yaf2|67057|YY1 associated factor 2	AK005008|Yaf2|67057|YY1 associated factor 2	AK011702|Yaf2|67057|YY1 associated factor 2	NM_024189|Yaf2|67057|YY1 associated factor 2
mm9_v1_chr8_-_126545208_126545336	0.0576926	HIF1A.p2	BC013550|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	NM_133966|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK089463|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK154832|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
mm9_v1_chr5_-_31522889_31523027	0.0576069	HIF1A.p2	BC009004|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	NM_008014|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
mm9_v1_chr12_-_70993825_70993856	0.0575512	HIF1A.p2	AK084891|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr12_-_111934448_111934564	0.057508	HIF1A.p2	AK147641|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC018232|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC046614|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK183519|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC057287|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC009003|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC037151|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	BC094024|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166729|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166847|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK157849|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167086|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK168605|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK088975|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK146944|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166696|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166720|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166867|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167008|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167065|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167114|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167171|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK167188|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK168407|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK168620|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK166896|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK077095|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1	AK161276|Hsp90aa1|15519|heat shock protein 90, alpha (cytosolic), class A member 1
mm9_v1_chr7_-_16531363_16531456	0.0574287	HIF1A.p2	BC025810|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AY535001|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK077341|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK160070|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK088461|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK151836|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK169290|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK146916|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	NM_133831|Gltscr2|68077|glioma tumor suppressor candidate region gene 2
mm9_v1_chr7_+_13507659_13507740	0.0573876	HIF1A.p2	NM_009095|Rps5|20103|ribosomal protein S5	AK002235|Rps5|20103|ribosomal protein S5	AK009663|Rps5|20103|ribosomal protein S5	AK010681|Rps5|20103|ribosomal protein S5	AK012424|Rps5|20103|ribosomal protein S5	AK012481|Rps5|20103|ribosomal protein S5	AK020754|Rps5|20103|ribosomal protein S5	AK050611|Rps5|20103|ribosomal protein S5	AK050622|Rps5|20103|ribosomal protein S5	AK152449|Rps5|20103|ribosomal protein S5	AK160552|Rps5|20103|ribosomal protein S5	AK164079|Rps5|20103|ribosomal protein S5	AK167533|Rps5|20103|ribosomal protein S5	AK168044|Rps5|20103|ribosomal protein S5	AK169016|Rps5|20103|ribosomal protein S5	AK172446|Rps5|20103|ribosomal protein S5	AK020477|Rps5|20103|ribosomal protein S5	AK168106|Rps5|20103|ribosomal protein S5	BC058690|Rps5|20103|ribosomal protein S5	U78085|Rps5|20103|ribosomal protein S5	BC020401|Rps5|20103|ribosomal protein S5	Y12431|Rps5|20103|ribosomal protein S5
mm9_v1_chr9_+_56798705_56798743	0.0573726	HIF1A.p2	AK002717|Snupn|66069|snurportin 1	AK155315|Snupn|66069|snurportin 1	AK013151|Snupn|66069|snurportin 1	BC061258|Snupn|66069|snurportin 1	BC049638|Snupn|66069|snurportin 1	NM_178374|Snupn|66069|snurportin 1
mm9_v1_chr6_-_85401198_85401297	0.0568661	HIF1A.p2	BC115452|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	AK006658|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	NM_001163427|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	NM_028505|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene
mm9_v1_chr2_+_37307786_37307807	0.0563955	HIF1A.p2	AK029667|Rabgap1|227800|RAB GTPase activating protein 1
mm9_v1_chr11_+_94491207_94491351	0.0563706	HIF1A.p2	AK183165|Lrrc59|98238|leucine rich repeat containing 59
mm9_v1_chr13_+_74777303_74777332	0.0563347	HIF1A.p2	BC046610|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK159406|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK030329|Erap1|80898|endoplasmic reticulum aminopeptidase 1	NM_030711|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK029841|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK036559|Erap1|80898|endoplasmic reticulum aminopeptidase 1
mm9_v1_chr2_+_156301651_156301691	0.0561207	HIF1A.p2	AK122251|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1
mm9_v1_chr4_-_63156099_63156155	0.0555974	HIF1A.p2	AK122523|Whrn|73750|whirlin
mm9_v1_chr15_+_100299408_100299504	0.0551251	HIF1A.p2	NM_134093|Letmd1|68614|LETM1 domain containing 1	AK158718|Letmd1|68614|LETM1 domain containing 1
mm9_v1_chr11_+_100931369_100931476	0.054684	HIF1A.p2	AK143546|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	NM_013792|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK170758|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK158045|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK164125|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	BC055733|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	U85247|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm9_v1_chr5_+_139728268_139728480	0.0546266	HIF1A.p2	NM_026269|Get4|67604|golgi to ER traffic protein 4 homolog (S. cerevisiae)	AK003551|Get4|67604|golgi to ER traffic protein 4 homolog (S. cerevisiae)
mm9_v1_chr1_-_60623487_60623632	0.0543049	HIF1A.p2	NM_001045513|Raph1|77300|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm9_v1_chr4_+_137950977_137951112	0.0541216	HIF1A.p2	AB041806|AB041806|58213|hypothetical protein, MNCb-2457
mm9_v1_chr10_-_70622370_70622639	0.0540964	HIF1A.p2	AF319464|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	BC111523|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	NM_031397|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	AK076154|Bicc1|83675|bicaudal C homolog 1 (Drosophila)
mm9_v1_chr11_-_116713389_116713469	0.0540534	HIF1A.p2	AF250132|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr8_-_108375786_108375962	0.0539911	HIF1A.p2	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr1_-_34899878_34899900	0.0538094	HIF1A.p2	AK220453|Fam168b|214469|family with sequence similarity 168, member B	NM_001160235|Fam168b|214469|family with sequence similarity 168, member B	NM_001160236|Fam168b|214469|family with sequence similarity 168, member B	NM_174997|Fam168b|214469|family with sequence similarity 168, member B
mm9_v1_chr9_+_70390659_70390695	0.0533135	HIF1A.p2	AK017715|Sltm|66660|SAFB-like, transcription modulator	AF462146|Sltm|66660|SAFB-like, transcription modulator	NM_025690|Sltm|66660|SAFB-like, transcription modulator	BC139202|Sltm|66660|SAFB-like, transcription modulator	BC145577|Sltm|66660|SAFB-like, transcription modulator
mm9_v1_chr5_+_30950295_30950374	0.0531984	HIF1A.p2	NM_175675|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK015555|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK169121|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK037237|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	BC019457|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK077623|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK151122|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK051359|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK149968|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK049408|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK169163|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK159707|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene
mm9_v1_chr11_-_86807135_86807208	0.0530944	HIF1A.p2	BC121190|Ypel2|77864|yippee-like 2 (Drosophila)	AK089126|Ypel2|77864|yippee-like 2 (Drosophila)	AK021387|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr12_-_17006800_17006879	0.0524774	HIF1A.p2	AK089230|Pqlc3|217430|PQ loop repeat containing	AK150094|Pqlc3|217430|PQ loop repeat containing	BC025220|Pqlc3|217430|PQ loop repeat containing	AK053171|Pqlc3|217430|PQ loop repeat containing
mm9_v1_chr4_+_107040634_107040642	0.0523341	HIF1A.p2	BC021337|Tmem48|72787|transmembrane protein 48
mm9_v1_chr2_+_38206759_38206827	0.0520677	HIF1A.p2	AK053572|Lhx2|16870|LIM homeobox protein 2	NM_010710|Lhx2|16870|LIM homeobox protein 2
mm9_v1_chr12_+_81216835_81216867	0.0519715	HIF1A.p2	AK040614|1300014J16Rik|74160|RIKEN cDNA 1300014J16 gene	AK005005|1300014J16Rik|74160|RIKEN cDNA 1300014J16 gene
mm9_v1_chr7_+_129210954_129210978	0.0518128	HIF1A.p2	AK011862|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr10_-_26094990_26095024	0.0517724	HIF1A.p2	AK045667|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	NM_172787|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK049597|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr15_-_39688931_39689018	0.051533	HIF1A.p2	AF227731|Dpys|64705|dihydropyrimidinase	BC037086|Dpys|64705|dihydropyrimidinase	AF249296|Dpys|64705|dihydropyrimidinase	AK004899|Dpys|64705|dihydropyrimidinase	AK004822|Dpys|64705|dihydropyrimidinase	NM_001164466|Dpys|64705|dihydropyrimidinase	NM_022722|Dpys|64705|dihydropyrimidinase
mm9_v1_chr11_+_106078232_106078424	0.0514704	HIF1A.p2	AK049311|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_028074|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK169816|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK021013|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK171730|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK134182|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
mm9_v1_chrX_+_132528317_132528387	0.0513978	HIF1A.p2	AK018307|6530401D17Rik|76219|RIKEN cDNA 6530401D17 gene	NM_029823|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene	AK013740|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene	BC030351|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene	AK077432|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene
mm9_v1_chr10_+_53316720_53316974	0.0513061	HIF1A.p2	AK010210|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	NM_025541|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK012376|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK031513|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK088618|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK007804|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC027628|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm9_v1_chr1_-_90102270_90102322	0.0508166	HIF1A.p2	AK005690|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	AK005688|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	BC048490|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_008299|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	U95607|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3
mm9_v1_chr8_+_119467267_119467410	0.0498505	HIF1A.p2	AX775769|Atmin|234776|ATM interactor	NM_177700|Atmin|234776|ATM interactor	BC060631|Atmin|234776|ATM interactor	BC027752|Atmin|234776|ATM interactor	AK122281|Atmin|234776|ATM interactor
mm9_v1_chr2_-_118982663_118982690	0.0495951	HIF1A.p2	BC055754|Fam82a2|67809|family with sequence similarity 82, member A2	AK165302|Fam82a2|67809|family with sequence similarity 82, member A2	AK146299|Fam82a2|67809|family with sequence similarity 82, member A2	AK153369|Fam82a2|67809|family with sequence similarity 82, member A2	AK151090|Fam82a2|67809|family with sequence similarity 82, member A2	AK153322|Fam82a2|67809|family with sequence similarity 82, member A2
mm9_v1_chr9_-_113617224_113617390	0.0495337	HIF1A.p2	AJ005073|Pdcd6ip|18571|programmed cell death 6 interacting protein	AJ005074|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC051123|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC026823|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK167574|Pdcd6ip|18571|programmed cell death 6 interacting protein	AF119955|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK029827|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK129340|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK147736|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK031256|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK033943|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK145893|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK169704|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164677|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164678|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_011052|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr3_-_75760554_75760585	0.0493723	HIF1A.p2	AK081156|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr1_-_37921891_37921923	0.0493478	HIF1A.p2	AK164954|Tsga10|211484|testis specific 10	AK163138|Tsga10|211484|testis specific 10	BC066782|Tsga10|211484|testis specific 10	NM_207228|Tsga10|211484|testis specific 10
mm9_v1_chr11_-_120434181_120434192	0.0490314	HIF1A.p2	AK168330|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK169265|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK170603|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK141304|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK146542|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK149605|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK149965|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK150422|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK150592|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK150805|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK151546|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK152141|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK152217|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK152791|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK152834|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK153365|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK159606|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK159729|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK159965|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK161537|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK167796|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK168612|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK168893|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	X06453|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr19_+_47253309_47253309	0.0489132	HIF1A.p2	BC099702|Neurl1a|18011|neuralized homolog 1A (Drosophila)	NM_021360|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr2_+_119625249_119625324	0.0488534	HIF1A.p2	BC066058|Tyro3|22174|TYRO3 protein tyrosine kinase 3	NM_019392|Tyro3|22174|TYRO3 protein tyrosine kinase 3	BC082325|Tyro3|22174|TYRO3 protein tyrosine kinase 3	X78103|Tyro3|22174|TYRO3 protein tyrosine kinase 3	U18933|Tyro3|22174|TYRO3 protein tyrosine kinase 3
mm9_v1_chr19_-_4615460_4615508	0.0488163	HIF1A.p2	AK081560|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr3_-_104621424_104621520	0.0486475	HIF1A.p2	AK159295|Mov10|17454|Moloney leukemia virus 10	NM_001163440|Mov10|17454|Moloney leukemia virus 10
mm9_v1_chr18_-_35814841_35814887	0.0485783	HIF1A.p2	AK146021|Gm1614|381148|predicted gene 1614
mm9_v1_chr11_+_95275392_95275501	0.0485234	HIF1A.p2	NM_025287|Spop|20747|speckle-type POZ protein	AK168546|Spop|20747|speckle-type POZ protein	AK030746|Spop|20747|speckle-type POZ protein	AK132383|Spop|20747|speckle-type POZ protein	BC045205|Spop|20747|speckle-type POZ protein	AK004669|Spop|20747|speckle-type POZ protein	AK159482|Spop|20747|speckle-type POZ protein	AK028201|Spop|20747|speckle-type POZ protein	BC064809|Spop|20747|speckle-type POZ protein	AK168185|Spop|20747|speckle-type POZ protein	AK166581|Spop|20747|speckle-type POZ protein	AK160858|Spop|20747|speckle-type POZ protein
mm9_v1_chr16_+_13672078_13672141	0.0485123	HIF1A.p2	AK031567|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK013874|Bfar|67118|bifunctional apoptosis regulator	BC027221|Bfar|67118|bifunctional apoptosis regulator	AK012939|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK028592|Bfar|67118|bifunctional apoptosis regulator	NM_025653|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene
mm9_v1_chr9_-_105397342_105397452	0.0484707	HIF1A.p2	AK032255|Atp2c1|235574|ATPase, Ca++-sequestering	AK028393|Atp2c1|235574|ATPase, Ca++-sequestering	BC043706|Atp2c1|235574|ATPase, Ca++-sequestering	AK159918|Atp2c1|235574|ATPase, Ca++-sequestering	AK163049|Atp2c1|235574|ATPase, Ca++-sequestering	BC043091|Atp2c1|235574|ATPase, Ca++-sequestering	AK052958|Atp2c1|235574|ATPase, Ca++-sequestering	NM_175025|Atp2c1|235574|ATPase, Ca++-sequestering
mm9_v1_chr2_-_25877064_25877129	0.0481843	HIF1A.p2	AK157857|Ubac1|98766|ubiquitin associated domain containing 1
mm9_v1_chr10_-_80841099_80841253	0.0481574	HIF1A.p2	AF083809|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	NM_019757|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK081476|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK163951|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK083686|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK155370|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK051993|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	BC006616|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK154822|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK172679|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)
mm9_v1_chr7_-_134852110_134852201	0.0478466	HIF1A.p2	Y11905|Bcl7c|12055|B-cell CLL/lymphoma 7C	BC058530|Bcl7c|12055|B-cell CLL/lymphoma 7C	AK131935|Bcl7c|12055|B-cell CLL/lymphoma 7C
mm9_v1_chr7_-_36587975_36588025	0.0477168	HIF1A.p2	AK129283|Zfp507|668501|zinc finger protein 507	BC050041|Zfp507|668501|zinc finger protein 507	AK142141|Zfp507|668501|zinc finger protein 507	NM_177739|Zfp507|668501|zinc finger protein 507	AK172290|E130304I02Rik|78547|RIKEN cDNA E130304I02 gene
mm9_v1_chr16_+_36875173_36875328	0.0476916	HIF1A.p2	AK155420|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1	AK155415|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1	AK020091|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1	BC061204|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr2_+_164311639_164311740	0.0475912	HIF1A.p2	NM_001048227|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr1_+_193730645_193730708	0.0475215	HIF1A.p2	AK145100|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	NM_009579|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	BC052166|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1
mm9_v1_chr8_-_42219037_42219129	0.0473091	HIF1A.p2	AK040710|Mtus1|102103|mitochondrial tumor suppressor 1	AK143781|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005863|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr11_-_77979070_77979090	0.046863	HIF1A.p2	AK046015|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr10_+_31033188_31033271	0.0465702	HIF1A.p2	BC104360|Hddc2|69692|HD domain containing 2	BC104361|Hddc2|69692|HD domain containing 2	NM_027168|Hddc2|69692|HD domain containing 2	AK009957|Hddc2|69692|HD domain containing 2
mm9_v1_chr5_-_124699740_124699768	0.0462644	HIF1A.p2	BC082303|Pitpnm2|19679|phosphatidylinositol transfer protein, membrane-associated 2
mm9_v1_chr13_+_97841524_97841597	0.0458434	HIF1A.p2	AK173051|Fam169a|320557|family with sequence similarity 169, member A	NM_001100458|Fam169a|320557|family with sequence similarity 169, member A
mm9_v1_chr9_+_62189138_62189256	0.0457996	HIF1A.p2	NM_009672|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	AK020753|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	BC062899|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	AF022957|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm9_v1_chr2_-_153458365_153458496	0.0457557	HIF1A.p2	AK177311|Commd7|99311|COMM domain containing 7	BC065794|Commd7|99311|COMM domain containing 7	AK164805|Commd7|99311|COMM domain containing 7	BC092215|Commd7|99311|COMM domain containing 7	BC003310|Commd7|99311|COMM domain containing 7	AK077349|Commd7|99311|COMM domain containing 7	AK089926|Commd7|99311|COMM domain containing 7	AK169037|Commd7|99311|COMM domain containing 7	AK046582|Commd7|99311|COMM domain containing 7	AK008447|Commd7|99311|COMM domain containing 7	BC094216|Commd7|99311|COMM domain containing 7	AK078774|Commd7|99311|COMM domain containing 7	AK009274|Commd7|99311|COMM domain containing 7
mm9_v1_chr4_+_19935389_19935537	0.0451565	HIF1A.p2	BC026882|Ttpa|50500|tocopherol (alpha) transfer protein
mm9_v1_chr3_-_110053886_110053935	0.0448581	HIF1A.p2	AK034732|Prmt6|99890|protein arginine N-methyltransferase 6	BC066221|Prmt6|99890|protein arginine N-methyltransferase 6	AK157132|Prmt6|99890|protein arginine N-methyltransferase 6	BC022899|Prmt6|99890|protein arginine N-methyltransferase 6	AK172003|Prmt6|99890|protein arginine N-methyltransferase 6	AK087608|Prmt6|99890|protein arginine N-methyltransferase 6	AK172105|Prmt6|99890|protein arginine N-methyltransferase 6	AK172722|Prmt6|99890|protein arginine N-methyltransferase 6	NM_178891|Prmt6|99890|protein arginine N-methyltransferase 6
mm9_v1_chr11_+_85646309_85646316	0.0442044	HIF1A.p2	AK149348|Tbx2|21385|T-box 2
mm9_v1_chr2_+_119625505_119625569	0.0440017	HIF1A.p2	AB000828|Tyro3|22174|TYRO3 protein tyrosine kinase 3
mm9_v1_chr9_+_107453862_107453927	0.0439026	HIF1A.p2	EU314810|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1
mm9_v1_chr2_+_166840778_166840830	0.0436596	HIF1A.p2	AK138442|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	AK146469|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	AK134274|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC024730|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC024981|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC033398|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	NM_153065|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
mm9_v1_chr15_+_74552040_74552053	0.0435314	HIF1A.p2	AK019809|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chr1_+_42908239_42908242	0.0434501	HIF1A.p2	AK214977|Mrps9|69527|mitochondrial ribosomal protein S9
mm9_v1_chr11_-_116485513_116485568	0.0433608	HIF1A.p2	BC052182|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK154639|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK042365|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK171085|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	NM_001167680|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AY167043|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)
mm9_v1_chr12_+_114378368_114378447	0.0433607	HIF1A.p2	NM_024223|Crip2|68337|cysteine rich protein 2
mm9_v1_chr2_+_164571458_164571553	0.0431926	HIF1A.p2	AK018299|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK145239|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168357|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168315|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	BC003486|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	NM_133763|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AB045974|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1
mm9_v1_chr9_-_50535949_50536088	0.0431208	HIF1A.p2	AY549884|Dixdc1|330938|DIX domain containing 1	AK016205|Dixdc1|330938|DIX domain containing 1	BC048182|Dixdc1|330938|DIX domain containing 1	BC063085|Dixdc1|330938|DIX domain containing 1	AK164424|Dixdc1|330938|DIX domain containing 1	NM_178118|Dixdc1|330938|DIX domain containing 1
mm9_v1_chr8_+_37157863_37157905	0.0418407	HIF1A.p2	NM_172911|D8Ertd82e|244418|DNA segment, Chr 8, ERATO Doi 82, expressed
mm9_v1_chr9_+_122714664_122714720	0.0416108	HIF1A.p2	NM_001013405|D9Ertd402e|382117|DNA segment, Chr 9, ERATO Doi 402, expressed	BC080690|D9Ertd402e|382117|DNA segment, Chr 9, ERATO Doi 402, expressed
mm9_v1_chr5_-_38611602_38611692	0.0416092	HIF1A.p2	BC029122|Zbtb49|75079|zinc finger and BTB domain containing 49	BC028988|Zbtb49|75079|zinc finger and BTB domain containing 49	AK043044|Zbtb49|75079|zinc finger and BTB domain containing 49	AK140546|Zbtb49|75079|zinc finger and BTB domain containing 49	NM_029162|Zbtb49|75079|zinc finger and BTB domain containing 49	AK044991|Zbtb49|75079|zinc finger and BTB domain containing 49
mm9_v1_chr2_+_72817468_72817530	0.0412854	HIF1A.p2	AK005870|1700011J10Rik|67686|RIKEN cDNA 1700011J10 gene	AK013593|1700011J10Rik|67686|RIKEN cDNA 1700011J10 gene
mm9_v1_chr16_+_84835573_84835671	0.0409484	HIF1A.p2	AK148087|Gabpa|14390|GA repeat binding protein, alpha	AK145838|Gabpa|14390|GA repeat binding protein, alpha
mm9_v1_chr8_-_124175827_124175832	0.0406016	HIF1A.p2	BC132449|Zcchc14|142682|zinc finger, CCHC domain containing 14	BC137853|Zcchc14|142682|zinc finger, CCHC domain containing 14	AB030244|Zcchc14|142682|zinc finger, CCHC domain containing 14	NM_080855|Zcchc14|142682|zinc finger, CCHC domain containing 14
mm9_v1_chr5_+_34326081_34326346	0.0404861	HIF1A.p2	BC147444|Gm1673|381633|predicted gene 1673	BC147468|Gm1673|381633|predicted gene 1673	BC048625|Gm1673|381633|predicted gene 1673	AK141724|Gm1673|381633|predicted gene 1673	NM_001033458|Gm1673|381633|predicted gene 1673	BC100514|Gm1673|381633|predicted gene 1673	BC055794|Gm1673|381633|predicted gene 1673	AK131594|Gm1673|381633|predicted gene 1673
mm9_v1_chr15_+_99556048_99556119	0.0403678	HIF1A.p2	NM_183256|2310016M24Rik|66379|RIKEN cDNA 2310016M24 gene	AK009401|2310016M24Rik|66379|RIKEN cDNA 2310016M24 gene	BC059905|2310016M24Rik|66379|RIKEN cDNA 2310016M24 gene
mm9_v1_chr7_+_133792793_133792915	0.0403046	HIF1A.p2	AK139102|Ccdc101|75565|coiled-coil domain containing 101	NM_029339|Ccdc101|75565|coiled-coil domain containing 101	AK169898|Ccdc101|75565|coiled-coil domain containing 101	BC026784|Ccdc101|75565|coiled-coil domain containing 101	AK006287|Ccdc101|75565|coiled-coil domain containing 101
mm9_v1_chr6_+_117961386_117961396	0.0399683	HIF1A.p2	AK158756|Rasgef1a|70727|RasGEF domain family, member 1A
mm9_v1_chr7_-_149088233_149088349	0.0394588	HIF1A.p2	AK049394|Tollip|54473|toll interacting protein	BC062139|Tollip|54473|toll interacting protein	AK045422|Tollip|54473|toll interacting protein	BC053515|Tollip|54473|toll interacting protein	AK161312|Tollip|54473|toll interacting protein	AJ242971|Tollip|54473|toll interacting protein	AK016482|Tollip|54473|toll interacting protein	NM_023764|Tollip|54473|toll interacting protein	AK078391|Tollip|54473|toll interacting protein	AK049263|Tollip|54473|toll interacting protein
mm9_v1_chr4_-_134409044_134409108	0.0393881	HIF1A.p2	AY364165|Tmem57|66146|transmembrane protein 57	BC054355|Tmem57|66146|transmembrane protein 57	BC010714|Tmem57|66146|transmembrane protein 57
mm9_v1_chr11_+_68913653_68913659	0.0393086	HIF1A.p2	AK148202|Per1|18626|period homolog 1 (Drosophila)	AK172958|Per1|18626|period homolog 1 (Drosophila)	NM_001159367|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr11_+_42233258_42233286	0.0392522	HIF1A.p2	AK090279|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	NM_008070|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	BC145973|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	BC145975|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm9_v1_chr1_-_36426005_36426027	0.0386987	HIF1A.p2	AK030079|4632411B12Rik|226976|RIKEN cDNA 4632411B12 gene	NM_172652|4632411B12Rik|226976|RIKEN cDNA 4632411B12 gene
mm9_v1_chr18_-_80909796_80909814	0.0384685	HIF1A.p2	BC061509|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK048610|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK144965|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164109|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164110|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_198429|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr11_-_120434075_120434180	0.0383944	HIF1A.p2	BC093512|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK168336|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK150755|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	BC008549|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK151351|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr13_-_101322416_101322452	0.0382259	HIF1A.p2	BC138679|Ocln|18260|occludin	BC138680|Ocln|18260|occludin	BC145371|Ocln|18260|occludin	AK042576|Ocln|18260|occludin	NM_008756|Ocln|18260|occludin
mm9_v1_chr9_-_70351160_70351184	0.0381029	HIF1A.p2	BC069835|Rnf111|93836|ring finger 111	AK169999|Rnf111|93836|ring finger 111
mm9_v1_chr2_-_90744808_90744892	0.0380251	HIF1A.p2	AK160888|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC027270|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC119267|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC119269|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	AK002501|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	AK088337|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	NM_026688|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3
mm9_v1_chr5_+_104475948_104476060	0.03778	HIF1A.p2	AK158058|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK004444|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK076500|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_028794|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC033921|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm9_v1_chr2_+_172266042_172266209	0.0376228	HIF1A.p2	AK053258|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK010321|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK077823|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	NM_025542|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK009901|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC049072|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK167287|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK028792|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC004803|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK219307|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK209674|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK169588|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK170141|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK153121|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC096692|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116442|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116443|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC127166|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene
mm9_v1_chr15_-_75672300_75672387	0.0373878	HIF1A.p2	BC060682|Zc3h3|223642|zinc finger CCCH type containing 3	AJ516034|Zc3h3|223642|zinc finger CCCH type containing 3	BC111448|Zc3h3|223642|zinc finger CCCH type containing 3	NM_172121|Zc3h3|223642|zinc finger CCCH type containing 3	AK138281|Zc3h3|223642|zinc finger CCCH type containing 3
mm9_v1_chr8_+_73063553_73063604	0.0370554	HIF1A.p2	NM_007924|Ell|13716|elongation factor RNA polymerase II	AK159027|Ell|13716|elongation factor RNA polymerase II	U80227|Ell|13716|elongation factor RNA polymerase II	BC014816|Ell|13716|elongation factor RNA polymerase II	BC024894|Ell|13716|elongation factor RNA polymerase II
mm9_v1_chr8_+_73224288_73224388	0.037041	HIF1A.p2	AK131827|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr5_-_66543123_66543228	0.0367046	HIF1A.p2	AK170082|Rbm47|245945|RNA binding motif protein 47	NM_001127382|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr17_+_83614611_83614641	0.0362763	HIF1A.p2	NM_134117|Pkdcc|106522|protein kinase domain containing, cytoplasmic	AB381893|Pkdcc|106522|protein kinase domain containing, cytoplasmic	AB436780|Pkdcc|106522|protein kinase domain containing, cytoplasmic	BC086639|Pkdcc|106522|protein kinase domain containing, cytoplasmic
mm9_v1_chr5_-_65782632_65782676	0.0353904	HIF1A.p2	AK168326|Rpl9|20005|ribosomal protein L9	AK017388|Rpl9|20005|ribosomal protein L9	AK053431|Rpl9|20005|ribosomal protein L9	AK169217|Rpl9|20005|ribosomal protein L9	BC086937|Rpl9|20005|ribosomal protein L9	AK012331|Rpl9|20005|ribosomal protein L9	AK012445|Rpl9|20005|ribosomal protein L9	AK017427|Rpl9|20005|ribosomal protein L9	AK084278|Rpl9|20005|ribosomal protein L9	AK088166|Rpl9|20005|ribosomal protein L9	AK153562|Rpl9|20005|ribosomal protein L9	AK159980|Rpl9|20005|ribosomal protein L9	NM_011292|Rpl9|20005|ribosomal protein L9
mm9_v1_chr16_-_20302299_20302462	0.035275	HIF1A.p2	AK039142|Parl|381038|presenilin associated, rhomboid-like	BC083153|Parl|381038|presenilin associated, rhomboid-like	AK151652|Parl|381038|presenilin associated, rhomboid-like	NM_001005767|Parl|381038|presenilin associated, rhomboid-like	AK150980|Parl|381038|presenilin associated, rhomboid-like	AK207637|Parl|381038|presenilin associated, rhomboid-like
mm9_v1_chr12_-_100801791_100801815	0.0348082	HIF1A.p2	AK053772|Foxn3|71375|forkhead box N3
mm9_v1_chr15_-_98593432_98593456	0.0343152	HIF1A.p2	AK195626|Arf3|11842|ADP-ribosylation factor 3
mm9_v1_chr4_-_45024999_45025283	0.0341628	HIF1A.p2	AK160003|Zbtb5|230119|zinc finger and BTB domain containing 5	BC054551|Zbtb5|230119|zinc finger and BTB domain containing 5	AK031172|Zbtb5|230119|zinc finger and BTB domain containing 5	AY635051|Zbtb5|230119|zinc finger and BTB domain containing 5	BC057545|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_001163283|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_001163284|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_173399|Zbtb5|230119|zinc finger and BTB domain containing 5
mm9_v1_chr7_+_26067197_26067278	0.0339782	HIF1A.p2	AK147276|Cic|71722|capicua homolog (Drosophila)	NM_001110131|Cic|71722|capicua homolog (Drosophila)	NM_001110132|Cic|71722|capicua homolog (Drosophila)	NM_027882|Cic|71722|capicua homolog (Drosophila)
mm9_v1_chr2_+_30271579_30271778	0.0338519	HIF1A.p2	AK049184|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC006626|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC052852|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK160980|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AY035997|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK046288|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr7_+_73254341_73254400	0.0337076	HIF1A.p2	AK129255|Chsy1|269941|chondroitin sulfate synthase 1	BC128567|Chsy1|269941|chondroitin sulfate synthase 1	BC153826|Chsy1|269941|chondroitin sulfate synthase 1	BC153827|Chsy1|269941|chondroitin sulfate synthase 1	NM_001081163|Chsy1|269941|chondroitin sulfate synthase 1
mm9_v1_chr11_-_57332054_57332159	0.0330169	HIF1A.p2	BC019518|Fam114a2|67726|family with sequence similarity 114, member A2	AK018570|Fam114a2|67726|family with sequence similarity 114, member A2	AK076316|Fam114a2|67726|family with sequence similarity 114, member A2	AK149763|Fam114a2|67726|family with sequence similarity 114, member A2	AK007968|Fam114a2|67726|family with sequence similarity 114, member A2	NM_001168667|Fam114a2|67726|family with sequence similarity 114, member A2	NM_001168668|Fam114a2|67726|family with sequence similarity 114, member A2	NM_026342|Fam114a2|67726|family with sequence similarity 114, member A2
mm9_v1_chr8_-_86222963_86223117	0.0328759	HIF1A.p2	AK134792|Pkn1|320795|protein kinase N1	BC052923|Pkn1|320795|protein kinase N1	NM_177262|Pkn1|320795|protein kinase N1	AK170556|Pkn1|320795|protein kinase N1	AK050643|Pkn1|320795|protein kinase N1
mm9_v1_chr11_+_77796714_77796777	0.0328557	HIF1A.p2	BC043080|Phf12|268448|PHD finger protein 12
mm9_v1_chr5_-_36022106_36022111	0.0327437	HIF1A.p2	AK020653|Htra3|78558|HtrA serine peptidase 3
mm9_v1_chr5_+_32761610_32761706	0.032209	HIF1A.p2	AK004686|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	M27073|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK160743|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	BC046832|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168512|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK088893|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr17_-_36408313_36408377	0.0313667	HIF1A.p2	AK220298|Trim39|79263|tripartite motif-containing 39	AK145861|Trim39|79263|tripartite motif-containing 39	AK053507|Trim39|79263|tripartite motif-containing 39	NM_178281|Trim39|79263|tripartite motif-containing 39
mm9_v1_chr8_-_93657840_93657925	0.0311746	HIF1A.p2	BC008130|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	Z68183|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	AK146459|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	AK158704|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	BC034861|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein
mm9_v1_chr15_-_64214297_64214312	0.0309397	HIF1A.p2	AF075461|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1	AF075462|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1
mm9_v1_chr12_+_83271002_83271165	0.0302322	HIF1A.p2	NM_001167983|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1	BC058681|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1	AK171876|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1
mm9_v1_chr7_-_29526759_29526858	0.029978	HIF1A.p2	Y11682|Mrps12|24030|mitochondrial ribosomal protein S12	NM_011885|Mrps12|24030|mitochondrial ribosomal protein S12	BC027522|Mrps12|24030|mitochondrial ribosomal protein S12	AK146730|Mrps12|24030|mitochondrial ribosomal protein S12
mm9_v1_chr10_-_120416369_120416397	0.0297813	HIF1A.p2	AF112300|Lemd3|380664|LEM domain containing 3	NM_001081193|Lemd3|380664|LEM domain containing 3
mm9_v1_chr3_+_107081775_107081924	0.0297286	HIF1A.p2	NM_026774|Hbxip|68576|hepatitis B virus x interacting protein	AK146289|Hbxip|68576|hepatitis B virus x interacting protein
mm9_v1_chr2_+_146047656_146047846	0.0296954	HIF1A.p2	BC051240|Insm1|53626|insulinoma-associated 1	NM_016889|Insm1|53626|insulinoma-associated 1	AF044669|Insm1|53626|insulinoma-associated 1	BC082809|Insm1|53626|insulinoma-associated 1
mm9_v1_chr6_+_49269351_49269403	0.029611	HIF1A.p2	AK018135|Ccdc126|57895|coiled-coil domain containing 126	NM_175098|Ccdc126|57895|coiled-coil domain containing 126	BC117837|Ccdc126|57895|coiled-coil domain containing 126
mm9_v1_chr5_-_137755938_137756050	0.0295811	HIF1A.p2	
mm9_v1_chr11_-_85048228_85048358	0.0295739	HIF1A.p2	AK122222|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK132963|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK005440|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm9_v1_chr2_+_156688814_156688934	0.0294244	HIF1A.p2	NM_026124|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK003568|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK078178|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK031002|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK002452|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK155559|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	BC019445|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene
mm9_v1_chr3_-_51200423_51200468	0.0293594	HIF1A.p2	BC022740|4930583H14Rik|67749|RIKEN cDNA 4930583H14 gene	AK006339|4930583H14Rik|67749|RIKEN cDNA 4930583H14 gene	BC049556|4930583H14Rik|67749|RIKEN cDNA 4930583H14 gene	AK016342|4930583H14Rik|67749|RIKEN cDNA 4930583H14 gene	AF228502|4930583H14Rik|67749|RIKEN cDNA 4930583H14 gene	AK151401|4930583H14Rik|67749|RIKEN cDNA 4930583H14 gene	BC012511|4930583H14Rik|67749|RIKEN cDNA 4930583H14 gene	NM_026358|4930583H14Rik|67749|RIKEN cDNA 4930583H14 gene
mm9_v1_chr5_+_110564841_110564902	0.0293105	HIF1A.p2	NM_172717|Chfr|231600|checkpoint with forkhead and ring finger domains	AK039281|Chfr|231600|checkpoint with forkhead and ring finger domains	AK133154|Chfr|231600|checkpoint with forkhead and ring finger domains	AK154038|Chfr|231600|checkpoint with forkhead and ring finger domains	AK048930|Chfr|231600|checkpoint with forkhead and ring finger domains	AK147892|Chfr|231600|checkpoint with forkhead and ring finger domains	AK077629|Chfr|231600|checkpoint with forkhead and ring finger domains	AK148436|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155295|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155525|Chfr|231600|checkpoint with forkhead and ring finger domains	AK052473|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169193|Chfr|231600|checkpoint with forkhead and ring finger domains	BC049792|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169182|Chfr|231600|checkpoint with forkhead and ring finger domains
mm9_v1_chr3_-_52821116_52821157	0.0292933	HIF1A.p2	AB093286|Cog6|67542|component of oligomeric golgi complex 6	AK048986|Cog6|67542|component of oligomeric golgi complex 6	AK153320|Cog6|67542|component of oligomeric golgi complex 6	AK031149|Cog6|67542|component of oligomeric golgi complex 6	AK045223|Cog6|67542|component of oligomeric golgi complex 6	NM_026225|Cog6|67542|component of oligomeric golgi complex 6	AK016663|Cog6|67542|component of oligomeric golgi complex 6
mm9_v1_chr4_-_128287236_128287341	0.0290591	HIF1A.p2	BC076602|Zscan20|269585|zinc finger and SCAN domains 20	AK047820|Zscan20|269585|zinc finger and SCAN domains 20	AK153688|Zscan20|269585|zinc finger and SCAN domains 20	AK153845|Zscan20|269585|zinc finger and SCAN domains 20	AK144249|Zscan20|269585|zinc finger and SCAN domains 20	NM_177758|Zscan20|269585|zinc finger and SCAN domains 20
mm9_v1_chr7_-_88599560_88599643	0.0289462	HIF1A.p2	BC125476|Cpeb1|12877|cytoplasmic polyadenylation element binding protein 1	BC144948|Cpeb1|12877|cytoplasmic polyadenylation element binding protein 1	NM_007755|Cpeb1|12877|cytoplasmic polyadenylation element binding protein 1	Y08260|Cpeb1|12877|cytoplasmic polyadenylation element binding protein 1	AK136088|Cpeb1|12877|cytoplasmic polyadenylation element binding protein 1
mm9_v1_chr6_-_97098845_97098885	0.0288135	HIF1A.p2	AK037507|A130022J15Rik|101351|RIKEN cDNA A130022J15 gene	NM_175313|A130022J15Rik|101351|RIKEN cDNA A130022J15 gene
mm9_v1_chr7_-_86611065_86611158	0.0282223	HIF1A.p2	BC080291|Polg|18975|polymerase (DNA directed), gamma	BC061472|Polg|18975|polymerase (DNA directed), gamma	AK135341|Polg|18975|polymerase (DNA directed), gamma	U53584|Polg|18975|polymerase (DNA directed), gamma	AK133584|Polg|18975|polymerase (DNA directed), gamma	BC053024|Polg|18975|polymerase (DNA directed), gamma	AK148091|Polg|18975|polymerase (DNA directed), gamma	NM_017462|Polg|18975|polymerase (DNA directed), gamma
mm9_v1_chr9_-_44226119_44226149	0.0279527	HIF1A.p2	AK162606|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr10_-_60215512_60215513	0.0279155	HIF1A.p2	BC137864|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	BC144983|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3
mm9_v1_chr1_-_163806710_163806814	0.0277882	HIF1A.p2	BC138379|AI848100|226551|expressed sequence AI848100	AK171856|AI848100|226551|expressed sequence AI848100	NM_172645|AI848100|226551|expressed sequence AI848100
mm9_v1_chr2_+_155343804_155343878	0.0277802	HIF1A.p2	AK053877|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK086921|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK041520|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK029014|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AF216873|Acss2|60525|acyl-CoA synthetase short-chain family member 2	BC040790|Acss2|60525|acyl-CoA synthetase short-chain family member 2
mm9_v1_chr6_+_49023793_49023864	0.0276785	HIF1A.p2	NM_029353|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK031878|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK153503|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK010366|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene
mm9_v1_chr7_-_108011836_108011877	0.0273789	HIF1A.p2	BC131929|Relt|320100|RELT tumor necrosis factor receptor	BC131931|Relt|320100|RELT tumor necrosis factor receptor	BC145200|Relt|320100|RELT tumor necrosis factor receptor
mm9_v1_chr11_-_5662259_5662400	0.0271787	HIF1A.p2	BC066994|Urgcp|72046|upregulator of cell proliferation	AK035580|Urgcp|72046|upregulator of cell proliferation	AK041953|Urgcp|72046|upregulator of cell proliferation	NM_001077661|Urgcp|72046|upregulator of cell proliferation	AK037923|Urgcp|72046|upregulator of cell proliferation	AK053862|Urgcp|72046|upregulator of cell proliferation
mm9_v1_chr1_+_60466620_60466646	0.0263248	HIF1A.p2	AK081803|Abi2|329165|abl-interactor 2	BC056345|Abi2|329165|abl-interactor 2
mm9_v1_chr5_-_145017034_145017054	0.026097	HIF1A.p2	AK013828|2900089D17Rik|67277|RIKEN cDNA 2900089D17 gene	AK019366|2900089D17Rik|67277|RIKEN cDNA 2900089D17 gene
mm9_v1_chr4_-_137923869_137923874	0.0260743	HIF1A.p2	BC050114|Cda|72269|cytidine deaminase	NM_028176|Cda|72269|cytidine deaminase	AK008793|Cda|72269|cytidine deaminase
mm9_v1_chr2_+_122456336_122456409	0.0260598	HIF1A.p2	AK169460|Spata5l1|214616|spermatogenesis associated 5-like 1	AK048180|Spata5l1|214616|spermatogenesis associated 5-like 1	AK133972|Spata5l1|214616|spermatogenesis associated 5-like 1
mm9_v1_chr5_+_141717417_141717443	0.0260014	HIF1A.p2	AK147578|Sdk1|330222|sidekick homolog 1 (chicken)
mm9_v1_chr10_-_83996516_83996534	0.025952	HIF1A.p2	AK030708|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr18_+_58819093_58819192	0.0256794	HIF1A.p2	AK165542|Isoc1|66307|isochorismatase domain containing 1	BC016576|Isoc1|66307|isochorismatase domain containing 1	AY035213|Isoc1|66307|isochorismatase domain containing 1	NM_025478|Isoc1|66307|isochorismatase domain containing 1	AK134794|Isoc1|66307|isochorismatase domain containing 1	AK152763|Isoc1|66307|isochorismatase domain containing 1	AK153257|Isoc1|66307|isochorismatase domain containing 1
mm9_v1_chr16_+_33829715_33830005	0.0255911	HIF1A.p2	AF022110|Itgb5|16419|integrin beta 5	NM_001145884|Itgb5|16419|integrin beta 5	NM_010580|Itgb5|16419|integrin beta 5	BC058246|Itgb5|16419|integrin beta 5	AK143532|Itgb5|16419|integrin beta 5	AK140251|Itgb5|16419|integrin beta 5	BC046280|Itgb5|16419|integrin beta 5	AF043256|Itgb5|16419|integrin beta 5	AF043257|Itgb5|16419|integrin beta 5	AK087476|Itgb5|16419|integrin beta 5
mm9_v1_chr4_+_33397279_33397404	0.02546	HIF1A.p2	AK151463|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	NM_011884|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK150497|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160007|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK002922|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK079488|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK142016|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160706|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	BC043657|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK169305|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF034568|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF025653|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase
mm9_v1_chr8_+_74685098_74685285	0.0254558	HIF1A.p2	NM_023126|Rab8a|17274|RAB8A, member RAS oncogene family	AK076048|Rab8a|17274|RAB8A, member RAS oncogene family	AK147178|Rab8a|17274|RAB8A, member RAS oncogene family	AK079306|Rab8a|17274|RAB8A, member RAS oncogene family	S53270|Rab8a|17274|RAB8A, member RAS oncogene family	AK009259|Rab8a|17274|RAB8A, member RAS oncogene family	AK010862|Rab8a|17274|RAB8A, member RAS oncogene family	AK080740|Rab8a|17274|RAB8A, member RAS oncogene family	AK165690|Rab8a|17274|RAB8A, member RAS oncogene family	AB232600|Rab8a|17274|RAB8A, member RAS oncogene family	BC019990|Rab8a|17274|RAB8A, member RAS oncogene family	AY974570|Rab8a|17274|RAB8A, member RAS oncogene family
mm9_v1_chr13_+_55423357_55423417	0.0252742	HIF1A.p2	AK146857|Prelid1|66494|PRELI domain containing 1	AK153455|Prelid1|66494|PRELI domain containing 1	AK002846|Prelid1|66494|PRELI domain containing 1	AK150465|Prelid1|66494|PRELI domain containing 1	AK151321|Prelid1|66494|PRELI domain containing 1	AK155042|Prelid1|66494|PRELI domain containing 1	AK012144|Prelid1|66494|PRELI domain containing 1	BC025859|Prelid1|66494|PRELI domain containing 1	NM_025596|Prelid1|66494|PRELI domain containing 1	BC098241|Prelid1|66494|PRELI domain containing 1
mm9_v1_chr1_+_57463391_57463391	0.0250657	HIF1A.p2	AK079116|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	NM_001081181|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene
mm9_v1_chr3_+_87710417_87710583	0.0248999	HIF1A.p2	AK076021|Hdgf|15191|hepatoma-derived growth factor	AK005359|Hdgf|15191|hepatoma-derived growth factor	D63707|Hdgf|15191|hepatoma-derived growth factor	AK029475|Hdgf|15191|hepatoma-derived growth factor
mm9_v1_chr8_+_107064705_107064811	0.0245852	HIF1A.p2	AK090390|Car7|12354|carbonic anhydrase 7	AY075021|Car7|12354|carbonic anhydrase 7	NM_053070|Car7|12354|carbonic anhydrase 7	BC094913|Car7|12354|carbonic anhydrase 7	AF291660|Car7|12354|carbonic anhydrase 7
mm9_v1_chr16_+_45158927_45158941	0.0245074	HIF1A.p2	AK005266|Atg3|67841|autophagy-related 3 (yeast)	AK011409|Atg3|67841|autophagy-related 3 (yeast)	AK150914|Atg3|67841|autophagy-related 3 (yeast)	AK159231|Atg3|67841|autophagy-related 3 (yeast)	NM_026402|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr8_+_13288180_13288277	0.0234102	HIF1A.p2	AK083321|Tmco3|234076|transmembrane and coiled-coil domains 3	AK163479|Tmco3|234076|transmembrane and coiled-coil domains 3	AK148252|Tmco3|234076|transmembrane and coiled-coil domains 3	AK046065|Tmco3|234076|transmembrane and coiled-coil domains 3	AK088866|Tmco3|234076|transmembrane and coiled-coil domains 3	BC053487|Tmco3|234076|transmembrane and coiled-coil domains 3	AK033499|Tmco3|234076|transmembrane and coiled-coil domains 3	AK049974|Tmco3|234076|transmembrane and coiled-coil domains 3	BC039955|Tmco3|234076|transmembrane and coiled-coil domains 3
mm9_v1_chr3_-_88753853_88753947	0.0232991	HIF1A.p2	AK014280|Dap3|65111|death associated protein 3	AK014889|Dap3|65111|death associated protein 3	AK088960|Dap3|65111|death associated protein 3	AK032275|Dap3|65111|death associated protein 3	AJ250375|Dap3|65111|death associated protein 3
mm9_v1_chr11_+_68912444_68912492	0.023158	HIF1A.p2	NM_011065|Per1|18626|period homolog 1 (Drosophila)	BC091645|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chrX_+_45695231_45695333	0.0229052	HIF1A.p2	AK020114|Bcorl1|320376|BCL6 co-repressor-like 1
mm9_v1_chr5_-_23218477_23218493	0.0228215	HIF1A.p2	AK089743|AI506816|433855|expressed sequence AI506816	AK157274|AI506816|433855|expressed sequence AI506816	AK161191|AI506816|433855|expressed sequence AI506816	AK088877|AI506816|433855|expressed sequence AI506816	AK151523|AI506816|433855|expressed sequence AI506816
mm9_v1_chr19_+_4148636_4148721	0.0226542	HIF1A.p2	AK149639|Coro1b|23789|coronin, actin binding protein 1B	AF143956|Coro1b|23789|coronin, actin binding protein 1B	NM_011778|Coro1b|23789|coronin, actin binding protein 1B	BC029326|Coro1b|23789|coronin, actin binding protein 1B	BC131944|Coro1b|23789|coronin, actin binding protein 1B	BC132617|Coro1b|23789|coronin, actin binding protein 1B
mm9_v1_chr16_-_85173930_85173941	0.0226542	HIF1A.p2	AK159718|App|11820|amyloid beta (A4) precursor protein	M18373|App|11820|amyloid beta (A4) precursor protein	U84012|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr8_+_3676454_3676539	0.0222541	HIF1A.p2	AK076212|Trappc5|66682|trafficking protein particle complex 5	NM_025701|Trappc5|66682|trafficking protein particle complex 5	AK003633|Trappc5|66682|trafficking protein particle complex 5	AK007989|Trappc5|66682|trafficking protein particle complex 5	AK171833|Trappc5|66682|trafficking protein particle complex 5	AK078451|Trappc5|66682|trafficking protein particle complex 5	BC049179|Trappc5|66682|trafficking protein particle complex 5
mm9_v1_chr9_-_20682520_20682531	0.0219325	HIF1A.p2	AK018113|Angptl6|70726|angiopoietin-like 6
mm9_v1_chr2_-_163245205_163245247	0.0218914	HIF1A.p2	BC005579|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	NM_025699|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK009708|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK014323|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK088622|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK153499|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK006969|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene
mm9_v1_chr10_+_127814144_127814228	0.0218674	HIF1A.p2	AK144017|Ankrd52|237615|ankyrin repeat domain 52	AK032429|Ankrd52|237615|ankyrin repeat domain 52	NM_172790|Ankrd52|237615|ankyrin repeat domain 52	AK090124|Ankrd52|237615|ankyrin repeat domain 52	AK035533|Ankrd52|237615|ankyrin repeat domain 52	BC117907|Ankrd52|237615|ankyrin repeat domain 52	BC117908|Ankrd52|237615|ankyrin repeat domain 52
mm9_v1_chr1_+_74283113_74283139	0.0217696	HIF1A.p2	AK170061|Arpc2|76709|actin related protein 2/3 complex, subunit 2	NM_029711|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr16_+_18877336_18877523	0.021682	HIF1A.p2	X92590|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X75295|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X99712|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)
mm9_v1_chr12_+_81619976_81620155	0.0214095	HIF1A.p2	NM_001081421|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB045325|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK138883|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB175683|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
mm9_v1_chr1_-_181733742_181733841	0.0213707	HIF1A.p2	BC138343|Ahctf1|226747|AT hook containing transcription factor 1	BC138344|Ahctf1|226747|AT hook containing transcription factor 1	AB059278|Ahctf1|226747|AT hook containing transcription factor 1
mm9_v1_chr17_+_28046196_28046431	0.021269	HIF1A.p2	BC050847|Anks1|224650|ankyrin repeat and SAM domain containing 1	NM_181413|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK129094|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK147273|Anks1|224650|ankyrin repeat and SAM domain containing 1
mm9_v1_chr1_-_57463278_57463380	0.0210779	HIF1A.p2	BC099495|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	BC058590|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	BC132289|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	BC144765|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	BC144766|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	AK139666|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene
mm9_v1_chr13_-_99585065_99585195	0.0208253	HIF1A.p2	AK142282|Fcho2|218503|FCH domain only 2	BC052456|Fcho2|218503|FCH domain only 2	BC053718|Fcho2|218503|FCH domain only 2	AK146566|Fcho2|218503|FCH domain only 2	AK164135|Fcho2|218503|FCH domain only 2	BC019933|Fcho2|218503|FCH domain only 2	BC047122|Fcho2|218503|FCH domain only 2
mm9_v1_chr1_-_158869650_158869756	0.0206301	HIF1A.p2	BC043132|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	BC052663|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK169368|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK018622|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029049|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK033549|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK161080|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029993|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK036803|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159965|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159967|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159968|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_023884|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr2_-_44965866_44965983	0.0203711	HIF1A.p2	AK122312|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535781|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535783|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr7_+_86956134_86956146	0.020327	HIF1A.p2	AK146740|Mesp2|17293|mesoderm posterior 2
mm9_v1_chr17_+_24889931_24889960	0.0201691	HIF1A.p2	AK146974|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	AY574375|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	NM_001012402|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC132520|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC138814|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC145424|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6
mm9_v1_chr3_+_40549303_40549442	0.0200519	HIF1A.p2	AK163459|Hspa4l|18415|heat shock protein 4 like	U23921|Hspa4l|18415|heat shock protein 4 like
mm9_v1_chr11_-_70817905_70817971	0.0197617	HIF1A.p2	BC027842|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	BC052172|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK035177|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_178367|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK087592|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33
mm9_v1_chr1_-_74331210_74331311	0.0196145	HIF1A.p2	AK151820|Aamp|227290|angio-associated migratory protein	AK167621|Aamp|227290|angio-associated migratory protein	AK162750|Aamp|227290|angio-associated migratory protein	AK146470|Aamp|227290|angio-associated migratory protein	NM_001190444|Aamp|227290|angio-associated migratory protein	NM_146110|Aamp|227290|angio-associated migratory protein
mm9_v1_chr15_-_77759356_77759437	0.0193699	HIF1A.p2	AK167925|Txn2|56551|thioredoxin 2	U85089|Txn2|56551|thioredoxin 2	AK167754|Txn2|56551|thioredoxin 2	AK168322|Txn2|56551|thioredoxin 2	AK002358|Txn2|56551|thioredoxin 2	AK147164|Txn2|56551|thioredoxin 2	AK090199|Txn2|56551|thioredoxin 2	AK149855|Txn2|56551|thioredoxin 2	BC068182|Txn2|56551|thioredoxin 2	AK010917|Txn2|56551|thioredoxin 2	NM_019913|Txn2|56551|thioredoxin 2	AK160591|Txn2|56551|thioredoxin 2
mm9_v1_chr11_-_116976291_116976337	0.019267	HIF1A.p2	
mm9_v1_chr12_-_99497498_99497616	0.0192492	HIF1A.p2	AK077475|Galc|14420|galactosylceramidase	BC065140|Galc|14420|galactosylceramidase	BC086671|Galc|14420|galactosylceramidase	NM_008079|Galc|14420|galactosylceramidase	AK165478|Galc|14420|galactosylceramidase	D38557|Galc|14420|galactosylceramidase
mm9_v1_chr12_-_15823590_15823683	0.0192488	HIF1A.p2	NM_144551|Trib2|217410|tribbles homolog 2 (Drosophila)	AK144192|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr19_+_11986907_11986958	0.018859	HIF1A.p2	AK087559|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK170745|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK170408|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK154873|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK085013|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	BC058941|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)
mm9_v1_chr5_+_147760198_147760451	0.0187039	HIF1A.p2	NM_025652|Gtf3a|66596|general transcription factor III A	AF391799|Gtf3a|66596|general transcription factor III A	AK008247|Gtf3a|66596|general transcription factor III A	AK011845|Gtf3a|66596|general transcription factor III A	AK143627|Gtf3a|66596|general transcription factor III A	AK012797|Gtf3a|66596|general transcription factor III A	AK017234|Gtf3a|66596|general transcription factor III A	AK183221|Gtf3a|66596|general transcription factor III A
mm9_v1_chr16_+_58670320_58670440	0.0186837	HIF1A.p2	NM_007757|Cpox|12892|coproporphyrinogen oxidase	D16333|Cpox|12892|coproporphyrinogen oxidase	AK157277|Cpox|12892|coproporphyrinogen oxidase
mm9_v1_chr5_-_3596078_3596116	0.0185578	HIF1A.p2	AK047811|C030048B08Rik|269623|RIKEN cDNA C030048B08 gene	AK041876|C030048B08Rik|269623|RIKEN cDNA C030048B08 gene
mm9_v1_chr8_+_123640069_123640092	0.0185359	HIF1A.p2	AK076319|Foxc2|14234|forkhead box C2	AK146887|Foxc2|14234|forkhead box C2	NM_013519|Foxc2|14234|forkhead box C2	X74040|Foxc2|14234|forkhead box C2
mm9_v1_chr11_+_86298106_86298244	0.0184473	HIF1A.p2	AK036401|Rnft1|76892|ring finger protein, transmembrane 1	NM_029788|Rnft1|76892|ring finger protein, transmembrane 1	AK171077|Rnft1|76892|ring finger protein, transmembrane 1	AK153293|Rnft1|76892|ring finger protein, transmembrane 1	BC050796|Rnft1|76892|ring finger protein, transmembrane 1	AK002624|Rnft1|76892|ring finger protein, transmembrane 1
mm9_v1_chr15_+_60654507_60654541	0.0182515	HIF1A.p2	AK050709|9930014A18Rik|320469|RIKEN cDNA 9930014A18 gene	AK046554|9930014A18Rik|320469|RIKEN cDNA 9930014A18 gene
mm9_v1_chr11_-_83882063_83882095	0.0175061	HIF1A.p2	AK166840|Dusp14|56405|dual specificity phosphatase 14	BC052836|Dusp14|56405|dual specificity phosphatase 14
mm9_v1_chr4_-_46548933_46549015	0.0171653	HIF1A.p2	AK133220|Trim14|74735|tripartite motif-containing 14	AK148837|Trim14|74735|tripartite motif-containing 14	AK017887|Trim14|74735|tripartite motif-containing 14	AK172895|Trim14|74735|tripartite motif-containing 14	AK076277|Trim14|74735|tripartite motif-containing 14	BC116738|Trim14|74735|tripartite motif-containing 14	BC119130|Trim14|74735|tripartite motif-containing 14	AB117644|Trim14|74735|tripartite motif-containing 14	NM_029077|Trim14|74735|tripartite motif-containing 14
mm9_v1_chr18_-_52688607_52688694	0.0170685	HIF1A.p2	AK135213|Lox|16948|lysyl oxidase
mm9_v1_chr8_+_109580775_109580831	0.016446	HIF1A.p2	AK003739|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	NM_001164472|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	NM_025391|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	BC003972|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	AK006057|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	AK014290|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)
mm9_v1_chr2_-_168781086_168781086	0.0161257	HIF1A.p2	NM_009564|Zfp64|22722|zinc finger protein 64
mm9_v1_chr10_+_12810660_12810714	0.0158958	HIF1A.p2	X95503|Plagl1|22634|pleiomorphic adenoma gene-like 1
mm9_v1_chr8_+_63471991_63472061	0.0158916	HIF1A.p2	AK173292|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AY850065|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	NM_175089|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK077047|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK045202|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC070443|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC157939|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC158009|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC172091|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1
mm9_v1_chr2_+_52601476_52601507	0.015679	HIF1A.p2	
mm9_v1_chr9_-_116084154_116084277	0.015668	HIF1A.p2	AF406755|Tgfbr2|21813|transforming growth factor, beta receptor II	S69114|Tgfbr2|21813|transforming growth factor, beta receptor II
mm9_v1_chr12_+_88488644_88488668	0.0155103	HIF1A.p2	BC031777|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	NM_010363|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr3_-_88754154_88754203	0.0154637	HIF1A.p2	BC019566|Dap3|65111|death associated protein 3	NM_001164533|Dap3|65111|death associated protein 3	NM_022994|Dap3|65111|death associated protein 3
mm9_v1_chr11_-_69615126_69615217	0.0153725	HIF1A.p2	NM_010198|Fgf11|14166|fibroblast growth factor 11	U66203|Fgf11|14166|fibroblast growth factor 11	BC066859|Fgf11|14166|fibroblast growth factor 11
mm9_v1_chr1_+_95375503_95375639	0.0147974	HIF1A.p2	NM_001159717|Sept2|18000|septin 2	NM_001159718|Sept2|18000|septin 2	NM_010891|Sept2|18000|septin 2	AK146616|Sept2|18000|septin 2	AK151591|Sept2|18000|septin 2	AK028072|Sept2|18000|septin 2	AK171331|Sept2|18000|septin 2	D49382|Sept2|18000|septin 2	NM_001159719|Sept2|18000|septin 2
mm9_v1_chr2_+_180317427_180317498	0.0147633	HIF1A.p2	AK052575|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC085320|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	AK038431|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	AK005551|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC042508|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC110993|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC054431|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene
mm9_v1_chr3_+_144233390_144233449	0.014749	HIF1A.p2	NM_053102|Sep15|93684|selenoprotein	AF288740|Sep15|93684|selenoprotein
mm9_v1_chr3_+_126066744_126066789	0.0145496	HIF1A.p2	AK034584|Arsj|271970|arylsulfatase J	AK034454|Arsj|271970|arylsulfatase J	NM_173451|Arsj|271970|arylsulfatase J	AK046410|Arsj|271970|arylsulfatase J	AK052931|Arsj|271970|arylsulfatase J
mm9_v1_chr15_+_80004048_80004240	0.0140656	HIF1A.p2	AK081850|Mgat3|17309|mannoside acetylglucosaminyltransferase 3	NM_010795|Mgat3|17309|mannoside acetylglucosaminyltransferase 3	BC053040|Mgat3|17309|mannoside acetylglucosaminyltransferase 3
mm9_v1_chr9_+_58884368_58884381	0.013714	HIF1A.p2	
mm9_v1_chr10_-_62113897_62113922	0.0135381	HIF1A.p2	BC075714|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	BC071265|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
mm9_v1_chrX_-_34442837_34442864	0.0133821	HIF1A.p2	AK020455|Nkrf|77286|NF-kappaB repressing factor	BC138828|Nkrf|77286|NF-kappaB repressing factor	BC138829|Nkrf|77286|NF-kappaB repressing factor
mm9_v1_chr1_+_74818463_74818531	0.013349	HIF1A.p2	AK133954|Wnt6|22420|wingless-related MMTV integration site 6	NM_009526|Wnt6|22420|wingless-related MMTV integration site 6	BC048700|Wnt6|22420|wingless-related MMTV integration site 6
mm9_v1_chr5_-_73647663_73647809	0.0133404	HIF1A.p2	AK033493|Fryl|72313|furry homolog-like (Drosophila)	AK038719|Fryl|72313|furry homolog-like (Drosophila)
mm9_v1_chr18_-_60783889_60783905	0.0129565	HIF1A.p2	AK158933|Synpo|104027|synaptopodin	AK171288|Synpo|104027|synaptopodin
mm9_v1_chr4_-_126106749_126106807	0.0126668	HIF1A.p2	AK035042|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK083652|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK171118|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK154436|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	NM_153402|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3
mm9_v1_chr12_-_70994089_70994191	0.0122931	HIF1A.p2	BC048173|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK045031|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK053775|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	NM_201519|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr9_+_77602582_77602622	0.0122251	HIF1A.p2	AK160876|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	BC019374|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	NM_010295|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	U85414|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	U85498|Gclc|14629|glutamate-cysteine ligase, catalytic subunit
mm9_v1_chr6_+_65728933_65728994	0.0120779	HIF1A.p2	NM_027547|Prdm5|70779|PR domain containing 5	BC138901|Prdm5|70779|PR domain containing 5	BC138902|Prdm5|70779|PR domain containing 5
mm9_v1_chr5_+_65782735_65782836	0.0119351	HIF1A.p2	AK077192|Lias|79464|lipoic acid synthetase	NM_024471|Lias|79464|lipoic acid synthetase	AK031851|Lias|79464|lipoic acid synthetase	AK013575|Lias|79464|lipoic acid synthetase	AK048744|Lias|79464|lipoic acid synthetase	BC002141|Lias|79464|lipoic acid synthetase	AK049548|Lias|79464|lipoic acid synthetase	AB057731|Lias|79464|lipoic acid synthetase	AK045167|Lias|79464|lipoic acid synthetase
mm9_v1_chr2_-_118982714_118982769	0.011879	HIF1A.p2	BC061186|Fam82a2|67809|family with sequence similarity 82, member A2	AK171770|Fam82a2|67809|family with sequence similarity 82, member A2	NM_001033136|Fam82a2|67809|family with sequence similarity 82, member A2
mm9_v1_chr13_-_55589377_55589460	0.0113097	HIF1A.p2	AK132060|Dbn1|56320|drebrin 1	AK162697|Dbn1|56320|drebrin 1	AB064321|Dbn1|56320|drebrin 1	AF187147|Dbn1|56320|drebrin 1	AF187148|Dbn1|56320|drebrin 1	NM_001177371|Dbn1|56320|drebrin 1	NM_001177372|Dbn1|56320|drebrin 1	NM_019813|Dbn1|56320|drebrin 1
mm9_v1_chr11_-_53705199_53705212	0.011212	HIF1A.p2	AK140640|Slc22a5|20520|solute carrier family 22 (organic cation transporter), member 5	NM_011396|Slc22a5|20520|solute carrier family 22 (organic cation transporter), member 5
mm9_v1_chr2_-_120803594_120803609	0.0109332	HIF1A.p2	
mm9_v1_chr5_-_28117963_28118089	0.0104271	HIF1A.p2	AF104261|Paxip1|55982|PAX interacting (with transcription-activation domain) protein 1
mm9_v1_chr2_+_112105869_112105981	0.0104258	HIF1A.p2	AK133006|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr8_-_127245800_127245897	0.010215	HIF1A.p2	AK212172|Ttc13|234875|tetratricopeptide repeat domain 13	BC079851|Ttc13|234875|tetratricopeptide repeat domain 13	BC072577|Ttc13|234875|tetratricopeptide repeat domain 13	AK148102|Ttc13|234875|tetratricopeptide repeat domain 13	AK144842|Ttc13|234875|tetratricopeptide repeat domain 13	NM_145607|Ttc13|234875|tetratricopeptide repeat domain 13	AK051200|Ttc13|234875|tetratricopeptide repeat domain 13	AK160894|Ttc13|234875|tetratricopeptide repeat domain 13
mm9_v1_chr12_+_17551678_17551699	0.0100922	HIF1A.p2	NM_013614|Odc1|18263|ornithine decarboxylase, structural 1
mm9_v1_chr11_+_71564481_71564540	0.00967572	HIF1A.p2	BC030477|Wscd1|216881|WSC domain containing 1
mm9_v1_chr9_-_44575861_44575929	0.0096395	HIF1A.p2	BC034754|Arcn1|213827|archain 1	BC083152|Arcn1|213827|archain 1	BC017124|Arcn1|213827|archain 1	AK031385|Arcn1|213827|archain 1	BC033387|Arcn1|213827|archain 1	NM_145985|Arcn1|213827|archain 1	AK154066|Arcn1|213827|archain 1	AK028556|Arcn1|213827|archain 1	AK128973|Arcn1|213827|archain 1	BC023728|Arcn1|213827|archain 1	AK147747|Arcn1|213827|archain 1	AK047995|Arcn1|213827|archain 1
mm9_v1_chr11_+_78075242_78075302	0.00953509	HIF1A.p2	AK150829|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	NM_001002004|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC080706|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	AK149719|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC075633|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC019798|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene
mm9_v1_chr4_+_129190877_129190896	0.00941306	HIF1A.p2	AK079390|Marcksl1|17357|MARCKS-like 1	AK150261|Marcksl1|17357|MARCKS-like 1	AK152990|Marcksl1|17357|MARCKS-like 1	AK169355|Marcksl1|17357|MARCKS-like 1	X61399|Marcksl1|17357|MARCKS-like 1	BC006757|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr17_+_4995073_4995073	0.00889523	HIF1A.p2	NM_001085355|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr9_+_100978450_100978485	0.00846286	HIF1A.p2	NM_001100451|Msl2|77853|male-specific lethal 2 homolog (Drosophila)	BC070432|Msl2|77853|male-specific lethal 2 homolog (Drosophila)
mm9_v1_chr12_+_88488691_88488760	0.00841927	HIF1A.p2	AK002398|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	AK075927|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	AF093418|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr13_-_31065909_31065982	0.00824753	HIF1A.p2	BC048154|Exoc2|66482|exocyst complex component 2	BC049102|Exoc2|66482|exocyst complex component 2	NM_025588|Exoc2|66482|exocyst complex component 2	AK050068|Exoc2|66482|exocyst complex component 2	AK032766|Exoc2|66482|exocyst complex component 2	AK042744|Exoc2|66482|exocyst complex component 2
mm9_v1_chrX_+_68809163_68809181	0.00818093	HIF1A.p2	NM_008253|Hmgb3|15354|high mobility group box 3	AK032163|Hmgb3|15354|high mobility group box 3
mm9_v1_chr1_+_173341438_173341535	0.00800757	HIF1A.p2	AK142437|Usf1|22278|upstream transcription factor 1	BC049784|Usf1|22278|upstream transcription factor 1
mm9_v1_chr5_+_23356371_23356439	0.00797506	HIF1A.p2	AK002390|2700038G22Rik|67194|RIKEN cDNA 2700038G22 gene
mm9_v1_chr9_-_106340536_106340558	0.00791025	HIF1A.p2	AK002423|Acy1|109652|aminoacylase 1	BC005631|Acy1|109652|aminoacylase 1
mm9_v1_chr3_-_135354500_135354532	0.0076326	HIF1A.p2	BC050841|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	NM_008689|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr1_+_89749844_89749886	0.00760065	HIF1A.p2	NM_177646|Dgkd|227333|diacylglycerol kinase, delta
mm9_v1_chr8_+_72758479_72758521	0.00696716	HIF1A.p2	AK137294|Sugp2|234373|SURP and G patch domain containing 2
mm9_v1_chr6_+_31348811_31348859	0.00695999	HIF1A.p2	AK037967|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	NM_013791|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK165239|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK077541|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK164822|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	BC013703|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK171980|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	U72194|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK155457|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs
mm9_v1_chr17_+_8138805_8138869	0.00694144	HIF1A.p2	BC054439|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	BC085294|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)	AK007979|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)
mm9_v1_chr11_+_88860710_88860807	0.00680826	HIF1A.p2	AK169562|Trim25|217069|tripartite motif-containing 25	NM_009546|Trim25|217069|tripartite motif-containing 25	AK154533|Trim25|217069|tripartite motif-containing 25	BC006908|Trim25|217069|tripartite motif-containing 25	BC034276|Trim25|217069|tripartite motif-containing 25	AK160898|Trim25|217069|tripartite motif-containing 25	AK172555|Trim25|217069|tripartite motif-containing 25	D63902|Trim25|217069|tripartite motif-containing 25
mm9_v1_chr1_-_187153269_187153279	0.00655323	HIF1A.p2	AK085714|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK043590|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK048653|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK078183|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	NM_198653|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial
mm9_v1_chr9_+_30838262_30838280	0.00646942	HIF1A.p2	
mm9_v1_chr17_-_39981857_39981875	0.00630712	HIF1A.p2	
mm9_v1_chr3_-_97571876_97571890	0.00617919	HIF1A.p2	BC050783|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr9_+_67688202_67688233	0.00610628	HIF1A.p2	AB281675|Vps13c|320528|vacuolar protein sorting 13C (yeast)	AB281676|Vps13c|320528|vacuolar protein sorting 13C (yeast)	AB281677|Vps13c|320528|vacuolar protein sorting 13C (yeast)	AB281678|Vps13c|320528|vacuolar protein sorting 13C (yeast)	NM_177184|Vps13c|320528|vacuolar protein sorting 13C (yeast)	AK045749|Vps13c|320528|vacuolar protein sorting 13C (yeast)	AK048766|Vps13c|320528|vacuolar protein sorting 13C (yeast)
mm9_v1_chr2_+_38367184_38367395	0.00609956	HIF1A.p2	AK029266|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AF218847|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	NM_021606|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK086700|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK011519|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK075836|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK018168|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK004925|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK075717|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK089919|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	BC019524|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK170757|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	NM_001159631|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr15_-_96472600_96472827	0.00582717	HIF1A.p2	AK040250|Slc38a1|105727|solute carrier family 38, member 1	AK029189|Slc38a1|105727|solute carrier family 38, member 1	BC066815|Slc38a1|105727|solute carrier family 38, member 1	BC030378|Slc38a1|105727|solute carrier family 38, member 1	AK049173|Slc38a1|105727|solute carrier family 38, member 1	AK050914|Slc38a1|105727|solute carrier family 38, member 1	AK082683|Slc38a1|105727|solute carrier family 38, member 1	NM_001166456|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr7_+_123587067_123587088	0.00580929	HIF1A.p2	
mm9_v1_chr14_+_122277821_122277919	0.0055099	HIF1A.p2	NM_026861|Ubac2|68889|ubiquitin associated domain containing 2	BC024467|Ubac2|68889|ubiquitin associated domain containing 2	AK049109|Ubac2|68889|ubiquitin associated domain containing 2	AK158177|Ubac2|68889|ubiquitin associated domain containing 2
mm9_v1_chr11_-_102178559_102178600	0.00537271	HIF1A.p2	AK158861|Ubtf|21429|upstream binding transcription factor, RNA polymerase I	NM_001044383|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr2_-_167515255_167515321	0.00527028	HIF1A.p2	AK080983|Tmem189|407243|transmembrane protein 189
mm9_v1_chr11_-_120442889_120442950	0.00524192	HIF1A.p2	AK170553|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK143516|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK165241|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK170718|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	NM_133796|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr5_-_100858497_100858536	0.00513523	HIF1A.p2	AK017316|5430416N02Rik|100041797|RIKEN cDNA 5430416N02 gene	AK034784|5430416N02Rik|100041797|RIKEN cDNA 5430416N02 gene
mm9_v1_chr3_-_95622554_95622875	0.00494621	HIF1A.p2	AK129150|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK154692|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	BC067054|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK083674|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK087157|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK012860|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK015972|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	NM_001081293|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2
mm9_v1_chr11_-_101645834_101645863	0.00492799	HIF1A.p2	DQ832277|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chr9_+_119250591_119250600	0.00461847	HIF1A.p2	BC012400|Acaa1a|113868|acetyl-Coenzyme A acyltransferase 1A
mm9_v1_chr6_+_50516641_50516724	0.00445026	HIF1A.p2	AK139045|5430402O13Rik|73183|RIKEN cDNA 5430402O13 gene	AK088092|5430402O13Rik|73183|RIKEN cDNA 5430402O13 gene
mm9_v1_chr2_+_18598882_18599030	0.00440422	HIF1A.p2	BC053708|Bmi1|12151|Bmi1 polycomb ring finger oncogene
mm9_v1_chr10_+_19868725_19868819	0.00437876	HIF1A.p2	NM_001198635|Mtap7|17761|microtubule-associated protein 7	NM_008635|Mtap7|17761|microtubule-associated protein 7	BC052637|Mtap7|17761|microtubule-associated protein 7	BC042771|Mtap7|17761|microtubule-associated protein 7	BC044733|Mtap7|17761|microtubule-associated protein 7	BC046555|Mtap7|17761|microtubule-associated protein 7	AK008182|Mtap7|17761|microtubule-associated protein 7	AK014575|Mtap7|17761|microtubule-associated protein 7	AB098611|Mtap7|17761|microtubule-associated protein 7	Y15197|Mtap7|17761|microtubule-associated protein 7
mm9_v1_chr6_-_142912908_142912971	0.00423269	HIF1A.p2	AK046188|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	BC024821|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	NM_011374|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
mm9_v1_chr2_+_162757834_162757850	0.00418891	HIF1A.p2	AK188277|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr3_-_97672119_97672138	0.00418847	HIF1A.p2	AK083867|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	AK051209|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr6_-_72548335_72548408	0.00412416	HIF1A.p2	AK049155|Elmod3|232089|ELMO/CED-12 domain containing 3	NM_144917|Elmod3|232089|ELMO/CED-12 domain containing 3	AK084010|Elmod3|232089|ELMO/CED-12 domain containing 3	AK164974|Elmod3|232089|ELMO/CED-12 domain containing 3
mm9_v1_chr5_+_32761560_32761602	0.00412326	HIF1A.p2	AK169379|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr10_+_119645800_119645892	0.00392411	HIF1A.p2	BC027637|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK039270|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK153442|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK162942|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK006207|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	NM_026617|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4
mm9_v1_chr4_+_126699209_126699282	0.00392102	HIF1A.p2	AF272847|Sfpq|71514|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm9_v1_chr5_-_68238654_68238670	0.00339363	HIF1A.p2	DQ503480|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AK151709|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503479|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_001038999|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_009727|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503477|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm9_v1_chr4_+_57580989_57581153	0.00320979	HIF1A.p2	AK045344|Palm2|242481|paralemmin 2	NM_172868|Palm2|242481|paralemmin 2	BC113156|Palm2|242481|paralemmin 2
mm9_v1_chr11_-_66339627_66339627	0.00288706	HIF1A.p2	AK147504|Shisa6|380702|shisa homolog 6 (Xenopus laevis)	NM_001034874|Shisa6|380702|shisa homolog 6 (Xenopus laevis)
mm9_v1_chr12_-_21379292_21379460	0.002737	HIF1A.p2	AJ007365|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC114999|Adam17|11491|a disintegrin and metallopeptidase domain 17	U69613|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC138416|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC138420|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC145270|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC026052|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK149288|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK139471|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC048792|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK137693|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK149614|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK165739|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC094655|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK144161|Adam17|11491|a disintegrin and metallopeptidase domain 17	U69614|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK142441|Adam17|11491|a disintegrin and metallopeptidase domain 17	NM_009615|Adam17|11491|a disintegrin and metallopeptidase domain 17	AB021709|Adam17|11491|a disintegrin and metallopeptidase domain 17
mm9_v1_chr3_+_27837540_27837616	0.00242698	HIF1A.p2	NM_001164056|Pld1|18805|phospholipase D1	U87868|Pld1|18805|phospholipase D1
mm9_v1_chr17_-_13185014_13185022	0.00213714	HIF1A.p2	AK156334|Wtap|60532|Wilms' tumour 1-associating protein
mm9_v1_chr8_+_128434349_128434353	0.00207792	HIF1A.p2	AK220424|BC021891|234878|cDNA sequence BC021891	NM_145608|BC021891|234878|cDNA sequence BC021891	BC021891|BC021891|234878|cDNA sequence BC021891
mm9_v1_chr2_-_168032561_168032640	0.00201685	HIF1A.p2	NM_009628|Adnp|11538|activity-dependent neuroprotective protein	AK129214|Adnp|11538|activity-dependent neuroprotective protein
mm9_v1_chr10_-_33927262_33927356	0.00192595	HIF1A.p2	AK045065|Dse|212898|dermatan sulfate epimerase	BC053095|Dse|212898|dermatan sulfate epimerase	NM_172508|Dse|212898|dermatan sulfate epimerase
mm9_v1_chr1_-_158869401_158869517	0.00138296	HIF1A.p2	AK019543|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159966|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr3_+_62142923_62142923	0.00123717	HIF1A.p2	AK087060|Arhgef26|622434|Rho guanine nucleotide exchange factor (GEF) 26
mm9_v1_chr11_-_6100141_6100160	0.000258701	HIF1A.p2	BC037090|Nudcd3|209586|NudC domain containing 3	AK050476|Nudcd3|209586|NudC domain containing 3	EU350933|Nudcd3|209586|NudC domain containing 3	AK036694|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr15_-_89185832_89185990	0.000185381	HIF1A.p2	AK184485|Lmf2|105847|lipase maturation factor 2	AK185616|Lmf2|105847|lipase maturation factor 2	AK084606|Lmf2|105847|lipase maturation factor 2	BC026448|Lmf2|105847|lipase maturation factor 2	BC079532|Lmf2|105847|lipase maturation factor 2
mm9_v1_chr16_-_24393527_24393719	0.000184761	HIF1A.p2	AK004252|1110054M08Rik|68841|RIKEN cDNA 1110054M08 gene	AK039760|1110054M08Rik|68841|RIKEN cDNA 1110054M08 gene
mm9_v1_chr11_-_69734709_69734796	0.000181856	HIF1A.p2	AK178863|Eif5a|276770|eukaryotic translation initiation factor 5A	AK188886|Eif5a|276770|eukaryotic translation initiation factor 5A	BC008093|Eif5a|276770|eukaryotic translation initiation factor 5A	BC003889|Eif5a|276770|eukaryotic translation initiation factor 5A	BC024899|Eif5a|276770|eukaryotic translation initiation factor 5A	AK011470|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166595|Eif5a|276770|eukaryotic translation initiation factor 5A	AK010183|Eif5a|276770|eukaryotic translation initiation factor 5A
