mm9_v1_chr2_+_158201373_158201515	1.18224	CUCCCAA	NM_175692|Snhg11|319317|small nucleolar RNA host gene 11	AK157790|Snhg11|319317|small nucleolar RNA host gene 11	AK080745|Snhg11|319317|small nucleolar RNA host gene 11	AK133939|Snhg11|319317|small nucleolar RNA host gene 11	AK138473|Snhg11|319317|small nucleolar RNA host gene 11	BC049241|Snhg11|319317|small nucleolar RNA host gene 11	BC030414|Snhg11|319317|small nucleolar RNA host gene 11
mm9_v1_chr2_+_179177132_179177182	0.883055	CUCCCAA	BC047991|Cdh4|12561|cadherin 4	NM_009867|Cdh4|12561|cadherin 4
mm9_v1_chr2_+_25733302_25733389	0.750842	CUCCCAA	BC141190|Kcnt1|227632|potassium channel, subfamily T, member 1	BC171963|Kcnt1|227632|potassium channel, subfamily T, member 1	AK086119|Kcnt1|227632|potassium channel, subfamily T, member 1	NM_175462|Kcnt1|227632|potassium channel, subfamily T, member 1	AK147625|Kcnt1|227632|potassium channel, subfamily T, member 1
mm9_v1_chr2_+_157385835_157385932	0.651922	CUCCCAA	AK003004|Nnat|18111|neuronatin	AK077465|Nnat|18111|neuronatin	AK160626|Nnat|18111|neuronatin	NM_010923|Nnat|18111|neuronatin	NM_180960|Nnat|18111|neuronatin	X83569|Nnat|18111|neuronatin	X83570|Nnat|18111|neuronatin	BC036984|Nnat|18111|neuronatin	AB004048|Nnat|18111|neuronatin	X83568|Nnat|18111|neuronatin
mm9_v1_chr11_-_108205199_108205207	0.585086	CUCCCAA	AK147084|Prkca|18750|protein kinase C, alpha	NM_011101|Prkca|18750|protein kinase C, alpha
mm9_v1_chr7_+_152082435_152082493	0.581053	CUCCCAA	AK017829|Fgf15|14170|fibroblast growth factor 15	AF007268|Fgf15|14170|fibroblast growth factor 15	NM_008003|Fgf15|14170|fibroblast growth factor 15	BC021328|Fgf15|14170|fibroblast growth factor 15
mm9_v1_chr1_+_81073778_81073898	0.568392	CUCCCAA	AK034747|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene	BC082310|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene	NM_172849|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene	AK137094|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene
mm9_v1_chr2_+_163264188_163264268	0.556607	CUCCCAA	NM_144891|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK164991|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK140488|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	AK141371|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1	BC019941|Gdap1l1|228858|ganglioside-induced differentiation-associated protein 1-like 1
mm9_v1_chr14_+_84843366_84843370	0.531047	CUCCCAA	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr8_+_12915892_12915957	0.524655	CUCCCAA	NM_178076|Mcf2l|17207|mcf.2 transforming sequence-like	AK082849|Mcf2l|17207|mcf.2 transforming sequence-like	AK048898|Mcf2l|17207|mcf.2 transforming sequence-like	BC058622|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr9_+_107838164_107838328	0.515267	CUCCCAA	AK085143|Camkv|235604|CaM kinase-like vesicle-associated	NM_145621|Camkv|235604|CaM kinase-like vesicle-associated	BC017634|Camkv|235604|CaM kinase-like vesicle-associated	BC111033|Camkv|235604|CaM kinase-like vesicle-associated	AK147323|Camkv|235604|CaM kinase-like vesicle-associated	BC022169|Camkv|235604|CaM kinase-like vesicle-associated	BC086762|Camkv|235604|CaM kinase-like vesicle-associated
mm9_v1_chr11_-_102308966_102308985	0.501587	CUCCCAA	NM_199200|Fam171a2|217219|family with sequence similarity 171, member A2
mm9_v1_chr5_-_139801315_139801476	0.492157	CUCCCAA	NM_172723|Adap1|231821|ArfGAP with dual PH domains 1
mm9_v1_chr12_+_75098739_75098790	0.465256	CUCCCAA	AK137129|Syt16|238266|synaptotagmin XVI	AK032606|Syt16|238266|synaptotagmin XVI	NM_172804|Syt16|238266|synaptotagmin XVI
mm9_v1_chr11_+_104092749_104092776	0.463241	CUCCCAA	M18775|Mapt|17762|microtubule-associated protein tau	M18776|Mapt|17762|microtubule-associated protein tau	NM_001038609|Mapt|17762|microtubule-associated protein tau	NM_010838|Mapt|17762|microtubule-associated protein tau	AK078167|Mapt|17762|microtubule-associated protein tau
mm9_v1_chr6_-_90378423_90378473	0.458952	CUCCCAA	BC047211|Ccdc37|243538|coiled-coil domain containing 37	AK021139|Ccdc37|243538|coiled-coil domain containing 37	NM_173775|Ccdc37|243538|coiled-coil domain containing 37
mm9_v1_chr12_+_52694307_52694441	0.45301	CUCCCAA	AK137336|Coch|12810|coagulation factor C homolog (Limulus polyphemus)	NM_001198835|Coch|12810|coagulation factor C homolog (Limulus polyphemus)	NM_007728|Coch|12810|coagulation factor C homolog (Limulus polyphemus)	AF006741|Coch|12810|coagulation factor C homolog (Limulus polyphemus)	AK171875|Coch|12810|coagulation factor C homolog (Limulus polyphemus)	AK156430|Coch|12810|coagulation factor C homolog (Limulus polyphemus)	BC045137|Coch|12810|coagulation factor C homolog (Limulus polyphemus)	AK028690|Coch|12810|coagulation factor C homolog (Limulus polyphemus)
mm9_v1_chr17_-_56279684_56279770	0.451322	CUCCCAA	AK139358|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	AK143229|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	NM_001130456|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
mm9_v1_chr12_+_12268901_12269011	0.436251	CUCCCAA	NM_001146119|Fam49a|76820|family with sequence similarity 49, member A	NM_029758|Fam49a|76820|family with sequence similarity 49, member A	AK047142|Fam49a|76820|family with sequence similarity 49, member A	BC049664|Fam49a|76820|family with sequence similarity 49, member A
mm9_v1_chr15_-_74583382_74583477	0.431788	CUCCCAA	AF141377|Lynx1|23936|Ly6/neurotoxin 1	AK013827|Lynx1|23936|Ly6/neurotoxin 1	NM_011838|Lynx1|23936|Ly6/neurotoxin 1	AK165295|Lynx1|23936|Ly6/neurotoxin 1	AK165314|Lynx1|23936|Ly6/neurotoxin 1	AK162920|Lynx1|23936|Ly6/neurotoxin 1	AK161907|Lynx1|23936|Ly6/neurotoxin 1
mm9_v1_chr11_+_6963421_6963491	0.427527	CUCCCAA	NM_009622|Adcy1|432530|adenylate cyclase 1
mm9_v1_chr5_-_108978950_108979047	0.42594	CUCCCAA	BC014803|Cplx1|12889|complexin 1	D38614|Cplx1|12889|complexin 1	AK158166|Cplx1|12889|complexin 1	AK134820|Cplx1|12889|complexin 1	AK159026|Cplx1|12889|complexin 1	NM_007756|Cplx1|12889|complexin 1
mm9_v1_chrX_+_130939318_130939458	0.415721	CUCCCAA	AK038488|Drp2|13497|dystrophin related protein 2	NM_010078|Drp2|13497|dystrophin related protein 2	AK081426|Drp2|13497|dystrophin related protein 2	AK034383|Drp2|13497|dystrophin related protein 2	BC125345|Drp2|13497|dystrophin related protein 2	BC125347|Drp2|13497|dystrophin related protein 2
mm9_v1_chr9_-_117161564_117161606	0.41182	CUCCCAA	BC108402|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK052196|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK032938|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK081921|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK051776|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK041098|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172122|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172123|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172124|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172126|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_178660|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr2_+_31101302_31101442	0.373331	CUCCCAA	BC059825|Ncs1|14299|neuronal calcium sensor 1	NM_019681|Ncs1|14299|neuronal calcium sensor 1
mm9_v1_chr10_+_101621491_101621538	0.359028	CUCCCAA	NM_001162368|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK015051|4930402I19Rik|73798|RIKEN cDNA 4930402I19 gene
mm9_v1_chr11_-_98190774_98191090	0.358107	CUCCCAA	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr8_+_73993084_73993151	0.35069	CUCCCAA	NM_025600|Dda1|66498|DET1 and DDB1 associated 1	AK160132|Dda1|66498|DET1 and DDB1 associated 1	AK006318|Dda1|66498|DET1 and DDB1 associated 1	AK149980|Dda1|66498|DET1 and DDB1 associated 1	AK149117|Dda1|66498|DET1 and DDB1 associated 1	BC034701|Dda1|66498|DET1 and DDB1 associated 1	AK168085|Dda1|66498|DET1 and DDB1 associated 1	AK032966|Dda1|66498|DET1 and DDB1 associated 1	BC093523|Dda1|66498|DET1 and DDB1 associated 1
mm9_v1_chr1_+_160292470_160292548	0.349628	CUCCCAA	AK164117|Astn1|11899|astrotactin 1	NM_007495|Astn1|11899|astrotactin 1	BC094666|Astn1|11899|astrotactin 1
mm9_v1_chr1_+_7079000_7079035	0.343538	CUCCCAA	NM_183028|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr17_-_43803963_43804162	0.34288	CUCCCAA	AK014394|Slc25a27|74011|solute carrier family 25, member 27	NM_028711|Slc25a27|74011|solute carrier family 25, member 27	BC138993|Slc25a27|74011|solute carrier family 25, member 27	BC138994|Slc25a27|74011|solute carrier family 25, member 27	AB106930|Slc25a27|74011|solute carrier family 25, member 27	AK021314|Slc25a27|74011|solute carrier family 25, member 27	AK043831|Slc25a27|74011|solute carrier family 25, member 27
mm9_v1_chr7_-_81158546_81158567	0.342734	CUCCCAA	X83562|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	BC096546|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	NM_009181|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
mm9_v1_chr4_+_42930076_42930171	0.33965	CUCCCAA	BC057092|N28178|230085|expressed sequence N28178	NM_172690|N28178|230085|expressed sequence N28178	AK046283|N28178|230085|expressed sequence N28178	AK038528|N28178|230085|expressed sequence N28178
mm9_v1_chr4_-_141155782_141155838	0.338071	CUCCCAA	X66903|Fblim1|74202|filamin binding LIM protein 1	NM_001163256|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr16_+_8513513_8513607	0.319708	CUCCCAA	NM_001170978|Abat|268860|4-aminobutyrate aminotransferase	NM_172961|Abat|268860|4-aminobutyrate aminotransferase	AK132282|Abat|268860|4-aminobutyrate aminotransferase	AK165348|Abat|268860|4-aminobutyrate aminotransferase	AK160802|Abat|268860|4-aminobutyrate aminotransferase	AK083062|Abat|268860|4-aminobutyrate aminotransferase	AK036128|Abat|268860|4-aminobutyrate aminotransferase	BC058079|Abat|268860|4-aminobutyrate aminotransferase	BC058521|Abat|268860|4-aminobutyrate aminotransferase
mm9_v1_chr3_-_89126782_89126889	0.318198	CUCCCAA	BC107002|Efna3|13638|ephrin A3	BC125003|Efna3|13638|ephrin A3	NM_010108|Efna3|13638|ephrin A3
mm9_v1_chr3_+_55046447_55046542	0.31225	CUCCCAA	AK147831|Dclk1|13175|doublecortin-like kinase 1	NM_001111053|Dclk1|13175|doublecortin-like kinase 1	NM_001195538|Dclk1|13175|doublecortin-like kinase 1	NM_019978|Dclk1|13175|doublecortin-like kinase 1	AB093234|Dclk1|13175|doublecortin-like kinase 1	AK164993|Dclk1|13175|doublecortin-like kinase 1	AF155820|Dclk1|13175|doublecortin-like kinase 1	BC064783|Dclk1|13175|doublecortin-like kinase 1	BC021354|Dclk1|13175|doublecortin-like kinase 1	AK043874|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr2_+_155102040_155102281	0.30864	CUCCCAA	AK015020|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	NM_025735|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	AK003122|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	AK003716|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	BC010596|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha
mm9_v1_chr3_+_89324085_89324085	0.307403	CUCCCAA	AK137738|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK170218|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_080466|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm9_v1_chr8_+_87560809_87560830	0.303936	CUCCCAA	AK154985|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	AK155760|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	NM_145390|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr5_-_36873134_36873271	0.302078	CUCCCAA	AB064521|Tbc1d14|100855|TBC1 domain family, member 14	BC011420|Tbc1d14|100855|TBC1 domain family, member 14	AK013092|Tbc1d14|100855|TBC1 domain family, member 14	NM_001113364|Tbc1d14|100855|TBC1 domain family, member 14
mm9_v1_chr8_+_114060341_114060576	0.301713	CUCCCAA	AK079338|Znrf1|170737|zinc and ring finger 1	NM_001168621|Znrf1|170737|zinc and ring finger 1	NM_001168622|Znrf1|170737|zinc and ring finger 1	NM_133206|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr2_+_70312979_70313222	0.297124	CUCCCAA	AK036234|Sp5|64406|trans-acting transcription factor 5	NM_022435|Sp5|64406|trans-acting transcription factor 5	BC116691|Sp5|64406|trans-acting transcription factor 5	BC117505|Sp5|64406|trans-acting transcription factor 5	AF279479|Sp5|64406|trans-acting transcription factor 5
mm9_v1_chr16_+_91547266_91547421	0.295449	CUCCCAA	AK137165|Ifngr2|15980|interferon gamma receptor 2	AK169907|Ifngr2|15980|interferon gamma receptor 2	AK165193|Ifngr2|15980|interferon gamma receptor 2	AK143214|Ifngr2|15980|interferon gamma receptor 2	AK086929|Ifngr2|15980|interferon gamma receptor 2	AK146995|Ifngr2|15980|interferon gamma receptor 2	S69336|Ifngr2|15980|interferon gamma receptor 2	AK087158|Ifngr2|15980|interferon gamma receptor 2	BC055745|Ifngr2|15980|interferon gamma receptor 2	NM_008338|Ifngr2|15980|interferon gamma receptor 2
mm9_v1_chr2_-_148558110_148558202	0.295389	CUCCCAA	AK078224|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta	BC038362|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta	AK083184|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta	NM_019632|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta	BC049874|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta
mm9_v1_chr5_+_24191614_24191659	0.290824	CUCCCAA	AK086301|Nub1|53312|negative regulator of ubiquitin-like proteins 1	NM_016736|Nub1|53312|negative regulator of ubiquitin-like proteins 1
mm9_v1_chr10_-_77365164_77365282	0.289254	CUCCCAA	AY061858|Lrrc3|237387|leucine rich repeat containing 3	AK043535|Lrrc3|237387|leucine rich repeat containing 3	NM_145152|Lrrc3|237387|leucine rich repeat containing 3
mm9_v1_chr10_-_79076744_79076769	0.282911	CUCCCAA	BC089008|C2cd4c|237397|C2 calcium-dependent domain containing 4C	NM_198614|C2cd4c|237397|C2 calcium-dependent domain containing 4C	AK029946|C2cd4c|237397|C2 calcium-dependent domain containing 4C	NM_001168624|C2cd4c|237397|C2 calcium-dependent domain containing 4C
mm9_v1_chr17_+_78599556_78599594	0.281719	CUCCCAA	NM_015800|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr7_+_53651811_53651938	0.280363	CUCCCAA	NM_008421|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147476|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147682|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	NM_001112739|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr4_+_151712739_151712761	0.280035	CUCCCAA	NM_001081376|Chd5|269610|chromodomain helicase DNA binding protein 5	NM_029216|Chd5|269610|chromodomain helicase DNA binding protein 5	AK147563|Chd5|269610|chromodomain helicase DNA binding protein 5
mm9_v1_chr1_-_134638361_134638397	0.277075	CUCCCAA	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr3_-_122322556_122322614	0.275685	CUCCCAA	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr1_-_84281164_84281254	0.274573	CUCCCAA	BC080290|Pid1|98496|phosphotyrosine interaction domain containing 1	AK164328|Pid1|98496|phosphotyrosine interaction domain containing 1	AK151267|Pid1|98496|phosphotyrosine interaction domain containing 1	AK163691|Pid1|98496|phosphotyrosine interaction domain containing 1	NM_001003948|Pid1|98496|phosphotyrosine interaction domain containing 1
mm9_v1_chr6_+_17015148_17015148	0.27414	CUCCCAA	NM_207176|Tes|21753|testis derived transcript
mm9_v1_chr15_+_32174546_32174624	0.267405	CUCCCAA	AK143026|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK045236|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	NM_009154|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK031231|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK054256|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK165206|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK039101|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK157706|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK141612|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
mm9_v1_chr4_-_86876328_86876443	0.263772	CUCCCAA	AK038800|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK136058|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_172426|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr7_-_116895708_116895795	0.2631	CUCCCAA	AK009147|Tmem9b|56786|TMEM9 domain family, member B	AK077253|Tmem9b|56786|TMEM9 domain family, member B	AK007430|Tmem9b|56786|TMEM9 domain family, member B	BC002208|Tmem9b|56786|TMEM9 domain family, member B	NM_020050|Tmem9b|56786|TMEM9 domain family, member B	AK147127|Tmem9b|56786|TMEM9 domain family, member B
mm9_v1_chr2_+_69660426_69660529	0.25458	CUCCCAA	BC072626|Klhl23|277396|kelch-like 23 (Drosophila)	NM_177784|Klhl23|277396|kelch-like 23 (Drosophila)	AK048518|Klhl23|277396|kelch-like 23 (Drosophila)
mm9_v1_chr11_-_118947424_118947559	0.254107	CUCCCAA	BC117801|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	BC117802|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	U63387|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	BC045162|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	BC018304|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	NM_007625|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)
mm9_v1_chr5_+_30559138_30559249	0.253092	CUCCCAA	NM_027652|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK040494|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK079325|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK083973|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK140416|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC106097|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK048011|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK014530|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC115783|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC117551|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK122544|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK040745|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm9_v1_chr6_-_85019497_85019518	0.251225	CUCCCAA	AK144547|Exoc6b|75914|exocyst complex component 6B	NM_177077|Exoc6b|75914|exocyst complex component 6B
mm9_v1_chr7_+_4088622_4088685	0.250351	CUCCCAA	AK170629|Leng8|232798|leukocyte receptor cluster (LRC) member 8	AK034310|Leng8|232798|leukocyte receptor cluster (LRC) member 8	NM_172736|Leng8|232798|leukocyte receptor cluster (LRC) member 8	AK085304|Leng8|232798|leukocyte receptor cluster (LRC) member 8	AK158293|Leng8|232798|leukocyte receptor cluster (LRC) member 8	BC066768|Leng8|232798|leukocyte receptor cluster (LRC) member 8	BC042658|Leng8|232798|leukocyte receptor cluster (LRC) member 8	BC041775|Leng8|232798|leukocyte receptor cluster (LRC) member 8
mm9_v1_chr8_+_4493404_4493448	0.248998	CUCCCAA	NM_026058|Lass4|67260|LAG1 homolog, ceramide synthase 4	AK134887|Lass4|67260|LAG1 homolog, ceramide synthase 4
mm9_v1_chr11_-_28484265_28484323	0.248561	CUCCCAA	AK087049|Ccdc85a|216613|coiled-coil domain containing 85A	AK087070|Ccdc85a|216613|coiled-coil domain containing 85A	AK045568|Ccdc85a|216613|coiled-coil domain containing 85A	NM_001166661|Ccdc85a|216613|coiled-coil domain containing 85A	NM_001166662|Ccdc85a|216613|coiled-coil domain containing 85A	NM_181577|Ccdc85a|216613|coiled-coil domain containing 85A	AK173298|Ccdc85a|216613|coiled-coil domain containing 85A
mm9_v1_chr8_-_122099088_122099101	0.246357	CUCCCAA	NM_175185|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
mm9_v1_chr5_-_138705172_138705284	0.245609	CUCCCAA	AK138960|BC037034|231807|cDNA sequence BC037034	AK046882|BC037034|231807|cDNA sequence BC037034	NM_153161|BC037034|231807|cDNA sequence BC037034
mm9_v1_chr4_-_134989653_134989790	0.244087	CUCCCAA	AK042201|Rcan3|53902|regulator of calcineurin 3	AK155270|Rcan3|53902|regulator of calcineurin 3	NM_022980|Rcan3|53902|regulator of calcineurin 3	AK043916|Rcan3|53902|regulator of calcineurin 3
mm9_v1_chr19_-_58935470_58935484	0.242519	CUCCCAA	AY196789|Hspa12a|73442|heat shock protein 12A	AK141925|Hspa12a|73442|heat shock protein 12A	NM_175199|Hspa12a|73442|heat shock protein 12A
mm9_v1_chr16_-_52453104_52453136	0.241788	CUCCCAA	AK053201|Alcam|11658|activated leukocyte cell adhesion molecule	AK030851|Alcam|11658|activated leukocyte cell adhesion molecule	NM_009655|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chr5_+_31014229_31014273	0.241399	CUCCCAA	AK044866|Dpysl5|65254|dihydropyrimidinase-like 5	BC065054|Dpysl5|65254|dihydropyrimidinase-like 5	NM_023047|Dpysl5|65254|dihydropyrimidinase-like 5	BC103789|Dpysl5|65254|dihydropyrimidinase-like 5
mm9_v1_chr2_+_127073631_127073743	0.241377	CUCCCAA	AK165880|Tmem127|69470|transmembrane protein 127	AK030324|Tmem127|69470|transmembrane protein 127	BC049832|Tmem127|69470|transmembrane protein 127	NM_175145|Tmem127|69470|transmembrane protein 127	AK050216|Tmem127|69470|transmembrane protein 127
mm9_v1_chr6_-_124414668_124414803	0.240739	CUCCCAA	AJ278486|Clstn3|232370|calsyntenin 3	BC055054|Clstn3|232370|calsyntenin 3	AK032336|Clstn3|232370|calsyntenin 3	NM_153508|Clstn3|232370|calsyntenin 3
mm9_v1_chr6_+_61130318_61130318	0.232218	CUCCCAA	NM_001164316|Fam190a|232035|family with sequence similarity 190, member A	NM_183310|Fam190a|232035|family with sequence similarity 190, member A
mm9_v1_chr2_+_179777187_179777250	0.229685	CUCCCAA	NM_178750|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	BC054730|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK133944|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr2_+_49921978_49921983	0.229676	CUCCCAA	NM_177139|Lypd6|320343|LY6/PLAUR domain containing 6	AK053620|Lypd6|320343|LY6/PLAUR domain containing 6
mm9_v1_chr9_+_44925922_44925963	0.229099	CUCCCAA	NM_001014761|Scn2b|72821|sodium channel, voltage-gated, type II, beta	AB118947|Scn2b|72821|sodium channel, voltage-gated, type II, beta	BC092225|Scn2b|72821|sodium channel, voltage-gated, type II, beta
mm9_v1_chrX_-_7709907_7709983	0.228575	CUCCCAA	BC080853|Wdr13|73447|WD repeat domain 13	BC057366|Wdr13|73447|WD repeat domain 13	NM_026137|Wdr13|73447|WD repeat domain 13
mm9_v1_chr5_-_118694869_118695124	0.228559	CUCCCAA	AK046850|Rnft2|269695|ring finger protein, transmembrane 2	NM_172998|Rnft2|269695|ring finger protein, transmembrane 2	BC057302|Rnft2|269695|ring finger protein, transmembrane 2	AK148930|Rnft2|269695|ring finger protein, transmembrane 2	NM_001109902|Rnft2|269695|ring finger protein, transmembrane 2	AK090256|Rnft2|269695|ring finger protein, transmembrane 2
mm9_v1_chr13_-_100286521_100286556	0.22532	CUCCCAA	NM_008634|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr9_+_58100961_58101075	0.221751	CUCCCAA	NM_026942|Stoml1|69106|stomatin-like 1	AK045820|Stoml1|69106|stomatin-like 1	BC017536|Stoml1|69106|stomatin-like 1	BC037074|Stoml1|69106|stomatin-like 1	AK148324|Stoml1|69106|stomatin-like 1
mm9_v1_chr14_-_122138082_122138150	0.21891	CUCCCAA	BC158050|Dock9|105445|dedicator of cytokinesis 9	AK122431|Dock9|105445|dedicator of cytokinesis 9	NM_001128307|Dock9|105445|dedicator of cytokinesis 9	NM_001128308|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chrX_+_130829763_130829919	0.218149	CUCCCAA	BC042623|Tmem35|67564|transmembrane protein 35	NM_026239|Tmem35|67564|transmembrane protein 35	BC050880|Tmem35|67564|transmembrane protein 35
mm9_v1_chr2_+_106535757_106535757	0.215247	CUCCCAA	AK012553|Mpped2|77015|metallophosphoesterase domain containing 2	NM_029837|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr1_-_160286359_160286472	0.213962	CUCCCAA	BC067038|Fam5b|240843|family with sequence similarity 5, member B	BC076572|Fam5b|240843|family with sequence similarity 5, member B	NM_207583|Fam5b|240843|family with sequence similarity 5, member B	AK032297|Fam5b|240843|family with sequence similarity 5, member B	AK047824|Fam5b|240843|family with sequence similarity 5, member B	AK122549|Fam5b|240843|family with sequence similarity 5, member B
mm9_v1_chr6_-_126690651_126690691	0.213133	CUCCCAA	NM_013568|Kcna6|16494|potassium voltage-gated channel, shaker-related, subfamily, member 6
mm9_v1_chr4_-_107973683_107973743	0.211218	CUCCCAA	AK166278|Zyg11b|414872|zyg-ll homolog B (C. elegans)	AK148335|Zyg11b|414872|zyg-ll homolog B (C. elegans)	NM_001033634|Zyg11b|414872|zyg-ll homolog B (C. elegans)
mm9_v1_chr4_-_57003214_57003289	0.211022	CUCCCAA	NM_001142965|6430704M03Rik|230235|RIKEN cDNA 6430704M03 gene	BC132345|6430704M03Rik|230235|RIKEN cDNA 6430704M03 gene
mm9_v1_chr16_+_18248964_18249010	0.208429	CUCCCAA	AK017819|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK134368|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001080999|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001081000|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001195205|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
mm9_v1_chr16_-_20621287_20621552	0.207597	CUCCCAA	AK013788|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147550|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147736|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147745|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC157896|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	NM_028420|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2
mm9_v1_chrX_-_140367467_140367853	0.205892	CUCCCAA	AY560329|Dcx|13193|doublecortin	AK048410|Dcx|13193|doublecortin	AF045547|Dcx|13193|doublecortin	AK164119|Dcx|13193|doublecortin	BC056391|Dcx|13193|doublecortin	AK049050|Dcx|13193|doublecortin	NM_001110222|Dcx|13193|doublecortin	BC057010|Dcx|13193|doublecortin	BC062974|Dcx|13193|doublecortin	AK014264|Dcx|13193|doublecortin	NM_001110223|Dcx|13193|doublecortin	NM_001110224|Dcx|13193|doublecortin	NM_010025|Dcx|13193|doublecortin	AB011678|Dcx|13193|doublecortin
mm9_v1_chr17_-_32946797_32946863	0.205317	CUCCCAA	BC052046|Zfp811|240063|zinc finger protein 811	NM_183177|Zfp811|240063|zinc finger protein 811
mm9_v1_chr9_-_56265833_56265857	0.204565	CUCCCAA	AK035440|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene	AK048912|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene	NM_172924|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene
mm9_v1_chrX_-_34529439_34529513	0.202963	CUCCCAA	AB023622|Sept6|56526|septin 6	AK088614|Sept6|56526|septin 6	AK088406|Sept6|56526|septin 6	AK172894|Sept6|56526|septin 6	BC010489|Sept6|56526|septin 6	AK012858|Sept6|56526|septin 6	AK160884|Sept6|56526|septin 6	AK083302|Sept6|56526|septin 6	AK162755|Sept6|56526|septin 6	AK048455|Sept6|56526|septin 6	NM_001177323|Sept6|56526|septin 6
mm9_v1_chr11_-_119908236_119908480	0.201764	CUCCCAA	AY236858|Aatk|11302|apoptosis-associated tyrosine kinase	AY236859|Aatk|11302|apoptosis-associated tyrosine kinase	AB288871|Aatk|11302|apoptosis-associated tyrosine kinase	AB093253|Aatk|11302|apoptosis-associated tyrosine kinase	NM_001198785|Aatk|11302|apoptosis-associated tyrosine kinase	NM_007377|Aatk|11302|apoptosis-associated tyrosine kinase	BC042837|Aatk|11302|apoptosis-associated tyrosine kinase	BC052323|Aatk|11302|apoptosis-associated tyrosine kinase
mm9_v1_chrX_-_13423666_13423727	0.201579	CUCCCAA	NM_009806|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17137|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17138|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm9_v1_chr9_+_121669121_121669172	0.199622	CUCCCAA	NM_001166644|Zfp651|270210|zinc finger protein 651
mm9_v1_chr13_+_55794441_55794492	0.197897	CUCCCAA	AK088693|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	BC051430|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	NM_181278|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr6_+_45010040_45010086	0.19551	CUCCCAA	NM_001004357|Cntnap2|66797|contactin associated protein-like 2	AK129232|Cntnap2|66797|contactin associated protein-like 2
mm9_v1_chr10_+_122115755_122115904	0.191268	CUCCCAA	AK043121|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	NM_001110218|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	NM_176919|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK040207|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK077422|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK134804|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK051434|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK220260|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)
mm9_v1_chr7_-_134164627_134164726	0.190981	CUCCCAA	NM_001102563|Prrt2|69017|proline-rich transmembrane protein 2
mm9_v1_chr2_+_128891655_128891754	0.18832	CUCCCAA	NM_027192|Ttl|69737|tubulin tyrosine ligase	BC024414|Ttl|69737|tubulin tyrosine ligase	AK084377|Ttl|69737|tubulin tyrosine ligase
mm9_v1_chr8_-_89409079_89409204	0.184058	CUCCCAA	AK134934|N4bp1|80750|NEDD4 binding protein 1	AK172981|N4bp1|80750|NEDD4 binding protein 1	AK147522|N4bp1|80750|NEDD4 binding protein 1	NM_030563|N4bp1|80750|NEDD4 binding protein 1
mm9_v1_chr6_+_86799460_86799754	0.179943	CUCCCAA	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr6_+_83745142_83745245	0.17774	CUCCCAA	NM_001164187|Nagk|56174|N-acetylglucosamine kinase	AK155292|Nagk|56174|N-acetylglucosamine kinase	BC004689|Nagk|56174|N-acetylglucosamine kinase	AJ242911|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chr15_+_82105322_82105458	0.17394	CUCCCAA	AF104411|Sept3|24050|septin 3	NM_011889|Sept3|24050|septin 3	BC055738|Sept3|24050|septin 3
mm9_v1_chrX_+_70656434_70656441	0.173151	CUCCCAA	U47104|Zfp92|22754|zinc finger protein 92	AK141522|Zfp92|22754|zinc finger protein 92	NM_009566|Zfp92|22754|zinc finger protein 92
mm9_v1_chr15_-_36426543_36426556	0.171809	CUCCCAA	BC035553|Ankrd46|68839|ankyrin repeat domain 46	NM_175134|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr7_+_109371529_109371618	0.169965	CUCCCAA	AK159933|Pgap2|233575|post-GPI attachment to proteins 2	AK159950|Pgap2|233575|post-GPI attachment to proteins 2	AK136764|Pgap2|233575|post-GPI attachment to proteins 2	AK146442|Pgap2|233575|post-GPI attachment to proteins 2	BC004794|Pgap2|233575|post-GPI attachment to proteins 2	NM_145583|Pgap2|233575|post-GPI attachment to proteins 2	AK152931|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr16_-_16359122_16359124	0.169194	CUCCCAA	NM_001025947|Dnm1l|74006|dynamin 1-like	NM_152816|Dnm1l|74006|dynamin 1-like
mm9_v1_chr11_+_79404713_79404722	0.168243	CUCCCAA	AK046734|Rab11fip4|268451|RAB11 family interacting protein 4 (class II)	NM_175543|Rab11fip4|268451|RAB11 family interacting protein 4 (class II)
mm9_v1_chr7_+_98239230_98239295	0.166648	CUCCCAA	NM_011807|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr4_+_122860705_122860828	0.165217	CUCCCAA	AK032591|Hpcal4|170638|hippocalcin-like 4	NM_174998|Hpcal4|170638|hippocalcin-like 4
mm9_v1_chr11_+_119804400_119804447	0.164925	CUCCCAA	AK049469|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	AK145924|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	AK160401|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	NM_001037754|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	NM_001037755|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	NM_130862|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	AK170190|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	BC006620|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	BC016411|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	AF390178|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2	AF390179|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2
mm9_v1_chr5_-_36925021_36925045	0.163892	CUCCCAA	BC042515|Tbc1d14|100855|TBC1 domain family, member 14	NM_133910|Tbc1d14|100855|TBC1 domain family, member 14
mm9_v1_chr7_-_130643962_130644139	0.162197	CUCCCAA	AK034954|Zkscan2|210162|zinc finger with KRAB and SCAN domains 2	NM_001081329|Zkscan2|210162|zinc finger with KRAB and SCAN domains 2	AK080486|Zkscan2|210162|zinc finger with KRAB and SCAN domains 2
mm9_v1_chr2_+_25258568_25258631	0.161863	CUCCCAA	BC003320|Npdc1|18146|neural proliferation, differentiation and control gene 1	NM_008721|Npdc1|18146|neural proliferation, differentiation and control gene 1
mm9_v1_chr17_+_29405732_29405781	0.161811	CUCCCAA	NM_030561|BC004004|80748|cDNA sequence BC004004
mm9_v1_chr8_+_87514471_87514552	0.160979	CUCCCAA	NM_001167991|Hook2|170833|hook homolog 2 (Drosophila)	NM_133255|Hook2|170833|hook homolog 2 (Drosophila)	AK030599|Hook2|170833|hook homolog 2 (Drosophila)	AK136069|Hook2|170833|hook homolog 2 (Drosophila)	AK042048|Hook2|170833|hook homolog 2 (Drosophila)	AK166954|Hook2|170833|hook homolog 2 (Drosophila)	BC080744|Hook2|170833|hook homolog 2 (Drosophila)	BC019486|Hook2|170833|hook homolog 2 (Drosophila)	AK145768|Hook2|170833|hook homolog 2 (Drosophila)	AK169073|Hook2|170833|hook homolog 2 (Drosophila)	AK161612|Hook2|170833|hook homolog 2 (Drosophila)	BC055881|Hook2|170833|hook homolog 2 (Drosophila)	BC029967|Hook2|170833|hook homolog 2 (Drosophila)
mm9_v1_chr1_-_156573049_156573160	0.158809	CUCCCAA	NM_009782|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit	BC150750|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm9_v1_chr15_-_81021165_81021194	0.157605	CUCCCAA	AK044188|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1	AK155821|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1	NM_001082536|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm9_v1_chr8_-_97400173_97400261	0.156963	CUCCCAA	BC004705|Dok4|114255|docking protein 4	AK032352|Dok4|114255|docking protein 4	AK077612|Dok4|114255|docking protein 4	AK156485|Dok4|114255|docking protein 4	NM_053246|Dok4|114255|docking protein 4
mm9_v1_chr9_-_110379093_110379197	0.156733	CUCCCAA	BC065167|Klhl18|270201|kelch-like 18 (Drosophila)	BC025563|Klhl18|270201|kelch-like 18 (Drosophila)	AK173029|Klhl18|270201|kelch-like 18 (Drosophila)	NM_177771|Klhl18|270201|kelch-like 18 (Drosophila)
mm9_v1_chr11_+_6558494_6558577	0.156234	CUCCCAA	NM_019511|Ramp3|56089|receptor (calcitonin) activity modifying protein 3	AF146524|Ramp3|56089|receptor (calcitonin) activity modifying protein 3	AJ250491|Ramp3|56089|receptor (calcitonin) activity modifying protein 3	BC024765|Ramp3|56089|receptor (calcitonin) activity modifying protein 3	AK005513|Ramp3|56089|receptor (calcitonin) activity modifying protein 3	AF209907|Ramp3|56089|receptor (calcitonin) activity modifying protein 3
mm9_v1_chr8_-_126039287_126039398	0.155523	CUCCCAA	BC046622|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	AK028187|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	AK163434|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001170975|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001170976|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_028146|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm9_v1_chr7_-_128125714_128125825	0.155208	CUCCCAA	BC117530|Cdr2|12585|cerebellar degeneration-related 2	BC118511|Cdr2|12585|cerebellar degeneration-related 2	AK171706|Cdr2|12585|cerebellar degeneration-related 2	U88588|Cdr2|12585|cerebellar degeneration-related 2	AK157902|Cdr2|12585|cerebellar degeneration-related 2	AK148057|Cdr2|12585|cerebellar degeneration-related 2	NM_007672|Cdr2|12585|cerebellar degeneration-related 2
mm9_v1_chr19_+_4510471_4510550	0.153869	CUCCCAA	NM_001162946|Pcx|18563|pyruvate carboxylase	AK170596|Pcx|18563|pyruvate carboxylase	AK170871|Pcx|18563|pyruvate carboxylase	AK148328|Pcx|18563|pyruvate carboxylase	BC055030|Pcx|18563|pyruvate carboxylase	AK128927|Pcx|18563|pyruvate carboxylase	AK172320|Pcx|18563|pyruvate carboxylase
mm9_v1_chr7_+_64846528_64846556	0.152285	CUCCCAA	AK083051|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	NM_008071|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm9_v1_chr7_-_30836383_30836414	0.151042	CUCCCAA	AK030632|Zfp14|243906|zinc finger protein 14	AK045631|Zfp14|243906|zinc finger protein 14	AK028663|Zfp14|243906|zinc finger protein 14	BC066057|Zfp14|243906|zinc finger protein 14	AK032214|Zfp14|243906|zinc finger protein 14	NM_011748|Zfp14|243906|zinc finger protein 14	NM_178733|Zfp14|243906|zinc finger protein 14
mm9_v1_chr7_-_116925058_116925063	0.15099	CUCCCAA	AK020731|Nrip3|78593|nuclear receptor interacting protein 3	AK083130|Nrip3|78593|nuclear receptor interacting protein 3	NM_020610|Nrip3|78593|nuclear receptor interacting protein 3
mm9_v1_chr14_+_12386043_12386066	0.150801	CUCCCAA	BC079595|Ptprg|19270|protein tyrosine phosphatase, receptor type, G	NM_008981|Ptprg|19270|protein tyrosine phosphatase, receptor type, G
mm9_v1_chr12_+_3806955_3807159	0.150058	CUCCCAA	NM_007872|Dnmt3a|13435|DNA methyltransferase 3A	AF503867|Dnmt3a|13435|DNA methyltransferase 3A	AK090132|Dnmt3a|13435|DNA methyltransferase 3A	AK147676|Dnmt3a|13435|DNA methyltransferase 3A	BC007466|Dnmt3a|13435|DNA methyltransferase 3A	AF068625|Dnmt3a|13435|DNA methyltransferase 3A	AK147263|Dnmt3a|13435|DNA methyltransferase 3A	AK147627|Dnmt3a|13435|DNA methyltransferase 3A	AK147642|Dnmt3a|13435|DNA methyltransferase 3A
mm9_v1_chr15_+_101004502_101004580	0.149052	CUCCCAA	BC145775|Acvr1b|11479|activin A receptor, type 1B	BC145777|Acvr1b|11479|activin A receptor, type 1B	AK154578|Acvr1b|11479|activin A receptor, type 1B	AK157910|Acvr1b|11479|activin A receptor, type 1B	NM_007395|Acvr1b|11479|activin A receptor, type 1B	BC059832|Acvr1b|11479|activin A receptor, type 1B	Z31663|Acvr1b|11479|activin A receptor, type 1B
mm9_v1_chr5_-_139960431_139960476	0.148091	CUCCCAA	NM_001159908|Zfand2a|100494|zinc finger, AN1-type domain 2A	NM_133349|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr1_+_95582188_95582371	0.147496	CUCCCAA	AK156243|Bok|51800|BCL2-related ovarian killer protein	NM_016778|Bok|51800|BCL2-related ovarian killer protein	AF027707|Bok|51800|BCL2-related ovarian killer protein	AK171258|Bok|51800|BCL2-related ovarian killer protein	BC030069|Bok|51800|BCL2-related ovarian killer protein	AK168373|Bok|51800|BCL2-related ovarian killer protein
mm9_v1_chr9_-_78435825_78435857	0.147231	CUCCCAA	AK029102|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5	AK087395|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5	NM_172773|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5
mm9_v1_chr5_+_130620730_130620855	0.146965	CUCCCAA	AK162568|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK083583|Kctd7|212919|potassium channel tetramerisation domain containing 7	NM_172509|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK029942|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK034583|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK140606|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC139070|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC141201|Kctd7|212919|potassium channel tetramerisation domain containing 7
mm9_v1_chr16_+_96502595_96502638	0.146924	CUCCCAA	BC057887|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	NM_033149|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm9_v1_chr15_+_79921725_79921855	0.145894	CUCCCAA	BC138728|Syngr1|20972|synaptogyrin 1	BC138729|Syngr1|20972|synaptogyrin 1	NM_009303|Syngr1|20972|synaptogyrin 1	NM_207708|Syngr1|20972|synaptogyrin 1	AK044007|Syngr1|20972|synaptogyrin 1	AJ002306|Syngr1|20972|synaptogyrin 1	AK156134|Syngr1|20972|synaptogyrin 1	AK002972|Syngr1|20972|synaptogyrin 1	AK010442|Syngr1|20972|synaptogyrin 1	AK153096|Syngr1|20972|synaptogyrin 1	AK153187|Syngr1|20972|synaptogyrin 1	BC048172|Syngr1|20972|synaptogyrin 1	AK194549|Syngr1|20972|synaptogyrin 1
mm9_v1_chr8_-_13677450_13677625	0.145188	CUCCCAA	BC068297|Rasa3|19414|RAS p21 protein activator 3	AK147896|Rasa3|19414|RAS p21 protein activator 3	U20238|Rasa3|19414|RAS p21 protein activator 3	BC057300|Rasa3|19414|RAS p21 protein activator 3	AK053353|Rasa3|19414|RAS p21 protein activator 3	AK166354|Rasa3|19414|RAS p21 protein activator 3	NM_009025|Rasa3|19414|RAS p21 protein activator 3	AK141511|Rasa3|19414|RAS p21 protein activator 3	BC060195|Rasa3|19414|RAS p21 protein activator 3
mm9_v1_chr1_-_99666564_99666675	0.145162	CUCCCAA	AK087712|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK149804|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK129140|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK166095|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	NM_173760|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2
mm9_v1_chr3_-_54719808_54719808	0.145061	CUCCCAA	AK031306|6030405A18Rik|329641|RIKEN cDNA 6030405A18 gene	NM_177854|6030405A18Rik|329641|RIKEN cDNA 6030405A18 gene
mm9_v1_chr12_-_113749363_113749407	0.145006	CUCCCAA	AK047810|Tmem179|104885|transmembrane protein 179	NM_178915|Tmem179|104885|transmembrane protein 179	BC046482|Tmem179|104885|transmembrane protein 179	AK090230|Tmem179|104885|transmembrane protein 179
mm9_v1_chr11_+_5855721_5855888	0.144891	CUCCCAA	NM_019661|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK002916|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK007486|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK147098|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK150472|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK159253|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	BC006760|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AF076956|Ykt6|56418|YKT6 homolog (S. Cerevisiae)
mm9_v1_chr6_-_83781704_83781750	0.143126	CUCCCAA	AK140686|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK159287|Paip2b|232164|poly(A) binding protein interacting protein 2B	NM_146169|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr5_-_124545776_124545806	0.142971	CUCCCAA	AK044140|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9	AB093298|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9	BC026455|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9	AF216495|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9	NM_019875|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9
mm9_v1_chr11_+_94871181_94871224	0.139835	CUCCCAA	AK049753|Samd14|217125|sterile alpha motif domain containing 14	NM_146025|Samd14|217125|sterile alpha motif domain containing 14	AK047184|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr18_-_75857207_75857349	0.138766	CUCCCAA	BC058104|Ctif|269037|CBP80/20-dependent translation initiation factor	NM_201354|Ctif|269037|CBP80/20-dependent translation initiation factor
mm9_v1_chr8_-_125736641_125736711	0.137853	CUCCCAA	BC023807|Chmp1a|234852|chromatin modifying protein 1A	BC036152|Chmp1a|234852|chromatin modifying protein 1A	AK046416|Chmp1a|234852|chromatin modifying protein 1A	AK159830|Chmp1a|234852|chromatin modifying protein 1A	NM_145606|Chmp1a|234852|chromatin modifying protein 1A
mm9_v1_chr1_-_132612309_132612397	0.136455	CUCCCAA	X98847|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	BC051014|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	BC018418|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	AK146744|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	NM_008825|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr14_-_67487226_67487503	0.135996	CUCCCAA	Y10339|Dpysl2|12934|dihydropyrimidinase-like 2	X87242|Dpysl2|12934|dihydropyrimidinase-like 2	BC062955|Dpysl2|12934|dihydropyrimidinase-like 2	NM_009955|Dpysl2|12934|dihydropyrimidinase-like 2
mm9_v1_chr2_+_181255209_181255262	0.135971	CUCCCAA	NM_016775|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5	AK083584|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5	AK007879|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5	AK029006|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5	AK032373|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5	BC018231|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5
mm9_v1_chr3_-_95032589_95032623	0.135646	CUCCCAA	AK152708|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	NM_019914|Mllt11|56772|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm9_v1_chr4_+_137806293_137806394	0.135324	CUCCCAA	DQ832275|Sh2d5|230863|SH2 domain containing 5	NM_001099631|Sh2d5|230863|SH2 domain containing 5	BC036961|Sh2d5|230863|SH2 domain containing 5	AK032598|Sh2d5|230863|SH2 domain containing 5
mm9_v1_chr15_-_63891810_63892112	0.1353	CUCCCAA	AK075613|Fam49b|223601|family with sequence similarity 49, member B	AK043641|Fam49b|223601|family with sequence similarity 49, member B	AK028062|Fam49b|223601|family with sequence similarity 49, member B	NM_144846|Fam49b|223601|family with sequence similarity 49, member B
mm9_v1_chr8_-_63433528_63433596	0.134099	CUCCCAA	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr19_-_40588297_40588344	0.132683	CUCCCAA	NM_009166|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr16_-_35769389_35769480	0.13098	CUCCCAA	BC037460|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK034214|Dirc2|224132|disrupted in renal carcinoma 2 (human)	NM_153550|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK172331|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr5_-_113739711_113739807	0.130941	CUCCCAA	BC138049|Sgsm1|52850|small G protein signaling modulator 1	BC138050|Sgsm1|52850|small G protein signaling modulator 1	AK053555|Sgsm1|52850|small G protein signaling modulator 1	AK044716|Sgsm1|52850|small G protein signaling modulator 1	AK170021|Sgsm1|52850|small G protein signaling modulator 1	NM_001162965|Sgsm1|52850|small G protein signaling modulator 1	NM_172718|Sgsm1|52850|small G protein signaling modulator 1
mm9_v1_chr11_-_61393108_61393198	0.129147	CUCCCAA	AK195274|Epn2|13855|epsin 2	AK139793|Epn2|13855|epsin 2	BC039138|Epn2|13855|epsin 2	NM_010148|Epn2|13855|epsin 2	AK036331|Epn2|13855|epsin 2	AK173093|Epn2|13855|epsin 2	AK139234|Epn2|13855|epsin 2	AK160782|Epn2|13855|epsin 2
mm9_v1_chr2_-_25477449_25477538	0.128922	CUCCCAA	BC048537|Tmem141|51875|transmembrane protein 141	AK004380|Tmem141|51875|transmembrane protein 141	NM_001040130|Tmem141|51875|transmembrane protein 141	NM_001109993|Tmem141|51875|transmembrane protein 141
mm9_v1_chrX_-_163647088_163647149	0.127942	CUCCCAA	AK010659|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK088783|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK162286|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169718|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169108|Tmsb4x|19241|thymosin, beta 4, X chromosome	NM_021278|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr2_-_37286367_37286438	0.127501	CUCCCAA	BC032933|Zbtb6|241322|zinc finger and BTB domain containing 6	AK044125|Zbtb6|241322|zinc finger and BTB domain containing 6	AK050827|Zbtb6|241322|zinc finger and BTB domain containing 6	NM_146253|Zbtb6|241322|zinc finger and BTB domain containing 6
mm9_v1_chr13_-_46060325_46060353	0.127377	CUCCCAA	BC058178|Atxn1|20238|ataxin 1	AK048268|Atxn1|20238|ataxin 1	NM_009124|Atxn1|20238|ataxin 1	AK169931|Atxn1|20238|ataxin 1
mm9_v1_chr6_+_129483206_129483210	0.127	CUCCCAA	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr11_-_116442760_116442770	0.126623	CUCCCAA	AK129431|Ube2o|217342|ubiquitin-conjugating enzyme E2O	NM_173755|Ube2o|217342|ubiquitin-conjugating enzyme E2O
mm9_v1_chr19_+_32832002_32832163	0.126608	CUCCCAA	NM_008960|Pten|19211|phosphatase and tensin homolog	AK164302|Pten|19211|phosphatase and tensin homolog	AK088717|Pten|19211|phosphatase and tensin homolog	AK076980|Pten|19211|phosphatase and tensin homolog
mm9_v1_chr1_-_174136874_174136913	0.126514	CUCCCAA	NM_011063|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr6_+_137200819_137200985	0.125796	CUCCCAA	NM_001164401|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	NM_011216|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	AK045929|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	AF135166|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	BC052743|Ptpro|19277|protein tyrosine phosphatase, receptor type, O
mm9_v1_chr6_+_47194393_47194453	0.125674	CUCCCAA	NM_025771|Cntnap2|66797|contactin associated protein-like 2	AK017341|Cntnap2|66797|contactin associated protein-like 2	AK013139|Cntnap2|66797|contactin associated protein-like 2	BC029826|Cntnap2|66797|contactin associated protein-like 2	BC103799|Cntnap2|66797|contactin associated protein-like 2
mm9_v1_chr12_-_68323528_68323535	0.122737	CUCCCAA	AK034513|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	AK137667|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_001193266|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_207010|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2
mm9_v1_chr4_-_151851574_151851597	0.122629	CUCCCAA	BC039178|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2	NM_010598|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2	U31908|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm9_v1_chr11_-_45758413_45758456	0.121973	CUCCCAA	AF514309|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11	BC094286|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11	AK143661|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11	AK082292|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11	NM_028185|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11
mm9_v1_chr11_-_88725877_88725929	0.121144	CUCCCAA	AK076216|Akap1|11640|A kinase (PRKA) anchor protein 1	NM_001042541|Akap1|11640|A kinase (PRKA) anchor protein 1
mm9_v1_chr14_-_47441795_47441916	0.120068	CUCCCAA	AB001732|Gmfb|63985|glia maturation factor, beta	BC040233|Gmfb|63985|glia maturation factor, beta	AB050013|Gmfb|63985|glia maturation factor, beta	BC049134|Gmfb|63985|glia maturation factor, beta	AK013970|Gmfb|63985|glia maturation factor, beta	AK013947|Gmfb|63985|glia maturation factor, beta	AF297220|Gmfb|63985|glia maturation factor, beta	AK142014|Gmfb|63985|glia maturation factor, beta	NM_022023|Gmfb|63985|glia maturation factor, beta
mm9_v1_chr3_-_30868320_30868353	0.11859	CUCCCAA	BC132533|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145123|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145124|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AJ414610|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK037348|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK087339|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166208|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166296|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165954|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165955|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165956|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_153421|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr7_-_89796961_89797037	0.118137	CUCCCAA	AK007285|Fam154b|330577|family with sequence similarity 154, member B	AK007315|Fam154b|330577|family with sequence similarity 154, member B	AK051095|Fam154b|330577|family with sequence similarity 154, member B	AK038727|Fam154b|330577|family with sequence similarity 154, member B	NM_177894|Fam154b|330577|family with sequence similarity 154, member B
mm9_v1_chr17_-_33897428_33897430	0.118058	CUCCCAA	NM_008997|Rab11b|19326|RAB11B, member RAS oncogene family
mm9_v1_chr4_-_46614726_46614844	0.116198	CUCCCAA	AK045728|Coro2a|107684|coronin, actin binding protein 2A	AK033455|Coro2a|107684|coronin, actin binding protein 2A	AK030971|Coro2a|107684|coronin, actin binding protein 2A	AK154247|Coro2a|107684|coronin, actin binding protein 2A	AK170184|Coro2a|107684|coronin, actin binding protein 2A	AK044060|Coro2a|107684|coronin, actin binding protein 2A	AK152490|Coro2a|107684|coronin, actin binding protein 2A	AK153134|Coro2a|107684|coronin, actin binding protein 2A	AK054394|Coro2a|107684|coronin, actin binding protein 2A	NM_001164804|Coro2a|107684|coronin, actin binding protein 2A
mm9_v1_chr8_+_74092790_74092825	0.115869	CUCCCAA	BC028937|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	NM_011977|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr17_-_26056379_26056705	0.115394	CUCCCAA	AB232639|Rab40c|224624|Rab40c, member RAS oncogene family	AF422144|Rab40c|224624|Rab40c, member RAS oncogene family	BC037461|Rab40c|224624|Rab40c, member RAS oncogene family	BC027008|Rab40c|224624|Rab40c, member RAS oncogene family	NM_139154|Rab40c|224624|Rab40c, member RAS oncogene family
mm9_v1_chr17_-_66868909_66869045	0.114359	CUCCCAA	AB232607|Rab12|19328|RAB12, member RAS oncogene family	NM_024448|Rab12|19328|RAB12, member RAS oncogene family
mm9_v1_chr6_-_56312170_56312512	0.113213	CUCCCAA	AK082497|Pde1c|18575|phosphodiesterase 1C	BC032277|Pde1c|18575|phosphodiesterase 1C	AK139923|Pde1c|18575|phosphodiesterase 1C	AK017183|Pde1c|18575|phosphodiesterase 1C	AK082180|Pde1c|18575|phosphodiesterase 1C	AK030423|Pde1c|18575|phosphodiesterase 1C	NM_001025568|Pde1c|18575|phosphodiesterase 1C	NM_001159952|Pde1c|18575|phosphodiesterase 1C	NM_001159953|Pde1c|18575|phosphodiesterase 1C	L76946|Pde1c|18575|phosphodiesterase 1C	NM_011054|Pde1c|18575|phosphodiesterase 1C
mm9_v1_chrX_+_21061748_21061785	0.112582	CUCCCAA	AK140941|Agtr2|11609|angiotensin II receptor, type 2	AK086334|Agtr2|11609|angiotensin II receptor, type 2	NM_007429|Agtr2|11609|angiotensin II receptor, type 2	L32840|Agtr2|11609|angiotensin II receptor, type 2	S67465|Agtr2|11609|angiotensin II receptor, type 2	U04828|Agtr2|11609|angiotensin II receptor, type 2
mm9_v1_chr11_-_100599413_100599524	0.112495	CUCCCAA	AK134691|Rab5c|19345|RAB5C, member RAS oncogene family	BC029678|Rab5c|19345|RAB5C, member RAS oncogene family	NM_024456|Rab5c|19345|RAB5C, member RAS oncogene family	BC023027|Rab5c|19345|RAB5C, member RAS oncogene family	AK172328|Rab5c|19345|RAB5C, member RAS oncogene family	AK159832|Rab5c|19345|RAB5C, member RAS oncogene family	AK167599|Rab5c|19345|RAB5C, member RAS oncogene family	AK089199|Rab5c|19345|RAB5C, member RAS oncogene family	AK170540|Rab5c|19345|RAB5C, member RAS oncogene family
mm9_v1_chr17_-_24278482_24278583	0.112118	CUCCCAA	AK165564|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AF126294|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK149162|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	BC146001|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	BC146003|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AF079535|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK149289|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AF086625|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK162677|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK143283|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK147835|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK147149|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	NM_001080773|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	NM_011062|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1
mm9_v1_chr17_+_53618542_53618596	0.111924	CUCCCAA	AK081999|Rab5a|271457|RAB5A, member RAS oncogene family	NM_025887|Rab5a|271457|RAB5A, member RAS oncogene family	AK076093|Rab5a|271457|RAB5A, member RAS oncogene family	BC096481|Rab5a|271457|RAB5A, member RAS oncogene family
mm9_v1_chr9_+_95459990_95460369	0.111059	CUCCCAA	AY424298|Paqr9|75552|progestin and adipoQ receptor family member IX	NM_198414|Paqr9|75552|progestin and adipoQ receptor family member IX	AK133021|Paqr9|75552|progestin and adipoQ receptor family member IX
mm9_v1_chr1_+_75476106_75476188	0.11041	CUCCCAA	NM_177056|Tmem198|319998|transmembrane protein 198	BC059868|Tmem198|319998|transmembrane protein 198	AK038957|Tmem198|319998|transmembrane protein 198	AK082334|Tmem198|319998|transmembrane protein 198
mm9_v1_chr10_+_74429876_74429984	0.109848	CUCCCAA	NM_010311|Gnaz|14687|guanine nucleotide binding protein, alpha z subunit	AK080716|Gnaz|14687|guanine nucleotide binding protein, alpha z subunit
mm9_v1_chr1_+_88199795_88199833	0.108866	CUCCCAA	NM_145222|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AK080081|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AF502429|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
mm9_v1_chr11_-_70034477_70034547	0.108138	CUCCCAA	AK028143|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13	AK028759|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13	NM_172371|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm9_v1_chr7_+_25315666_25315756	0.106213	CUCCCAA	NM_153134|Irgq|210146|immunity-related GTPase family, Q	BC056347|Irgq|210146|immunity-related GTPase family, Q	BC080294|Irgq|210146|immunity-related GTPase family, Q	AK051117|Irgq|210146|immunity-related GTPase family, Q
mm9_v1_chr7_+_5031809_5032021	0.105361	CUCCCAA	AK155033|Epn1|13854|epsin 1	BC067206|Epn1|13854|epsin 1	BC099682|Epn1|13854|epsin 1	NM_010147|Epn1|13854|epsin 1
mm9_v1_chr6_+_4853319_4853431	0.104523	CUCCCAA	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr7_-_96487247_96487305	0.104073	CUCCCAA	AK013269|Tmem135|72759|transmembrane protein 135	AK028846|Tmem135|72759|transmembrane protein 135	AK047200|Tmem135|72759|transmembrane protein 135	BC033279|Tmem135|72759|transmembrane protein 135	NM_028343|Tmem135|72759|transmembrane protein 135
mm9_v1_chr7_+_64845887_64845914	0.103069	CUCCCAA	AK083107|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	NM_001038701|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm9_v1_chr6_+_86992796_86992906	0.103043	CUCCCAA	AK087173|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	NM_013528|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK019852|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK039792|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC050762|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AF334736|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC010516|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr18_+_34380575_34380671	0.102758	CUCCCAA	AK042021|Apc|11789|adenomatosis polyposis coli	AK080907|Apc|11789|adenomatosis polyposis coli	NM_007462|Apc|11789|adenomatosis polyposis coli	AK046280|Apc|11789|adenomatosis polyposis coli	AK045053|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr1_-_136131981_136132033	0.102598	CUCCCAA	NM_001008533|Adora1|11539|adenosine A1 receptor	AK038774|Adora1|11539|adenosine A1 receptor	NM_001039510|Adora1|11539|adenosine A1 receptor	AK134532|Adora1|11539|adenosine A1 receptor
mm9_v1_chr8_+_85689250_85689250	0.102124	CUCCCAA	AK049049|Tbc1d9|71310|TBC1 domain family, member 9	NM_001111304|Tbc1d9|71310|TBC1 domain family, member 9	NM_027758|Tbc1d9|71310|TBC1 domain family, member 9
mm9_v1_chr10_+_4795808_4795848	0.101725	CUCCCAA	AF535143|Syne1|64009|synaptic nuclear envelope 1	NM_153399|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr11_+_74644411_74644428	0.101475	CUCCCAA	NM_010813|Mnt|17428|max binding protein	U77356|Mnt|17428|max binding protein
mm9_v1_chr5_-_31350374_31350626	0.10114	CUCCCAA	AK161633|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	NM_177870|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	AK088682|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm9_v1_chr9_+_94570310_94570389	0.100469	CUCCCAA	NM_177909|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK037058|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC153825|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC099942|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK172687|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK156494|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm9_v1_chr11_+_97660946_97661134	0.10044	CUCCCAA	X96702|Lasp1|16796|LIM and SH3 protein 1	AK148858|Lasp1|16796|LIM and SH3 protein 1	AK034404|Lasp1|16796|LIM and SH3 protein 1	AK049199|Lasp1|16796|LIM and SH3 protein 1	AK078445|Lasp1|16796|LIM and SH3 protein 1	AK168521|Lasp1|16796|LIM and SH3 protein 1	AK169381|Lasp1|16796|LIM and SH3 protein 1	NM_010688|Lasp1|16796|LIM and SH3 protein 1	AK154656|Lasp1|16796|LIM and SH3 protein 1	BC010840|Lasp1|16796|LIM and SH3 protein 1	X96973|Lasp1|16796|LIM and SH3 protein 1	CT010288|Lasp1|16796|LIM and SH3 protein 1
mm9_v1_chr11_-_97914582_97914775	0.100401	CUCCCAA	AJ608761|Stac2|217154|SH3 and cysteine rich domain 2	BC029794|Stac2|217154|SH3 and cysteine rich domain 2	AK144433|Stac2|217154|SH3 and cysteine rich domain 2	AK079357|Stac2|217154|SH3 and cysteine rich domain 2	BC024864|Stac2|217154|SH3 and cysteine rich domain 2	AK078132|Stac2|217154|SH3 and cysteine rich domain 2	NM_146028|Stac2|217154|SH3 and cysteine rich domain 2
mm9_v1_chr16_+_3884618_3884768	0.0996185	CUCCCAA	NM_029090|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	AK039910|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	BC004837|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	AK088736|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	AK004750|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)
mm9_v1_chr3_-_87689483_87689550	0.0991268	CUCCCAA	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr11_+_49660238_49660298	0.0990999	CUCCCAA	NM_001163671|Mapk9|26420|mitogen-activated protein kinase 9	NM_001163672|Mapk9|26420|mitogen-activated protein kinase 9	NM_016961|Mapk9|26420|mitogen-activated protein kinase 9	NM_207692|Mapk9|26420|mitogen-activated protein kinase 9	AK031959|Mapk9|26420|mitogen-activated protein kinase 9	AK090057|Mapk9|26420|mitogen-activated protein kinase 9	AK145083|Mapk9|26420|mitogen-activated protein kinase 9	BC028341|Mapk9|26420|mitogen-activated protein kinase 9
mm9_v1_chr14_+_21526757_21526874	0.0987622	CUCCCAA	AK147398|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	NM_027996|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	AK053265|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151046|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151056|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC151173|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene	BC172103|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene
mm9_v1_chr4_-_87679175_87679310	0.0987128	CUCCCAA	BC021420|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AF372456|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_027326|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr5_-_113444509_113444571	0.0983583	CUCCCAA	AK172513|Adrbk2|320129|adrenergic receptor kinase, beta 2	AK048763|Adrbk2|320129|adrenergic receptor kinase, beta 2	AK134672|Adrbk2|320129|adrenergic receptor kinase, beta 2	AK141186|Adrbk2|320129|adrenergic receptor kinase, beta 2	NM_001035531|Adrbk2|320129|adrenergic receptor kinase, beta 2	NM_177078|Adrbk2|320129|adrenergic receptor kinase, beta 2
mm9_v1_chr2_+_181501718_181501871	0.0971813	CUCCCAA	AK165786|Myt1|17932|myelin transcription factor 1	NM_001171616|Myt1|17932|myelin transcription factor 1	NM_008665|Myt1|17932|myelin transcription factor 1	AB082378|Myt1|17932|myelin transcription factor 1	AK082994|Myt1|17932|myelin transcription factor 1
mm9_v1_chr2_-_92300631_92300701	0.0946	CUCCCAA	AK050311|Slc35c1|228368|solute carrier family 35, member C1	AK045972|Slc35c1|228368|solute carrier family 35, member C1	AK088227|Slc35c1|228368|solute carrier family 35, member C1	AK030977|Slc35c1|228368|solute carrier family 35, member C1	NM_145832|Slc35c1|228368|solute carrier family 35, member C1
mm9_v1_chr11_+_57332162_57332229	0.0943906	CUCCCAA	AK076071|Mfap3|216760|microfibrillar-associated protein 3	NM_145426|Mfap3|216760|microfibrillar-associated protein 3	NM_180599|Mfap3|216760|microfibrillar-associated protein 3	AK042988|Mfap3|216760|microfibrillar-associated protein 3	AK080405|Mfap3|216760|microfibrillar-associated protein 3	AK155122|Mfap3|216760|microfibrillar-associated protein 3	BC006828|Mfap3|216760|microfibrillar-associated protein 3
mm9_v1_chr3_-_108248053_108248111	0.0928626	CUCCCAA	AK077309|Sars|20226|seryl-aminoacyl-tRNA synthetase	BC008612|Sars|20226|seryl-aminoacyl-tRNA synthetase	BC031932|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK147825|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK082793|Sars|20226|seryl-aminoacyl-tRNA synthetase	NM_011319|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK028358|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK075827|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr7_+_19661548_19661579	0.0889309	CUCCCAA	NM_010058|Dmwd|13401|dystrophia myotonica-containing WD repeat motif
mm9_v1_chr2_-_32143495_32143593	0.0882711	CUCCCAA	AK018775|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK166608|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK041567|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK013517|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	BC021748|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK088274|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK039840|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK031907|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AB597964|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	NM_175190|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene
mm9_v1_chr2_-_73613381_73613446	0.087992	CUCCCAA	NM_001113246|Chn1|108699|chimerin (chimaerin) 1	NM_001166603|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr16_+_55973916_55973970	0.087493	CUCCCAA	NM_173026|Zbtb11|271377|zinc finger and BTB domain containing 11
mm9_v1_chr3_-_127483385_127483450	0.0870636	CUCCCAA	AK018401|Alpk1|71481|alpha-kinase 1	AK041315|Alpk1|71481|alpha-kinase 1	AK173191|Alpk1|71481|alpha-kinase 1	NM_027808|Alpk1|71481|alpha-kinase 1
mm9_v1_chr8_-_73987384_73987575	0.0858581	CUCCCAA	AK178916|Abhd8|64296|abhydrolase domain containing 8	AK212822|Abhd8|64296|abhydrolase domain containing 8	BC026540|Abhd8|64296|abhydrolase domain containing 8	AK037669|Abhd8|64296|abhydrolase domain containing 8	AK003090|Abhd8|64296|abhydrolase domain containing 8	AB030191|Abhd8|64296|abhydrolase domain containing 8	AK080618|Abhd8|64296|abhydrolase domain containing 8	AK155503|Abhd8|64296|abhydrolase domain containing 8	NM_022419|Abhd8|64296|abhydrolase domain containing 8
mm9_v1_chr2_+_153117135_153117203	0.0856291	CUCCCAA	NM_008444|Kif3b|16569|kinesin family member 3B	AK147467|Kif3b|16569|kinesin family member 3B	AK083700|Kif3b|16569|kinesin family member 3B	AK148200|Kif3b|16569|kinesin family member 3B	BC065132|Kif3b|16569|kinesin family member 3B	AK122258|Kif3b|16569|kinesin family member 3B	AK081541|Kif3b|16569|kinesin family member 3B
mm9_v1_chr6_-_116143380_116143517	0.083362	CUCCCAA	AK173022|Tmcc1|330401|transmembrane and coiled coil domains 1	NM_177412|Tmcc1|330401|transmembrane and coiled coil domains 1
mm9_v1_chr8_-_72662994_72663095	0.0832841	CUCCCAA	AF123704|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	L43164|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AF094761|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AK146148|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AK087462|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	AK052298|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	NM_001025589|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein	NM_011266|Rfxank|19727|regulatory factor X-associated ankyrin-containing protein
mm9_v1_chr9_+_58430031_58430196	0.0826357	CUCCCAA	NM_009145|Nptn|20320|neuroplastin	BC039191|Nptn|20320|neuroplastin
mm9_v1_chr11_+_121313260_121313262	0.081976	CUCCCAA	AK050199|Tbcd|108903|tubulin-specific chaperone d	NM_029878|Tbcd|108903|tubulin-specific chaperone d
mm9_v1_chr7_+_24919177_24919260	0.0815169	CUCCCAA	NM_019941|Zfp235|56525|zinc finger protein 235	AK045726|Zfp235|56525|zinc finger protein 235	AK002713|Zfp235|56525|zinc finger protein 235	AK147833|Zfp235|56525|zinc finger protein 235	AF167321|Zfp235|56525|zinc finger protein 235	AK139127|Zfp235|56525|zinc finger protein 235	BC099965|Zfp235|56525|zinc finger protein 235
mm9_v1_chr15_-_97662101_97662197	0.0813734	CUCCCAA	BC057332|Hdac7|56233|histone deacetylase 7	NM_019572|Hdac7|56233|histone deacetylase 7	AY943912|Hdac7|56233|histone deacetylase 7
mm9_v1_chr11_+_121121273_121121393	0.0812241	CUCCCAA	EU882160|Foxk2|68837|forkhead box K2	NM_001080932|Foxk2|68837|forkhead box K2	AK139325|Foxk2|68837|forkhead box K2
mm9_v1_chr11_+_3230733_3230843	0.0808934	CUCCCAA	NM_178149|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK028419|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK029304|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK154842|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK005141|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK160300|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528081|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC055920|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC079641|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528078|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC028479|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1
mm9_v1_chr17_-_46693110_46693149	0.0807941	CUCCCAA	NM_020493|Srf|20807|serum response factor	BC051950|Srf|20807|serum response factor
mm9_v1_chr2_+_32092184_32092232	0.0783207	CUCCCAA	AK053326|Pomt1|99011|protein-O-mannosyltransferase 1	BC027325|Pomt1|99011|protein-O-mannosyltransferase 1	NM_145145|Pomt1|99011|protein-O-mannosyltransferase 1	AK053889|Pomt1|99011|protein-O-mannosyltransferase 1	AK200298|Pomt1|99011|protein-O-mannosyltransferase 1
mm9_v1_chr7_+_134388006_134388047	0.0783042	CUCCCAA	AK090240|Zfp771|244216|zinc finger protein 771	NM_177362|Zfp771|244216|zinc finger protein 771	AK159461|Zfp771|244216|zinc finger protein 771
mm9_v1_chr3_-_104667319_104667422	0.0782986	CUCCCAA	AK161370|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1	NM_009797|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1
mm9_v1_chr14_+_55502261_55502285	0.0773328	CUCCCAA	AF030769|Bcl2l2|12050|BCL2-like 2	NM_007537|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr10_+_126703317_126703496	0.0769539	CUCCCAA	NM_001190453|Dctn2|69654|dynactin 2	NM_001190454|Dctn2|69654|dynactin 2	NM_027151|Dctn2|69654|dynactin 2	AK081785|Dctn2|69654|dynactin 2	AK054390|Dctn2|69654|dynactin 2	AK164021|Dctn2|69654|dynactin 2	AK144464|Dctn2|69654|dynactin 2	AK144505|Dctn2|69654|dynactin 2	BC004613|Dctn2|69654|dynactin 2
mm9_v1_chrX_-_17149313_17149460	0.0768674	CUCCCAA	BC012515|Fundc1|72018|FUN14 domain containing 1	AK168868|Fundc1|72018|FUN14 domain containing 1	BC030487|Fundc1|72018|FUN14 domain containing 1	AK005163|Fundc1|72018|FUN14 domain containing 1	NM_028058|Fundc1|72018|FUN14 domain containing 1
mm9_v1_chr3_+_142364014_142364083	0.0765837	CUCCCAA	AK145623|Ccbl2|229905|cysteine conjugate-beta lyase 2	AF363737|Ccbl2|229905|cysteine conjugate-beta lyase 2	AK049569|Ccbl2|229905|cysteine conjugate-beta lyase 2	NM_173763|Ccbl2|229905|cysteine conjugate-beta lyase 2	BC085287|Ccbl2|229905|cysteine conjugate-beta lyase 2
mm9_v1_chr9_+_108594470_108594519	0.0762961	CUCCCAA	AF533977|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	NM_008924|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC080276|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC075623|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha
mm9_v1_chr19_+_46647844_46647860	0.0754901	CUCCCAA	AK162407|Sfxn2|94279|sideroflexin 2	NM_053196|Sfxn2|94279|sideroflexin 2	AK034875|Sfxn2|94279|sideroflexin 2	BC019808|Sfxn2|94279|sideroflexin 2
mm9_v1_chr13_-_47110187_47110218	0.0751947	CUCCCAA	BC062644|Nhlrc1|105193|NHL repeat containing 1	BC118952|Nhlrc1|105193|NHL repeat containing 1	AK045746|Nhlrc1|105193|NHL repeat containing 1	BC118951|Nhlrc1|105193|NHL repeat containing 1	NM_175340|Nhlrc1|105193|NHL repeat containing 1
mm9_v1_chr12_-_103995925_103996025	0.0748246	CUCCCAA	BC055374|AK010878|100233175|cDNA sequence AK010878	BC014715|AK010878|100233175|cDNA sequence AK010878	AK018995|AK010878|100233175|cDNA sequence AK010878	AK011927|AK010878|100233175|cDNA sequence AK010878	AK006753|AK010878|100233175|cDNA sequence AK010878	AK010878|AK010878|100233175|cDNA sequence AK010878	NM_001142938|AK010878|100233175|cDNA sequence AK010878	NM_001142939|AK010878|100233175|cDNA sequence AK010878
mm9_v1_chr8_-_63462080_63462110	0.0744925	CUCCCAA	AK159698|Clcn3|12725|chloride channel 3	AK036501|Clcn3|12725|chloride channel 3	NM_007711|Clcn3|12725|chloride channel 3	NM_173873|Clcn3|12725|chloride channel 3	NM_173874|Clcn3|12725|chloride channel 3
mm9_v1_chr9_-_83334633_83334733	0.0740454	CUCCCAA	BC049101|Lca5|75782|Leber congenital amaurosis 5 (human)	BC052060|Lca5|75782|Leber congenital amaurosis 5 (human)	AK047956|Lca5|75782|Leber congenital amaurosis 5 (human)	AK015260|Lca5|75782|Leber congenital amaurosis 5 (human)	AK039510|Lca5|75782|Leber congenital amaurosis 5 (human)	NM_027448|Lca5|75782|Leber congenital amaurosis 5 (human)	NM_029434|Lca5|75782|Leber congenital amaurosis 5 (human)
mm9_v1_chr7_-_125273061_125273141	0.0738748	CUCCCAA	BC046792|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF133669|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF223953|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	BC010196|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK152885|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK090001|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK150042|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK151272|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK151507|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK152565|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK163655|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167912|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK168245|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK169191|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK150507|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK154644|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167872|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK168172|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK154355|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF172088|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167888|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	NM_019419|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr3_-_82351881_82352006	0.0726403	CUCCCAA	BC104490|Npy2r|18167|neuropeptide Y receptor Y2	BC104733|Npy2r|18167|neuropeptide Y receptor Y2	BC104734|Npy2r|18167|neuropeptide Y receptor Y2	AK018543|Npy2r|18167|neuropeptide Y receptor Y2	AK049892|Npy2r|18167|neuropeptide Y receptor Y2	D86238|Npy2r|18167|neuropeptide Y receptor Y2	NM_008731|Npy2r|18167|neuropeptide Y receptor Y2
mm9_v1_chr10_+_77441365_77441428	0.0725048	CUCCCAA	AK003097|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK004032|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	NM_026431|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	BC016605|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK075794|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	BC029982|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK165293|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK153233|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	BC010330|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK147511|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene
mm9_v1_chr5_+_48374328_48374415	0.0723098	CUCCCAA	AK053182|Slit2|20563|slit homolog 2 (Drosophila)	AK053913|Slit2|20563|slit homolog 2 (Drosophila)	AK144573|Slit2|20563|slit homolog 2 (Drosophila)	NM_178804|Slit2|20563|slit homolog 2 (Drosophila)	AK084012|Slit2|20563|slit homolog 2 (Drosophila)	AK084293|Slit2|20563|slit homolog 2 (Drosophila)
mm9_v1_chr11_+_69659873_69659874	0.0716996	CUCCCAA	AK075841|Plscr3|70310|phospholipid scramblase 3	NM_001168497|Plscr3|70310|phospholipid scramblase 3
mm9_v1_chr2_+_29989278_29989390	0.0708241	CUCCCAA	AK158066|Tbc1d13|70296|TBC1 domain family, member 13	AK188413|Tbc1d13|70296|TBC1 domain family, member 13	BC025586|Tbc1d13|70296|TBC1 domain family, member 13	NM_146252|Tbc1d13|70296|TBC1 domain family, member 13
mm9_v1_chr15_+_21041206_21041206	0.0707858	CUCCCAA	BC086655|Cdh12|215654|cadherin 12	NM_001008420|Cdh12|215654|cadherin 12
mm9_v1_chr6_+_92041408_92041534	0.0704435	CUCCCAA	NM_011630|Nr2c2|22026|nuclear receptor subfamily 2, group C, member 2	AK157305|Nr2c2|22026|nuclear receptor subfamily 2, group C, member 2
mm9_v1_chr8_+_93352723_93352742	0.0699128	CUCCCAA	AK034446|Chd9|109151|chromodomain helicase DNA binding protein 9	NM_177224|Chd9|109151|chromodomain helicase DNA binding protein 9	AK039562|Chd9|109151|chromodomain helicase DNA binding protein 9	DQ127229|Chd9|109151|chromodomain helicase DNA binding protein 9
mm9_v1_chr12_+_71926429_71926675	0.0694166	CUCCCAA	BC053929|Frmd6|319710|FERM domain containing 6	NM_028127|Frmd6|319710|FERM domain containing 6	AK054457|Frmd6|319710|FERM domain containing 6
mm9_v1_chr12_+_111839571_111839706	0.0684452	CUCCCAA	NM_030238|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1	AY004877|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1	AK045747|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1	AK052908|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1
mm9_v1_chr4_+_107474842_107475017	0.0674965	CUCCCAA	NM_001080926|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D85463|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC127061|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	AJ312058|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm9_v1_chr6_-_148392841_148392873	0.0662975	CUCCCAA	AK137545|Tmtc1|387314|transmembrane and tetratricopeptide repeat containing 1	AK046396|Tmtc1|387314|transmembrane and tetratricopeptide repeat containing 1	NM_198967|Tmtc1|387314|transmembrane and tetratricopeptide repeat containing 1
mm9_v1_chr17_+_49071906_49072030	0.0662592	CUCCCAA	BC139418|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	NM_027452|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK122476|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK044375|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2
mm9_v1_chr4_-_133189327_133189466	0.0662382	CUCCCAA	NM_001017968|Zdhhc18|503610|zinc finger, DHHC domain containing 18
mm9_v1_chr6_+_124959685_124959822	0.0660782	CUCCCAA	AK086185|Zfp384|269800|zinc finger protein 384	BC064013|Zfp384|269800|zinc finger protein 384	NM_175557|Zfp384|269800|zinc finger protein 384
mm9_v1_chr19_+_10652212_10652359	0.0659794	CUCCCAA	BC065078|Cybasc3|225912|cytochrome b, ascorbate dependent 3	NM_201351|Cybasc3|225912|cytochrome b, ascorbate dependent 3
mm9_v1_chr6_-_122692754_122692762	0.0656266	CUCCCAA	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr6_-_121423682_121423717	0.0652772	CUCCCAA	AK122446|Iqsec3|243621|IQ motif and Sec7 domain 3	AK147268|Iqsec3|243621|IQ motif and Sec7 domain 3	AK169437|Iqsec3|243621|IQ motif and Sec7 domain 3	NM_001033354|Iqsec3|243621|IQ motif and Sec7 domain 3
mm9_v1_chr10_+_40349816_40349885	0.0647271	CUCCCAA	AK033375|Ddo|70503|D-aspartate oxidase	NM_027442|Ddo|70503|D-aspartate oxidase	AK019898|Ddo|70503|D-aspartate oxidase	AK085947|Ddo|70503|D-aspartate oxidase	AK165344|Ddo|70503|D-aspartate oxidase	AK017475|Ddo|70503|D-aspartate oxidase	AK161548|Ddo|70503|D-aspartate oxidase	BC027312|Ddo|70503|D-aspartate oxidase	BC006690|Ddo|70503|D-aspartate oxidase	AM180091|Ddo|70503|D-aspartate oxidase	AB274968|Ddo|70503|D-aspartate oxidase
mm9_v1_chr2_-_32549637_32549722	0.0647254	CUCCCAA	BC005484|Fpgs|14287|folylpolyglutamyl synthetase	U32197|Fpgs|14287|folylpolyglutamyl synthetase	AK041952|Fpgs|14287|folylpolyglutamyl synthetase	AK157040|Fpgs|14287|folylpolyglutamyl synthetase	U33557|Fpgs|14287|folylpolyglutamyl synthetase	NM_010236|Fpgs|14287|folylpolyglutamyl synthetase
mm9_v1_chr2_-_74416925_74417031	0.0637738	CUCCCAA	AY312281|Lnp|69605|limb and neural patterns	BC057961|Lnp|69605|limb and neural patterns	AK173241|Lnp|69605|limb and neural patterns	AK053593|Lnp|69605|limb and neural patterns	AK143497|Lnp|69605|limb and neural patterns	AK009311|Lnp|69605|limb and neural patterns	AK136506|Lnp|69605|limb and neural patterns	AK082900|Lnp|69605|limb and neural patterns	AK137445|Lnp|69605|limb and neural patterns	NM_001110209|Lnp|69605|limb and neural patterns	NM_027133|Lnp|69605|limb and neural patterns
mm9_v1_chr7_-_126864266_126864324	0.0635594	CUCCCAA	BC004776|Thumpd1|233802|THUMP domain containing 1	NM_145585|Thumpd1|233802|THUMP domain containing 1	AK084107|Thumpd1|233802|THUMP domain containing 1	AK152912|Thumpd1|233802|THUMP domain containing 1	AK032078|Thumpd1|233802|THUMP domain containing 1
mm9_v1_chr14_+_22569752_22569797	0.063438	CUCCCAA	AK006211|Samd8|67630|sterile alpha motif domain containing 8	NM_026283|Samd8|67630|sterile alpha motif domain containing 8	BC116745|Samd8|67630|sterile alpha motif domain containing 8	BC116747|Samd8|67630|sterile alpha motif domain containing 8	AK015593|Samd8|67630|sterile alpha motif domain containing 8	BC100476|Samd8|67630|sterile alpha motif domain containing 8
mm9_v1_chr7_-_35015309_35015367	0.0632393	CUCCCAA	AK147124|Gpi1|14751|glucose phosphate isomerase 1	NM_008155|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr11_-_4060222_4060295	0.0631887	CUCCCAA	AK076934|Ccdc157|216516|coiled-coil domain containing 157	AK143216|Ccdc157|216516|coiled-coil domain containing 157	AK220409|Ccdc157|216516|coiled-coil domain containing 157	AK133165|Ccdc157|216516|coiled-coil domain containing 157	NM_001164620|Ccdc157|216516|coiled-coil domain containing 157	NM_177616|Ccdc157|216516|coiled-coil domain containing 157
mm9_v1_chr1_-_168339909_168339980	0.0625122	CUCCCAA	AK031716|Pogk|71592|pogo transposable element with KRAB domain	BC072587|Pogk|71592|pogo transposable element with KRAB domain	AK048067|Pogk|71592|pogo transposable element with KRAB domain	AK048752|Pogk|71592|pogo transposable element with KRAB domain	AK053898|Pogk|71592|pogo transposable element with KRAB domain	NM_001142948|Pogk|71592|pogo transposable element with KRAB domain	NM_175170|Pogk|71592|pogo transposable element with KRAB domain
mm9_v1_chr7_+_31278675_31278685	0.0622965	CUCCCAA	AK011039|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK050141|Prodh2|56189|proline dehydrogenase (oxidase) 2	NM_019546|Prodh2|56189|proline dehydrogenase (oxidase) 2	U80019|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK011020|Prodh2|56189|proline dehydrogenase (oxidase) 2
mm9_v1_chr17_+_71553920_71554003	0.06223	CUCCCAA	AK165218|Lpin2|64898|lipin 2	AK050018|Lpin2|64898|lipin 2	NM_001164885|Lpin2|64898|lipin 2
mm9_v1_chr17_-_34168488_34168647	0.0618874	CUCCCAA	BC115426|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	BC115427|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	M32010|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK159968|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK145956|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK087839|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK167344|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	NM_001077709|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	NM_008202|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7
mm9_v1_chr2_+_106533615_106533705	0.0617251	CUCCCAA	AK161666|Mpped2|77015|metallophosphoesterase domain containing 2	NM_001143683|Mpped2|77015|metallophosphoesterase domain containing 2	BC020182|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr5_-_31350934_31350934	0.0604654	CUCCCAA	AK158896|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	NM_001177621|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm9_v1_chr5_+_130505154_130505232	0.0592701	CUCCCAA	AF118271|Crcp|12909|calcitonin gene-related peptide-receptor component protein	NM_007761|Crcp|12909|calcitonin gene-related peptide-receptor component protein	AK075587|Crcp|12909|calcitonin gene-related peptide-receptor component protein	AF028242|Crcp|12909|calcitonin gene-related peptide-receptor component protein
mm9_v1_chr2_+_3201446_3201559	0.0592552	CUCCCAA	AK161490|Nmt2|18108|N-myristoyltransferase 2	AK168171|Nmt2|18108|N-myristoyltransferase 2	AK168190|Nmt2|18108|N-myristoyltransferase 2	AK134521|Nmt2|18108|N-myristoyltransferase 2	AK044213|Nmt2|18108|N-myristoyltransferase 2	AF043327|Nmt2|18108|N-myristoyltransferase 2	BC037647|Nmt2|18108|N-myristoyltransferase 2	NM_008708|Nmt2|18108|N-myristoyltransferase 2
mm9_v1_chr16_+_36041268_36041315	0.0588561	CUCCCAA	BC064045|Wdr5b|69544|WD repeat domain 5B	NM_027113|Wdr5b|69544|WD repeat domain 5B	EF011616|Wdr5b|69544|WD repeat domain 5B	AK149554|Wdr5b|69544|WD repeat domain 5B
mm9_v1_chr2_+_29658139_29658348	0.0586779	CUCCCAA	AK170377|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK036919|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	NM_011989|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK155313|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK155388|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK196043|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	BC023114|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4
mm9_v1_chr8_+_108692750_108692777	0.0584001	CUCCCAA	AK165979|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK165629|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK053899|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK030762|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK046548|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK049478|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK164666|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	NM_178798|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK157379|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
mm9_v1_chr2_-_181022670_181022690	0.0583476	CUCCCAA	BC059066|Gmeb2|229004|glucocorticoid modulatory element binding protein 2	NM_198169|Gmeb2|229004|glucocorticoid modulatory element binding protein 2
mm9_v1_chr11_-_80593259_80593526	0.0583391	CUCCCAA	AK188302|Myo1d|338367|myosin ID	AK203977|Myo1d|338367|myosin ID	BC150765|Myo1d|338367|myosin ID	AK037051|Myo1d|338367|myosin ID	AK049374|Myo1d|338367|myosin ID	NM_177390|Myo1d|338367|myosin ID
mm9_v1_chr12_+_3365102_3365131	0.0580962	CUCCCAA	AK220283|Kif3c|16570|kinesin family member 3C	NM_008445|Kif3c|16570|kinesin family member 3C
mm9_v1_chr14_-_56290697_56290758	0.0579094	CUCCCAA	D10918|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK147080|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	BC004625|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	AK146732|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8	NM_008683|Nedd8|18002|neural precursor cell expressed, developmentally down-regulated gene 8
mm9_v1_chr16_-_92466335_92466428	0.0578668	CUCCCAA	AY325904|Rcan1|54720|regulator of calcineurin 1	AK146764|Rcan1|54720|regulator of calcineurin 1	NM_001081549|Rcan1|54720|regulator of calcineurin 1
mm9_v1_chr2_+_48669628_48669670	0.0576885	CUCCCAA	NM_007396|Acvr2a|11480|activin receptor IIA	AK081022|Acvr2a|11480|activin receptor IIA
mm9_v1_chr18_-_25327336_25327448	0.0575241	CUCCCAA	NM_001004361|5730494M16Rik|66648|RIKEN cDNA 5730494M16 gene	NM_001142698|5730494M16Rik|66648|RIKEN cDNA 5730494M16 gene
mm9_v1_chr8_+_116159485_116159734	0.0571418	CUCCCAA	NM_001048143|Mon1b|270096|MON1 homolog b (yeast)	AK157390|Mon1b|270096|MON1 homolog b (yeast)	NM_173015|Mon1b|270096|MON1 homolog b (yeast)	AK030288|Mon1b|270096|MON1 homolog b (yeast)
mm9_v1_chr2_-_132073510_132073523	0.0570927	CUCCCAA	AK017729|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene	NM_001141971|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene	NM_027478|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene
mm9_v1_chr11_-_71949346_71949391	0.0567985	CUCCCAA	AK147444|Pitpnm3|327958|PITPNM family member 3	NM_001024927|Pitpnm3|327958|PITPNM family member 3	NM_001081641|Pitpnm3|327958|PITPNM family member 3
mm9_v1_chrX_-_137077639_137077729	0.0566367	CUCCCAA	BC028813|Tsc22d3|14605|TSC22 domain family, member 3	AF201288|Tsc22d3|14605|TSC22 domain family, member 3	AF024519|Tsc22d3|14605|TSC22 domain family, member 3	AK083389|Tsc22d3|14605|TSC22 domain family, member 3	NM_010286|Tsc22d3|14605|TSC22 domain family, member 3	AK144196|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr4_+_138908480_138908511	0.0565686	CUCCCAA	NM_001039200|C230096C10Rik|230866|RIKEN cDNA C230096C10 gene	NM_146157|C230096C10Rik|230866|RIKEN cDNA C230096C10 gene
mm9_v1_chrX_+_71550301_71550377	0.0565351	CUCCCAA	NM_010273|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1
mm9_v1_chr7_+_13551210_13551218	0.0564849	CUCCCAA	BC053093|Zfp324|243834|zinc finger protein 324	NM_178732|Zfp324|243834|zinc finger protein 324	AK054407|Zfp324|243834|zinc finger protein 324	AK044240|Zfp324|243834|zinc finger protein 324	AK165922|Zfp324|243834|zinc finger protein 324
mm9_v1_chr2_-_26758315_26758373	0.0557795	CUCCCAA	X92842|Surf6|20935|surfeit gene 6	NM_009298|Surf6|20935|surfeit gene 6	AK077989|Surf6|20935|surfeit gene 6	AK132194|Surf6|20935|surfeit gene 6
mm9_v1_chr9_+_106350967_106351018	0.0552941	CUCCCAA	NM_029631|Abhd14b|76491|abhydrolase domain containing 14b	BC019410|Abhd14b|76491|abhydrolase domain containing 14b	AK007469|Abhd14b|76491|abhydrolase domain containing 14b
mm9_v1_chr2_+_128644032_128644119	0.0551792	CUCCCAA	NM_028248|Tmem87b|72477|transmembrane protein 87B	AK050203|Tmem87b|72477|transmembrane protein 87B	AK166991|Tmem87b|72477|transmembrane protein 87B	AK164504|Tmem87b|72477|transmembrane protein 87B	AK171811|Tmem87b|72477|transmembrane protein 87B	AK172611|Tmem87b|72477|transmembrane protein 87B	BC031488|Tmem87b|72477|transmembrane protein 87B	AK011959|Tmem87b|72477|transmembrane protein 87B
mm9_v1_chr9_-_45763300_45763376	0.0550362	CUCCCAA	AK081177|Sidt2|214597|SID1 transmembrane family, member 2	BC023957|Sidt2|214597|SID1 transmembrane family, member 2	NM_172257|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr11_+_73012929_73013003	0.0549685	CUCCCAA	AK015273|Shpk|74637|sedoheptulokinase	AK171027|Shpk|74637|sedoheptulokinase	BC054721|Shpk|74637|sedoheptulokinase	BC056433|Shpk|74637|sedoheptulokinase	NM_029031|Shpk|74637|sedoheptulokinase
mm9_v1_chr12_+_117519658_117519785	0.0540327	CUCCCAA	AK044360|Esyt2|52635|extended synaptotagmin-like protein 2	NM_028731|Esyt2|52635|extended synaptotagmin-like protein 2	AK014813|Esyt2|52635|extended synaptotagmin-like protein 2	AK157352|Esyt2|52635|extended synaptotagmin-like protein 2	BC138937|Esyt2|52635|extended synaptotagmin-like protein 2
mm9_v1_chr1_+_63492447_63492511	0.0535945	CUCCCAA	AK046677|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_001177600|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_011780|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK034022|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK083458|Adam23|23792|a disintegrin and metallopeptidase domain 23
mm9_v1_chr12_+_85455277_85455306	0.0532925	CUCCCAA	NM_028821|Dnalc1|105000|dynein, axonemal, light chain 1
mm9_v1_chr2_+_166631011_166631132	0.0530686	CUCCCAA	AK087574|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	NM_001085495|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	AK087920|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	BC158012|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	AK153722|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm9_v1_chr10_+_76038388_76038430	0.0521587	CUCCCAA	NM_080845|Ftcd|14317|formiminotransferase cyclodeaminase	AK165414|Ftcd|14317|formiminotransferase cyclodeaminase	BC024078|Ftcd|14317|formiminotransferase cyclodeaminase	BC010813|Ftcd|14317|formiminotransferase cyclodeaminase
mm9_v1_chr15_-_74539748_74539751	0.0518199	CUCCCAA	AK168885|Jrk|16469|jerky	NM_008415|Jrk|16469|jerky
mm9_v1_chr2_-_102741782_102741821	0.0517805	CUCCCAA	NM_001039150|Cd44|12505|CD44 antigen	NM_001039151|Cd44|12505|CD44 antigen	NM_001177785|Cd44|12505|CD44 antigen	NM_001177786|Cd44|12505|CD44 antigen	NM_001177787|Cd44|12505|CD44 antigen	NM_009851|Cd44|12505|CD44 antigen
mm9_v1_chr4_-_88368313_88368424	0.051573	CUCCCAA	AK129338|Klhl9|242521|kelch-like 9 (Drosophila)	BC094556|Klhl9|242521|kelch-like 9 (Drosophila)	AK049803|Klhl9|242521|kelch-like 9 (Drosophila)	AK033231|Klhl9|242521|kelch-like 9 (Drosophila)	NM_172871|Klhl9|242521|kelch-like 9 (Drosophila)
mm9_v1_chr6_+_83745021_83745052	0.0513948	CUCCCAA	AK007240|Nagk|56174|N-acetylglucosamine kinase	AK084646|Nagk|56174|N-acetylglucosamine kinase	AJ242909|Nagk|56174|N-acetylglucosamine kinase	NM_019542|Nagk|56174|N-acetylglucosamine kinase	AK089238|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chr11_+_32433265_32433379	0.0509545	CUCCCAA	NM_009288|Stk10|20868|serine/threonine kinase 10	D89728|Stk10|20868|serine/threonine kinase 10	BC096624|Stk10|20868|serine/threonine kinase 10	BC069840|Stk10|20868|serine/threonine kinase 10	AK148118|Stk10|20868|serine/threonine kinase 10	AK220448|Stk10|20868|serine/threonine kinase 10	BC128363|Stk10|20868|serine/threonine kinase 10
mm9_v1_chr7_+_129432585_129432762	0.0504021	CUCCCAA	NM_008855|Prkcb|18751|protein kinase C, beta	AK051862|Prkcb|18751|protein kinase C, beta
mm9_v1_chr1_+_39957733_39957796	0.0498031	CUCCCAA	NM_008696|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr1_+_164500694_164500958	0.0498001	CUCCCAA	AK018344|Vamp4|53330|vesicle-associated membrane protein 4	AK002977|Vamp4|53330|vesicle-associated membrane protein 4	AK011678|Vamp4|53330|vesicle-associated membrane protein 4	AK031151|Vamp4|53330|vesicle-associated membrane protein 4	NM_016796|Vamp4|53330|vesicle-associated membrane protein 4
mm9_v1_chr4_+_66488753_66488865	0.0483845	CUCCCAA	AK154297|Tlr4|21898|toll-like receptor 4	AK170566|Tlr4|21898|toll-like receptor 4	AF110133|Tlr4|21898|toll-like receptor 4	NM_021297|Tlr4|21898|toll-like receptor 4	AF185285|Tlr4|21898|toll-like receptor 4
mm9_v1_chr2_+_3341402_3341476	0.0482845	CUCCCAA	NM_001110214|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	NM_146114|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	NM_175683|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AF387731|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK037126|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK088810|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK052369|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	BC108935|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK166324|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK052490|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)	AK038788|Dclre1c|227525|DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)
mm9_v1_chr15_+_88692581_88692634	0.0477087	CUCCCAA	AK168014|Pim3|223775|proviral integration site 3	BC017621|Pim3|223775|proviral integration site 3	NM_145478|Pim3|223775|proviral integration site 3
mm9_v1_chr14_-_52533114_52533162	0.0471218	CUCCCAA	NM_001145959|Ndrg2|29811|N-myc downstream regulated gene 2	NM_013864|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr11_+_59263522_59263622	0.0470749	CUCCCAA	AK047586|Jmjd4|194952|jumonji domain containing 4	AK037954|Jmjd4|194952|jumonji domain containing 4	BC049148|Jmjd4|194952|jumonji domain containing 4	AK052144|Jmjd4|194952|jumonji domain containing 4	AK032477|Jmjd4|194952|jumonji domain containing 4	AK145394|Jmjd4|194952|jumonji domain containing 4	AK079104|Jmjd4|194952|jumonji domain containing 4	AK084669|Jmjd4|194952|jumonji domain containing 4	NM_178659|Jmjd4|194952|jumonji domain containing 4	AK171919|Jmjd4|194952|jumonji domain containing 4	BC116707|Jmjd4|194952|jumonji domain containing 4	BC118020|Jmjd4|194952|jumonji domain containing 4	BC098198|Jmjd4|194952|jumonji domain containing 4
mm9_v1_chr7_+_134716853_134716888	0.0469345	CUCCCAA	AK079680|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)	NM_026888|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)
mm9_v1_chr2_+_69561103_69561149	0.046545	CUCCCAA	AK135178|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC150694|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK134121|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	NM_001081086|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC027420|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr3_-_108003697_108003757	0.0458206	CUCCCAA	AK087683|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC060107|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC137590|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_001081320|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_028061|Cyb561d1|72023|cytochrome b-561 domain containing 1	AK164441|Cyb561d1|72023|cytochrome b-561 domain containing 1
mm9_v1_chr5_-_102498929_102498975	0.0457608	CUCCCAA	AK047077|Wdfy3|72145|WD repeat and FYVE domain containing 3	AY336569|Wdfy3|72145|WD repeat and FYVE domain containing 3	NM_172882|Wdfy3|72145|WD repeat and FYVE domain containing 3
mm9_v1_chr1_-_65003291_65003407	0.0457196	CUCCCAA	AK034959|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	BC063098|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	NM_001039493|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3
mm9_v1_chr7_+_86040793_86040943	0.0455144	CUCCCAA	AK031972|Aen|68048|apoptosis enhancing nuclease	NM_001162939|Aen|68048|apoptosis enhancing nuclease	NM_026531|Aen|68048|apoptosis enhancing nuclease	AK165708|Aen|68048|apoptosis enhancing nuclease	AK012555|Aen|68048|apoptosis enhancing nuclease	AK090056|Aen|68048|apoptosis enhancing nuclease	AK166806|Aen|68048|apoptosis enhancing nuclease	AK167042|Aen|68048|apoptosis enhancing nuclease	AK076421|Aen|68048|apoptosis enhancing nuclease	AK167658|Aen|68048|apoptosis enhancing nuclease	AK017644|Aen|68048|apoptosis enhancing nuclease	AK089090|Aen|68048|apoptosis enhancing nuclease	BC022614|Aen|68048|apoptosis enhancing nuclease
mm9_v1_chr6_+_91634056_91634194	0.0444398	CUCCCAA	NM_009320|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK041141|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	L03292|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK143510|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK162776|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC015245|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm9_v1_chr9_+_65283563_65283648	0.0442015	CUCCCAA	AK009430|Mtfmt|69606|mitochondrial methionyl-tRNA formyltransferase	NM_027134|Mtfmt|69606|mitochondrial methionyl-tRNA formyltransferase	AK133492|Mtfmt|69606|mitochondrial methionyl-tRNA formyltransferase	BC019509|Mtfmt|69606|mitochondrial methionyl-tRNA formyltransferase
mm9_v1_chrX_-_162917562_162917649	0.0441067	CUCCCAA	AK032133|Rab9|56382|RAB9, member RAS oncogene family	AK010710|Rab9|56382|RAB9, member RAS oncogene family	BC008160|Rab9|56382|RAB9, member RAS oncogene family	AK017301|Rab9|56382|RAB9, member RAS oncogene family	AB027290|Rab9|56382|RAB9, member RAS oncogene family	NM_019773|Rab9|56382|RAB9, member RAS oncogene family
mm9_v1_chr5_-_23536487_23536520	0.0434784	CUCCCAA	BC060692|Fam126a|84652|family with sequence similarity 126, member A	AK155209|Fam126a|84652|family with sequence similarity 126, member A	NM_053090|Fam126a|84652|family with sequence similarity 126, member A
mm9_v1_chr19_+_46764392_46764432	0.043131	CUCCCAA	AK046524|2010012O05Rik|66439|RIKEN cDNA 2010012O05 gene	NM_025563|2010012O05Rik|66439|RIKEN cDNA 2010012O05 gene	AK008215|2010012O05Rik|66439|RIKEN cDNA 2010012O05 gene	AK007626|2010012O05Rik|66439|RIKEN cDNA 2010012O05 gene	BC027506|2010012O05Rik|66439|RIKEN cDNA 2010012O05 gene
mm9_v1_chr17_+_4995073_4995073	0.0427509	CUCCCAA	NM_001085355|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr7_+_152101004_152101187	0.0425765	CUCCCAA	AK046447|Oraov1|72284|oral cancer overexpressed 1	AK008702|Oraov1|72284|oral cancer overexpressed 1	AK083244|Oraov1|72284|oral cancer overexpressed 1	AK169310|Oraov1|72284|oral cancer overexpressed 1	AK167712|Oraov1|72284|oral cancer overexpressed 1	BC013564|Oraov1|72284|oral cancer overexpressed 1	NM_028184|Oraov1|72284|oral cancer overexpressed 1	BC006906|Oraov1|72284|oral cancer overexpressed 1
mm9_v1_chr15_-_102993714_102993747	0.0419655	CUCCCAA	BC062960|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	NM_027885|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK090367|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK198888|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK204061|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr1_+_136352075_136352146	0.0419514	CUCCCAA	AK034170|Klhl12|240756|kelch-like 12 (Drosophila)	AK165280|Klhl12|240756|kelch-like 12 (Drosophila)	BC034514|Klhl12|240756|kelch-like 12 (Drosophila)	NM_153128|Klhl12|240756|kelch-like 12 (Drosophila)
mm9_v1_chr8_-_27104573_27104612	0.0418696	CUCCCAA	BC027296|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK015374|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK032677|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK043620|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK170994|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	NM_029037|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK160873|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK036348|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK138952|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene
mm9_v1_chr2_+_32731648_32731777	0.0414844	CUCCCAA	NM_146119|Fam129b|227737|family with sequence similarity 129, member B	AK146953|Fam129b|227737|family with sequence similarity 129, member B	AK033735|Fam129b|227737|family with sequence similarity 129, member B	AK152207|Fam129b|227737|family with sequence similarity 129, member B	AK153489|Fam129b|227737|family with sequence similarity 129, member B	AK170512|Fam129b|227737|family with sequence similarity 129, member B	AK051396|Fam129b|227737|family with sequence similarity 129, member B	AK150642|Fam129b|227737|family with sequence similarity 129, member B	AK149818|Fam129b|227737|family with sequence similarity 129, member B	BC027843|Fam129b|227737|family with sequence similarity 129, member B	AK149888|Fam129b|227737|family with sequence similarity 129, member B	AK046583|Fam129b|227737|family with sequence similarity 129, member B
mm9_v1_chr17_+_73457324_73457400	0.0411529	CUCCCAA	NM_001081071|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177967|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177968|Lclat1|225010|lysocardiolipin acyltransferase 1	AK144580|Lclat1|225010|lysocardiolipin acyltransferase 1	BC147499|Lclat1|225010|lysocardiolipin acyltransferase 1	BC150884|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158076|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158079|Lclat1|225010|lysocardiolipin acyltransferase 1
mm9_v1_chr12_+_81619976_81620155	0.0411209	CUCCCAA	NM_001081421|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB045325|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK138883|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB175683|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
mm9_v1_chr11_-_58977197_58977301	0.0409879	CUCCCAA	AK172525|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	AK038625|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	AK133203|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	NM_173785|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	BC094909|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene
mm9_v1_chr11_+_68316520_68316601	0.0408013	CUCCCAA	NM_001004435|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	NM_001081566|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK169948|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK036623|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	BC028998|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK171063|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK151178|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK153039|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6
mm9_v1_chr11_-_97436439_97436456	0.0406889	CUCCCAA	AF040944|Srcin1|56013|SRC kinase signaling inhibitor 1	NM_018873|Srcin1|56013|SRC kinase signaling inhibitor 1	U59873|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr19_+_6046575_6046661	0.0406009	CUCCCAA	NM_028769|Syvn1|74126|synovial apoptosis inhibitor 1, synoviolin	BC057917|Syvn1|74126|synovial apoptosis inhibitor 1, synoviolin
mm9_v1_chr8_-_26895633_26895758	0.0404549	CUCCCAA	BC058518|Bag4|67384|BCL2-associated athanogene 4	AK162658|Bag4|67384|BCL2-associated athanogene 4	BC037239|Bag4|67384|BCL2-associated athanogene 4	AK010765|Bag4|67384|BCL2-associated athanogene 4	AK136899|Bag4|67384|BCL2-associated athanogene 4	AK160316|Bag4|67384|BCL2-associated athanogene 4	AF332863|Bag4|67384|BCL2-associated athanogene 4	NM_026121|Bag4|67384|BCL2-associated athanogene 4	BC138201|Bag4|67384|BCL2-associated athanogene 4	BC145986|Bag4|67384|BCL2-associated athanogene 4
mm9_v1_chr11_+_60541880_60542010	0.0400662	CUCCCAA	NM_001009927|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK156917|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK171444|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	BC088984|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)
mm9_v1_chr15_-_6824238_6824366	0.0400455	CUCCCAA	AK040020|Osmr|18414|oncostatin M receptor	AK087179|Osmr|18414|oncostatin M receptor	AF058805|Osmr|18414|oncostatin M receptor	NM_011019|Osmr|18414|oncostatin M receptor
mm9_v1_chr10_-_79850388_79850445	0.0397948	CUCCCAA	NM_198615|Mex3d|237400|mex3 homolog D (C. elegans)
mm9_v1_chr18_-_12394830_12394911	0.0397843	CUCCCAA	AK044878|Npc1|18145|Niemann Pick type C1	AK170880|Npc1|18145|Niemann Pick type C1	AK171371|Npc1|18145|Niemann Pick type C1	AK087174|Npc1|18145|Niemann Pick type C1	AF003348|Npc1|18145|Niemann Pick type C1	AK040367|Npc1|18145|Niemann Pick type C1	BC052437|Npc1|18145|Niemann Pick type C1	BC054539|Npc1|18145|Niemann Pick type C1	NM_008720|Npc1|18145|Niemann Pick type C1
mm9_v1_chr6_-_58974400_58974495	0.0396882	CUCCCAA	BC005554|Fam13a|58909|family with sequence similarity 13, member A	BC060978|Fam13a|58909|family with sequence similarity 13, member A	AK052421|Fam13a|58909|family with sequence similarity 13, member A	BC054053|Fam13a|58909|family with sequence similarity 13, member A	AJ510136|Fam13a|58909|family with sequence similarity 13, member A	AK054311|Fam13a|58909|family with sequence similarity 13, member A	BC080861|Fam13a|58909|family with sequence similarity 13, member A	NM_153574|Fam13a|58909|family with sequence similarity 13, member A
mm9_v1_chr8_+_87561055_87561132	0.0395134	CUCCCAA	NM_001122843|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	BC003275|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr9_+_56712850_56712966	0.0394051	CUCCCAA	NM_139001|Cspg4|121021|chondroitin sulfate proteoglycan 4	AF352400|Cspg4|121021|chondroitin sulfate proteoglycan 4
mm9_v1_chr11_-_6344445_6344467	0.0390441	CUCCCAA	NM_029938|H2afv|77605|H2A histone family, member V	AK155105|H2afv|77605|H2A histone family, member V
mm9_v1_chr2_-_92299870_92299954	0.0390067	CUCCCAA	AK144762|Slc35c1|228368|solute carrier family 35, member C1	AK138595|Slc35c1|228368|solute carrier family 35, member C1	AK151154|Slc35c1|228368|solute carrier family 35, member C1	NM_211358|Slc35c1|228368|solute carrier family 35, member C1
mm9_v1_chr14_+_71289933_71289944	0.0384486	CUCCCAA	AK138512|Gfra2|14586|glial cell line derived neurotrophic factor family receptor alpha 2	AK149349|Gfra2|14586|glial cell line derived neurotrophic factor family receptor alpha 2	NM_008115|Gfra2|14586|glial cell line derived neurotrophic factor family receptor alpha 2
mm9_v1_chr5_+_121262643_121262689	0.038271	CUCCCAA	AB067529|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF328926|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418004|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418005|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418006|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418007|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418008|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418009|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	NM_001083925|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AK080152|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	BC012877|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF466822|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF466823|Oas1b|23961|2'-5' oligoadenylate synthetase 1B
mm9_v1_chr6_-_28084368_28084420	0.0382631	CUCCCAA	BC051384|Grm8|14823|glutamate receptor, metabotropic 8	NM_008174|Grm8|14823|glutamate receptor, metabotropic 8	AK038395|Grm8|14823|glutamate receptor, metabotropic 8
mm9_v1_chr15_+_35301285_35301305	0.0379698	CUCCCAA	AK053274|Vps13b|666173|vacuolar protein sorting 13B (yeast)	NM_177151|Vps13b|666173|vacuolar protein sorting 13B (yeast)	AK049111|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr11_-_118280266_118280405	0.0379145	CUCCCAA	AK006565|Cant1|76025|calcium activated nucleotidase 1	AK166384|Cant1|76025|calcium activated nucleotidase 1	AK081118|Cant1|76025|calcium activated nucleotidase 1	AK017942|Cant1|76025|calcium activated nucleotidase 1	AK049879|Cant1|76025|calcium activated nucleotidase 1	NM_001025617|Cant1|76025|calcium activated nucleotidase 1	NM_001025618|Cant1|76025|calcium activated nucleotidase 1	NM_029502|Cant1|76025|calcium activated nucleotidase 1	AK085059|Cant1|76025|calcium activated nucleotidase 1
mm9_v1_chr10_-_52101880_52101956	0.0378804	CUCCCAA	BC051171|Gopc|94221|golgi associated PDZ and coiled-coil motif containing	NM_053187|Gopc|94221|golgi associated PDZ and coiled-coil motif containing	AK171881|Gopc|94221|golgi associated PDZ and coiled-coil motif containing
mm9_v1_chr6_-_39370351_39370385	0.0376455	CUCCCAA	BC003329|Mkrn1|54484|makorin, ring finger protein, 1	AK077060|Mkrn1|54484|makorin, ring finger protein, 1	NM_018810|Mkrn1|54484|makorin, ring finger protein, 1	AF192785|Mkrn1|54484|makorin, ring finger protein, 1
mm9_v1_chr2_+_156373311_156373449	0.0360911	CUCCCAA	NM_001164818|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	NM_026661|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK169526|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK018741|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK166203|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK028890|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	BC019988|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	BC020112|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK187905|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK201919|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene	AK210506|0610011L14Rik|68295|RIKEN cDNA 0610011L14 gene
mm9_v1_chrX_+_147778717_147778787	0.035786	CUCCCAA	AK030477|Fam120c|207375|family with sequence similarity 120, member C	AK086058|Fam120c|207375|family with sequence similarity 120, member C	AK156920|Fam120c|207375|family with sequence similarity 120, member C	AY150023|Fam120c|207375|family with sequence similarity 120, member C	AY150024|Fam120c|207375|family with sequence similarity 120, member C	BC137973|Fam120c|207375|family with sequence similarity 120, member C	BC171940|Fam120c|207375|family with sequence similarity 120, member C	NM_198105|Fam120c|207375|family with sequence similarity 120, member C	AK136727|Fam120c|207375|family with sequence similarity 120, member C	AK166381|Fam120c|207375|family with sequence similarity 120, member C
mm9_v1_chr17_+_6106829_6106853	0.0357502	CUCCCAA	NM_001103181|Tulp4|68842|tubby like protein 4
mm9_v1_chr10_-_89148966_89149057	0.0356768	CUCCCAA	AK052108|Scyl2|213326|SCY1-like 2 (S. cerevisiae)	AK139761|Scyl2|213326|SCY1-like 2 (S. cerevisiae)	AK167276|Scyl2|213326|SCY1-like 2 (S. cerevisiae)	BC042443|Scyl2|213326|SCY1-like 2 (S. cerevisiae)	NM_198021|Scyl2|213326|SCY1-like 2 (S. cerevisiae)
mm9_v1_chr7_+_108812146_108812327	0.035176	CUCCCAA	AK006072|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK138593|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK159314|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK154577|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK049768|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK028101|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK141383|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	U09874|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	BC048175|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	NM_009191|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK032421|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK145641|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)
mm9_v1_chr4_+_45354940_45354977	0.034966	CUCCCAA	AK170534|Dcaf10|242418|DDB1 and CUL4 associated factor 10	AK165246|Dcaf10|242418|DDB1 and CUL4 associated factor 10	NM_153167|Dcaf10|242418|DDB1 and CUL4 associated factor 10
mm9_v1_chr16_-_75766992_75767062	0.0349179	CUCCCAA	BC039701|Hspa13|110920|heat shock protein 70 family, member 13	AK167839|Hspa13|110920|heat shock protein 70 family, member 13	BC094508|Hspa13|110920|heat shock protein 70 family, member 13	BC085181|Hspa13|110920|heat shock protein 70 family, member 13	AK049011|Hspa13|110920|heat shock protein 70 family, member 13	AK021006|Hspa13|110920|heat shock protein 70 family, member 13	AK030553|Hspa13|110920|heat shock protein 70 family, member 13	AK034643|Hspa13|110920|heat shock protein 70 family, member 13	NM_030201|Hspa13|110920|heat shock protein 70 family, member 13
mm9_v1_chr1_-_63160764_63160840	0.0348439	CUCCCAA	AK049468|Ino80d|227195|INO80 complex subunit D	NM_001081436|Ino80d|227195|INO80 complex subunit D	NM_001114609|Ino80d|227195|INO80 complex subunit D
mm9_v1_chr8_-_48374755_48374779	0.0345407	CUCCCAA	AK053894|Stox2|71069|storkhead box 2	NM_001114311|Stox2|71069|storkhead box 2
mm9_v1_chr6_-_142912908_142912971	0.0342794	CUCCCAA	AK046188|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	BC024821|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	NM_011374|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
mm9_v1_chr15_+_75740152_75740190	0.0341436	CUCCCAA	AK051177|Tigd5|105734|tigger transposable element derived 5	BC099838|Tigd5|105734|tigger transposable element derived 5	NM_178646|Tigd5|105734|tigger transposable element derived 5	AK036241|Tigd5|105734|tigger transposable element derived 5	AK086663|Tigd5|105734|tigger transposable element derived 5	AK165093|Tigd5|105734|tigger transposable element derived 5	BC138289|Tigd5|105734|tigger transposable element derived 5
mm9_v1_chr10_+_75495352_75495380	0.0338382	CUCCCAA	NM_177475|Zfp280b|64453|zinc finger protein 280B
mm9_v1_chr17_+_43804373_43804482	0.0334316	CUCCCAA	AK031733|Cyp39a1|56050|cytochrome P450, family 39, subfamily a, polypeptide 1	NM_018887|Cyp39a1|56050|cytochrome P450, family 39, subfamily a, polypeptide 1	BC021418|Cyp39a1|56050|cytochrome P450, family 39, subfamily a, polypeptide 1	AF237981|Cyp39a1|56050|cytochrome P450, family 39, subfamily a, polypeptide 1	BC037663|Cyp39a1|56050|cytochrome P450, family 39, subfamily a, polypeptide 1
mm9_v1_chr19_-_4906607_4906628	0.0333701	CUCCCAA	AK037753|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	BC076577|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK161343|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK045850|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK168901|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	NM_001033128|Bbs1|52028|Bardet-Biedl syndrome 1 (human)
mm9_v1_chr5_+_118619772_118619918	0.0328076	CUCCCAA	BC128022|Hrk|12123|harakiri, BCL2 interacting protein (contains only BH3 domain)	D83698|Hrk|12123|harakiri, BCL2 interacting protein (contains only BH3 domain)	NM_007545|Hrk|12123|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm9_v1_chr12_+_34114475_34114519	0.03229	CUCCCAA	AK010829|Twistnb|28071|TWIST neighbor	NM_172253|Twistnb|28071|TWIST neighbor	AK016638|Twistnb|28071|TWIST neighbor	AK017016|Twistnb|28071|TWIST neighbor	AK153090|Twistnb|28071|TWIST neighbor	AK160682|Twistnb|28071|TWIST neighbor	BC139162|Twistnb|28071|TWIST neighbor	BC139163|Twistnb|28071|TWIST neighbor	AK017810|Twistnb|28071|TWIST neighbor	AK008677|Twistnb|28071|TWIST neighbor	BC082580|Twistnb|28071|TWIST neighbor
mm9_v1_chr17_-_56273265_56273275	0.0322056	CUCCCAA	AK166077|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	NM_013662|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
mm9_v1_chr8_+_23171187_23171223	0.0315251	CUCCCAA	NM_183142|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	AK157746|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	AK046475|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	BC061469|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	AK134312|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)
mm9_v1_chr17_-_79754427_79754441	0.0311106	CUCCCAA	AK014281|Cdc42ep3|260409|CDC42 effector protein (Rho GTPase binding) 3	AK019447|Cdc42ep3|260409|CDC42 effector protein (Rho GTPase binding) 3	NM_026514|Cdc42ep3|260409|CDC42 effector protein (Rho GTPase binding) 3
mm9_v1_chr2_-_118199046_118199154	0.0310392	CUCCCAA	BC052037|Gpr176|381413|G protein-coupled receptor 176	NM_201367|Gpr176|381413|G protein-coupled receptor 176
mm9_v1_chr15_-_66801198_66801204	0.0305857	CUCCCAA	AK170439|Ndrg1|17988|N-myc downstream regulated gene 1	AK004548|Ndrg1|17988|N-myc downstream regulated gene 1	AK098075|Ndrg1|17988|N-myc downstream regulated gene 1	AK161860|Ndrg1|17988|N-myc downstream regulated gene 1	AK165007|Ndrg1|17988|N-myc downstream regulated gene 1	AK170281|Ndrg1|17988|N-myc downstream regulated gene 1	AK170636|Ndrg1|17988|N-myc downstream regulated gene 1	U60593|Ndrg1|17988|N-myc downstream regulated gene 1	AK170809|Ndrg1|17988|N-myc downstream regulated gene 1	NM_008681|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr12_+_112812710_112812750	0.0305097	CUCCCAA	AK083683|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	NM_021516|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	NM_022801|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	AK166157|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	AK132247|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	BC066071|Mark3|17169|MAP/microtubule affinity-regulating kinase 3
mm9_v1_chr17_-_56857074_56857131	0.0303937	CUCCCAA	BC039944|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	BC058424|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	NM_001166474|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein
mm9_v1_chr7_-_29747285_29747394	0.0302734	CUCCCAA	AJ289242|Actn4|60595|actinin alpha 4	AK150044|Actn4|60595|actinin alpha 4	NM_021895|Actn4|60595|actinin alpha 4	BC013616|Actn4|60595|actinin alpha 4	AK145322|Actn4|60595|actinin alpha 4
mm9_v1_chrX_-_101396356_101396482	0.0300144	CUCCCAA	AK220439|C77370|245555|expressed sequence C77370	DQ975302|C77370|245555|expressed sequence C77370	DQ975303|C77370|245555|expressed sequence C77370	NM_001077354|C77370|245555|expressed sequence C77370	AK038635|C77370|245555|expressed sequence C77370
mm9_v1_chr11_-_29415005_29415037	0.0297212	CUCCCAA	BC033930|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	AK085965|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	AK019442|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	AK077280|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	AK008574|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	BC115900|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	NM_001163454|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	NM_026465|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1
mm9_v1_chrX_+_97170927_97171053	0.0295577	CUCCCAA	AK028502|Eda|13607|ectodysplasin-A	AF016627|Eda|13607|ectodysplasin-A	AF016628|Eda|13607|ectodysplasin-A	AF016629|Eda|13607|ectodysplasin-A	AF016630|Eda|13607|ectodysplasin-A	DQ168876|Eda|13607|ectodysplasin-A	DQ168877|Eda|13607|ectodysplasin-A	DQ168878|Eda|13607|ectodysplasin-A	DQ168879|Eda|13607|ectodysplasin-A	DQ168880|Eda|13607|ectodysplasin-A	DQ168881|Eda|13607|ectodysplasin-A	NM_001177937|Eda|13607|ectodysplasin-A	NM_001177938|Eda|13607|ectodysplasin-A	NM_001177939|Eda|13607|ectodysplasin-A	NM_001177940|Eda|13607|ectodysplasin-A	NM_001177941|Eda|13607|ectodysplasin-A	NM_001177942|Eda|13607|ectodysplasin-A	NM_001177943|Eda|13607|ectodysplasin-A	NM_001177944|Eda|13607|ectodysplasin-A	NM_010099|Eda|13607|ectodysplasin-A	AF016631|Eda|13607|ectodysplasin-A	AJ243657|Eda|13607|ectodysplasin-A	AK040754|Eda|13607|ectodysplasin-A	AF004435|Eda|13607|ectodysplasin-A	AJ243658|Eda|13607|ectodysplasin-A	AK137551|Eda|13607|ectodysplasin-A	BC125387|Eda|13607|ectodysplasin-A	BC144790|Eda|13607|ectodysplasin-A	BC144791|Eda|13607|ectodysplasin-A
mm9_v1_chr15_-_34608458_34608547	0.029346	CUCCCAA	AK033975|Nipal2|223473|NIPA-like domain containing 2	NM_145469|Nipal2|223473|NIPA-like domain containing 2	BC016107|Nipal2|223473|NIPA-like domain containing 2	AK132530|Nipal2|223473|NIPA-like domain containing 2	AK087325|Nipal2|223473|NIPA-like domain containing 2
mm9_v1_chr3_-_94590356_94590436	0.0293205	CUCCCAA	BC052941|Cgn|70737|cingulin	AK018143|Cgn|70737|cingulin	BC108378|Cgn|70737|cingulin	BC042459|Cgn|70737|cingulin	BC064474|Cgn|70737|cingulin	BC087546|Cgn|70737|cingulin	AK173148|Cgn|70737|cingulin	NM_001037711|Cgn|70737|cingulin
mm9_v1_chr17_-_81127339_81127433	0.0292719	CUCCCAA	AK014711|Map4k3|225028|mitogen-activated protein kinase kinase kinase kinase 3	NM_001081357|Map4k3|225028|mitogen-activated protein kinase kinase kinase kinase 3
mm9_v1_chr11_+_119352933_119353046	0.0292546	CUCCCAA	NM_177394|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK170595|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK172181|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	BC056486|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK042626|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene
mm9_v1_chr2_-_180377395_180377395	0.0289566	CUCCCAA	BC108399|Tcfl5|277353|transcription factor-like 5 (basic helix-loop-helix)	NM_178254|Tcfl5|277353|transcription factor-like 5 (basic helix-loop-helix)
mm9_v1_chr16_+_35155621_35155721	0.0281529	CUCCCAA	AK147590|Adcy5|224129|adenylate cyclase 5	AK160942|Adcy5|224129|adenylate cyclase 5	NM_001012765|Adcy5|224129|adenylate cyclase 5
mm9_v1_chrX_+_7455387_7455511	0.0281266	CUCCCAA	AK043570|Pim2|18715|proviral integration site 2	L41495|Pim2|18715|proviral integration site 2	NM_138606|Pim2|18715|proviral integration site 2	BC027376|Pim2|18715|proviral integration site 2
mm9_v1_chr6_-_3713622_3713622	0.0279435	CUCCCAA	AK133983|Calcr|12311|calcitonin receptor	NM_001042725|Calcr|12311|calcitonin receptor
mm9_v1_chr2_-_35992076_35992223	0.0278325	CUCCCAA	AK008110|Rbm18|67889|RNA binding motif protein 18	AK021243|Rbm18|67889|RNA binding motif protein 18	AK036252|Rbm18|67889|RNA binding motif protein 18	BC005540|Rbm18|67889|RNA binding motif protein 18	AK035348|Rbm18|67889|RNA binding motif protein 18	AK036220|Rbm18|67889|RNA binding motif protein 18	AK135109|Rbm18|67889|RNA binding motif protein 18	NM_001159635|Rbm18|67889|RNA binding motif protein 18	NM_026434|Rbm18|67889|RNA binding motif protein 18
mm9_v1_chr5_+_28643698_28643741	0.0277749	CUCCCAA	NM_028234|Rbm33|381626|RNA binding motif protein 33	AK014289|Rbm33|381626|RNA binding motif protein 33
mm9_v1_chr6_+_34813131_34813171	0.0274856	CUCCCAA	AK030532|Tmem140|68487|transmembrane protein 140	AK165621|Tmem140|68487|transmembrane protein 140	NM_197986|Tmem140|68487|transmembrane protein 140	BC023802|Tmem140|68487|transmembrane protein 140
mm9_v1_chr5_+_118695228_118695301	0.0274115	CUCCCAA	NM_001081236|2410131K14Rik|76792|RIKEN cDNA 2410131K14 gene	AK090380|2410131K14Rik|76792|RIKEN cDNA 2410131K14 gene	BC104372|2410131K14Rik|76792|RIKEN cDNA 2410131K14 gene	BC104373|2410131K14Rik|76792|RIKEN cDNA 2410131K14 gene
mm9_v1_chr5_+_136293975_136293975	0.0269936	CUCCCAA	BC058385|Srrm3|58212|serine/arginine repetitive matrix 3	NM_021403|Srrm3|58212|serine/arginine repetitive matrix 3
mm9_v1_chr10_+_127707555_127707756	0.0269541	CUCCCAA	AK149924|Stat2|20847|signal transducer and activator of transcription 2	AK150070|Stat2|20847|signal transducer and activator of transcription 2	AK149838|Stat2|20847|signal transducer and activator of transcription 2	AF187231|Stat2|20847|signal transducer and activator of transcription 2	AF206162|Stat2|20847|signal transducer and activator of transcription 2	NM_019963|Stat2|20847|signal transducer and activator of transcription 2	AF088862|Stat2|20847|signal transducer and activator of transcription 2
mm9_v1_chr19_+_56948738_56948999	0.0267059	CUCCCAA	AK145058|Vwa2|240675|von Willebrand factor A domain containing 2	AK166339|Vwa2|240675|von Willebrand factor A domain containing 2	AK160971|Vwa2|240675|von Willebrand factor A domain containing 2	AJ536329|Vwa2|240675|von Willebrand factor A domain containing 2	NM_172840|Vwa2|240675|von Willebrand factor A domain containing 2	BC116636|Vwa2|240675|von Willebrand factor A domain containing 2	BC115868|Vwa2|240675|von Willebrand factor A domain containing 2	AK029297|Vwa2|240675|von Willebrand factor A domain containing 2	AK133486|Vwa2|240675|von Willebrand factor A domain containing 2
mm9_v1_chrX_-_34529689_34529693	0.0265828	CUCCCAA	NM_001177324|Sept6|56526|septin 6	NM_019942|Sept6|56526|septin 6
mm9_v1_chr9_+_107199019_107199063	0.0263974	CUCCCAA	AK077338|Cish|12700|cytokine inducible SH2-containing protein	NM_009895|Cish|12700|cytokine inducible SH2-containing protein
mm9_v1_chr2_+_181572558_181572632	0.026233	CUCCCAA	AK031335|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	BC040385|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	NM_153594|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AK146080|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AB182640|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	AK088800|Pcmtd2|245867|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
mm9_v1_chr6_+_86145220_86145449	0.0262109	CUCCCAA	AK010785|Tgfa|21802|transforming growth factor alpha	AK165017|Tgfa|21802|transforming growth factor alpha	NM_031199|Tgfa|21802|transforming growth factor alpha	AK166321|Tgfa|21802|transforming growth factor alpha	U65016|Tgfa|21802|transforming growth factor alpha	BC132185|Tgfa|21802|transforming growth factor alpha	BC132211|Tgfa|21802|transforming growth factor alpha
mm9_v1_chr4_-_126210701_126210715	0.0258021	CUCCCAA	NM_153177|Eif2c4|76850|eukaryotic translation initiation factor 2C, 4	AK030018|Eif2c4|76850|eukaryotic translation initiation factor 2C, 4
mm9_v1_chr11_-_100683830_100683883	0.0256729	CUCCCAA	AY040231|Stat5b|20851|signal transducer and activator of transcription 5B	AY042906|Stat5b|20851|signal transducer and activator of transcription 5B	AY044901|Stat5b|20851|signal transducer and activator of transcription 5B	AY044902|Stat5b|20851|signal transducer and activator of transcription 5B	AY044903|Stat5b|20851|signal transducer and activator of transcription 5B	U21110|Stat5b|20851|signal transducer and activator of transcription 5B	AK088966|Stat5b|20851|signal transducer and activator of transcription 5B	AK154014|Stat5b|20851|signal transducer and activator of transcription 5B	NM_011489|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr7_-_4817767_4817818	0.0254722	CUCCCAA	BC049278|Isoc2b|67441|isochorismatase domain containing 2b	AK002905|Isoc2b|67441|isochorismatase domain containing 2b	NM_026158|Isoc2b|67441|isochorismatase domain containing 2b
mm9_v1_chr11_-_106077657_106077682	0.0253336	CUCCCAA	AB040489|Ccdc47|67163|coiled-coil domain containing 47	AK078812|Ccdc47|67163|coiled-coil domain containing 47	NM_026009|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr11_-_61743706_61743758	0.0242961	CUCCCAA	AK049399|Akap10|56697|A kinase (PRKA) anchor protein 10	AK083255|Akap10|56697|A kinase (PRKA) anchor protein 10	NM_019921|Akap10|56697|A kinase (PRKA) anchor protein 10	AK162966|Akap10|56697|A kinase (PRKA) anchor protein 10
mm9_v1_chr13_+_25147872_25147872	0.024017	CUCCCAA	BC045136|Dcdc2a|195208|doublecortin domain containing 2a	NM_001195617|Dcdc2a|195208|doublecortin domain containing 2a	NM_177577|Dcdc2a|195208|doublecortin domain containing 2a
mm9_v1_chr1_+_120524521_120524530	0.0239843	CUCCCAA	AK007654|Tcfcp2l1|81879|transcription factor CP2-like 1	NM_023755|Tcfcp2l1|81879|transcription factor CP2-like 1	AK143960|Tcfcp2l1|81879|transcription factor CP2-like 1	AF311309|Tcfcp2l1|81879|transcription factor CP2-like 1	BC116663|Tcfcp2l1|81879|transcription factor CP2-like 1
mm9_v1_chr5_+_110564841_110564902	0.0239483	CUCCCAA	NM_172717|Chfr|231600|checkpoint with forkhead and ring finger domains	AK039281|Chfr|231600|checkpoint with forkhead and ring finger domains	AK133154|Chfr|231600|checkpoint with forkhead and ring finger domains	AK154038|Chfr|231600|checkpoint with forkhead and ring finger domains	AK048930|Chfr|231600|checkpoint with forkhead and ring finger domains	AK147892|Chfr|231600|checkpoint with forkhead and ring finger domains	AK077629|Chfr|231600|checkpoint with forkhead and ring finger domains	AK148436|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155295|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155525|Chfr|231600|checkpoint with forkhead and ring finger domains	AK052473|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169193|Chfr|231600|checkpoint with forkhead and ring finger domains	BC049792|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169182|Chfr|231600|checkpoint with forkhead and ring finger domains
mm9_v1_chr8_-_28524173_28524415	0.0239466	CUCCCAA	AY574265|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AJ245706|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AK149262|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	BC031985|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	NM_021369|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6
mm9_v1_chr17_+_35068184_35068197	0.0232225	CUCCCAA	NM_010893|Neu1|18010|neuraminidase 1
mm9_v1_chr14_-_63379948_63379993	0.0229633	CUCCCAA	BC059263|Ints6|18130|integrator complex subunit 6	NM_008715|Ints6|18130|integrator complex subunit 6	BC058637|Ints6|18130|integrator complex subunit 6	AK053385|Ints6|18130|integrator complex subunit 6	AK149711|Ints6|18130|integrator complex subunit 6	AK172178|Ints6|18130|integrator complex subunit 6
mm9_v1_chr11_-_121249511_121249580	0.0227017	CUCCCAA	BC096601|Rab40b|217371|Rab40b, member RAS oncogene family	NM_139147|Rab40b|217371|Rab40b, member RAS oncogene family
mm9_v1_chr10_+_80820218_80820329	0.0226822	CUCCCAA	AK154902|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK170185|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK149678|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK154386|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK171084|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	BC118620|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	BC119790|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	NM_028657|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene
mm9_v1_chr12_-_4914313_4914463	0.0225552	CUCCCAA	AK031821|Ubxn2a|217379|UBX domain protein 2A	NM_145441|Ubxn2a|217379|UBX domain protein 2A	AK134666|Ubxn2a|217379|UBX domain protein 2A	AK041556|Ubxn2a|217379|UBX domain protein 2A	AK161940|Ubxn2a|217379|UBX domain protein 2A
mm9_v1_chr4_+_48292631_48292673	0.0222043	CUCCCAA	AK040307|Invs|16348|inversin	AK019896|Invs|16348|inversin	AK158766|Invs|16348|inversin	NM_010569|Invs|16348|inversin
mm9_v1_chr4_-_45421590_45421646	0.0216195	CUCCCAA	AK150362|Mcart1|230125|mitochondrial carrier triple repeat 1	AK151688|Mcart1|230125|mitochondrial carrier triple repeat 1	AK152171|Mcart1|230125|mitochondrial carrier triple repeat 1	AK156168|Mcart1|230125|mitochondrial carrier triple repeat 1	AK156342|Mcart1|230125|mitochondrial carrier triple repeat 1	AK146788|Mcart1|230125|mitochondrial carrier triple repeat 1	AK020275|Mcart1|230125|mitochondrial carrier triple repeat 1	AK164726|Mcart1|230125|mitochondrial carrier triple repeat 1	AK172225|Mcart1|230125|mitochondrial carrier triple repeat 1	AK051139|Mcart1|230125|mitochondrial carrier triple repeat 1	AK165253|Mcart1|230125|mitochondrial carrier triple repeat 1	NM_001009949|Mcart1|230125|mitochondrial carrier triple repeat 1
mm9_v1_chr1_+_154802198_154802230	0.0215759	CUCCCAA	BC089007|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	NM_175460|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr9_+_102620096_102620187	0.0214601	CUCCCAA	AK141348|Amotl2|56332|angiomotin-like 2	AK164819|Amotl2|56332|angiomotin-like 2	NM_019764|Amotl2|56332|angiomotin-like 2	AK077535|Amotl2|56332|angiomotin-like 2	AK169419|Amotl2|56332|angiomotin-like 2	BC035201|Amotl2|56332|angiomotin-like 2	BC027824|Amotl2|56332|angiomotin-like 2
mm9_v1_chr3_-_126646303_126646303	0.0207359	CUCCCAA	BC043123|Ank2|109676|ankyrin 2, brain	NM_001034168|Ank2|109676|ankyrin 2, brain
mm9_v1_chr16_+_8830175_8830249	0.0206958	CUCCCAA	AK007485|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene	NM_001081400|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene	BC116778|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene	BC116780|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene
mm9_v1_chr7_-_150970404_150970404	0.0202686	CUCCCAA	AK133657|Mrgpre|244238|MAS-related GPR, member E	NM_175534|Mrgpre|244238|MAS-related GPR, member E
mm9_v1_chr2_+_152987036_152987075	0.0202465	CUCCCAA	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr3_+_94641479_94641499	0.0200222	CUCCCAA	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr1_-_182413583_182413634	0.0198725	CUCCCAA	AK031805|6330403A02Rik|381310|RIKEN cDNA 6330403A02 gene	NM_001081227|6330403A02Rik|381310|RIKEN cDNA 6330403A02 gene
mm9_v1_chr13_+_73674194_73674271	0.0197941	CUCCCAA	BC054119|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	NM_010020|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK032629|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK136885|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	U16265|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AF109072|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3
mm9_v1_chr1_+_65233222_65233323	0.0197229	CUCCCAA	AK139116|Pikfyve|18711|phosphoinositide kinase, FYVE finger containing	NM_011086|Pikfyve|18711|phosphoinositide kinase, FYVE finger containing	AK165350|Pikfyve|18711|phosphoinositide kinase, FYVE finger containing	AK080527|Pikfyve|18711|phosphoinositide kinase, FYVE finger containing	AF102777|Pikfyve|18711|phosphoinositide kinase, FYVE finger containing	AK143565|Pikfyve|18711|phosphoinositide kinase, FYVE finger containing	AK173077|Pikfyve|18711|phosphoinositide kinase, FYVE finger containing
mm9_v1_chr2_+_163428044_163428072	0.0196341	CUCCCAA	AK039450|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_029512|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_181734|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chrX_-_49034778_49034778	0.0192963	CUCCCAA	NM_001077202|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr7_-_105326687_105326735	0.0192477	CUCCCAA	AK164293|Capn5|12337|calpain 5	NM_007602|Capn5|12337|calpain 5	U85020|Capn5|12337|calpain 5	Y10656|Capn5|12337|calpain 5	AK170034|Capn5|12337|calpain 5
mm9_v1_chr11_+_75401554_75401692	0.0191941	CUCCCAA	AK144618|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152089|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK153569|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK167760|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152874|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK165659|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168720|Pitpna|18738|phosphatidylinositol transfer protein, alpha	U96725|Pitpna|18738|phosphatidylinositol transfer protein, alpha	NM_008850|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK149745|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK151496|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168187|Pitpna|18738|phosphatidylinositol transfer protein, alpha	BC056171|Pitpna|18738|phosphatidylinositol transfer protein, alpha
mm9_v1_chr14_+_52604434_52604640	0.0191702	CUCCCAA	AK163945|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	NM_001145921|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	NM_001145922|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	NM_198249|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK134295|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK143527|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK131136|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK147761|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK053592|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	BC059018|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK202688|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK155659|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40
mm9_v1_chr1_+_4847774_4847928	0.0183405	CUCCCAA	NM_001159750|Tcea1|21399|transcription elongation factor A (SII) 1	NM_011541|Tcea1|21399|transcription elongation factor A (SII) 1	AK136035|Tcea1|21399|transcription elongation factor A (SII) 1	BC061490|Tcea1|21399|transcription elongation factor A (SII) 1	BC006022|Tcea1|21399|transcription elongation factor A (SII) 1	BC083127|Tcea1|21399|transcription elongation factor A (SII) 1	AK143593|Tcea1|21399|transcription elongation factor A (SII) 1
mm9_v1_chr11_+_103510822_103510829	0.0181509	CUCCCAA	AK141598|Rprml|104582|reprimo-like	NM_001033212|Rprml|104582|reprimo-like
mm9_v1_chr16_-_14291427_14291500	0.018104	CUCCCAA	S81516|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	L25860|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	AK137226|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	D85923|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	D85924|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	AK137716|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	AK085742|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	AK173045|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	NM_001161775|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle	NM_013607|Myh11|17880|myosin, heavy polypeptide 11, smooth muscle
mm9_v1_chr17_+_35263978_35264059	0.0181019	CUCCCAA	BC138707|D17H6S53E|114585|DNA segment, Chr 17, human D6S53E	BC138708|D17H6S53E|114585|DNA segment, Chr 17, human D6S53E	NM_033477|D17H6S53E|114585|DNA segment, Chr 17, human D6S53E
mm9_v1_chr9_+_43851466_43851476	0.0176371	CUCCCAA	NM_009382|Thy1|21838|thymus cell antigen 1, theta
mm9_v1_chr1_+_78813482_78813523	0.0175818	CUCCCAA	AK133469|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	BC032920|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	BC034849|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	AF076533|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	NM_021342|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4
mm9_v1_chr11_-_94565812_94565812	0.0175717	CUCCCAA	AK082500|Gm11541|432589|predicted gene 11541	BC147833|Gm11541|432589|predicted gene 11541	BC147838|Gm11541|432589|predicted gene 11541	NM_001007584|Gm11541|432589|predicted gene 11541
mm9_v1_chr11_+_100406921_100407015	0.0173144	CUCCCAA	BC050805|Ttc25|74407|tetratricopeptide repeat domain 25	NM_028918|Ttc25|74407|tetratricopeptide repeat domain 25	AK161541|Ttc25|74407|tetratricopeptide repeat domain 25	AK162855|Ttc25|74407|tetratricopeptide repeat domain 25	AK016657|Ttc25|74407|tetratricopeptide repeat domain 25
mm9_v1_chr7_+_58766387_58766476	0.0170731	CUCCCAA	AK038750|Ano5|233246|anoctamin 5	AB125740|Ano5|233246|anoctamin 5	AB206762|Ano5|233246|anoctamin 5	NM_177694|Ano5|233246|anoctamin 5	AK034197|Ano5|233246|anoctamin 5	BC109163|Ano5|233246|anoctamin 5
mm9_v1_chr10_-_105011439_105011534	0.0170038	CUCCCAA	BC092226|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK052344|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK135552|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	NM_177368|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chr8_-_75016484_75016582	0.0169569	CUCCCAA	NM_177766|Slc35e1|270066|solute carrier family 35, member E1
mm9_v1_chr18_+_36838868_36838897	0.0168636	CUCCCAA	NM_001083317|Slc35a4|67843|solute carrier family 35, member A4	NM_026404|Slc35a4|67843|solute carrier family 35, member A4
mm9_v1_chr18_-_34879873_34880040	0.0166306	CUCCCAA	AF020305|Gfra3|14587|glial cell line derived neurotrophic factor family receptor alpha 3	AB008833|Gfra3|14587|glial cell line derived neurotrophic factor family receptor alpha 3	AF041842|Gfra3|14587|glial cell line derived neurotrophic factor family receptor alpha 3	AF036163|Gfra3|14587|glial cell line derived neurotrophic factor family receptor alpha 3	AF051766|Gfra3|14587|glial cell line derived neurotrophic factor family receptor alpha 3	Y15110|Gfra3|14587|glial cell line derived neurotrophic factor family receptor alpha 3	AK046542|Gfra3|14587|glial cell line derived neurotrophic factor family receptor alpha 3	BC066202|Gfra3|14587|glial cell line derived neurotrophic factor family receptor alpha 3	NM_010280|Gfra3|14587|glial cell line derived neurotrophic factor family receptor alpha 3
mm9_v1_chr17_-_13133166_13133267	0.0160739	CUCCCAA	BC049873|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3	AK143884|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3	AK149441|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3	NM_153151|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3	AF356876|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3
mm9_v1_chr4_-_141161882_141162024	0.01595	CUCCCAA	AK170440|Fblim1|74202|filamin binding LIM protein 1	AK154680|Fblim1|74202|filamin binding LIM protein 1	AK163587|Fblim1|74202|filamin binding LIM protein 1	AK170151|Fblim1|74202|filamin binding LIM protein 1	NM_133754|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr1_-_59727541_59727679	0.0158273	CUCCCAA	AK089081|Sumo1|22218|SMT3 suppressor of mif two 3 homolog 1 (yeast)	AK159366|Sumo1|22218|SMT3 suppressor of mif two 3 homolog 1 (yeast)	AK002536|Sumo1|22218|SMT3 suppressor of mif two 3 homolog 1 (yeast)	AK011074|Sumo1|22218|SMT3 suppressor of mif two 3 homolog 1 (yeast)	BC083158|Sumo1|22218|SMT3 suppressor of mif two 3 homolog 1 (yeast)	AF033353|Sumo1|22218|SMT3 suppressor of mif two 3 homolog 1 (yeast)	BC082566|Sumo1|22218|SMT3 suppressor of mif two 3 homolog 1 (yeast)	AK012235|Sumo1|22218|SMT3 suppressor of mif two 3 homolog 1 (yeast)	NM_009460|Sumo1|22218|SMT3 suppressor of mif two 3 homolog 1 (yeast)
mm9_v1_chr2_+_28496752_28496773	0.015467	CUCCCAA	AK030318|Tsc1|64930|tuberous sclerosis 1	AJ271912|Tsc1|64930|tuberous sclerosis 1	AK147428|Tsc1|64930|tuberous sclerosis 1	NM_022887|Tsc1|64930|tuberous sclerosis 1	AK083363|Tsc1|64930|tuberous sclerosis 1	AK078140|Tsc1|64930|tuberous sclerosis 1	AK154416|Tsc1|64930|tuberous sclerosis 1
mm9_v1_chr8_-_26212242_26212282	0.0154355	CUCCCAA	AK042324|Plekha2|83436|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2	AK078212|Plekha2|83436|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2	NM_031257|Plekha2|83436|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
mm9_v1_chr2_-_121176719_121176752	0.0154323	CUCCCAA	AK122264|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	AK083140|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	NM_178795|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	BC065138|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	AF502585|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1
mm9_v1_chr17_-_59152686_59152744	0.0153058	CUCCCAA	BC057657|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK147867|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK083846|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK002641|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	NM_026497|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12
mm9_v1_chr8_+_107800316_107800347	0.0153058	CUCCCAA	AK079536|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	BC027290|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AY459322|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AK053846|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	NM_030152|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm9_v1_chr2_-_69424085_69424123	0.0152188	CUCCCAA	AK049346|Lrp2|14725|low density lipoprotein receptor-related protein 2	AK084165|Lrp2|14725|low density lipoprotein receptor-related protein 2	AK165434|Lrp2|14725|low density lipoprotein receptor-related protein 2	NM_001081088|Lrp2|14725|low density lipoprotein receptor-related protein 2
mm9_v1_chr10_-_114622068_114622080	0.0151401	CUCCCAA	BC120514|Tph2|216343|tryptophan hydroxylase 2	BC125430|Tph2|216343|tryptophan hydroxylase 2	AY090565|Tph2|216343|tryptophan hydroxylase 2	NM_173391|Tph2|216343|tryptophan hydroxylase 2
mm9_v1_chr12_+_50483869_50483993	0.0150529	CUCCCAA	AK132305|Foxg1|15228|forkhead box G1	NM_001160112|Foxg1|15228|forkhead box G1	NM_008241|Foxg1|15228|forkhead box G1	U36760|Foxg1|15228|forkhead box G1
mm9_v1_chr1_+_107886982_107886982	0.014812	CUCCCAA	AK046562|Zcchc2|227449|zinc finger, CCHC domain containing 2	NM_001122675|Zcchc2|227449|zinc finger, CCHC domain containing 2	NM_001122676|Zcchc2|227449|zinc finger, CCHC domain containing 2
mm9_v1_chr7_+_94732677_94732677	0.0145193	CUCCCAA	NM_001081414|Grm5|108071|glutamate receptor, metabotropic 5	NM_001143834|Grm5|108071|glutamate receptor, metabotropic 5
mm9_v1_chr11_-_97561808_97561839	0.0144171	CUCCCAA	NM_009545|Pcgf2|22658|polycomb group ring finger 2
mm9_v1_chr6_+_135312948_135312972	0.0143873	CUCCCAA	BC046299|Emp1|13730|epithelial membrane protein 1	NM_010128|Emp1|13730|epithelial membrane protein 1	X98403|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr6_-_48036561_48036593	0.0141026	CUCCCAA	AK156312|Zfp746|69228|zinc finger protein 746	NM_001163475|Zfp746|69228|zinc finger protein 746
mm9_v1_chr19_+_11011649_11011669	0.013865	CUCCCAA	AB109092|Gpr44|14764|G protein-coupled receptor 44	NM_009962|Gpr44|14764|G protein-coupled receptor 44	AK041947|Gpr44|14764|G protein-coupled receptor 44	BC111906|Gpr44|14764|G protein-coupled receptor 44
mm9_v1_chr11_+_70246079_70246238	0.0137325	CUCCCAA	AK150389|Arrb2|216869|arrestin, beta 2	AK170647|Arrb2|216869|arrestin, beta 2	AK089542|Arrb2|216869|arrestin, beta 2	AK162889|Arrb2|216869|arrestin, beta 2	AK159317|Arrb2|216869|arrestin, beta 2	NM_145429|Arrb2|216869|arrestin, beta 2	AK154874|Arrb2|216869|arrestin, beta 2	AK170889|Arrb2|216869|arrestin, beta 2	BC016642|Arrb2|216869|arrestin, beta 2
mm9_v1_chr11_+_114751354_114751532	0.0135686	CUCCCAA	AK045869|Cd300a|217303|CD300A antigen	NM_170758|Cd300a|217303|CD300A antigen	BC139296|Cd300a|217303|CD300A antigen	BC139297|Cd300a|217303|CD300A antigen	AB095675|Cd300a|217303|CD300A antigen
mm9_v1_chr15_+_87455659_87455659	0.0134853	CUCCCAA	AY325124|Fam19a5|106014|family with sequence similarity 19, member A5	BC015306|Fam19a5|106014|family with sequence similarity 19, member A5	NM_134096|Fam19a5|106014|family with sequence similarity 19, member A5
mm9_v1_chr17_-_36179615_36179686	0.0130195	CUCCCAA	M35243|H2-T22|15039|histocompatibility 2, T region locus 22	M35247|H2-T22|15039|histocompatibility 2, T region locus 22	BC003819|H2-T22|15039|histocompatibility 2, T region locus 22	M35248|H2-T9|15051|histocompatibility 2, T region locus 9	NM_010399|H2-T9|15051|histocompatibility 2, T region locus 9	AK161744|H2-T22|15039|histocompatibility 2, T region locus 22	M35245|H2-T22|15039|histocompatibility 2, T region locus 22	NM_010397|H2-T22|15039|histocompatibility 2, T region locus 22	AK162874|H2-T22|15039|histocompatibility 2, T region locus 22	AK133985|H2-T22|15039|histocompatibility 2, T region locus 22
mm9_v1_chr7_+_4971977_4971977	0.0123464	CUCCCAA	AK154737|Zfp865|319748|zinc finger protein 865	NM_001033383|Zfp865|319748|zinc finger protein 865
mm9_v1_chr3_-_87552469_87552546	0.0121599	CUCCCAA	AK016993|4933430H15Rik|74485|RIKEN cDNA 4933430H15 gene	AK029938|4933430H15Rik|74485|RIKEN cDNA 4933430H15 gene	NM_028971|4933430H15Rik|74485|RIKEN cDNA 4933430H15 gene
mm9_v1_chr2_+_152857587_152857587	0.0121051	CUCCCAA	AY534253|Xkr7|228787|X Kell blood group precursor related family member 7 homolog	NM_001011732|Xkr7|228787|X Kell blood group precursor related family member 7 homolog
mm9_v1_chrX_+_63902456_63902492	0.0118229	CUCCCAA	NM_001161431|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr5_-_135090819_135090917	0.0117298	CUCCCAA	BC005804|Lat2|56743|linker for activation of T cells family, member 2	AK144261|Lat2|56743|linker for activation of T cells family, member 2	AK138953|Lat2|56743|linker for activation of T cells family, member 2	AK162321|Lat2|56743|linker for activation of T cells family, member 2	AY190024|Lat2|56743|linker for activation of T cells family, member 2	NM_020044|Lat2|56743|linker for activation of T cells family, member 2	NM_022964|Lat2|56743|linker for activation of T cells family, member 2	AK143533|Lat2|56743|linker for activation of T cells family, member 2
mm9_v1_chr4_+_43591606_43591606	0.0112018	CUCCCAA	NM_172866|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)
mm9_v1_chr11_+_54911540_54911679	0.011086	CUCCCAA	AK149642|Gm2a|14667|GM2 ganglioside activator protein	AK152256|Gm2a|14667|GM2 ganglioside activator protein	U09816|Gm2a|14667|GM2 ganglioside activator protein	BC004651|Gm2a|14667|GM2 ganglioside activator protein	NM_010299|Gm2a|14667|GM2 ganglioside activator protein	L19526|Gm2a|14667|GM2 ganglioside activator protein	CT010289|Gm2a|14667|GM2 ganglioside activator protein	AK179394|Gm2a|14667|GM2 ganglioside activator protein	AK181597|Gm2a|14667|GM2 ganglioside activator protein
mm9_v1_chr12_-_33777667_33777744	0.0108322	CUCCCAA	BC138911|Cdhr3|68764|cadherin-related family member 3	AK047666|Cdhr3|68764|cadherin-related family member 3	AK049806|Cdhr3|68764|cadherin-related family member 3	NM_001024478|Cdhr3|68764|cadherin-related family member 3
mm9_v1_chr19_+_4594318_4594387	0.0107772	CUCCCAA	NM_008797|Pcx|18563|pyruvate carboxylase	L09192|Pcx|18563|pyruvate carboxylase
mm9_v1_chr11_-_48630854_48630892	0.0106686	CUCCCAA	BC041780|Trim41|211007|tripartite motif-containing 41	BC031905|Trim41|211007|tripartite motif-containing 41	NM_145377|Trim41|211007|tripartite motif-containing 41
mm9_v1_chr14_+_73542316_73542336	0.0105768	CUCCCAA	NM_001170694|Rcbtb2|105670|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	NM_134083|Rcbtb2|105670|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm9_v1_chr3_-_89568552_89568566	0.0101188	CUCCCAA	NM_009602|Chrnb2|11444|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
mm9_v1_chr2_+_74513069_74513131	0.0100334	CUCCCAA	BC145656|Hoxd12|15432|homeobox D12	NM_008274|Hoxd12|15432|homeobox D12	AK031206|Hoxd12|15432|homeobox D12
mm9_v1_chr9_+_51021793_51021824	0.00972223	CUCCCAA	Z54283|Pou2af1|18985|POU domain, class 2, associating factor 1	NM_011136|Pou2af1|18985|POU domain, class 2, associating factor 1	U43788|Pou2af1|18985|POU domain, class 2, associating factor 1	AK088587|Pou2af1|18985|POU domain, class 2, associating factor 1	AK135080|Pou2af1|18985|POU domain, class 2, associating factor 1	BC058611|Pou2af1|18985|POU domain, class 2, associating factor 1
mm9_v1_chr7_-_36539369_36539472	0.00968591	CUCCCAA	BC059897|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK045758|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK031722|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	BC050065|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK033395|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AF538322|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK031345|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK034217|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	NM_178704|Dpy19l3|233115|dpy-19-like 3 (C. elegans)
mm9_v1_chr1_-_134539434_134539434	0.00933732	CUCCCAA	NM_001160316|Nfasc|269116|neurofascin
mm9_v1_chr11_-_115992196_115992441	0.00933346	CUCCCAA	BC118954|Trim65|338364|tripartite motif-containing 65	BC118955|Trim65|338364|tripartite motif-containing 65	AK028857|Trim65|338364|tripartite motif-containing 65	BC057094|Trim65|338364|tripartite motif-containing 65	AK050080|Trim65|338364|tripartite motif-containing 65	AK047439|Trim65|338364|tripartite motif-containing 65	AK079982|Trim65|338364|tripartite motif-containing 65	NM_178802|Trim65|338364|tripartite motif-containing 65
mm9_v1_chr15_+_79501284_79501317	0.00916949	CUCCCAA	AK008133|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK009868|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	NM_172609|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150787|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK013471|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK049442|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150360|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK152843|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK167803|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	BC056920|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)
mm9_v1_chr2_+_28980511_28980658	0.00911909	CUCCCAA	AK044730|Setx|269254|senataxin	NM_198033|Setx|269254|senataxin
mm9_v1_chrX_-_150130711_150130822	0.00903805	CUCCCAA	AK046557|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK050097|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK046708|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK085035|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	BC064459|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	NM_175429|Kctd12b|207474|potassium channel tetramerisation domain containing 12b
mm9_v1_chr11_+_59475986_59476013	0.00891051	CUCCCAA	AK154807|Mprip|26936|myosin phosphatase Rho interacting protein	NM_012027|Mprip|26936|myosin phosphatase Rho interacting protein	NM_201245|Mprip|26936|myosin phosphatase Rho interacting protein	AK158296|Mprip|26936|myosin phosphatase Rho interacting protein	AK171089|Mprip|26936|myosin phosphatase Rho interacting protein	AK170849|Mprip|26936|myosin phosphatase Rho interacting protein
mm9_v1_chr13_+_76236181_76236251	0.0087357	CUCCCAA	AK164627|Ttc37|218343|tetratricopeptide repeat domain 37	NM_001081352|Ttc37|218343|tetratricopeptide repeat domain 37	AK134255|Ttc37|218343|tetratricopeptide repeat domain 37
mm9_v1_chr2_+_118727248_118727453	0.00871525	CUCCCAA	NM_001045523|Bahd1|228536|bromo adjacent homology domain containing 1	AK152597|Bahd1|228536|bromo adjacent homology domain containing 1
mm9_v1_chr1_+_173319048_173319419	0.00862593	CUCCCAA	AK147757|Arhgap30|226652|Rho GTPase activating protein 30	NM_001005508|Arhgap30|226652|Rho GTPase activating protein 30	AK156351|Arhgap30|226652|Rho GTPase activating protein 30	AK030911|Arhgap30|226652|Rho GTPase activating protein 30	BC082573|Arhgap30|226652|Rho GTPase activating protein 30	AK031319|Arhgap30|226652|Rho GTPase activating protein 30
mm9_v1_chr9_-_44128228_44128398	0.00858195	CUCCCAA	BC060156|C2cd2l|71764|C2 calcium-dependent domain containing 2-like	AK039220|C2cd2l|71764|C2 calcium-dependent domain containing 2-like	AK153804|C2cd2l|71764|C2 calcium-dependent domain containing 2-like	NM_027909|C2cd2l|71764|C2 calcium-dependent domain containing 2-like	AK004920|C2cd2l|71764|C2 calcium-dependent domain containing 2-like
mm9_v1_chr11_-_78349594_78349761	0.00852253	CUCCCAA	BC003906|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK168386|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK147809|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK168805|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK004593|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK172287|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK168704|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK034305|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	NM_001159392|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	NM_009395|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)
mm9_v1_chr11_+_60591019_60591051	0.00850364	CUCCCAA	NM_001085440|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	NM_175491|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK052754|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK164045|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK145010|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK083739|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
mm9_v1_chr11_+_32247758_32247888	0.00805466	CUCCCAA	NM_177364|Sh3pxd2b|268396|SH3 and PX domains 2B	AK169978|Sh3pxd2b|268396|SH3 and PX domains 2B	AK220175|Sh3pxd2b|268396|SH3 and PX domains 2B	AK090119|Sh3pxd2b|268396|SH3 and PX domains 2B	AK042261|Sh3pxd2b|268396|SH3 and PX domains 2B	BC141306|Sh3pxd2b|268396|SH3 and PX domains 2B	AK043324|Sh3pxd2b|268396|SH3 and PX domains 2B	AK089330|Sh3pxd2b|268396|SH3 and PX domains 2B	AK163471|Sh3pxd2b|268396|SH3 and PX domains 2B	AK171384|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115711|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115764|Sh3pxd2b|268396|SH3 and PX domains 2B	AK154898|Sh3pxd2b|268396|SH3 and PX domains 2B	AB430861|Sh3pxd2b|268396|SH3 and PX domains 2B
mm9_v1_chr12_+_30622876_30622919	0.00783552	CUCCCAA	AK142872|Pxdn|69675|peroxidasin homolog (Drosophila)	NM_181395|Pxdn|69675|peroxidasin homolog (Drosophila)	BC150789|Pxdn|69675|peroxidasin homolog (Drosophila)	AK054255|Pxdn|69675|peroxidasin homolog (Drosophila)	AK163597|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr18_-_34784463_34784463	0.00764615	CUCCCAA	NM_030147|Brd8|78656|bromodomain containing 8
mm9_v1_chr9_-_44689356_44689381	0.00761509	CUCCCAA	NM_001081049|Mll1|214162|myeloid/lymphoid or mixed-lineage leukemia 1
mm9_v1_chr18_-_38369326_38369415	0.00745888	CUCCCAA	AY861431|Pcdh1|75599|protocadherin 1	BC040402|Pcdh1|75599|protocadherin 1	NM_029357|Pcdh1|75599|protocadherin 1
mm9_v1_chr17_-_45686604_45686625	0.00648293	CUCCCAA	BC079879|Tmem151b|210573|transmembrane protein 151B	NM_001013749|Tmem151b|210573|transmembrane protein 151B
mm9_v1_chr15_+_100299408_100299504	0.00642459	CUCCCAA	NM_134093|Letmd1|68614|LETM1 domain containing 1	AK158718|Letmd1|68614|LETM1 domain containing 1
mm9_v1_chr15_-_97597988_97598129	0.0061586	CUCCCAA	AK142594|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	AK044566|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	AK169430|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	AK162003|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	BC020532|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	NM_001177810|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	NM_001177811|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	NM_144850|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3
mm9_v1_chr2_+_78709195_78709267	0.00594975	CUCCCAA	BC011477|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	NM_009454|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr3_-_94819118_94819164	0.00579822	CUCCCAA	AK133173|Zfp687|78266|zinc finger protein 687	AK019851|Zfp687|78266|zinc finger protein 687	NM_030074|Zfp687|78266|zinc finger protein 687
mm9_v1_chr17_-_27640248_27640248	0.00557225	CUCCCAA	BC080284|Grm4|268934|glutamate receptor, metabotropic 4	NM_001013385|Grm4|268934|glutamate receptor, metabotropic 4
mm9_v1_chr5_-_23122181_23122418	0.00551862	CUCCCAA	AB006036|Srpk2|20817|serine/arginine-rich protein specific kinase 2	BC020178|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK136861|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK169580|Srpk2|20817|serine/arginine-rich protein specific kinase 2	NM_009274|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chr7_+_134732211_134732297	0.00538015	CUCCCAA	NM_172281|Rnf40|233900|ring finger protein 40	AK089805|Rnf40|233900|ring finger protein 40	AK154982|Rnf40|233900|ring finger protein 40	AK171462|Rnf40|233900|ring finger protein 40	AK129184|Rnf40|233900|ring finger protein 40	BC038348|Rnf40|233900|ring finger protein 40
mm9_v1_chr9_+_118835589_118835685	0.00530366	CUCCCAA	AJ344340|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	AK013115|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	NM_133710|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm9_v1_chr1_+_173180542_173180557	0.00484554	CUCCCAA	AK028364|Adamts4|240913|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4	AK083534|Adamts4|240913|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4	NM_172845|Adamts4|240913|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4	AK157287|Adamts4|240913|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4	AK164900|Adamts4|240913|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4
mm9_v1_chr2_-_120229789_120229851	0.00469481	CUCCCAA	AK086738|Tmem87a|211499|transmembrane protein 87A	BC004047|Tmem87a|211499|transmembrane protein 87A	AK044591|Tmem87a|211499|transmembrane protein 87A	AK134268|Tmem87a|211499|transmembrane protein 87A	AK137137|Tmem87a|211499|transmembrane protein 87A	BC027354|Tmem87a|211499|transmembrane protein 87A	AK088559|Tmem87a|211499|transmembrane protein 87A	NM_001110496|Tmem87a|211499|transmembrane protein 87A	NM_001110497|Tmem87a|211499|transmembrane protein 87A	NM_173734|Tmem87a|211499|transmembrane protein 87A
mm9_v1_chr19_+_44368165_44368165	0.00454489	CUCCCAA	AK147406|Scd2|20250|stearoyl-Coenzyme A desaturase 2	NM_009128|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr6_-_125181731_125181877	0.00446062	CUCCCAA	BC094656|Tapbpl|213233|TAP binding protein-like	BC017613|Tapbpl|213233|TAP binding protein-like	NM_145391|Tapbpl|213233|TAP binding protein-like
mm9_v1_chr11_-_100711785_100712037	0.00443398	CUCCCAA	Z48539|Stat5b|20851|signal transducer and activator of transcription 5B	BC024319|Stat5b|20851|signal transducer and activator of transcription 5B	AK154664|Stat5b|20851|signal transducer and activator of transcription 5B	AK150098|Stat5b|20851|signal transducer and activator of transcription 5B	NM_001113563|Stat5b|20851|signal transducer and activator of transcription 5B	AK045531|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr15_-_91403685_91403705	0.00443013	CUCCCAA	AK147341|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13	NM_001033633|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13
mm9_v1_chr2_+_67955769_67955862	0.00421945	CUCCCAA	NM_020283|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC094660|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132246|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132528|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm9_v1_chr15_+_51871652_51871713	0.00387362	CUCCCAA	AK046414|Aard|239435|alanine and arginine rich domain containing protein	NM_175503|Aard|239435|alanine and arginine rich domain containing protein	BC089505|Aard|239435|alanine and arginine rich domain containing protein	AY134665|Aard|239435|alanine and arginine rich domain containing protein
mm9_v1_chr16_+_31948631_31948724	0.00375731	CUCCCAA	NM_026554|Ncbp2|68092|nuclear cap binding protein subunit 2	AK008980|Ncbp2|68092|nuclear cap binding protein subunit 2	AK078181|Ncbp2|68092|nuclear cap binding protein subunit 2	AK147027|Ncbp2|68092|nuclear cap binding protein subunit 2	AK012659|Ncbp2|68092|nuclear cap binding protein subunit 2	AK014016|Ncbp2|68092|nuclear cap binding protein subunit 2	AK135597|Ncbp2|68092|nuclear cap binding protein subunit 2	AK077841|Ncbp2|68092|nuclear cap binding protein subunit 2	BC118926|Ncbp2|68092|nuclear cap binding protein subunit 2
mm9_v1_chr6_-_137118238_137118241	0.0035756	CUCCCAA	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr15_-_82953171_82953235	0.00339544	CUCCCAA	AK036247|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK159553|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK003698|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168850|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK153565|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK032596|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK146821|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168189|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK088456|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	NM_029101|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm9_v1_chr17_-_34740422_34740567	0.00285114	CUCCCAA	BC012031|Rnf5|54197|ring finger protein 5	AK012729|Rnf5|54197|ring finger protein 5	AK020514|Rnf5|54197|ring finger protein 5	BC016449|Rnf5|54197|ring finger protein 5	NM_019403|Rnf5|54197|ring finger protein 5	AK019289|Rnf5|54197|ring finger protein 5	AK020515|Rnf5|54197|ring finger protein 5	AK010792|Rnf5|54197|ring finger protein 5
mm9_v1_chr1_+_109486582_109486647	0.0028342	CUCCCAA	AK032659|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	NM_001159748|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	NM_011459|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	AK148413|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	U96703|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	BC025121|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	BC011076|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	AK048230|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	AK036811|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8
mm9_v1_chr11_-_120298946_120299015	0.00263233	CUCCCAA	BC065156|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	AK149823|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	AK129375|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	AK141998|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	AK149912|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	NM_001195023|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	NM_199469|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)
mm9_v1_chr1_+_106665395_106665416	0.00252134	CUCCCAA	AK034475|Cdh20|23836|cadherin 20	NM_011800|Cdh20|23836|cadherin 20	BC119606|Cdh20|23836|cadherin 20	BC119607|Cdh20|23836|cadherin 20
mm9_v1_chr5_-_8622882_8622951	0.00237196	CUCCCAA	BC058808|Rundc3b|242819|RUN domain containing 3B	NM_198620|Rundc3b|242819|RUN domain containing 3B
mm9_v1_chr12_+_112655640_112655799	0.00226492	CUCCCAA	NM_028807|1200009I06Rik|74190|RIKEN cDNA 1200009I06 gene	AK004674|1200009I06Rik|74190|RIKEN cDNA 1200009I06 gene	BC075664|1200009I06Rik|74190|RIKEN cDNA 1200009I06 gene
mm9_v1_chr17_+_88035318_88035321	0.00193748	CUCCCAA	NM_008532|Epcam|17075|epithelial cell adhesion molecule
mm9_v1_chr11_-_97560943_97560996	0.00190469	CUCCCAA	NM_001163308|Pcgf2|22658|polycomb group ring finger 2
mm9_v1_chr1_+_174451244_174451278	0.00186231	CUCCCAA	NM_027972|Ccdc19|71870|coiled-coil domain containing 19	AK006449|Ccdc19|71870|coiled-coil domain containing 19	BC151048|Ccdc19|71870|coiled-coil domain containing 19	BC151055|Ccdc19|71870|coiled-coil domain containing 19
mm9_v1_chrX_+_71674576_71674653	0.00167968	CUCCCAA	AK148163|Ikbkg|16151|inhibitor of kappaB kinase gamma	NM_001161422|Ikbkg|16151|inhibitor of kappaB kinase gamma
mm9_v1_chr16_-_55895391_55895437	0.0013296	CUCCCAA	NM_001134457|Fam55c|385658|family with sequence similarity 55, member C	AK157499|Fam55c|385658|family with sequence similarity 55, member C	NM_001134494|Fam55c|385658|family with sequence similarity 55, member C
mm9_v1_chr16_-_32003226_32003372	0.00126229	CUCCCAA	AK158338|Senp5|320213|SUMO/sentrin specific peptidase 5	AY522918|Senp5|320213|SUMO/sentrin specific peptidase 5	BC080830|Senp5|320213|SUMO/sentrin specific peptidase 5	AK043171|Senp5|320213|SUMO/sentrin specific peptidase 5	AK042087|Senp5|320213|SUMO/sentrin specific peptidase 5	AK028177|Senp5|320213|SUMO/sentrin specific peptidase 5	NM_177103|Senp5|320213|SUMO/sentrin specific peptidase 5
mm9_v1_chr3_-_123375305_123375392	0.00112463	CUCCCAA	BC112404|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC079622|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_031186|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AF221095|Ndst3|83398|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm9_v1_chr11_-_116515602_116515626	0.00105972	CUCCCAA	AK087408|Cygb|114886|cytoglobin	BC055040|Cygb|114886|cytoglobin	AK019410|Cygb|114886|cytoglobin	NM_030206|Cygb|114886|cytoglobin
mm9_v1_chr18_+_36953553_36953593	0.00105319	CUCCCAA	BC024881|Zmat2|66492|zinc finger, matrin type 2	NM_025594|Zmat2|66492|zinc finger, matrin type 2	AK012091|Zmat2|66492|zinc finger, matrin type 2	BC089501|Zmat2|66492|zinc finger, matrin type 2	AK008717|Zmat2|66492|zinc finger, matrin type 2
mm9_v1_chr16_+_18498963_18499004	0.00104077	CUCCCAA	NM_023120|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK158210|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK166195|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK173227|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC029862|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC024635|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like
mm9_v1_chr5_-_87355527_87355556	0.000927281	CUCCCAA	BC027200|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	NM_152811|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK004971|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK050435|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1
mm9_v1_chrX_+_136335346_136335366	0.000826035	CUCCCAA	NM_016675|Cldn2|12738|claudin 2	BC085494|Cldn2|12738|claudin 2
mm9_v1_chr10_+_68186493_68186584	0.000342768	CUCCCAA	AK028283|Tmem26|327766|transmembrane protein 26	NM_177794|Tmem26|327766|transmembrane protein 26	AK084351|Tmem26|327766|transmembrane protein 26	AK143866|Tmem26|327766|transmembrane protein 26	BC117502|Tmem26|327766|transmembrane protein 26	BC117503|Tmem26|327766|transmembrane protein 26
mm9_v1_chr3_-_82707880_82707898	0.000236343	CUCCCAA	AF255061|Lrat|79235|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)	AK004953|Lrat|79235|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)	NM_023624|Lrat|79235|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
mm9_v1_chr11_-_4965279_4965341	0.000193896	CUCCCAA	BC031785|Gas2l1|78926|growth arrest-specific 2 like 1	AK082864|Gas2l1|78926|growth arrest-specific 2 like 1	AK019661|Gas2l1|78926|growth arrest-specific 2 like 1	AK052229|Gas2l1|78926|growth arrest-specific 2 like 1	NM_001190406|Gas2l1|78926|growth arrest-specific 2 like 1	NM_001190408|Gas2l1|78926|growth arrest-specific 2 like 1	NM_030228|Gas2l1|78926|growth arrest-specific 2 like 1	NM_144560|Gas2l1|78926|growth arrest-specific 2 like 1
