mm9_v1_chr12_+_110783593_110783620	2.02739	EOMES.p2	AK018105|Meg3|17263|maternally expressed 3	AK140201|Meg3|17263|maternally expressed 3
mm9_v1_chr4_-_118966829_118966902	1.72146	EOMES.p2	AK188049|Ybx1|22608|Y box protein 1	AF038994|Ybx1|22608|Y box protein 1
mm9_v1_chr2_+_70312979_70313222	1.69559	EOMES.p2	AK036234|Sp5|64406|trans-acting transcription factor 5	NM_022435|Sp5|64406|trans-acting transcription factor 5	BC116691|Sp5|64406|trans-acting transcription factor 5	BC117505|Sp5|64406|trans-acting transcription factor 5	AF279479|Sp5|64406|trans-acting transcription factor 5
mm9_v1_chr4_-_49858561_49858640	1.44962	EOMES.p2	AK162603|Grin3a|242443|glutamate receptor ionotropic, NMDA3A	AK044171|Grin3a|242443|glutamate receptor ionotropic, NMDA3A	AK138366|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chr10_-_24919916_24919967	1.19732	EOMES.p2	AK086696|Akap7|432442|A kinase (PRKA) anchor protein 7	AK085630|Akap7|432442|A kinase (PRKA) anchor protein 7	AK139238|Akap7|432442|A kinase (PRKA) anchor protein 7
mm9_v1_chr12_+_110783786_110783839	1.06467	EOMES.p2	BC048191|Meg3|17263|maternally expressed 3
mm9_v1_chr17_-_90436488_90436574	1.03953	EOMES.p2	AJ006802|Nrxn1|18189|neurexin I
mm9_v1_chr3_+_145421870_145422044	1.01263	EOMES.p2	AK149185|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1
mm9_v1_chr17_+_21093929_21094049	0.931066	EOMES.p2	AK178876|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
mm9_v1_chr17_+_23957239_23957390	0.911742	EOMES.p2	BC027781|Srrm2|75956|serine/arginine repetitive matrix 2
mm9_v1_chr5_+_19413335_19413335	0.907283	EOMES.p2	AK147530|Magi2|50791|membrane associated guanylate kinase, WW and PDZ domain containing 2	NM_001170745|Magi2|50791|membrane associated guanylate kinase, WW and PDZ domain containing 2	NM_015823|Magi2|50791|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm9_v1_chr6_-_127075853_127076093	0.899508	EOMES.p2	AK193960|Ccnd2|12444|cyclin D2	AK011429|Ccnd2|12444|cyclin D2	AK009602|Ccnd2|12444|cyclin D2
mm9_v1_chr7_+_26052714_26052731	0.88668	EOMES.p2	AK147535|Cic|71722|capicua homolog (Drosophila)
mm9_v1_chr2_-_12933305_12933373	0.875741	EOMES.p2	AB044560|C1ql3|227580|C1q-like 3
mm9_v1_chr6_-_94650118_94650173	0.862637	EOMES.p2	D78572|Lrig1|16206|leucine-rich repeats and immunoglobulin-like domains 1	NM_008377|Lrig1|16206|leucine-rich repeats and immunoglobulin-like domains 1
mm9_v1_chr11_-_100621034_100621091	0.842304	EOMES.p2	BC150990|Kcnh4|380728|potassium voltage-gated channel, subfamily H (eag-related), member 4	BC150994|Kcnh4|380728|potassium voltage-gated channel, subfamily H (eag-related), member 4	NM_001081194|Kcnh4|380728|potassium voltage-gated channel, subfamily H (eag-related), member 4
mm9_v1_chr6_+_114081227_114081234	0.78047	EOMES.p2	AK140423|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	AK053078|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	NM_172890|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
mm9_v1_chr10_+_122701051_122701245	0.746425	EOMES.p2	AK139403|Fam19a2|268354|family with sequence similarity 19, member A2	NM_182807|Fam19a2|268354|family with sequence similarity 19, member A2	AK140763|Fam19a2|268354|family with sequence similarity 19, member A2	BC027082|Fam19a2|268354|family with sequence similarity 19, member A2
mm9_v1_chr8_+_86671936_86672150	0.708417	EOMES.p2	NM_001163752|4930432K21Rik|74666|RIKEN cDNA 4930432K21 gene	NM_029045|4930432K21Rik|74666|RIKEN cDNA 4930432K21 gene	AK172075|4930432K21Rik|74666|RIKEN cDNA 4930432K21 gene	BC075658|4930432K21Rik|74666|RIKEN cDNA 4930432K21 gene	AK015293|4930432K21Rik|74666|RIKEN cDNA 4930432K21 gene
mm9_v1_chr2_+_181287207_181287250	0.703757	EOMES.p2	AK135001|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5
mm9_v1_chr2_-_57034164_57034231	0.695191	EOMES.p2	AK163349|BB557941|767815|expressed sequence BB557941
mm9_v1_chr8_-_86671651_86671718	0.675066	EOMES.p2	BC016188|Cc2d1a|212139|coiled-coil and C2 domain containing 1A	NM_145970|Cc2d1a|212139|coiled-coil and C2 domain containing 1A
mm9_v1_chr5_-_143667004_143667334	0.598738	EOMES.p2	AK218610|Actb|11461|actin, beta	AK206771|Actb|11461|actin, beta	AK208252|Actb|11461|actin, beta	AK202772|Actb|11461|actin, beta	M12481|Actb|11461|actin, beta	X03765|Actb|11461|actin, beta	EF095208|Actb|11461|actin, beta
mm9_v1_chr1_-_166368439_166368560	0.59589	EOMES.p2	EF437334|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chr19_-_6982094_6982140	0.558351	EOMES.p2	BC014682|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr12_-_76697148_76697159	0.552955	EOMES.p2	AK088366|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm9_v1_chr2_+_155213904_155214229	0.551685	EOMES.p2	AK194878|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK201306|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK212674|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK213253|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK188182|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK191290|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK194673|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK204807|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK200413|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK212877|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr1_+_6792987_6793017	0.535974	EOMES.p2	BC032273|St18|240690|suppression of tumorigenicity 18
mm9_v1_chr5_-_31505192_31505291	0.533504	EOMES.p2	
mm9_v1_chr14_+_84843366_84843370	0.511708	EOMES.p2	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr15_-_75397601_75397641	0.490994	EOMES.p2	NM_011837|Ly6h|23934|lymphocyte antigen 6 complex, locus H
mm9_v1_chr18_+_45719101_45719122	0.489421	EOMES.p2	AK149082|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK039033|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
mm9_v1_chr7_+_19469999_19470074	0.482559	EOMES.p2	BC005582|Pglyrp1|21946|peptidoglycan recognition protein 1	AF076482|Pglyrp1|21946|peptidoglycan recognition protein 1	AK008335|Pglyrp1|21946|peptidoglycan recognition protein 1	NM_009402|Pglyrp1|21946|peptidoglycan recognition protein 1	X86374|Pglyrp1|21946|peptidoglycan recognition protein 1	AK043227|Pglyrp1|21946|peptidoglycan recognition protein 1	AF193843|Pglyrp1|21946|peptidoglycan recognition protein 1	CT010165|Pglyrp1|21946|peptidoglycan recognition protein 1
mm9_v1_chr9_-_49351134_49351163	0.481023	EOMES.p2	X59306|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr1_-_186696546_186696657	0.477902	EOMES.p2	BC129956|C130074G19Rik|226777|RIKEN cDNA C130074G19 gene
mm9_v1_chr18_-_43552694_43552984	0.469101	EOMES.p2	BC023003|Dpysl3|22240|dihydropyrimidinase-like 3	NM_009468|Dpysl3|22240|dihydropyrimidinase-like 3	X87817|Dpysl3|22240|dihydropyrimidinase-like 3
mm9_v1_chr11_+_69154265_69154342	0.463811	EOMES.p2	AK002962|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	AK045471|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	AB041807|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	BC021519|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene
mm9_v1_chr2_+_164773719_164773750	0.463148	EOMES.p2	D12712|Mmp9|17395|matrix metallopeptidase 9	AK142787|Mmp9|17395|matrix metallopeptidase 9	AK159292|Mmp9|17395|matrix metallopeptidase 9	AK161176|Mmp9|17395|matrix metallopeptidase 9	Z27231|Mmp9|17395|matrix metallopeptidase 9	AK004651|Mmp9|17395|matrix metallopeptidase 9	BC046991|Mmp9|17395|matrix metallopeptidase 9	NM_013599|Mmp9|17395|matrix metallopeptidase 9
mm9_v1_chr2_+_34631124_34631274	0.435119	EOMES.p2	M30779|Hspa5|14828|heat shock protein 5	M19351|Hspa5|14828|heat shock protein 5	AK198632|Hspa5|14828|heat shock protein 5	AK215158|Hspa5|14828|heat shock protein 5
mm9_v1_chr5_-_143666064_143666381	0.433169	EOMES.p2	AK218630|Actb|11461|actin, beta	BC040513|Actb|11461|actin, beta	AB028847|Actb|11461|actin, beta	AK212447|Actb|11461|actin, beta	AY618569|Actb|11461|actin, beta	U89400|Actb|11461|actin, beta	AK187650|Actb|11461|actin, beta	AK201181|Actb|11461|actin, beta	AK204356|Actb|11461|actin, beta	AK208556|Actb|11461|actin, beta
mm9_v1_chr7_+_116084192_116084237	0.42493	EOMES.p2	
mm9_v1_chr4_+_48058102_48058256	0.424869	EOMES.p2	BC038520|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3	BC068150|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3
mm9_v1_chr9_-_49311823_49311910	0.412872	EOMES.p2	X07233|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chrM_+_3320_3438	0.409495	EOMES.p2	
mm9_v1_chr16_-_50732795_50732886	0.407726	EOMES.p2	AK019912|5330426P16Rik|68190|RIKEN cDNA 5330426P16 gene	AK040285|5330426P16Rik|68190|RIKEN cDNA 5330426P16 gene	AK035047|5330426P16Rik|68190|RIKEN cDNA 5330426P16 gene	AK045752|5330426P16Rik|68190|RIKEN cDNA 5330426P16 gene	AK137010|5330426P16Rik|68190|RIKEN cDNA 5330426P16 gene	AK003970|5330426P16Rik|68190|RIKEN cDNA 5330426P16 gene	AK052569|5330426P16Rik|68190|RIKEN cDNA 5330426P16 gene	AK151508|5330426P16Rik|68190|RIKEN cDNA 5330426P16 gene
mm9_v1_chr5_-_3802874_3803076	0.402102	EOMES.p2	BC145510|Ankib1|70797|ankyrin repeat and IBR domain containing 1	BC145511|Ankib1|70797|ankyrin repeat and IBR domain containing 1	BC150792|Ankib1|70797|ankyrin repeat and IBR domain containing 1	AK129343|Ankib1|70797|ankyrin repeat and IBR domain containing 1
mm9_v1_chr12_-_76697214_76697220	0.400922	EOMES.p2	AK078894|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform	AK132432|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm9_v1_chr6_+_125502943_125502970	0.391436	EOMES.p2	AK157296|Vwf|22371|Von Willebrand factor homolog
mm9_v1_chr7_-_25772525_25772570	0.391102	EOMES.p2	BC040512|Atp1a3|232975|ATPase, Na+/K+ transporting, alpha 3 polypeptide
mm9_v1_chrM_+_7714_7790	0.389091	EOMES.p2	AF093677|ATP6|17705|ATP synthase F0 subunit 6	BC069931|Gm10925|100191075|predicted gene 10925
mm9_v1_chr18_+_37968450_37968553	0.387703	EOMES.p2	AK193109|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr10_+_127832280_127832285	0.380415	EOMES.p2	
mm9_v1_chrX_+_45976982_45977308	0.373438	EOMES.p2	NM_001166450|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	BC048692|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155812|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155813|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr4_-_118954780_118955048	0.370166	EOMES.p2	AK213887|Ybx1|22608|Y box protein 1	AK208509|Ybx1|22608|Y box protein 1	AK212502|Ybx1|22608|Y box protein 1
mm9_v1_chr18_+_45719464_45719553	0.369399	EOMES.p2	AK087908|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK050390|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
mm9_v1_chr5_-_115750649_115750671	0.355276	EOMES.p2	BC085492|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr6_+_114081375_114081412	0.34697	EOMES.p2	AK053261|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	AK021402|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
mm9_v1_chr5_-_143665474_143665607	0.3464	EOMES.p2	
mm9_v1_chrX_-_147091911_147092125	0.340605	EOMES.p2	AK047777|Tro|56191|trophinin	AB036783|Tro|56191|trophinin	AF288605|Tro|56191|trophinin	AF288606|Tro|56191|trophinin	NM_001002272|Tro|56191|trophinin	NM_019548|Tro|56191|trophinin	BC075630|Tro|56191|trophinin
mm9_v1_chr18_+_10325174_10325177	0.339775	EOMES.p2	AK142556|Greb1l|381157|growth regulation by estrogen in breast cancer-like	NM_001083628|Greb1l|381157|growth regulation by estrogen in breast cancer-like
mm9_v1_chr17_-_65944300_65944335	0.337344	EOMES.p2	AK149040|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr11_-_49488485_49488495	0.321062	EOMES.p2	AK039164|Cnot6|104625|CCR4-NOT transcription complex, subunit 6	AK169707|Cnot6|104625|CCR4-NOT transcription complex, subunit 6
mm9_v1_chr11_+_78139476_78139615	0.319886	EOMES.p2	AJ132391|Aldoc|11676|aldolase C, fructose-bisphosphate
mm9_v1_chrX_+_133200913_133200976	0.319873	EOMES.p2	NM_001029978|Tceal3|594844|transcription elongation factor A (SII)-like 3	AK158996|Tceal3|594844|transcription elongation factor A (SII)-like 3
mm9_v1_chr2_-_32136262_32136304	0.319048	EOMES.p2	
mm9_v1_chr10_-_42893894_42894226	0.318846	EOMES.p2	DQ157775|Sobp|109205|sine oculis-binding protein homolog (Drosophila)	BC057055|Sobp|109205|sine oculis-binding protein homolog (Drosophila)
mm9_v1_chr8_+_97530174_97530212	0.31884	EOMES.p2	AK182857|Gpr56|14766|G protein-coupled receptor 56
mm9_v1_chr13_+_54605152_54605165	0.318197	EOMES.p2	NM_176987|4732471D19Rik|319719|RIKEN cDNA 4732471D19 gene
mm9_v1_chr2_+_162760505_162760606	0.30934	EOMES.p2	
mm9_v1_chr12_+_101447480_101447584	0.303163	EOMES.p2	BC021618|Calm1|12313|calmodulin 1
mm9_v1_chr12_+_37040755_37040991	0.301244	EOMES.p2	NM_025312|Sostdc1|66042|sclerostin domain containing 1	AK002240|Sostdc1|66042|sclerostin domain containing 1	AK002396|Sostdc1|66042|sclerostin domain containing 1	AK007893|Sostdc1|66042|sclerostin domain containing 1	AK007967|Sostdc1|66042|sclerostin domain containing 1	AY255635|Sostdc1|66042|sclerostin domain containing 1	AY134666|Sostdc1|66042|sclerostin domain containing 1	BC021458|Sostdc1|66042|sclerostin domain containing 1	AB059271|Sostdc1|66042|sclerostin domain containing 1	AK007935|Sostdc1|66042|sclerostin domain containing 1
mm9_v1_chr6_-_24905939_24906124	0.300046	EOMES.p2	BC147241|Tmem229a|319832|transmembrane protein 229A	BC147242|Tmem229a|319832|transmembrane protein 229A	AK140056|Tmem229a|319832|transmembrane protein 229A	AK087465|Tmem229a|319832|transmembrane protein 229A	NM_177013|Tmem229a|319832|transmembrane protein 229A
mm9_v1_chr18_+_61123204_61123218	0.299436	EOMES.p2	NM_009792|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X87142|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr6_-_115625875_115625915	0.298673	EOMES.p2	AB057663|Raf1|110157|v-raf-leukemia viral oncogene 1	AB077145|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr7_+_86956134_86956146	0.295969	EOMES.p2	AK146740|Mesp2|17293|mesoderm posterior 2
mm9_v1_chr4_-_153532466_153532665	0.295847	EOMES.p2	AK182064|Tprgl|67808|transformation related protein 63 regulated like
mm9_v1_chr13_-_97312427_97312533	0.295184	EOMES.p2	AB027563|Polk|27015|polymerase (DNA directed), kappa	AF163571|Polk|27015|polymerase (DNA directed), kappa	NM_012048|Polk|27015|polymerase (DNA directed), kappa	AK138299|Polk|27015|polymerase (DNA directed), kappa	BC052820|Polk|27015|polymerase (DNA directed), kappa	AK042272|Polk|27015|polymerase (DNA directed), kappa
mm9_v1_chr13_-_43399540_43399575	0.294572	EOMES.p2	AK147458|Gfod1|328232|glucose-fructose oxidoreductase domain containing 1	NM_001033399|Gfod1|328232|glucose-fructose oxidoreductase domain containing 1
mm9_v1_chr14_-_68742863_68742903	0.293998	EOMES.p2	BC128564|Nefm|18040|neurofilament, medium polypeptide	BC119602|Nefm|18040|neurofilament, medium polypeptide	DQ201636|Nefm|18040|neurofilament, medium polypeptide	BC058333|Nefm|18040|neurofilament, medium polypeptide	AK051696|Nefm|18040|neurofilament, medium polypeptide	AK018234|Nefm|18040|neurofilament, medium polypeptide	AK051296|Nefm|18040|neurofilament, medium polypeptide	AK080794|Nefm|18040|neurofilament, medium polypeptide	AK164318|Nefm|18040|neurofilament, medium polypeptide	AK165041|Nefm|18040|neurofilament, medium polypeptide	BC052352|Nefm|18040|neurofilament, medium polypeptide
mm9_v1_chrX_+_135751704_135751704	0.293117	EOMES.p2	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr4_-_57929087_57929168	0.292821	EOMES.p2	BC030929|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK085537|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	BC095953|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	NM_178727|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK035369|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene
mm9_v1_chr3_-_158224306_158224367	0.292531	EOMES.p2	AK052066|Lrrc7|242274|leucine rich repeat containing 7	AK122498|Lrrc7|242274|leucine rich repeat containing 7
mm9_v1_chr2_+_121135107_121135172	0.290668	EOMES.p2	AK079600|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr1_-_134287712_134287857	0.288395	EOMES.p2	AK172957|Tmcc2|68875|transmembrane and coiled-coil domains 2	BC052035|Tmcc2|68875|transmembrane and coiled-coil domains 2	NM_178874|Tmcc2|68875|transmembrane and coiled-coil domains 2
mm9_v1_chr11_+_75546480_75546532	0.286416	EOMES.p2	D87663|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AF483478|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AF483479|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr8_+_49195311_49195555	0.286259	EOMES.p2	NM_178788|Dctd|320685|dCMP deaminase	AK031645|Dctd|320685|dCMP deaminase	AK077663|Dctd|320685|dCMP deaminase	NM_001161515|Dctd|320685|dCMP deaminase	AK171894|Dctd|320685|dCMP deaminase	BC031719|Dctd|320685|dCMP deaminase	AK039066|Dctd|320685|dCMP deaminase
mm9_v1_chr1_-_36864987_36865029	0.285658	EOMES.p2	BC120906|Tmem131|56030|transmembrane protein 131	BC139734|Tmem131|56030|transmembrane protein 131
mm9_v1_chr16_-_67621054_67621188	0.285617	EOMES.p2	AK046800|Cadm2|239857|cell adhesion molecule 2	AK163636|Cadm2|239857|cell adhesion molecule 2	AK038842|Cadm2|239857|cell adhesion molecule 2	AK043760|Cadm2|239857|cell adhesion molecule 2	AK165030|Cadm2|239857|cell adhesion molecule 2	NM_001145977|Cadm2|239857|cell adhesion molecule 2	NM_178721|Cadm2|239857|cell adhesion molecule 2
mm9_v1_chr17_+_29230715_29230763	0.282939	EOMES.p2	AK139306|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK149910|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK170467|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	NM_007669|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK007630|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK089093|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	U24173|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	BC002043|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr5_+_13125413_13125592	0.27927	EOMES.p2	AK166127|LOC100503462|100503462|hypothetical LOC100503462	AK052051|LOC100503462|100503462|hypothetical LOC100503462
mm9_v1_chr9_-_26816373_26816466	0.279039	EOMES.p2	AK216030|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	AK007456|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)
mm9_v1_chr18_+_38456280_38456312	0.278482	EOMES.p2	NM_001164622|Rnf14|56736|ring finger protein 14	NM_020012|Rnf14|56736|ring finger protein 14
mm9_v1_chr3_+_75361454_75361503	0.277868	EOMES.p2	NM_009250|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AK032152|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AK133770|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	BC006776|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AJ001700|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1
mm9_v1_chr17_-_45705198_45705339	0.276575	EOMES.p2	AK192311|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr4_+_115894199_115894212	0.275631	EOMES.p2	AK135693|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm9_v1_chr19_-_7557678_7557684	0.275327	EOMES.p2	BC036717|Rtn3|20168|reticulon 3	BC005478|Rtn3|20168|reticulon 3
mm9_v1_chr8_-_87542451_87542752	0.274603	EOMES.p2	AK212827|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK183718|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK193379|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK180403|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK205686|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK216431|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)
mm9_v1_chr4_-_132066370_132066424	0.272009	EOMES.p2	BC005672|Sesn2|230784|sestrin 2	NM_144907|Sesn2|230784|sestrin 2	AK170228|Sesn2|230784|sestrin 2	AK170547|Sesn2|230784|sestrin 2	AK143788|Sesn2|230784|sestrin 2
mm9_v1_chr11_-_74710462_74710503	0.27192	EOMES.p2	AK122273|Sgsm2|97761|small G protein signaling modulator 2
mm9_v1_chr1_-_31006599_31006606	0.270989	EOMES.p2	AK148288|Ptp4a1|19243|protein tyrosine phosphatase 4a1	NM_011200|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr6_-_60778740_60778989	0.26439	EOMES.p2	BC046764|Snca|20617|synuclein, alpha	AK156316|Snca|20617|synuclein, alpha	AK014472|Snca|20617|synuclein, alpha	AF033261|Snca|20617|synuclein, alpha	NM_001042451|Snca|20617|synuclein, alpha
mm9_v1_chr12_-_76697166_76697196	0.263693	EOMES.p2	BC094387|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform	AK220163|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform	BC085149|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform	NM_012024|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm9_v1_chr11_-_120422109_120422348	0.262841	EOMES.p2	AK199305|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK207358|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK215989|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK192153|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK198572|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK194021|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK197388|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK198858|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK199711|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK200927|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr9_+_15043488_15043639	0.259056	EOMES.p2	AK008621|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene	AK034938|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene	NM_026955|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene	BC055786|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene
mm9_v1_chr5_+_138187390_138187596	0.256501	EOMES.p2	AK143608|Tsc22d4|78829|TSC22 domain family, member 4	AK079510|Tsc22d4|78829|TSC22 domain family, member 4	AF201286|Tsc22d4|78829|TSC22 domain family, member 4	AK201891|Tsc22d4|78829|TSC22 domain family, member 4	AK154490|Tsc22d4|78829|TSC22 domain family, member 4
mm9_v1_chr18_+_37644674_37644812	0.254113	EOMES.p2	BC017149|Pcdhb17|93888|protocadherin beta 17	NM_053142|Pcdhb17|93888|protocadherin beta 17	AK077255|Pcdhb17|93888|protocadherin beta 17	AF326310|Pcdhb17|93888|protocadherin beta 17	AY013778|Pcdhb17|93888|protocadherin beta 17
mm9_v1_chr9_-_58050340_58050340	0.253555	EOMES.p2	NM_001161538|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chrX_-_131285919_131285957	0.253321	EOMES.p2	BC027264|Armcx6|278097|armadillo repeat containing, X-linked 6	AK148507|Armcx6|278097|armadillo repeat containing, X-linked 6	AK160766|Armcx6|278097|armadillo repeat containing, X-linked 6	NM_001007578|Armcx6|278097|armadillo repeat containing, X-linked 6
mm9_v1_chr2_+_121134843_121134847	0.253133	EOMES.p2	AK018185|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr6_+_42236683_42236858	0.249864	EOMES.p2	AK036735|Clcn1|12723|chloride channel 1	NM_013491|Clcn1|12723|chloride channel 1	BC114336|Clcn1|12723|chloride channel 1	AY046403|Clcn1|12723|chloride channel 1	AY046404|Clcn1|12723|chloride channel 1
mm9_v1_chr9_-_107516538_107516684	0.249125	EOMES.p2	
mm9_v1_chr3_+_66789859_66789903	0.247606	EOMES.p2	BC043045|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr5_-_122907269_122907331	0.247119	EOMES.p2	AK195483|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK198267|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK202908|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK209825|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC022584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr2_-_168427037_168427156	0.24701	EOMES.p2	EU887581|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887587|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887593|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887599|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK083119|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887583|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887585|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887589|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887591|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887595|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887597|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887601|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887603|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037178|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK044489|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr11_-_116711807_116712035	0.246992	EOMES.p2	AK211203|Srsf2|20382|serine/arginine-rich splicing factor 2	AK207032|Srsf2|20382|serine/arginine-rich splicing factor 2	AK212169|Srsf2|20382|serine/arginine-rich splicing factor 2	AK220014|Srsf2|20382|serine/arginine-rich splicing factor 2	AF250134|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr4_-_100854453_100854462	0.246715	EOMES.p2	AK181063|Jak1|16451|Janus kinase 1
mm9_v1_chr11_+_23978110_23978267	0.245941	EOMES.p2	AK140949|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF051525|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169036|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169037|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK122557|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF186018|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK004395|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK043677|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	BC051418|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr8_-_25549415_25549421	0.243952	EOMES.p2	AK007441|1810011O10Rik|69068|RIKEN cDNA 1810011O10 gene	NM_026931|1810011O10Rik|69068|RIKEN cDNA 1810011O10 gene
mm9_v1_chr2_+_143371807_143372226	0.242616	EOMES.p2	AK158598|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK133620|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	NM_008792|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC057348|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK158493|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK161585|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC052013|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK039783|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	M55669|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483512|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483513|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2
mm9_v1_chr4_-_63681749_63681759	0.241652	EOMES.p2	BC117979|Tnc|21923|tenascin C	BC117980|Tnc|21923|tenascin C	NM_011607|Tnc|21923|tenascin C	X56304|Tnc|21923|tenascin C
mm9_v1_chr18_-_46372017_46372260	0.240245	EOMES.p2	AY251389|Trim36|28105|tripartite motif-containing 36	AB103063|Trim36|28105|tripartite motif-containing 36	BC058106|Trim36|28105|tripartite motif-containing 36	NM_178872|Trim36|28105|tripartite motif-containing 36
mm9_v1_chr12_-_76697229_76697243	0.239467	EOMES.p2	AK053228|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform	AK133824|Ppp2r5e|26932|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm9_v1_chr1_-_133141708_133141776	0.238275	EOMES.p2	AF053959|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AK005059|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AK155534|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	AK029321|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	BC089605|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5	NM_018750|Rassf5|54354|Ras association (RalGDS/AF-6) domain family member 5
mm9_v1_chr11_+_95198329_95198359	0.236288	EOMES.p2	AK077747|Fam117a|215512|family with sequence similarity 117, memberA	AK143632|Fam117a|215512|family with sequence similarity 117, memberA	AK165378|Fam117a|215512|family with sequence similarity 117, memberA	AK167417|Fam117a|215512|family with sequence similarity 117, memberA	NM_172543|Fam117a|215512|family with sequence similarity 117, memberA	BC055690|Fam117a|215512|family with sequence similarity 117, memberA
mm9_v1_chr3_+_108163704_108163812	0.234946	EOMES.p2	AK013673|Sort1|20661|sortilin 1
mm9_v1_chr1_+_169528706_169528770	0.234812	EOMES.p2	X66225|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr9_-_58049765_58049823	0.233316	EOMES.p2	AK129367|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr8_-_11199802_11199859	0.231684	EOMES.p2	X92439|Col4a1|12826|collagen, type IV, alpha 1
mm9_v1_chr4_-_63156984_63157036	0.229576	EOMES.p2	AY739114|Whrn|73750|whirlin	AY739115|Whrn|73750|whirlin	AY739116|Whrn|73750|whirlin	AY739117|Whrn|73750|whirlin	AY739118|Whrn|73750|whirlin	AY739119|Whrn|73750|whirlin	AY739120|Whrn|73750|whirlin	NM_001008791|Whrn|73750|whirlin	NM_001008792|Whrn|73750|whirlin	NM_001008793|Whrn|73750|whirlin	NM_001008794|Whrn|73750|whirlin	NM_001008795|Whrn|73750|whirlin	NM_001008796|Whrn|73750|whirlin	NM_028640|Whrn|73750|whirlin	AK157955|Whrn|73750|whirlin
mm9_v1_chr16_-_94509462_94509462	0.228253	EOMES.p2	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr15_+_79177959_79178004	0.226932	EOMES.p2	AK156896|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chrX_-_133267605_133267741	0.225868	EOMES.p2	
mm9_v1_chr3_-_115955629_115955694	0.225512	EOMES.p2	BC157981|Gpr88|64378|G-protein coupled receptor 88	BC051941|Gpr88|64378|G-protein coupled receptor 88
mm9_v1_chr2_+_163051189_163051200	0.224726	EOMES.p2	NM_001098799|Tox2|269389|TOX high mobility group box family member 2
mm9_v1_chr11_-_59025422_59025528	0.224547	EOMES.p2	AK211704|Arf1|11840|ADP-ribosylation factor 1	AK195749|Arf1|11840|ADP-ribosylation factor 1
mm9_v1_chr16_-_11220854_11220973	0.223797	EOMES.p2	AK218484|Gspt1|14852|G1 to S phase transition 1
mm9_v1_chr9_+_15043658_15043696	0.222983	EOMES.p2	AK161045|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene
mm9_v1_chr1_+_174012641_174012773	0.221948	EOMES.p2	NM_009938|Copa|12847|coatomer protein complex subunit alpha	AK162632|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr9_-_108476927_108477095	0.221183	EOMES.p2	AK194255|Wdr6|83669|WD repeat domain 6
mm9_v1_chr6_-_87793459_87793650	0.221108	EOMES.p2	AK211658|Cnbp|12785|cellular nucleic acid binding protein	BC003805|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr7_-_34977928_34978057	0.220923	EOMES.p2	BC025090|Pdcd2l|68079|programmed cell death 2-like	BC038524|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr5_+_115751128_115751148	0.220681	EOMES.p2	
mm9_v1_chr1_-_193007202_193007214	0.220466	EOMES.p2	BC019946|Atf3|11910|activating transcription factor 3	NM_007498|Atf3|11910|activating transcription factor 3	AK133965|Atf3|11910|activating transcription factor 3
mm9_v1_chr7_-_116073666_116073691	0.220244	EOMES.p2	AK032446|Nlrp10|244202|NLR family, pyrin domain containing 10	BC113194|Nlrp10|244202|NLR family, pyrin domain containing 10	BC113801|Nlrp10|244202|NLR family, pyrin domain containing 10	AK028802|Nlrp10|244202|NLR family, pyrin domain containing 10	NM_175532|Nlrp10|244202|NLR family, pyrin domain containing 10	AK028575|Nlrp10|244202|NLR family, pyrin domain containing 10
mm9_v1_chr18_+_23468585_23468619	0.218949	EOMES.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr8_+_116167112_116167131	0.218729	EOMES.p2	AY899935|Syce1l|668110|synaptonemal complex central element protein 1 like	AY899936|Syce1l|668110|synaptonemal complex central element protein 1 like	BC141326|Syce1l|668110|synaptonemal complex central element protein 1 like	BC141347|Syce1l|668110|synaptonemal complex central element protein 1 like	NM_001048145|Syce1l|668110|synaptonemal complex central element protein 1 like	NM_029139|Syce1l|668110|synaptonemal complex central element protein 1 like	AK015606|Syce1l|668110|synaptonemal complex central element protein 1 like	BC100478|Syce1l|668110|synaptonemal complex central element protein 1 like
mm9_v1_chr11_-_6328316_6328333	0.216848	EOMES.p2	
mm9_v1_chr15_-_48623520_48623540	0.214764	EOMES.p2	AK140264|Csmd3|239420|CUB and Sushi multiple domains 3	AK163122|Csmd3|239420|CUB and Sushi multiple domains 3	NM_001081391|Csmd3|239420|CUB and Sushi multiple domains 3
mm9_v1_chr3_+_105255444_105255490	0.214131	EOMES.p2	AK033962|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr2_-_77541328_77541435	0.212626	EOMES.p2	BC048543|Zfp385b|241494|zinc finger protein 385B	NM_001113399|Zfp385b|241494|zinc finger protein 385B	AK047859|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr6_+_148303173_148303234	0.211838	EOMES.p2	AK004068|Rps4y2|66184|ribosomal protein S4, Y-linked 2	AK012382|Rps4y2|66184|ribosomal protein S4, Y-linked 2	AK132160|Rps4y2|66184|ribosomal protein S4, Y-linked 2	BC047994|Rps4y2|66184|ribosomal protein S4, Y-linked 2
mm9_v1_chr1_+_38054854_38055019	0.211766	EOMES.p2	AK145732|Eif5b|226982|eukaryotic translation initiation factor 5B	NM_198303|Eif5b|226982|eukaryotic translation initiation factor 5B	AK163527|Eif5b|226982|eukaryotic translation initiation factor 5B	AK145146|Eif5b|226982|eukaryotic translation initiation factor 5B	BC103806|Eif5b|226982|eukaryotic translation initiation factor 5B	AK168377|Eif5b|226982|eukaryotic translation initiation factor 5B	BC040746|Eif5b|226982|eukaryotic translation initiation factor 5B	BC018347|Eif5b|226982|eukaryotic translation initiation factor 5B	BC060288|Eif5b|226982|eukaryotic translation initiation factor 5B
mm9_v1_chr2_+_162759135_162759161	0.209711	EOMES.p2	AK212807|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr11_+_120459734_120459836	0.208819	EOMES.p2	NM_025389|Anapc11|66156|anaphase promoting complex subunit 11	AK158224|Anapc11|66156|anaphase promoting complex subunit 11	AK003612|Anapc11|66156|anaphase promoting complex subunit 11	AK045408|Anapc11|66156|anaphase promoting complex subunit 11	AK003244|Anapc11|66156|anaphase promoting complex subunit 11	AK136358|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr10_+_28749890_28749938	0.20463	EOMES.p2	
mm9_v1_chr12_-_70260137_70260172	0.203836	EOMES.p2	NM_009093|Rps29|20090|ribosomal protein S29
mm9_v1_chr16_-_32868355_32868453	0.203724	EOMES.p2	BC057307|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK042428|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170223|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK122221|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK030368|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC060601|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	NM_172615|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170002|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK171583|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC067390|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene
mm9_v1_chr10_+_25949512_25949512	0.203373	EOMES.p2	AK082201|Samd3|268288|sterile alpha motif domain containing 3	BC150876|Samd3|268288|sterile alpha motif domain containing 3	NM_001013766|Samd3|268288|sterile alpha motif domain containing 3	NM_001115154|Samd3|268288|sterile alpha motif domain containing 3
mm9_v1_chr3_-_86352170_86352368	0.202642	EOMES.p2	BC046628|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK053645|Mab21l2|23937|mab-21-like 2 (C. elegans)	NM_011839|Mab21l2|23937|mab-21-like 2 (C. elegans)	BC058730|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK144373|Mab21l2|23937|mab-21-like 2 (C. elegans)
mm9_v1_chr3_-_75360749_75360821	0.20072	EOMES.p2	AK077308|Pdcd10|56426|programmed cell death 10
mm9_v1_chr19_-_8787313_8787393	0.199649	EOMES.p2	AK183775|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK180963|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr3_+_96433850_96433878	0.198139	EOMES.p2	NM_001102407|Rbm8a|60365|RNA binding motif protein 8a	NM_025875|Rbm8a|60365|RNA binding motif protein 8a	AK009953|Rbm8a|60365|RNA binding motif protein 8a	AK010284|Rbm8a|60365|RNA binding motif protein 8a	AK011215|Rbm8a|60365|RNA binding motif protein 8a	AK082925|Rbm8a|60365|RNA binding motif protein 8a	BC020086|Rbm8a|60365|RNA binding motif protein 8a	BC058376|Rbm8a|60365|RNA binding motif protein 8a
mm9_v1_chr2_+_84903869_84903875	0.197338	EOMES.p2	BC024499|Tnks1bp1|228140|tankyrase 1 binding protein 1
mm9_v1_chr10_+_98725871_98725972	0.195901	EOMES.p2	AK009131|Dusp6|67603|dual specificity phosphatase 6	AK159146|Dusp6|67603|dual specificity phosphatase 6	AK159900|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr4_+_28740314_28740475	0.19219	EOMES.p2	AK030480|Epha7|13841|Eph receptor A7	AK049848|Epha7|13841|Eph receptor A7	BC026153|Epha7|13841|Eph receptor A7	AK032973|Epha7|13841|Eph receptor A7
mm9_v1_chr11_+_28753190_28753243	0.191546	EOMES.p2	AK077302|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	NM_146015|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	AY251056|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr3_+_96023838_96023838	0.191437	EOMES.p2	NM_178213|Hist2h2ab|621893|histone cluster 2, H2ab
mm9_v1_chr6_+_135312948_135312972	0.191214	EOMES.p2	BC046299|Emp1|13730|epithelial membrane protein 1	NM_010128|Emp1|13730|epithelial membrane protein 1	X98403|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr9_-_35018552_35018624	0.187724	EOMES.p2	BC028892|Foxred1|235169|FAD-dependent oxidoreductase domain containing 1	AK144759|Foxred1|235169|FAD-dependent oxidoreductase domain containing 1	BC017604|Foxred1|235169|FAD-dependent oxidoreductase domain containing 1
mm9_v1_chr1_+_173053280_173053294	0.187711	EOMES.p2	BC061017|1700009P17Rik|75472|RIKEN cDNA 1700009P17 gene
mm9_v1_chrX_+_133200982_133201022	0.185301	EOMES.p2	AK003156|Tceal3|594844|transcription elongation factor A (SII)-like 3	AK017585|Tceal3|594844|transcription elongation factor A (SII)-like 3	BC027131|Tceal3|594844|transcription elongation factor A (SII)-like 3
mm9_v1_chr6_-_93863547_93863683	0.183125	EOMES.p2	AK163800|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083321|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC060273|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083320|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr16_-_5222390_5222400	0.182031	EOMES.p2	NM_001033220|AU021092|239691|expressed sequence AU021092
mm9_v1_chr3_-_127202153_127202192	0.180602	EOMES.p2	AK043034|Ank2|109676|ankyrin 2, brain
mm9_v1_chr13_-_89881804_89881848	0.178583	EOMES.p2	D28599|Vcan|13003|versican	D32040|Vcan|13003|versican
mm9_v1_chr1_-_137335507_137335652	0.178121	EOMES.p2	AK137320|Nav1|215690|neuron navigator 1
mm9_v1_chr19_+_5493612_5493771	0.177613	EOMES.p2	AK195534|Cfl1|12631|cofilin 1, non-muscle	AK198064|Cfl1|12631|cofilin 1, non-muscle	AK200194|Cfl1|12631|cofilin 1, non-muscle	AK208902|Cfl1|12631|cofilin 1, non-muscle	AK215762|Cfl1|12631|cofilin 1, non-muscle
mm9_v1_chr10_-_76172218_76172292	0.175875	EOMES.p2	AK029428|Col6a1|12833|collagen, type VI, alpha 1	AK027944|Col6a1|12833|collagen, type VI, alpha 1
mm9_v1_chr2_-_152142120_152142187	0.175307	EOMES.p2	
mm9_v1_chr4_-_126427788_126428041	0.174716	EOMES.p2	AK216583|Ncdn|26562|neurochondrin	AK122327|Ncdn|26562|neurochondrin
mm9_v1_chr12_-_103807640_103807779	0.174655	EOMES.p2	AK194177|Itpk1|217837|inositol 1,3,4-triphosphate 5/6 kinase
mm9_v1_chr15_+_12082671_12082674	0.174619	EOMES.p2	AK158938|Zfr|22763|zinc finger RNA binding protein
mm9_v1_chr4_-_137869546_137869914	0.174491	EOMES.p2	AK219773|Pink1|68943|PTEN induced putative kinase 1	AK196813|Pink1|68943|PTEN induced putative kinase 1	AK190338|Pink1|68943|PTEN induced putative kinase 1	AK190010|Pink1|68943|PTEN induced putative kinase 1	AK219694|Pink1|68943|PTEN induced putative kinase 1	AK213324|Pink1|68943|PTEN induced putative kinase 1	AK218284|Pink1|68943|PTEN induced putative kinase 1	AK205601|Pink1|68943|PTEN induced putative kinase 1	AK182588|Pink1|68943|PTEN induced putative kinase 1	AK219274|Pink1|68943|PTEN induced putative kinase 1	AK179666|Pink1|68943|PTEN induced putative kinase 1
mm9_v1_chr1_+_60466568_60466597	0.174189	EOMES.p2	BC079545|Abi2|329165|abl-interactor 2
mm9_v1_chr1_+_173319048_173319419	0.17388	EOMES.p2	AK147757|Arhgap30|226652|Rho GTPase activating protein 30	NM_001005508|Arhgap30|226652|Rho GTPase activating protein 30	AK156351|Arhgap30|226652|Rho GTPase activating protein 30	AK030911|Arhgap30|226652|Rho GTPase activating protein 30	BC082573|Arhgap30|226652|Rho GTPase activating protein 30	AK031319|Arhgap30|226652|Rho GTPase activating protein 30
mm9_v1_chr7_-_148629218_148629254	0.173195	EOMES.p2	BC145314|Lrdd|57913|leucine-rich and death domain containing	BC145315|Lrdd|57913|leucine-rich and death domain containing	BC145857|Lrdd|57913|leucine-rich and death domain containing	AF274973|Lrdd|57913|leucine-rich and death domain containing	NM_022654|Lrdd|57913|leucine-rich and death domain containing	BC032202|Lrdd|57913|leucine-rich and death domain containing
mm9_v1_chr16_+_20674298_20674336	0.172956	EOMES.p2	BC021441|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr10_+_80642896_80643136	0.171884	EOMES.p2	AK210872|Eef2|13629|eukaryotic translation elongation factor 2	AK209228|Eef2|13629|eukaryotic translation elongation factor 2	AK202124|Eef2|13629|eukaryotic translation elongation factor 2	AK187806|Eef2|13629|eukaryotic translation elongation factor 2	AK193965|Eef2|13629|eukaryotic translation elongation factor 2	AK198543|Eef2|13629|eukaryotic translation elongation factor 2	AK199188|Eef2|13629|eukaryotic translation elongation factor 2	AK199799|Eef2|13629|eukaryotic translation elongation factor 2	AK203090|Eef2|13629|eukaryotic translation elongation factor 2	AK205853|Eef2|13629|eukaryotic translation elongation factor 2	AK207466|Eef2|13629|eukaryotic translation elongation factor 2	AK216165|Eef2|13629|eukaryotic translation elongation factor 2	AK216384|Eef2|13629|eukaryotic translation elongation factor 2	AK205723|Eef2|13629|eukaryotic translation elongation factor 2	AK164406|Eef2|13629|eukaryotic translation elongation factor 2	AK189872|Eef2|13629|eukaryotic translation elongation factor 2	AK195340|Eef2|13629|eukaryotic translation elongation factor 2	AK206829|Eef2|13629|eukaryotic translation elongation factor 2	AK207351|Eef2|13629|eukaryotic translation elongation factor 2	AK211185|Eef2|13629|eukaryotic translation elongation factor 2	AK217298|Eef2|13629|eukaryotic translation elongation factor 2	AK217627|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr18_-_65553541_65553541	0.171794	EOMES.p2	NM_001037294|Alpk2|225638|alpha-kinase 2
mm9_v1_chr11_-_3245718_3245858	0.171471	EOMES.p2	AK038530|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr12_+_110806715_110806837	0.171414	EOMES.p2	AK148955|Meg3|17263|maternally expressed 3
mm9_v1_chr5_-_138227400_138227490	0.171288	EOMES.p2	BC026876|Mepce|231803|methylphosphate capping enzyme
mm9_v1_chr18_-_12394814_12394820	0.171053	EOMES.p2	AK154282|Npc1|18145|Niemann Pick type C1	AK155379|Npc1|18145|Niemann Pick type C1
mm9_v1_chr10_-_61802814_61802882	0.170779	EOMES.p2	AK214520|Hk1|15275|hexokinase 1	J05277|Hk1|15275|hexokinase 1	BC027316|Hk1|15275|hexokinase 1	AK149749|Hk1|15275|hexokinase 1
mm9_v1_chr1_-_95311418_95311537	0.170742	EOMES.p2	BC046545|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr4_-_49857952_49857952	0.170395	EOMES.p2	NM_001033351|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chr9_-_58049842_58049944	0.170335	EOMES.p2	EU497918|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2	BC059068|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr4_+_144482979_144483095	0.169151	EOMES.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr5_-_114292851_114293254	0.168458	EOMES.p2	AK201602|Coro1c|23790|coronin, actin binding protein 1C
mm9_v1_chr19_-_8787823_8787985	0.168335	EOMES.p2	AK215373|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK156285|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr4_+_106721017_106721031	0.167151	EOMES.p2	AK144320|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr8_+_65430028_65430291	0.167017	EOMES.p2	AJ278998|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK049843|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK220280|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK013644|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC017601|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	NM_023689|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	AK164338|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	BC053334|Spock3|72902|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
mm9_v1_chr2_+_174167321_174167402	0.166868	EOMES.p2	
mm9_v1_chr14_+_63756868_63756897	0.165961	EOMES.p2	AK192818|Ctsb|13030|cathepsin B	AK196522|Ctsb|13030|cathepsin B
mm9_v1_chr6_-_51416921_51416984	0.165252	EOMES.p2	BC059107|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr6_+_113442698_113442948	0.164525	EOMES.p2	
mm9_v1_chr17_-_36304646_36304671	0.163769	EOMES.p2	AB267095|Gm8909|667977|predicted gene 8909
mm9_v1_chr3_-_94386590_94386623	0.163276	EOMES.p2	AK147452|Snx27|76742|sorting nexin family member 27	NM_001082484|Snx27|76742|sorting nexin family member 27	NM_029721|Snx27|76742|sorting nexin family member 27
mm9_v1_chr7_-_118214471_118214595	0.16327	EOMES.p2	AK153701|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2
mm9_v1_chr8_+_12915892_12915957	0.157473	EOMES.p2	NM_178076|Mcf2l|17207|mcf.2 transforming sequence-like	AK082849|Mcf2l|17207|mcf.2 transforming sequence-like	AK048898|Mcf2l|17207|mcf.2 transforming sequence-like	BC058622|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr4_-_108311676_108311740	0.157347	EOMES.p2	
mm9_v1_chr11_-_70465629_70465690	0.155854	EOMES.p2	AJ279848|Pfn1|18643|profilin 1
mm9_v1_chr4_+_144482722_144482729	0.155812	EOMES.p2	BC008980|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_001172424|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr2_+_152695336_152695453	0.153959	EOMES.p2	AK167030|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK011311|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm9_v1_chr2_+_71819264_71819343	0.153619	EOMES.p2	AK220281|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AB021132|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK161934|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AK017479|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	AF115480|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	BC139822|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4	NM_019688|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr3_+_66789587_66789619	0.152764	EOMES.p2	AK012100|Rsrc1|66880|arginine/serine-rich coiled-coil 1	NM_025822|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK005242|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK043731|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK045433|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr18_-_61874531_61874583	0.152379	EOMES.p2	BC024866|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr2_+_156698083_156698153	0.151417	EOMES.p2	AK184175|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK189929|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene
mm9_v1_chr6_+_83745142_83745245	0.149626	EOMES.p2	NM_001164187|Nagk|56174|N-acetylglucosamine kinase	AK155292|Nagk|56174|N-acetylglucosamine kinase	BC004689|Nagk|56174|N-acetylglucosamine kinase	AJ242911|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chr7_+_54110679_54110700	0.147569	EOMES.p2	
mm9_v1_chr5_-_123183255_123183351	0.147537	EOMES.p2	AK050846|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr2_+_121115337_121115465	0.144888	EOMES.p2	AF182213|Mtap1a|17754|microtubule-associated protein 1 A	NM_032393|Mtap1a|17754|microtubule-associated protein 1 A	AK044057|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr1_+_74283325_74283370	0.143067	EOMES.p2	BC115750|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr9_-_95745663_95745697	0.142317	EOMES.p2	AK133070|Pls1|102502|plastin 1 (I-isoform)	NM_001033210|Pls1|102502|plastin 1 (I-isoform)
mm9_v1_chrX_+_97925185_97925339	0.142187	EOMES.p2	NM_023608|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	AK031379|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	BC038274|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	AB048364|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2
mm9_v1_chr12_-_32319353_32319551	0.141735	EOMES.p2	BC003303|Bcap29|12033|B-cell receptor-associated protein 29	BC021661|Bcap29|12033|B-cell receptor-associated protein 29	NM_007530|Bcap29|12033|B-cell receptor-associated protein 29	AK090068|Bcap29|12033|B-cell receptor-associated protein 29	AK144754|Bcap29|12033|B-cell receptor-associated protein 29	NM_001164090|Bcap29|12033|B-cell receptor-associated protein 29
mm9_v1_chr10_+_126504125_126504226	0.141631	EOMES.p2	
mm9_v1_chr4_+_11631592_11631656	0.140887	EOMES.p2	AK157655|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK158393|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK168401|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	NM_010276|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK153999|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK169699|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	U13053|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	BC029668|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK171336|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)
mm9_v1_chr15_-_96886327_96886398	0.140716	EOMES.p2	AK164292|Slc38a4|69354|solute carrier family 38, member 4	AK167539|Slc38a4|69354|solute carrier family 38, member 4	AK051023|Slc38a4|69354|solute carrier family 38, member 4	NM_027052|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr6_-_115573479_115573509	0.138394	EOMES.p2	AK190457|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr19_+_21347181_21347203	0.138104	EOMES.p2	AF062071|Zfand5|22682|zinc finger, AN1-type domain 5	BC107566|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chr6_-_38075416_38075515	0.137731	EOMES.p2	AK141785|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene
mm9_v1_chr6_-_53018566_53018625	0.136712	EOMES.p2	AK043767|Jazf1|231986|JAZF zinc finger 1	AK050474|Jazf1|231986|JAZF zinc finger 1	NM_173406|Jazf1|231986|JAZF zinc finger 1
mm9_v1_chr4_+_84530230_84530239	0.135696	EOMES.p2	NM_175275|Cntln|338349|centlein, centrosomal protein	NM_177385|Cntln|338349|centlein, centrosomal protein
mm9_v1_chr15_+_75824198_75824279	0.135494	EOMES.p2	BC048082|Mapk15|332110|mitogen-activated protein kinase 15	NM_177922|Mapk15|332110|mitogen-activated protein kinase 15
mm9_v1_chr4_+_41707315_41707331	0.135465	EOMES.p2	NM_001163401|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	NM_001172054|Il11ra1|16157|interleukin 11 receptor, alpha chain 1
mm9_v1_chr7_-_52071930_52072029	0.13335	EOMES.p2	AF312938|Atf5|107503|activating transcription factor 5	AF375475|Atf5|107503|activating transcription factor 5	BC092068|Atf5|107503|activating transcription factor 5	AF310624|Atf5|107503|activating transcription factor 5	AK131939|Atf5|107503|activating transcription factor 5	AK146479|Atf5|107503|activating transcription factor 5	AK159624|Atf5|107503|activating transcription factor 5
mm9_v1_chr2_-_180976663_180976720	0.132527	EOMES.p2	AK172227|BC006779|229003|cDNA sequence BC006779
mm9_v1_chr7_-_81429262_81429274	0.132301	EOMES.p2	AK020010|Slco3a1|108116|solute carrier organic anion transporter family, member 3a1
mm9_v1_chr2_+_155102040_155102281	0.132156	EOMES.p2	AK015020|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	NM_025735|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	AK003122|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	AK003716|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	BC010596|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha
mm9_v1_chr14_+_26484518_26484659	0.13206	EOMES.p2	AK132106|Gm10397|100038401|predicted gene 10397
mm9_v1_chr6_-_48790453_48790578	0.131934	EOMES.p2	AF115426|Tmem176b|65963|transmembrane protein 176B	AB031386|Tmem176b|65963|transmembrane protein 176B
mm9_v1_chr11_-_33743416_33743626	0.131898	EOMES.p2	AY647242|Kcnip1|70357|Kv channel-interacting protein 1	AY171234|Kcnip1|70357|Kv channel-interacting protein 1	BC034241|Kcnip1|70357|Kv channel-interacting protein 1	DQ148493|Kcnip1|70357|Kv channel-interacting protein 1	AK013657|Kcnip1|70357|Kv channel-interacting protein 1	AK014313|Kcnip1|70357|Kv channel-interacting protein 1	AK046398|Kcnip1|70357|Kv channel-interacting protein 1	AK045948|Kcnip1|70357|Kv channel-interacting protein 1	NM_001190885|Kcnip1|70357|Kv channel-interacting protein 1	NM_027398|Kcnip1|70357|Kv channel-interacting protein 1
mm9_v1_chr4_-_141430550_141430692	0.131514	EOMES.p2	AK195742|Efhd2|27984|EF hand domain containing 2
mm9_v1_chr1_-_128389495_128389552	0.131403	EOMES.p2	BC066095|Nckap5|210356|NCK-associated protein 5	BC079551|Nckap5|210356|NCK-associated protein 5	NM_172484|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr11_-_72609306_72609347	0.131244	EOMES.p2	BC086682|Cyb5d2|192986|cytochrome b5 domain containing 2	NM_001024926|Cyb5d2|192986|cytochrome b5 domain containing 2	AK142515|Cyb5d2|192986|cytochrome b5 domain containing 2
mm9_v1_chr10_+_80642620_80642797	0.131202	EOMES.p2	AK200910|Eef2|13629|eukaryotic translation elongation factor 2	AK201238|Eef2|13629|eukaryotic translation elongation factor 2	AK207352|Eef2|13629|eukaryotic translation elongation factor 2	AK192485|Eef2|13629|eukaryotic translation elongation factor 2	AK211322|Eef2|13629|eukaryotic translation elongation factor 2	AK217129|Eef2|13629|eukaryotic translation elongation factor 2	AK202379|Eef2|13629|eukaryotic translation elongation factor 2	AK191408|Eef2|13629|eukaryotic translation elongation factor 2	AK199168|Eef2|13629|eukaryotic translation elongation factor 2	AK210206|Eef2|13629|eukaryotic translation elongation factor 2	U89416|Eef2|13629|eukaryotic translation elongation factor 2	AK161993|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr14_+_21527175_21527259	0.130953	EOMES.p2	BC085161|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene
mm9_v1_chr9_-_50583599_50583624	0.130888	EOMES.p2	AK079767|1110032A03Rik|68721|RIKEN cDNA 1110032A03 gene
mm9_v1_chr14_-_57719048_57719093	0.130678	EOMES.p2	AK178984|Gjb2|14619|gap junction protein, beta 2	AK189228|Gjb2|14619|gap junction protein, beta 2
mm9_v1_chr5_+_138188092_138188197	0.130494	EOMES.p2	BC018544|Tsc22d4|78829|TSC22 domain family, member 4	AK144806|Tsc22d4|78829|TSC22 domain family, member 4
mm9_v1_chr14_-_100548982_100549014	0.129576	EOMES.p2	AB221575|Klf12|16597|Kruppel-like factor 12	Y14295|Klf12|16597|Kruppel-like factor 12	BC067408|Klf12|16597|Kruppel-like factor 12	NM_010636|Klf12|16597|Kruppel-like factor 12
mm9_v1_chr3_+_51219971_51220063	0.129439	EOMES.p2	AF510858|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	BC050017|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm9_v1_chr12_-_36219651_36219745	0.128138	EOMES.p2	AK153678|Ahr|11622|aryl-hydrocarbon receptor	NM_013464|Ahr|11622|aryl-hydrocarbon receptor	AK155380|Ahr|11622|aryl-hydrocarbon receptor
mm9_v1_chr1_-_192802869_192802928	0.127877	EOMES.p2	AK140989|Vash2|226841|vasohibin 2	NM_144879|Vash2|226841|vasohibin 2
mm9_v1_chr7_+_26682681_26682715	0.12742	EOMES.p2	BC060973|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	NM_009999|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	AF128849|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	M21856|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	X99715|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10
mm9_v1_chr14_+_14845004_14845173	0.126878	EOMES.p2	AK046679|Atxn7|246103|ataxin 7	NM_139227|Atxn7|246103|ataxin 7	BC137846|Atxn7|246103|ataxin 7
mm9_v1_chr18_+_83084023_83084023	0.126536	EOMES.p2	NM_001177464|Zfp516|329003|zinc finger protein 516
mm9_v1_chr2_+_13496394_13496520	0.125787	EOMES.p2	AK207271|Vim|22352|vimentin	AK012469|Vim|22352|vimentin
mm9_v1_chr3_+_94736993_94737043	0.124312	EOMES.p2	BC011202|Selenbp1|20341|selenium binding protein 1	NM_009150|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr1_-_39608846_39608882	0.124186	EOMES.p2	AK040602|Rnf149|67702|ring finger protein 149
mm9_v1_chr11_-_70458027_70458216	0.124131	EOMES.p2	AK206341|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK212009|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK178451|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK210712|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	AK214004|Slc25a11|67863|solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
mm9_v1_chrX_+_147778717_147778787	0.123989	EOMES.p2	AK030477|Fam120c|207375|family with sequence similarity 120, member C	AK086058|Fam120c|207375|family with sequence similarity 120, member C	AK156920|Fam120c|207375|family with sequence similarity 120, member C	AY150023|Fam120c|207375|family with sequence similarity 120, member C	AY150024|Fam120c|207375|family with sequence similarity 120, member C	BC137973|Fam120c|207375|family with sequence similarity 120, member C	BC171940|Fam120c|207375|family with sequence similarity 120, member C	NM_198105|Fam120c|207375|family with sequence similarity 120, member C	AK136727|Fam120c|207375|family with sequence similarity 120, member C	AK166381|Fam120c|207375|family with sequence similarity 120, member C
mm9_v1_chr5_-_31260302_31260437	0.123671	EOMES.p2	AK202976|Preb|50907|prolactin regulatory element binding	AK179426|Preb|50907|prolactin regulatory element binding	AK197590|Preb|50907|prolactin regulatory element binding	AK206719|Preb|50907|prolactin regulatory element binding
mm9_v1_chr10_-_79446784_79446797	0.123498	EOMES.p2	AY096036|ORF61|216157|open reading frame 61	AY096037|ORF61|216157|open reading frame 61
mm9_v1_chr18_+_61747381_61747495	0.122946	EOMES.p2	AK217508|Csnk1a1|93687|casein kinase 1, alpha 1	AK218260|Csnk1a1|93687|casein kinase 1, alpha 1	AK211333|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr12_+_79962662_79962770	0.122337	EOMES.p2	AK003094|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha
mm9_v1_chr7_+_115133880_115133880	0.120973	EOMES.p2	NM_146926|Olfr477|258928|olfactory receptor 477
mm9_v1_chr1_-_75250520_75250549	0.120911	EOMES.p2	BC064020|Ptprn|19275|protein tyrosine phosphatase, receptor type, N
mm9_v1_chr9_-_101154160_101154163	0.120908	EOMES.p2	NM_001161362|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr11_+_98603186_98603266	0.120252	EOMES.p2	AK078233|Thra|21833|thyroid hormone receptor alpha	NM_178060|Thra|21833|thyroid hormone receptor alpha	BC046795|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr2_-_129525512_129525673	0.119906	EOMES.p2	BC137571|Pdyn|18610|prodynorphin	BC137572|Pdyn|18610|prodynorphin	AF026537|Pdyn|18610|prodynorphin	AK133597|Pdyn|18610|prodynorphin
mm9_v1_chr19_-_46107484_46107619	0.118177	EOMES.p2	AK210031|Ldb1|16825|LIM domain binding 1
mm9_v1_chr10_-_127999933_127999966	0.117755	EOMES.p2	AK205907|Pa2g4|18813|proliferation-associated 2G4	AK207779|Pa2g4|18813|proliferation-associated 2G4
mm9_v1_chr19_-_32177613_32177629	0.117539	EOMES.p2	BC137898|Asah2|54447|N-acylsphingosine amidohydrolase 2	BC145016|Asah2|54447|N-acylsphingosine amidohydrolase 2	AB037181|Asah2|54447|N-acylsphingosine amidohydrolase 2	NM_018830|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr7_-_52622323_52622350	0.116395	EOMES.p2	
mm9_v1_chr1_-_162281701_162281701	0.115905	EOMES.p2	AK147634|Rabgap1l|29809|RAB GTPase activating protein 1-like	NM_001038621|Rabgap1l|29809|RAB GTPase activating protein 1-like
mm9_v1_chr10_-_14264800_14264841	0.115878	EOMES.p2	AB183545|Gpr126|215798|G protein-coupled receptor 126	NM_001002268|Gpr126|215798|G protein-coupled receptor 126
mm9_v1_chrX_-_148777014_148777028	0.115426	EOMES.p2	NM_029836|Tspyl2|52808|TSPY-like 2
mm9_v1_chr4_-_128483355_128483429	0.115288	EOMES.p2	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr4_-_129118034_129118085	0.114993	EOMES.p2	BC023839|Zbtb8b|215627|zinc finger and BTB domain containing 8b	AK140914|Zbtb8b|215627|zinc finger and BTB domain containing 8b	AK163930|Zbtb8b|215627|zinc finger and BTB domain containing 8b	NM_153541|Zbtb8b|215627|zinc finger and BTB domain containing 8b
mm9_v1_chr17_-_56556337_56556420	0.114445	EOMES.p2	S59186|Ptprs|19280|protein tyrosine phosphatase, receptor type, S
mm9_v1_chrX_-_98615096_98615252	0.113921	EOMES.p2	BC042699|Zmym3|56364|zinc finger, MYM-type 3	BC050131|Zmym3|56364|zinc finger, MYM-type 3	AK033470|Zmym3|56364|zinc finger, MYM-type 3	BC108366|Zmym3|56364|zinc finger, MYM-type 3	NM_001177985|Zmym3|56364|zinc finger, MYM-type 3	NM_001177986|Zmym3|56364|zinc finger, MYM-type 3
mm9_v1_chr7_+_148656076_148656334	0.113592	EOMES.p2	AK179527|Cd151|12476|CD151 antigen	AK210628|Cd151|12476|CD151 antigen
mm9_v1_chr4_-_118966945_118967127	0.113526	EOMES.p2	X57621|Ybx1|22608|Y box protein 1	M62867|Ybx1|22608|Y box protein 1	U33196|Ybx1|22608|Y box protein 1	BC029747|Ybx1|22608|Y box protein 1	BC013620|Ybx1|22608|Y box protein 1	M60419|Ybx1|22608|Y box protein 1	BC061634|Ybx1|22608|Y box protein 1	BC031472|Ybx1|22608|Y box protein 1	BC049977|Ybx1|22608|Y box protein 1	BC013450|Ybx1|22608|Y box protein 1	AK011890|Ybx1|22608|Y box protein 1	AK150821|Ybx1|22608|Y box protein 1	NM_011732|Ybx1|22608|Y box protein 1
mm9_v1_chr17_-_57163687_57163784	0.113433	EOMES.p2	BC064454|Khsrp|16549|KH-type splicing regulatory protein
mm9_v1_chr5_-_100392845_100392900	0.110593	EOMES.p2	AK053251|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr11_-_117830554_117830679	0.109982	EOMES.p2	NM_007707|Socs3|12702|suppressor of cytokine signaling 3
mm9_v1_chr8_+_13167807_13167913	0.109275	EOMES.p2	AK206801|Lamp1|16783|lysosomal-associated membrane protein 1	AK184936|Lamp1|16783|lysosomal-associated membrane protein 1	AK181514|Lamp1|16783|lysosomal-associated membrane protein 1	AK183713|Lamp1|16783|lysosomal-associated membrane protein 1	AK186339|Lamp1|16783|lysosomal-associated membrane protein 1	AK187329|Lamp1|16783|lysosomal-associated membrane protein 1	AK200388|Lamp1|16783|lysosomal-associated membrane protein 1	AK205762|Lamp1|16783|lysosomal-associated membrane protein 1	AK208462|Lamp1|16783|lysosomal-associated membrane protein 1	AK210006|Lamp1|16783|lysosomal-associated membrane protein 1	AK215533|Lamp1|16783|lysosomal-associated membrane protein 1
mm9_v1_chr17_-_29374656_29374735	0.108567	EOMES.p2	AK147529|Cpne5|240058|copine V	AK044042|Cpne5|240058|copine V	NM_153166|Cpne5|240058|copine V	BC036971|Cpne5|240058|copine V
mm9_v1_chr10_+_118891074_118891089	0.108065	EOMES.p2	BC072632|Grip1|74053|glutamate receptor interacting protein 1
mm9_v1_chr11_-_74710562_74710581	0.107312	EOMES.p2	BC058414|Sgsm2|97761|small G protein signaling modulator 2	BC060163|Sgsm2|97761|small G protein signaling modulator 2	NM_197943|Sgsm2|97761|small G protein signaling modulator 2
mm9_v1_chr4_-_40883509_40883654	0.107154	EOMES.p2	AK184952|Bag1|12017|BCL2-associated athanogene 1	AK213721|Bag1|12017|BCL2-associated athanogene 1	AK216811|Bag1|12017|BCL2-associated athanogene 1
mm9_v1_chr2_+_33097791_33097802	0.107012	EOMES.p2	AK187902|Angptl2|26360|angiopoietin-like 2	AK205240|Angptl2|26360|angiopoietin-like 2	AK214337|Angptl2|26360|angiopoietin-like 2
mm9_v1_chr18_+_35931332_35931453	0.106799	EOMES.p2	AK172088|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	AK148089|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	AK162093|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2
mm9_v1_chr2_-_25079684_25079784	0.106517	EOMES.p2	AK006924|Tubb2c|227613|tubulin, beta 2C
mm9_v1_chr3_-_94386449_94386477	0.106415	EOMES.p2	AK122296|Snx27|76742|sorting nexin family member 27	BC053495|Snx27|76742|sorting nexin family member 27
mm9_v1_chr4_+_115894518_115894602	0.105716	EOMES.p2	BC053102|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	NM_181585|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	AK031936|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm9_v1_chr9_+_67607229_67607244	0.105463	EOMES.p2	NM_001081314|C2cd4b|75697|C2 calcium-dependent domain containing 4B	BC039571|C2cd4b|75697|C2 calcium-dependent domain containing 4B
mm9_v1_chr3_-_108229641_108229684	0.10532	EOMES.p2	
mm9_v1_chr4_+_15211137_15211173	0.102378	EOMES.p2	AK162736|Tmem64|100201|transmembrane protein 64
mm9_v1_chr4_+_138011061_138011100	0.101687	EOMES.p2	NM_025451|Camk2n1|66259|calcium/calmodulin-dependent protein kinase II inhibitor 1	AY523601|Camk2n1|66259|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm9_v1_chr13_+_54472806_54472829	0.101685	EOMES.p2	BC058395|Cplx2|12890|complexin 2
mm9_v1_chr10_+_72119562_72119594	0.100164	EOMES.p2	AK170637|Zwint|52696|ZW10 interactor
mm9_v1_chr11_-_106163120_106163178	0.100006	EOMES.p2	AK019956|Gh|14599|growth hormone	AK019952|Gh|14599|growth hormone	AK019954|Gh|14599|growth hormone	AK019959|Gh|14599|growth hormone	AK019961|Gh|14599|growth hormone	AK030715|Gh|14599|growth hormone	BC061157|Gh|14599|growth hormone	NM_008117|Gh|14599|growth hormone	X02891|Gh|14599|growth hormone	AK030419|Gh|14599|growth hormone
mm9_v1_chr17_-_45704908_45704999	0.0989455	EOMES.p2	
mm9_v1_chr7_-_54263783_54263783	0.098844	EOMES.p2	NM_175318|Spty2d1|101685|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm9_v1_chr13_+_105019053_105019067	0.0980638	EOMES.p2	AK160776|Cenpk|60411|centromere protein K	BC092351|Cenpk|60411|centromere protein K
mm9_v1_chr7_+_110486525_110486569	0.0980487	EOMES.p2	BC141003|Olfr599|258726|olfactory receptor 599	NM_146731|Olfr599|258726|olfactory receptor 599
mm9_v1_chr8_-_122071463_122071711	0.097535	EOMES.p2	AF094820|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	DQ913734|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK210818|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC054837|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr11_-_115209705_115209756	0.0972903	EOMES.p2	
mm9_v1_chrX_-_99700697_99700735	0.0971626	EOMES.p2	AK131998|Hdac8|70315|histone deacetylase 8
mm9_v1_chr15_+_100766701_100766755	0.0969167	EOMES.p2	NM_011323|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	U26707|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	AF049617|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha
mm9_v1_chr15_-_67008222_67008399	0.0967969	EOMES.p2	AK078469|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK143207|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	BC023130|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK169958|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK086286|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	BC099670|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK031344|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	BC099693|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK138747|St3gal1|20442|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm9_v1_chr4_-_150026205_150026286	0.0963194	EOMES.p2	AK134677|Slc45a1|242773|solute carrier family 45, member 1	BC051188|Slc45a1|242773|solute carrier family 45, member 1	AK134683|Slc45a1|242773|solute carrier family 45, member 1	AK158002|Slc45a1|242773|solute carrier family 45, member 1	AK082651|Slc45a1|242773|solute carrier family 45, member 1	NM_173774|Slc45a1|242773|solute carrier family 45, member 1
mm9_v1_chr9_+_108851568_108851592	0.0959581	EOMES.p2	
mm9_v1_chr1_+_37426061_37426065	0.0951433	EOMES.p2	AK035867|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	BC120541|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	BC144747|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	BC144748|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	NM_172971|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr19_+_55328128_55328228	0.0948426	EOMES.p2	AK150542|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK150663|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK145894|Acsl5|433256|acyl-CoA synthetase long-chain family member 5
mm9_v1_chr8_-_87366624_87366670	0.0945387	EOMES.p2	X56603|Calr|12317|calreticulin
mm9_v1_chr6_+_48597232_48597434	0.0945363	EOMES.p2	AK134199|Gimap8|243374|GTPase, IMAP family member 8	NM_001077410|Gimap8|243374|GTPase, IMAP family member 8	AB178029|Gimap8|243374|GTPase, IMAP family member 8	AK155985|Gimap8|243374|GTPase, IMAP family member 8	NM_212486|Gimap8|243374|GTPase, IMAP family member 8	BC137943|Gimap8|243374|GTPase, IMAP family member 8	BC137944|Gimap8|243374|GTPase, IMAP family member 8	AJ617674|Gimap8|243374|GTPase, IMAP family member 8
mm9_v1_chr12_+_113919213_113919483	0.0937262	EOMES.p2	BC069952|Zbtb42|382639|zinc finger and BTB domain containing 42	AK079245|Zbtb42|382639|zinc finger and BTB domain containing 42
mm9_v1_chr15_-_99079369_99079394	0.0933455	EOMES.p2	AK158611|Mcrs1|51812|microspherule protein 1
mm9_v1_chr2_-_103637795_103637829	0.0932777	EOMES.p2	NM_001111291|Caprin1|53872|cell cycle associated protein 1	NM_016739|Caprin1|53872|cell cycle associated protein 1
mm9_v1_chr11_+_119860559_119860573	0.0931811	EOMES.p2	
mm9_v1_chr10_+_87922331_87922408	0.0931554	EOMES.p2	BC132079|Sycp3|20962|synaptonemal complex protein 3	BC138509|Sycp3|20962|synaptonemal complex protein 3	NM_011517|Sycp3|20962|synaptonemal complex protein 3	Y08485|Sycp3|20962|synaptonemal complex protein 3	AK131949|Sycp3|20962|synaptonemal complex protein 3	BC048483|Sycp3|20962|synaptonemal complex protein 3	BC089540|Sycp3|20962|synaptonemal complex protein 3	BC099552|Sycp3|20962|synaptonemal complex protein 3
mm9_v1_chr2_+_121692687_121692705	0.0918943	EOMES.p2	BC064446|Casc4|319996|cancer susceptibility candidate 4	NM_177054|Casc4|319996|cancer susceptibility candidate 4	NM_199038|Casc4|319996|cancer susceptibility candidate 4
mm9_v1_chr17_+_37210011_37210126	0.0918218	EOMES.p2	AK013692|Gabbr1|54393|gamma-aminobutyric acid (GABA) B receptor, 1
mm9_v1_chr5_-_134652558_134652645	0.0915146	EOMES.p2	AK005040|Wbscr16|94254|Williams-Beuren syndrome chromosome region 16 homolog (human)	BC024714|Wbscr16|94254|Williams-Beuren syndrome chromosome region 16 homolog (human)	AF410456|Wbscr16|94254|Williams-Beuren syndrome chromosome region 16 homolog (human)	BC055335|Wbscr16|94254|Williams-Beuren syndrome chromosome region 16 homolog (human)	AK017733|Wbscr16|94254|Williams-Beuren syndrome chromosome region 16 homolog (human)	NM_033572|Wbscr16|94254|Williams-Beuren syndrome chromosome region 16 homolog (human)
mm9_v1_chr8_-_87368790_87368860	0.0909715	EOMES.p2	
mm9_v1_chr10_+_59757371_59757391	0.090312	EOMES.p2	
mm9_v1_chr3_-_127201974_127202032	0.0901856	EOMES.p2	AK044634|Ank2|109676|ankyrin 2, brain
mm9_v1_chr5_+_138187303_138187355	0.0891671	EOMES.p2	BC023761|Tsc22d4|78829|TSC22 domain family, member 4
mm9_v1_chr10_+_41170163_41170242	0.0889008	EOMES.p2	AK146986|Zbtb24|268294|zinc finger and BTB domain containing 24	AK154467|Zbtb24|268294|zinc finger and BTB domain containing 24	AY210402|Zbtb24|268294|zinc finger and BTB domain containing 24	BC050933|Zbtb24|268294|zinc finger and BTB domain containing 24	NM_153398|Zbtb24|268294|zinc finger and BTB domain containing 24	AK054097|Zbtb24|268294|zinc finger and BTB domain containing 24	AK169260|Zbtb24|268294|zinc finger and BTB domain containing 24	BC055367|Zbtb24|268294|zinc finger and BTB domain containing 24	AF263010|Zbtb24|268294|zinc finger and BTB domain containing 24
mm9_v1_chr5_+_43624701_43624701	0.0888956	EOMES.p2	NM_001177379|Cpeb2|231207|cytoplasmic polyadenylation element binding protein 2	NM_175937|Cpeb2|231207|cytoplasmic polyadenylation element binding protein 2
mm9_v1_chr1_+_136327630_136327750	0.0887431	EOMES.p2	
mm9_v1_chr7_+_116081258_116081309	0.0887088	EOMES.p2	AK217928|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK192917|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F
mm9_v1_chr8_+_91115856_91115922	0.0885479	EOMES.p2	AK192443|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	AK193874|Nkd1|93960|naked cuticle 1 homolog (Drosophila)
mm9_v1_chrX_+_20002809_20002842	0.0885479	EOMES.p2	BC065070|Phf16|382207|PHD finger protein 16
mm9_v1_chr16_-_36784864_36785047	0.0882617	EOMES.p2	BC018335|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AK128939|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AK018393|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC138627|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC138628|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC051199|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AF111811|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	NM_001145899|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	NM_021301|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2
mm9_v1_chr17_+_71901400_71901422	0.0878592	EOMES.p2	AK077138|Spdya|70891|speedy homolog A (Xenopus laevis)	NM_001142631|Spdya|70891|speedy homolog A (Xenopus laevis)	NM_029254|Spdya|70891|speedy homolog A (Xenopus laevis)	AK014910|Spdya|70891|speedy homolog A (Xenopus laevis)	BC147706|Spdya|70891|speedy homolog A (Xenopus laevis)	BC147719|Spdya|70891|speedy homolog A (Xenopus laevis)
mm9_v1_chr11_-_118254729_118254841	0.0877258	EOMES.p2	AK200165|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein
mm9_v1_chr18_-_62901040_62901040	0.0876735	EOMES.p2	AK139149|Spink13|100038417|serine peptidase inhibitor, Kazal type 13	NM_001168423|Spink13|100038417|serine peptidase inhibitor, Kazal type 13
mm9_v1_chr5_-_122921160_122921263	0.0873658	EOMES.p2	AK210291|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr9_+_71063591_71063595	0.0868307	EOMES.p2	NM_009022|Aldh1a2|19378|aldehyde dehydrogenase family 1, subfamily A2
mm9_v1_chr13_+_105019043_105019047	0.0860038	EOMES.p2	AK033117|Cenpk|60411|centromere protein K
mm9_v1_chr6_+_88775664_88775919	0.0857189	EOMES.p2	AK195256|Mgll|23945|monoglyceride lipase	AK199521|Mgll|23945|monoglyceride lipase	AK213425|Mgll|23945|monoglyceride lipase	AK185298|Mgll|23945|monoglyceride lipase	AK186020|Mgll|23945|monoglyceride lipase	AK190741|Mgll|23945|monoglyceride lipase	AK191234|Mgll|23945|monoglyceride lipase	AK191381|Mgll|23945|monoglyceride lipase	AK193146|Mgll|23945|monoglyceride lipase	AK194428|Mgll|23945|monoglyceride lipase	AK195163|Mgll|23945|monoglyceride lipase	AK195208|Mgll|23945|monoglyceride lipase	AK197913|Mgll|23945|monoglyceride lipase	AK198715|Mgll|23945|monoglyceride lipase	AK199057|Mgll|23945|monoglyceride lipase	AK200299|Mgll|23945|monoglyceride lipase	AK202265|Mgll|23945|monoglyceride lipase	AK202325|Mgll|23945|monoglyceride lipase	AK208993|Mgll|23945|monoglyceride lipase	AK214675|Mgll|23945|monoglyceride lipase	AK136867|Mgll|23945|monoglyceride lipase
mm9_v1_chr10_+_21698470_21698479	0.0852994	EOMES.p2	NM_001161847|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr7_-_134351860_134352145	0.0847224	EOMES.p2	AK047320|Tbc1d10b|68449|TBC1 domain family, member 10b	AK047327|Tbc1d10b|68449|TBC1 domain family, member 10b	NM_144522|Tbc1d10b|68449|TBC1 domain family, member 10b
mm9_v1_chr8_+_46035561_46035561	0.0842901	EOMES.p2	AJ250768|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)	NM_001081286|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)
mm9_v1_chr12_-_110098804_110098955	0.0842386	EOMES.p2	AK185973|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr6_-_90612275_90612375	0.0841098	EOMES.p2	AK044711|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr10_+_61155793_61155924	0.083674	EOMES.p2	
mm9_v1_chrX_-_71070284_71070317	0.083041	EOMES.p2	AK046101|Pdzd4|245469|PDZ domain containing 4	NM_001029868|Pdzd4|245469|PDZ domain containing 4
mm9_v1_chr15_-_83138533_83138567	0.0828014	EOMES.p2	
mm9_v1_chr11_-_78020896_78021039	0.0825442	EOMES.p2	AK207208|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)
mm9_v1_chr15_+_80085613_80085722	0.082511	EOMES.p2	AK003001|Atf4|11911|activating transcription factor 4	NM_009716|Atf4|11911|activating transcription factor 4	BC085169|Atf4|11911|activating transcription factor 4
mm9_v1_chr15_-_95358306_95358472	0.082358	EOMES.p2	BC051968|Nell2|54003|NEL-like 2 (chicken)
mm9_v1_chr11_-_22185840_22185840	0.0822471	EOMES.p2	AF424697|Ehbp1|216565|EH domain binding protein 1	NM_153078|Ehbp1|216565|EH domain binding protein 1
mm9_v1_chr6_+_58781846_58781891	0.0819073	EOMES.p2	AK017531|Herc3|73998|hect domain and RLD 3
mm9_v1_chr2_+_34631438_34631582	0.0810436	EOMES.p2	AK218616|Hspa5|14828|heat shock protein 5	AK186478|Hspa5|14828|heat shock protein 5	AK192310|Hspa5|14828|heat shock protein 5
mm9_v1_chr6_-_124867872_124867954	0.0801746	EOMES.p2	BC052699|Ptms|69202|parathymosin
mm9_v1_chr6_+_115189004_115189072	0.0799804	EOMES.p2	AK029181|Syn2|20965|synapsin II
mm9_v1_chr9_+_81757308_81757350	0.079409	EOMES.p2	BC096613|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK082395|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK166209|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK043929|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	NM_175213|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)
mm9_v1_chr5_+_138229004_138229102	0.0789481	EOMES.p2	AK080079|Zcwpw1|381678|zinc finger, CW type with PWWP domain 1	NM_001005426|Zcwpw1|381678|zinc finger, CW type with PWWP domain 1	BC071186|Zcwpw1|381678|zinc finger, CW type with PWWP domain 1
mm9_v1_chr2_-_131000485_131000584	0.0786249	EOMES.p2	BC006046|Spef1|70997|sperm flagellar 1	AK047675|Spef1|70997|sperm flagellar 1	NM_027641|Spef1|70997|sperm flagellar 1	AY860964|Spef1|70997|sperm flagellar 1	AK016476|Spef1|70997|sperm flagellar 1
mm9_v1_chr2_-_29980091_29980130	0.0784947	EOMES.p2	AK032153|Zer1|227693|zer-1 homolog (C. elegans)	AK029290|Zer1|227693|zer-1 homolog (C. elegans)
mm9_v1_chr3_-_153388047_153388152	0.0783756	EOMES.p2	BC131987|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC132317|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC058387|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK034804|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_011372|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	Y11342|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm9_v1_chr1_-_55044032_55044295	0.0776755	EOMES.p2	AK077993|Sf3b1|81898|splicing factor 3b, subunit 1	AK087700|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr1_+_94830952_94831032	0.0776523	EOMES.p2	AF089089|Capn10|23830|calpain 10	NM_011796|Capn10|23830|calpain 10
mm9_v1_chr9_+_72859850_72859978	0.0770845	EOMES.p2	BC006717|Ccpg1|72278|cell cycle progression 1
mm9_v1_chr9_+_40590943_40591093	0.0768292	EOMES.p2	AK033766|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr1_+_187251960_187252031	0.0763126	EOMES.p2	AK166460|Eprs|107508|glutamyl-prolyl-tRNA synthetase
mm9_v1_chrX_-_159267249_159267385	0.0760573	EOMES.p2	AK162263|Txlng|353170|taxilin gamma	BC080778|Txlng|353170|taxilin gamma	AK161561|Txlng|353170|taxilin gamma	AK031783|Txlng|353170|taxilin gamma	BC059099|Txlng|353170|taxilin gamma	BC117898|Txlng|353170|taxilin gamma	BC117899|Txlng|353170|taxilin gamma	AK030100|Txlng|353170|taxilin gamma	NM_178935|Txlng|353170|taxilin gamma	AK078477|Txlng|353170|taxilin gamma	AK044130|Txlng|353170|taxilin gamma	DQ316984|Txlng|353170|taxilin gamma	DQ320011|Txlng|353170|taxilin gamma
mm9_v1_chr3_-_88893885_88893966	0.0760126	EOMES.p2	AK170210|Rusc1|72296|RUN and SH3 domain containing 1	NM_001083808|Rusc1|72296|RUN and SH3 domain containing 1	AK170012|Rusc1|72296|RUN and SH3 domain containing 1
mm9_v1_chr2_-_180976728_180976769	0.0758459	EOMES.p2	AK157942|BC006779|229003|cDNA sequence BC006779	AK168622|BC006779|229003|cDNA sequence BC006779	NM_183162|BC006779|229003|cDNA sequence BC006779
mm9_v1_chr2_+_25359044_25359186	0.075381	EOMES.p2	AK176950|Fbxw5|30839|F-box and WD-40 domain protein 5	AK187599|Fbxw5|30839|F-box and WD-40 domain protein 5
mm9_v1_chr19_+_7457020_7457026	0.07509	EOMES.p2	AK018939|1700105P06Rik|654802|RIKEN cDNA 1700105P06 gene
mm9_v1_chr3_+_89586320_89586446	0.0741667	EOMES.p2	AK211403|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr15_-_90764873_90764944	0.073962	EOMES.p2	AK052821|Kif21a|16564|kinesin family member 21A	AK047208|Kif21a|16564|kinesin family member 21A
mm9_v1_chr6_+_108163155_108163235	0.073612	EOMES.p2	AK042240|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1
mm9_v1_chr8_+_10153910_10154187	0.0733171	EOMES.p2	BC072580|Myo16|244281|myosin XVI	NM_001081397|Myo16|244281|myosin XVI	BC151049|Myo16|244281|myosin XVI	BC151051|Myo16|244281|myosin XVI	BC157966|Myo16|244281|myosin XVI	BC172122|Myo16|244281|myosin XVI	BC082311|Myo16|244281|myosin XVI	AK082350|Myo16|244281|myosin XVI
mm9_v1_chr16_-_22439642_22439745	0.0729717	EOMES.p2	BC034680|Etv5|104156|ets variant gene 5	NM_023794|Etv5|104156|ets variant gene 5	AK031452|Etv5|104156|ets variant gene 5	AK168881|Etv5|104156|ets variant gene 5	AK049234|Etv5|104156|ets variant gene 5	AK164091|Etv5|104156|ets variant gene 5	AK018368|Etv5|104156|ets variant gene 5
mm9_v1_chr5_-_144266956_144266980	0.0729506	EOMES.p2	
mm9_v1_chr13_+_33175971_33176037	0.0726114	EOMES.p2	NM_173052|Serpinb1b|282663|serine (or cysteine) peptidase inhibitor, clade B, member 1b	AK018226|Serpinb1b|282663|serine (or cysteine) peptidase inhibitor, clade B, member 1b	BC030354|Serpinb1b|282663|serine (or cysteine) peptidase inhibitor, clade B, member 1b
mm9_v1_chr7_-_52068757_52068869	0.0725127	EOMES.p2	AK160085|Atf5|107503|activating transcription factor 5	AY024362|Atf5|107503|activating transcription factor 5
mm9_v1_chr17_+_46633703_46633755	0.0721138	EOMES.p2	BC082791|BC048355|381101|cDNA sequence BC048355	AK146723|BC048355|381101|cDNA sequence BC048355	NM_207161|BC048355|381101|cDNA sequence BC048355	BC048355|BC048355|381101|cDNA sequence BC048355	AK151589|BC048355|381101|cDNA sequence BC048355
mm9_v1_chr11_-_68770359_68770398	0.0720836	EOMES.p2	BC089365|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15	NM_177566|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15
mm9_v1_chr13_-_74480876_74480941	0.0719388	EOMES.p2	AF095938|Sdha|66945|succinate dehydrogenase complex, subunit A, flavoprotein (Fp)	DQ402975|Sdha|66945|succinate dehydrogenase complex, subunit A, flavoprotein (Fp)	AK216171|Sdha|66945|succinate dehydrogenase complex, subunit A, flavoprotein (Fp)	AK209906|Sdha|66945|succinate dehydrogenase complex, subunit A, flavoprotein (Fp)	AK215982|Sdha|66945|succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
mm9_v1_chr4_-_71861939_71861956	0.0711699	EOMES.p2	NM_011599|Tle1|21885|transducin-like enhancer of split 1, homolog of Drosophila E(spl)
mm9_v1_chr17_-_36035368_36035398	0.0710007	EOMES.p2	AK177921|Atat1|73242|alpha tubulin acetyltransferase 1
mm9_v1_chr18_+_76401531_76401583	0.0708754	EOMES.p2	BC021342|Smad2|17126|MAD homolog 2 (Drosophila)	AK007817|Smad2|17126|MAD homolog 2 (Drosophila)	NM_010754|Smad2|17126|MAD homolog 2 (Drosophila)
mm9_v1_chr1_+_87804443_87804463	0.0708682	EOMES.p2	AK190372|Itm2c|64294|integral membrane protein 2C
mm9_v1_chr5_-_123183537_123183571	0.0706329	EOMES.p2	AK213252|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr7_-_77511607_77511666	0.0699885	EOMES.p2	BC094360|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_183261|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr12_-_5091185_5091230	0.0696282	EOMES.p2	AK039195|Klhl29|208439|kelch-like 29 (Drosophila)
mm9_v1_chr19_+_6298813_6298952	0.0695846	EOMES.p2	AK192505|Ehd1|13660|EH-domain containing 1	AK196160|Ehd1|13660|EH-domain containing 1	AK218303|Ehd1|13660|EH-domain containing 1	AK186304|Ehd1|13660|EH-domain containing 1	AK209033|Ehd1|13660|EH-domain containing 1
mm9_v1_chr1_-_166371638_166371729	0.0695805	EOMES.p2	AK162938|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chr4_+_5726856_5726857	0.0694719	EOMES.p2	AK049898|Fam110b|242297|family with sequence similarity 110, member B
mm9_v1_chr7_+_116094153_116094278	0.069186	EOMES.p2	AK158865|BC049265|414075|cDNA sequence BC049265	BC030475|BC049265|414075|cDNA sequence BC049265	BC049265|BC049265|414075|cDNA sequence BC049265
mm9_v1_chr17_-_80689434_80689517	0.0689874	EOMES.p2	BC079618|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC066091|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC065169|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	AK042947|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr3_+_137004089_137004128	0.0684947	EOMES.p2	AB034693|Emcn|59308|endomucin	AF060883|Emcn|59308|endomucin	AK164422|Emcn|59308|endomucin
mm9_v1_chr8_+_32239179_32239274	0.0683185	EOMES.p2	AK004356|Rnf122|68867|ring finger protein 122
mm9_v1_chr13_+_94077988_94077988	0.068318	EOMES.p2	AY137385|Homer1|26556|homer homolog 1 (Drosophila)	NM_152134|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr10_+_127848671_127848731	0.0682389	EOMES.p2	AK045760|Rnf41|67588|ring finger protein 41	NM_001164237|Rnf41|67588|ring finger protein 41	NM_026259|Rnf41|67588|ring finger protein 41	AK030558|Rnf41|67588|ring finger protein 41	BC049078|Rnf41|67588|ring finger protein 41	AF305730|Rnf41|67588|ring finger protein 41
mm9_v1_chr5_-_33590505_33590587	0.068124	EOMES.p2	
mm9_v1_chr19_+_4097344_4097450	0.0679124	EOMES.p2	AK012121|Cdk2ap2|52004|CDK2-associated protein 2	AK018035|Cdk2ap2|52004|CDK2-associated protein 2	NM_026373|Cdk2ap2|52004|CDK2-associated protein 2	AK003686|Cdk2ap2|52004|CDK2-associated protein 2
mm9_v1_chr8_+_124474475_124474479	0.0676862	EOMES.p2	AK170884|Banp|53325|BTG3 associated nuclear protein	AF091234|Banp|53325|BTG3 associated nuclear protein	AF235503|Banp|53325|BTG3 associated nuclear protein
mm9_v1_chr10_+_98725858_98725868	0.0675457	EOMES.p2	AK088665|Dusp6|67603|dual specificity phosphatase 6	AK005062|Dusp6|67603|dual specificity phosphatase 6	AK088468|Dusp6|67603|dual specificity phosphatase 6	AK148192|Dusp6|67603|dual specificity phosphatase 6	AK159502|Dusp6|67603|dual specificity phosphatase 6	NM_026268|Dusp6|67603|dual specificity phosphatase 6	AK151126|Dusp6|67603|dual specificity phosphatase 6	AK152773|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr17_-_29484848_29484909	0.0674933	EOMES.p2	AF176007|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)	AF192558|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)	NM_019880|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)
mm9_v1_chr13_+_6576663_6576738	0.06745	EOMES.p2	AK009313|Pitrm1|69617|pitrilysin metallepetidase 1
mm9_v1_chr11_-_120668581_120668636	0.0673962	EOMES.p2	AK078721|Fasn|14104|fatty acid synthase
mm9_v1_chr6_-_21802087_21802170	0.0673824	EOMES.p2	BC065152|Tspan12|269831|tetraspanin 12	AK033554|Tspan12|269831|tetraspanin 12	BC068240|Tspan12|269831|tetraspanin 12
mm9_v1_chr17_-_56765925_56766071	0.067004	EOMES.p2	AK190637|Lonp1|74142|lon peptidase 1, mitochondrial
mm9_v1_chr5_-_120935430_120935472	0.0668845	EOMES.p2	AK179951|Plbd2|71772|phospholipase B domain containing 2	AK214336|Plbd2|71772|phospholipase B domain containing 2	AK215411|Plbd2|71772|phospholipase B domain containing 2	AK216450|Plbd2|71772|phospholipase B domain containing 2	AK218751|Plbd2|71772|phospholipase B domain containing 2	AK219038|Plbd2|71772|phospholipase B domain containing 2
mm9_v1_chr11_+_102295463_102295502	0.0666984	EOMES.p2	AK193719|Grn|14824|granulin	AK219696|Grn|14824|granulin	AK211032|Grn|14824|granulin
mm9_v1_chr11_-_51670897_51671154	0.0664822	EOMES.p2	AK147453|Phf15|76901|PHD finger protein 15	AK129097|Phf15|76901|PHD finger protein 15	NM_199299|Phf15|76901|PHD finger protein 15	AK004823|Phf15|76901|PHD finger protein 15
mm9_v1_chr16_+_43640198_43640217	0.0664748	EOMES.p2	AK080813|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr11_-_55125758_55125758	0.0662577	EOMES.p2	NM_001029988|Fat2|245827|FAT tumor suppressor homolog 2 (Drosophila)
mm9_v1_chr4_+_109349189_109349242	0.0661549	EOMES.p2	BC065098|Faf1|14084|Fas-associated factor 1	NM_007983|Faf1|14084|Fas-associated factor 1
mm9_v1_chr17_-_35291759_35291763	0.0661399	EOMES.p2	BC034134|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr16_+_5884885_5884885	0.0659372	EOMES.p2	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr5_+_137960107_137960139	0.0659208	EOMES.p2	AY176042|Gigyf1|57330|GRB10 interacting GYF protein 1	NM_031408|Gigyf1|57330|GRB10 interacting GYF protein 1	BC052875|Gigyf1|57330|GRB10 interacting GYF protein 1
mm9_v1_chr11_-_119966955_119966991	0.0654543	EOMES.p2	AK194453|Slc38a10|72055|solute carrier family 38, member 10	BC023375|Slc38a10|72055|solute carrier family 38, member 10
mm9_v1_chr4_+_115410677_115410677	0.0654099	EOMES.p2	BC059213|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene	NM_172698|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene
mm9_v1_chr16_+_5086296_5086328	0.0651674	EOMES.p2	
mm9_v1_chr17_-_45798447_45798582	0.065144	EOMES.p2	AK208427|Tmem63b|224807|transmembrane protein 63b	AK217033|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr10_+_98453513_98453709	0.0647055	EOMES.p2	AK053569|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK042547|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr10_-_88067758_88067896	0.0646509	EOMES.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr15_+_54402914_54402981	0.0639892	EOMES.p2	NM_178920|Mal2|105853|mal, T-cell differentiation protein 2
mm9_v1_chr7_-_52381569_52381578	0.0636521	EOMES.p2	BC034450|Rpl13a|22121|ribosomal protein L13A	BC042392|Rpl13a|22121|ribosomal protein L13A
mm9_v1_chr14_+_68334154_68334168	0.0635798	EOMES.p2	AK158922|Kctd9|105440|potassium channel tetramerisation domain containing 9	NM_001111028|Kctd9|105440|potassium channel tetramerisation domain containing 9	NM_134073|Kctd9|105440|potassium channel tetramerisation domain containing 9
mm9_v1_chr1_+_101669228_101669341	0.063461	EOMES.p2	NM_172851|Cntnap5b|241175|contactin associated protein-like 5B
mm9_v1_chr7_-_116759904_116760005	0.0634206	EOMES.p2	AK158270|St5|76954|suppression of tumorigenicity 5	AK011990|St5|76954|suppression of tumorigenicity 5
mm9_v1_chr5_+_137791368_137791732	0.0633321	EOMES.p2	AK143422|Ephb4|13846|Eph receptor B4	BC016505|Ephb4|13846|Eph receptor B4	AK046884|Ephb4|13846|Eph receptor B4	BC090839|Ephb4|13846|Eph receptor B4	U06834|Ephb4|13846|Eph receptor B4	BC013342|Ephb4|13846|Eph receptor B4
mm9_v1_chr4_+_144483110_144483188	0.0631907	EOMES.p2	AK087137|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr19_-_7557553_7557640	0.0619915	EOMES.p2	AY507126|Rtn3|20168|reticulon 3	AK146505|Rtn3|20168|reticulon 3
mm9_v1_chr10_+_61155390_61155586	0.0618687	EOMES.p2	AK003538|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr15_+_54402988_54403054	0.0616938	EOMES.p2	AK035986|Mal2|105853|mal, T-cell differentiation protein 2	BC113154|Mal2|105853|mal, T-cell differentiation protein 2
mm9_v1_chr7_+_127741138_127741298	0.0607083	EOMES.p2	AK021400|E130201H02Rik|78552|Y box protein 1 pseudogene	BC094539|E130201H02Rik|78552|Y box protein 1 pseudogene
mm9_v1_chr5_-_136384495_136384514	0.060557	EOMES.p2	
mm9_v1_chr7_-_149762919_149762977	0.0601918	EOMES.p2	BC025150|H19|14955|H19 fetal liver mRNA
mm9_v1_chr9_-_21822333_21822348	0.059725	EOMES.p2	AK078068|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm9_v1_chr9_+_44307218_44307218	0.059512	EOMES.p2	AY296058|Bcl9l|80288|B-cell CLL/lymphoma 9-like	NM_030256|Bcl9l|80288|B-cell CLL/lymphoma 9-like
mm9_v1_chr11_-_47192793_47192803	0.0594214	EOMES.p2	BC130019|Sgcd|24052|sarcoglycan, delta (dystrophin-associated glycoprotein)	AK040974|Sgcd|24052|sarcoglycan, delta (dystrophin-associated glycoprotein)	NM_011891|Sgcd|24052|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm9_v1_chr3_-_51323311_51323452	0.0592683	EOMES.p2	AK164869|Setd7|73251|SET domain containing (lysine methyltransferase) 7
mm9_v1_chr2_+_34631709_34631818	0.0590795	EOMES.p2	AK208906|Hspa5|14828|heat shock protein 5
mm9_v1_chr3_-_142456600_142456910	0.0590387	EOMES.p2	AK140746|Pkn2|109333|protein kinase N2	AK084887|Pkn2|109333|protein kinase N2	AK082921|Pkn2|109333|protein kinase N2
mm9_v1_chr13_-_101603189_101603199	0.0588878	EOMES.p2	AK166006|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5
mm9_v1_chr10_+_73284612_73284690	0.0588363	EOMES.p2	NM_001142735|Pcdh15|11994|protocadherin 15	NM_001142736|Pcdh15|11994|protocadherin 15	NM_001142737|Pcdh15|11994|protocadherin 15	NM_001142738|Pcdh15|11994|protocadherin 15	NM_001142739|Pcdh15|11994|protocadherin 15	NM_001142740|Pcdh15|11994|protocadherin 15	NM_001142741|Pcdh15|11994|protocadherin 15	NM_001142742|Pcdh15|11994|protocadherin 15	NM_001142743|Pcdh15|11994|protocadherin 15	NM_001142746|Pcdh15|11994|protocadherin 15	NM_001142747|Pcdh15|11994|protocadherin 15	NM_001142748|Pcdh15|11994|protocadherin 15	NM_001142760|Pcdh15|11994|protocadherin 15	NM_023115|Pcdh15|11994|protocadherin 15	AF281899|Pcdh15|11994|protocadherin 15	AY949849|Pcdh15|11994|protocadherin 15	DQ354396|Pcdh15|11994|protocadherin 15	DQ354397|Pcdh15|11994|protocadherin 15	DQ354398|Pcdh15|11994|protocadherin 15	DQ354399|Pcdh15|11994|protocadherin 15	DQ354400|Pcdh15|11994|protocadherin 15	DQ354401|Pcdh15|11994|protocadherin 15	DQ354402|Pcdh15|11994|protocadherin 15	DQ354403|Pcdh15|11994|protocadherin 15	DQ354404|Pcdh15|11994|protocadherin 15	DQ354405|Pcdh15|11994|protocadherin 15	DQ354406|Pcdh15|11994|protocadherin 15	DQ354407|Pcdh15|11994|protocadherin 15	DQ354408|Pcdh15|11994|protocadherin 15	DQ354409|Pcdh15|11994|protocadherin 15	DQ354410|Pcdh15|11994|protocadherin 15	DQ354411|Pcdh15|11994|protocadherin 15	DQ354412|Pcdh15|11994|protocadherin 15	DQ354413|Pcdh15|11994|protocadherin 15	DQ354414|Pcdh15|11994|protocadherin 15	DQ354415|Pcdh15|11994|protocadherin 15	AK139154|Pcdh15|11994|protocadherin 15	DQ354416|Pcdh15|11994|protocadherin 15	DQ354417|Pcdh15|11994|protocadherin 15	DQ354418|Pcdh15|11994|protocadherin 15
mm9_v1_chr6_+_116214215_116214252	0.0586749	EOMES.p2	AK089032|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)	NM_001081317|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)
mm9_v1_chrX_+_70587906_70588053	0.0585669	EOMES.p2	NM_031494|Zfp275|27081|zinc finger protein 275	AK142957|Zfp275|27081|zinc finger protein 275	NM_001160229|Zfp275|27081|zinc finger protein 275	BC138002|Zfp275|27081|zinc finger protein 275	BC138003|Zfp275|27081|zinc finger protein 275
mm9_v1_chr13_-_29045399_29045574	0.0584512	EOMES.p2	AK187111|Sox4|20677|SRY-box containing gene 4	BC060669|Sox4|20677|SRY-box containing gene 4	X70298|Sox4|20677|SRY-box containing gene 4	BC052736|Sox4|20677|SRY-box containing gene 4	NM_009238|Sox4|20677|SRY-box containing gene 4	AK053840|Sox4|20677|SRY-box containing gene 4	AK028989|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr8_+_125927389_125927433	0.05819	EOMES.p2	
mm9_v1_chr18_+_65352751_65352821	0.0581421	EOMES.p2	AK213593|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like	AK215536|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr11_-_86358252_86358308	0.0572888	EOMES.p2	BC038491|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	BC071244|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	AK032724|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	AK085687|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	AK135716|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	AK163258|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	NM_001114334|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1	NM_028259|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1
mm9_v1_chr16_+_18071099_18071220	0.056926	EOMES.p2	AK187760|Dgcr6|13353|DiGeorge syndrome critical region gene 6	AK219346|Dgcr6|13353|DiGeorge syndrome critical region gene 6	AK219449|Dgcr6|13353|DiGeorge syndrome critical region gene 6
mm9_v1_chr4_-_140221801_140221819	0.05579	EOMES.p2	AK028648|Arhgef10l|72754|Rho guanine nucleotide exchange factor (GEF) 10-like	NM_001112722|Arhgef10l|72754|Rho guanine nucleotide exchange factor (GEF) 10-like
mm9_v1_chr8_-_118230828_118230997	0.0556779	EOMES.p2	AK151738|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	AK152074|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr2_+_34627836_34627893	0.0556487	EOMES.p2	AJ002387|Hspa5|14828|heat shock protein 5	AK197258|Hspa5|14828|heat shock protein 5	AK215673|Hspa5|14828|heat shock protein 5
mm9_v1_chr2_+_30812810_30812845	0.0555382	EOMES.p2	AK011416|Tor1b|30934|torsin family 1, member B
mm9_v1_chr10_+_80645192_80645203	0.0551071	EOMES.p2	
mm9_v1_chr3_-_51129908_51129958	0.0550222	EOMES.p2	AF256216|Elf2|69257|E74-like factor 2	AF256217|Elf2|69257|E74-like factor 2	NM_023502|Elf2|69257|E74-like factor 2	BC092057|Elf2|69257|E74-like factor 2
mm9_v1_chr2_+_32087125_32087136	0.0544059	EOMES.p2	AK161103|Prrc2b|227723|proline-rich coiled-coil 2B
mm9_v1_chr18_+_74433418_74433450	0.0542837	EOMES.p2	AK166042|Mbd1|17190|methyl-CpG binding domain protein 1	AK193128|Mbd1|17190|methyl-CpG binding domain protein 1
mm9_v1_chr16_-_38341927_38341945	0.0542501	EOMES.p2	AK077038|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene	NM_001081025|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene
mm9_v1_chr6_-_92164804_92164868	0.054212	EOMES.p2	BC049106|Zfyve20|78287|zinc finger, FYVE domain containing 20	NM_030081|Zfyve20|78287|zinc finger, FYVE domain containing 20	AK019909|Zfyve20|78287|zinc finger, FYVE domain containing 20	BC017622|Zfyve20|78287|zinc finger, FYVE domain containing 20
mm9_v1_chr2_-_91802081_91802083	0.0541494	EOMES.p2	
mm9_v1_chr11_+_68884268_68884388	0.0541451	EOMES.p2	NM_025838|Tmem107|66910|transmembrane protein 107	NM_028336|Tmem107|66910|transmembrane protein 107	AK012938|Tmem107|66910|transmembrane protein 107	AK154279|Tmem107|66910|transmembrane protein 107	AK003403|Tmem107|66910|transmembrane protein 107	AK002804|Tmem107|66910|transmembrane protein 107	BC096686|Tmem107|66910|transmembrane protein 107	BC137584|Tmem107|66910|transmembrane protein 107	BC120499|Tmem107|66910|transmembrane protein 107
mm9_v1_chr6_-_139989932_139989951	0.0540063	EOMES.p2	BC106767|Plcz1|114875|phospholipase C, zeta 1	BC106768|Plcz1|114875|phospholipase C, zeta 1	AF435950|Plcz1|114875|phospholipase C, zeta 1	NM_054066|Plcz1|114875|phospholipase C, zeta 1	AK005949|Plcz1|114875|phospholipase C, zeta 1	AK006672|Plcz1|114875|phospholipase C, zeta 1
mm9_v1_chr3_-_81949667_81949798	0.0537994	EOMES.p2	BC057327|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK031305|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK028558|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK004815|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AF297082|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	NM_021896|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3
mm9_v1_chr1_-_164867355_164867355	0.0534834	EOMES.p2	NM_001178038|Fmo6|226565|flavin containing monooxygenase 6
mm9_v1_chr5_+_43625194_43625217	0.0533256	EOMES.p2	AK042065|Cpeb2|231207|cytoplasmic polyadenylation element binding protein 2	AB100307|Cpeb2|231207|cytoplasmic polyadenylation element binding protein 2	BC107349|Cpeb2|231207|cytoplasmic polyadenylation element binding protein 2	BC107350|Cpeb2|231207|cytoplasmic polyadenylation element binding protein 2
mm9_v1_chr8_-_118231677_118231736	0.0527458	EOMES.p2	S74567|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	AK019255|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr4_-_133574655_133574730	0.0526918	EOMES.p2	AB221669|Lin28a|83557|lin-28 homolog A (C. elegans)	BC068304|Lin28a|83557|lin-28 homolog A (C. elegans)	AF521097|Lin28a|83557|lin-28 homolog A (C. elegans)	NM_145833|Lin28a|83557|lin-28 homolog A (C. elegans)
mm9_v1_chr16_-_24090166_24090201	0.052688	EOMES.p2	
mm9_v1_chr6_+_83745021_83745052	0.05264	EOMES.p2	AK007240|Nagk|56174|N-acetylglucosamine kinase	AK084646|Nagk|56174|N-acetylglucosamine kinase	AJ242909|Nagk|56174|N-acetylglucosamine kinase	NM_019542|Nagk|56174|N-acetylglucosamine kinase	AK089238|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chr10_+_117641997_117642023	0.0525904	EOMES.p2	AJ249491|Il22|50929|interleukin 22	BC104348|Il22|50929|interleukin 22	BC104349|Il22|50929|interleukin 22	NM_016971|Il22|50929|interleukin 22	BC116235|Il22|50929|interleukin 22
mm9_v1_chr1_+_182656137_182656231	0.0522128	EOMES.p2	AF022770|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	AK030371|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	NM_133225|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	AK167272|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	AK168799|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	BC050121|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	BC060602|Acbd3|170760|acyl-Coenzyme A binding domain containing 3
mm9_v1_chr2_+_34627729_34627749	0.0518988	EOMES.p2	AK151244|Hspa5|14828|heat shock protein 5	D78645|Hspa5|14828|heat shock protein 5
mm9_v1_chr18_+_35721811_35721848	0.0518493	EOMES.p2	NM_010771|Matr3|17184|matrin 3
mm9_v1_chr7_+_98239427_98239516	0.0517675	EOMES.p2	AF388675|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr6_+_87863251_87863301	0.051694	EOMES.p2	AK207472|Copg|54161|coatomer protein complex, subunit gamma
mm9_v1_chr15_+_97942484_97942592	0.051383	EOMES.p2	D21868|Pfkm|18642|phosphofructokinase, muscle	NM_021514|Pfkm|18642|phosphofructokinase, muscle	BC005526|Pfkm|18642|phosphofructokinase, muscle	AF249894|Pfkm|18642|phosphofructokinase, muscle	D21865|Pfkm|18642|phosphofructokinase, muscle
mm9_v1_chr11_+_75275123_75275158	0.0513103	EOMES.p2	AK018628|2210403K04Rik|100042498|RIKEN cDNA 2210403K04 gene	AK008813|2210403K04Rik|100042498|RIKEN cDNA 2210403K04 gene
mm9_v1_chr18_-_34911152_34911201	0.0504038	EOMES.p2	U15562|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	L16926|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK168287|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK141737|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	NM_009860|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AF347115|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)
mm9_v1_chr5_+_116010796_116010949	0.0503025	EOMES.p2	BC030189|Rplp0|11837|ribosomal protein, large, P0	AK193996|Rplp0|11837|ribosomal protein, large, P0	AK205179|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr2_-_34817068_34817291	0.0501338	EOMES.p2	AK169515|Traf1|22029|TNF receptor-associated factor 1	AK089281|Traf1|22029|TNF receptor-associated factor 1	L35302|Traf1|22029|TNF receptor-associated factor 1	AK142931|Traf1|22029|TNF receptor-associated factor 1	AK029135|Traf1|22029|TNF receptor-associated factor 1	NM_009421|Traf1|22029|TNF receptor-associated factor 1
mm9_v1_chr17_-_56144975_56145021	0.0500276	EOMES.p2	BC026642|Stap2|106766|signal transducing adaptor family member 2	NM_145934|Stap2|106766|signal transducing adaptor family member 2	AK050172|Stap2|106766|signal transducing adaptor family member 2	AK050131|Stap2|106766|signal transducing adaptor family member 2
mm9_v1_chrX_+_7341083_7341085	0.0497431	EOMES.p2	AK151447|Tcfe3|209446|transcription factor E3	AK152221|Tcfe3|209446|transcription factor E3
mm9_v1_chr5_+_147762106_147762155	0.0495705	EOMES.p2	BC032292|Gtf3a|66596|general transcription factor III A
mm9_v1_chr8_-_72435604_72435609	0.0492585	EOMES.p2	AK183827|Gatad2a|234366|GATA zinc finger domain containing 2A	AK201858|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr3_-_105735506_105735581	0.049192	EOMES.p2	BC147821|I830077J02Rik|433638|RIKEN cDNA I830077J02 gene	BC147828|I830077J02Rik|433638|RIKEN cDNA I830077J02 gene	AK152510|I830077J02Rik|433638|RIKEN cDNA I830077J02 gene	NM_001033780|I830077J02Rik|433638|RIKEN cDNA I830077J02 gene
mm9_v1_chr9_-_62644026_62644272	0.049097	EOMES.p2	AK078303|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK160393|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr6_-_72738935_72738949	0.0490427	EOMES.p2	BC128305|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)	BC128306|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)	AJ223069|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)	NM_001079822|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)	NM_009332|Tcf7l1|21415|transcription factor 7-like 1 (T-cell specific, HMG box)
mm9_v1_chr7_-_51807815_51807956	0.048508	EOMES.p2	
mm9_v1_chr10_-_77734341_77734501	0.0482969	EOMES.p2	
mm9_v1_chr9_+_74800828_74800859	0.0480061	EOMES.p2	BC060215|BC031353|235493|cDNA sequence BC031353	NM_001113283|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr9_-_61761227_61761271	0.047966	EOMES.p2	AK203941|Rplp1|56040|ribosomal protein, large, P1
mm9_v1_chr19_+_36629128_36629172	0.0478241	EOMES.p2	AK142777|Hectd2|226098|HECT domain containing 2	NM_001163471|Hectd2|226098|HECT domain containing 2	NM_172637|Hectd2|226098|HECT domain containing 2	BC137671|Hectd2|226098|HECT domain containing 2	BC144815|Hectd2|226098|HECT domain containing 2	AK041629|Hectd2|226098|HECT domain containing 2	AK043646|Hectd2|226098|HECT domain containing 2	AK079321|Hectd2|226098|HECT domain containing 2
mm9_v1_chr16_+_37884098_37884244	0.0473544	EOMES.p2	AK052834|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr10_+_76731607_76731785	0.0473348	EOMES.p2	AK218752|Pofut2|80294|protein O-fucosyltransferase 2	AK206420|Pofut2|80294|protein O-fucosyltransferase 2
mm9_v1_chr15_-_82074765_82074852	0.047118	EOMES.p2	NM_001080158|Cenpm|66570|centromere protein M
mm9_v1_chr15_+_99288299_99288391	0.0469439	EOMES.p2	
mm9_v1_chr5_+_31014229_31014273	0.0469043	EOMES.p2	AK044866|Dpysl5|65254|dihydropyrimidinase-like 5	BC065054|Dpysl5|65254|dihydropyrimidinase-like 5	NM_023047|Dpysl5|65254|dihydropyrimidinase-like 5	BC103789|Dpysl5|65254|dihydropyrimidinase-like 5
mm9_v1_chr7_+_6238181_6238231	0.0468315	EOMES.p2	AY850275|Zfp667|384763|zinc finger protein 667	BC049673|Zfp667|384763|zinc finger protein 667	NM_001024928|Zfp667|384763|zinc finger protein 667	AK080616|Zfp667|384763|zinc finger protein 667	BC141152|Zfp667|384763|zinc finger protein 667	BC141153|Zfp667|384763|zinc finger protein 667	AK164056|Zfp667|384763|zinc finger protein 667
mm9_v1_chr17_+_56301899_56301970	0.0466456	EOMES.p2	AK090348|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	NM_025566|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK150678|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK153177|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK011245|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK136962|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1
mm9_v1_chrX_-_92640149_92640178	0.046472	EOMES.p2	BC053442|Fam123b|72345|family with sequence similarity 123, member B	AK012651|Fam123b|72345|family with sequence similarity 123, member B	AK049774|Fam123b|72345|family with sequence similarity 123, member B	NM_175179|Fam123b|72345|family with sequence similarity 123, member B
mm9_v1_chr9_-_114549261_114549332	0.0463811	EOMES.p2	BC036179|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC039183|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK171701|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK161842|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr11_+_81849074_81849163	0.0456892	EOMES.p2	AK150937|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153468|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153520|Ccl2|20296|chemokine (C-C motif) ligand 2	NM_011333|Ccl2|20296|chemokine (C-C motif) ligand 2	AK132590|Ccl2|20296|chemokine (C-C motif) ligand 2	AK151789|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153443|Ccl2|20296|chemokine (C-C motif) ligand 2	BC055070|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145867|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145869|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065929|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065930|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065931|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065932|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065933|Ccl2|20296|chemokine (C-C motif) ligand 2	CT010187|Ccl2|20296|chemokine (C-C motif) ligand 2
mm9_v1_chr7_-_88851798_88851810	0.0455566	EOMES.p2	AK163423|Homer2|26557|homer homolog 2 (Drosophila)	NM_001164086|Homer2|26557|homer homolog 2 (Drosophila)	NM_011983|Homer2|26557|homer homolog 2 (Drosophila)
mm9_v1_chr16_-_19983049_19983121	0.0454707	EOMES.p2	AY350736|Klhl6|239743|kelch-like 6 (Drosophila)	BC100568|Klhl6|239743|kelch-like 6 (Drosophila)	NM_183390|Klhl6|239743|kelch-like 6 (Drosophila)
mm9_v1_chr14_-_56262087_56262223	0.0453265	EOMES.p2	AF269152|Tm9sf1|74140|transmembrane 9 superfamily member 1	BC017617|Tm9sf1|74140|transmembrane 9 superfamily member 1	AK160610|Tm9sf1|74140|transmembrane 9 superfamily member 1
mm9_v1_chr7_+_108526635_108526703	0.0452429	EOMES.p2	NM_001040112|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	AK150132|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm9_v1_chr10_-_41905549_41905563	0.0452258	EOMES.p2	AK041595|Foxo3|56484|forkhead box O3	AK159465|Foxo3|56484|forkhead box O3
mm9_v1_chr3_-_144347983_144348061	0.0450943	EOMES.p2	
mm9_v1_chr8_-_114378162_114378252	0.0449593	EOMES.p2	AK160532|Cfdp1|23837|craniofacial development protein 1	BC005589|Cfdp1|23837|craniofacial development protein 1	AB010828|Cfdp1|23837|craniofacial development protein 1	NM_011801|Cfdp1|23837|craniofacial development protein 1	Y08219|Cfdp1|23837|craniofacial development protein 1	AK133989|Cfdp1|23837|craniofacial development protein 1
mm9_v1_chr11_+_93905501_93905545	0.0446739	EOMES.p2	AK014060|Spag9|70834|sperm associated antigen 9	AK079365|Spag9|70834|sperm associated antigen 9	NM_001025428|Spag9|70834|sperm associated antigen 9	NM_001025429|Spag9|70834|sperm associated antigen 9	NM_001025430|Spag9|70834|sperm associated antigen 9	AK172961|Spag9|70834|sperm associated antigen 9
mm9_v1_chr3_-_10208575_10208582	0.0446437	EOMES.p2	AK003143|Fabp4|11770|fatty acid binding protein 4, adipocyte	AK088535|Fabp4|11770|fatty acid binding protein 4, adipocyte	NM_024406|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr8_+_46970814_46970842	0.0443178	EOMES.p2	AF002283|Pdlim3|53318|PDZ and LIM domain 3	NM_016798|Pdlim3|53318|PDZ and LIM domain 3	AK078421|Pdlim3|53318|PDZ and LIM domain 3	AK141331|Pdlim3|53318|PDZ and LIM domain 3	AK164054|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr9_+_69843263_69843284	0.0442455	EOMES.p2	AF400107|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AY591757|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AY591758|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	NM_001008238|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr1_+_75165201_75165358	0.0440243	EOMES.p2	NM_001159905|Zfand2b|68818|zinc finger, AN1 type domain 2B	NM_001159906|Zfand2b|68818|zinc finger, AN1 type domain 2B	BC011495|Zfand2b|68818|zinc finger, AN1 type domain 2B	AK151430|Zfand2b|68818|zinc finger, AN1 type domain 2B	NM_026846|Zfand2b|68818|zinc finger, AN1 type domain 2B	AK004332|Zfand2b|68818|zinc finger, AN1 type domain 2B
mm9_v1_chr6_+_7505070_7505199	0.0438156	EOMES.p2	D17584|Tac1|21333|tachykinin 1	NM_009311|Tac1|21333|tachykinin 1	BC117081|Tac1|21333|tachykinin 1	BC119122|Tac1|21333|tachykinin 1	BC144737|Tac1|21333|tachykinin 1
mm9_v1_chr10_+_59809734_59809769	0.0437197	EOMES.p2	EF426799|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene
mm9_v1_chr6_+_39523866_39523933	0.0434719	EOMES.p2	AK028557|Adck2|57869|aarF domain containing kinase 2	AK161225|Adck2|57869|aarF domain containing kinase 2	AK028568|Adck2|57869|aarF domain containing kinase 2	NM_178873|Adck2|57869|aarF domain containing kinase 2
mm9_v1_chr16_+_17759703_17759801	0.0434679	EOMES.p2	NM_145479|Klhl22|224023|kelch-like 22 (Drosophila)	AK086748|Klhl22|224023|kelch-like 22 (Drosophila)	AK012046|Klhl22|224023|kelch-like 22 (Drosophila)	AK028197|Klhl22|224023|kelch-like 22 (Drosophila)	AK030669|Klhl22|224023|kelch-like 22 (Drosophila)	AK143514|Klhl22|224023|kelch-like 22 (Drosophila)
mm9_v1_chr6_-_52114644_52114829	0.043388	EOMES.p2	AB221621|Hoxa2|15399|homeobox A2	M93292|Hoxa2|15399|homeobox A2	BC117105|Hoxa2|15399|homeobox A2	BC117107|Hoxa2|15399|homeobox A2	BC027688|Hoxa2|15399|homeobox A2	M95599|Hoxa2|15399|homeobox A2	NM_010451|Hoxa2|15399|homeobox A2
mm9_v1_chr10_-_20880559_20880789	0.0430008	EOMES.p2	X02774|Myb|17863|myeloblastosis oncogene	AK132250|Myb|17863|myeloblastosis oncogene	AK137965|Myb|17863|myeloblastosis oncogene	BC011513|Myb|17863|myeloblastosis oncogene	AK088079|Myb|17863|myeloblastosis oncogene	AK088598|Myb|17863|myeloblastosis oncogene	M12848|Myb|17863|myeloblastosis oncogene	NM_001198914|Myb|17863|myeloblastosis oncogene	NM_010848|Myb|17863|myeloblastosis oncogene
mm9_v1_chr5_-_31350374_31350626	0.0428526	EOMES.p2	AK161633|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	NM_177870|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	AK088682|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm9_v1_chr2_+_32092104_32092162	0.0425295	EOMES.p2	AK153984|Pomt1|99011|protein-O-mannosyltransferase 1	AK050680|Pomt1|99011|protein-O-mannosyltransferase 1	AY494857|Pomt1|99011|protein-O-mannosyltransferase 1	AK134770|Pomt1|99011|protein-O-mannosyltransferase 1	AY007238|Pomt1|99011|protein-O-mannosyltransferase 1
mm9_v1_chr7_-_133636378_133636456	0.0421699	EOMES.p2	AK219263|Atxn2l|233871|ataxin 2-like
mm9_v1_chr15_-_10644312_10644406	0.042044	EOMES.p2	AK045733|Rai14|75646|retinoic acid induced 14	AK129333|Rai14|75646|retinoic acid induced 14	AK090343|Rai14|75646|retinoic acid induced 14	NM_001166408|Rai14|75646|retinoic acid induced 14
mm9_v1_chr2_+_118687703_118687761	0.0420267	EOMES.p2	AK005024|Ivd|56357|isovaleryl coenzyme A dehydrogenase	AK020127|Ivd|56357|isovaleryl coenzyme A dehydrogenase	AK077416|Ivd|56357|isovaleryl coenzyme A dehydrogenase	BC027198|Ivd|56357|isovaleryl coenzyme A dehydrogenase	NM_019826|Ivd|56357|isovaleryl coenzyme A dehydrogenase	BC018325|Ivd|56357|isovaleryl coenzyme A dehydrogenase	AK017660|Ivd|56357|isovaleryl coenzyme A dehydrogenase	AF225989|Ivd|56357|isovaleryl coenzyme A dehydrogenase
mm9_v1_chr2_-_76820599_76820607	0.0419815	EOMES.p2	AK084718|Ttn|22138|titin	AK052859|Ttn|22138|titin	AK084709|Ttn|22138|titin	AK085811|Ttn|22138|titin	AK085832|Ttn|22138|titin	NM_011652|Ttn|22138|titin	NM_028004|Ttn|22138|titin
mm9_v1_chr12_-_70260041_70260125	0.0419143	EOMES.p2	BC051203|Rps29|20090|ribosomal protein S29	L31609|Rps29|20090|ribosomal protein S29	AK012285|Rps29|20090|ribosomal protein S29	AK002939|Rps29|20090|ribosomal protein S29	BC055750|Rps29|20090|ribosomal protein S29
mm9_v1_chr10_-_80664743_80664795	0.0415762	EOMES.p2	BC119244|Itgb1bp3|69564|integrin beta 1 binding protein 3	BC119246|Itgb1bp3|69564|integrin beta 1 binding protein 3	AK137483|Itgb1bp3|69564|integrin beta 1 binding protein 3	NM_027120|Itgb1bp3|69564|integrin beta 1 binding protein 3	AK009352|Itgb1bp3|69564|integrin beta 1 binding protein 3
mm9_v1_chr15_+_91991704_91991862	0.0414576	EOMES.p2	NM_001159647|Cntn1|12805|contactin 1	BC066864|Cntn1|12805|contactin 1
mm9_v1_chrX_+_7215705_7215836	0.0405963	EOMES.p2	NM_009305|Syp|20977|synaptophysin	AK034291|Syp|20977|synaptophysin	AK043756|Syp|20977|synaptophysin	AK090259|Syp|20977|synaptophysin	BC052354|Syp|20977|synaptophysin	BC014823|Syp|20977|synaptophysin	X95818|Syp|20977|synaptophysin
mm9_v1_chr5_-_23857421_23857489	0.0403477	EOMES.p2	AF012868|Kcnh2|16511|potassium voltage-gated channel, subfamily H (eag-related), member 2	NM_013569|Kcnh2|16511|potassium voltage-gated channel, subfamily H (eag-related), member 2
mm9_v1_chr2_+_167340686_167340879	0.0401146	EOMES.p2	BC019989|Rnf114|81018|ring finger protein 114	AK216194|Rnf114|81018|ring finger protein 114	AK003584|Rnf114|81018|ring finger protein 114
mm9_v1_chr11_-_30119771_30119771	0.0400596	EOMES.p2	NM_175836|Spnb2|20742|spectrin beta 2
mm9_v1_chr14_-_65671577_65671651	0.0399468	EOMES.p2	BC038525|Extl3|54616|exostoses (multiple)-like 3
mm9_v1_chr9_+_35018704_35018857	0.039782	EOMES.p2	AK007516|Srpr|67398|signal recognition particle receptor ('docking protein')	AK004967|Srpr|67398|signal recognition particle receptor ('docking protein')	NM_026130|Srpr|67398|signal recognition particle receptor ('docking protein')	AK038017|Srpr|67398|signal recognition particle receptor ('docking protein')	BC021839|Srpr|67398|signal recognition particle receptor ('docking protein')
mm9_v1_chr11_-_116485513_116485568	0.0395568	EOMES.p2	BC052182|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK154639|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK042365|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK171085|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	NM_001167680|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AY167043|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)
mm9_v1_chr9_+_51894884_51895031	0.0394517	EOMES.p2	AK216134|Rdx|19684|radixin
mm9_v1_chr4_-_132895228_132895231	0.0390345	EOMES.p2	AK172431|Wdtc1|230796|WD and tetratricopeptide repeats 1	NM_199306|Wdtc1|230796|WD and tetratricopeptide repeats 1
mm9_v1_chr11_-_23795075_23795194	0.0390222	EOMES.p2	DQ103505|Papolg|216578|poly(A) polymerase gamma
mm9_v1_chr13_-_38128805_38129027	0.0388067	EOMES.p2	AK016953|Cage1|71213|cancer antigen 1	NM_027724|Cage1|71213|cancer antigen 1	BC082568|Cage1|71213|cancer antigen 1	AK089301|Cage1|71213|cancer antigen 1
mm9_v1_chr1_+_75479559_75479687	0.0385515	EOMES.p2	BC042776|Tmem198|319998|transmembrane protein 198	BC046546|Tmem198|319998|transmembrane protein 198
mm9_v1_chr2_+_34729897_34729955	0.0385383	EOMES.p2	AK033810|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	AK085616|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	NM_030021|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr6_-_124867732_124867749	0.038279	EOMES.p2	
mm9_v1_chr11_-_69495447_69495585	0.0382038	EOMES.p2	NM_030702|Senp3|80886|SUMO/sentrin specific peptidase 3	AK088608|Senp3|80886|SUMO/sentrin specific peptidase 3	NM_001163571|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chr4_-_41066842_41066902	0.0379629	EOMES.p2	AK203163|Nol6|230082|nucleolar protein family 6 (RNA-associated)
mm9_v1_chr10_+_128346900_128347000	0.0379214	EOMES.p2	NM_007653|Cd63|12512|CD63 antigen	AK150647|Cd63|12512|CD63 antigen	AK170344|Cd63|12512|CD63 antigen	AK146618|Cd63|12512|CD63 antigen	AK151702|Cd63|12512|CD63 antigen	AK152372|Cd63|12512|CD63 antigen	AK159875|Cd63|12512|CD63 antigen	AK163785|Cd63|12512|CD63 antigen	AK166543|Cd63|12512|CD63 antigen	AK152072|Cd63|12512|CD63 antigen	AK166766|Cd63|12512|CD63 antigen	BC008108|Cd63|12512|CD63 antigen	BC012212|Cd63|12512|CD63 antigen	D16432|Cd63|12512|CD63 antigen	AK028220|Cd63|12512|CD63 antigen	AK151963|Cd63|12512|CD63 antigen	AF159427|Cd63|12512|CD63 antigen
mm9_v1_chr7_-_35098548_35098580	0.0378275	EOMES.p2	AK134699|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr15_-_57702643_57702752	0.0377942	EOMES.p2	AK200586|Derl1|67819|Der1-like domain family, member 1	AK216985|Derl1|67819|Der1-like domain family, member 1	AK220009|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr11_+_105837881_105837909	0.0374925	EOMES.p2	AK164780|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chr4_+_126846429_126846514	0.0372265	EOMES.p2	BC057615|Dlgap3|242667|discs, large (Drosophila) homolog-associated protein 3	NM_198618|Dlgap3|242667|discs, large (Drosophila) homolog-associated protein 3
mm9_v1_chr19_-_54018725_54018744	0.0372095	EOMES.p2	AK016185|Bbip1|66360|BBSome interacting protein 1
mm9_v1_chr7_+_148514044_148514084	0.0371125	EOMES.p2	AK148367|Tmem80|71448|transmembrane protein 80	AK169083|Tmem80|71448|transmembrane protein 80	BC096570|Tmem80|71448|transmembrane protein 80	BC022756|Tmem80|71448|transmembrane protein 80
mm9_v1_chr4_-_35792385_35792444	0.0370087	EOMES.p2	BC137866|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC144985|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC145692|Lingo2|242384|leucine rich repeat and Ig domain containing 2	AK045639|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_001166001|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_175516|Lingo2|242384|leucine rich repeat and Ig domain containing 2
mm9_v1_chr3_-_8964045_8964059	0.037007	EOMES.p2	AY048852|Tpd52|21985|tumor protein D52	NM_001025261|Tpd52|21985|tumor protein D52	NM_001025262|Tpd52|21985|tumor protein D52
mm9_v1_chr4_+_55093796_55093934	0.0365583	EOMES.p2	AK035041|Zfp462|242466|zinc finger protein 462
mm9_v1_chr8_-_73982014_73982139	0.0362964	EOMES.p2	AK185006|Abhd8|64296|abhydrolase domain containing 8	AK178673|Abhd8|64296|abhydrolase domain containing 8	AK179035|Abhd8|64296|abhydrolase domain containing 8	AK184390|Abhd8|64296|abhydrolase domain containing 8	AK187254|Abhd8|64296|abhydrolase domain containing 8	AK207815|Abhd8|64296|abhydrolase domain containing 8	AK209444|Abhd8|64296|abhydrolase domain containing 8	AK181691|Abhd8|64296|abhydrolase domain containing 8	AK185637|Abhd8|64296|abhydrolase domain containing 8	AK189463|Abhd8|64296|abhydrolase domain containing 8	AK181236|Abhd8|64296|abhydrolase domain containing 8
mm9_v1_chr17_+_34727032_34727160	0.0358324	EOMES.p2	AK155863|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	BC021942|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)
mm9_v1_chrX_+_7496899_7497045	0.0351708	EOMES.p2	AF181560|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013892|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AF293356|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK076137|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK002969|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	BC012263|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor
mm9_v1_chr17_-_28502087_28502126	0.0346012	EOMES.p2	NM_021478|Tulp1|22157|tubby like protein 1	BC014820|Tulp1|22157|tubby like protein 1	BC029222|Tulp1|22157|tubby like protein 1
mm9_v1_chrX_+_93291474_93291563	0.0344995	EOMES.p2	
mm9_v1_chr17_+_56110138_56110224	0.0343206	EOMES.p2	BC052026|Shd|20420|src homology 2 domain-containing transforming protein D	BC079574|Shd|20420|src homology 2 domain-containing transforming protein D
mm9_v1_chr5_+_124566251_124566301	0.0342442	EOMES.p2	AK133934|Arl6ip4|65105|ADP-ribosylation factor-like 6 interacting protein 4
mm9_v1_chr7_-_52622167_52622179	0.034242	EOMES.p2	AB516303|Ppfia3|76787|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
mm9_v1_chr8_+_46970860_46970893	0.0340891	EOMES.p2	AK016447|Pdlim3|53318|PDZ and LIM domain 3	BC070418|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr2_+_28368603_28368686	0.0340582	EOMES.p2	NM_001145834|Ralgds|19730|ral guanine nucleotide dissociation stimulator	NM_009058|Ralgds|19730|ral guanine nucleotide dissociation stimulator
mm9_v1_chr6_-_99216494_99216530	0.0339943	EOMES.p2	BC064764|Foxp1|108655|forkhead box P1	AK171994|Foxp1|108655|forkhead box P1	BC065386|Foxp1|108655|forkhead box P1	NM_001197321|Foxp1|108655|forkhead box P1	AK040800|Foxp1|108655|forkhead box P1
mm9_v1_chr6_+_21899614_21899692	0.0339509	EOMES.p2	NM_023626|Ing3|71777|inhibitor of growth family, member 3	AY007791|Ing3|71777|inhibitor of growth family, member 3	AK080787|Ing3|71777|inhibitor of growth family, member 3	AK131993|Ing3|71777|inhibitor of growth family, member 3	BC018342|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr5_+_143178045_143178121	0.0336643	EOMES.p2	NM_146257|Slc29a4|243328|solute carrier family 29 (nucleoside transporters), member 4	BC025599|Slc29a4|243328|solute carrier family 29 (nucleoside transporters), member 4
mm9_v1_chr11_-_41996141_41996431	0.0334423	EOMES.p2	AK141596|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	AK034095|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	NM_010250|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr4_-_126645129_126645179	0.0333986	EOMES.p2	AK148366|Zmym4|67785|zinc finger, MYM-type 4	NM_001114399|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chrX_+_157600681_157600703	0.0333854	EOMES.p2	AK040521|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	AK031490|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	NM_133194|Scml2|107815|sex comb on midleg-like 2 (Drosophila)
mm9_v1_chr7_-_108971734_108971860	0.0333202	EOMES.p2	
mm9_v1_chr15_+_21041206_21041206	0.0332455	EOMES.p2	BC086655|Cdh12|215654|cadherin 12	NM_001008420|Cdh12|215654|cadherin 12
mm9_v1_chr5_+_30925568_30925589	0.0332155	EOMES.p2	AK084790|Kcnk3|16527|potassium channel, subfamily K, member 3
mm9_v1_chr17_+_3482314_3482460	0.0331705	EOMES.p2	AK158489|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chrX_-_20639111_20639168	0.0331351	EOMES.p2	AK155039|Zfp182|319535|zinc finger protein 182	BC063066|Zfp182|319535|zinc finger protein 182	AK045698|Zfp182|319535|zinc finger protein 182	NM_001013387|Zfp182|319535|zinc finger protein 182	NM_001111076|Zfp182|319535|zinc finger protein 182	AK043973|Zfp182|319535|zinc finger protein 182
mm9_v1_chr5_-_109027924_109027935	0.0330028	EOMES.p2	AK034637|Gak|231580|cyclin G associated kinase
mm9_v1_chr11_-_55209320_55209338	0.0328704	EOMES.p2	AK192259|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr13_+_105019025_105019034	0.0327465	EOMES.p2	AK082939|Cenpk|60411|centromere protein K	NM_181061|Cenpk|60411|centromere protein K
mm9_v1_chr18_-_15471207_15471211	0.0326544	EOMES.p2	AK088053|E430002N23Rik|319440|RIKEN cDNA E430002N23 gene
mm9_v1_chr7_-_135034440_135034483	0.0324869	EOMES.p2	AK220244|Prss53|330657|protease, serine, 53	BC147509|Prss53|330657|protease, serine, 53	BC151010|Prss53|330657|protease, serine, 53	BC151017|Prss53|330657|protease, serine, 53	BC172059|Prss53|330657|protease, serine, 53	NM_001081268|Prss53|330657|protease, serine, 53
mm9_v1_chr12_-_86611513_86611563	0.0323223	EOMES.p2	BC079861|Mlh3|217716|mutL homolog 3 (E coli)	NM_175337|Mlh3|217716|mutL homolog 3 (E coli)	BC072599|Mlh3|217716|mutL homolog 3 (E coli)	AK132195|Mlh3|217716|mutL homolog 3 (E coli)	AK035887|Mlh3|217716|mutL homolog 3 (E coli)
mm9_v1_chr7_+_94395160_94395355	0.032233	EOMES.p2	AK169304|Nox4|50490|NADPH oxidase 4	AK087097|Nox4|50490|NADPH oxidase 4	AF261944|Nox4|50490|NADPH oxidase 4	AF276957|Nox4|50490|NADPH oxidase 4	AK050371|Nox4|50490|NADPH oxidase 4	AK085509|Nox4|50490|NADPH oxidase 4	AK149398|Nox4|50490|NADPH oxidase 4	AK149455|Nox4|50490|NADPH oxidase 4	AK149492|Nox4|50490|NADPH oxidase 4	NM_015760|Nox4|50490|NADPH oxidase 4	AK052905|Nox4|50490|NADPH oxidase 4	AB041034|Nox4|50490|NADPH oxidase 4	AB042745|Nox4|50490|NADPH oxidase 4	AF218723|Nox4|50490|NADPH oxidase 4	BC138918|Nox4|50490|NADPH oxidase 4	BC145462|Nox4|50490|NADPH oxidase 4	BC021378|Nox4|50490|NADPH oxidase 4	EU861989|Nox4|50490|NADPH oxidase 4
mm9_v1_chr18_+_82644510_82644514	0.0319923	EOMES.p2	NM_001025245|Mbp|17196|myelin basic protein	NM_010777|Mbp|17196|myelin basic protein
mm9_v1_chr17_+_56301980_56301995	0.0317056	EOMES.p2	AK004949|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	BC032199|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1
mm9_v1_chr1_-_95646769_95646865	0.0315652	EOMES.p2	AK213476|Thap4|67026|THAP domain containing 4	BC013538|Thap4|67026|THAP domain containing 4	AK216112|Thap4|67026|THAP domain containing 4
mm9_v1_chr2_+_146681579_146681639	0.0314186	EOMES.p2	BC150844|Plk1s1|228730|polo-like kinase 1 substrate 1	BC150845|Plk1s1|228730|polo-like kinase 1 substrate 1	AK135486|Plk1s1|228730|polo-like kinase 1 substrate 1	NM_001033298|Plk1s1|228730|polo-like kinase 1 substrate 1
mm9_v1_chr7_+_148514018_148514031	0.0312108	EOMES.p2	AK017460|Tmem80|71448|transmembrane protein 80	AK134821|Tmem80|71448|transmembrane protein 80	NM_001141950|Tmem80|71448|transmembrane protein 80	NM_027797|Tmem80|71448|transmembrane protein 80
mm9_v1_chr12_+_111517438_111517469	0.031139	EOMES.p2	AK140797|Dio3|107585|deiodinase, iodothyronine type III	AK146060|Dio3|107585|deiodinase, iodothyronine type III	NM_172119|Dio3|107585|deiodinase, iodothyronine type III	BC106847|Dio3|107585|deiodinase, iodothyronine type III	BC106848|Dio3|107585|deiodinase, iodothyronine type III
mm9_v1_chrX_+_106029816_106029906	0.0311126	EOMES.p2	AK086455|2810403D21Rik|69964|RIKEN cDNA 2810403D21 gene
mm9_v1_chr2_+_49643205_49643207	0.0310111	EOMES.p2	NM_027990|Lypd6b|71897|LY6/PLAUR domain containing 6B	AK009282|Lypd6b|71897|LY6/PLAUR domain containing 6B
mm9_v1_chr9_-_121825407_121825416	0.0309932	EOMES.p2	BC049969|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	AF090317|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010973|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010974|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr7_-_52494453_52494466	0.0309362	EOMES.p2	AK154466|Cd37|12493|CD37 antigen
mm9_v1_chr9_+_32180002_32180181	0.0308666	EOMES.p2	NM_019659|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1	AK085262|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1	AF012834|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1
mm9_v1_chr11_-_86517662_86517713	0.0307834	EOMES.p2	AK167527|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr2_-_51828671_51828727	0.0307538	EOMES.p2	NM_001141948|Nmi|64685|N-myc (and STAT) interactor	NM_001141949|Nmi|64685|N-myc (and STAT) interactor	NM_019401|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr7_+_19669194_19669289	0.030738	EOMES.p2	NM_001190490|Dmpk|13400|dystrophia myotonica-protein kinase	NM_001190491|Dmpk|13400|dystrophia myotonica-protein kinase	NM_032418|Dmpk|13400|dystrophia myotonica-protein kinase	BC056615|Dmpk|13400|dystrophia myotonica-protein kinase	BC024150|Dmpk|13400|dystrophia myotonica-protein kinase	BC075715|Dmpk|13400|dystrophia myotonica-protein kinase
mm9_v1_chr7_+_130521491_130521589	0.030529	EOMES.p2	NM_025304|Lcmt1|30949|leucine carboxyl methyltransferase 1	AK003424|Lcmt1|30949|leucine carboxyl methyltransferase 1	BC132507|Lcmt1|30949|leucine carboxyl methyltransferase 1	BC132509|Lcmt1|30949|leucine carboxyl methyltransferase 1	BC145301|Lcmt1|30949|leucine carboxyl methyltransferase 1
mm9_v1_chr1_-_75178465_75178492	0.0305229	EOMES.p2	
mm9_v1_chr14_-_45839064_45839076	0.0303511	EOMES.p2	AK039945|Txndc16|70561|thioredoxin domain containing 16	AK046466|Txndc16|70561|thioredoxin domain containing 16	NM_172597|Txndc16|70561|thioredoxin domain containing 16	BC060101|Txndc16|70561|thioredoxin domain containing 16	AK164111|Txndc16|70561|thioredoxin domain containing 16
mm9_v1_chr3_-_89832276_89832298	0.0303377	EOMES.p2	AK082804|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr7_+_133991066_133991211	0.0300848	EOMES.p2	BC055768|Doc2a|13446|double C2, alpha	NM_010069|Doc2a|13446|double C2, alpha
mm9_v1_chr9_-_32151821_32151934	0.030066	EOMES.p2	AK052891|Kcnj5|16521|potassium inwardly-rectifying channel, subfamily J, member 5	AK164058|Kcnj5|16521|potassium inwardly-rectifying channel, subfamily J, member 5	NM_010605|Kcnj5|16521|potassium inwardly-rectifying channel, subfamily J, member 5	AK137600|Kcnj5|16521|potassium inwardly-rectifying channel, subfamily J, member 5
mm9_v1_chr17_+_28960526_28960643	0.0297903	EOMES.p2	AK162638|Brpf3|268936|bromodomain and PHD finger containing, 3
mm9_v1_chr15_-_43002356_43002397	0.0297448	EOMES.p2	AK087485|Rspo2|239405|R-spondin 2 homolog (Xenopus laevis)	NM_172815|Rspo2|239405|R-spondin 2 homolog (Xenopus laevis)	AK052457|Rspo2|239405|R-spondin 2 homolog (Xenopus laevis)	AK049891|Rspo2|239405|R-spondin 2 homolog (Xenopus laevis)
mm9_v1_chr14_-_66696533_66696571	0.0297186	EOMES.p2	AK161261|Adam2|11495|a disintegrin and metallopeptidase domain 2	AK161266|Adam2|11495|a disintegrin and metallopeptidase domain 2	U16242|Adam2|11495|a disintegrin and metallopeptidase domain 2	AK016550|Adam2|11495|a disintegrin and metallopeptidase domain 2	NM_009618|Adam2|11495|a disintegrin and metallopeptidase domain 2	U38806|Adam2|11495|a disintegrin and metallopeptidase domain 2
mm9_v1_chr1_+_95405907_95405920	0.0296638	EOMES.p2	
mm9_v1_chr3_+_96400524_96400617	0.0290811	EOMES.p2	NM_001024851|Ankrd34a|545554|ankyrin repeat domain 34A	BC052924|Ankrd34a|545554|ankyrin repeat domain 34A
mm9_v1_chr1_-_75176965_75176984	0.0289974	EOMES.p2	AK151165|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr13_+_59234737_59234835	0.0289583	EOMES.p2	AK021108|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr2_-_25174498_25174656	0.0288993	EOMES.p2	D10028|Grin1|14810|glutamate receptor, ionotropic, NMDA1 (zeta 1)	BC039157|Grin1|14810|glutamate receptor, ionotropic, NMDA1 (zeta 1)	AK158175|Grin1|14810|glutamate receptor, ionotropic, NMDA1 (zeta 1)	AK036204|Grin1|14810|glutamate receptor, ionotropic, NMDA1 (zeta 1)	AK158140|Grin1|14810|glutamate receptor, ionotropic, NMDA1 (zeta 1)
mm9_v1_chrX_+_20265093_20265121	0.0288769	EOMES.p2	AK166188|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr11_+_70470701_70470714	0.0288568	EOMES.p2	X70182|Eno3|13808|enolase 3, beta muscle	AK002485|Eno3|13808|enolase 3, beta muscle	NM_001136062|Eno3|13808|enolase 3, beta muscle	X57747|Eno3|13808|enolase 3, beta muscle
mm9_v1_chr19_-_32182638_32182709	0.0287821	EOMES.p2	AB037111|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK080951|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK041937|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK047692|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK046540|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK166100|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK034493|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr6_+_113102884_113103027	0.0286427	EOMES.p2	AK088328|Setd5|72895|SET domain containing 5
mm9_v1_chr9_+_51894422_51894502	0.0285034	EOMES.p2	
mm9_v1_chr10_+_87323855_87324094	0.0281139	EOMES.p2	NM_001111274|Igf1|16000|insulin-like growth factor 1	NM_001111276|Igf1|16000|insulin-like growth factor 1	NM_184052|Igf1|16000|insulin-like growth factor 1	X04480|Igf1|16000|insulin-like growth factor 1	X04482|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr12_+_86940285_86940466	0.0281013	EOMES.p2	AB077438|Jdp2|81703|Jun dimerization protein 2	NM_030887|Jdp2|81703|Jun dimerization protein 2
mm9_v1_chr19_-_6982516_6982562	0.0280344	EOMES.p2	AK209224|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr8_+_14095884_14096088	0.0280102	EOMES.p2	BC118969|Dlgap2|244310|discs, large (Drosophila) homolog-associated protein 2
mm9_v1_chr1_+_135260280_135260396	0.0279782	EOMES.p2	AK031665|Etnk2|214253|ethanolamine kinase 2	BC145351|Etnk2|214253|ethanolamine kinase 2
mm9_v1_chr7_+_17334480_17334612	0.0278156	EOMES.p2	AK208745|Ap2s1|232910|adaptor-related protein complex 2, sigma 1 subunit
mm9_v1_chr11_-_74739449_74739483	0.0278089	EOMES.p2	AK157122|Srr|27364|serine racemase
mm9_v1_chr14_-_31832274_31832280	0.0277188	EOMES.p2	NM_153547|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK167094|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)
mm9_v1_chrX_-_18038399_18038522	0.0275644	EOMES.p2	AK085770|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	BC118515|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	NM_175228|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	AK016298|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene	AK163928|4930578C19Rik|75905|RIKEN cDNA 4930578C19 gene
mm9_v1_chr11_+_98629709_98629729	0.0272302	EOMES.p2	
mm9_v1_chr10_-_31329530_31329530	0.0268317	EOMES.p2	NM_001146349|Rnf217|268291|ring finger protein 217
mm9_v1_chr12_-_55896488_55896574	0.0267582	EOMES.p2	BC025911|Snx6|72183|sorting nexin 6
mm9_v1_chr9_-_35018470_35018510	0.026701	EOMES.p2	AK163722|Foxred1|235169|FAD-dependent oxidoreductase domain containing 1	BC024806|Foxred1|235169|FAD-dependent oxidoreductase domain containing 1	NM_172291|Foxred1|235169|FAD-dependent oxidoreductase domain containing 1
mm9_v1_chr11_-_17847399_17847495	0.0264575	EOMES.p2	AK018594|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr12_+_66137328_66137352	0.0261288	EOMES.p2	AK168462|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)	BC034078|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm9_v1_chr12_+_73885063_73885417	0.0261276	EOMES.p2	AK178989|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform	AK181077|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform
mm9_v1_chr3_-_95695852_95695897	0.0259888	EOMES.p2	AF534879|BC028528|229600|cDNA sequence BC028528	NM_153513|BC028528|229600|cDNA sequence BC028528	BC028528|BC028528|229600|cDNA sequence BC028528
mm9_v1_chr3_+_94736974_94736989	0.0258938	EOMES.p2	AK002447|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr5_-_115750913_115750938	0.0258426	EOMES.p2	BC008106|Dynll1|56455|dynein light chain LC8-type 1	BC034258|Dynll1|56455|dynein light chain LC8-type 1	AF020185|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr16_-_88648032_88648040	0.0257568	EOMES.p2	BC128283|Krtap26-1|69533|keratin associated protein 26-1	BC139410|Krtap26-1|69533|keratin associated protein 26-1	BC139411|Krtap26-1|69533|keratin associated protein 26-1	AK009086|Krtap26-1|69533|keratin associated protein 26-1	NM_027105|Krtap26-1|69533|keratin associated protein 26-1
mm9_v1_chr3_-_30799013_30799120	0.0256699	EOMES.p2	AK050678|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr6_-_28399248_28399339	0.0251559	EOMES.p2	BC131908|Pax4|18506|paired box gene 4	BC131906|Pax4|18506|paired box gene 4	BC145168|Pax4|18506|paired box gene 4	BC145169|Pax4|18506|paired box gene 4	AB010557|Pax4|18506|paired box gene 4	AF145233|Pax4|18506|paired box gene 4	AB010558|Pax4|18506|paired box gene 4	AB008912|Pax4|18506|paired box gene 4	NM_001159925|Pax4|18506|paired box gene 4	NM_001159926|Pax4|18506|paired box gene 4	NM_011038|Pax4|18506|paired box gene 4
mm9_v1_chr6_+_122463663_122463700	0.0250774	EOMES.p2	AK003479|Mfap5|50530|microfibrillar associated protein 5	AF180805|Mfap5|50530|microfibrillar associated protein 5	NM_015776|Mfap5|50530|microfibrillar associated protein 5	BC025131|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr2_-_91773029_91773128	0.0250187	EOMES.p2	
mm9_v1_chr7_-_107475377_107475426	0.0247219	EOMES.p2	
mm9_v1_chr11_+_23980676_23980703	0.0246338	EOMES.p2	AK045556|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_001159290|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr4_-_126002442_126002551	0.0244122	EOMES.p2	AB027138|Tekt2|24084|tektin 2	NM_011902|Tekt2|24084|tektin 2	BC008140|Tekt2|24084|tektin 2
mm9_v1_chr6_-_115570256_115570290	0.0241576	EOMES.p2	AB052739|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr18_+_25224729_25224737	0.0240494	EOMES.p2	BC060607|Fhod3|225288|formin homology 2 domain containing 3
mm9_v1_chr3_+_88987108_88987146	0.0236769	EOMES.p2	BC068123|Fam189b|68521|family with sequence similarity 189, member B	BC088990|Fam189b|68521|family with sequence similarity 189, member B	NM_001014995|Fam189b|68521|family with sequence similarity 189, member B
mm9_v1_chrX_+_159339561_159339801	0.0234626	EOMES.p2	AK084595|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK085381|Ctps2|55936|cytidine 5'-triphosphate synthase 2	BC003257|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK150966|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK151597|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK164206|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK032018|Ctps2|55936|cytidine 5'-triphosphate synthase 2
mm9_v1_chr13_-_115248787_115248889	0.0234207	EOMES.p2	X83377|Fst|14313|follistatin	Z29532|Fst|14313|follistatin
mm9_v1_chr2_+_13504271_13504305	0.0233973	EOMES.p2	
mm9_v1_chr15_+_79059603_79059603	0.0232632	EOMES.p2	NM_008837|Pick1|18693|protein interacting with C kinase 1
mm9_v1_chr3_+_94497485_94497530	0.0231683	EOMES.p2	NM_019414|Selenbp2|20342|selenium binding protein 2	S56599|Selenbp2|20342|selenium binding protein 2	BC024106|Selenbp2|20342|selenium binding protein 2
mm9_v1_chr9_-_114549148_114549229	0.0231161	EOMES.p2	AK149944|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK167288|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC025554|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK029103|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	NM_153585|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK080503|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK157824|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr15_+_58720783_58720964	0.023108	EOMES.p2	AK029069|Rnf139|75841|ring finger protein 139	NM_175226|Rnf139|75841|ring finger protein 139	AK028400|Rnf139|75841|ring finger protein 139	BC052901|Rnf139|75841|ring finger protein 139	AK033506|Rnf139|75841|ring finger protein 139	AK171807|Tatdn1|69694|TatD DNase domain containing 1
mm9_v1_chr3_-_29912113_29912128	0.0230205	EOMES.p2	AK085548|Mecom|14013|MDS1 and EVI1 complex locus	NM_007963|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr8_+_87550720_87550841	0.022781	EOMES.p2	BC023284|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	BC029622|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	NM_026760|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	AK009653|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	AK003299|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene
mm9_v1_chr15_+_67008567_67008676	0.0226897	EOMES.p2	AK033336|LOC432961|432961|hypothetical LOC432961
mm9_v1_chr4_-_6918703_6918738	0.0226878	EOMES.p2	AK051947|Tox|252838|thymocyte selection-associated high mobility group box
mm9_v1_chr5_+_53132801_53132856	0.0225546	EOMES.p2	NM_025951|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	NM_028744|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AK035523|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AK170730|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AK016754|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AY148879|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AK011751|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta
mm9_v1_chr11_-_51419012_51419040	0.0223837	EOMES.p2	AK207379|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr17_-_27327042_27327306	0.0222238	EOMES.p2	AK217086|Lemd2|224640|LEM domain containing 2	AK212367|Lemd2|224640|LEM domain containing 2
mm9_v1_chr2_-_132078946_132078953	0.0220471	EOMES.p2	AK151411|Pcna|18538|proliferating cell nuclear antigen
mm9_v1_chr3_-_153574996_153575274	0.021608	EOMES.p2	AK160162|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC003948|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC021335|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	AF231926|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	U12922|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC132473|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC138547|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145323|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145324|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145325|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145326|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	NM_011231|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC057661|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit
mm9_v1_chr11_-_97141651_97141696	0.0215679	EOMES.p2	AK133898|Npepps|19155|aminopeptidase puromycin sensitive
mm9_v1_chr7_-_133938863_133938974	0.021513	EOMES.p2	
mm9_v1_chr13_+_119503505_119503505	0.0214676	EOMES.p2	AK045267|Fgf10|14165|fibroblast growth factor 10	NM_008002|Fgf10|14165|fibroblast growth factor 10
mm9_v1_chr10_-_18463500_18463563	0.0213506	EOMES.p2	AK165602|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed	AK148343|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed	AK147963|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed	AK147679|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed	NM_001033258|D10Bwg1379e|215821|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
mm9_v1_chr13_+_75977323_75977523	0.0212957	EOMES.p2	NM_053108|Glrx|93692|glutaredoxin	AK013722|Glrx|93692|glutaredoxin	AK153086|Glrx|93692|glutaredoxin	AF109314|Glrx|93692|glutaredoxin	AB013137|Glrx|93692|glutaredoxin	BC012642|Glrx|93692|glutaredoxin	BC054418|Glrx|93692|glutaredoxin	AF276917|Glrx|93692|glutaredoxin
mm9_v1_chrX_+_91881407_91881417	0.0211288	EOMES.p2	NM_008179|Gspt2|14853|G1 to S phase transition 2	AK050859|Gspt2|14853|G1 to S phase transition 2	AK019241|Gspt2|14853|G1 to S phase transition 2
mm9_v1_chr8_+_124474484_124474529	0.0210429	EOMES.p2	BC021650|Banp|53325|BTG3 associated nuclear protein	BC022168|Banp|53325|BTG3 associated nuclear protein	AK154088|Banp|53325|BTG3 associated nuclear protein
mm9_v1_chr11_-_74491006_74491182	0.0209208	EOMES.p2	AK152284|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	AK164276|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm9_v1_chr2_-_60589953_60589966	0.0209039	EOMES.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr9_-_107981650_107981660	0.0204937	EOMES.p2	AK158320|Rnf123|84585|ring finger protein 123
mm9_v1_chr7_-_16844541_16844615	0.0202947	EOMES.p2	AK158027|C5ar1|12273|complement component 5a receptor 1
mm9_v1_chr11_-_59850365_59850382	0.0201359	EOMES.p2	AY334571|Pemt|18618|phosphatidylethanolamine N-methyltransferase
mm9_v1_chr8_+_125927553_125927654	0.0201358	EOMES.p2	AK212341|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)
mm9_v1_chr10_-_61441842_61441910	0.0198397	EOMES.p2	NM_007731|Col13a1|12817|collagen, type XIII, alpha 1	U30292|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr5_-_46247789_46247790	0.019622	EOMES.p2	AB076078|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK042567|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	NM_172153|Lcorl|209707|ligand dependent nuclear receptor corepressor-like
mm9_v1_chr7_-_147268150_147268199	0.0194424	EOMES.p2	BC049663|Caly|68566|calcyon neuron-specific vesicular protein	NM_001190386|Caly|68566|calcyon neuron-specific vesicular protein
mm9_v1_chr4_+_134483092_134483164	0.0192624	EOMES.p2	
mm9_v1_chr19_-_7416286_7416363	0.0192254	EOMES.p2	BC058556|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	AK172444|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_001080388|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_001080389|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_007928|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr15_-_99288178_99288178	0.0192206	EOMES.p2	BC072572|Nckap5l|380969|NCK-associated protein 5-like	NM_001001884|Nckap5l|380969|NCK-associated protein 5-like
mm9_v1_chr6_-_54767627_54767644	0.0192153	EOMES.p2	AK011926|2610209C05Rik|70449|RIKEN cDNA 2610209C05 gene
mm9_v1_chr11_+_6963421_6963491	0.0191765	EOMES.p2	NM_009622|Adcy1|432530|adenylate cyclase 1
mm9_v1_chr2_+_164388211_164388224	0.0189223	EOMES.p2	AK005519|Wfdc2|67701|WAP four-disulfide core domain 2	NM_026323|Wfdc2|67701|WAP four-disulfide core domain 2	AF334269|Wfdc2|67701|WAP four-disulfide core domain 2	BC099427|Wfdc2|67701|WAP four-disulfide core domain 2
mm9_v1_chrX_+_95345000_95345120	0.0188658	EOMES.p2	X59592|Ar|11835|androgen receptor	S56585|Ar|11835|androgen receptor	AK133647|Ar|11835|androgen receptor	NM_013476|Ar|11835|androgen receptor	X53779|Ar|11835|androgen receptor	X59411|Ar|11835|androgen receptor	M37890|Ar|11835|androgen receptor
mm9_v1_chr2_+_152052575_152052697	0.0188227	EOMES.p2	NM_007788|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide	AK031617|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide	AK146032|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide	BC060742|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide	U51866|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide	AK158077|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide	BC069919|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide	AK011501|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide	BC026149|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide	BC089343|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide
mm9_v1_chr13_-_84204320_84204376	0.0187408	EOMES.p2	AK082072|LOC553095|553095|hypothetical LOC553095
mm9_v1_chr1_-_34876794_34876809	0.0185339	EOMES.p2	AK180629|Fam168b|214469|family with sequence similarity 168, member B
mm9_v1_chr17_+_26339936_26339946	0.0184588	EOMES.p2	AK039314|Rgs11|50782|regulator of G-protein signaling 11	BC037655|Rgs11|50782|regulator of G-protein signaling 11
mm9_v1_chr5_+_3344201_3344322	0.0184189	EOMES.p2	AK078973|Cdk6|12571|cyclin-dependent kinase 6	AF132483|Cdk6|12571|cyclin-dependent kinase 6	NM_009873|Cdk6|12571|cyclin-dependent kinase 6	BC119360|Cdk6|12571|cyclin-dependent kinase 6	BC120595|Cdk6|12571|cyclin-dependent kinase 6
mm9_v1_chr2_-_23904343_23904369	0.0183497	EOMES.p2	AB444950|Hnmt|140483|histamine N-methyltransferase	AB444951|Hnmt|140483|histamine N-methyltransferase	AK160131|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr5_+_112772106_112772123	0.0180867	EOMES.p2	AK081489|Hps4|192232|Hermansky-Pudlak syndrome 4 homolog (human)	NM_138646|Hps4|192232|Hermansky-Pudlak syndrome 4 homolog (human)
mm9_v1_chrX_+_45976650_45976756	0.0180738	EOMES.p2	AF076981|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535150|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535151|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	NM_011398|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr17_+_78599825_78599875	0.0180593	EOMES.p2	BC100348|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr9_+_43901941_43901990	0.0180556	EOMES.p2	AK047204|Usp2|53376|ubiquitin specific peptidase 2	AK081112|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr9_-_39380841_39380898	0.0180456	EOMES.p2	NM_146508|Olfr959|258501|olfactory receptor 959	BC120617|Olfr959|258501|olfactory receptor 959	BC120619|Olfr959|258501|olfactory receptor 959
mm9_v1_chr2_-_113878535_113878550	0.0178174	EOMES.p2	BC062138|Actc1|11464|actin, alpha, cardiac muscle 1	AK014303|Actc1|11464|actin, alpha, cardiac muscle 1	AK146496|Actc1|11464|actin, alpha, cardiac muscle 1	AK146899|Actc1|11464|actin, alpha, cardiac muscle 1	AK168637|Actc1|11464|actin, alpha, cardiac muscle 1	AK168661|Actc1|11464|actin, alpha, cardiac muscle 1	AK168831|Actc1|11464|actin, alpha, cardiac muscle 1	AK169161|Actc1|11464|actin, alpha, cardiac muscle 1	AK169165|Actc1|11464|actin, alpha, cardiac muscle 1	BC100600|Actc1|11464|actin, alpha, cardiac muscle 1	NM_009608|Actc1|11464|actin, alpha, cardiac muscle 1	AK014307|Actc1|11464|actin, alpha, cardiac muscle 1
mm9_v1_chr19_+_22767298_22767313	0.0177036	EOMES.p2	AK052064|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK084402|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK044533|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK051934|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr2_-_118855069_118855083	0.0175148	EOMES.p2	BC052687|Ccdc32|269336|coiled-coil domain containing 32
mm9_v1_chr17_+_47641999_47642189	0.0173241	EOMES.p2	NM_001081635|Ccnd3|12445|cyclin D3	NM_001081636|Ccnd3|12445|cyclin D3	AK161758|Ccnd3|12445|cyclin D3	AK083384|Ccnd3|12445|cyclin D3	AK020317|Ccnd3|12445|cyclin D3
mm9_v1_chr11_-_54776398_54776449	0.0171841	EOMES.p2	AK172890|Tnip1|57783|TNFAIP3 interacting protein 1	AK156131|Tnip1|57783|TNFAIP3 interacting protein 1	BC008665|Tnip1|57783|TNFAIP3 interacting protein 1	AJ242777|Tnip1|57783|TNFAIP3 interacting protein 1	AJ242778|Tnip1|57783|TNFAIP3 interacting protein 1	AK170841|Tnip1|57783|TNFAIP3 interacting protein 1	NM_021327|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr14_-_55735399_55735483	0.016894	EOMES.p2	AK033956|Jph4|319984|junctophilin 4	AK034118|Jph4|319984|junctophilin 4	AK036161|Jph4|319984|junctophilin 4	AK028257|Jph4|319984|junctophilin 4
mm9_v1_chr14_-_45479028_45479049	0.0167861	EOMES.p2	BC132297|Ptgdr|19214|prostaglandin D receptor	AK032488|Ptgdr|19214|prostaglandin D receptor	NM_008962|Ptgdr|19214|prostaglandin D receptor
mm9_v1_chr4_+_126530769_126530837	0.0167242	EOMES.p2	
mm9_v1_chr4_+_126469146_126469183	0.0166081	EOMES.p2	AK177499|AU040320|100317|expressed sequence AU040320
mm9_v1_chr3_-_92261456_92261538	0.0165943	EOMES.p2	NM_011478|Sprr3|20766|small proline-rich protein 3	BC125629|Sprr3|20766|small proline-rich protein 3
mm9_v1_chr17_+_24889931_24889960	0.0165822	EOMES.p2	AK146974|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	AY574375|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	NM_001012402|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC132520|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC138814|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC145424|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6
mm9_v1_chr1_+_17591981_17592085	0.0165529	EOMES.p2	AK030960|Pi15|94227|peptidase inhibitor 15	NM_053191|Pi15|94227|peptidase inhibitor 15	AK040961|Pi15|94227|peptidase inhibitor 15	AF329196|Pi15|94227|peptidase inhibitor 15	BC116705|Pi15|94227|peptidase inhibitor 15
mm9_v1_chr5_+_34185760_34185844	0.0164752	EOMES.p2	NM_001081102|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_001177884|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_175231|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	BC079668|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)
mm9_v1_chr8_+_121970569_121970618	0.0162326	EOMES.p2	AF411253|Necab2|117148|N-terminal EF-hand calcium binding protein 2	NM_054095|Necab2|117148|N-terminal EF-hand calcium binding protein 2
mm9_v1_chr12_+_89961317_89961336	0.0160168	EOMES.p2	AK078216|Nrxn3|18191|neurexin III	AK082055|Nrxn3|18191|neurexin III	NM_001198587|Nrxn3|18191|neurexin III	AK149250|Nrxn3|18191|neurexin III
mm9_v1_chr14_-_45838944_45839057	0.0160011	EOMES.p2	BC052488|Txndc16|70561|thioredoxin domain containing 16	AK017582|Txndc16|70561|thioredoxin domain containing 16	AK034025|Txndc16|70561|thioredoxin domain containing 16
mm9_v1_chr3_-_83967952_83967954	0.015991	EOMES.p2	AK054540|Trim2|80890|tripartite motif-containing 2
mm9_v1_chr3_+_105255247_105255337	0.0159556	EOMES.p2	NM_001039347|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AK147574|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr5_+_17080553_17080681	0.0159236	EOMES.p2	AK034239|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	AK078589|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	BC066852|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	NM_013657|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	X85994|Sema3c|20348|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm9_v1_chr7_+_107154913_107155009	0.0158654	EOMES.p2	NM_133709|Chrdl2|69121|chordin-like 2	BC019399|Chrdl2|69121|chordin-like 2	AF338222|Chrdl2|69121|chordin-like 2
mm9_v1_chr13_-_115248924_115248982	0.0158137	EOMES.p2	AK083556|Fst|14313|follistatin	NM_008046|Fst|14313|follistatin	BC144926|Fst|14313|follistatin	BC145945|Fst|14313|follistatin
mm9_v1_chr6_-_124688630_124688780	0.0158035	EOMES.p2	AK150509|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK132509|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	NM_001077705|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6
mm9_v1_chr2_-_102241053_102241195	0.0156308	EOMES.p2	AJ278191|Trim44|80985|tripartite motif-containing 44	NM_020267|Trim44|80985|tripartite motif-containing 44
mm9_v1_chr11_-_94565812_94565812	0.0156077	EOMES.p2	AK082500|Gm11541|432589|predicted gene 11541	BC147833|Gm11541|432589|predicted gene 11541	BC147838|Gm11541|432589|predicted gene 11541	NM_001007584|Gm11541|432589|predicted gene 11541
mm9_v1_chr18_-_36886051_36886289	0.0152676	EOMES.p2	CT010355|Cd14|12475|CD14 antigen	X13333|Cd14|12475|CD14 antigen	AK156262|Cd14|12475|CD14 antigen	AK152427|Cd14|12475|CD14 antigen	AK153229|Cd14|12475|CD14 antigen
mm9_v1_chr4_-_107759668_107759707	0.015237	EOMES.p2	
mm9_v1_chr4_+_123613778_123613862	0.0152153	EOMES.p2	AK003876|Rragc|54170|Ras-related GTP binding C	AK196968|Rragc|54170|Ras-related GTP binding C	AK177349|Rragc|54170|Ras-related GTP binding C	AK196201|Rragc|54170|Ras-related GTP binding C	AK204008|Rragc|54170|Ras-related GTP binding C	AK213206|Rragc|54170|Ras-related GTP binding C
mm9_v1_chr6_-_119305193_119305208	0.0151455	EOMES.p2	BC030936|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr1_-_88567078_88567149	0.0151141	EOMES.p2	BC111834|Nppc|18159|natriuretic peptide type C	AK036176|Nppc|18159|natriuretic peptide type C	NM_010933|Nppc|18159|natriuretic peptide type C	AK020093|Nppc|18159|natriuretic peptide type C
mm9_v1_chr7_-_106387077_106387128	0.0149958	EOMES.p2	AY157609|Mogat2|233549|monoacylglycerol O-acyltransferase 2	AK049560|Mogat2|233549|monoacylglycerol O-acyltransferase 2	BC052831|Mogat2|233549|monoacylglycerol O-acyltransferase 2	NM_177448|Mogat2|233549|monoacylglycerol O-acyltransferase 2	AK133854|Mogat2|233549|monoacylglycerol O-acyltransferase 2
mm9_v1_chr18_+_78021267_78021344	0.0147589	EOMES.p2	
mm9_v1_chr9_-_110019806_110019945	0.0146475	EOMES.p2	BC062885|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK153969|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK184646|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK159601|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK146326|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr3_+_17954689_17954736	0.0142119	EOMES.p2	AF218865|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr11_+_74739357_74739420	0.0142109	EOMES.p2	BC047279|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC066040|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001002764|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC077715|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC016550|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr15_+_74346624_74346672	0.0140808	EOMES.p2	AK147607|Bai1|107831|brain-specific angiogenesis inhibitor 1	NM_174991|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147456|Bai1|107831|brain-specific angiogenesis inhibitor 1	AK147459|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr13_-_115891917_115891936	0.0140421	EOMES.p2	AK137169|Itga1|109700|integrin alpha 1
mm9_v1_chr7_+_4971977_4971977	0.0137849	EOMES.p2	AK154737|Zfp865|319748|zinc finger protein 865	NM_001033383|Zfp865|319748|zinc finger protein 865
mm9_v1_chr19_-_41068625_41068698	0.0137371	EOMES.p2	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr9_-_107981593_107981623	0.0135815	EOMES.p2	BC025530|Rnf123|84585|ring finger protein 123
mm9_v1_chr15_-_96473193_96473343	0.0135196	EOMES.p2	AK162612|Slc38a1|105727|solute carrier family 38, member 1	AK081724|Slc38a1|105727|solute carrier family 38, member 1	NM_001166458|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr5_-_122026484_122026578	0.0134417	EOMES.p2	AK210785|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial
mm9_v1_chr14_-_20902310_20902393	0.0133384	EOMES.p2	BC027644|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK031748|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK007941|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK015650|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	NM_026209|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene
mm9_v1_chr15_+_12754582_12754660	0.0133371	EOMES.p2	AK144147|Drosha|14000|drosha, ribonuclease type III	BC088999|Drosha|14000|drosha, ribonuclease type III	AK148640|Drosha|14000|drosha, ribonuclease type III
mm9_v1_chr1_+_74648028_74648212	0.0129275	EOMES.p2	NM_175031|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	AK029842|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	BC043103|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	AK007188|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	BC049721|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	BC058698|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)
mm9_v1_chr17_+_26339883_26339926	0.0127237	EOMES.p2	AK080707|Rgs11|50782|regulator of G-protein signaling 11	NM_001081069|Rgs11|50782|regulator of G-protein signaling 11	BC049910|Rgs11|50782|regulator of G-protein signaling 11
mm9_v1_chr2_-_28438389_28438521	0.0125565	EOMES.p2	AK045419|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr15_+_6395353_6395370	0.0123711	EOMES.p2	X05475|C9|12279|complement component 9
mm9_v1_chrX_-_148776674_148776969	0.0123205	EOMES.p2	BC004006|Tspyl2|52808|TSPY-like 2	BC043694|Tspyl2|52808|TSPY-like 2	AY273809|Tspyl2|52808|TSPY-like 2	BC054393|Tspyl2|52808|TSPY-like 2	AK018700|Tspyl2|52808|TSPY-like 2
mm9_v1_chr7_-_52965801_52965838	0.0122113	EOMES.p2	AK198375|Sphk2|56632|sphingosine kinase 2	AK202851|Sphk2|56632|sphingosine kinase 2
mm9_v1_chr16_+_44139908_44140168	0.0121686	EOMES.p2	NM_028108|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK167141|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK168394|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC057117|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK135658|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK156791|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK011160|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK145345|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC046283|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC004086|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK198408|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC055846|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm9_v1_chr15_-_66761030_66761081	0.0121288	EOMES.p2	
mm9_v1_chr6_+_129491258_129491317	0.0118792	EOMES.p2	
mm9_v1_chr9_-_107968072_107968105	0.0116405	EOMES.p2	AK219946|Rnf123|84585|ring finger protein 123	AK183260|Rnf123|84585|ring finger protein 123	AK191993|Rnf123|84585|ring finger protein 123	AK194363|Rnf123|84585|ring finger protein 123	AK204665|Rnf123|84585|ring finger protein 123	AK213432|Rnf123|84585|ring finger protein 123
mm9_v1_chr14_-_55196138_55196410	0.0115676	EOMES.p2	BC011035|Jub|16475|ajuba	NM_010590|Jub|16475|ajuba	U79776|Jub|16475|ajuba
mm9_v1_chr11_-_41814008_41814185	0.0114967	EOMES.p2	M86572|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	BC031762|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	M62374|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_008073|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK034338|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr16_+_13265171_13265171	0.0114641	EOMES.p2	BC028459|Mkl2|239719|MKL/myocardin-like 2	NM_181860|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr15_-_95358674_95358735	0.0113448	EOMES.p2	U59230|Nell2|54003|NEL-like 2 (chicken)
mm9_v1_chr8_+_63111621_63111675	0.0112647	EOMES.p2	AK089654|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_027756|Mfap3l|71306|microfibrillar-associated protein 3-like	BC095950|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr11_-_109334465_109334613	0.0112084	EOMES.p2	AK170472|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	BC017129|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	NM_134038|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm9_v1_chr8_+_114464639_114464646	0.0108941	EOMES.p2	BC026798|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm9_v1_chr19_-_16342088_16342126	0.0108021	EOMES.p2	
mm9_v1_chrX_-_98615554_98615567	0.0107868	EOMES.p2	AK082075|Zmym3|56364|zinc finger, MYM-type 3	NM_001177988|Zmym3|56364|zinc finger, MYM-type 3	NM_019831|Zmym3|56364|zinc finger, MYM-type 3
mm9_v1_chr9_-_107981626_107981629	0.0106677	EOMES.p2	AK172244|Rnf123|84585|ring finger protein 123
mm9_v1_chr8_+_107450138_107450197	0.0106673	EOMES.p2	NM_001163756|Ces2e|234673|carboxylesterase 2E	NM_172759|Ces2e|234673|carboxylesterase 2E	AK077248|Ces2e|234673|carboxylesterase 2E	BC055062|Ces2e|234673|carboxylesterase 2E	AK033563|Ces2e|234673|carboxylesterase 2E
mm9_v1_chr19_-_13870096_13870098	0.0106011	EOMES.p2	BC111435|Olfr1497|258736|olfactory receptor 1497	NM_146741|Olfr1497|258736|olfactory receptor 1497
mm9_v1_chr14_-_21552866_21552879	0.0105454	EOMES.p2	AK202625|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
mm9_v1_chrX_-_49518428_49518445	0.0105048	EOMES.p2	X83577|Gpc4|14735|glypican 4
mm9_v1_chr19_-_44471675_44471892	0.0104483	EOMES.p2	AK012370|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr3_+_104591955_104591985	0.0101198	EOMES.p2	AK160650|Rhoc|11853|ras homolog gene family, member C	X80638|Rhoc|11853|ras homolog gene family, member C	BC004627|Rhoc|11853|ras homolog gene family, member C
mm9_v1_chr5_-_109058768_109058782	0.00997771	EOMES.p2	AK133581|Gak|231580|cyclin G associated kinase	AK150112|Gak|231580|cyclin G associated kinase	AK166682|Gak|231580|cyclin G associated kinase
mm9_v1_chr5_-_138125903_138125907	0.00997678	EOMES.p2	AK155221|Agfg2|231801|ArfGAP with FG repeats 2
mm9_v1_chr19_+_5568045_5568150	0.00990142	EOMES.p2	AK144121|Gm962|381201|predicted gene 962	NM_001033448|Gm962|381201|predicted gene 962	BC147482|Gm962|381201|predicted gene 962
mm9_v1_chr11_-_100355280_100355392	0.00978317	EOMES.p2	AK136812|Acly|104112|ATP citrate lyase	AK043434|Acly|104112|ATP citrate lyase
mm9_v1_chr16_+_33380860_33381006	0.00977513	EOMES.p2	NM_011749|Zfp148|22661|zinc finger protein 148	AF316548|Zfp148|22661|zinc finger protein 148	X98096|Zfp148|22661|zinc finger protein 148	BC026144|Zfp148|22661|zinc finger protein 148
mm9_v1_chr5_-_65928297_65928366	0.00953697	EOMES.p2	AK044403|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene
mm9_v1_chr7_-_17647732_17647775	0.00951812	EOMES.p2	AF416641|Hif3a|53417|hypoxia inducible factor 3, alpha subunit	AB289606|Hif3a|53417|hypoxia inducible factor 3, alpha subunit	NM_001162950|Hif3a|53417|hypoxia inducible factor 3, alpha subunit
mm9_v1_chr12_-_42212337_42212337	0.00943082	EOMES.p2	BC069041|Lrrn3|16981|leucine rich repeat protein 3, neuronal	NM_010733|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr11_+_74584328_74584437	0.0092702	EOMES.p2	AK013306|Mett10d|67493|methyltransferase 10 domain containing	BC022902|Mett10d|67493|methyltransferase 10 domain containing	AK145022|Mett10d|67493|methyltransferase 10 domain containing	AK011780|Mett10d|67493|methyltransferase 10 domain containing	AK012739|Mett10d|67493|methyltransferase 10 domain containing	NM_026197|Mett10d|67493|methyltransferase 10 domain containing	AK145662|Mett10d|67493|methyltransferase 10 domain containing	AK029045|Mett10d|67493|methyltransferase 10 domain containing	AK161574|Mett10d|67493|methyltransferase 10 domain containing	BC003467|Mett10d|67493|methyltransferase 10 domain containing	AK168798|Mett10d|67493|methyltransferase 10 domain containing	BC037452|Mett10d|67493|methyltransferase 10 domain containing	BC054724|Mett10d|67493|methyltransferase 10 domain containing	BC049897|Mett10d|67493|methyltransferase 10 domain containing
mm9_v1_chr2_+_34729973_34730037	0.00920912	EOMES.p2	AK021330|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	BC021771|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr1_-_42751652_42751673	0.00912744	EOMES.p2	BC094545|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	AK011437|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	AK019154|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	AK048630|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr19_-_41818111_41818169	0.00905084	EOMES.p2	AK122376|Slit1|20562|slit homolog 1 (Drosophila)	BC057131|Slit1|20562|slit homolog 1 (Drosophila)	BC062091|Slit1|20562|slit homolog 1 (Drosophila)
mm9_v1_chr5_-_137974398_137974535	0.00896737	EOMES.p2	BC062178|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK002604|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK151628|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	NM_010312|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	Y11970|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK146941|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2
mm9_v1_chr10_-_26094990_26095024	0.00890016	EOMES.p2	AK045667|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	NM_172787|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK049597|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr4_-_119212968_119213006	0.00887408	EOMES.p2	AK086686|AA415398|433752|expressed sequence AA415398
mm9_v1_chr9_-_21936207_21936326	0.00884566	EOMES.p2	BC012911|Acp5|11433|acid phosphatase 5, tartrate resistant	BC029644|Acp5|11433|acid phosphatase 5, tartrate resistant	BC019160|Acp5|11433|acid phosphatase 5, tartrate resistant	NM_001102404|Acp5|11433|acid phosphatase 5, tartrate resistant
mm9_v1_chr9_-_110892114_110892227	0.00882102	EOMES.p2	AY562227|Rtp3|235636|receptor transporter protein 3	BC150678|Rtp3|235636|receptor transporter protein 3	AJ428064|Rtp3|235636|receptor transporter protein 3	BC112903|Rtp3|235636|receptor transporter protein 3	NM_153100|Rtp3|235636|receptor transporter protein 3
mm9_v1_chr13_+_113657736_113657889	0.00866804	EOMES.p2	
mm9_v1_chr1_-_3661578_3661628	0.00845438	EOMES.p2	AY534250|Xkr4|497097|X Kell blood group precursor related family member 4	NM_001011874|Xkr4|497097|X Kell blood group precursor related family member 4
mm9_v1_chr10_-_77707385_77707420	0.00841529	EOMES.p2	AK166500|Trappc10|216131|trafficking protein particle complex 10	NM_001081055|Trappc10|216131|trafficking protein particle complex 10
mm9_v1_chr1_-_89291303_89291307	0.00836159	EOMES.p2	NM_001110227|Kcnj13|100040591|potassium inwardly-rectifying channel, subfamily J, member 13
mm9_v1_chr3_+_87885892_87885972	0.00825461	EOMES.p2	BC151102|Iqgap3|404710|IQ motif containing GTPase activating protein 3	AK050913|Iqgap3|404710|IQ motif containing GTPase activating protein 3	AK162700|Iqgap3|404710|IQ motif containing GTPase activating protein 3	BC068159|Iqgap3|404710|IQ motif containing GTPase activating protein 3	NM_001033484|Iqgap3|404710|IQ motif containing GTPase activating protein 3
mm9_v1_chr2_-_28438708_28438725	0.00815317	EOMES.p2	BC027247|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	BC039171|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chrX_-_103207106_103207254	0.00813047	EOMES.p2	AK144696|Magt1|67075|magnesium transporter 1	AK012185|Magt1|67075|magnesium transporter 1	AK013243|Magt1|67075|magnesium transporter 1	AK136622|Magt1|67075|magnesium transporter 1	BC003881|Magt1|67075|magnesium transporter 1	AK018623|Magt1|67075|magnesium transporter 1	AK010320|Magt1|67075|magnesium transporter 1	DQ000005|Magt1|67075|magnesium transporter 1	NM_001190409|Magt1|67075|magnesium transporter 1	NM_025952|Magt1|67075|magnesium transporter 1
mm9_v1_chr6_+_123179860_123179891	0.00811413	EOMES.p2	NM_001190320|Clec4n|56620|C-type lectin domain family 4, member n	NM_001190321|Clec4n|56620|C-type lectin domain family 4, member n	NM_020001|Clec4n|56620|C-type lectin domain family 4, member n	AK089166|Clec4n|56620|C-type lectin domain family 4, member n	AK131697|Clec4n|56620|C-type lectin domain family 4, member n	AK154673|Clec4n|56620|C-type lectin domain family 4, member n	AK171046|Clec4n|56620|C-type lectin domain family 4, member n	AF240357|Clec4n|56620|C-type lectin domain family 4, member n	AF240358|Clec4n|56620|C-type lectin domain family 4, member n	AF240359|Clec4n|56620|C-type lectin domain family 4, member n	BC023008|Clec4n|56620|C-type lectin domain family 4, member n
mm9_v1_chrX_-_103798800_103798934	0.00801362	EOMES.p2	AK033476|Cysltr1|58861|cysteinyl leukotriene receptor 1	NM_021476|Cysltr1|58861|cysteinyl leukotriene receptor 1	AF205830|Cysltr1|58861|cysteinyl leukotriene receptor 1	BC027102|Cysltr1|58861|cysteinyl leukotriene receptor 1	AB044087|Cysltr1|58861|cysteinyl leukotriene receptor 1	AF263370|Cysltr1|58861|cysteinyl leukotriene receptor 1
mm9_v1_chr2_+_120229988_120230073	0.00795604	EOMES.p2	BC058197|Ganc|76051|glucosidase, alpha; neutral C
mm9_v1_chr3_+_104583973_104584035	0.00788202	EOMES.p2	AY184802|Ppm1j|71887|protein phosphatase 1J	NM_027982|Ppm1j|71887|protein phosphatase 1J	BC117498|Ppm1j|71887|protein phosphatase 1J	BC121788|Ppm1j|71887|protein phosphatase 1J	AK009235|Ppm1j|71887|protein phosphatase 1J
mm9_v1_chr3_-_87862384_87862439	0.00787594	EOMES.p2	BC058362|Apoa1bp|246703|apolipoprotein A-I binding protein	AJ344092|Apoa1bp|246703|apolipoprotein A-I binding protein	AY566271|Apoa1bp|246703|apolipoprotein A-I binding protein	NM_144897|Apoa1bp|246703|apolipoprotein A-I binding protein	AK159846|Apoa1bp|246703|apolipoprotein A-I binding protein
mm9_v1_chr4_-_150421459_150421590	0.0077727	EOMES.p2	
mm9_v1_chr7_+_51357661_51357727	0.00757687	EOMES.p2	AB039276|Klk1b21|16616|kallikrein 1-related peptidase b21	NM_010642|Klk1b21|16616|kallikrein 1-related peptidase b21	AK144221|Klk1b21|16616|kallikrein 1-related peptidase b21	BC145383|Klk1b21|16616|kallikrein 1-related peptidase b21	BC012243|Klk1b21|16616|kallikrein 1-related peptidase b21
mm9_v1_chr8_+_106625524_106625609	0.0075111	EOMES.p2	NM_009868|Cdh5|12562|cadherin 5	AK164474|Cdh5|12562|cadherin 5	D63942|Cdh5|12562|cadherin 5	AK167620|Cdh5|12562|cadherin 5	BC054790|Cdh5|12562|cadherin 5	X83930|Cdh5|12562|cadherin 5
mm9_v1_chr12_-_52847096_52847142	0.00748887	EOMES.p2	BC010205|Hectd1|207304|HECT domain containing 1
mm9_v1_chr6_-_87793898_87794088	0.00747254	EOMES.p2	AK207643|Cnbp|12785|cellular nucleic acid binding protein	AK188144|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr12_+_30219982_30220081	0.007374	EOMES.p2	AK049624|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr13_-_105018845_105018951	0.00736314	EOMES.p2	AK162956|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	AK050581|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	AK028532|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	BC119282|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	BC119310|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	AK043316|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	NM_172807|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	AK039698|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1
mm9_v1_chr5_-_138042267_138042299	0.00727092	EOMES.p2	BC039620|Mospd3|68929|motile sperm domain containing 3	NM_030037|Mospd3|68929|motile sperm domain containing 3	BC034167|Mospd3|68929|motile sperm domain containing 3
mm9_v1_chr7_+_112574425_112574538	0.00721685	EOMES.p2	AK053307|Cckbr|12426|cholecystokinin B receptor	AF019371|Cckbr|12426|cholecystokinin B receptor
mm9_v1_chr3_-_88306724_88306855	0.00710866	EOMES.p2	AK180919|Lmna|16905|lamin A
mm9_v1_chr9_-_89599660_89599893	0.00695376	EOMES.p2	BC023338|Tmed3|66111|transmembrane emp24 domain containing 3	AK007544|Tmed3|66111|transmembrane emp24 domain containing 3	AK002698|Tmed3|66111|transmembrane emp24 domain containing 3	AK004545|Tmed3|66111|transmembrane emp24 domain containing 3	NM_025360|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chr19_-_59018112_59018143	0.00688378	EOMES.p2	AK076683|Hspa12a|73442|heat shock protein 12A	AK076668|Hspa12a|73442|heat shock protein 12A	AK087732|Hspa12a|73442|heat shock protein 12A
mm9_v1_chr7_+_17366682_17366755	0.00654146	EOMES.p2	AK148346|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	NM_009201|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	AK157838|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	L42115|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	D85044|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5
mm9_v1_chr18_+_37633193_37633199	0.00647736	EOMES.p2	BC066178|Pcdhb15|93886|protocadherin beta 15	AK038663|Pcdhb15|93886|protocadherin beta 15	NM_053140|Pcdhb15|93886|protocadherin beta 15
mm9_v1_chr1_-_69154627_69154642	0.00647541	EOMES.p2	AK144050|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_010154|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
mm9_v1_chr2_+_122463622_122463653	0.00646226	EOMES.p2	BC049633|AA467197|433470|expressed sequence AA467197	NM_001004174|AA467197|433470|expressed sequence AA467197	AK150561|AA467197|433470|expressed sequence AA467197	AK141297|AA467197|433470|expressed sequence AA467197
mm9_v1_chr3_-_90195440_90195485	0.00628254	EOMES.p2	
mm9_v1_chrX_+_97170927_97171053	0.00627268	EOMES.p2	AK028502|Eda|13607|ectodysplasin-A	AF016627|Eda|13607|ectodysplasin-A	AF016628|Eda|13607|ectodysplasin-A	AF016629|Eda|13607|ectodysplasin-A	AF016630|Eda|13607|ectodysplasin-A	DQ168876|Eda|13607|ectodysplasin-A	DQ168877|Eda|13607|ectodysplasin-A	DQ168878|Eda|13607|ectodysplasin-A	DQ168879|Eda|13607|ectodysplasin-A	DQ168880|Eda|13607|ectodysplasin-A	DQ168881|Eda|13607|ectodysplasin-A	NM_001177937|Eda|13607|ectodysplasin-A	NM_001177938|Eda|13607|ectodysplasin-A	NM_001177939|Eda|13607|ectodysplasin-A	NM_001177940|Eda|13607|ectodysplasin-A	NM_001177941|Eda|13607|ectodysplasin-A	NM_001177942|Eda|13607|ectodysplasin-A	NM_001177943|Eda|13607|ectodysplasin-A	NM_001177944|Eda|13607|ectodysplasin-A	NM_010099|Eda|13607|ectodysplasin-A	AF016631|Eda|13607|ectodysplasin-A	AJ243657|Eda|13607|ectodysplasin-A	AK040754|Eda|13607|ectodysplasin-A	AF004435|Eda|13607|ectodysplasin-A	AJ243658|Eda|13607|ectodysplasin-A	AK137551|Eda|13607|ectodysplasin-A	BC125387|Eda|13607|ectodysplasin-A	BC144790|Eda|13607|ectodysplasin-A	BC144791|Eda|13607|ectodysplasin-A
mm9_v1_chr19_+_46139268_46139363	0.0062698	EOMES.p2	
mm9_v1_chr11_+_95275577_95275627	0.00622217	EOMES.p2	BC043131|Spop|20747|speckle-type POZ protein
mm9_v1_chr15_+_78971760_78971812	0.0061418	EOMES.p2	AK165600|Polr2f|69833|polymerase (RNA) II (DNA directed) polypeptide F	AK169434|Polr2f|69833|polymerase (RNA) II (DNA directed) polypeptide F	AK007913|Polr2f|69833|polymerase (RNA) II (DNA directed) polypeptide F	BC024419|Polr2f|69833|polymerase (RNA) II (DNA directed) polypeptide F	NM_027231|Polr2f|69833|polymerase (RNA) II (DNA directed) polypeptide F
mm9_v1_chr9_+_54758322_54758381	0.00611347	EOMES.p2	AK038058|Ireb2|64602|iron responsive element binding protein 2
mm9_v1_chr18_-_6135924_6136095	0.00610149	EOMES.p2	AK031648|Arhgap12|75415|Rho GTPase activating protein 12	AK012717|Arhgap12|75415|Rho GTPase activating protein 12	AK077063|Arhgap12|75415|Rho GTPase activating protein 12	NM_001039692|Arhgap12|75415|Rho GTPase activating protein 12	NM_029277|Arhgap12|75415|Rho GTPase activating protein 12
mm9_v1_chr14_+_120724163_120724175	0.00580807	EOMES.p2	BC075665|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr8_+_74659692_74659758	0.00577835	EOMES.p2	AK171835|Tpm4|326618|tropomyosin 4
mm9_v1_chr9_+_4383536_4383536	0.00538666	EOMES.p2	AK180204|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	BC014729|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	NM_145609|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene
mm9_v1_chr19_-_4009363_4009461	0.00535619	EOMES.p2	AK178320|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK187850|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK189786|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK209435|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK210493|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK218408|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm9_v1_chr17_+_88035318_88035321	0.005279	EOMES.p2	NM_008532|Epcam|17075|epithelial cell adhesion molecule
mm9_v1_chr11_+_101309725_101309821	0.00509046	EOMES.p2	AK131884|Ifi35|70110|interferon-induced protein 35	NM_027320|Ifi35|70110|interferon-induced protein 35	AK008161|Ifi35|70110|interferon-induced protein 35	BC008158|Ifi35|70110|interferon-induced protein 35
mm9_v1_chr10_+_74869758_74869765	0.00506568	EOMES.p2	AK149373|Upb1|103149|ureidopropionase, beta	AK149480|Upb1|103149|ureidopropionase, beta
mm9_v1_chr11_+_95275392_95275501	0.00502273	EOMES.p2	NM_025287|Spop|20747|speckle-type POZ protein	AK168546|Spop|20747|speckle-type POZ protein	AK030746|Spop|20747|speckle-type POZ protein	AK132383|Spop|20747|speckle-type POZ protein	BC045205|Spop|20747|speckle-type POZ protein	AK004669|Spop|20747|speckle-type POZ protein	AK159482|Spop|20747|speckle-type POZ protein	AK028201|Spop|20747|speckle-type POZ protein	BC064809|Spop|20747|speckle-type POZ protein	AK168185|Spop|20747|speckle-type POZ protein	AK166581|Spop|20747|speckle-type POZ protein	AK160858|Spop|20747|speckle-type POZ protein
mm9_v1_chr16_-_38341897_38341905	0.00498422	EOMES.p2	AK045121|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene
mm9_v1_chr8_+_108379461_108379549	0.00481282	EOMES.p2	BC003949|Thap11|59016|THAP domain containing 11
mm9_v1_chr12_+_114252715_114252763	0.00475716	EOMES.p2	NM_001081170|Pacs2|217893|phosphofurin acidic cluster sorting protein 2	AK036581|Pacs2|217893|phosphofurin acidic cluster sorting protein 2	AK054000|Pacs2|217893|phosphofurin acidic cluster sorting protein 2
mm9_v1_chr7_-_139749889_139749896	0.00455228	EOMES.p2	
mm9_v1_chr19_+_47654508_47654642	0.00448803	EOMES.p2	AF039574|Slk|20874|STE20-like kinase (yeast)	NM_001164639|Slk|20874|STE20-like kinase (yeast)	NM_009289|Slk|20874|STE20-like kinase (yeast)	BC131674|Slk|20874|STE20-like kinase (yeast)	BC131675|Slk|20874|STE20-like kinase (yeast)	AF112855|Slk|20874|STE20-like kinase (yeast)	AK029491|Slk|20874|STE20-like kinase (yeast)
mm9_v1_chr19_+_32831986_32831994	0.00425507	EOMES.p2	U92437|Pten|19211|phosphatase and tensin homolog
mm9_v1_chr6_+_115085096_115085107	0.00407493	EOMES.p2	BC066004|Syn2|20965|synapsin II	BC085129|Syn2|20965|synapsin II
mm9_v1_chr7_-_148629877_148629949	0.00404799	EOMES.p2	BC089373|Lrdd|57913|leucine-rich and death domain containing	BC099686|Lrdd|57913|leucine-rich and death domain containing	BC056987|Lrdd|57913|leucine-rich and death domain containing	AK004702|Lrdd|57913|leucine-rich and death domain containing	AK087880|Lrdd|57913|leucine-rich and death domain containing	AK156863|Lrdd|57913|leucine-rich and death domain containing
mm9_v1_chr3_-_95708606_95708607	0.00404468	EOMES.p2	AK009805|Car14|23831|carbonic anhydrase 14
mm9_v1_chr3_+_59835700_59835727	0.00394007	EOMES.p2	NM_023383|Aadac|67758|arylacetamide deacetylase (esterase)	AK008244|Aadac|67758|arylacetamide deacetylase (esterase)	BC054823|Aadac|67758|arylacetamide deacetylase (esterase)	BC019999|Aadac|67758|arylacetamide deacetylase (esterase)
mm9_v1_chrX_+_139997806_139997811	0.00391252	EOMES.p2	NM_008778|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	BC053403|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr7_-_148725673_148725757	0.00387387	EOMES.p2	AK036717|Chid1|68038|chitinase domain containing 1	AK014071|Chid1|68038|chitinase domain containing 1	AK050655|Chid1|68038|chitinase domain containing 1	BC006876|Chid1|68038|chitinase domain containing 1	AK160156|Chid1|68038|chitinase domain containing 1	AK160200|Chid1|68038|chitinase domain containing 1	BC061063|Chid1|68038|chitinase domain containing 1	AK147377|Chid1|68038|chitinase domain containing 1	AK014141|Chid1|68038|chitinase domain containing 1	AK040002|Chid1|68038|chitinase domain containing 1	NM_001142681|Chid1|68038|chitinase domain containing 1	NM_026522|Chid1|68038|chitinase domain containing 1
mm9_v1_chr10_-_80005514_80005572	0.00385136	EOMES.p2	AK196365|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)
mm9_v1_chrX_+_45872593_45872777	0.00365478	EOMES.p2	D83279|Rab33a|19337|RAB33A, member of RAS oncogene family	NM_011228|Rab33a|19337|RAB33A, member of RAS oncogene family	BC104390|Rab33a|19337|RAB33A, member of RAS oncogene family	BC104391|Rab33a|19337|RAB33A, member of RAS oncogene family	AB232628|Rab33a|19337|RAB33A, member of RAS oncogene family
mm9_v1_chr17_+_25960571_25960660	0.00362638	EOMES.p2	NM_173741|Wdr24|268933|WD repeat domain 24	AK078694|Wdr24|268933|WD repeat domain 24	AK170253|Wdr24|268933|WD repeat domain 24	BC037651|Wdr24|268933|WD repeat domain 24
mm9_v1_chr17_-_13108931_13109013	0.00323102	EOMES.p2	BC011425|Mrpl18|67681|mitochondrial ribosomal protein L18	AK008680|Mrpl18|67681|mitochondrial ribosomal protein L18	NM_026310|Mrpl18|67681|mitochondrial ribosomal protein L18	AK003104|Mrpl18|67681|mitochondrial ribosomal protein L18	AK010150|Mrpl18|67681|mitochondrial ribosomal protein L18
mm9_v1_chr10_+_76038388_76038430	0.00308522	EOMES.p2	NM_080845|Ftcd|14317|formiminotransferase cyclodeaminase	AK165414|Ftcd|14317|formiminotransferase cyclodeaminase	BC024078|Ftcd|14317|formiminotransferase cyclodeaminase	BC010813|Ftcd|14317|formiminotransferase cyclodeaminase
mm9_v1_chr11_+_22902273_22902372	0.00299328	EOMES.p2	
mm9_v1_chr7_-_29164215_29164277	0.00284954	EOMES.p2	M58565|Zfp36|22695|zinc finger protein 36	BC021391|Zfp36|22695|zinc finger protein 36	M57422|Zfp36|22695|zinc finger protein 36	NM_011756|Zfp36|22695|zinc finger protein 36	AK088525|Zfp36|22695|zinc finger protein 36	AK005006|Zfp36|22695|zinc finger protein 36	AK154825|Zfp36|22695|zinc finger protein 36
mm9_v1_chrX_+_63906333_63906333	0.00277648	EOMES.p2	BC111888|Slitrk2|245450|SLIT and NTRK-like family, member 2	BC112406|Slitrk2|245450|SLIT and NTRK-like family, member 2	NM_198863|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr3_+_137004041_137004080	0.00236672	EOMES.p2	NM_001163522|Emcn|59308|endomucin	NM_016885|Emcn|59308|endomucin	AK145825|Emcn|59308|endomucin	AK002616|Emcn|59308|endomucin	AK029348|Emcn|59308|endomucin	BC003706|Emcn|59308|endomucin
mm9_v1_chr10_-_10277885_10278075	0.00231507	EOMES.p2	AB232627|Rab32|67844|RAB32, member RAS oncogene family	AY135650|Rab32|67844|RAB32, member RAS oncogene family	BC016409|Rab32|67844|RAB32, member RAS oncogene family	BC055945|Rab32|67844|RAB32, member RAS oncogene family	AK163620|Rab32|67844|RAB32, member RAS oncogene family	AK151543|Rab32|67844|RAB32, member RAS oncogene family	AK088661|Rab32|67844|RAB32, member RAS oncogene family	NM_026405|Rab32|67844|RAB32, member RAS oncogene family	AK012701|Rab32|67844|RAB32, member RAS oncogene family	AK159102|Rab32|67844|RAB32, member RAS oncogene family	AK159901|Rab32|67844|RAB32, member RAS oncogene family
mm9_v1_chr13_+_40955500_40955723	0.00203968	EOMES.p2	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr14_-_55735114_55735220	0.00200728	EOMES.p2	AB099712|Jph4|319984|junctophilin 4	NM_177049|Jph4|319984|junctophilin 4
mm9_v1_chr18_+_38456364_38456458	0.00198327	EOMES.p2	AK011316|Rnf14|56736|ring finger protein 14	BC049079|Rnf14|56736|ring finger protein 14	NM_001164621|Rnf14|56736|ring finger protein 14
mm9_v1_chr4_-_82698070_82698070	0.00175317	EOMES.p2	AB160986|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_001198811|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr7_-_129276357_129276498	0.00152789	EOMES.p2	BC066140|Palb2|233826|partner and localizer of BRCA2	AK156701|Palb2|233826|partner and localizer of BRCA2	AK157382|Palb2|233826|partner and localizer of BRCA2	BC066139|Palb2|233826|partner and localizer of BRCA2	BC055302|Palb2|233826|partner and localizer of BRCA2	AK154227|Palb2|233826|partner and localizer of BRCA2	AK028653|Palb2|233826|partner and localizer of BRCA2	NM_001081238|Palb2|233826|partner and localizer of BRCA2
mm9_v1_chr5_+_137735875_137735896	0.00149469	EOMES.p2	BC087958|Ufsp1|70240|UFM1-specific peptidase 1	BC016577|Ufsp1|70240|UFM1-specific peptidase 1	AK012343|Ufsp1|70240|UFM1-specific peptidase 1	NM_027356|Ufsp1|70240|UFM1-specific peptidase 1
mm9_v1_chr15_-_12522310_12522310	0.00126691	EOMES.p2	NM_001081064|Pdzd2|68070|PDZ domain containing 2
mm9_v1_chr7_-_17402066_17402094	0.00124345	EOMES.p2	AK156156|Fkrp|243853|fukutin related protein	AK135089|Fkrp|243853|fukutin related protein	AK168308|Fkrp|243853|fukutin related protein	NM_173430|Fkrp|243853|fukutin related protein	AK166068|Fkrp|243853|fukutin related protein
mm9_v1_chr5_+_91456489_91456542	0.00102813	EOMES.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr5_-_23835349_23835431	0.000942722	EOMES.p2	AF012869|Kcnh2|16511|potassium voltage-gated channel, subfamily H (eag-related), member 2	AF034762|Kcnh2|16511|potassium voltage-gated channel, subfamily H (eag-related), member 2
mm9_v1_chr11_+_60230781_60230944	0.0008953	EOMES.p2	AK164644|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	BC052418|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	AK012042|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	BC046821|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	AK142753|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	BC044901|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene
mm9_v1_chr16_+_14705932_14706066	0.000806876	EOMES.p2	AK133968|Snai2|20583|snail homolog 2 (Drosophila)	BC062164|Snai2|20583|snail homolog 2 (Drosophila)	NM_011415|Snai2|20583|snail homolog 2 (Drosophila)	U79550|Snai2|20583|snail homolog 2 (Drosophila)	U97059|Snai2|20583|snail homolog 2 (Drosophila)
mm9_v1_chr11_-_51414445_51414449	0.00075092	EOMES.p2	
mm9_v1_chr5_+_53132872_53132957	0.000649151	EOMES.p2	BC062144|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AF411321|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta
mm9_v1_chr9_-_64188945_64189063	0.000648282	EOMES.p2	AK035357|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK032451|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	BC056939|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK173310|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK150851|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK151780|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK153433|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	NM_001001295|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like
mm9_v1_chr1_-_74328615_74328647	0.000623135	EOMES.p2	AK183196|Aamp|227290|angio-associated migratory protein	AK185087|Aamp|227290|angio-associated migratory protein	AK187699|Aamp|227290|angio-associated migratory protein
mm9_v1_chr7_+_30954893_30954940	0.000566801	EOMES.p2	AK046598|Gm5113|330503|predicted gene 5113	AK147880|Gm5113|330503|predicted gene 5113	NM_001033540|Gm5113|330503|predicted gene 5113
mm9_v1_chr11_+_69464434_69464549	0.000547698	EOMES.p2	AK181941|Fxr2|23879|fragile X mental retardation, autosomal homolog 2	AK202702|Fxr2|23879|fragile X mental retardation, autosomal homolog 2	AK202704|Fxr2|23879|fragile X mental retardation, autosomal homolog 2
mm9_v1_chr16_-_17722915_17723043	0.000524688	EOMES.p2	AF328770|Med15|94112|mediator complex subunit 15	AK131186|Med15|94112|mediator complex subunit 15	AK171628|Med15|94112|mediator complex subunit 15	BC054779|Med15|94112|mediator complex subunit 15	AK166522|Med15|94112|mediator complex subunit 15	AK038915|Med15|94112|mediator complex subunit 15	AK052231|Med15|94112|mediator complex subunit 15	AK142224|Med15|94112|mediator complex subunit 15	NM_001040683|Med15|94112|mediator complex subunit 15	NM_033609|Med15|94112|mediator complex subunit 15	AK169904|Med15|94112|mediator complex subunit 15
mm9_v1_chr17_+_34726750_34726889	0.000363208	EOMES.p2	AK155617|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	NM_134116|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	AK146245|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	BC085186|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	AK144833|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	BC080804|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)
mm9_v1_chr17_-_32326407_32326493	0.000323386	EOMES.p2	AK132483|Ephx3|71932|epoxide hydrolase 3	NM_001033163|Ephx3|71932|epoxide hydrolase 3	AK010021|Ephx3|71932|epoxide hydrolase 3	BC145797|Ephx3|71932|epoxide hydrolase 3
mm9_v1_chr13_-_94444229_94444287	0.000261931	EOMES.p2	AF257474|Bhmt2|64918|betaine-homocysteine methyltransferase 2	AK090308|Bhmt2|64918|betaine-homocysteine methyltransferase 2	BC013515|Bhmt2|64918|betaine-homocysteine methyltransferase 2	AK145901|Bhmt2|64918|betaine-homocysteine methyltransferase 2	NM_022884|Bhmt2|64918|betaine-homocysteine methyltransferase 2
mm9_v1_chr10_+_127848744_127848813	0.000221994	EOMES.p2	AK031657|Rnf41|67588|ring finger protein 41	AK034551|Rnf41|67588|ring finger protein 41	AK044103|Rnf41|67588|ring finger protein 41	AK032848|Rnf41|67588|ring finger protein 41	AK028551|Rnf41|67588|ring finger protein 41	AK077466|Rnf41|67588|ring finger protein 41
mm9_v1_chr10_-_128356215_128356352	0.000210246	EOMES.p2	AF013288|Rdh5|19682|retinol dehydrogenase 5	BC021372|Rdh5|19682|retinol dehydrogenase 5	AF033196|Rdh5|19682|retinol dehydrogenase 5	AK033063|Rdh5|19682|retinol dehydrogenase 5	AK135139|Rdh5|19682|retinol dehydrogenase 5	NM_134006|Rdh5|19682|retinol dehydrogenase 5
mm9_v1_chr19_+_22767272_22767282	0.000166557	EOMES.p2	AK053673|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK046908|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK077331|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK082141|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK142504|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK161909|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK163890|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr14_+_58445584_58445682	9.91666e-05	EOMES.p2	AK212819|Mrp63|67840|mitochondrial ribosomal protein 63
