mm9_v1_chr5_-_125659422_125659602	0.407173	GGACGGA	AF125671|Ncor2|20602|nuclear receptor co-repressor 2	BC057218|Ncor2|20602|nuclear receptor co-repressor 2	AK147394|Ncor2|20602|nuclear receptor co-repressor 2	AF113002|Ncor2|20602|nuclear receptor co-repressor 2	NM_011424|Ncor2|20602|nuclear receptor co-repressor 2
mm9_v1_chr7_+_129432585_129432762	0.396456	GGACGGA	NM_008855|Prkcb|18751|protein kinase C, beta	AK051862|Prkcb|18751|protein kinase C, beta
mm9_v1_chr4_+_104829951_104829954	0.188236	GGACGGA	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr7_+_51565563_51565633	0.184996	GGACGGA	NM_001034115|Shank1|243961|SH3/ankyrin domain gene 1
mm9_v1_chr7_+_56501558_56501558	0.173183	GGACGGA	AK039374|Nav2|78286|neuron navigator 2	NM_175272|Nav2|78286|neuron navigator 2
mm9_v1_chr10_-_80945445_80945464	0.155216	GGACGGA	NM_176954|Celf5|319586|CUGBP, Elav-like family member 5
mm9_v1_chr9_-_45763300_45763376	0.130069	GGACGGA	AK081177|Sidt2|214597|SID1 transmembrane family, member 2	BC023957|Sidt2|214597|SID1 transmembrane family, member 2	NM_172257|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr9_+_34296315_34296391	0.125531	GGACGGA	NM_001190911|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190912|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190913|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_001190914|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	NM_026324|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK013621|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AY169782|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK034142|Kirrel3|67703|kin of IRRE like 3 (Drosophila)	AK079332|Kirrel3|67703|kin of IRRE like 3 (Drosophila)
mm9_v1_chr7_-_148620437_148620500	0.114402	GGACGGA	AK162400|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	BC037949|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	AK155276|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	NM_001177576|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm9_v1_chr9_-_108092712_108092716	0.113339	GGACGGA	NM_007567|Bsn|12217|bassoon
mm9_v1_chr8_+_59799779_59799785	0.111668	GGACGGA	AK035160|Hand2|15111|heart and neural crest derivatives expressed transcript 2	NM_010402|Hand2|15111|heart and neural crest derivatives expressed transcript 2
mm9_v1_chr15_+_80541675_80541764	0.0847442	GGACGGA	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr10_+_39089594_39089612	0.0846728	GGACGGA	AK156584|Fyn|14360|Fyn proto-oncogene	AK171646|Fyn|14360|Fyn proto-oncogene	NM_001122892|Fyn|14360|Fyn proto-oncogene	NM_001122893|Fyn|14360|Fyn proto-oncogene	NM_008054|Fyn|14360|Fyn proto-oncogene	BC092217|Fyn|14360|Fyn proto-oncogene
mm9_v1_chr2_-_153355706_153355706	0.0779797	GGACGGA	AK147524|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	NM_001134300|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene
mm9_v1_chr19_-_5106937_5107039	0.0686811	GGACGGA	AB232584|Rab1b|76308|RAB1B, member RAS oncogene family	BC016408|Rab1b|76308|RAB1B, member RAS oncogene family	AK003609|Rab1b|76308|RAB1B, member RAS oncogene family	NM_029576|Rab1b|76308|RAB1B, member RAS oncogene family	AK042020|Rab1b|76308|RAB1B, member RAS oncogene family	AK156726|Rab1b|76308|RAB1B, member RAS oncogene family
mm9_v1_chr5_-_120953567_120953653	0.0598514	GGACGGA	AK030234|Plbd2|71772|phospholipase B domain containing 2	BC026395|Plbd2|71772|phospholipase B domain containing 2	BC038605|Plbd2|71772|phospholipase B domain containing 2	AF217003|Plbd2|71772|phospholipase B domain containing 2	BC060095|Plbd2|71772|phospholipase B domain containing 2	AK164220|Plbd2|71772|phospholipase B domain containing 2	AK170631|Plbd2|71772|phospholipase B domain containing 2	BC048826|Plbd2|71772|phospholipase B domain containing 2	AK043608|Plbd2|71772|phospholipase B domain containing 2	AK046937|Plbd2|71772|phospholipase B domain containing 2	AK150201|Plbd2|71772|phospholipase B domain containing 2	AK170387|Plbd2|71772|phospholipase B domain containing 2	AK032930|Plbd2|71772|phospholipase B domain containing 2	AK042089|Plbd2|71772|phospholipase B domain containing 2	AK029813|Plbd2|71772|phospholipase B domain containing 2	NM_023625|Plbd2|71772|phospholipase B domain containing 2	AK004973|Plbd2|71772|phospholipase B domain containing 2
mm9_v1_chr7_-_148623725_148623772	0.0546013	GGACGGA	BC050887|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	NM_026646|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm9_v1_chr2_-_167174531_167174736	0.0542525	GGACGGA	AF142673|B4galt5|56336|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5	NM_019835|B4galt5|56336|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5	AB004786|B4galt5|56336|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm9_v1_chr11_+_97660946_97661134	0.0508534	GGACGGA	X96702|Lasp1|16796|LIM and SH3 protein 1	AK148858|Lasp1|16796|LIM and SH3 protein 1	AK034404|Lasp1|16796|LIM and SH3 protein 1	AK049199|Lasp1|16796|LIM and SH3 protein 1	AK078445|Lasp1|16796|LIM and SH3 protein 1	AK168521|Lasp1|16796|LIM and SH3 protein 1	AK169381|Lasp1|16796|LIM and SH3 protein 1	NM_010688|Lasp1|16796|LIM and SH3 protein 1	AK154656|Lasp1|16796|LIM and SH3 protein 1	BC010840|Lasp1|16796|LIM and SH3 protein 1	X96973|Lasp1|16796|LIM and SH3 protein 1	CT010288|Lasp1|16796|LIM and SH3 protein 1
mm9_v1_chr6_+_22238226_22238287	0.0481594	GGACGGA	AK053805|Wnt16|93735|wingless-related MMTV integration site 16	NM_053116|Wnt16|93735|wingless-related MMTV integration site 16	AK054110|Wnt16|93735|wingless-related MMTV integration site 16	BC115811|Wnt16|93735|wingless-related MMTV integration site 16	BC115925|Wnt16|93735|wingless-related MMTV integration site 16	AK043534|Wnt16|93735|wingless-related MMTV integration site 16
mm9_v1_chr10_+_52137324_52137453	0.0314998	GGACGGA	AK155620|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	NM_030250|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	AK167939|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	AK167741|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	BC018372|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	BC003223|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
mm9_v1_chr11_+_74462965_74463046	0.0278643	GGACGGA	AK145708|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK157310|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154925|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	NM_001081158|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154146|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK036540|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK150045|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	BC072573|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene
mm9_v1_chr12_+_81891479_81891592	0.0277761	GGACGGA	AK030233|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK161132|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK143867|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	BC040401|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	NM_178682|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK151939|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK152820|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK164823|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chr7_-_108986297_108986435	0.0276128	GGACGGA	AK133359|Inppl1|16332|inositol polyphosphate phosphatase-like 1	AK149873|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_001122739|Inppl1|16332|inositol polyphosphate phosphatase-like 1	BC063080|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chr15_-_77137425_77137482	0.0223348	GGACGGA	AK139555|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110827|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_053104|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_175387|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chrX_+_148237785_148237953	0.0207753	GGACGGA	AK163416|Huwe1|59026|HECT, UBA and WWE domain containing 1	NM_021523|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK049460|Huwe1|59026|HECT, UBA and WWE domain containing 1	DQ097265|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK045183|Huwe1|59026|HECT, UBA and WWE domain containing 1	AY772010|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK165140|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK165648|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK031374|Huwe1|59026|HECT, UBA and WWE domain containing 1
mm9_v1_chr2_-_91864276_91864398	0.0160483	GGACGGA	AB017614|Creb3l1|26427|cAMP responsive element binding protein 3-like 1	BC016447|Creb3l1|26427|cAMP responsive element binding protein 3-like 1	AK142368|Creb3l1|26427|cAMP responsive element binding protein 3-like 1	NM_011957|Creb3l1|26427|cAMP responsive element binding protein 3-like 1
mm9_v1_chr7_+_56214442_56214485	0.00994108	GGACGGA	AK019901|Nav2|78286|neuron navigator 2	NM_001111016|Nav2|78286|neuron navigator 2	AK084063|Nav2|78286|neuron navigator 2	AK162444|Nav2|78286|neuron navigator 2
mm9_v1_chr16_-_18413549_18413586	0.00983256	GGACGGA	NM_001111063|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr5_-_33196860_33196908	0.00979543	GGACGGA	AK134346|C330019G07Rik|215476|RIKEN cDNA C330019G07 gene	NM_194340|C330019G07Rik|215476|RIKEN cDNA C330019G07 gene
mm9_v1_chr7_-_108986589_108986739	0.00814461	GGACGGA	AF162781|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_010567|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chr5_+_122110531_122110595	0.00556554	GGACGGA	AK143718|Brap|72399|BRCA1 associated protein	BC062932|Brap|72399|BRCA1 associated protein	NM_028227|Brap|72399|BRCA1 associated protein
mm9_v1_chr16_-_18426802_18426808	0.0038701	GGACGGA	NM_001111062|Comt|12846|catechol-O-methyltransferase	NM_007744|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr7_+_134615022_134615162	0.00329195	GGACGGA	BC055033|Prr14|233895|proline rich 14	NM_145589|Prr14|233895|proline rich 14	AK133884|Prr14|233895|proline rich 14
