mm9_v1_chr13_-_6647924_6648034	6.00368	AAAGUGC	CT010268|Pfkp|56421|phosphofructokinase, platelet	AY779275|Pfkp|56421|phosphofructokinase, platelet	AY779276|Pfkp|56421|phosphofructokinase, platelet	BC006926|Pfkp|56421|phosphofructokinase, platelet	AK165422|Pfkp|56421|phosphofructokinase, platelet	AK165425|Pfkp|56421|phosphofructokinase, platelet	Y19008|Pfkp|56421|phosphofructokinase, platelet	AK049841|Pfkp|56421|phosphofructokinase, platelet	AK170624|Pfkp|56421|phosphofructokinase, platelet	NM_019703|Pfkp|56421|phosphofructokinase, platelet	AK004790|Pfkp|56421|phosphofructokinase, platelet	AK020367|Pfkp|56421|phosphofructokinase, platelet	AK054193|Pfkp|56421|phosphofructokinase, platelet	AK076803|Pfkp|56421|phosphofructokinase, platelet	AK078254|Pfkp|56421|phosphofructokinase, platelet	AK098162|Pfkp|56421|phosphofructokinase, platelet	AK152670|Pfkp|56421|phosphofructokinase, platelet	AK154125|Pfkp|56421|phosphofructokinase, platelet	AK171062|Pfkp|56421|phosphofructokinase, platelet	AF123533|Pfkp|56421|phosphofructokinase, platelet
mm9_v1_chr17_+_44215761_44215847	3.39739	AAAGUGC	NM_032003|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	NM_001168620|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	AK032341|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	AF233377|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	BC089320|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5
mm9_v1_chr11_-_98190774_98191090	3.31889	AAAGUGC	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr11_+_98603186_98603266	2.89486	AAAGUGC	AK078233|Thra|21833|thyroid hormone receptor alpha	NM_178060|Thra|21833|thyroid hormone receptor alpha	BC046795|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr6_-_84543739_84543901	2.86009	AAAGUGC	AY134662|Cyp26b1|232174|cytochrome P450, family 26, subfamily b, polypeptide 1	NM_175475|Cyp26b1|232174|cytochrome P450, family 26, subfamily b, polypeptide 1	BC059246|Cyp26b1|232174|cytochrome P450, family 26, subfamily b, polypeptide 1	NM_001177713|Cyp26b1|232174|cytochrome P450, family 26, subfamily b, polypeptide 1
mm9_v1_chr1_+_145487825_145487990	2.80139	AAAGUGC	AK036141|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_020025|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK034371|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK083168|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK080106|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC046322|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm9_v1_chr19_-_46401618_46401645	2.46337	AAAGUGC	BC057353|Psd|73728|pleckstrin and Sec7 domain containing	NM_028627|Psd|73728|pleckstrin and Sec7 domain containing
mm9_v1_chr19_-_19185685_19185685	2.33233	AAAGUGC	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr3_+_7366586_7366727	2.31216	AAAGUGC	NM_008862|Pkia|18767|protein kinase inhibitor, alpha	BC048244|Pkia|18767|protein kinase inhibitor, alpha	AK139347|Pkia|18767|protein kinase inhibitor, alpha
mm9_v1_chr17_+_29230715_29230763	2.14243	AAAGUGC	AK139306|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK149910|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK170467|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	NM_007669|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK007630|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK089093|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	U24173|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	BC002043|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr15_-_56526052_56526100	2.12836	AAAGUGC	U52524|Has2|15117|hyaluronan synthase 2	BC080281|Has2|15117|hyaluronan synthase 2	U69695|Has2|15117|hyaluronan synthase 2	AK045020|Has2|15117|hyaluronan synthase 2	AK079729|Has2|15117|hyaluronan synthase 2	NM_008216|Has2|15117|hyaluronan synthase 2
mm9_v1_chr12_+_30213224_30213265	2.11918	AAAGUGC	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr18_+_63081977_63081983	2.0584	AAAGUGC	AK172004|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK156319|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	NM_133237|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	BC141269|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	BC141270|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1
mm9_v1_chr5_-_84846348_84846408	2.03667	AAAGUGC	BC057401|Epha5|13839|Eph receptor A5	AK133698|Epha5|13839|Eph receptor A5	AK034289|Epha5|13839|Eph receptor A5	AK049740|Epha5|13839|Eph receptor A5	NM_007937|Epha5|13839|Eph receptor A5
mm9_v1_chr1_-_174228105_174228194	2.0325	AAAGUGC	BC036127|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK129212|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK147331|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK148775|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK161840|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK168703|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK052863|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK137602|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK164509|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	NM_178405|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide
mm9_v1_chr4_-_82151180_82151288	2.01113	AAAGUGC	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr1_-_77511653_77511664	1.98708	AAAGUGC	AK028509|Epha4|13838|Eph receptor A4	AK147698|Epha4|13838|Eph receptor A4	AK132203|Epha4|13838|Eph receptor A4	NM_007936|Epha4|13838|Eph receptor A4	S57168|Epha4|13838|Eph receptor A4	X65138|Epha4|13838|Eph receptor A4
mm9_v1_chr2_+_49921978_49921983	1.96396	AAAGUGC	NM_177139|Lypd6|320343|LY6/PLAUR domain containing 6	AK053620|Lypd6|320343|LY6/PLAUR domain containing 6
mm9_v1_chr16_-_67621054_67621188	1.94447	AAAGUGC	AK046800|Cadm2|239857|cell adhesion molecule 2	AK163636|Cadm2|239857|cell adhesion molecule 2	AK038842|Cadm2|239857|cell adhesion molecule 2	AK043760|Cadm2|239857|cell adhesion molecule 2	AK165030|Cadm2|239857|cell adhesion molecule 2	NM_001145977|Cadm2|239857|cell adhesion molecule 2	NM_178721|Cadm2|239857|cell adhesion molecule 2
mm9_v1_chr10_+_4424140_4424212	1.89453	AAAGUGC	AK030492|Rgs17|56533|regulator of G-protein signaling 17	NM_001161822|Rgs17|56533|regulator of G-protein signaling 17	NM_019958|Rgs17|56533|regulator of G-protein signaling 17	AK018279|Rgs17|56533|regulator of G-protein signaling 17	AK045770|Rgs17|56533|regulator of G-protein signaling 17	AK046009|Rgs17|56533|regulator of G-protein signaling 17	AK078745|Rgs17|56533|regulator of G-protein signaling 17	AK163188|Rgs17|56533|regulator of G-protein signaling 17	AF191555|Rgs17|56533|regulator of G-protein signaling 17	BC064782|Rgs17|56533|regulator of G-protein signaling 17
mm9_v1_chr11_-_115375672_115375704	1.74762	AAAGUGC	BC003758|Hn1|15374|hematological and neurological expressed sequence 1	NM_008258|Hn1|15374|hematological and neurological expressed sequence 1	U90123|Hn1|15374|hematological and neurological expressed sequence 1	AK167961|Hn1|15374|hematological and neurological expressed sequence 1	AK013122|Hn1|15374|hematological and neurological expressed sequence 1	AK004909|Hn1|15374|hematological and neurological expressed sequence 1	AK010057|Hn1|15374|hematological and neurological expressed sequence 1	AK159784|Hn1|15374|hematological and neurological expressed sequence 1	AK167466|Hn1|15374|hematological and neurological expressed sequence 1	AK168632|Hn1|15374|hematological and neurological expressed sequence 1	AK014212|Hn1|15374|hematological and neurological expressed sequence 1	AK152560|Hn1|15374|hematological and neurological expressed sequence 1	AK150410|Hn1|15374|hematological and neurological expressed sequence 1
mm9_v1_chr7_-_81158546_81158567	1.71498	AAAGUGC	X83562|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	BC096546|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	NM_009181|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
mm9_v1_chr7_-_116925058_116925063	1.64299	AAAGUGC	AK020731|Nrip3|78593|nuclear receptor interacting protein 3	AK083130|Nrip3|78593|nuclear receptor interacting protein 3	NM_020610|Nrip3|78593|nuclear receptor interacting protein 3
mm9_v1_chr4_+_151712739_151712761	1.6394	AAAGUGC	NM_001081376|Chd5|269610|chromodomain helicase DNA binding protein 5	NM_029216|Chd5|269610|chromodomain helicase DNA binding protein 5	AK147563|Chd5|269610|chromodomain helicase DNA binding protein 5
mm9_v1_chr1_+_180459245_180459259	1.63904	AAAGUGC	AB355846|Kif26b|269152|kinesin family member 26B	AK052046|Kif26b|269152|kinesin family member 26B	NM_001161665|Kif26b|269152|kinesin family member 26B
mm9_v1_chr10_-_121484248_121484370	1.63613	AAAGUGC	NM_001081037|Srgap1|117600|SLIT-ROBO Rho GTPase activating protein 1	BC120892|Srgap1|117600|SLIT-ROBO Rho GTPase activating protein 1	BC120893|Srgap1|117600|SLIT-ROBO Rho GTPase activating protein 1	AK138257|Srgap1|117600|SLIT-ROBO Rho GTPase activating protein 1
mm9_v1_chr15_+_32174546_32174624	1.60613	AAAGUGC	AK143026|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK045236|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	NM_009154|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK031231|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK054256|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK165206|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK039101|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK157706|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK141612|Sema5a|20356|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
mm9_v1_chr4_-_86876328_86876443	1.56393	AAAGUGC	AK038800|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK136058|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_172426|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr14_-_75347637_75347721	1.5618	AAAGUGC	AK129264|Lrch1|380916|leucine-rich repeats and calponin homology (CH) domain containing 1	AK143909|Lrch1|380916|leucine-rich repeats and calponin homology (CH) domain containing 1	NM_001033439|Lrch1|380916|leucine-rich repeats and calponin homology (CH) domain containing 1
mm9_v1_chr2_+_65683823_65683911	1.54838	AAAGUGC	NM_153409|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	NM_178634|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	EF210820|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK039150|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK082649|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK020730|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK080761|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	BC055701|Csrnp3|77771|cysteine-serine-rich nuclear protein 3
mm9_v1_chr14_-_37781943_37781973	1.52335	AAAGUGC	AK147383|Gcap14|72972|granule cell antiserum positive 14	NM_027045|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr5_+_31014229_31014273	1.49043	AAAGUGC	AK044866|Dpysl5|65254|dihydropyrimidinase-like 5	BC065054|Dpysl5|65254|dihydropyrimidinase-like 5	NM_023047|Dpysl5|65254|dihydropyrimidinase-like 5	BC103789|Dpysl5|65254|dihydropyrimidinase-like 5
mm9_v1_chr3_-_9610062_9610137	1.47396	AAAGUGC	AF292939|Zfp704|170753|zinc finger protein 704	NM_133218|Zfp704|170753|zinc finger protein 704
mm9_v1_chr17_-_43803963_43804162	1.47118	AAAGUGC	AK014394|Slc25a27|74011|solute carrier family 25, member 27	NM_028711|Slc25a27|74011|solute carrier family 25, member 27	BC138993|Slc25a27|74011|solute carrier family 25, member 27	BC138994|Slc25a27|74011|solute carrier family 25, member 27	AB106930|Slc25a27|74011|solute carrier family 25, member 27	AK021314|Slc25a27|74011|solute carrier family 25, member 27	AK043831|Slc25a27|74011|solute carrier family 25, member 27
mm9_v1_chr2_+_4073908_4073934	1.43406	AAAGUGC	NM_172475|Frmd4a|209630|FERM domain containing 4A	AK034706|Frmd4a|209630|FERM domain containing 4A	BC058672|Frmd4a|209630|FERM domain containing 4A	AK163887|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr3_-_10440061_10440125	1.39986	AAAGUGC	BC070431|Snx16|74718|sorting nexin 16	AK032055|Snx16|74718|sorting nexin 16	AK015872|Snx16|74718|sorting nexin 16	AK043975|Snx16|74718|sorting nexin 16	AK166422|Snx16|74718|sorting nexin 16	NM_001127191|Snx16|74718|sorting nexin 16	NM_029068|Snx16|74718|sorting nexin 16
mm9_v1_chr14_+_117324518_117324572	1.37872	AAAGUGC	AK164668|Gpc6|23888|glypican 6	AK135442|Gpc6|23888|glypican 6	NM_001079844|Gpc6|23888|glypican 6	NM_011821|Gpc6|23888|glypican 6
mm9_v1_chr11_+_79404713_79404722	1.3754	AAAGUGC	AK046734|Rab11fip4|268451|RAB11 family interacting protein 4 (class II)	NM_175543|Rab11fip4|268451|RAB11 family interacting protein 4 (class II)
mm9_v1_chr2_+_155601077_155601159	1.34443	AAAGUGC	NM_010808|Mmp24|17391|matrix metallopeptidase 24	AJ010262|Mmp24|17391|matrix metallopeptidase 24	AB021226|Mmp24|17391|matrix metallopeptidase 24
mm9_v1_chr8_+_12915892_12915957	1.33276	AAAGUGC	NM_178076|Mcf2l|17207|mcf.2 transforming sequence-like	AK082849|Mcf2l|17207|mcf.2 transforming sequence-like	AK048898|Mcf2l|17207|mcf.2 transforming sequence-like	BC058622|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr4_-_134989653_134989790	1.31164	AAAGUGC	AK042201|Rcan3|53902|regulator of calcineurin 3	AK155270|Rcan3|53902|regulator of calcineurin 3	NM_022980|Rcan3|53902|regulator of calcineurin 3	AK043916|Rcan3|53902|regulator of calcineurin 3
mm9_v1_chr2_+_179777187_179777250	1.29608	AAAGUGC	NM_178750|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	BC054730|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK133944|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr7_+_56501558_56501558	1.28408	AAAGUGC	AK039374|Nav2|78286|neuron navigator 2	NM_175272|Nav2|78286|neuron navigator 2
mm9_v1_chr11_-_101087738_101087767	1.28026	AAAGUGC	AK045374|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK138942|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	U60453|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK164192|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK140694|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	NM_007970|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr6_-_85452851_85452987	1.26598	AAAGUGC	AK147681|Fbxo41|330369|F-box protein 41	AK147230|Fbxo41|330369|F-box protein 41	NM_001001160|Fbxo41|330369|F-box protein 41	BC070445|Fbxo41|330369|F-box protein 41
mm9_v1_chr14_-_32249046_32249246	1.24889	AAAGUGC	AB016835|Sh3bp5|24056|SH3-domain binding protein 5 (BTK-associated)	BC053741|Sh3bp5|24056|SH3-domain binding protein 5 (BTK-associated)	NM_011894|Sh3bp5|24056|SH3-domain binding protein 5 (BTK-associated)
mm9_v1_chr4_-_100937800_100937898	1.21526	AAAGUGC	AK133866|Jak1|16451|Janus kinase 1	AK141210|Jak1|16451|Janus kinase 1	AK134143|Jak1|16451|Janus kinase 1	AK143650|Jak1|16451|Janus kinase 1	S63728|Jak1|16451|Janus kinase 1	BC039752|Jak1|16451|Janus kinase 1	AK152128|Jak1|16451|Janus kinase 1	AK148521|Jak1|16451|Janus kinase 1	AK081552|Jak1|16451|Janus kinase 1	NM_146145|Jak1|16451|Janus kinase 1
mm9_v1_chr1_-_192802869_192802928	1.20557	AAAGUGC	AK140989|Vash2|226841|vasohibin 2	NM_144879|Vash2|226841|vasohibin 2
mm9_v1_chr8_-_88364846_88364855	1.20365	AAAGUGC	NM_028007|Itfg1|71927|integrin alpha FG-GAP repeat containing 1
mm9_v1_chr14_+_45839391_45839393	1.19427	AAAGUGC	AK082691|Gpr137c|70713|G protein-coupled receptor 137C	NM_027518|Gpr137c|70713|G protein-coupled receptor 137C	AK018183|Gpr137c|70713|G protein-coupled receptor 137C
mm9_v1_chr10_-_42894259_42894340	1.17623	AAAGUGC	BC059851|Sobp|109205|sine oculis-binding protein homolog (Drosophila)	NM_175407|Sobp|109205|sine oculis-binding protein homolog (Drosophila)
mm9_v1_chr4_+_134479504_134479540	1.16852	AAAGUGC	AK028145|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK003799|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK012363|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK150024|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK160993|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169598|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169760|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	NM_023665|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK029529|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr14_+_8930682_8930828	1.16245	AAAGUGC	AK150660|Pxk|218699|PX domain containing serine/threonine kinase	AK147037|Pxk|218699|PX domain containing serine/threonine kinase	AK172463|Pxk|218699|PX domain containing serine/threonine kinase	NM_145458|Pxk|218699|PX domain containing serine/threonine kinase	NM_178279|Pxk|218699|PX domain containing serine/threonine kinase	AK170361|Pxk|218699|PX domain containing serine/threonine kinase	AK157364|Pxk|218699|PX domain containing serine/threonine kinase	AK150337|Pxk|218699|PX domain containing serine/threonine kinase	AK150413|Pxk|218699|PX domain containing serine/threonine kinase	BC016131|Pxk|218699|PX domain containing serine/threonine kinase	AK156146|Pxk|218699|PX domain containing serine/threonine kinase	AK169565|Pxk|218699|PX domain containing serine/threonine kinase	AK048910|Pxk|218699|PX domain containing serine/threonine kinase	AK151098|Pxk|218699|PX domain containing serine/threonine kinase	AK152058|Pxk|218699|PX domain containing serine/threonine kinase	AK152789|Pxk|218699|PX domain containing serine/threonine kinase	AK153067|Pxk|218699|PX domain containing serine/threonine kinase	AK169112|Pxk|218699|PX domain containing serine/threonine kinase	AK028501|Pxk|218699|PX domain containing serine/threonine kinase	AK172347|Pxk|218699|PX domain containing serine/threonine kinase	AK166036|Pxk|218699|PX domain containing serine/threonine kinase	DQ095196|Pxk|218699|PX domain containing serine/threonine kinase	DQ095197|Pxk|218699|PX domain containing serine/threonine kinase
mm9_v1_chr2_-_90420626_90420803	1.15549	AAAGUGC	AY038891|Ptprj|19271|protein tyrosine phosphatase, receptor type, J	AY039232|Ptprj|19271|protein tyrosine phosphatase, receptor type, J	AK147318|Ptprj|19271|protein tyrosine phosphatase, receptor type, J	AK147556|Ptprj|19271|protein tyrosine phosphatase, receptor type, J	D45212|Ptprj|19271|protein tyrosine phosphatase, receptor type, J	NM_008982|Ptprj|19271|protein tyrosine phosphatase, receptor type, J
mm9_v1_chr11_+_105451296_105451348	1.153	AAAGUGC	AK019982|Tanc2|77097|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	NM_181071|Tanc2|77097|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	AK051973|Tanc2|77097|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm9_v1_chr8_+_93593971_93593997	1.11508	AAAGUGC	AK155256|Rbl2|19651|retinoblastoma-like 2	NM_011250|Rbl2|19651|retinoblastoma-like 2	AK142172|Rbl2|19651|retinoblastoma-like 2
mm9_v1_chr7_-_112781902_112782053	1.11073	AAAGUGC	BC003347|Trim3|55992|tripartite motif-containing 3	AF220019|Trim3|55992|tripartite motif-containing 3	AK144674|Trim3|55992|tripartite motif-containing 3	NM_018880|Trim3|55992|tripartite motif-containing 3	AK170029|Trim3|55992|tripartite motif-containing 3	BC034263|Trim3|55992|tripartite motif-containing 3	AK019165|Trim3|55992|tripartite motif-containing 3
mm9_v1_chr6_-_90760116_90760132	1.09246	AAAGUGC	NM_001134384|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr18_+_37098858_37098971	1.08611	AAAGUGC	BC030897|Pcdha2|353234|protocadherin alpha 2	NM_198117|Pcdha2|353234|protocadherin alpha 2	BC141390|Pcdha2|353234|protocadherin alpha 2	AY013760|Pcdha2|353234|protocadherin alpha 2
mm9_v1_chr12_+_30219769_30219800	1.07225	AAAGUGC	AK036205|Myt1l|17933|myelin transcription factor 1-like	NM_001093776|Myt1l|17933|myelin transcription factor 1-like	BC079651|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr6_+_96063137_96063148	1.0624	AAAGUGC	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr8_+_46593141_46593271	1.06058	AAAGUGC	AK171632|Sorbs2|234214|sorbin and SH3 domain containing 2	NM_172752|Sorbs2|234214|sorbin and SH3 domain containing 2	AK139388|Sorbs2|234214|sorbin and SH3 domain containing 2	BC151038|Sorbs2|234214|sorbin and SH3 domain containing 2	BC172140|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr17_+_27110101_27110235	1.0537	AAAGUGC	BC049933|Zbtb9|474156|zinc finger and BTB domain containing 9	NM_001005916|Zbtb9|474156|zinc finger and BTB domain containing 9	AK154850|Zbtb9|474156|zinc finger and BTB domain containing 9	AK030262|Zbtb9|474156|zinc finger and BTB domain containing 9
mm9_v1_chr11_+_117515548_117515602	1.04831	AAAGUGC	NM_198022|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr4_+_28740280_28740313	1.04703	AAAGUGC	AK033903|Epha7|13841|Eph receptor A7	NM_001122889|Epha7|13841|Eph receptor A7	NM_010141|Epha7|13841|Eph receptor A7	X79082|Epha7|13841|Eph receptor A7	X79083|Epha7|13841|Eph receptor A7	X79084|Epha7|13841|Eph receptor A7
mm9_v1_chr1_+_59969845_59969868	1.04434	AAAGUGC	AK154812|Fam117b|72750|family with sequence similarity 117, member B	NM_001037725|Fam117b|72750|family with sequence similarity 117, member B
mm9_v1_chr11_+_17059297_17059300	1.01546	AAAGUGC	NM_024459|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm9_v1_chr2_+_134611879_134611910	0.992205	AAAGUGC	AK143153|Plcb1|18795|phospholipase C, beta 1	NM_001145830|Plcb1|18795|phospholipase C, beta 1	NM_019677|Plcb1|18795|phospholipase C, beta 1	AK040911|Plcb1|18795|phospholipase C, beta 1
mm9_v1_chr3_-_30868320_30868353	0.990334	AAAGUGC	BC132533|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145123|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145124|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AJ414610|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK037348|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK087339|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166208|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166296|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165954|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165955|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165956|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_153421|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr12_+_82127791_82127817	0.973184	AAAGUGC	AK040931|Smoc1|64075|SPARC related modular calcium binding 1	NM_001146217|Smoc1|64075|SPARC related modular calcium binding 1	NM_022316|Smoc1|64075|SPARC related modular calcium binding 1	BC031804|Smoc1|64075|SPARC related modular calcium binding 1	AF070470|Smoc1|64075|SPARC related modular calcium binding 1
mm9_v1_chr2_-_166888514_166888514	0.966941	AAAGUGC	AK147564|Znfx1|98999|zinc finger, NFX1-type containing 1	AK147652|Znfx1|98999|zinc finger, NFX1-type containing 1	NM_001033196|Znfx1|98999|zinc finger, NFX1-type containing 1
mm9_v1_chr6_+_29867012_29867023	0.955349	AAAGUGC	AK041004|Fam40b|320609|family with sequence similarity 40, member B	AK042073|Fam40b|320609|family with sequence similarity 40, member B	AK052271|Fam40b|320609|family with sequence similarity 40, member B	AK163706|Fam40b|320609|family with sequence similarity 40, member B	NM_001037740|Fam40b|320609|family with sequence similarity 40, member B	NM_177204|Fam40b|320609|family with sequence similarity 40, member B	BC147502|Fam40b|320609|family with sequence similarity 40, member B	BC172034|Fam40b|320609|family with sequence similarity 40, member B
mm9_v1_chr19_+_45063750_45063833	0.952013	AAAGUGC	AK039355|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	BC054532|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	AK173219|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	AF134918|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	NM_011976|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm9_v1_chr6_+_86799460_86799754	0.948589	AAAGUGC	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr2_+_91490266_91490274	0.945134	AAAGUGC	AK046291|Arhgap1|228359|Rho GTPase activating protein 1	NM_001145902|Arhgap1|228359|Rho GTPase activating protein 1
mm9_v1_chr1_-_90598670_90598781	0.905854	AAAGUGC	AK080335|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080380|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080743|Arl4c|320982|ADP-ribosylation factor-like 4C	BC055769|Arl4c|320982|ADP-ribosylation factor-like 4C	NM_177305|Arl4c|320982|ADP-ribosylation factor-like 4C
mm9_v1_chr8_+_113245378_113245384	0.897664	AAAGUGC	BC060632|Mtss1l|244654|metastasis suppressor 1-like	NM_198625|Mtss1l|244654|metastasis suppressor 1-like
mm9_v1_chr18_+_37127284_37127409	0.885587	AAAGUGC	D86917|Pcdha6|12937|protocadherin alpha 6	BC150815|Pcdha6|12937|protocadherin alpha 6	BC150816|Pcdha6|12937|protocadherin alpha 6	BC054813|Pcdha6|12937|protocadherin alpha 6	AY013764|Pcdha6|12937|protocadherin alpha 6	NM_007767|Pcdha6|12937|protocadherin alpha 6
mm9_v1_chr3_-_122322556_122322614	0.879632	AAAGUGC	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr12_+_56937309_56937356	0.876064	AAAGUGC	AK154678|Brms1l|52592|breast cancer metastasis-suppressor 1-like	AK155742|Brms1l|52592|breast cancer metastasis-suppressor 1-like	NM_001037756|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr1_+_89652645_89652774	0.867818	AAAGUGC	AK030983|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	NM_029846|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK145673|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK155358|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK163246|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK170073|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	BC049122|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK048873|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK005181|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087879|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087880|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087881|Atg16l1|77040|autophagy-related 16-like 1 (yeast)
mm9_v1_chr8_+_63111621_63111675	0.861648	AAAGUGC	AK089654|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_027756|Mfap3l|71306|microfibrillar-associated protein 3-like	BC095950|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr4_-_53172748_53172872	0.860122	AAAGUGC	AK051920|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1	NM_013454|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1
mm9_v1_chr18_+_39152776_39152837	0.857218	AAAGUGC	AK011368|Arhgap26|71302|Rho GTPase activating protein 26	NM_175164|Arhgap26|71302|Rho GTPase activating protein 26
mm9_v1_chr15_+_41278949_41279049	0.853082	AAAGUGC	NM_001130166|Oxr1|170719|oxidation resistance 1	AK158703|Oxr1|170719|oxidation resistance 1
mm9_v1_chr17_-_15963372_15963555	0.851021	AAAGUGC	BC138890|Rgmb|68799|RGM domain family, member B	AK035713|Rgmb|68799|RGM domain family, member B	AK046637|Rgmb|68799|RGM domain family, member B	AK080819|Rgmb|68799|RGM domain family, member B	BC096024|Rgmb|68799|RGM domain family, member B	AK030386|Rgmb|68799|RGM domain family, member B	AK047390|Rgmb|68799|RGM domain family, member B	BC030405|Rgmb|68799|RGM domain family, member B	AJ557514|Rgmb|68799|RGM domain family, member B	NM_178615|Rgmb|68799|RGM domain family, member B
mm9_v1_chr19_+_46227039_46227050	0.846667	AAAGUGC	BC076569|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	NM_178930|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr5_-_74464390_74464465	0.844391	AAAGUGC	BC039916|Usp46|69727|ubiquitin specific peptidase 46	NM_177561|Usp46|69727|ubiquitin specific peptidase 46	AK145298|Usp46|69727|ubiquitin specific peptidase 46
mm9_v1_chr11_-_98448496_98448592	0.841357	AAAGUGC	BC046594|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK087497|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK012718|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK154085|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK009621|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	NM_025661|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)
mm9_v1_chr2_+_71819264_71819343	0.83512	AAAGUGC	AK220281|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AB021132|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK161934|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK017479|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AF115480|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	BC139822|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	NM_019688|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr4_-_138648762_138648917	0.829409	AAAGUGC	BC099856|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	BC099857|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	BC099858|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	D50263|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	AK167311|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	AK133787|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	AK146535|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	NM_008675|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	AK158008|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1
mm9_v1_chr6_+_83745142_83745245	0.825433	AAAGUGC	NM_001164187|Nagk|56174|N-acetylglucosamine kinase	AK155292|Nagk|56174|N-acetylglucosamine kinase	BC004689|Nagk|56174|N-acetylglucosamine kinase	AJ242911|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chr9_-_96531911_96531965	0.82399	AAAGUGC	AB056433|Rasa2|114713|RAS p21 protein activator 2	AK034434|Rasa2|114713|RAS p21 protein activator 2	NM_053268|Rasa2|114713|RAS p21 protein activator 2	AK154499|Rasa2|114713|RAS p21 protein activator 2	AK166654|Rasa2|114713|RAS p21 protein activator 2
mm9_v1_chr5_+_31117077_31117214	0.810247	AAAGUGC	BC048833|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AF468005|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	BC057918|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	NM_133350|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AK177097|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr9_+_57787915_57787952	0.808775	AAAGUGC	AK156123|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	BC057875|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	NM_011352|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	AF030699|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	AB017532|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	AF176670|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm9_v1_chr6_-_94650118_94650173	0.802806	AAAGUGC	D78572|Lrig1|16206|leucine-rich repeats and immunoglobulin-like domains 1	NM_008377|Lrig1|16206|leucine-rich repeats and immunoglobulin-like domains 1
mm9_v1_chr8_-_26127376_26127404	0.801121	AAAGUGC	AK122188|Adam9|11502|a disintegrin and metallopeptidase domain 9 (meltrin gamma)	NM_007404|Adam9|11502|a disintegrin and metallopeptidase domain 9 (meltrin gamma)
mm9_v1_chr9_+_59598963_59599005	0.79715	AAAGUGC	NM_173018|Myo9a|270163|myosin IXa	AK048681|Myo9a|270163|myosin IXa
mm9_v1_chr9_-_123760992_123761028	0.79197	AAAGUGC	AK081259|Fyco1|17281|FYVE and coiled-coil domain containing 1	AK013060|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_001110253|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chr5_+_123157541_123157662	0.790874	AAAGUGC	NM_011026|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK150351|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK041904|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK163104|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK162498|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	BC002099|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK162820|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	BC005597|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK153427|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AF089751|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AF089752|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251459|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251460|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251461|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251462|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4
mm9_v1_chr2_+_135883662_135883710	0.789713	AAAGUGC	NM_029530|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr16_-_32868355_32868453	0.787998	AAAGUGC	BC057307|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK042428|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170223|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK122221|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK030368|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC060601|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	NM_172615|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170002|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK171583|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC067390|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene
mm9_v1_chr9_-_62996767_62996767	0.787564	AAAGUGC	AK029916|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163758|Skor1|207667|SKI family transcriptional corepressor 1
mm9_v1_chr11_+_70658261_70658270	0.780549	AAAGUGC	AK134587|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	NM_019400|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1
mm9_v1_chr5_-_138705172_138705284	0.777267	AAAGUGC	AK138960|BC037034|231807|cDNA sequence BC037034	AK046882|BC037034|231807|cDNA sequence BC037034	NM_153161|BC037034|231807|cDNA sequence BC037034
mm9_v1_chr4_-_128483355_128483429	0.777132	AAAGUGC	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr8_+_114060341_114060576	0.768289	AAAGUGC	AK079338|Znrf1|170737|zinc and ring finger 1	NM_001168621|Znrf1|170737|zinc and ring finger 1	NM_001168622|Znrf1|170737|zinc and ring finger 1	NM_133206|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr1_+_75139300_75139429	0.757873	AAAGUGC	AK034667|Fam134a|227298|family with sequence similarity 134, member A	NM_170755|Fam134a|227298|family with sequence similarity 134, member A	AK172093|Fam134a|227298|family with sequence similarity 134, member A	BC070406|Fam134a|227298|family with sequence similarity 134, member A	AK165957|Fam134a|227298|family with sequence similarity 134, member A	AK160400|Fam134a|227298|family with sequence similarity 134, member A
mm9_v1_chr7_-_120512849_120512864	0.74444	AAAGUGC	BC050781|Btbd10|68815|BTB (POZ) domain containing 10	NM_133700|Btbd10|68815|BTB (POZ) domain containing 10
mm9_v1_chr10_-_126700387_126700418	0.742711	AAAGUGC	AK220479|Kif5a|16572|kinesin family member 5A	AK140769|Kif5a|16572|kinesin family member 5A	NM_001039000|Kif5a|16572|kinesin family member 5A	NM_008447|Kif5a|16572|kinesin family member 5A
mm9_v1_chr19_+_10463540_10463619	0.741289	AAAGUGC	NM_018801|Syt7|54525|synaptotagmin VII	NM_173067|Syt7|54525|synaptotagmin VII	NM_173068|Syt7|54525|synaptotagmin VII	AK080850|Syt7|54525|synaptotagmin VII
mm9_v1_chr11_-_106649652_106649810	0.735262	AAAGUGC	BC108369|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK203495|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129873|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129874|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC086320|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC046554|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	X65627|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC062916|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK044792|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK076018|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK088887|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK129022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK135173|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK166045|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	NM_007840|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr6_-_85324557_85324691	0.729757	AAAGUGC	BC141380|Rab11fip5|52055|RAB11 family interacting protein 5 (class I)	AK154922|Rab11fip5|52055|RAB11 family interacting protein 5 (class I)	AK129230|Rab11fip5|52055|RAB11 family interacting protein 5 (class I)	NM_001003955|Rab11fip5|52055|RAB11 family interacting protein 5 (class I)	NM_177466|Rab11fip5|52055|RAB11 family interacting protein 5 (class I)
mm9_v1_chr12_-_40764554_40764600	0.71402	AAAGUGC	NM_001039515|Arl4a|11861|ADP-ribosylation factor-like 4A	AK161281|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr3_+_95462640_95462703	0.711755	AAAGUGC	NM_008562|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr9_-_57315800_57315896	0.707199	AAAGUGC	AF241833|Scamp5|56807|secretory carrier membrane protein 5	BC018613|Scamp5|56807|secretory carrier membrane protein 5	NM_020270|Scamp5|56807|secretory carrier membrane protein 5
mm9_v1_chr6_-_113841356_113841375	0.706627	AAAGUGC	DQ406822|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK051287|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	BC075643|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	NM_001036684|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr10_+_95403283_95403412	0.698251	AAAGUGC	AK042055|Eea1|216238|early endosome antigen 1	NM_001001932|Eea1|216238|early endosome antigen 1	AK082278|Eea1|216238|early endosome antigen 1	AK163235|Eea1|216238|early endosome antigen 1	BC021363|Eea1|216238|early endosome antigen 1	BC075637|Eea1|216238|early endosome antigen 1	AK046231|Eea1|216238|early endosome antigen 1	AK040844|Eea1|216238|early endosome antigen 1
mm9_v1_chr19_+_27291507_27291624	0.697402	AAAGUGC	AK044683|Vldlr|22359|very low density lipoprotein receptor	AK076172|Vldlr|22359|very low density lipoprotein receptor	NM_001161420|Vldlr|22359|very low density lipoprotein receptor	NM_013703|Vldlr|22359|very low density lipoprotein receptor
mm9_v1_chr13_-_102538106_102538184	0.694608	AAAGUGC	M60651|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	U50413|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	BC026146|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK160493|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK171366|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	NM_001077495|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr18_+_32322742_32322855	0.690652	AAAGUGC	AK036364|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	NM_011946|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	AK143367|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	AK050667|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	U43186|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2
mm9_v1_chr7_-_31935974_31936116	0.688842	AAAGUGC	AK150032|Gramd1a|52857|GRAM domain containing 1A	AK150196|Gramd1a|52857|GRAM domain containing 1A	AK150837|Gramd1a|52857|GRAM domain containing 1A	AK151987|Gramd1a|52857|GRAM domain containing 1A	AK152294|Gramd1a|52857|GRAM domain containing 1A	AK083837|Gramd1a|52857|GRAM domain containing 1A	AK004885|Gramd1a|52857|GRAM domain containing 1A	AK154821|Gramd1a|52857|GRAM domain containing 1A	NM_027898|Gramd1a|52857|GRAM domain containing 1A
mm9_v1_chr14_-_67487226_67487503	0.68655	AAAGUGC	Y10339|Dpysl2|12934|dihydropyrimidinase-like 2	X87242|Dpysl2|12934|dihydropyrimidinase-like 2	BC062955|Dpysl2|12934|dihydropyrimidinase-like 2	NM_009955|Dpysl2|12934|dihydropyrimidinase-like 2
mm9_v1_chr18_+_37133455_37133703	0.685611	AAAGUGC	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chr7_-_17200285_17200343	0.682372	AAAGUGC	BC139459|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	BC139461|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	AK147326|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	AK147688|Grlf1|232906|glucocorticoid receptor DNA binding factor 1	NM_172739|Grlf1|232906|glucocorticoid receptor DNA binding factor 1
mm9_v1_chr6_-_149050201_149050210	0.680117	AAAGUGC	NM_177192|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr11_-_50024275_50024312	0.679906	AAAGUGC	U57413|Sqstm1|18412|sequestosome 1	NM_011018|Sqstm1|18412|sequestosome 1	U40930|Sqstm1|18412|sequestosome 1
mm9_v1_chr2_+_32462471_32462603	0.677061	AAAGUGC	NM_001025310|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	NM_016973|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	AK157562|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	AK159158|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	BC036985|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	AB035123|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	BC022924|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm9_v1_chr19_+_32832002_32832163	0.676661	AAAGUGC	NM_008960|Pten|19211|phosphatase and tensin homolog	AK164302|Pten|19211|phosphatase and tensin homolog	AK088717|Pten|19211|phosphatase and tensin homolog	AK076980|Pten|19211|phosphatase and tensin homolog
mm9_v1_chr11_+_70376359_70376411	0.674279	AAAGUGC	NM_001045959|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_001045964|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_016713|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_176893|Mink1|50932|misshapen-like kinase 1 (zebrafish)	AB035697|Mink1|50932|misshapen-like kinase 1 (zebrafish)	AB041925|Mink1|50932|misshapen-like kinase 1 (zebrafish)
mm9_v1_chr2_-_136213509_136213702	0.657758	AAAGUGC	AK163530|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK032593|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK079080|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK013814|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	BC099417|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK077967|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	NM_172858|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7
mm9_v1_chr7_-_118226515_118226580	0.657028	AAAGUGC	AK150745|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2	AK151637|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2	AK144309|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2	U76112|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2	BC057673|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2	BC127064|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2	NM_001040131|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2	NM_013507|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2
mm9_v1_chr8_-_124102548_124102765	0.65693	AAAGUGC	AB041586|Fbxo31|76454|F-box protein 31	AK163641|Fbxo31|76454|F-box protein 31	BC026929|Fbxo31|76454|F-box protein 31	AK140412|Fbxo31|76454|F-box protein 31	NM_133765|Fbxo31|76454|F-box protein 31
mm9_v1_chr7_+_129210684_129210770	0.649107	AAAGUGC	AK077395|Ubfd1|28018|ubiquitin family domain containing 1	NM_138589|Ubfd1|28018|ubiquitin family domain containing 1	BC011313|Ubfd1|28018|ubiquitin family domain containing 1	AK033428|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chrX_+_90920450_90920749	0.648092	AAAGUGC	NM_211138|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	BC048917|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189949|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK032027|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chrX_+_45265614_45265652	0.644272	AAAGUGC	AK047906|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK035315|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK041963|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK044320|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK138269|Ocrl|320634|oculocerebrorenal syndrome of Lowe	BC068146|Ocrl|320634|oculocerebrorenal syndrome of Lowe	NM_177215|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK028306|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK044488|Ocrl|320634|oculocerebrorenal syndrome of Lowe
mm9_v1_chr18_-_6135924_6136095	0.630885	AAAGUGC	AK031648|Arhgap12|75415|Rho GTPase activating protein 12	AK012717|Arhgap12|75415|Rho GTPase activating protein 12	AK077063|Arhgap12|75415|Rho GTPase activating protein 12	NM_001039692|Arhgap12|75415|Rho GTPase activating protein 12	NM_029277|Arhgap12|75415|Rho GTPase activating protein 12
mm9_v1_chr18_-_46372017_46372260	0.62869	AAAGUGC	AY251389|Trim36|28105|tripartite motif-containing 36	AB103063|Trim36|28105|tripartite motif-containing 36	BC058106|Trim36|28105|tripartite motif-containing 36	NM_178872|Trim36|28105|tripartite motif-containing 36
mm9_v1_chr6_-_113991945_113992108	0.621775	AAAGUGC	AK147240|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	DQ406821|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK147369|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK147501|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	NM_009723|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr2_+_127073631_127073743	0.621702	AAAGUGC	AK165880|Tmem127|69470|transmembrane protein 127	AK030324|Tmem127|69470|transmembrane protein 127	BC049832|Tmem127|69470|transmembrane protein 127	NM_175145|Tmem127|69470|transmembrane protein 127	AK050216|Tmem127|69470|transmembrane protein 127
mm9_v1_chrX_+_100551808_100551914	0.619805	AAAGUGC	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr15_+_41662472_41662583	0.61342	AAAGUGC	NM_001130164|Oxr1|170719|oxidation resistance 1	AK014186|3110047M12Rik|73184|RIKEN cDNA 3110047M12 gene
mm9_v1_chr8_+_109817355_109817761	0.610114	AAAGUGC	AK045123|Nfat5|54446|nuclear factor of activated T-cells 5	AK134022|Nfat5|54446|nuclear factor of activated T-cells 5	NM_018823|Nfat5|54446|nuclear factor of activated T-cells 5	NM_133957|Nfat5|54446|nuclear factor of activated T-cells 5	AK052632|Nfat5|54446|nuclear factor of activated T-cells 5	AF162853|Nfat5|54446|nuclear factor of activated T-cells 5	AK172011|Nfat5|54446|nuclear factor of activated T-cells 5	AF369980|Nfat5|54446|nuclear factor of activated T-cells 5	AF453571|Nfat5|54446|nuclear factor of activated T-cells 5
mm9_v1_chr17_-_80879792_80879792	0.605516	AAAGUGC	AK140310|Sos1|20662|son of sevenless homolog 1 (Drosophila)	NM_009231|Sos1|20662|son of sevenless homolog 1 (Drosophila)
mm9_v1_chr7_+_107855215_107855319	0.602248	AAAGUGC	BC079886|Fam168a|319604|family with sequence similarity 168, member A	NM_178764|Fam168a|319604|family with sequence similarity 168, member A	AK043356|Fam168a|319604|family with sequence similarity 168, member A	AK047153|Fam168a|319604|family with sequence similarity 168, member A	AK048559|Fam168a|319604|family with sequence similarity 168, member A	AK051453|Fam168a|319604|family with sequence similarity 168, member A	AK084931|Fam168a|319604|family with sequence similarity 168, member A	AK137424|Fam168a|319604|family with sequence similarity 168, member A
mm9_v1_chr13_-_46060325_46060353	0.597787	AAAGUGC	BC058178|Atxn1|20238|ataxin 1	AK048268|Atxn1|20238|ataxin 1	NM_009124|Atxn1|20238|ataxin 1	AK169931|Atxn1|20238|ataxin 1
mm9_v1_chr10_-_92773778_92773948	0.596273	AAAGUGC	Z32815|Elk3|13713|ELK3, member of ETS oncogene family	L19953|Elk3|13713|ELK3, member of ETS oncogene family	BC005686|Elk3|13713|ELK3, member of ETS oncogene family	NM_013508|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr2_-_92274110_92274239	0.595868	AAAGUGC	AB003433|Cry2|12953|cryptochrome 2 (photolyase-like)	AK172994|Cry2|12953|cryptochrome 2 (photolyase-like)	BC054794|Cry2|12953|cryptochrome 2 (photolyase-like)	BC066799|Cry2|12953|cryptochrome 2 (photolyase-like)	AK037778|Cry2|12953|cryptochrome 2 (photolyase-like)	AK041696|Cry2|12953|cryptochrome 2 (photolyase-like)	AF156987|Cry2|12953|cryptochrome 2 (photolyase-like)	AK133781|Cry2|12953|cryptochrome 2 (photolyase-like)	NM_001113333|Cry2|12953|cryptochrome 2 (photolyase-like)	NM_009963|Cry2|12953|cryptochrome 2 (photolyase-like)	AK051524|Cry2|12953|cryptochrome 2 (photolyase-like)
mm9_v1_chr15_+_88890140_88890179	0.595335	AAAGUGC	NM_001002005|Panx2|406218|pannexin 2	EU446266|Panx2|406218|pannexin 2
mm9_v1_chrX_-_159081510_159081550	0.590187	AAAGUGC	AY263368|Reps2|194590|RALBP1 associated Eps domain containing protein 2	NM_178256|Reps2|194590|RALBP1 associated Eps domain containing protein 2
mm9_v1_chr6_-_22306070_22306242	0.585039	AAAGUGC	AY424275|Fam3c|27999|family with sequence similarity 3, member C	BC009086|Fam3c|27999|family with sequence similarity 3, member C	NM_138587|Fam3c|27999|family with sequence similarity 3, member C	BC055853|Fam3c|27999|family with sequence similarity 3, member C	AK154498|Fam3c|27999|family with sequence similarity 3, member C	AK170887|Fam3c|27999|family with sequence similarity 3, member C	BC069880|Fam3c|27999|family with sequence similarity 3, member C
mm9_v1_chr3_-_55987612_55987634	0.581392	AAAGUGC	NM_030595|Nbea|26422|neurobeachin	Y18276|Nbea|26422|neurobeachin
mm9_v1_chr11_-_118216689_118216724	0.57943	AAAGUGC	NM_011594|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr17_-_66868909_66869045	0.579247	AAAGUGC	AB232607|Rab12|19328|RAB12, member RAS oncogene family	NM_024448|Rab12|19328|RAB12, member RAS oncogene family
mm9_v1_chr10_-_116585527_116585608	0.572674	AAAGUGC	BC043109|Frs2|327826|fibroblast growth factor receptor substrate 2	NM_177798|Frs2|327826|fibroblast growth factor receptor substrate 2	AK028813|Frs2|327826|fibroblast growth factor receptor substrate 2	AK163442|Frs2|327826|fibroblast growth factor receptor substrate 2	BC055334|Frs2|327826|fibroblast growth factor receptor substrate 2	AK138144|Frs2|327826|fibroblast growth factor receptor substrate 2
mm9_v1_chr8_+_85689250_85689250	0.569712	AAAGUGC	AK049049|Tbc1d9|71310|TBC1 domain family, member 9	NM_001111304|Tbc1d9|71310|TBC1 domain family, member 9	NM_027758|Tbc1d9|71310|TBC1 domain family, member 9
mm9_v1_chr5_-_3803095_3803144	0.559238	AAAGUGC	NM_001003909|Ankib1|70797|ankyrin repeat and IBR domain containing 1	AK014523|Ankib1|70797|ankyrin repeat and IBR domain containing 1
mm9_v1_chr17_+_78599556_78599594	0.549575	AAAGUGC	NM_015800|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr9_+_65756816_65756864	0.546546	AAAGUGC	AK090262|Csnk1g1|214897|casein kinase 1, gamma 1	NM_173185|Csnk1g1|214897|casein kinase 1, gamma 1	AK050473|Csnk1g1|214897|casein kinase 1, gamma 1	AK149310|Csnk1g1|214897|casein kinase 1, gamma 1
mm9_v1_chr8_-_41596638_41596711	0.541972	AAAGUGC	AK044535|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	NM_011135|Cnot7|18983|CCR4-NOT transcription complex, subunit 7
mm9_v1_chr6_-_92164804_92164868	0.537907	AAAGUGC	BC049106|Zfyve20|78287|zinc finger, FYVE domain containing 20	NM_030081|Zfyve20|78287|zinc finger, FYVE domain containing 20	AK019909|Zfyve20|78287|zinc finger, FYVE domain containing 20	BC017622|Zfyve20|78287|zinc finger, FYVE domain containing 20
mm9_v1_chr14_-_55496374_55496374	0.535101	AAAGUGC	NM_001167908|Ppp1r3e|105651|protein phosphatase 1, regulatory (inhibitor) subunit 3E
mm9_v1_chr2_-_180869796_180869941	0.53489	AAAGUGC	AF490773|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000494|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000495|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000496|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000497|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000498|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000499|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000500|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000501|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000502|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000503|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000504|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	BC145453|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001003824|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001003825|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006668|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006669|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006674|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006675|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006676|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006677|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006678|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006679|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006680|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_010611|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2
mm9_v1_chr6_+_143115732_143115821	0.533712	AAAGUGC	AK051039|Etnk1|75320|ethanolamine kinase 1	AK044502|Etnk1|75320|ethanolamine kinase 1	NM_029250|Etnk1|75320|ethanolamine kinase 1	AK016135|Etnk1|75320|ethanolamine kinase 1	AK031560|Etnk1|75320|ethanolamine kinase 1	AK033268|Etnk1|75320|ethanolamine kinase 1	AK164928|Etnk1|75320|ethanolamine kinase 1
mm9_v1_chr6_+_137200819_137200985	0.533351	AAAGUGC	NM_001164401|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	NM_011216|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	AK045929|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	AF135166|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	BC052743|Ptpro|19277|protein tyrosine phosphatase, receptor type, O
mm9_v1_chr8_+_3393005_3393067	0.521653	AAAGUGC	AK041423|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18	NM_133962|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18	BC060639|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18	AK147923|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18
mm9_v1_chr9_+_107904919_107905018	0.51908	AAAGUGC	AK172921|Ip6k1|27399|inositol hexaphosphate kinase 1	AK037925|Ip6k1|27399|inositol hexaphosphate kinase 1	AK088872|Ip6k1|27399|inositol hexaphosphate kinase 1	BC053030|Ip6k1|27399|inositol hexaphosphate kinase 1	AK171310|Ip6k1|27399|inositol hexaphosphate kinase 1	AK166143|Ip6k1|27399|inositol hexaphosphate kinase 1	BC059006|Ip6k1|27399|inositol hexaphosphate kinase 1	NM_013785|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr16_-_20621287_20621552	0.518305	AAAGUGC	AK013788|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147550|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147736|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147745|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC157896|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	NM_028420|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2
mm9_v1_chr18_+_37170365_37170627	0.51701	AAAGUGC	AK141960|Pcdha11|12942|protocadherin alpha 11	AK139436|Pcdha11|12942|protocadherin alpha 11	AK043705|Pcdha11|12942|protocadherin alpha 11	BC141349|Pcdha11|12942|protocadherin alpha 11	AY013758|Pcdha11|12942|protocadherin alpha 11	NM_009960|Pcdha11|12942|protocadherin alpha 11	AB008182|Pcdha11|12942|protocadherin alpha 11
mm9_v1_chr12_+_71926429_71926675	0.514476	AAAGUGC	BC053929|Frmd6|319710|FERM domain containing 6	NM_028127|Frmd6|319710|FERM domain containing 6	AK054457|Frmd6|319710|FERM domain containing 6
mm9_v1_chr15_-_31460752_31460820	0.512817	AAAGUGC	AK132461|March6|223455|membrane-associated ring finger (C3HC4) 6	AK089827|March6|223455|membrane-associated ring finger (C3HC4) 6	NM_172606|March6|223455|membrane-associated ring finger (C3HC4) 6
mm9_v1_chr17_+_27070071_27070094	0.512148	AAAGUGC	AK139088|Phf1|21652|PHD finger protein 1	NM_009343|Phf1|21652|PHD finger protein 1	AK155268|Phf1|21652|PHD finger protein 1	AK144793|Phf1|21652|PHD finger protein 1	AK076365|Phf1|21652|PHD finger protein 1
mm9_v1_chr16_-_85173944_85173969	0.508843	AAAGUGC	AK159245|App|11820|amyloid beta (A4) precursor protein	BC070409|App|11820|amyloid beta (A4) precursor protein	AK133639|App|11820|amyloid beta (A4) precursor protein	AK159352|App|11820|amyloid beta (A4) precursor protein	AK030583|App|11820|amyloid beta (A4) precursor protein	AK128971|App|11820|amyloid beta (A4) precursor protein	NM_001198823|App|11820|amyloid beta (A4) precursor protein	NM_001198824|App|11820|amyloid beta (A4) precursor protein	NM_001198825|App|11820|amyloid beta (A4) precursor protein	NM_001198826|App|11820|amyloid beta (A4) precursor protein	NM_007471|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr5_+_29895742_29895846	0.500008	AAAGUGC	AK046056|Ube3c|100763|ubiquitin protein ligase E3C	NM_133907|Ube3c|100763|ubiquitin protein ligase E3C	AK122187|Ube3c|100763|ubiquitin protein ligase E3C
mm9_v1_chr3_+_98186380_98186408	0.497672	AAAGUGC	AK034880|Zfp697|242109|zinc finger protein 697	AK086791|Zfp697|242109|zinc finger protein 697	NM_172863|Zfp697|242109|zinc finger protein 697
mm9_v1_chr11_+_98698077_98698100	0.496393	AAAGUGC	NM_001080925|Rapgefl1|268480|Rap guanine nucleotide exchange factor (GEF)-like 1
mm9_v1_chr14_+_45970767_45970937	0.496123	AAAGUGC	AK154136|Styx|56291|serine/threonine/tyrosine interaction protein	AK030122|Styx|56291|serine/threonine/tyrosine interaction protein	BC096674|Styx|56291|serine/threonine/tyrosine interaction protein	NM_019637|Styx|56291|serine/threonine/tyrosine interaction protein	AK166043|Styx|56291|serine/threonine/tyrosine interaction protein	AK046970|Styx|56291|serine/threonine/tyrosine interaction protein	AK042741|Styx|56291|serine/threonine/tyrosine interaction protein	U34973|Styx|56291|serine/threonine/tyrosine interaction protein	BC038608|Styx|56291|serine/threonine/tyrosine interaction protein	BC085089|Styx|56291|serine/threonine/tyrosine interaction protein	AK002822|Styx|56291|serine/threonine/tyrosine interaction protein
mm9_v1_chr12_+_85455277_85455306	0.495429	AAAGUGC	NM_028821|Dnalc1|105000|dynein, axonemal, light chain 1
mm9_v1_chr11_-_80593259_80593526	0.487133	AAAGUGC	AK188302|Myo1d|338367|myosin ID	AK203977|Myo1d|338367|myosin ID	BC150765|Myo1d|338367|myosin ID	AK037051|Myo1d|338367|myosin ID	AK049374|Myo1d|338367|myosin ID	NM_177390|Myo1d|338367|myosin ID
mm9_v1_chr8_-_86671651_86671718	0.486869	AAAGUGC	BC016188|Cc2d1a|212139|coiled-coil and C2 domain containing 1A	NM_145970|Cc2d1a|212139|coiled-coil and C2 domain containing 1A
mm9_v1_chr1_-_128389495_128389552	0.486068	AAAGUGC	BC066095|Nckap5|210356|NCK-associated protein 5	BC079551|Nckap5|210356|NCK-associated protein 5	NM_172484|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr9_+_121669121_121669172	0.482145	AAAGUGC	NM_001166644|Zfp651|270210|zinc finger protein 651
mm9_v1_chr10_-_79017835_79017849	0.478883	AAAGUGC	BC067013|Mier2|70427|mesoderm induction early response 1, family member 2	NM_027422|Mier2|70427|mesoderm induction early response 1, family member 2	AK154672|Mier2|70427|mesoderm induction early response 1, family member 2
mm9_v1_chr12_-_82881995_82882183	0.475244	AAAGUGC	AK053843|Map3k9|338372|mitogen-activated protein kinase kinase kinase 9	AK155677|Map3k9|338372|mitogen-activated protein kinase kinase kinase 9	NM_001174107|Map3k9|338372|mitogen-activated protein kinase kinase kinase 9	NM_177395|Map3k9|338372|mitogen-activated protein kinase kinase kinase 9
mm9_v1_chr4_+_119212261_119212343	0.468932	AAAGUGC	AK082840|Foxj3|230700|forkhead box J3	AK171564|Foxj3|230700|forkhead box J3	AK129271|Foxj3|230700|forkhead box J3	BC058231|Foxj3|230700|forkhead box J3	NM_172699|Foxj3|230700|forkhead box J3	AK133640|Foxj3|230700|forkhead box J3	AK163298|Foxj3|230700|forkhead box J3	AK086875|Foxj3|230700|forkhead box J3	AK139508|Foxj3|230700|forkhead box J3
mm9_v1_chr18_+_37105758_37105860	0.462138	AAAGUGC	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chr19_+_60831889_60831889	0.44761	AAAGUGC	BC085512|Nanos1|332397|nanos homolog 1 (Drosophila)	NM_178421|Nanos1|332397|nanos homolog 1 (Drosophila)
mm9_v1_chr4_+_107474842_107475017	0.441081	AAAGUGC	NM_001080926|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D85463|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC127061|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	AJ312058|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm9_v1_chr1_-_58642994_58643176	0.439883	AAAGUGC	AK052638|Fam126b|213056|family with sequence similarity 126, member B	BC068302|Fam126b|213056|family with sequence similarity 126, member B	AK144602|Fam126b|213056|family with sequence similarity 126, member B	BC049806|Fam126b|213056|family with sequence similarity 126, member B	AK168372|Fam126b|213056|family with sequence similarity 126, member B	NM_172513|Fam126b|213056|family with sequence similarity 126, member B
mm9_v1_chr4_-_114659706_114659870	0.429803	AAAGUGC	AK004827|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK146436|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK002526|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	BC017684|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK162173|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK150162|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	NM_025647|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK077534|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1
mm9_v1_chr19_+_17030600_17030608	0.423096	AAAGUGC	AK165582|Prune2|353211|prune homolog 2 (Drosophila)	AK020727|Prune2|353211|prune homolog 2 (Drosophila)	AK039241|Prune2|353211|prune homolog 2 (Drosophila)	AK165913|Prune2|353211|prune homolog 2 (Drosophila)	NM_181348|Prune2|353211|prune homolog 2 (Drosophila)
mm9_v1_chr2_-_11475555_11475702	0.421919	AAAGUGC	NM_001177758|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK138807|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm9_v1_chr10_+_36226612_36226726	0.421164	AAAGUGC	NM_001081208|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC147490|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC147493|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC150973|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC158004|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	AK086098|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
mm9_v1_chr8_-_108020769_108020996	0.415861	AAAGUGC	AK038593|Zdhhc1|70796|zinc finger, DHHC domain containing 1	NM_175160|Zdhhc1|70796|zinc finger, DHHC domain containing 1
mm9_v1_chr11_+_86940545_86940631	0.411705	AAAGUGC	AK140822|Trim37|68729|tripartite motif-containing 37	BC058678|Trim37|68729|tripartite motif-containing 37	NM_197987|Trim37|68729|tripartite motif-containing 37	BC078416|Trim37|68729|tripartite motif-containing 37	BC059070|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr15_+_95621222_95621461	0.411027	AAAGUGC	BC060732|Ano6|105722|anoctamin 6	NM_175344|Ano6|105722|anoctamin 6	AK159411|Ano6|105722|anoctamin 6	AK089300|Ano6|105722|anoctamin 6
mm9_v1_chr9_+_107465568_107465700	0.399025	AAAGUGC	AK082684|Tusc2|80385|tumor suppressor candidate 2	BC048477|Tusc2|80385|tumor suppressor candidate 2	NM_019742|Tusc2|80385|tumor suppressor candidate 2	AK004430|Tusc2|80385|tumor suppressor candidate 2	AF123387|Tusc2|80385|tumor suppressor candidate 2
mm9_v1_chr7_-_72301384_72301483	0.392779	AAAGUGC	NM_183087|Fam189a1|70638|family with sequence similarity 189, member A1
mm9_v1_chr17_+_43153490_43153503	0.380154	AAAGUGC	AK043823|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21	NM_178589|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21
mm9_v1_chr11_+_32542845_32542890	0.378949	AAAGUGC	AK166226|Fbxw11|103583|F-box and WD-40 domain protein 11	BC034261|Fbxw11|103583|F-box and WD-40 domain protein 11	NM_134015|Fbxw11|103583|F-box and WD-40 domain protein 11	AK178514|Fbxw11|103583|F-box and WD-40 domain protein 11	AK179454|Fbxw11|103583|F-box and WD-40 domain protein 11	AY038079|Fbxw11|103583|F-box and WD-40 domain protein 11
mm9_v1_chrX_+_139952975_139953253	0.37323	AAAGUGC	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chrX_+_136145155_136145229	0.368716	AAAGUGC	AB041548|Rnf128|66889|ring finger protein 128	AK004847|Rnf128|66889|ring finger protein 128	AK018582|Rnf128|66889|ring finger protein 128	NM_023270|Rnf128|66889|ring finger protein 128	AK146266|Rnf128|66889|ring finger protein 128	AY112656|Rnf128|66889|ring finger protein 128	AK167031|Rnf128|66889|ring finger protein 128	BC010477|Rnf128|66889|ring finger protein 128	AK008312|Rnf128|66889|ring finger protein 128
mm9_v1_chr16_-_85901362_85901374	0.364871	AAAGUGC	NM_011782|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr5_-_140865121_140865262	0.364035	AAAGUGC	AK045061|Snx8|231834|sorting nexin 8	AK082871|Snx8|231834|sorting nexin 8	AK148429|Snx8|231834|sorting nexin 8	NM_172277|Snx8|231834|sorting nexin 8	BC037599|Snx8|231834|sorting nexin 8
mm9_v1_chr8_-_48374755_48374779	0.358449	AAAGUGC	AK053894|Stox2|71069|storkhead box 2	NM_001114311|Stox2|71069|storkhead box 2
mm9_v1_chr2_+_153117135_153117203	0.358148	AAAGUGC	NM_008444|Kif3b|16569|kinesin family member 3B	AK147467|Kif3b|16569|kinesin family member 3B	AK083700|Kif3b|16569|kinesin family member 3B	AK148200|Kif3b|16569|kinesin family member 3B	BC065132|Kif3b|16569|kinesin family member 3B	AK122258|Kif3b|16569|kinesin family member 3B	AK081541|Kif3b|16569|kinesin family member 3B
mm9_v1_chr12_+_41172639_41172648	0.355346	AAAGUGC	AK043666|Dock4|238130|dedicator of cytokinesis 4	NM_172803|Dock4|238130|dedicator of cytokinesis 4
mm9_v1_chr15_+_40486577_40486623	0.350671	AAAGUGC	AK046521|Zfpm2|22762|zinc finger protein, multitype 2	NM_011766|Zfpm2|22762|zinc finger protein, multitype 2	AF125166|Zfpm2|22762|zinc finger protein, multitype 2
mm9_v1_chr7_+_107376116_107376219	0.35025	AAAGUGC	NM_027629|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK039189|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK040513|Pgm2l1|70974|phosphoglucomutase 2-like 1	BC076571|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr11_+_72503487_72503520	0.34821	AAAGUGC	BC139231|Ankfy1|11736|ankyrin repeat and FYVE domain containing 1	BC145583|Ankfy1|11736|ankyrin repeat and FYVE domain containing 1	NM_009671|Ankfy1|11736|ankyrin repeat and FYVE domain containing 1	AB011370|Ankfy1|11736|ankyrin repeat and FYVE domain containing 1	AB098329|Ankfy1|11736|ankyrin repeat and FYVE domain containing 1	AK134008|Ankfy1|11736|ankyrin repeat and FYVE domain containing 1
mm9_v1_chr2_-_37286367_37286438	0.345732	AAAGUGC	BC032933|Zbtb6|241322|zinc finger and BTB domain containing 6	AK044125|Zbtb6|241322|zinc finger and BTB domain containing 6	AK050827|Zbtb6|241322|zinc finger and BTB domain containing 6	NM_146253|Zbtb6|241322|zinc finger and BTB domain containing 6
mm9_v1_chr13_+_9275741_9275783	0.344738	AAAGUGC	NM_001081426|Dip2c|208440|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm9_v1_chr2_-_181327165_181327210	0.337865	AAAGUGC	AK129308|Znf512b|269401|zinc finger protein 512B	NM_001164597|Znf512b|269401|zinc finger protein 512B
mm9_v1_chr10_-_80204945_80204960	0.334957	AAAGUGC	BC037477|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	BC048786|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	BC022171|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	AB004305|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	NM_007460|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr11_-_103273956_103274013	0.334742	AAAGUGC	BC053079|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	NM_183034|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK155357|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK157752|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm9_v1_chr17_+_24686778_24686992	0.333202	AAAGUGC	BC099589|Pkd1|18763|polycystic kidney disease 1 homolog	NM_013630|Pkd1|18763|polycystic kidney disease 1 homolog	U70209|Pkd1|18763|polycystic kidney disease 1 homolog
mm9_v1_chr17_+_42452895_42453084	0.332193	AAAGUGC	NM_028474|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene	AK014270|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene	BC145294|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene
mm9_v1_chr11_-_88922061_88922089	0.328712	AAAGUGC	AK147841|Dgke|56077|diacylglycerol kinase, epsilon	NM_019505|Dgke|56077|diacylglycerol kinase, epsilon
mm9_v1_chr12_+_82732188_82732357	0.327772	AAAGUGC	AK172918|Ttc9|69480|tetratricopeptide repeat domain 9	BC028891|Ttc9|69480|tetratricopeptide repeat domain 9	AK133456|Ttc9|69480|tetratricopeptide repeat domain 9	NM_001033149|Ttc9|69480|tetratricopeptide repeat domain 9	BC139242|Ttc9|69480|tetratricopeptide repeat domain 9	BC139244|Ttc9|69480|tetratricopeptide repeat domain 9
mm9_v1_chr12_+_85792371_85792472	0.327446	AAAGUGC	BC120496|Lin52|217708|lin-52 homolog (C. elegans)	BC137693|Lin52|217708|lin-52 homolog (C. elegans)	AK030923|Lin52|217708|lin-52 homolog (C. elegans)	NM_173756|Lin52|217708|lin-52 homolog (C. elegans)
mm9_v1_chr2_-_102291924_102291996	0.318483	AAAGUGC	AK051097|Fjx1|14221|four jointed box 1 (Drosophila)	BC051990|Fjx1|14221|four jointed box 1 (Drosophila)	NM_010218|Fjx1|14221|four jointed box 1 (Drosophila)
mm9_v1_chrX_-_45561726_45561881	0.318263	AAAGUGC	BC042618|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK035745|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK079248|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032252|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032233|Zdhhc9|208884|zinc finger, DHHC domain containing 9	NM_172465|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr10_+_62442963_62442971	0.317937	AAAGUGC	AK045485|Rufy2|70432|RUN and FYVE domain-containing 2	NM_027425|Rufy2|70432|RUN and FYVE domain-containing 2
mm9_v1_chr5_-_147032932_147033023	0.312841	AAAGUGC	AY039004|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK049503|Rnf6|74132|ring finger protein (C3H2C3 type) 6	BC138545|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK004745|Rnf6|74132|ring finger protein (C3H2C3 type) 6	NM_028774|Rnf6|74132|ring finger protein (C3H2C3 type) 6
mm9_v1_chrX_+_148613496_148613589	0.309667	AAAGUGC	AK155453|Iqsec2|245666|IQ motif and Sec7 domain 2	NM_001005475|Iqsec2|245666|IQ motif and Sec7 domain 2
mm9_v1_chr19_-_6915038_6915131	0.307992	AAAGUGC	AK195314|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AF074714|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	NM_019924|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK089467|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK154674|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	BC012964|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4
mm9_v1_chr9_-_97011440_97011575	0.307601	AAAGUGC	BC008171|Slc25a36|192287|solute carrier family 25, member 36	AK078779|Slc25a36|192287|solute carrier family 25, member 36	NM_138756|Slc25a36|192287|solute carrier family 25, member 36	AK042075|Slc25a36|192287|solute carrier family 25, member 36	AK053646|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr9_-_96789818_96789892	0.304039	AAAGUGC	AK164254|Acpl2|235534|acid phosphatase-like 2	AK083712|Acpl2|235534|acid phosphatase-like 2	BC023960|Acpl2|235534|acid phosphatase-like 2	BC036342|Acpl2|235534|acid phosphatase-like 2	NM_153420|Acpl2|235534|acid phosphatase-like 2	AK043758|Acpl2|235534|acid phosphatase-like 2	AK082059|Acpl2|235534|acid phosphatase-like 2	AK084605|Acpl2|235534|acid phosphatase-like 2	AK144699|Acpl2|235534|acid phosphatase-like 2	AK036973|Acpl2|235534|acid phosphatase-like 2
mm9_v1_chr16_+_94792513_94792513	0.302079	AAAGUGC	NM_001113389|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr14_-_48188088_48188108	0.297224	AAAGUGC	AK029330|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	AK029967|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	BC090995|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	AK054196|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	NM_172599|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)
mm9_v1_chr5_-_37380147_37380223	0.295354	AAAGUGC	AJ011971|Wfs1|22393|Wolfram syndrome 1 homolog (human)	AF084482|Wfs1|22393|Wolfram syndrome 1 homolog (human)	BC046988|Wfs1|22393|Wolfram syndrome 1 homolog (human)	AK144561|Wfs1|22393|Wolfram syndrome 1 homolog (human)	AK170180|Wfs1|22393|Wolfram syndrome 1 homolog (human)	AK145023|Wfs1|22393|Wolfram syndrome 1 homolog (human)	NM_011716|Wfs1|22393|Wolfram syndrome 1 homolog (human)
mm9_v1_chr12_+_81745188_81745226	0.294318	AAAGUGC	NM_026244|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK090062|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK080462|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	BC072655|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK008025|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr8_+_93352723_93352742	0.292334	AAAGUGC	AK034446|Chd9|109151|chromodomain helicase DNA binding protein 9	NM_177224|Chd9|109151|chromodomain helicase DNA binding protein 9	AK039562|Chd9|109151|chromodomain helicase DNA binding protein 9	DQ127229|Chd9|109151|chromodomain helicase DNA binding protein 9
mm9_v1_chr10_+_93977597_93977699	0.292265	AAAGUGC	NM_172051|Tmcc3|319880|transmembrane and coiled coil domains 3	AK132545|Tmcc3|319880|transmembrane and coiled coil domains 3	BC095951|Tmcc3|319880|transmembrane and coiled coil domains 3	AK083129|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr9_-_101154160_101154163	0.291012	AAAGUGC	NM_001161362|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr10_-_75807976_75808035	0.290132	AAAGUGC	AK052899|Dip2a|64451|DIP2 disco-interacting protein 2 homolog A (Drosophila)	NM_001081419|Dip2a|64451|DIP2 disco-interacting protein 2 homolog A (Drosophila)	AK050040|Dip2a|64451|DIP2 disco-interacting protein 2 homolog A (Drosophila)
mm9_v1_chr10_-_42198203_42198370	0.28914	AAAGUGC	AF520417|Lace1|215951|lactation elevated 1	AK170996|Lace1|215951|lactation elevated 1	BC089595|Lace1|215951|lactation elevated 1	AK044595|Lace1|215951|lactation elevated 1	NM_145743|Lace1|215951|lactation elevated 1
mm9_v1_chr7_-_105805050_105805106	0.284973	AAAGUGC	BC066050|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	BC039956|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	BC089304|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	NM_172280|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	AK032985|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene
mm9_v1_chr8_-_129117310_129117573	0.283579	AAAGUGC	NM_001164598|Irf2bp2|270110|interferon regulatory factor 2 binding protein 2
mm9_v1_chr18_+_69504145_69504185	0.282617	AAAGUGC	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr18_-_38760921_38761068	0.282165	AAAGUGC	BC050944|Spry4|24066|sprouty homolog 4 (Drosophila)	BC057005|Spry4|24066|sprouty homolog 4 (Drosophila)	NM_011898|Spry4|24066|sprouty homolog 4 (Drosophila)	AK139816|Spry4|24066|sprouty homolog 4 (Drosophila)	AB019280|Spry4|24066|sprouty homolog 4 (Drosophila)	AK037180|Spry4|24066|sprouty homolog 4 (Drosophila)	AK048122|Spry4|24066|sprouty homolog 4 (Drosophila)	AF176906|Spry4|24066|sprouty homolog 4 (Drosophila)
mm9_v1_chr4_+_86520317_86520392	0.280462	AAAGUGC	BC059819|Acer2|230379|alkaline ceramidase 2	NM_139306|Acer2|230379|alkaline ceramidase 2	AK085306|Acer2|230379|alkaline ceramidase 2	AF282864|Acer2|230379|alkaline ceramidase 2	AY312515|Acer2|230379|alkaline ceramidase 2
mm9_v1_chr11_-_97436439_97436456	0.280221	AAAGUGC	AF040944|Srcin1|56013|SRC kinase signaling inhibitor 1	NM_018873|Srcin1|56013|SRC kinase signaling inhibitor 1	U59873|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr13_-_8870975_8870975	0.27941	AAAGUGC	NM_001039388|Wdr37|207615|WD repeat domain 37
mm9_v1_chr12_-_103151331_103151476	0.278957	AAAGUGC	AK077954|Trip11|109181|thyroid hormone receptor interactor 11	AK081763|Trip11|109181|thyroid hormone receptor interactor 11	AK014103|Trip11|109181|thyroid hormone receptor interactor 11	AK148294|Trip11|109181|thyroid hormone receptor interactor 11	AK012112|Trip11|109181|thyroid hormone receptor interactor 11	NM_028446|Trip11|109181|thyroid hormone receptor interactor 11	BC158098|Trip11|109181|thyroid hormone receptor interactor 11
mm9_v1_chr17_-_46169322_46169332	0.277592	AAAGUGC	NM_001025250|Vegfa|22339|vascular endothelial growth factor A	NM_001025257|Vegfa|22339|vascular endothelial growth factor A	NM_009505|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr1_+_6204729_6204756	0.275921	AAAGUGC	AB050017|Rb1cc1|12421|RB1-inducible coiled-coil 1	AB070619|Rb1cc1|12421|RB1-inducible coiled-coil 1	NM_009826|Rb1cc1|12421|RB1-inducible coiled-coil 1	AK020027|Rb1cc1|12421|RB1-inducible coiled-coil 1
mm9_v1_chr18_-_23200150_23200199	0.275778	AAAGUGC	AK006244|Nol4|319211|nucleolar protein 4	AK031008|Nol4|319211|nucleolar protein 4	NM_199024|Nol4|319211|nucleolar protein 4	AK005959|Nol4|319211|nucleolar protein 4
mm9_v1_chr3_-_153388047_153388152	0.27419	AAAGUGC	BC131987|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC132317|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC058387|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK034804|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_011372|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	Y11342|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm9_v1_chr3_+_157610182_157610429	0.271995	AAAGUGC	AK135906|Ankrd13c|433667|ankyrin repeat domain 13c	AK157542|Ankrd13c|433667|ankyrin repeat domain 13c	BC065088|Ankrd13c|433667|ankyrin repeat domain 13c	BC138991|Ankrd13c|433667|ankyrin repeat domain 13c	BC138992|Ankrd13c|433667|ankyrin repeat domain 13c	NM_001013806|Ankrd13c|433667|ankyrin repeat domain 13c
mm9_v1_chr5_+_74591336_74591350	0.267266	AAAGUGC	BC083068|Rasl11b|68939|RAS-like, family 11, member B	NM_026878|Rasl11b|68939|RAS-like, family 11, member B
mm9_v1_chr4_-_151235861_151235879	0.265977	AAAGUGC	AK158710|Camta1|100072|calmodulin binding transcription activator 1	NM_001081557|Camta1|100072|calmodulin binding transcription activator 1	NM_001195565|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr2_+_118727248_118727453	0.265844	AAAGUGC	NM_001045523|Bahd1|228536|bromo adjacent homology domain containing 1	AK152597|Bahd1|228536|bromo adjacent homology domain containing 1
mm9_v1_chr14_+_69647294_69647485	0.264782	AAAGUGC	AF099098|Stc1|20855|stanniocalcin 1	BC021425|Stc1|20855|stanniocalcin 1	AK134260|Stc1|20855|stanniocalcin 1	NM_009285|Stc1|20855|stanniocalcin 1	AK142220|Stc1|20855|stanniocalcin 1	AK149293|Stc1|20855|stanniocalcin 1	AK149351|Stc1|20855|stanniocalcin 1	AK161960|Stc1|20855|stanniocalcin 1
mm9_v1_chr16_+_78301923_78302076	0.264011	AAAGUGC	NM_001025192|Cxadr|13052|coxsackie virus and adenovirus receptor	NM_009988|Cxadr|13052|coxsackie virus and adenovirus receptor	AK004908|Cxadr|13052|coxsackie virus and adenovirus receptor	AK145569|Cxadr|13052|coxsackie virus and adenovirus receptor	AK160457|Cxadr|13052|coxsackie virus and adenovirus receptor	BC016457|Cxadr|13052|coxsackie virus and adenovirus receptor	BC004680|Cxadr|13052|coxsackie virus and adenovirus receptor	U90715|Cxadr|13052|coxsackie virus and adenovirus receptor	Y10320|Cxadr|13052|coxsackie virus and adenovirus receptor
mm9_v1_chr18_-_21458623_21458645	0.263492	AAAGUGC	AK220564|Fam59a|381126|family with sequence similarity 59, member A	AK148318|Fam59a|381126|family with sequence similarity 59, member A	NM_001033445|Fam59a|381126|family with sequence similarity 59, member A
mm9_v1_chr3_+_30501008_30501008	0.253099	AAAGUGC	BC065084|Mynn|80732|myoneurin	NM_030557|Mynn|80732|myoneurin
mm9_v1_chr18_+_37112301_37112419	0.252205	AAAGUGC	AK149282|Pcdha4|12936|protocadherin alpha 4	AK048980|Pcdha4|12936|protocadherin alpha 4	BC060211|Pcdha4|12936|protocadherin alpha 4	D86916|Pcdha4|12936|protocadherin alpha 4	NM_007766|Pcdha4|12936|protocadherin alpha 4	AF464180|Pcdha4-g|100384868|protocadherin alpha 4-gamma	NM_001174154|Pcdha4-g|100384868|protocadherin alpha 4-gamma	AY013762|Pcdha4|12936|protocadherin alpha 4
mm9_v1_chr1_+_62749850_62750115	0.249621	AAAGUGC	NM_001077403|Nrp2|18187|neuropilin 2	NM_001077404|Nrp2|18187|neuropilin 2	NM_001077405|Nrp2|18187|neuropilin 2	NM_001077406|Nrp2|18187|neuropilin 2	NM_001077407|Nrp2|18187|neuropilin 2	NM_010939|Nrp2|18187|neuropilin 2	AK149643|Nrp2|18187|neuropilin 2	AK051873|Nrp2|18187|neuropilin 2
mm9_v1_chrX_-_152057864_152057869	0.249207	AAAGUGC	BC116313|Ptchd1|211612|patched domain containing 1	BC116312|Ptchd1|211612|patched domain containing 1	NM_001093750|Ptchd1|211612|patched domain containing 1
mm9_v1_chr6_-_119798116_119798193	0.248531	AAAGUGC	AK053824|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	AK035989|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	AK048990|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	AF340028|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	AF340029|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	NM_053204|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	NM_178085|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1
mm9_v1_chr18_-_23197156_23197163	0.248377	AAAGUGC	BC056377|Nol4|319211|nucleolar protein 4	NM_001161483|Nol4|319211|nucleolar protein 4
mm9_v1_chr19_+_54018795_54018795	0.247455	AAAGUGC	BC083060|Shoc2|56392|soc-2 (suppressor of clear) homolog (C. elegans)	NM_001168505|Shoc2|56392|soc-2 (suppressor of clear) homolog (C. elegans)
mm9_v1_chr9_+_57408729_57408820	0.245661	AAAGUGC	AK003080|Scamp2|24044|secretory carrier membrane protein 2	AK161002|Scamp2|24044|secretory carrier membrane protein 2	NM_022813|Scamp2|24044|secretory carrier membrane protein 2	AF295402|Scamp2|24044|secretory carrier membrane protein 2	AK171766|Scamp2|24044|secretory carrier membrane protein 2	BC003452|Scamp2|24044|secretory carrier membrane protein 2	BC014751|Scamp2|24044|secretory carrier membrane protein 2
mm9_v1_chr9_-_44096170_44096326	0.242418	AAAGUGC	AY040865|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AF411084|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AJ426047|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AF425077|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	BC016200|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	AK043147|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4	NM_138955|Abcg4|192663|ATP-binding cassette, sub-family G (WHITE), member 4
mm9_v1_chr7_-_85722668_85722860	0.239484	AAAGUGC	AY336094|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_008746|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_182809|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	BC139764|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035399|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035400|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3
mm9_v1_chr16_-_92697567_92697590	0.236216	AAAGUGC	AK155262|Runx1|12394|runt related transcription factor 1	D26532|Runx1|12394|runt related transcription factor 1	NM_001111023|Runx1|12394|runt related transcription factor 1	NM_009821|Runx1|12394|runt related transcription factor 1
mm9_v1_chr5_-_102498929_102498975	0.233412	AAAGUGC	AK047077|Wdfy3|72145|WD repeat and FYVE domain containing 3	AY336569|Wdfy3|72145|WD repeat and FYVE domain containing 3	NM_172882|Wdfy3|72145|WD repeat and FYVE domain containing 3
mm9_v1_chr10_+_127814144_127814228	0.229043	AAAGUGC	AK144017|Ankrd52|237615|ankyrin repeat domain 52	AK032429|Ankrd52|237615|ankyrin repeat domain 52	NM_172790|Ankrd52|237615|ankyrin repeat domain 52	AK090124|Ankrd52|237615|ankyrin repeat domain 52	AK035533|Ankrd52|237615|ankyrin repeat domain 52	BC117907|Ankrd52|237615|ankyrin repeat domain 52	BC117908|Ankrd52|237615|ankyrin repeat domain 52
mm9_v1_chr6_-_39370351_39370385	0.227695	AAAGUGC	BC003329|Mkrn1|54484|makorin, ring finger protein, 1	AK077060|Mkrn1|54484|makorin, ring finger protein, 1	NM_018810|Mkrn1|54484|makorin, ring finger protein, 1	AF192785|Mkrn1|54484|makorin, ring finger protein, 1
mm9_v1_chr16_-_35769389_35769480	0.226606	AAAGUGC	BC037460|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK034214|Dirc2|224132|disrupted in renal carcinoma 2 (human)	NM_153550|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK172331|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr3_+_57539969_57539996	0.22538	AAAGUGC	NM_001113413|Rnf13|24017|ring finger protein 13	NM_011883|Rnf13|24017|ring finger protein 13	AK140682|Rnf13|24017|ring finger protein 13	AK008009|Rnf13|24017|ring finger protein 13	AK034135|Rnf13|24017|ring finger protein 13
mm9_v1_chr2_+_84890611_84890701	0.223523	AAAGUGC	NM_001081260|Tnks1bp1|228140|tankyrase 1 binding protein 1	BC150947|Tnks1bp1|228140|tankyrase 1 binding protein 1
mm9_v1_chr7_-_137663020_137663074	0.223182	AAAGUGC	BC050948|Ate1|11907|arginyltransferase 1	NM_001136054|Ate1|11907|arginyltransferase 1	AK167591|Ate1|11907|arginyltransferase 1	BC042601|Ate1|11907|arginyltransferase 1	NM_013799|Ate1|11907|arginyltransferase 1	AK148442|Ate1|11907|arginyltransferase 1
mm9_v1_chr2_-_6805937_6806041	0.220998	AAAGUGC	AK042749|Celf2|14007|CUGBP, Elav-like family member 2	AK164112|Celf2|14007|CUGBP, Elav-like family member 2	AK052102|Celf2|14007|CUGBP, Elav-like family member 2	AK135166|Celf2|14007|CUGBP, Elav-like family member 2	BC026856|Celf2|14007|CUGBP, Elav-like family member 2	AF090697|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110228|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160293|Celf2|14007|CUGBP, Elav-like family member 2	NM_010160|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr19_+_38911056_38911166	0.219201	AAAGUGC	AK172979|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	NM_145952|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138056|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138057|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC145129|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12
mm9_v1_chr2_+_90585526_90585673	0.213834	AAAGUGC	NM_018828|Fnbp4|55935|formin binding protein 4	U40750|Fnbp4|55935|formin binding protein 4
mm9_v1_chr7_+_80520360_80520429	0.212963	AAAGUGC	AK082560|Rgma|244058|RGM domain family, member A	BC059072|Rgma|244058|RGM domain family, member A	NM_177740|Rgma|244058|RGM domain family, member A
mm9_v1_chr5_+_114185777_114185845	0.212387	AAAGUGC	NM_001010825|Ficd|231630|FIC domain containing	AK087477|Ficd|231630|FIC domain containing	BC106090|Ficd|231630|FIC domain containing
mm9_v1_chr6_-_53018566_53018625	0.208517	AAAGUGC	AK043767|Jazf1|231986|JAZF zinc finger 1	AK050474|Jazf1|231986|JAZF zinc finger 1	NM_173406|Jazf1|231986|JAZF zinc finger 1
mm9_v1_chr16_+_33380860_33381006	0.19965	AAAGUGC	NM_011749|Zfp148|22661|zinc finger protein 148	AF316548|Zfp148|22661|zinc finger protein 148	X98096|Zfp148|22661|zinc finger protein 148	BC026144|Zfp148|22661|zinc finger protein 148
mm9_v1_chr5_-_148537561_148537595	0.196796	AAAGUGC	X78568|Flt1|14254|FMS-like tyrosine kinase 1	D88689|Flt1|14254|FMS-like tyrosine kinase 1	D88690|Flt1|14254|FMS-like tyrosine kinase 1	NM_010228|Flt1|14254|FMS-like tyrosine kinase 1	AK005502|Flt1|14254|FMS-like tyrosine kinase 1	AK013236|Flt1|14254|FMS-like tyrosine kinase 1	AK167596|Flt1|14254|FMS-like tyrosine kinase 1	AK146906|Flt1|14254|FMS-like tyrosine kinase 1
mm9_v1_chrX_-_101176600_101176631	0.196683	AAAGUGC	AK013207|Rlim|19820|ring finger protein, LIM domain interacting	AK029295|Rlim|19820|ring finger protein, LIM domain interacting	AK163276|Rlim|19820|ring finger protein, LIM domain interacting	NM_011276|Rlim|19820|ring finger protein, LIM domain interacting
mm9_v1_chr2_-_11423673_11423729	0.195942	AAAGUGC	BC052400|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	AK054285|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	NM_001177752|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	NM_001177753|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	NM_001177754|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	NM_001177755|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	NM_001177756|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	NM_001177757|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	NM_133232|Pfkfb3|170768|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm9_v1_chrX_-_71330931_71331012	0.194289	AAAGUGC	AF158181|Mecp2|17257|methyl CpG binding protein 2	NM_010788|Mecp2|17257|methyl CpG binding protein 2	AK041453|Mecp2|17257|methyl CpG binding protein 2	BC027153|Mecp2|17257|methyl CpG binding protein 2	AK158664|Mecp2|17257|methyl CpG binding protein 2	NM_001081979|Mecp2|17257|methyl CpG binding protein 2
mm9_v1_chr9_-_44689356_44689381	0.191731	AAAGUGC	NM_001081049|Mll1|214162|myeloid/lymphoid or mixed-lineage leukemia 1
mm9_v1_chr7_-_134028480_134028480	0.191347	AAAGUGC	NM_001163774|Taok2|381921|TAO kinase 2	NM_001163775|Taok2|381921|TAO kinase 2
mm9_v1_chr2_+_4322020_4322021	0.191268	AAAGUGC	BC082808|Frmd4a|209630|FERM domain containing 4A	NM_001177843|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr9_-_66767436_66767566	0.191145	AAAGUGC	AB232601|Rab8b|235442|RAB8B, member RAS oncogene family	AK031251|Rab8b|235442|RAB8B, member RAS oncogene family	BC157974|Rab8b|235442|RAB8B, member RAS oncogene family	AK051218|Rab8b|235442|RAB8B, member RAS oncogene family	AK084650|Rab8b|235442|RAB8B, member RAS oncogene family	AK155621|Rab8b|235442|RAB8B, member RAS oncogene family	BC059208|Rab8b|235442|RAB8B, member RAS oncogene family	NM_173413|Rab8b|235442|RAB8B, member RAS oncogene family
mm9_v1_chr19_-_46470175_46470258	0.190533	AAAGUGC	BC007131|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK010632|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AB010297|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_016860|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK019518|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK168889|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK088062|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK167450|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK162248|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
mm9_v1_chr9_-_99469275_99469317	0.190378	AAAGUGC	BC038866|Armc8|74125|armadillo repeat containing 8	AK004793|Armc8|74125|armadillo repeat containing 8	NM_001166138|Armc8|74125|armadillo repeat containing 8	NM_028768|Armc8|74125|armadillo repeat containing 8
mm9_v1_chr16_-_3872273_3872373	0.189984	AAAGUGC	AK016727|Zfp597|71063|zinc finger protein 597	NM_001033159|Zfp597|71063|zinc finger protein 597
mm9_v1_chr12_-_32635399_32635399	0.185299	AAAGUGC	AK133127|Hbp1|73389|high mobility group box transcription factor 1	NM_153198|Hbp1|73389|high mobility group box transcription factor 1	NM_177993|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr8_+_11758322_11758364	0.182946	AAAGUGC	NM_001113518|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	NM_017402|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	BC044838|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AK052545|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AY220301|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)
mm9_v1_chr19_+_29441927_29441979	0.182869	AAAGUGC	NM_021893|Cd274|60533|CD274 antigen	BC066841|Cd274|60533|CD274 antigen	AK080003|Cd274|60533|CD274 antigen	AK154403|Cd274|60533|CD274 antigen	AK089307|Cd274|60533|CD274 antigen
mm9_v1_chr5_+_8422837_8422987	0.180283	AAAGUGC	AK044260|Slc25a40|319653|solute carrier family 25, member 40	AK045863|Slc25a40|319653|solute carrier family 25, member 40	NM_178766|Slc25a40|319653|solute carrier family 25, member 40	AK044862|Slc25a40|319653|solute carrier family 25, member 40	AK136770|Slc25a40|319653|solute carrier family 25, member 40	AK163037|Slc25a40|319653|solute carrier family 25, member 40	AK088444|Slc25a40|319653|solute carrier family 25, member 40	AK079538|Slc25a40|319653|solute carrier family 25, member 40	AK084797|Slc25a40|319653|solute carrier family 25, member 40	BC083103|Slc25a40|319653|solute carrier family 25, member 40
mm9_v1_chr11_+_49660238_49660298	0.179663	AAAGUGC	NM_001163671|Mapk9|26420|mitogen-activated protein kinase 9	NM_001163672|Mapk9|26420|mitogen-activated protein kinase 9	NM_016961|Mapk9|26420|mitogen-activated protein kinase 9	NM_207692|Mapk9|26420|mitogen-activated protein kinase 9	AK031959|Mapk9|26420|mitogen-activated protein kinase 9	AK090057|Mapk9|26420|mitogen-activated protein kinase 9	AK145083|Mapk9|26420|mitogen-activated protein kinase 9	BC028341|Mapk9|26420|mitogen-activated protein kinase 9
mm9_v1_chr8_+_91220921_91220958	0.179649	AAAGUGC	NM_001128170|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_001128171|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_173369|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_001128169|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK122389|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK147204|Cyld|74256|cylindromatosis (turban tumor syndrome)
mm9_v1_chr13_+_64263131_64263227	0.177357	AAAGUGC	AK016800|Habp4|56541|hyaluronic acid binding protein 4	BC082806|Habp4|56541|hyaluronic acid binding protein 4	NM_019986|Habp4|56541|hyaluronic acid binding protein 4	AK144206|Habp4|56541|hyaluronic acid binding protein 4	AK146525|Habp4|56541|hyaluronic acid binding protein 4	AF227684|Habp4|56541|hyaluronic acid binding protein 4
mm9_v1_chr2_-_23427476_23427627	0.177327	AAAGUGC	AK162056|Spopl|76857|speckle-type POZ protein-like	BC111867|Spopl|76857|speckle-type POZ protein-like	AK157283|Spopl|76857|speckle-type POZ protein-like	NM_001165997|Spopl|76857|speckle-type POZ protein-like	NM_001165998|Spopl|76857|speckle-type POZ protein-like	NM_029773|Spopl|76857|speckle-type POZ protein-like
mm9_v1_chr4_-_57314708_57314708	0.175515	AAAGUGC	AK052928|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3	NM_011207|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3
mm9_v1_chr8_-_26864721_26864754	0.174931	AAAGUGC	AK008529|Ddhd2|72108|DDHD domain containing 2	AK196094|Ddhd2|72108|DDHD domain containing 2	NM_028102|Ddhd2|72108|DDHD domain containing 2	AK039979|Ddhd2|72108|DDHD domain containing 2
mm9_v1_chr6_+_92041408_92041534	0.172358	AAAGUGC	NM_011630|Nr2c2|22026|nuclear receptor subfamily 2, group C, member 2	AK157305|Nr2c2|22026|nuclear receptor subfamily 2, group C, member 2
mm9_v1_chr9_-_65427840_65427883	0.172114	AAAGUGC	BC028908|Plekho2|102595|pleckstrin homology domain containing, family O member 2	NM_153119|Plekho2|102595|pleckstrin homology domain containing, family O member 2	AK170479|Plekho2|102595|pleckstrin homology domain containing, family O member 2	AK028069|Plekho2|102595|pleckstrin homology domain containing, family O member 2
mm9_v1_chr12_-_101963226_101963268	0.170809	AAAGUGC	AY341873|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	AY341881|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	BC035298|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	NM_153587|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5
mm9_v1_chr5_-_125870386_125870439	0.169987	AAAGUGC	NM_019639|Ubc|22190|ubiquitin C	AK004727|Ubc|22190|ubiquitin C
mm9_v1_chrX_+_148578716_148578819	0.160308	AAAGUGC	AB275281|Iqsec2|245666|IQ motif and Sec7 domain 2	NM_001114664|Iqsec2|245666|IQ motif and Sec7 domain 2	AY451401|Iqsec2|245666|IQ motif and Sec7 domain 2
mm9_v1_chr2_+_68699498_68699613	0.158286	AAAGUGC	AK081354|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK135798|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK151848|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK152417|Lass6|241447|LAG1 homolog, ceramide synthase 6	BC057629|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK028849|Lass6|241447|LAG1 homolog, ceramide synthase 6	NM_172856|Lass6|241447|LAG1 homolog, ceramide synthase 6
mm9_v1_chr13_-_112599181_112599204	0.155697	AAAGUGC	AB014614|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1	AF117340|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1	NM_011945|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1
mm9_v1_chr9_+_57385317_57385465	0.155246	AAAGUGC	AK028365|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_001166364|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_175273|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC111883|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC112403|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene
mm9_v1_chr14_-_78936606_78936676	0.152228	AAAGUGC	NM_001164503|Akap11|219181|A kinase (PRKA) anchor protein 11
mm9_v1_chr2_-_7317513_7317626	0.151024	AAAGUGC	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr11_-_74537877_74537918	0.15003	AAAGUGC	NM_013625|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm9_v1_chr5_+_30062437_30062485	0.149925	AAAGUGC	NM_001037940|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6	NM_001037941|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6	NM_001127367|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6	NM_011847|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6	AK134387|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6
mm9_v1_chr18_+_37164856_37165092	0.147966	AAAGUGC	BC079625|Pcdha10|12943|protocadherin alpha 10	AY013757|Pcdha10|12943|protocadherin alpha 10	NM_009961|Pcdha10|12943|protocadherin alpha 10	AB008178|Pcdha10|12943|protocadherin alpha 10
mm9_v1_chr2_+_121782185_121782265	0.145531	AAAGUGC	AK033382|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	NM_212450|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK169248|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK044805|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK053513|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC066219|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK030085|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK041422|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK049463|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK160431|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC052660|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm9_v1_chr7_+_104728398_104728430	0.144891	AAAGUGC	AK134242|Rsf1|233532|remodeling and spacing factor 1	NM_001081267|Rsf1|233532|remodeling and spacing factor 1	AK138087|Rsf1|233532|remodeling and spacing factor 1	AK146675|Rsf1|233532|remodeling and spacing factor 1	BC085127|Rsf1|233532|remodeling and spacing factor 1	AK146154|Rsf1|233532|remodeling and spacing factor 1	AK032853|Rsf1|233532|remodeling and spacing factor 1
mm9_v1_chr1_+_179374783_179374796	0.144302	AAAGUGC	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr10_+_69903653_69903701	0.140693	AAAGUGC	AK041147|Fam13c|71721|family with sequence similarity 13, member C	NM_001143776|Fam13c|71721|family with sequence similarity 13, member C	NM_024244|Fam13c|71721|family with sequence similarity 13, member C	AK082202|Fam13c|71721|family with sequence similarity 13, member C	AK004797|Fam13c|71721|family with sequence similarity 13, member C	BC129839|Fam13c|71721|family with sequence similarity 13, member C	BC129840|Fam13c|71721|family with sequence similarity 13, member C
mm9_v1_chr11_-_70501586_70501625	0.140302	AAAGUGC	NM_001190376|Camta2|216874|calmodulin binding transcription activator 2	NM_001190378|Camta2|216874|calmodulin binding transcription activator 2	NM_001190379|Camta2|216874|calmodulin binding transcription activator 2	NM_178116|Camta2|216874|calmodulin binding transcription activator 2
mm9_v1_chr7_+_86418127_86418181	0.133727	AAAGUGC	AK008690|Abhd2|54608|abhydrolase domain containing 2	AK053460|Abhd2|54608|abhydrolase domain containing 2	AK139526|Abhd2|54608|abhydrolase domain containing 2	NM_018811|Abhd2|54608|abhydrolase domain containing 2	AF546701|Abhd2|54608|abhydrolase domain containing 2	BC089477|Abhd2|54608|abhydrolase domain containing 2	AF201730|Abhd2|54608|abhydrolase domain containing 2	BC027098|Abhd2|54608|abhydrolase domain containing 2
mm9_v1_chr13_+_74146852_74146948	0.132857	AAAGUGC	NM_182839|Tppp|72948|tubulin polymerization promoting protein	AK141543|Tppp|72948|tubulin polymerization promoting protein	BC054803|Tppp|72948|tubulin polymerization promoting protein
mm9_v1_chr19_+_6241665_6241742	0.132781	AAAGUGC	NM_194348|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)	BC063264|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)	AK129132|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)
mm9_v1_chr18_+_37179802_37179999	0.131526	AAAGUGC	AY013759|Pcdha12|192164|protocadherin alpha 12	NM_138663|Pcdha12|192164|protocadherin alpha 12	AB008180|Pcdha12|192164|protocadherin alpha 12
mm9_v1_chr1_+_173259275_173259328	0.128061	AAAGUGC	NM_001128609|Dedd|21945|death effector domain-containing	NM_011615|Dedd|21945|death effector domain-containing	AK157609|Dedd|21945|death effector domain-containing
mm9_v1_chr14_-_46277816_46277821	0.12414	AAAGUGC	DQ272481|Ddhd1|114874|DDHD domain containing 1	DQ272482|Ddhd1|114874|DDHD domain containing 1	NM_001039106|Ddhd1|114874|DDHD domain containing 1	NM_001042719|Ddhd1|114874|DDHD domain containing 1	NM_176845|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr7_+_26067197_26067278	0.123746	AAAGUGC	AK147276|Cic|71722|capicua homolog (Drosophila)	NM_001110131|Cic|71722|capicua homolog (Drosophila)	NM_001110132|Cic|71722|capicua homolog (Drosophila)	NM_027882|Cic|71722|capicua homolog (Drosophila)
mm9_v1_chr3_-_57651621_57651757	0.122725	AAAGUGC	NM_019410|Pfn2|18645|profilin 2
mm9_v1_chr9_+_122026378_122026421	0.122282	AAAGUGC	NM_001164572|Snrk|20623|SNF related kinase	NM_133741|Snrk|20623|SNF related kinase
mm9_v1_chr14_-_65568677_65568719	0.122167	AAAGUGC	AK089782|Hmbox1|219150|homeobox containing 1	AK161592|Hmbox1|219150|homeobox containing 1	NM_177338|Hmbox1|219150|homeobox containing 1	BC051457|Hmbox1|219150|homeobox containing 1	AK052729|Hmbox1|219150|homeobox containing 1
mm9_v1_chr2_-_7002344_7002370	0.118868	AAAGUGC	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr9_-_62994774_62994817	0.114958	AAAGUGC	BC138063|Skor1|207667|SKI family transcriptional corepressor 1	AK049035|Skor1|207667|SKI family transcriptional corepressor 1	NM_172446|Skor1|207667|SKI family transcriptional corepressor 1	AK134840|Skor1|207667|SKI family transcriptional corepressor 1	AB185113|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163755|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163757|Skor1|207667|SKI family transcriptional corepressor 1
mm9_v1_chr5_+_120120671_120120725	0.112551	AAAGUGC	AK034758|Tbx3|21386|T-box 3	NM_011535|Tbx3|21386|T-box 3	NM_198052|Tbx3|21386|T-box 3	AK031708|Tbx3|21386|T-box 3
mm9_v1_chr11_+_51577152_51577250	0.111284	AAAGUGC	NM_025535|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK002327|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK155429|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC082550|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK150906|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC085178|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK013559|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)
mm9_v1_chr9_+_122260733_122260862	0.106278	AAAGUGC	NM_026179|Abhd5|67469|abhydrolase domain containing 5	AK028453|Abhd5|67469|abhydrolase domain containing 5	AK004873|Abhd5|67469|abhydrolase domain containing 5	AK007421|Abhd5|67469|abhydrolase domain containing 5	AK008046|Abhd5|67469|abhydrolase domain containing 5	AK019488|Abhd5|67469|abhydrolase domain containing 5	AK050377|Abhd5|67469|abhydrolase domain containing 5	AK152717|Abhd5|67469|abhydrolase domain containing 5	BC037063|Abhd5|67469|abhydrolase domain containing 5	BC080714|Abhd5|67469|abhydrolase domain containing 5
mm9_v1_chr4_-_147278927_147279021	0.105972	AAAGUGC	NM_133201|Mfn2|170731|mitofusin 2
mm9_v1_chr11_+_102146273_102146324	0.105725	AAAGUGC	AK132118|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	NM_028076|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	AK157408|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	BC016187|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	AK008158|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2
mm9_v1_chr1_-_63160764_63160840	0.104846	AAAGUGC	AK049468|Ino80d|227195|INO80 complex subunit D	NM_001081436|Ino80d|227195|INO80 complex subunit D	NM_001114609|Ino80d|227195|INO80 complex subunit D
mm9_v1_chr11_+_115891591_115891668	0.103737	AAAGUGC	AK077635|Unk|217331|unkempt homolog (Drosophila)	AK046395|Unk|217331|unkempt homolog (Drosophila)	NM_172569|Unk|217331|unkempt homolog (Drosophila)	AK078095|Unk|217331|unkempt homolog (Drosophila)	AK129438|Unk|217331|unkempt homolog (Drosophila)
mm9_v1_chr18_+_65183180_65183324	0.101947	AAAGUGC	NM_031881|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr18_-_82862111_82862127	0.0996221	AAAGUGC	BC138187|Zfp236|329002|zinc finger protein 236	BC145179|Zfp236|329002|zinc finger protein 236	BC145180|Zfp236|329002|zinc finger protein 236	NM_177832|Zfp236|329002|zinc finger protein 236
mm9_v1_chr10_-_119913990_119913990	0.0966989	AAAGUGC	NM_010441|Hmga2|15364|high mobility group AT-hook 2
mm9_v1_chr16_+_94791713_94791812	0.0966597	AAAGUGC	NM_007890|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr7_+_127821093_127821157	0.0945967	AAAGUGC	NM_001164580|BC030336|233812|cDNA sequence BC030336
mm9_v1_chr10_+_40603330_40603398	0.0940848	AAAGUGC	NM_031877|Wasf1|83767|WASP family 1	BC053423|Wasf1|83767|WASP family 1	BC016896|Wasf1|83767|WASP family 1
mm9_v1_chr6_+_83745021_83745052	0.0939052	AAAGUGC	AK007240|Nagk|56174|N-acetylglucosamine kinase	AK084646|Nagk|56174|N-acetylglucosamine kinase	AJ242909|Nagk|56174|N-acetylglucosamine kinase	NM_019542|Nagk|56174|N-acetylglucosamine kinase	AK089238|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chrX_+_68809163_68809181	0.0926543	AAAGUGC	NM_008253|Hmgb3|15354|high mobility group box 3	AK032163|Hmgb3|15354|high mobility group box 3
mm9_v1_chr12_-_99972803_99972854	0.0919712	AAAGUGC	D37801|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK013777|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK030456|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	NM_011877|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21
mm9_v1_chr5_-_76733540_76733585	0.091299	AAAGUGC	AF000998|Clock|12753|circadian locomotor output cycles kaput	NM_007715|Clock|12753|circadian locomotor output cycles kaput
mm9_v1_chr18_+_37120093_37120209	0.0907286	AAAGUGC	AY013763|Pcdha5|12941|protocadherin alpha 5	NM_009959|Pcdha5|12941|protocadherin alpha 5	AB008181|Pcdha5|12941|protocadherin alpha 5
mm9_v1_chr12_-_106923394_106923487	0.089729	AAAGUGC	AK085790|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	AK083213|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	BC062182|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	AK086802|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	NM_029654|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)
mm9_v1_chr17_-_14831262_14831287	0.0864614	AAAGUGC	NM_011581|Thbs2|21826|thrombospondin 2
mm9_v1_chr4_-_45097427_45097496	0.0847896	AAAGUGC	AK153358|Fbxo10|269529|F-box protein 10	BC054731|Fbxo10|269529|F-box protein 10	AK150292|Fbxo10|269529|F-box protein 10	AK142389|Fbxo10|269529|F-box protein 10	NM_001024142|Fbxo10|269529|F-box protein 10
mm9_v1_chr2_+_127161893_127161939	0.0845335	AAAGUGC	AK088059|Dusp2|13537|dual specificity phosphatase 2	AK134067|Dusp2|13537|dual specificity phosphatase 2	NM_010090|Dusp2|13537|dual specificity phosphatase 2	BC048696|Dusp2|13537|dual specificity phosphatase 2	L11330|Dusp2|13537|dual specificity phosphatase 2
mm9_v1_chr6_-_116143380_116143517	0.0845276	AAAGUGC	AK173022|Tmcc1|330401|transmembrane and coiled coil domains 1	NM_177412|Tmcc1|330401|transmembrane and coiled coil domains 1
mm9_v1_chr11_-_100800603_100800824	0.0836837	AAAGUGC	U06922|Stat3|20848|signal transducer and activator of transcription 3	AK145486|Stat3|20848|signal transducer and activator of transcription 3	U08378|Stat3|20848|signal transducer and activator of transcription 3	BC003806|Stat3|20848|signal transducer and activator of transcription 3	U30709|Stat3|20848|signal transducer and activator of transcription 3	BC019168|Stat3|20848|signal transducer and activator of transcription 3	AK153472|Stat3|20848|signal transducer and activator of transcription 3	AK153005|Stat3|20848|signal transducer and activator of transcription 3	L29278|Stat3|20848|signal transducer and activator of transcription 3	NM_011486|Stat3|20848|signal transducer and activator of transcription 3	NM_213659|Stat3|20848|signal transducer and activator of transcription 3	NM_213660|Stat3|20848|signal transducer and activator of transcription 3
mm9_v1_chr3_-_102008512_102008615	0.0825316	AAAGUGC	AK167743|Vangl1|229658|vang-like 1 (van gogh, Drosophila)	AF481860|Vangl1|229658|vang-like 1 (van gogh, Drosophila)	NM_177545|Vangl1|229658|vang-like 1 (van gogh, Drosophila)
mm9_v1_chr13_+_45485106_45485325	0.0796005	AAAGUGC	AK034887|Mylip|218203|myosin regulatory light chain interacting protein	AK159478|Mylip|218203|myosin regulatory light chain interacting protein	NM_153789|Mylip|218203|myosin regulatory light chain interacting protein	AK171888|Mylip|218203|myosin regulatory light chain interacting protein	BC010206|Mylip|218203|myosin regulatory light chain interacting protein	AY434449|Mylip|218203|myosin regulatory light chain interacting protein	NM_181043|Mylip|218203|myosin regulatory light chain interacting protein
mm9_v1_chr11_+_77499638_77499656	0.0784787	AAAGUGC	AK030113|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK160601|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	NM_001024205|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK170764|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK122494|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2
mm9_v1_chr5_-_44173238_44173428	0.0772574	AAAGUGC	AK183264|Fbxl5|242960|F-box and leucine-rich repeat protein 5	BC113798|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK029957|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK171361|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK150664|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK088067|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK054009|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK082931|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK041497|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK085100|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK159744|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK171783|Fbxl5|242960|F-box and leucine-rich repeat protein 5	NM_001159963|Fbxl5|242960|F-box and leucine-rich repeat protein 5	NM_178729|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chrX_-_75829120_75829237	0.0767059	AAAGUGC	BC032926|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	NM_001164275|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK008151|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK083396|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK135895|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK161802|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	NM_027322|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1
mm9_v1_chr8_-_71259021_71259065	0.0749391	AAAGUGC	BC089162|Csgalnact1|234356|chondroitin sulfate N-acetylgalactosaminyltransferase 1	NM_172753|Csgalnact1|234356|chondroitin sulfate N-acetylgalactosaminyltransferase 1
mm9_v1_chr8_-_73316331_73316346	0.0749003	AAAGUGC	NM_199308|Mast3|546071|microtubule associated serine/threonine kinase 3	AK140821|Mast3|546071|microtubule associated serine/threonine kinase 3
mm9_v1_chr1_+_136352075_136352146	0.0697421	AAAGUGC	AK034170|Klhl12|240756|kelch-like 12 (Drosophila)	AK165280|Klhl12|240756|kelch-like 12 (Drosophila)	BC034514|Klhl12|240756|kelch-like 12 (Drosophila)	NM_153128|Klhl12|240756|kelch-like 12 (Drosophila)
mm9_v1_chr9_+_75161942_75162049	0.0681616	AAAGUGC	AK169323|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK050564|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK148175|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	L34290|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	NM_138719|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5
mm9_v1_chr6_+_114593104_114593174	0.065317	AAAGUGC	AK007484|Atg7|74244|autophagy-related 7 (yeast)	NM_028835|Atg7|74244|autophagy-related 7 (yeast)	AK166023|Atg7|74244|autophagy-related 7 (yeast)	AK170769|Atg7|74244|autophagy-related 7 (yeast)	AK146992|Atg7|74244|autophagy-related 7 (yeast)	AK161133|Atg7|74244|autophagy-related 7 (yeast)	AK165653|Atg7|74244|autophagy-related 7 (yeast)	AK166074|Atg7|74244|autophagy-related 7 (yeast)	AK171968|Atg7|74244|autophagy-related 7 (yeast)	AK172272|Atg7|74244|autophagy-related 7 (yeast)	BC058597|Atg7|74244|autophagy-related 7 (yeast)
mm9_v1_chr18_+_7869164_7869355	0.0648407	AAAGUGC	NM_001146298|Wac|225131|WW domain containing adaptor with coiled-coil	NM_153085|Wac|225131|WW domain containing adaptor with coiled-coil	BC080851|Wac|225131|WW domain containing adaptor with coiled-coil
mm9_v1_chr4_-_86873866_86873867	0.0621023	AAAGUGC	NM_001110240|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC115867|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC116637|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr11_+_53583927_53584130	0.0617784	AAAGUGC	NM_001159396|Irf1|16362|interferon regulatory factor 1	BC003821|Irf1|16362|interferon regulatory factor 1
mm9_v1_chr8_+_81552335_81552485	0.0605735	AAAGUGC	BC094552|Zfp827|622675|zinc finger protein 827	NM_178267|Zfp827|622675|zinc finger protein 827	BC151183|Zfp827|622675|zinc finger protein 827	AK154905|Zfp827|622675|zinc finger protein 827
mm9_v1_chr2_-_37502738_37502804	0.0587733	AAAGUGC	X84692|Strbp|20744|spermatid perinuclear RNA binding protein	NM_009261|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr12_-_12948513_12948641	0.0586464	AAAGUGC	BC005453|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK144126|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146913|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146696|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_008709|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm9_v1_chr6_-_108135548_108135588	0.0584618	AAAGUGC	BC026981|Sumf1|58911|sulfatase modifying factor 1	AK160917|Sumf1|58911|sulfatase modifying factor 1	AK159192|Sumf1|58911|sulfatase modifying factor 1	AK161203|Sumf1|58911|sulfatase modifying factor 1	AK151874|Sumf1|58911|sulfatase modifying factor 1	NM_145937|Sumf1|58911|sulfatase modifying factor 1
mm9_v1_chr7_+_56214442_56214485	0.0570749	AAAGUGC	AK019901|Nav2|78286|neuron navigator 2	NM_001111016|Nav2|78286|neuron navigator 2	AK084063|Nav2|78286|neuron navigator 2	AK162444|Nav2|78286|neuron navigator 2
mm9_v1_chr5_-_90795190_90795275	0.0558837	AAAGUGC	AK031350|Ankrd17|81702|ankyrin repeat domain 17	NM_030886|Ankrd17|81702|ankyrin repeat domain 17	NM_198010|Ankrd17|81702|ankyrin repeat domain 17
mm9_v1_chr5_+_139729444_139729468	0.0537354	AAAGUGC	NM_001163316|Get4|67604|golgi to ER traffic protein 4 homolog (S. cerevisiae)	BC019557|Get4|67604|golgi to ER traffic protein 4 homolog (S. cerevisiae)
mm9_v1_chr11_-_69227176_69227176	0.0535334	AAAGUGC	NM_001017426|Kdm6b|216850|KDM1 lysine (K)-specific demethylase 6B
mm9_v1_chr7_+_130267398_130267398	0.0530387	AAAGUGC	NM_144925|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr11_+_69579376_69579461	0.0500222	AAAGUGC	AK163593|Zbtb4|75580|zinc finger and BTB domain containing 4	NM_029348|Zbtb4|75580|zinc finger and BTB domain containing 4	AK147212|Zbtb4|75580|zinc finger and BTB domain containing 4
mm9_v1_chr2_+_80478960_80478972	0.0487229	AAAGUGC	NM_027091|Nup35|69482|nucleoporin 35	AK089997|Nup35|69482|nucleoporin 35
mm9_v1_chr2_-_131855722_131855755	0.048165	AAAGUGC	NM_175445|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr11_-_55125758_55125758	0.0479513	AAAGUGC	NM_001029988|Fat2|245827|FAT tumor suppressor homolog 2 (Drosophila)
mm9_v1_chr2_+_22924561_22924686	0.0476341	AAAGUGC	NM_001102437|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_001102438|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK147839|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC053518|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC035202|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr8_-_83404377_83404428	0.0469771	AAAGUGC	BC007483|Gab1|14388|growth factor receptor bound protein 2-associated protein 1	NM_021356|Gab1|14388|growth factor receptor bound protein 2-associated protein 1	AK155423|Gab1|14388|growth factor receptor bound protein 2-associated protein 1	AK132176|Gab1|14388|growth factor receptor bound protein 2-associated protein 1
mm9_v1_chr9_-_62384846_62384857	0.038447	AAAGUGC	AK087414|Coro2b|235431|coronin, actin binding protein, 2B	NM_175484|Coro2b|235431|coronin, actin binding protein, 2B
mm9_v1_chr3_+_94176747_94176784	0.037712	AAAGUGC	NM_011281|Rorc|19885|RAR-related orphan receptor gamma	AK160122|Rorc|19885|RAR-related orphan receptor gamma	BC014804|Rorc|19885|RAR-related orphan receptor gamma	U43508|Rorc|19885|RAR-related orphan receptor gamma
mm9_v1_chr13_-_99585403_99585403	0.032579	AAAGUGC	AK031041|Fcho2|218503|FCH domain only 2	NM_172591|Fcho2|218503|FCH domain only 2
mm9_v1_chr8_+_107749072_107749302	0.0320228	AAAGUGC	AK156120|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	NM_145604|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC057919|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	AK051965|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	AK166937|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC066141|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC066826|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC006874|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene
mm9_v1_chr2_-_38920925_38921012	0.0319154	AAAGUGC	BC043090|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	NM_029793|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK028516|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC024637|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC053068|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK002954|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK008972|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK044987|Golga1|76899|golgi autoantigen, golgin subfamily a, 1
mm9_v1_chr19_+_3767420_3767525	0.0311248	AAAGUGC	AK083227|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167884|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167885|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167886|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167887|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167888|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167889|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_144871|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK087267|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm9_v1_chr14_-_70999625_70999666	0.0303407	AAAGUGC	NM_194345|Fam160b2|239170|family with sequence similarity 160, member B2	BC050861|Fam160b2|239170|family with sequence similarity 160, member B2
mm9_v1_chr18_+_12492494_12492679	0.0299728	AAAGUGC	AJ293592|Lama3|16774|laminin, alpha 3	NM_010680|Lama3|16774|laminin, alpha 3	U88353|Lama3|16774|laminin, alpha 3
mm9_v1_chr19_-_45857542_45857780	0.028592	AAAGUGC	AF132214|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	BC020093|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	BC054821|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	NM_023799|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)
mm9_v1_chr11_-_100981015_100981199	0.0279996	AAAGUGC	AK194930|Fam134c|67998|family with sequence similarity 134, member C	AK016648|Fam134c|67998|family with sequence similarity 134, member C	AK160000|Fam134c|67998|family with sequence similarity 134, member C	BC016089|Fam134c|67998|family with sequence similarity 134, member C	AK151685|Fam134c|67998|family with sequence similarity 134, member C	AK004979|Fam134c|67998|family with sequence similarity 134, member C	NM_026501|Fam134c|67998|family with sequence similarity 134, member C	AK163482|Fam134c|67998|family with sequence similarity 134, member C	AK004960|Fam134c|67998|family with sequence similarity 134, member C	AK051025|Fam134c|67998|family with sequence similarity 134, member C	NM_028933|Fam134c|67998|family with sequence similarity 134, member C
mm9_v1_chr17_+_29227908_29227961	0.0269148	AAAGUGC	NM_001111099|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr4_-_129317873_129317883	0.0265153	AAAGUGC	BC060227|Txlna|109658|taxilin alpha	BC065115|Txlna|109658|taxilin alpha	NM_001005506|Txlna|109658|taxilin alpha
mm9_v1_chr11_-_40506062_40506146	0.0253982	AAAGUGC	BC003457|Mat2b|108645|methionine adenosyltransferase II, beta	NM_134017|Mat2b|108645|methionine adenosyltransferase II, beta	AK038303|Mat2b|108645|methionine adenosyltransferase II, beta	AK153126|Mat2b|108645|methionine adenosyltransferase II, beta	AB070267|Mat2b|108645|methionine adenosyltransferase II, beta
mm9_v1_chr16_+_5884885_5884885	0.0246635	AAAGUGC	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr18_-_4352916_4352956	0.0233158	AAAGUGC	AK157123|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK140334|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK149624|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK149846|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	D13759|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	NM_007746|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK171403|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8
mm9_v1_chr9_-_41932371_41932387	0.0228499	AAAGUGC	AK147303|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing	NM_011436|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing
mm9_v1_chr15_-_38230397_38230491	0.0204193	AAAGUGC	BC003316|Klf10|21847|Kruppel-like factor 10	Z36270|Klf10|21847|Kruppel-like factor 10	AK154719|Klf10|21847|Kruppel-like factor 10	AF064088|Klf10|21847|Kruppel-like factor 10	AK043433|Klf10|21847|Kruppel-like factor 10	AK079679|Klf10|21847|Kruppel-like factor 10	AF049879|Klf10|21847|Kruppel-like factor 10	NM_013692|Klf10|21847|Kruppel-like factor 10	AK004906|Klf10|21847|Kruppel-like factor 10
mm9_v1_chr6_-_112897259_112897274	0.02026	AAAGUGC	AK045508|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	AK051262|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	NM_080448|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr12_-_3309887_3309978	0.0201715	AAAGUGC	AK134988|Rab10|19325|RAB10, member RAS oncogene family	AK150791|Rab10|19325|RAB10, member RAS oncogene family	AK153325|Rab10|19325|RAB10, member RAS oncogene family	BC052735|Rab10|19325|RAB10, member RAS oncogene family	BC056374|Rab10|19325|RAB10, member RAS oncogene family	AK160960|Rab10|19325|RAB10, member RAS oncogene family	AK150319|Rab10|19325|RAB10, member RAS oncogene family	AK153315|Rab10|19325|RAB10, member RAS oncogene family	AK159988|Rab10|19325|RAB10, member RAS oncogene family	AK168320|Rab10|19325|RAB10, member RAS oncogene family	AK087964|Rab10|19325|RAB10, member RAS oncogene family	AK159383|Rab10|19325|RAB10, member RAS oncogene family	AK159845|Rab10|19325|RAB10, member RAS oncogene family	AK028320|Rab10|19325|RAB10, member RAS oncogene family	AK166010|Rab10|19325|RAB10, member RAS oncogene family	AK045299|Rab10|19325|RAB10, member RAS oncogene family	AK008725|Rab10|19325|RAB10, member RAS oncogene family	AK146357|Rab10|19325|RAB10, member RAS oncogene family	NM_016676|Rab10|19325|RAB10, member RAS oncogene family
mm9_v1_chr6_-_137118238_137118241	0.0191901	AAAGUGC	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr11_+_98724908_98724950	0.015847	AAAGUGC	NM_197940|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr4_+_6118247_6118251	0.0154379	AAAGUGC	AK028268|Ubxn2b|68053|UBX domain protein 2B	AK018273|Ubxn2b|68053|UBX domain protein 2B	AK032332|Ubxn2b|68053|UBX domain protein 2B	BC076632|Ubxn2b|68053|UBX domain protein 2B	NM_026534|Ubxn2b|68053|UBX domain protein 2B
mm9_v1_chr15_-_81688686_81688755	0.0134449	AAAGUGC	BC094031|Tob2|57259|transducer of ERBB2, 2	BC021869|Tob2|57259|transducer of ERBB2, 2	AK049766|Tob2|57259|transducer of ERBB2, 2	AK080817|Tob2|57259|transducer of ERBB2, 2	AK143542|Tob2|57259|transducer of ERBB2, 2	AK037631|Tob2|57259|transducer of ERBB2, 2	AK044623|Tob2|57259|transducer of ERBB2, 2	NM_020507|Tob2|57259|transducer of ERBB2, 2
mm9_v1_chr12_+_33063653_33063723	0.0127262	AAAGUGC	NM_001162903|2010109K11Rik|72123|RIKEN cDNA 2010109K11 gene
mm9_v1_chr11_+_75401554_75401692	0.0119132	AAAGUGC	AK144618|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152089|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK153569|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK167760|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152874|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK165659|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168720|Pitpna|18738|phosphatidylinositol transfer protein, alpha	U96725|Pitpna|18738|phosphatidylinositol transfer protein, alpha	NM_008850|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK149745|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK151496|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168187|Pitpna|18738|phosphatidylinositol transfer protein, alpha	BC056171|Pitpna|18738|phosphatidylinositol transfer protein, alpha
mm9_v1_chr3_-_68930928_68931049	0.0107488	AAAGUGC	BC052162|Kpna4|16649|karyopherin (importin) alpha 4	NM_008467|Kpna4|16649|karyopherin (importin) alpha 4	AK147920|Kpna4|16649|karyopherin (importin) alpha 4
mm9_v1_chr3_-_142058595_142058659	0.0103707	AAAGUGC	AK147999|Pdlim5|56376|PDZ and LIM domain 5	AK003194|Pdlim5|56376|PDZ and LIM domain 5	AK089779|Pdlim5|56376|PDZ and LIM domain 5	NM_001190852|Pdlim5|56376|PDZ and LIM domain 5	NM_001190853|Pdlim5|56376|PDZ and LIM domain 5	NM_001190854|Pdlim5|56376|PDZ and LIM domain 5	NM_001190855|Pdlim5|56376|PDZ and LIM domain 5	NM_001190856|Pdlim5|56376|PDZ and LIM domain 5	NM_019808|Pdlim5|56376|PDZ and LIM domain 5	NM_019809|Pdlim5|56376|PDZ and LIM domain 5
mm9_v1_chr10_-_67375332_67375448	0.00973271	AAAGUGC	BC080272|Zfp365|216049|zinc finger protein 365	AK122387|Zfp365|216049|zinc finger protein 365	NM_178679|Zfp365|216049|zinc finger protein 365
mm9_v1_chr2_-_85036855_85036855	0.0095913	AAAGUGC	AK134968|Lrrc55|241528|leucine rich repeat containing 55	BC141221|Lrrc55|241528|leucine rich repeat containing 55	NM_001033346|Lrrc55|241528|leucine rich repeat containing 55
mm9_v1_chr15_-_31297286_31297513	0.00938532	AAAGUGC	AK089667|Ankrd33b|67434|ankyrin repeat domain 33B	AK170894|Ankrd33b|67434|ankyrin repeat domain 33B	AK017844|Ankrd33b|67434|ankyrin repeat domain 33B	AK002572|Ankrd33b|67434|ankyrin repeat domain 33B	AK012871|Ankrd33b|67434|ankyrin repeat domain 33B	AK156757|Ankrd33b|67434|ankyrin repeat domain 33B	BC100327|Ankrd33b|67434|ankyrin repeat domain 33B	NM_001164441|Ankrd33b|67434|ankyrin repeat domain 33B	NM_026153|Ankrd33b|67434|ankyrin repeat domain 33B	NM_027496|Ankrd33b|67434|ankyrin repeat domain 33B
mm9_v1_chr16_-_91597886_91597995	0.00901759	AAAGUGC	AK098154|Tmem50b|77975|transmembrane protein 50B	AK150773|Tmem50b|77975|transmembrane protein 50B	AK172335|Tmem50b|77975|transmembrane protein 50B	AK170684|Tmem50b|77975|transmembrane protein 50B	BC004841|Tmem50b|77975|transmembrane protein 50B	NM_030018|Tmem50b|77975|transmembrane protein 50B	AK020977|Tmem50b|77975|transmembrane protein 50B	AK152190|Tmem50b|77975|transmembrane protein 50B	AK152767|Tmem50b|77975|transmembrane protein 50B	AK133966|Tmem50b|77975|transmembrane protein 50B	AK151796|Tmem50b|77975|transmembrane protein 50B	AK155082|Tmem50b|77975|transmembrane protein 50B
mm9_v1_chr11_-_86171026_86171057	0.0088427	AAAGUGC	NM_001080931|Med13|327987|mediator complex subunit 13
mm9_v1_chr17_+_88929444_88929477	0.00802789	AAAGUGC	NM_028658|Klraq1|73825|KLRAQ motif containing 1
mm9_v1_chr8_+_85387234_85387370	0.00313022	AAAGUGC	AK032722|Rnf150|330812|ring finger protein 150	AK041412|Rnf150|330812|ring finger protein 150	NM_177378|Rnf150|330812|ring finger protein 150	AK220374|Rnf150|330812|ring finger protein 150
mm9_v1_chr15_+_102300972_102301062	0.00243435	AAAGUGC	NM_001103165|Pcbp2|18521|poly(rC) binding protein 2	NM_001103166|Pcbp2|18521|poly(rC) binding protein 2	NM_001174073|Pcbp2|18521|poly(rC) binding protein 2	NM_011042|Pcbp2|18521|poly(rC) binding protein 2
mm9_v1_chr17_+_26852581_26852657	0.00144447	AAAGUGC	AK030092|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	NM_029870|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK044760|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK020796|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132423|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132454|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
