mm9_v1_chrM_+_2750_2751	5.08075	ALX1.p2	
mm9_v1_chrM_+_11741_11742	4.74053	ALX1.p2	AK140457|ND5|17721|NADH dehydrogenase subunit 5
mm9_v1_chrM_+_3320_3438	4.49105	ALX1.p2	
mm9_v1_chrM_+_11812_11845	4.38883	ALX1.p2	
mm9_v1_chrM_+_3913_4410	3.5008	ALX1.p2	
mm9_v1_chrM_+_7714_7790	3.14533	ALX1.p2	AF093677|ATP6|17705|ATP synthase F0 subunit 6	BC069931|Gm10925|100191075|predicted gene 10925
mm9_v1_chrM_+_11027_11268	3.04909	ALX1.p2	
mm9_v1_chr7_-_111001598_111001720	2.83028	ALX1.p2	V00857|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	M26897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	BC057014|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK011619|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012501|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	NM_008221|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain
mm9_v1_chrM_+_9875_9905	1.87819	ALX1.p2	AK140187|ND4L|17720|NADH dehydrogenase subunit 4L	AK157367|ND4L|17720|NADH dehydrogenase subunit 4L	AK144853|ND4L|17720|NADH dehydrogenase subunit 4L	AK153747|ND4L|17720|NADH dehydrogenase subunit 4L
mm9_v1_chr18_-_75120759_75120936	1.5589	ALX1.p2	BC020991|Lipg|16891|lipase, endothelial	AF118768|Lipg|16891|lipase, endothelial	AK090224|Lipg|16891|lipase, endothelial	AK152430|Lipg|16891|lipase, endothelial	AK152161|Lipg|16891|lipase, endothelial	AK153541|Lipg|16891|lipase, endothelial	AK152872|Lipg|16891|lipase, endothelial	AK172101|Lipg|16891|lipase, endothelial	NM_010720|Lipg|16891|lipase, endothelial
mm9_v1_chr11_+_32176599_32176641	0.974262	ALX1.p2	NM_010405|Hba-x|15126|hemoglobin X, alpha-like embryonic chain in Hba complex	AK077590|Hba-x|15126|hemoglobin X, alpha-like embryonic chain in Hba complex	BC051988|Hba-x|15126|hemoglobin X, alpha-like embryonic chain in Hba complex	M26898|Hba-x|15126|hemoglobin X, alpha-like embryonic chain in Hba complex
mm9_v1_chrM_+_409_428	0.961342	ALX1.p2	
mm9_v1_chr9_+_96159123_96159160	0.951531	ALX1.p2	NM_001184709|Tfdp2|211586|transcription factor Dp 2	AK033356|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr16_-_84735425_84735537	0.932347	ALX1.p2	BC012274|Mrpl39|27393|mitochondrial ribosomal protein L39	NM_017404|Mrpl39|27393|mitochondrial ribosomal protein L39	AF239728|Mrpl39|27393|mitochondrial ribosomal protein L39	AK031942|Mrpl39|27393|mitochondrial ribosomal protein L39	BC016561|Mrpl39|27393|mitochondrial ribosomal protein L39	BC036276|Mrpl39|27393|mitochondrial ribosomal protein L39	AK007681|Mrpl39|27393|mitochondrial ribosomal protein L39
mm9_v1_chr3_+_94247220_94247297	0.849145	ALX1.p2	AK021196|Mrpl9|78523|mitochondrial ribosomal protein L9	AK161563|Mrpl9|78523|mitochondrial ribosomal protein L9	AK040055|Mrpl9|78523|mitochondrial ribosomal protein L9	AK162023|Mrpl9|78523|mitochondrial ribosomal protein L9	NM_030116|Mrpl9|78523|mitochondrial ribosomal protein L9	AK146237|Mrpl9|78523|mitochondrial ribosomal protein L9	AK046099|Mrpl9|78523|mitochondrial ribosomal protein L9	BC116385|Mrpl9|78523|mitochondrial ribosomal protein L9	BC116386|Mrpl9|78523|mitochondrial ribosomal protein L9	AB049637|Mrpl9|78523|mitochondrial ribosomal protein L9
mm9_v1_chr15_-_103045710_103045798	0.832692	ALX1.p2	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr11_+_29642059_29642120	0.799096	ALX1.p2	AK213159|Rtn4|68585|reticulon 4	AK218108|Rtn4|68585|reticulon 4
mm9_v1_chr13_+_24893310_24893891	0.786253	ALX1.p2	AK035718|BC005537|79555|cDNA sequence BC005537	NM_024473|BC005537|79555|cDNA sequence BC005537	AK078765|BC005537|79555|cDNA sequence BC005537	BC005537|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr15_+_102300902_102300971	0.740759	ALX1.p2	AK169268|Pcbp2|18521|poly(rC) binding protein 2
mm9_v1_chr3_-_130412360_130412367	0.739225	ALX1.p2	NM_025509|Ostc|66357|oligosaccharyltransferase complex subunit
mm9_v1_chr1_-_170085798_170085873	0.716296	ALX1.p2	AK080184|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK032161|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK043495|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK085198|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chrM_+_67_138	0.698036	ALX1.p2	
mm9_v1_chr1_+_176102903_176103041	0.594268	ALX1.p2	NM_011465|Spna1|20739|spectrin alpha 1	AK142860|Spna1|20739|spectrin alpha 1	U87455|Spna1|20739|spectrin alpha 1	AF093576|Spna1|20739|spectrin alpha 1	BC150747|Spna1|20739|spectrin alpha 1
mm9_v1_chrX_+_108009728_108009803	0.589191	ALX1.p2	BC138657|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC145919|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC052012|Pou3f4|18994|POU domain, class 3, transcription factor 4	X66603|Pou3f4|18994|POU domain, class 3, transcription factor 4	AK158302|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC086670|Pou3f4|18994|POU domain, class 3, transcription factor 4	NM_008901|Pou3f4|18994|POU domain, class 3, transcription factor 4
mm9_v1_chr15_+_102300972_102301062	0.58063	ALX1.p2	NM_001103165|Pcbp2|18521|poly(rC) binding protein 2	NM_001103166|Pcbp2|18521|poly(rC) binding protein 2	NM_001174073|Pcbp2|18521|poly(rC) binding protein 2	NM_011042|Pcbp2|18521|poly(rC) binding protein 2
mm9_v1_chrM_+_1091_1314	0.57229	ALX1.p2	
mm9_v1_chr12_+_78339071_78339134	0.552564	ALX1.p2	BC010666|Fut8|53618|fucosyltransferase 8	AK051811|Fut8|53618|fucosyltransferase 8
mm9_v1_chr7_-_106976715_106976926	0.551242	ALX1.p2	BC116892|Neu3|50877|neuraminidase 3	BC116924|Neu3|50877|neuraminidase 3	AK050428|Neu3|50877|neuraminidase 3	AK134405|Neu3|50877|neuraminidase 3	AB026842|Neu3|50877|neuraminidase 3	NM_016720|Neu3|50877|neuraminidase 3
mm9_v1_chr11_-_113545187_113545284	0.528824	ALX1.p2	AK158680|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	BC056429|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	BC089526|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	AK158872|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	BC060965|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	AK145119|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed
mm9_v1_chr2_+_174171943_174171964	0.497186	ALX1.p2	
mm9_v1_chr8_-_36028698_36028768	0.45282	ALX1.p2	BC057370|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	AK080913|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	NM_175091|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm9_v1_chr2_+_173563060_173563229	0.436153	ALX1.p2	BC048231|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	NM_019806|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	BC057123|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK050632|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK081908|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AF115504|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK160925|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK172080|Vapb|56491|vesicle-associated membrane protein, associated protein B and C
mm9_v1_chr2_+_44966657_44966746	0.418521	ALX1.p2	BC031611|Gm13476|433424|predicted gene 13476	NM_001177394|Gm13476|433424|predicted gene 13476
mm9_v1_chr19_-_25036047_25036105	0.403128	ALX1.p2	BC018472|Cbwd1|226043|COBW domain containing 1	AK076027|Cbwd1|226043|COBW domain containing 1	BC053745|Cbwd1|226043|COBW domain containing 1	AK132291|Cbwd1|226043|COBW domain containing 1	NM_146097|Cbwd1|226043|COBW domain containing 1
mm9_v1_chr15_-_51823107_51823255	0.394454	ALX1.p2	AK004746|Rad21|19357|RAD21 homolog (S. pombe)	AK128984|Rad21|19357|RAD21 homolog (S. pombe)	AK168896|Rad21|19357|RAD21 homolog (S. pombe)
mm9_v1_chr10_+_115580947_115580958	0.379885	ALX1.p2	Z30313|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr10_-_17742931_17743059	0.377506	ALX1.p2	BC039801|3110003A17Rik|73112|RIKEN cDNA 3110003A17 gene	AK171138|3110003A17Rik|73112|RIKEN cDNA 3110003A17 gene	BC098509|3110003A17Rik|73112|RIKEN cDNA 3110003A17 gene	AK013984|3110003A17Rik|73112|RIKEN cDNA 3110003A17 gene	NM_028440|3110003A17Rik|73112|RIKEN cDNA 3110003A17 gene
mm9_v1_chr15_-_76983985_76984241	0.370284	ALX1.p2	AF387322|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659951|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659952|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659953|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ017388|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ017389|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	BC002124|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AF229055|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AK044929|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110828|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110829|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110830|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr13_-_55201578_55201611	0.364656	ALX1.p2	BC051659|Uimc1|20184|ubiquitin interaction motif containing 1	BC066220|Uimc1|20184|ubiquitin interaction motif containing 1	AK083342|Uimc1|20184|ubiquitin interaction motif containing 1	BC037092|Uimc1|20184|ubiquitin interaction motif containing 1	BC040808|Uimc1|20184|ubiquitin interaction motif containing 1
mm9_v1_chr13_-_74908036_74908098	0.36369	ALX1.p2	BC010603|Cast|12380|calpastatin	AK036576|Cast|12380|calpastatin	AK083395|Cast|12380|calpastatin	AK089108|Cast|12380|calpastatin	AK083310|Cast|12380|calpastatin	AK029293|Cast|12380|calpastatin
mm9_v1_chr2_+_174276095_174276197	0.360723	ALX1.p2	BC147687|Tubb1|545486|tubulin, beta 1	BC147698|Tubb1|545486|tubulin, beta 1	NM_001080971|Tubb1|545486|tubulin, beta 1	BC147322|Tubb1|545486|tubulin, beta 1	BC147323|Tubb1|545486|tubulin, beta 1
mm9_v1_chr5_+_145016060_145016213	0.359384	ALX1.p2	AK049027|Bri3|55950|brain protein I3	NM_018772|Bri3|55950|brain protein I3	AK080467|Bri3|55950|brain protein I3	BC005677|Bri3|55950|brain protein I3	BC095955|Bri3|55950|brain protein I3	BC021149|Bri3|55950|brain protein I3	AF106967|Bri3|55950|brain protein I3
mm9_v1_chr8_-_9976197_9976322	0.343701	ALX1.p2	AK083353|Lig4|319583|ligase IV, DNA, ATP-dependent	AK148081|Lig4|319583|ligase IV, DNA, ATP-dependent	NM_176953|Lig4|319583|ligase IV, DNA, ATP-dependent
mm9_v1_chrX_+_9829439_9829558	0.334643	ALX1.p2	AK050930|Otc|18416|ornithine transcarbamylase	NM_008769|Otc|18416|ornithine transcarbamylase	BC024893|Otc|18416|ornithine transcarbamylase	M17030|Otc|18416|ornithine transcarbamylase
mm9_v1_chr7_+_24897332_24897378	0.328974	ALX1.p2	AF167319|Zfp112|57745|zinc finger protein 112	NM_021307|Zfp112|57745|zinc finger protein 112	BC120886|Zfp112|57745|zinc finger protein 112
mm9_v1_chr5_+_90889913_90889929	0.318379	ALX1.p2	NM_009654|Alb|11657|albumin	AK131891|Alb|11657|albumin	AK160487|Alb|11657|albumin	AK010025|Alb|11657|albumin	AK050248|Alb|11657|albumin	AJ011413|Alb|11657|albumin
mm9_v1_chr18_-_75857207_75857349	0.316168	ALX1.p2	BC058104|Ctif|269037|CBP80/20-dependent translation initiation factor	NM_201354|Ctif|269037|CBP80/20-dependent translation initiation factor
mm9_v1_chr1_+_138362933_138362977	0.314809	ALX1.p2	AK087451|Kif14|381293|kinesin family member 14
mm9_v1_chr9_-_55359898_55360033	0.29549	ALX1.p2	BC096645|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	BC003432|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK133525|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK032830|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK168321|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK167572|Etfa|110842|electron transferring flavoprotein, alpha polypeptide
mm9_v1_chr11_-_100007218_100007243	0.293803	ALX1.p2	BC034561|Krt19|16669|keratin 19	M28698|Krt19|16669|keratin 19	AB472075|Krt19|16669|keratin 19	BC085304|Krt19|16669|keratin 19	NM_008471|Krt19|16669|keratin 19
mm9_v1_chr10_-_24647243_24647289	0.290914	ALX1.p2	BC013341|Arg1|11846|arginase, liver	AK149471|Arg1|11846|arginase, liver	NM_007482|Arg1|11846|arginase, liver	BC050005|Arg1|11846|arginase, liver
mm9_v1_chr9_-_82826139_82826181	0.287436	ALX1.p2	BC068022|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr2_+_163842411_163842512	0.269798	ALX1.p2	AK199528|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr16_-_48994021_48994056	0.265724	ALX1.p2	BC052893|Dzip3|224170|DAZ interacting protein 3, zinc finger	BC117953|Dzip3|224170|DAZ interacting protein 3, zinc finger	BC117954|Dzip3|224170|DAZ interacting protein 3, zinc finger
mm9_v1_chr16_-_16146864_16146943	0.263892	ALX1.p2	BC089026|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene	AK172902|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene	AK052832|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene	AK075871|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene	AK044836|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene	NM_146068|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene	AK146053|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene
mm9_v1_chr1_-_99558490_99558623	0.258505	ALX1.p2	AK162223|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	AK135656|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	BC019375|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	BC023951|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	AK152370|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	AK168549|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	NM_133825|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed
mm9_v1_chrX_+_34335642_34335646	0.25554	ALX1.p2	U27316|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK003467|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	NM_007451|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr5_+_87429884_87429898	0.254272	ALX1.p2	AK083294|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	NM_172881|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	BC113789|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	AK149501|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35
mm9_v1_chr11_+_100442831_100442963	0.253968	ALX1.p2	AK217119|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase
mm9_v1_chr9_+_72584532_72584702	0.253526	ALX1.p2	BC007184|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr1_-_141273617_141273676	0.243891	ALX1.p2	AF406641|Crb1|170788|crumbs homolog 1 (Drosophila)	AY450552|Crb1|170788|crumbs homolog 1 (Drosophila)	NM_133239|Crb1|170788|crumbs homolog 1 (Drosophila)	AF492496|Crb1|170788|crumbs homolog 1 (Drosophila)
mm9_v1_chr16_+_33725541_33725620	0.242841	ALX1.p2	BC076596|Heg1|77446|HEG homolog 1 (zebrafish)
mm9_v1_chr4_-_6202747_6202782	0.241691	ALX1.p2	BC130261|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050020|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050220|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050260|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	NM_007824|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050210|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1
mm9_v1_chr9_-_21889810_21889832	0.241081	ALX1.p2	BC016424|Ecsit|26940|ECSIT homolog (Drosophila)	AF182510|Ecsit|26940|ECSIT homolog (Drosophila)	NM_012029|Ecsit|26940|ECSIT homolog (Drosophila)
mm9_v1_chr2_+_174171525_174171529	0.240473	ALX1.p2	AK187312|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK215851|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr8_+_107257897_107257936	0.236527	ALX1.p2	NM_001190330|Ces2a|102022|carboxylesterase 2A	NM_133960|Ces2a|102022|carboxylesterase 2A	AK078953|Ces2a|102022|carboxylesterase 2A	AK165784|Ces2a|102022|carboxylesterase 2A	BC024491|Ces2a|102022|carboxylesterase 2A	BC025537|Ces2a|102022|carboxylesterase 2A	BC024517|Ces2a|102022|carboxylesterase 2A	BC025812|Ces2a|102022|carboxylesterase 2A	BC026643|Ces2a|102022|carboxylesterase 2A	BC024082|Ces2a|102022|carboxylesterase 2A	BC031295|Ces2a|102022|carboxylesterase 2A
mm9_v1_chr6_+_47870566_47870709	0.229342	ALX1.p2	NM_001145881|Zfp212|232784|Zinc finger protein 212	NM_145576|Zfp212|232784|Zinc finger protein 212	BC088737|Zfp212|232784|Zinc finger protein 212	BC006693|Zfp212|232784|Zinc finger protein 212	AK129476|Zfp212|232784|Zinc finger protein 212
mm9_v1_chr2_-_44965603_44965763	0.229174	ALX1.p2	AK012377|Zeb2|24136|zinc finger E-box binding homeobox 2	AF033116|Zeb2|24136|zinc finger E-box binding homeobox 2	AK141157|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr11_+_101594342_101594372	0.226567	ALX1.p2	AK170616|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm9_v1_chr5_-_89886732_89886828	0.225461	ALX1.p2	M55413|Gc|14473|group specific component	AK010965|Gc|14473|group specific component	BC010762|Gc|14473|group specific component	BC051395|Gc|14473|group specific component	NM_008096|Gc|14473|group specific component
mm9_v1_chr15_-_51823257_51823330	0.223853	ALX1.p2	AK145591|Rad21|19357|RAD21 homolog (S. pombe)	AK168718|Rad21|19357|RAD21 homolog (S. pombe)	NM_009009|Rad21|19357|RAD21 homolog (S. pombe)
mm9_v1_chr19_+_12770279_12770282	0.221649	ALX1.p2	NM_029550|Keg1|64697|kidney expressed gene 1	AK002360|Keg1|64697|kidney expressed gene 1	AK165349|Keg1|64697|kidney expressed gene 1	AK165515|Keg1|64697|kidney expressed gene 1
mm9_v1_chr1_-_42749940_42749978	0.217754	ALX1.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr19_-_30623890_30624012	0.214185	ALX1.p2	AF030433|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	BC050189|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	NM_010051|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	AK141693|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	AK144119|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)
mm9_v1_chr7_+_107789414_107789679	0.210395	ALX1.p2	AK191812|Rab6|19346|RAB6, member RAS oncogene family
mm9_v1_chr17_+_56179740_56179949	0.209676	ALX1.p2	AK135763|Chaf1a|27221|chromatin assembly factor 1, subunit A (p150)	AK034839|Chaf1a|27221|chromatin assembly factor 1, subunit A (p150)	NM_013733|Chaf1a|27221|chromatin assembly factor 1, subunit A (p150)	BC053740|Chaf1a|27221|chromatin assembly factor 1, subunit A (p150)	AJ132771|Chaf1a|27221|chromatin assembly factor 1, subunit A (p150)
mm9_v1_chrM_+_8606_8716	0.195842	ALX1.p2	AK131579|COX3|17710|cytochrome c oxidase subunit III
mm9_v1_chr15_+_31154178_31154275	0.190903	ALX1.p2	BC024876|Dap|223453|death-associated protein	BC010828|Dap|223453|death-associated protein	AK169162|Dap|223453|death-associated protein	BC057669|Dap|223453|death-associated protein	AK167579|Dap|223453|death-associated protein	AK014991|Dap|223453|death-associated protein	AK167688|Dap|223453|death-associated protein
mm9_v1_chr10_+_20059547_20059574	0.188703	ALX1.p2	AK169491|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr12_+_110798661_110798666	0.187531	ALX1.p2	AK019916|Meg3|17263|maternally expressed 3
mm9_v1_chr2_+_152891690_152891738	0.182215	ALX1.p2	BC020535|BC020535|228788|cDNA sequence BC020535	NM_145536|BC020535|228788|cDNA sequence BC020535
mm9_v1_chr15_+_6658368_6658402	0.181928	ALX1.p2	AK029196|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036149|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036492|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK082586|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK087858|Rictor|78757|RPTOR independent companion of MTOR, complex 2	NM_030168|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY540053|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120903|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120904|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK019537|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK054119|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY497009|Rictor|78757|RPTOR independent companion of MTOR, complex 2
mm9_v1_chr3_+_66023884_66023904	0.178589	ALX1.p2	X83601|Ptx3|19288|pentraxin related gene
mm9_v1_chr3_-_107474108_107474148	0.177868	ALX1.p2	AK207163|Ahcyl1|229709|S-adenosylhomocysteine hydrolase-like 1
mm9_v1_chr5_+_67698177_67698238	0.174401	ALX1.p2	AK082853|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK143277|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	NM_178651|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK032323|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AY682914|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK035541|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	BC141008|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK028885|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9	AK038559|Slc30a9|109108|solute carrier family 30 (zinc transporter), member 9
mm9_v1_chr6_+_83106397_83106458	0.173814	ALX1.p2	NM_027948|1700003E16Rik|71837|RIKEN cDNA 1700003E16 gene	AK005628|1700003E16Rik|71837|RIKEN cDNA 1700003E16 gene
mm9_v1_chr12_+_77866520_77866582	0.173235	ALX1.p2	AK085076|Churc1|211151|churchill domain containing 1	BC076499|Churc1|211151|churchill domain containing 1	NM_206534|Churc1|211151|churchill domain containing 1	BC019472|Churc1|211151|churchill domain containing 1
mm9_v1_chr4_-_25208902_25208983	0.170917	ALX1.p2	AK032663|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC058809|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK129211|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK007993|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK076206|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC132195|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC138153|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK132697|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC080203|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC099529|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	NM_026194|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene
mm9_v1_chr17_-_34424623_34424771	0.169557	ALX1.p2	AF065910|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AF065911|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	M11356|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	M11357|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	M11358|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	K01924|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	K01922|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AF119253|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AF119254|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	X52643|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AY452201|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	BC019721|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	NM_010378|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK154000|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	BC031711|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	K01923|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	M21931|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	V00832|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	BC029620|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	BC043925|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK171383|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK002532|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK170931|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha	AK170844|H2-Aa|14960|histocompatibility 2, class II antigen A, alpha
mm9_v1_chr13_+_62231249_62231259	0.16395	ALX1.p2	BC061203|Zfp808|630579|zinc finger protein 80	NM_001039239|Zfp808|630579|zinc finger protein 80	AK013043|2810408B13Rik|76371|RIKEN cDNA 2810408B13 gene
mm9_v1_chr16_+_16870824_16870856	0.163795	ALX1.p2	AK041159|Top3b|21976|topoisomerase (DNA) III beta	AK144709|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr4_-_98049833_98049960	0.162972	ALX1.p2	AK216092|Tm2d1|94043|TM2 domain containing 1	AF353993|Tm2d1|94043|TM2 domain containing 1	AK009511|Tm2d1|94043|TM2 domain containing 1	BC089492|Tm2d1|94043|TM2 domain containing 1	NM_053157|Tm2d1|94043|TM2 domain containing 1
mm9_v1_chr7_-_11242322_11242322	0.162506	ALX1.p2	NM_001110020|Gm6900|628596|predicted gene 6900
mm9_v1_chr8_+_109867910_109868036	0.1624	ALX1.p2	
mm9_v1_chr4_+_135728188_135728308	0.16195	ALX1.p2	AK087452|E2f2|242705|E2F transcription factor 2	NM_177733|E2f2|242705|E2F transcription factor 2
mm9_v1_chr15_-_60656465_60656634	0.159127	ALX1.p2	AK139928|Fam84b|399603|family with sequence similarity 84, member B	NM_001162926|Fam84b|399603|family with sequence similarity 84, member B
mm9_v1_chr14_-_103379725_103379759	0.158989	ALX1.p2	AK086988|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK032276|Kctd12|239217|potassium channel tetramerisation domain containing 12
mm9_v1_chr19_+_41557126_41557136	0.158158	ALX1.p2	AK155007|Lcor|212391|ligand dependent nuclear receptor corepressor	BC099938|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr9_-_26815760_26815835	0.153047	ALX1.p2	AK210283|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)
mm9_v1_chr2_+_22924846_22924986	0.151729	ALX1.p2	AK005001|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC061484|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr11_+_75570317_75570388	0.151413	ALX1.p2	AK188896|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK201131|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr15_-_90764873_90764944	0.149973	ALX1.p2	AK052821|Kif21a|16564|kinesin family member 21A	AK047208|Kif21a|16564|kinesin family member 21A
mm9_v1_chr11_-_53520811_53520848	0.149602	ALX1.p2	BC002033|Rad50|19360|RAD50 homolog (S. cerevisiae)	AK018001|Rad50|19360|RAD50 homolog (S. cerevisiae)	AK037641|Rad50|19360|RAD50 homolog (S. cerevisiae)	NM_009012|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr19_+_12770289_12770302	0.149344	ALX1.p2	BC010803|Keg1|64697|kidney expressed gene 1	AK165462|Keg1|64697|kidney expressed gene 1	AB028071|Keg1|64697|kidney expressed gene 1
mm9_v1_chr17_-_32557916_32557924	0.1485	ALX1.p2	AF149837|Pglyrp2|57757|peptidoglycan recognition protein 2	AF149838|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315578|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315584|Pglyrp2|57757|peptidoglycan recognition protein 2	AF317548|Pglyrp2|57757|peptidoglycan recognition protein 2	AK050019|Pglyrp2|57757|peptidoglycan recognition protein 2	NM_021319|Pglyrp2|57757|peptidoglycan recognition protein 2
mm9_v1_chr11_-_107655777_107655857	0.145411	ALX1.p2	AJ272045|Cacng4|54377|calcium channel, voltage-dependent, gamma subunit 4	NM_019431|Cacng4|54377|calcium channel, voltage-dependent, gamma subunit 4	BC138503|Cacng4|54377|calcium channel, voltage-dependent, gamma subunit 4	BC138506|Cacng4|54377|calcium channel, voltage-dependent, gamma subunit 4
mm9_v1_chr1_-_173957407_173957430	0.144462	ALX1.p2	AK049613|Vangl2|93840|vang-like 2 (van gogh, Drosophila)	AK046036|Vangl2|93840|vang-like 2 (van gogh, Drosophila)
mm9_v1_chr2_+_13500271_13500328	0.142344	ALX1.p2	AK181650|Vim|22352|vimentin	AK196009|Vim|22352|vimentin	AK197870|Vim|22352|vimentin	AK203908|Vim|22352|vimentin
mm9_v1_chr11_+_23978110_23978267	0.140269	ALX1.p2	AK140949|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF051525|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169036|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169037|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK122557|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF186018|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK004395|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK043677|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	BC051418|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr11_-_58717666_58717726	0.138231	ALX1.p2	BC108271|Zfp39|22698|zinc finger protein 39	AK141135|Zfp39|22698|zinc finger protein 39	AK045944|Zfp39|22698|zinc finger protein 39	NM_011758|Zfp39|22698|zinc finger protein 39
mm9_v1_chr9_+_86636433_86636473	0.136504	ALX1.p2	NM_178738|Prss35|244954|protease, serine, 35	AK030671|Prss35|244954|protease, serine, 35	AK031411|Prss35|244954|protease, serine, 35	AK031644|Prss35|244954|protease, serine, 35	AK076281|Prss35|244954|protease, serine, 35	BC075675|Prss35|244954|protease, serine, 35	DQ223037|Prss35|244954|protease, serine, 35
mm9_v1_chr6_+_51494591_51494699	0.135122	ALX1.p2	AK152004|Snx10|71982|sorting nexin 10
mm9_v1_chr14_-_52780511_52780625	0.134177	ALX1.p2	AK082901|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)
mm9_v1_chr6_-_86683191_86683319	0.133853	ALX1.p2	AF186095|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AK132788|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AF282322|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AF163665|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)
mm9_v1_chr13_-_23802635_23802683	0.133534	ALX1.p2	BC116746|Hfe|15216|hemochromatosis	BC116744|Hfe|15216|hemochromatosis	U66849|Hfe|15216|hemochromatosis	AK009581|Hfe|15216|hemochromatosis	AK088986|Hfe|15216|hemochromatosis	NM_010424|Hfe|15216|hemochromatosis
mm9_v1_chr7_+_74792295_74792398	0.132747	ALX1.p2	AK086049|Ttc23|67009|tetratricopeptide repeat domain 23	AK165626|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168475|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168476|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168477|Ttc23|67009|tetratricopeptide repeat domain 23	NM_025905|Ttc23|67009|tetratricopeptide repeat domain 23	AK141754|Ttc23|67009|tetratricopeptide repeat domain 23	BC038179|Ttc23|67009|tetratricopeptide repeat domain 23	AK005431|Ttc23|67009|tetratricopeptide repeat domain 23	AK084269|Ttc23|67009|tetratricopeptide repeat domain 23	AK166555|Ttc23|67009|tetratricopeptide repeat domain 23	AK166613|Ttc23|67009|tetratricopeptide repeat domain 23
mm9_v1_chr14_-_71107810_71107841	0.132159	ALX1.p2	AY550930|Xpo7|65246|exportin 7	AK143729|Xpo7|65246|exportin 7
mm9_v1_chr8_-_74998992_74999131	0.13204	ALX1.p2	BC032191|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK144328|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AF536541|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK049765|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK017525|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	BC020488|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	NM_138585|Cherp|27967|calcium homeostasis endoplasmic reticulum protein
mm9_v1_chr2_-_44972914_44972969	0.126857	ALX1.p2	AJ535778|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr11_-_31571811_31571918	0.125608	ALX1.p2	NM_001024919|Bod1|69556|biorientation of chromosomes in cell division 1	BC116435|Bod1|69556|biorientation of chromosomes in cell division 1	BC116436|Bod1|69556|biorientation of chromosomes in cell division 1	BC128508|Bod1|69556|biorientation of chromosomes in cell division 1	BC128509|Bod1|69556|biorientation of chromosomes in cell division 1
mm9_v1_chr18_+_57514370_57514505	0.124768	ALX1.p2	NM_028447|Prrc1|73137|proline-rich coiled-coil 1	AK004443|Prrc1|73137|proline-rich coiled-coil 1	AK143537|Prrc1|73137|proline-rich coiled-coil 1	AK014139|Prrc1|73137|proline-rich coiled-coil 1	BC014817|Prrc1|73137|proline-rich coiled-coil 1
mm9_v1_chr17_-_78817348_78817472	0.123767	ALX1.p2	BC064130|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK033547|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK165595|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC096619|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AY382580|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	NM_199448|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK159545|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK157221|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK150241|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC052366|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)
mm9_v1_chr13_-_67830018_67830109	0.123751	ALX1.p2	BC016248|Zfp71-rs1|235907|zinc finger protein 71, related sequence	AK041786|Zfp71-rs1|235907|zinc finger protein 71, related sequence	NM_145622|Zfp71-rs1|235907|zinc finger protein 71, related sequence
mm9_v1_chr3_+_66023808_66023844	0.121468	ALX1.p2	NM_008987|Ptx3|19288|pentraxin related gene	BC022176|Ptx3|19288|pentraxin related gene
mm9_v1_chr3_+_95091630_95092080	0.120071	ALX1.p2	BC132301|Fam63a|75007|family with sequence similarity 63, member A	BC144749|Fam63a|75007|family with sequence similarity 63, member A	AK191590|Fam63a|75007|family with sequence similarity 63, member A	AK211364|Fam63a|75007|family with sequence similarity 63, member A	AB075603|Fam63a|75007|family with sequence similarity 63, member A	BC051048|Fam63a|75007|family with sequence similarity 63, member A	BC039762|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr7_+_30023324_30023364	0.119881	ALX1.p2	NM_001110201|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	NM_029887|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	BC109331|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	AK135529|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)
mm9_v1_chr15_-_79359492_79359560	0.119738	ALX1.p2	AK205483|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK212707|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr7_-_52973262_52973371	0.119624	ALX1.p2	AK146414|Sphk2|56632|sphingosine kinase 2	AK151990|Sphk2|56632|sphingosine kinase 2	BC053737|Sphk2|56632|sphingosine kinase 2	AF245448|Sphk2|56632|sphingosine kinase 2	NM_001172561|Sphk2|56632|sphingosine kinase 2	NM_203280|Sphk2|56632|sphingosine kinase 2
mm9_v1_chr1_-_175266945_175266952	0.118122	ALX1.p2	AK031927|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr9_+_65738129_65738143	0.116627	ALX1.p2	AK011090|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene	NM_026515|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene
mm9_v1_chr19_+_11592938_11593140	0.116014	ALX1.p2	AF237909|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	NM_027209|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK172345|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	BC027425|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK075671|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK007613|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B
mm9_v1_chr11_-_29147217_29147312	0.113691	ALX1.p2	BC005731|Ccdc104|216618|coiled-coil domain containing 104	AK075858|Ccdc104|216618|coiled-coil domain containing 104	NM_025740|Ccdc104|216618|coiled-coil domain containing 104	AK010468|Ccdc104|216618|coiled-coil domain containing 104	AK016479|Ccdc104|216618|coiled-coil domain containing 104
mm9_v1_chr14_+_120674933_120674934	0.111412	ALX1.p2	AK159213|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr15_+_80629020_80629144	0.109464	ALX1.p2	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr8_+_90723069_90723153	0.108557	ALX1.p2	AK077553|Papd5|214627|PAP associated domain containing 5	NM_001164497|Papd5|214627|PAP associated domain containing 5	NM_001164498|Papd5|214627|PAP associated domain containing 5	NM_001164499|Papd5|214627|PAP associated domain containing 5	BC059053|Papd5|214627|PAP associated domain containing 5	BC144796|Papd5|214627|PAP associated domain containing 5	BC144797|Papd5|214627|PAP associated domain containing 5	BC145737|Papd5|214627|PAP associated domain containing 5
mm9_v1_chr15_+_31531856_31531890	0.10673	ALX1.p2	NM_026546|Fam173b|68073|family with sequence similarity 173, member B	AK020868|Fam173b|68073|family with sequence similarity 173, member B	AK160923|Fam173b|68073|family with sequence similarity 173, member B	AK003724|Fam173b|68073|family with sequence similarity 173, member B	AK044518|Fam173b|68073|family with sequence similarity 173, member B	BC030179|Fam173b|68073|family with sequence similarity 173, member B
mm9_v1_chr5_+_90889937_90889973	0.105246	ALX1.p2	BC024643|Alb|11657|albumin	BC049971|Alb|11657|albumin	AJ457860|Alb|11657|albumin
mm9_v1_chr7_-_118214192_118214323	0.105015	ALX1.p2	AK037763|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2
mm9_v1_chr12_-_55896648_55896721	0.103263	ALX1.p2	AK011640|Snx6|72183|sorting nexin 6	AK013158|Snx6|72183|sorting nexin 6	NM_026998|Snx6|72183|sorting nexin 6	BC061028|Snx6|72183|sorting nexin 6
mm9_v1_chr4_+_116230293_116230350	0.102743	ALX1.p2	AK037224|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK133761|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK019942|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	BC066034|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	NM_029868|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1
mm9_v1_chr10_+_127707555_127707756	0.102096	ALX1.p2	AK149924|Stat2|20847|signal transducer and activator of transcription 2	AK150070|Stat2|20847|signal transducer and activator of transcription 2	AK149838|Stat2|20847|signal transducer and activator of transcription 2	AF187231|Stat2|20847|signal transducer and activator of transcription 2	AF206162|Stat2|20847|signal transducer and activator of transcription 2	NM_019963|Stat2|20847|signal transducer and activator of transcription 2	AF088862|Stat2|20847|signal transducer and activator of transcription 2
mm9_v1_chr12_-_27100112_27100136	0.101772	ALX1.p2	AF360998|Rnf144a|108089|ring finger protein 144A	NM_001081977|Rnf144a|108089|ring finger protein 144A	NM_080563|Rnf144a|108089|ring finger protein 144A
mm9_v1_chr2_+_172847371_172847458	0.100444	ALX1.p2	AK166609|Rbm38|56190|RNA binding motif protein 38	NM_019547|Rbm38|56190|RNA binding motif protein 38	BC006687|Rbm38|56190|RNA binding motif protein 38	AK162141|Rbm38|56190|RNA binding motif protein 38	AK146026|Rbm38|56190|RNA binding motif protein 38	AK172625|Rbm38|56190|RNA binding motif protein 38	BC085307|Rbm38|56190|RNA binding motif protein 38
mm9_v1_chr19_-_4793740_4793908	0.0984299	ALX1.p2	BC130256|Rbm4|19653|RNA binding motif protein 4	BC144949|Rbm4|19653|RNA binding motif protein 4	BC144950|Rbm4|19653|RNA binding motif protein 4	BC090633|Rbm4|19653|RNA binding motif protein 4	AK182573|Rbm4|19653|RNA binding motif protein 4	U89506|Rbm4|19653|RNA binding motif protein 4	AK049659|Rbm4|19653|RNA binding motif protein 4	AK158962|Rbm4|19653|RNA binding motif protein 4	NM_009032|Rbm4|19653|RNA binding motif protein 4	AK032454|Rbm4|19653|RNA binding motif protein 4
mm9_v1_chr16_-_3872273_3872373	0.0965972	ALX1.p2	AK016727|Zfp597|71063|zinc finger protein 597	NM_001033159|Zfp597|71063|zinc finger protein 597
mm9_v1_chr14_-_17407701_17408109	0.0935643	ALX1.p2	AK078471|Rarb|218772|retinoic acid receptor, beta	NM_011243|Rarb|218772|retinoic acid receptor, beta	S92180|Rarb|218772|retinoic acid receptor, beta	S56660|Rarb|218772|retinoic acid receptor, beta	AK054178|Rarb|218772|retinoic acid receptor, beta	BC076597|Rarb|218772|retinoic acid receptor, beta	X56573|Rarb|218772|retinoic acid receptor, beta
mm9_v1_chr13_+_77847947_77848021	0.0924897	ALX1.p2	NM_001163419|Fam172a|68675|family with sequence similarity 172, member A	NM_001163420|Fam172a|68675|family with sequence similarity 172, member A	NM_138312|Fam172a|68675|family with sequence similarity 172, member A	AK165273|Fam172a|68675|family with sequence similarity 172, member A	AK052419|Fam172a|68675|family with sequence similarity 172, member A	AK166285|Fam172a|68675|family with sequence similarity 172, member A	BC057380|Fam172a|68675|family with sequence similarity 172, member A	AK049727|Fam172a|68675|family with sequence similarity 172, member A	AF064782|Fam172a|68675|family with sequence similarity 172, member A	AK081188|Fam172a|68675|family with sequence similarity 172, member A
mm9_v1_chrM_+_9458_9465	0.0917622	ALX1.p2	AK139029|ND3|17718|NADH dehydrogenase subunit 3
mm9_v1_chr19_-_12841737_12842025	0.0913048	ALX1.p2	AK018620|Zfp91|109910|zinc finger protein 91	AK012081|Zfp91|109910|zinc finger protein 91
mm9_v1_chr17_-_45708739_45708860	0.0907865	ALX1.p2	AK177268|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK178129|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK179913|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK180968|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK190429|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196204|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK218770|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr12_-_112951379_112951467	0.0904471	ALX1.p2	BC055762|Bag5|70369|BCL2-associated athanogene 5	BC023099|Bag5|70369|BCL2-associated athanogene 5	NM_027404|Bag5|70369|BCL2-associated athanogene 5	BC037642|Bag5|70369|BCL2-associated athanogene 5
mm9_v1_chr2_-_140497204_140497211	0.0902727	ALX1.p2	AK028252|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	AK031464|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	AK161100|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	NM_001172160|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	NM_178382|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr9_+_65738150_65738159	0.0885573	ALX1.p2	AK012140|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene
mm9_v1_chr1_-_183111470_183111575	0.086746	ALX1.p2	AK211036|Wdr26|226757|WD repeat domain 26
mm9_v1_chr5_-_135422795_135422804	0.0865232	ALX1.p2	AK162721|Cldn4|12740|claudin 4	AK145152|Cldn4|12740|claudin 4	NM_009903|Cldn4|12740|claudin 4
mm9_v1_chrX_-_71330931_71331012	0.086288	ALX1.p2	AF158181|Mecp2|17257|methyl CpG binding protein 2	NM_010788|Mecp2|17257|methyl CpG binding protein 2	AK041453|Mecp2|17257|methyl CpG binding protein 2	BC027153|Mecp2|17257|methyl CpG binding protein 2	AK158664|Mecp2|17257|methyl CpG binding protein 2	NM_001081979|Mecp2|17257|methyl CpG binding protein 2
mm9_v1_chr11_+_23978029_23978056	0.086096	ALX1.p2	AK166352|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_001159289|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_016707|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr4_+_130168140_130168255	0.0839091	ALX1.p2	AK009389|Nkain1|67149|Na+/K+ transporting ATPase interacting 1	AK160181|Nkain1|67149|Na+/K+ transporting ATPase interacting 1
mm9_v1_chr3_-_27610155_27610257	0.083316	ALX1.p2	AK045099|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr17_+_30272123_30272409	0.0830484	ALX1.p2	BC027161|Zfand3|21769|zinc finger, AN1-type domain 3	EF437371|Zfand3|21769|zinc finger, AN1-type domain 3	BC024483|Zfand3|21769|zinc finger, AN1-type domain 3
mm9_v1_chr11_-_23795215_23795279	0.0826883	ALX1.p2	BC049163|Papolg|216578|poly(A) polymerase gamma	AK042629|Papolg|216578|poly(A) polymerase gamma	AK139065|Papolg|216578|poly(A) polymerase gamma	AK035810|Papolg|216578|poly(A) polymerase gamma	BC059271|Papolg|216578|poly(A) polymerase gamma	NM_172555|Papolg|216578|poly(A) polymerase gamma
mm9_v1_chr17_-_34999068_34999191	0.0826565	ALX1.p2	AK149531|Cfb|14962|complement factor B	BC005451|Cfb|14962|complement factor B	AK098094|Cfb|14962|complement factor B	AK149573|Cfb|14962|complement factor B	M57890|Cfb|14962|complement factor B	AK151246|Cfb|14962|complement factor B
mm9_v1_chr8_-_85966482_85966569	0.0817753	ALX1.p2	NM_019708|Scoc|56367|short coiled-coil protein
mm9_v1_chr16_+_16870955_16870979	0.0814396	ALX1.p2	AK146475|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr8_-_114400574_114400649	0.0806941	ALX1.p2	AK018496|Tmem170|66817|transmembrane protein 170	NM_025781|Tmem170|66817|transmembrane protein 170	AK007926|Tmem170|66817|transmembrane protein 170	BC139377|Tmem170|66817|transmembrane protein 170	BC145964|Tmem170|66817|transmembrane protein 170
mm9_v1_chr6_+_51494521_51494550	0.0805521	ALX1.p2	AK028163|Snx10|71982|sorting nexin 10	NM_001127348|Snx10|71982|sorting nexin 10	NM_028035|Snx10|71982|sorting nexin 10	AK166121|Snx10|71982|sorting nexin 10
mm9_v1_chr12_-_71203819_71203840	0.0805281	ALX1.p2	AY515727|Nin|18080|ninein	NM_001081453|Nin|18080|ninein
mm9_v1_chr2_-_34956162_34956206	0.0802492	ALX1.p2	BC019541|AI182371|98870|expressed sequence AI182371	BC037995|AI182371|98870|expressed sequence AI182371	AK050413|AI182371|98870|expressed sequence AI182371	BC115979|AI182371|98870|expressed sequence AI182371	BC115986|AI182371|98870|expressed sequence AI182371	NM_178885|AI182371|98870|expressed sequence AI182371	BC094504|AI182371|98870|expressed sequence AI182371	AK050126|AI182371|98870|expressed sequence AI182371
mm9_v1_chr12_+_37040755_37040991	0.0799403	ALX1.p2	NM_025312|Sostdc1|66042|sclerostin domain containing 1	AK002240|Sostdc1|66042|sclerostin domain containing 1	AK002396|Sostdc1|66042|sclerostin domain containing 1	AK007893|Sostdc1|66042|sclerostin domain containing 1	AK007967|Sostdc1|66042|sclerostin domain containing 1	AY255635|Sostdc1|66042|sclerostin domain containing 1	AY134666|Sostdc1|66042|sclerostin domain containing 1	BC021458|Sostdc1|66042|sclerostin domain containing 1	AB059271|Sostdc1|66042|sclerostin domain containing 1	AK007935|Sostdc1|66042|sclerostin domain containing 1
mm9_v1_chrX_-_71598873_71598966	0.0791043	ALX1.p2	AK134624|Lage3|66192|L antigen family, member 3	BC027305|Lage3|66192|L antigen family, member 3	AK004210|Lage3|66192|L antigen family, member 3	AK002539|Lage3|66192|L antigen family, member 3	NM_025410|Lage3|66192|L antigen family, member 3
mm9_v1_chr1_-_130313846_130314003	0.0774	ALX1.p2	AK169716|Dars|226414|aspartyl-tRNA synthetase	BC008638|Dars|226414|aspartyl-tRNA synthetase	AK152562|Dars|226414|aspartyl-tRNA synthetase	AK153299|Dars|226414|aspartyl-tRNA synthetase	AK151897|Dars|226414|aspartyl-tRNA synthetase	AK152304|Dars|226414|aspartyl-tRNA synthetase	AK153256|Dars|226414|aspartyl-tRNA synthetase	AK166009|Dars|226414|aspartyl-tRNA synthetase	AK169247|Dars|226414|aspartyl-tRNA synthetase	AK077533|Dars|226414|aspartyl-tRNA synthetase	AK146350|Dars|226414|aspartyl-tRNA synthetase	AK151027|Dars|226414|aspartyl-tRNA synthetase	AK144470|Dars|226414|aspartyl-tRNA synthetase	AK077820|Dars|226414|aspartyl-tRNA synthetase	NM_145507|Dars|226414|aspartyl-tRNA synthetase	NM_177445|Dars|226414|aspartyl-tRNA synthetase
mm9_v1_chr5_-_31522889_31523027	0.0760232	ALX1.p2	BC009004|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	NM_008014|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
mm9_v1_chrX_+_154137049_154137065	0.0751198	ALX1.p2	AJ245772|Smpx|66106|small muscle protein, X-linked	NM_025357|Smpx|66106|small muscle protein, X-linked	AK009857|Smpx|66106|small muscle protein, X-linked	AK010172|Smpx|66106|small muscle protein, X-linked	AY026524|Smpx|66106|small muscle protein, X-linked	AK003105|Smpx|66106|small muscle protein, X-linked	AF364070|Smpx|66106|small muscle protein, X-linked
mm9_v1_chr2_-_125608472_125608605	0.0750334	ALX1.p2	BC095939|Secisbp2l|70354|SECIS binding protein 2-like	AK145135|Secisbp2l|70354|SECIS binding protein 2-like	AK169713|Secisbp2l|70354|SECIS binding protein 2-like	BC141056|Secisbp2l|70354|SECIS binding protein 2-like	AK049924|Secisbp2l|70354|SECIS binding protein 2-like	NM_177608|Secisbp2l|70354|SECIS binding protein 2-like
mm9_v1_chr10_+_128787620_128787620	0.0745904	ALX1.p2	NM_001011797|Olfr782|257985|olfactory receptor 782
mm9_v1_chr7_+_30601080_30601141	0.0736914	ALX1.p2	AK030519|Zfp790|233056|zinc finger protein 790	NM_001145880|Zfp790|233056|zinc finger protein 790	NM_146185|Zfp790|233056|zinc finger protein 790	BC046774|Zfp790|233056|zinc finger protein 790	BC007476|Zfp790|233056|zinc finger protein 790
mm9_v1_chr14_+_25309895_25309936	0.0718595	ALX1.p2	NM_011297|Rps24|20088|ribosomal protein S24	NM_207634|Rps24|20088|ribosomal protein S24	NM_207635|Rps24|20088|ribosomal protein S24
mm9_v1_chr13_+_55802874_55802961	0.0710931	ALX1.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr4_+_94405963_94405990	0.0698452	ALX1.p2	BC050824|Tek|21687|endothelial-specific receptor tyrosine kinase	D13738|Tek|21687|endothelial-specific receptor tyrosine kinase	NM_013690|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr1_-_141755209_141755302	0.0697528	ALX1.p2	AJ565908|BC026782|545366|cDNA sequence BC026782	M29007|BC026782|545366|cDNA sequence BC026782	AK149511|BC026782|545366|cDNA sequence BC026782	NM_001025575|BC026782|545366|cDNA sequence BC026782
mm9_v1_chrY_-_623013_623055	0.0692384	ALX1.p2	AK154382|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	AJ007376|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	BC051046|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	NM_012008|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm9_v1_chr2_-_110203298_110203336	0.0685093	ALX1.p2	AK011548|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK012026|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr2_+_118860522_118860609	0.0683686	ALX1.p2	AK041787|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK044767|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	BC117827|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	BC117828|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	NM_173450|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK043340|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK014804|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK035752|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK035800|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2
mm9_v1_chr1_-_164867355_164867355	0.0683686	ALX1.p2	NM_001178038|Fmo6|226565|flavin containing monooxygenase 6
mm9_v1_chr17_-_85463965_85464074	0.067021	ALX1.p2	
mm9_v1_chr6_+_133055256_133055343	0.0665777	ALX1.p2	BC053418|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	NM_001163445|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK031684|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK077261|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK076076|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK050460|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK170805|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK005205|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene
mm9_v1_chr7_-_129125061_129125233	0.0648518	ALX1.p2	AK191299|Cog7|233824|component of oligomeric golgi complex 7	AK030709|Cog7|233824|component of oligomeric golgi complex 7	AK145163|Cog7|233824|component of oligomeric golgi complex 7	AK154693|Cog7|233824|component of oligomeric golgi complex 7	NM_001033318|Cog7|233824|component of oligomeric golgi complex 7	AK172200|Cog7|233824|component of oligomeric golgi complex 7	AK163143|Cog7|233824|component of oligomeric golgi complex 7
mm9_v1_chr7_-_13583494_13583549	0.0624136	ALX1.p2	BC013272|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC013335|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	AJ223959|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	AK144301|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	NM_009512|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5
mm9_v1_chrX_+_135744582_135744582	0.0622569	ALX1.p2	NM_001164630|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_175541|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr12_+_110800212_110800261	0.0622199	ALX1.p2	AK018142|Meg3|17263|maternally expressed 3
mm9_v1_chr8_-_90483392_90483493	0.0617785	ALX1.p2	AY256893|Zfp423|94187|zinc finger protein 423	AK122365|Zfp423|94187|zinc finger protein 423	NM_033327|Zfp423|94187|zinc finger protein 423
mm9_v1_chrX_+_104115963_104116162	0.0613576	ALX1.p2	NM_175271|Lpar4|78134|lysophosphatidic acid receptor 4	BC052178|Lpar4|78134|lysophosphatidic acid receptor 4	AK051709|Lpar4|78134|lysophosphatidic acid receptor 4	AK019967|Lpar4|78134|lysophosphatidic acid receptor 4	AK045289|Lpar4|78134|lysophosphatidic acid receptor 4	BC069178|Lpar4|78134|lysophosphatidic acid receptor 4	BC138893|Lpar4|78134|lysophosphatidic acid receptor 4	BC138894|Lpar4|78134|lysophosphatidic acid receptor 4
mm9_v1_chr5_+_93327023_93327086	0.0611011	ALX1.p2	NM_001077596|Shroom3|27428|shroom family member 3	AK147493|Shroom3|27428|shroom family member 3
mm9_v1_chr14_+_75642093_75642165	0.0600244	ALX1.p2	AF164524|Cpb2|56373|carboxypeptidase B2 (plasma)	NM_019775|Cpb2|56373|carboxypeptidase B2 (plasma)	AK004045|Cpb2|56373|carboxypeptidase B2 (plasma)	BC089577|Cpb2|56373|carboxypeptidase B2 (plasma)	AB021968|Cpb2|56373|carboxypeptidase B2 (plasma)	AF186188|Cpb2|56373|carboxypeptidase B2 (plasma)
mm9_v1_chr11_+_75570397_75570437	0.0592198	ALX1.p2	AK011612|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr5_+_77739506_77739565	0.0591667	ALX1.p2	AK039766|Polr2b|231329|polymerase (RNA) II (DNA directed) polypeptide B	NM_153798|Polr2b|231329|polymerase (RNA) II (DNA directed) polypeptide B	BC016415|Polr2b|231329|polymerase (RNA) II (DNA directed) polypeptide B	BC038472|Polr2b|231329|polymerase (RNA) II (DNA directed) polypeptide B
mm9_v1_chr19_+_46431369_46431437	0.0590117	ALX1.p2	NM_029186|Tmem180|75146|transmembrane protein 180	AK151797|Tmem180|75146|transmembrane protein 180	AK161305|Tmem180|75146|transmembrane protein 180	BC058746|Tmem180|75146|transmembrane protein 180	AK031554|Tmem180|75146|transmembrane protein 180	BC031169|Tmem180|75146|transmembrane protein 180
mm9_v1_chr16_-_36666078_36666195	0.0589796	ALX1.p2	AF065897|Cd86|12524|CD86 antigen	AF065898|Cd86|12524|CD86 antigen	AF065899|Cd86|12524|CD86 antigen	AF065900|Cd86|12524|CD86 antigen	S70108|Cd86|12524|CD86 antigen	BC013807|Cd86|12524|CD86 antigen	L25606|Cd86|12524|CD86 antigen	AK079513|Cd86|12524|CD86 antigen	AK155710|Cd86|12524|CD86 antigen	AK170054|Cd86|12524|CD86 antigen	NM_019388|Cd86|12524|CD86 antigen	AK172548|Cd86|12524|CD86 antigen	AK172686|Cd86|12524|CD86 antigen
mm9_v1_chr7_-_53965879_53966065	0.0587097	ALX1.p2	BC019985|Saal1|78935|serum amyloid A-like 1	BC068127|Saal1|78935|serum amyloid A-like 1	AK019878|Saal1|78935|serum amyloid A-like 1	AK132193|Saal1|78935|serum amyloid A-like 1	NM_030233|Saal1|78935|serum amyloid A-like 1	AK030833|Saal1|78935|serum amyloid A-like 1	AK134418|Saal1|78935|serum amyloid A-like 1	AK033202|Saal1|78935|serum amyloid A-like 1	AK035874|Saal1|78935|serum amyloid A-like 1	BC087944|Saal1|78935|serum amyloid A-like 1
mm9_v1_chr17_-_24832880_24833058	0.0587034	ALX1.p2	AF148688|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)	AB041561|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)
mm9_v1_chrX_-_45562050_45562056	0.0583964	ALX1.p2	BC090832|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr12_+_4924157_4924219	0.0580014	ALX1.p2	AK161170|Atad2b|320817|ATPase family, AAA domain containing 2B	NM_001099628|Atad2b|320817|ATPase family, AAA domain containing 2B	AK080580|Atad2b|320817|ATPase family, AAA domain containing 2B	AK085232|Atad2b|320817|ATPase family, AAA domain containing 2B
mm9_v1_chr1_-_80272987_80273120	0.0577126	ALX1.p2	
mm9_v1_chr7_+_52409672_52409737	0.0575586	ALX1.p2	AK004341|Pih1d1|68845|PIH1 domain containing 1	AK152695|Pih1d1|68845|PIH1 domain containing 1	AK089003|Pih1d1|68845|PIH1 domain containing 1	AK146039|Pih1d1|68845|PIH1 domain containing 1
mm9_v1_chr17_+_36131397_36131470	0.0572172	ALX1.p2	AK078380|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK020860|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK142942|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	BC055918|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene
mm9_v1_chr11_+_68859125_68859285	0.0571	ALX1.p2	NM_011496|Aurkb|20877|aurora kinase B	AK132006|Aurkb|20877|aurora kinase B	BC003261|Aurkb|20877|aurora kinase B	AK075951|Aurkb|20877|aurora kinase B	U69107|Aurkb|20877|aurora kinase B	AK191945|Aurkb|20877|aurora kinase B
mm9_v1_chr3_+_94641626_94641643	0.0566227	ALX1.p2	BC085188|Pogz|229584|pogo transposable element with ZNF domain	AK035255|Pogz|229584|pogo transposable element with ZNF domain	AK086062|Pogz|229584|pogo transposable element with ZNF domain	AK161889|Pogz|229584|pogo transposable element with ZNF domain	BC139432|Pogz|229584|pogo transposable element with ZNF domain	BC139433|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chrX_+_7367116_7367152	0.0565135	ALX1.p2	AK156165|Gripap1|54645|GRIP1 associated protein 1	AK172623|Gripap1|54645|GRIP1 associated protein 1	AK172699|Gripap1|54645|GRIP1 associated protein 1	AK172590|Gripap1|54645|GRIP1 associated protein 1	NM_207670|Gripap1|54645|GRIP1 associated protein 1	BC138523|Gripap1|54645|GRIP1 associated protein 1	BC145310|Gripap1|54645|GRIP1 associated protein 1	AK158098|Gripap1|54645|GRIP1 associated protein 1	X97571|Gripap1|54645|GRIP1 associated protein 1
mm9_v1_chr2_-_114000981_114001027	0.0560304	ALX1.p2	AK138700|Aqr|11834|aquarius	AK082873|Aqr|11834|aquarius
mm9_v1_chr16_+_16870983_16871175	0.0546471	ALX1.p2	BC031723|Top3b|21976|topoisomerase (DNA) III beta	NM_011624|Top3b|21976|topoisomerase (DNA) III beta	AK079765|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr3_+_89534639_89534732	0.0536508	ALX1.p2	NM_001146296|Adar|56417|adenosine deaminase, RNA-specific	NM_019655|Adar|56417|adenosine deaminase, RNA-specific	AK089451|Adar|56417|adenosine deaminase, RNA-specific	BC042505|Adar|56417|adenosine deaminase, RNA-specific	AF052506|Adar|56417|adenosine deaminase, RNA-specific	AF291050|Adar|56417|adenosine deaminase, RNA-specific	AF291875|Adar|56417|adenosine deaminase, RNA-specific	AF291876|Adar|56417|adenosine deaminase, RNA-specific	AF291877|Adar|56417|adenosine deaminase, RNA-specific	CT010323|Adar|56417|adenosine deaminase, RNA-specific
mm9_v1_chr2_+_152987262_152987297	0.0535534	ALX1.p2	AK162435|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK048158|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK171487|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC110309|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK088012|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK047497|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK087048|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AB093220|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr16_+_32914183_32914232	0.0529718	ALX1.p2	AK155550|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	NM_001081255|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK076529|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC151058|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC157924|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC172144|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK133482|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3
mm9_v1_chrX_+_103211038_103211115	0.0523662	ALX1.p2	BC089538|Cox7b|66142|cytochrome c oxidase subunit VIIb	NM_025379|Cox7b|66142|cytochrome c oxidase subunit VIIb	AK132086|Cox7b|66142|cytochrome c oxidase subunit VIIb	AK003414|Cox7b|66142|cytochrome c oxidase subunit VIIb	AK002593|Cox7b|66142|cytochrome c oxidase subunit VIIb	BC024350|Cox7b|66142|cytochrome c oxidase subunit VIIb
mm9_v1_chr1_+_62750471_62750778	0.052207	ALX1.p2	AK153553|Nrp2|18187|neuropilin 2	BC057028|Nrp2|18187|neuropilin 2	BC098200|Nrp2|18187|neuropilin 2	AF483506|Nrp2|18187|neuropilin 2	AF483507|Nrp2|18187|neuropilin 2
mm9_v1_chr7_-_25372613_25372684	0.0521384	ALX1.p2	AK138180|Zfp575|101544|zinc finger protein 575	BC150867|Zfp575|101544|zinc finger protein 575	BC150873|Zfp575|101544|zinc finger protein 575	AK159025|Zfp575|101544|zinc finger protein 575	NM_001033205|Zfp575|101544|zinc finger protein 575
mm9_v1_chr2_-_114001033_114001080	0.0520859	ALX1.p2	AK151716|Aqr|11834|aquarius	BC042479|Aqr|11834|aquarius	AK145547|Aqr|11834|aquarius	AK077886|Aqr|11834|aquarius	AK122310|Aqr|11834|aquarius	AK016322|Aqr|11834|aquarius	AK020468|Aqr|11834|aquarius	NM_009702|Aqr|11834|aquarius
mm9_v1_chrX_+_97710893_97711108	0.0518262	ALX1.p2	AK218313|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	AK210875|Igbp1|18518|immunoglobulin (CD79A) binding protein 1
mm9_v1_chr14_+_120674913_120674920	0.0518155	ALX1.p2	AK220470|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr2_+_11093739_11093765	0.0516615	ALX1.p2	AK085546|Prkcq|18761|protein kinase C, theta
mm9_v1_chr2_-_140497183_140497200	0.0510801	ALX1.p2	AK045146|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	AK021255|Flrt3|71436|fibronectin leucine rich transmembrane protein 3	BC052043|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr7_+_53128141_53128380	0.0498738	ALX1.p2	AK078785|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AK013118|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AJ278132|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	NM_133950|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	BC011370|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AY027435|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
mm9_v1_chr4_-_135609279_135609318	0.0494688	ALX1.p2	AK011211|Rpl11|67025|ribosomal protein L11	AK011800|Rpl11|67025|ribosomal protein L11	AK169053|Rpl11|67025|ribosomal protein L11	AK002998|Rpl11|67025|ribosomal protein L11	AK008422|Rpl11|67025|ribosomal protein L11	AK013923|Rpl11|67025|ribosomal protein L11	AK014593|Rpl11|67025|ribosomal protein L11	AK153486|Rpl11|67025|ribosomal protein L11	AK164445|Rpl11|67025|ribosomal protein L11	NM_025919|Rpl11|67025|ribosomal protein L11	AK088967|Rpl11|67025|ribosomal protein L11
mm9_v1_chr10_-_86164623_86164759	0.0492923	ALX1.p2	AK031918|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK160827|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215377|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215142|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210698|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210697|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK205935|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK216702|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK218021|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK186620|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chr8_+_97366546_97366639	0.0487633	ALX1.p2	AK200178|Coq9|67914|coenzyme Q9 homolog (yeast)
mm9_v1_chr7_+_63185457_63185630	0.0475124	ALX1.p2	AK195390|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	AK052509|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1
mm9_v1_chr2_+_136357921_136358056	0.0449093	ALX1.p2	AK029804|Ankrd5|319196|ankyrin repeat domain 5	BC089504|Ankrd5|319196|ankyrin repeat domain 5	BC120825|Ankrd5|319196|ankyrin repeat domain 5	BC144833|Ankrd5|319196|ankyrin repeat domain 5	NM_175667|Ankrd5|319196|ankyrin repeat domain 5
mm9_v1_chr7_+_50927384_50927400	0.0440576	ALX1.p2	AK155284|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)	AK160967|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)	BC005752|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)	NM_145582|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)
mm9_v1_chr2_-_23904890_23904898	0.0436754	ALX1.p2	BC033928|Hnmt|140483|histamine N-methyltransferase	AB070524|Hnmt|140483|histamine N-methyltransferase	AF297037|Hnmt|140483|histamine N-methyltransferase	NM_080462|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr6_-_38304558_38304602	0.0435891	ALX1.p2	AK167137|Zc3hav1|78781|zinc finger CCCH type, antiviral 1	AK080334|Zc3hav1|78781|zinc finger CCCH type, antiviral 1	AK004770|Zc3hav1|78781|zinc finger CCCH type, antiviral 1	AK172379|Zc3hav1|78781|zinc finger CCCH type, antiviral 1	NM_028421|Zc3hav1|78781|zinc finger CCCH type, antiviral 1	NM_028864|Zc3hav1|78781|zinc finger CCCH type, antiviral 1
mm9_v1_chr7_+_128195668_128195858	0.0424521	ALX1.p2	AK188768|Mettl9|59052|methyltransferase like 9	AK202674|Mettl9|59052|methyltransferase like 9	AK208061|Mettl9|59052|methyltransferase like 9	AK209406|Mettl9|59052|methyltransferase like 9	AK210173|Mettl9|59052|methyltransferase like 9	AK217664|Mettl9|59052|methyltransferase like 9	AK219043|Mettl9|59052|methyltransferase like 9	AK206681|Mettl9|59052|methyltransferase like 9	AK216652|Mettl9|59052|methyltransferase like 9
mm9_v1_chr6_-_128380651_128380781	0.0423774	ALX1.p2	
mm9_v1_chr8_+_112603609_112603709	0.0417754	ALX1.p2	NM_175480|Zfp612|234725|zinc finger protein 612	BC048413|Zfp612|234725|zinc finger protein 612	AK133449|Zfp612|234725|zinc finger protein 612	AK046220|Zfp612|234725|zinc finger protein 612
mm9_v1_chr3_+_102847115_102847128	0.0415865	ALX1.p2	BC029058|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr3_+_116265890_116265995	0.0413646	ALX1.p2	AK035072|Lrrc39|109245|leucine rich repeat containing 39	NM_027321|Lrrc39|109245|leucine rich repeat containing 39	NM_175413|Lrrc39|109245|leucine rich repeat containing 39	AK039277|Lrrc39|109245|leucine rich repeat containing 39	AK079125|Lrrc39|109245|leucine rich repeat containing 39	AK008119|Lrrc39|109245|leucine rich repeat containing 39	AK052159|Lrrc39|109245|leucine rich repeat containing 39	BC119529|Lrrc39|109245|leucine rich repeat containing 39	BC119530|Lrrc39|109245|leucine rich repeat containing 39	AK046671|Lrrc39|109245|leucine rich repeat containing 39
mm9_v1_chr3_+_33707638_33707720	0.0407746	ALX1.p2	AK016428|Ttc14|67120|tetratricopeptide repeat domain 14	BC103802|Ttc14|67120|tetratricopeptide repeat domain 14
mm9_v1_chr17_+_40948047_40948124	0.0401586	ALX1.p2	AK157847|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF057526|Rhag|19743|Rhesus blood group-associated A glycoprotein	AK143851|Rhag|19743|Rhesus blood group-associated A glycoprotein	NM_011269|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101941|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101942|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103512|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103662|Rhag|19743|Rhesus blood group-associated A glycoprotein	AB015192|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF065395|Rhag|19743|Rhesus blood group-associated A glycoprotein
mm9_v1_chr5_+_149114763_149114791	0.0400607	ALX1.p2	AK019985|Mtus2|77521|microtubule associated tumor suppressor candidate 2
mm9_v1_chr5_-_115934305_115934492	0.040053	ALX1.p2	AK016400|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)	NM_001167691|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)	BC022653|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)	NM_133760|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)
mm9_v1_chr10_-_62784937_62784977	0.0399273	ALX1.p2	AK139946|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)
mm9_v1_chr5_-_21371421_21371421	0.0383828	ALX1.p2	AF529192|Slc26a5|80979|solute carrier family 26, member 5	NM_030727|Slc26a5|80979|solute carrier family 26, member 5
mm9_v1_chr18_+_67624482_67624504	0.0371656	ALX1.p2	NM_144867|Slmo1|225655|slowmo homolog 1 (Drosophila)
mm9_v1_chr13_+_16106279_16106315	0.0369546	ALX1.p2	NM_008380|Inhba|16323|inhibin beta-A	X69619|Inhba|16323|inhibin beta-A	BC053527|Inhba|16323|inhibin beta-A
mm9_v1_chr5_-_63157309_63157425	0.0367127	ALX1.p2	AK037027|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	AK039153|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	AK041540|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	NM_178407|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm9_v1_chr7_-_107731579_107731643	0.0367092	ALX1.p2	AK077636|Mrpl48|52443|mitochondrial ribosomal protein L48	BC037190|Mrpl48|52443|mitochondrial ribosomal protein L48	AK019161|Mrpl48|52443|mitochondrial ribosomal protein L48	AK171917|Mrpl48|52443|mitochondrial ribosomal protein L48	NM_198831|Mrpl48|52443|mitochondrial ribosomal protein L48
mm9_v1_chr1_+_21208679_21208742	0.0365534	ALX1.p2	BC034768|Tmem14a|75712|transmembrane protein 14A	BC060034|Tmem14a|75712|transmembrane protein 14A	NM_029398|Tmem14a|75712|transmembrane protein 14A	AK017734|Tmem14a|75712|transmembrane protein 14A
mm9_v1_chr5_-_17341534_17341556	0.0363341	ALX1.p2	L23108|Cd36|12491|CD36 antigen	AK151355|Cd36|12491|CD36 antigen
mm9_v1_chr2_+_13500063_13500099	0.0350371	ALX1.p2	AK198215|Vim|22352|vimentin	AK208074|Vim|22352|vimentin	AK209588|Vim|22352|vimentin	AK209779|Vim|22352|vimentin	AK210390|Vim|22352|vimentin	AK210884|Vim|22352|vimentin	AK212337|Vim|22352|vimentin	AK212338|Vim|22352|vimentin	AK212907|Vim|22352|vimentin	AK213561|Vim|22352|vimentin	AK216501|Vim|22352|vimentin	AK217097|Vim|22352|vimentin	AK218080|Vim|22352|vimentin	AK218318|Vim|22352|vimentin	AK205873|Vim|22352|vimentin
mm9_v1_chr16_+_42955690_42955696	0.0349802	ALX1.p2	BC002163|BC002163|170658|NADH dehydrogenase Fe-S protein 5 pseudogene
mm9_v1_chr6_-_41264706_41264793	0.0348911	ALX1.p2	AK007843|Try5|103964|trypsin 5	AK131898|Try5|103964|trypsin 5	AK160484|Try5|103964|trypsin 5	AB009661|Try5|103964|trypsin 5	NM_001003405|Try5|103964|trypsin 5	BC139220|Try5|103964|trypsin 5	BC139223|Try5|103964|trypsin 5
mm9_v1_chr9_-_21767872_21768019	0.0343237	ALX1.p2	BC003953|Epor|13857|erythropoietin receptor	J04843|Epor|13857|erythropoietin receptor	AK139031|Epor|13857|erythropoietin receptor	BC046282|Epor|13857|erythropoietin receptor	NM_010149|Epor|13857|erythropoietin receptor
mm9_v1_chr2_-_6051177_6051230	0.0341948	ALX1.p2	AK132370|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	BC025867|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	BC029968|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	AK077380|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	NM_001159657|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	NM_144883|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene
mm9_v1_chr11_-_53520800_53520809	0.0338671	ALX1.p2	AK144155|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr3_-_38349112_38349206	0.0336978	ALX1.p2	BC051515|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr6_+_21899614_21899692	0.0336427	ALX1.p2	NM_023626|Ing3|71777|inhibitor of growth family, member 3	AY007791|Ing3|71777|inhibitor of growth family, member 3	AK080787|Ing3|71777|inhibitor of growth family, member 3	AK131993|Ing3|71777|inhibitor of growth family, member 3	BC018342|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr9_+_92352215_92352231	0.0333019	ALX1.p2	AK035919|Plscr4|235527|phospholipid scramblase 4	AK045372|Plscr4|235527|phospholipid scramblase 4	AK165919|Plscr4|235527|phospholipid scramblase 4	NM_178711|Plscr4|235527|phospholipid scramblase 4	AK035878|Plscr4|235527|phospholipid scramblase 4
mm9_v1_chr6_-_99216494_99216530	0.032336	ALX1.p2	BC064764|Foxp1|108655|forkhead box P1	AK171994|Foxp1|108655|forkhead box P1	BC065386|Foxp1|108655|forkhead box P1	NM_001197321|Foxp1|108655|forkhead box P1	AK040800|Foxp1|108655|forkhead box P1
mm9_v1_chr5_+_90890764_90890776	0.0319675	ALX1.p2	AK050644|Alb|11657|albumin
mm9_v1_chr3_-_88576415_88576522	0.0303631	ALX1.p2	AK158745|Syt11|229521|synaptotagmin XI	AK144169|Syt11|229521|synaptotagmin XI	AK164082|Syt11|229521|synaptotagmin XI	BC054526|Syt11|229521|synaptotagmin XI	AK164368|Syt11|229521|synaptotagmin XI	NM_018804|Syt11|229521|synaptotagmin XI
mm9_v1_chr5_-_52552870_52552894	0.0300588	ALX1.p2	AK171814|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr10_-_67599367_67599429	0.0300237	ALX1.p2	AF401550|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)
mm9_v1_chr12_-_21396339_21396369	0.0299994	ALX1.p2	
mm9_v1_chr11_-_101278690_101278747	0.0295617	ALX1.p2	AK168281|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	AK136332|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	AK078016|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	BC005711|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	NM_144829|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1
mm9_v1_chr12_-_80007923_80007953	0.0291404	ALX1.p2	BC028902|Plek2|27260|pleckstrin 2	NM_013738|Plek2|27260|pleckstrin 2	AF170564|Plek2|27260|pleckstrin 2
mm9_v1_chr7_-_13583329_13583480	0.0288069	ALX1.p2	AF072760|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC115421|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145823|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145825|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5
mm9_v1_chr18_-_32719516_32719687	0.0287062	ALX1.p2	AK002769|Gypc|71683|glycophorin C	AK082930|Gypc|71683|glycophorin C	AK152607|Gypc|71683|glycophorin C	AK159730|Gypc|71683|glycophorin C	BC027408|Gypc|71683|glycophorin C	AK089652|Gypc|71683|glycophorin C	AY234183|Gypc|71683|glycophorin C	NM_001048207|Gypc|71683|glycophorin C
mm9_v1_chr7_+_19705202_19705237	0.0286266	ALX1.p2	NM_175530|Fbxo46|243867|F-box protein 46	AK030147|Fbxo46|243867|F-box protein 46	BC049813|Fbxo46|243867|F-box protein 46
mm9_v1_chr3_+_121948541_121948621	0.028113	ALX1.p2	BC132404|Gclm|14630|glutamate-cysteine ligase, modifier subunit	BC138783|Gclm|14630|glutamate-cysteine ligase, modifier subunit
mm9_v1_chr9_-_7872896_7873169	0.0280709	ALX1.p2	AK172636|Birc3|11796|baculoviral IAP repeat-containing 3	BC011338|Birc3|11796|baculoviral IAP repeat-containing 3	U88908|Birc3|11796|baculoviral IAP repeat-containing 3	AK162108|Birc3|11796|baculoviral IAP repeat-containing 3	NM_007464|Birc3|11796|baculoviral IAP repeat-containing 3
mm9_v1_chr9_+_51894884_51895031	0.027936	ALX1.p2	AK216134|Rdx|19684|radixin
mm9_v1_chr6_-_118361541_118361556	0.0278028	ALX1.p2	BC030906|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)
mm9_v1_chr4_+_141000576_141000628	0.0275335	ALX1.p2	NM_009541|Zbtb17|22642|zinc finger and BTB domain containing 17	U14556|Zbtb17|22642|zinc finger and BTB domain containing 17	AK051971|Zbtb17|22642|zinc finger and BTB domain containing 17	U22396|Zbtb17|22642|zinc finger and BTB domain containing 17	BC060055|Zbtb17|22642|zinc finger and BTB domain containing 17	AK134251|Zbtb17|22642|zinc finger and BTB domain containing 17
mm9_v1_chr17_-_56724005_56724033	0.0275051	ALX1.p2	NM_001029979|Safb2|224902|scaffold attachment factor B2
mm9_v1_chrX_-_6765768_6765839	0.0250004	ALX1.p2	AK142227|Clcn5|12728|chloride channel 5	AK145763|Clcn5|12728|chloride channel 5	BC036347|Clcn5|12728|chloride channel 5	AK052990|Clcn5|12728|chloride channel 5	AF134117|Clcn5|12728|chloride channel 5	NM_016691|Clcn5|12728|chloride channel 5
mm9_v1_chr11_-_54533036_54533041	0.0249753	ALX1.p2	
mm9_v1_chr13_-_62568147_62568171	0.0246348	ALX1.p2	AY189975|Zfp935|71508|zinc finger protein 935	BC012524|Zfp935|71508|zinc finger protein 935	BC047396|Zfp935|71508|zinc finger protein 935	AK018441|Zfp935|71508|zinc finger protein 935	BC037448|Zfp935|71508|zinc finger protein 935	BC113193|Zfp935|71508|zinc finger protein 935	BC087936|Zfp935|71508|zinc finger protein 935	NM_001136496|Zfp935|71508|zinc finger protein 935	NM_178875|Zfp935|71508|zinc finger protein 935
mm9_v1_chr6_-_137118238_137118241	0.0243898	ALX1.p2	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr10_-_116500780_116500882	0.0243731	ALX1.p2	AK181482|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	AK012295|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	Z31553|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	AK088145|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	BC007470|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	BC026918|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	AB041570|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	AK075581|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	AK166891|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	AK145406|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)	NM_007636|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)
mm9_v1_chr11_+_70338927_70338937	0.0241796	ALX1.p2	U13393|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr10_-_124765435_124765590	0.0238552	ALX1.p2	BC117803|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC117804|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC126960|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC089606|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	AF058054|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	NM_011391|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm9_v1_chr2_+_87366184_87366358	0.0232658	ALX1.p2	BC090254|Srp9|27058|signal recognition particle 9
mm9_v1_chr2_+_28915770_28915796	0.022302	ALX1.p2	AK053589|Ttf1|22130|transcription termination factor, RNA polymerase I	AK163606|Ttf1|22130|transcription termination factor, RNA polymerase I	NM_009442|Ttf1|22130|transcription termination factor, RNA polymerase I	AK140081|Ttf1|22130|transcription termination factor, RNA polymerase I	X83974|Ttf1|22130|transcription termination factor, RNA polymerase I
mm9_v1_chr7_-_110655456_110655457	0.020713	ALX1.p2	BC113199|Olfr610|259085|olfactory receptor 610	NM_147081|Olfr610|259085|olfactory receptor 610
mm9_v1_chr17_-_24210437_24210453	0.019669	ALX1.p2	AK052960|Kctd5|69259|potassium channel tetramerisation domain containing 5	NM_027008|Kctd5|69259|potassium channel tetramerisation domain containing 5
mm9_v1_chr2_+_87642546_87642547	0.0190706	ALX1.p2	BC140120|Olfr1143|258290|olfactory receptor 1143	BC140161|Olfr1143|258290|olfactory receptor 1143	BC140202|Olfr1143|258290|olfactory receptor 1143	NM_146293|Olfr1143|258290|olfactory receptor 1143
mm9_v1_chr16_-_17201556_17201596	0.0189004	ALX1.p2	AK165620|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	BC106149|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	BC093503|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AK167847|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	BC049075|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AJ130961|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	NM_009456|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	X97042|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AK152522|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AK007265|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3
mm9_v1_chr15_+_65703468_65703625	0.0186101	ALX1.p2	AK039483|Efr3a|76740|EFR3 homolog A (S. cerevisiae)
mm9_v1_chr3_-_103546233_103546253	0.0183349	ALX1.p2	AK031871|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr2_+_165420527_165420536	0.0176633	ALX1.p2	AK141765|Eya2|14049|eyes absent 2 homolog (Drosophila)	AK137718|Eya2|14049|eyes absent 2 homolog (Drosophila)
mm9_v1_chr13_-_23515682_23515773	0.0173497	ALX1.p2	AB021860|Abt1|30946|activator of basal transcription 1	AK019220|Abt1|30946|activator of basal transcription 1	AK019221|Abt1|30946|activator of basal transcription 1	BC082609|Abt1|30946|activator of basal transcription 1	AK009557|Abt1|30946|activator of basal transcription 1	AK029222|Abt1|30946|activator of basal transcription 1	NM_013924|Abt1|30946|activator of basal transcription 1
mm9_v1_chr15_+_38591604_38591751	0.0170979	ALX1.p2	NM_025494|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK075779|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK129007|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK151237|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK006323|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK168914|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	BC010217|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AB088407|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	U13839|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1
mm9_v1_chr17_-_48572043_48572062	0.015605	ALX1.p2	AF161699|Apobec2|11811|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2	NM_009694|Apobec2|11811|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2
mm9_v1_chr1_-_146622545_146622564	0.0156027	ALX1.p2	BC099387|Rgs18|64214|regulator of G-protein signaling 18	AK036407|Rgs18|64214|regulator of G-protein signaling 18	BC132544|Rgs18|64214|regulator of G-protein signaling 18	BC132546|Rgs18|64214|regulator of G-protein signaling 18	NM_022881|Rgs18|64214|regulator of G-protein signaling 18	AB042807|Rgs18|64214|regulator of G-protein signaling 18	AF302685|Rgs18|64214|regulator of G-protein signaling 18
mm9_v1_chr18_+_37925619_37925770	0.0155484	ALX1.p2	BC054528|Pcdhga12|93724|protocadherin gamma subfamily A, 12	U88550|Pcdhga12|93724|protocadherin gamma subfamily A, 12	AY013795|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr14_+_28290299_28290355	0.0150332	ALX1.p2	AK173099|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed
mm9_v1_chr10_-_33344405_33344571	0.0147082	ALX1.p2	AK039308|Clvs2|215890|clavesin 2	NM_175448|Clvs2|215890|clavesin 2	BC058539|Clvs2|215890|clavesin 2	AK163214|Clvs2|215890|clavesin 2	AK053797|Clvs2|215890|clavesin 2	AK139868|Clvs2|215890|clavesin 2	AK139409|Clvs2|215890|clavesin 2	AK169009|Clvs2|215890|clavesin 2
mm9_v1_chr9_+_96159666_96159703	0.0146299	ALX1.p2	NM_001184710|Tfdp2|211586|transcription factor Dp 2	NM_001184711|Tfdp2|211586|transcription factor Dp 2	AK158829|Tfdp2|211586|transcription factor Dp 2	BC092230|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr1_-_141456740_141456821	0.0142515	ALX1.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr8_-_23016871_23016903	0.0139751	ALX1.p2	BC099849|Defb11|246081|defensin beta 11	AJ437646|Defb11|246081|defensin beta 11	NM_139221|Defb11|246081|defensin beta 11
mm9_v1_chr17_+_44090222_44090252	0.0136683	ALX1.p2	AK160865|Rcan2|53901|regulator of calcineurin 2
mm9_v1_chr18_+_59222034_59222186	0.0134856	ALX1.p2	NM_001167925|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	NM_173759|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK080452|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK048493|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	BC075669|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene
mm9_v1_chr4_-_107973656_107973675	0.0134231	ALX1.p2	AK162646|Zyg11b|414872|zyg-ll homolog B (C. elegans)	BC117977|Zyg11b|414872|zyg-ll homolog B (C. elegans)	BC117978|Zyg11b|414872|zyg-ll homolog B (C. elegans)	BC139383|Zyg11b|414872|zyg-ll homolog B (C. elegans)	BC139384|Zyg11b|414872|zyg-ll homolog B (C. elegans)	AK145130|Zyg11b|414872|zyg-ll homolog B (C. elegans)	AK166031|Zyg11b|414872|zyg-ll homolog B (C. elegans)	AK166174|Zyg11b|414872|zyg-ll homolog B (C. elegans)
mm9_v1_chr11_-_118025722_118025748	0.0130333	ALX1.p2	AK210975|Cyth1|19157|cytohesin 1
mm9_v1_chr6_-_13789847_13789902	0.0126311	ALX1.p2	BC065154|Gpr85|64450|G protein-coupled receptor 85	NM_145066|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr5_-_44152043_44152071	0.0124627	ALX1.p2	AK210775|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chr14_+_79915429_79915530	0.0124404	ALX1.p2	AK132456|Elf1|13709|E74-like factor 1	U19617|Elf1|13709|E74-like factor 1	AK156098|Elf1|13709|E74-like factor 1	BC037743|Elf1|13709|E74-like factor 1	BC027532|Elf1|13709|E74-like factor 1	BC053914|Elf1|13709|E74-like factor 1
mm9_v1_chr9_-_105372402_105372478	0.0123308	ALX1.p2	AK209035|Atp2c1|235574|ATPase, Ca++-sequestering	AK173154|Atp2c1|235574|ATPase, Ca++-sequestering	AJ551270|Atp2c1|235574|ATPase, Ca++-sequestering
mm9_v1_chr10_+_5057034_5057137	0.012173	ALX1.p2	
mm9_v1_chr14_-_14953416_14953474	0.0118229	ALX1.p2	BC006869|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	NM_025550|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK002343|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK010287|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AJ252147|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
mm9_v1_chr19_-_13890077_13890147	0.0116137	ALX1.p2	NM_146796|Olfr1499|258792|olfactory receptor 1499	BC132138|Olfr1499|258792|olfactory receptor 1499
mm9_v1_chr2_-_154429368_154429412	0.0111346	ALX1.p2	BC025796|Pxmp4|59038|peroxisomal membrane protein 4	AJ271476|Pxmp4|59038|peroxisomal membrane protein 4	AK143785|Pxmp4|59038|peroxisomal membrane protein 4	AK156743|Pxmp4|59038|peroxisomal membrane protein 4	AK050647|Pxmp4|59038|peroxisomal membrane protein 4	NM_021534|Pxmp4|59038|peroxisomal membrane protein 4
mm9_v1_chr15_+_92427539_92427556	0.0109642	ALX1.p2	NM_001164594|Pdzrn4|239618|PDZ domain containing RING finger 4	AK135524|Pdzrn4|239618|PDZ domain containing RING finger 4
mm9_v1_chr4_+_99654571_99654630	0.0105811	ALX1.p2	BC005617|Pgm2|72157|phosphoglucomutase 2
mm9_v1_chr3_-_146394874_146394956	0.0104735	ALX1.p2	AK204254|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr1_+_175350728_175350734	0.0104706	ALX1.p2	BC033443|Aim2|383619|absent in melanoma 2	AK050724|Aim2|383619|absent in melanoma 2	NM_001013779|Aim2|383619|absent in melanoma 2
mm9_v1_chr1_-_132558108_132558210	0.0101856	ALX1.p2	AK136735|C4bp|12269|complement component 4 binding protein	AK162345|C4bp|12269|complement component 4 binding protein	AB094486|C4bp|12269|complement component 4 binding protein	AK149477|C4bp|12269|complement component 4 binding protein	BC012257|C4bp|12269|complement component 4 binding protein	AB094485|C4bp|12269|complement component 4 binding protein	NM_007576|C4bp|12269|complement component 4 binding protein	AK050344|C4bp|12269|complement component 4 binding protein	AK149468|C4bp|12269|complement component 4 binding protein	M17122|C4bp|12269|complement component 4 binding protein
mm9_v1_chr11_-_53520771_53520798	0.00991377	ALX1.p2	BC058180|Rad50|19360|RAD50 homolog (S. cerevisiae)	U66887|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr4_-_19849637_19849704	0.00980803	ALX1.p2	AK089507|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	BC087899|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170578|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170659|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AB088358|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170405|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170072|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK137586|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AY517482|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr2_+_32583221_32583245	0.00974113	ALX1.p2	AK042709|Sh2d3c|27387|SH2 domain containing 3C	AK085885|Sh2d3c|27387|SH2 domain containing 3C	AK135231|Sh2d3c|27387|SH2 domain containing 3C	AB030442|Sh2d3c|27387|SH2 domain containing 3C
mm9_v1_chr5_+_31357245_31357300	0.00968294	ALX1.p2	BC137856|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	BC144972|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	BC144973|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
mm9_v1_chr4_+_125181288_125181474	0.00943437	ALX1.p2	NM_008049|Ftl2|14337|ferritin light chain 2	AK145265|Ftl1|14325|ferritin light chain 1	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene	BC106145|Ftl1|14325|ferritin light chain 1	BC150761|Ftl2|14337|ferritin light chain 2	S89400|Ftl2|14337|ferritin light chain 2
mm9_v1_chr8_-_119413677_119413720	0.00891561	ALX1.p2	AK210645|2310061C15Rik|66531|RIKEN cDNA 2310061C15 gene
mm9_v1_chr9_-_36954858_36954932	0.00886428	ALX1.p2	NM_148950|Pknox2|208076|Pbx/knotted 1 homeobox 2
mm9_v1_chr9_+_123429291_123429490	0.00793249	ALX1.p2	AK180316|Limd1|29806|LIM domains containing 1	AK212225|Limd1|29806|LIM domains containing 1	AK215267|Limd1|29806|LIM domains containing 1	AK215631|Limd1|29806|LIM domains containing 1	AK216846|Limd1|29806|LIM domains containing 1	AK220081|Limd1|29806|LIM domains containing 1	AK210611|Limd1|29806|LIM domains containing 1
mm9_v1_chr4_+_135354137_135354188	0.00772433	ALX1.p2	AK033394|Myom3|242702|myomesin family, member 3
mm9_v1_chr5_+_34967936_34968062	0.00765584	ALX1.p2	AK207405|Add1|11518|adducin 1 (alpha)	AK215011|Add1|11518|adducin 1 (alpha)
mm9_v1_chr19_-_5661634_5661648	0.00716312	ALX1.p2	D11374|Sipa1|20469|signal-induced proliferation associated gene 1
mm9_v1_chr5_-_123237776_123238028	0.00697206	ALX1.p2	
mm9_v1_chr2_-_34708015_34708026	0.00692064	ALX1.p2	AK189840|Psmd5|66998|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
mm9_v1_chr11_+_114751354_114751532	0.00644616	ALX1.p2	AK045869|Cd300a|217303|CD300A antigen	NM_170758|Cd300a|217303|CD300A antigen	BC139296|Cd300a|217303|CD300A antigen	BC139297|Cd300a|217303|CD300A antigen	AB095675|Cd300a|217303|CD300A antigen
mm9_v1_chr15_-_31383379_31383491	0.00560224	ALX1.p2	BC048680|Ropn1l|252967|ropporin 1-like	AF305427|Ropn1l|252967|ropporin 1-like	BC060990|Ropn1l|252967|ropporin 1-like	NM_145852|Ropn1l|252967|ropporin 1-like	AK131675|Ropn1l|252967|ropporin 1-like
mm9_v1_chr19_-_34736879_34736908	0.00536061	ALX1.p2	AK090072|Gm14446|667373|predicted gene 14446
mm9_v1_chr7_+_110486525_110486569	0.00532637	ALX1.p2	BC141003|Olfr599|258726|olfactory receptor 599	NM_146731|Olfr599|258726|olfactory receptor 599
mm9_v1_chr18_+_77182835_77182910	0.00509047	ALX1.p2	NM_001039202|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	NM_029826|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	AK137285|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	AK002837|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	AK151285|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	AK152162|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	AK152259|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	AK014208|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	BC058177|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2
mm9_v1_chr9_+_18925400_18925400	0.00477238	ALX1.p2	BC106988|Olfr836|258557|olfactory receptor 836	BC106989|Olfr836|258557|olfactory receptor 836	NM_146564|Olfr836|258557|olfactory receptor 836
mm9_v1_chr15_-_99650502_99650572	0.00464226	ALX1.p2	AF307844|Lima1|65970|LIM domain and actin binding 1	AK028186|Lima1|65970|LIM domain and actin binding 1	AK031698|Lima1|65970|LIM domain and actin binding 1	AK132314|Lima1|65970|LIM domain and actin binding 1	AK085065|Lima1|65970|LIM domain and actin binding 1	NM_023063|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr19_-_39815590_39815597	0.00435801	ALX1.p2	NM_001039555|Cyp2c68|433247|cytochrome P450, family 2, subfamily c, polypeptide 68
mm9_v1_chr14_+_120674976_120674983	0.0042922	ALX1.p2	AK178232|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr9_+_119803988_119804030	0.00398439	ALX1.p2	BC050106|Wdr48|67561|WD repeat domain 48	AK031244|Wdr48|67561|WD repeat domain 48	BC062967|Wdr48|67561|WD repeat domain 48	AK018396|Wdr48|67561|WD repeat domain 48	AK030041|Wdr48|67561|WD repeat domain 48	AK035273|Wdr48|67561|WD repeat domain 48	AK035864|Wdr48|67561|WD repeat domain 48	AK043970|Wdr48|67561|WD repeat domain 48	AK128953|Wdr48|67561|WD repeat domain 48	NM_026236|Wdr48|67561|WD repeat domain 48	AK033631|Wdr48|67561|WD repeat domain 48	AK012599|Wdr48|67561|WD repeat domain 48	BC048155|Wdr48|67561|WD repeat domain 48
mm9_v1_chr6_-_142271469_142271500	0.00384791	ALX1.p2	AF240694|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	NM_130861|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	AK029706|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5
mm9_v1_chr16_+_44811858_44811936	0.00382491	ALX1.p2	AK089262|Cd200r4|239849|CD200 receptor 4
mm9_v1_chr3_+_40439675_40439741	0.00378453	ALX1.p2	NM_175515|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	AK035092|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC125523|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC132387|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)
mm9_v1_chr3_-_52821116_52821157	0.00356286	ALX1.p2	AB093286|Cog6|67542|component of oligomeric golgi complex 6	AK048986|Cog6|67542|component of oligomeric golgi complex 6	AK153320|Cog6|67542|component of oligomeric golgi complex 6	AK031149|Cog6|67542|component of oligomeric golgi complex 6	AK045223|Cog6|67542|component of oligomeric golgi complex 6	NM_026225|Cog6|67542|component of oligomeric golgi complex 6	AK016663|Cog6|67542|component of oligomeric golgi complex 6
mm9_v1_chr5_+_33760994_33761117	0.0035245	ALX1.p2	AK084585|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene	AK163728|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene
mm9_v1_chr7_-_15031917_15031936	0.00274944	ALX1.p2	EU486167|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene	AK041070|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene	NM_175250|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene	EU486166|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene
mm9_v1_chr2_-_169956719_169956719	0.00255691	ALX1.p2	AK156475|Zfp217|228913|zinc finger protein 217	NM_001033299|Zfp217|228913|zinc finger protein 217
mm9_v1_chr2_-_9981155_9981246	0.00206565	ALX1.p2	AK187037|Atp5c1|11949|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
mm9_v1_chr1_+_177562307_177562314	0.00202167	ALX1.p2	AK129011|Kmo|98256|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
mm9_v1_chr5_+_88254710_88254721	0.00201838	ALX1.p2	BC049645|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene	BC103787|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene	AK015291|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene	NM_001163551|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene	NM_028648|4930432K09Rik|73779|RIKEN cDNA 4930432K09 gene
mm9_v1_chr15_-_79359998_79360114	0.000775922	ALX1.p2	AK079294|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK011338|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK079442|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK164451|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr17_-_36221134_36221342	0.0006024	ALX1.p2	AY533667|H2-Bl|14963|histocompatibility 2, blastocyst	AY533670|H2-Bl|14963|histocompatibility 2, blastocyst	AY533668|H2-Bl|14963|histocompatibility 2, blastocyst	AY533666|H2-Bl|14963|histocompatibility 2, blastocyst	AY989821|H2-Bl|14963|histocompatibility 2, blastocyst	AY989822|H2-Bl|14963|histocompatibility 2, blastocyst	AY989823|H2-Bl|14963|histocompatibility 2, blastocyst	AY989824|H2-Bl|14963|histocompatibility 2, blastocyst	AY989825|H2-Bl|14963|histocompatibility 2, blastocyst	AY989826|H2-Bl|14963|histocompatibility 2, blastocyst	AY989827|H2-Bl|14963|histocompatibility 2, blastocyst	AY989829|H2-Bl|14963|histocompatibility 2, blastocyst	AY989832|H2-Bl|14963|histocompatibility 2, blastocyst	AY989833|H2-Bl|14963|histocompatibility 2, blastocyst	AY989838|H2-Bl|14963|histocompatibility 2, blastocyst	AY989839|H2-Bl|14963|histocompatibility 2, blastocyst	AY989840|H2-Bl|14963|histocompatibility 2, blastocyst	AY989841|H2-Bl|14963|histocompatibility 2, blastocyst	AY989842|H2-Bl|14963|histocompatibility 2, blastocyst	AY989843|H2-Bl|14963|histocompatibility 2, blastocyst	AY989844|H2-Bl|14963|histocompatibility 2, blastocyst	AY989845|H2-Bl|14963|histocompatibility 2, blastocyst	AY989846|H2-Bl|14963|histocompatibility 2, blastocyst	AY989847|H2-Bl|14963|histocompatibility 2, blastocyst	AY989848|H2-Bl|14963|histocompatibility 2, blastocyst	AY989850|H2-Bl|14963|histocompatibility 2, blastocyst	AY989851|H2-Bl|14963|histocompatibility 2, blastocyst	AY989852|H2-Bl|14963|histocompatibility 2, blastocyst	AY989853|H2-Bl|14963|histocompatibility 2, blastocyst	AY989854|H2-Bl|14963|histocompatibility 2, blastocyst	AY989856|H2-Bl|14963|histocompatibility 2, blastocyst	AY989857|H2-Bl|14963|histocompatibility 2, blastocyst	NM_008199|H2-Bl|14963|histocompatibility 2, blastocyst	BC058170|H2-Bl|14963|histocompatibility 2, blastocyst
mm9_v1_chr8_-_87364463_87364577	0.000412307	ALX1.p2	X92410|Rad23a|19358|RAD23a homolog (S. cerevisiae)	BC138684|Rad23a|19358|RAD23a homolog (S. cerevisiae)	BC145372|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK009733|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK038300|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK161875|Rad23a|19358|RAD23a homolog (S. cerevisiae)	NM_009010|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK045224|Rad23a|19358|RAD23a homolog (S. cerevisiae)	AK165467|Rad23a|19358|RAD23a homolog (S. cerevisiae)
mm9_v1_chr19_-_41151561_41151602	0.000371916	ALX1.p2	BC060980|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	AK140031|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	NM_153520|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein
mm9_v1_chr13_+_55827167_55827225	0.000153846	ALX1.p2	AK209800|Txndc15|69672|thioredoxin domain containing 15	AK213704|Txndc15|69672|thioredoxin domain containing 15	AK206830|Txndc15|69672|thioredoxin domain containing 15
mm9_v1_chr16_+_38562924_38562994	0.000127418	ALX1.p2	AK169127|Tmem39a|67846|transmembrane protein 39a	AK011646|Tmem39a|67846|transmembrane protein 39a	AK133638|Tmem39a|67846|transmembrane protein 39a	AK017817|Tmem39a|67846|transmembrane protein 39a	BC020318|Tmem39a|67846|transmembrane protein 39a	NM_026407|Tmem39a|67846|transmembrane protein 39a
mm9_v1_chr16_+_44370127_44370136	4.48185e-05	ALX1.p2	BC024956|Spice1|212514|spindle and centriole associated protein 1
