mm9_v1_chr16_-_44558929_44559002	5.73346	FOXD3.p2	BC078631|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	BC062892|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK028889|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	NM_172506|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK043379|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK028770|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm9_v1_chr9_-_96378951_96379045	5.14558	FOXD3.p2	AK007588|Rnf7|19823|ring finger protein 7	BC011127|Rnf7|19823|ring finger protein 7	AK002628|Rnf7|19823|ring finger protein 7	AK003248|Rnf7|19823|ring finger protein 7	AK003963|Rnf7|19823|ring finger protein 7	AK011328|Rnf7|19823|ring finger protein 7	AK146030|Rnf7|19823|ring finger protein 7	NM_011279|Rnf7|19823|ring finger protein 7	AF092877|Rnf7|19823|ring finger protein 7
mm9_v1_chr1_-_42749940_42749978	3.54069	FOXD3.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chrX_+_34335642_34335646	3.43212	FOXD3.p2	U27316|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK003467|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	NM_007451|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr1_+_168184269_168184413	3.23394	FOXD3.p2	NM_001164528|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024494|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024495|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024496|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024497|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024498|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024499|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024500|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024501|Ildr2|100039795|immunoglobulin-like domain containing receptor 2
mm9_v1_chr7_+_74792295_74792398	3.19955	FOXD3.p2	AK086049|Ttc23|67009|tetratricopeptide repeat domain 23	AK165626|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168475|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168476|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168477|Ttc23|67009|tetratricopeptide repeat domain 23	NM_025905|Ttc23|67009|tetratricopeptide repeat domain 23	AK141754|Ttc23|67009|tetratricopeptide repeat domain 23	BC038179|Ttc23|67009|tetratricopeptide repeat domain 23	AK005431|Ttc23|67009|tetratricopeptide repeat domain 23	AK084269|Ttc23|67009|tetratricopeptide repeat domain 23	AK166555|Ttc23|67009|tetratricopeptide repeat domain 23	AK166613|Ttc23|67009|tetratricopeptide repeat domain 23
mm9_v1_chr13_+_14705508_14705551	2.8316	FOXD3.p2	AK136115|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	NM_008944|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK151883|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK152862|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK167752|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012990|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK035578|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK154011|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012119|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	BC026768|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AF099733|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2
mm9_v1_chr6_+_134879160_134879183	2.66438	FOXD3.p2	AK012387|1190002F15Rik|381822|RIKEN cDNA 1190002F15 gene
mm9_v1_chr16_+_72663393_72663448	2.38624	FOXD3.p2	AK138485|Robo1|19876|roundabout homolog 1 (Drosophila)	AK143001|Robo1|19876|roundabout homolog 1 (Drosophila)	NM_019413|Robo1|19876|roundabout homolog 1 (Drosophila)	AK032752|Robo1|19876|roundabout homolog 1 (Drosophila)	AK142047|Robo1|19876|roundabout homolog 1 (Drosophila)
mm9_v1_chr7_+_135047561_135047646	2.35668	FOXD3.p2	NM_009739|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150607|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150723|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK167519|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK145479|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	BC046595|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr5_+_30969259_30969346	2.27581	FOXD3.p2	AF012709|Cenpa|12615|centromere protein A	NM_007681|Cenpa|12615|centromere protein A	AK040313|Cenpa|12615|centromere protein A	AK041138|Cenpa|12615|centromere protein A	AK089033|Cenpa|12615|centromere protein A	AK053763|Cenpa|12615|centromere protein A	AK010718|Cenpa|12615|centromere protein A	BC011038|Cenpa|12615|centromere protein A	AK011399|Cenpa|12615|centromere protein A	BC012280|Cenpa|12615|centromere protein A
mm9_v1_chr19_-_44210311_44210378	2.03607	FOXD3.p2	BC037640|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	BC027553|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	AK012163|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	AK139654|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	NM_001081077|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)
mm9_v1_chr13_+_51942043_51942063	2.02564	FOXD3.p2	NM_011817|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AK002237|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AK007410|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AB021884|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	BC001989|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AF055638|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma
mm9_v1_chr7_+_73205454_73205492	1.99706	FOXD3.p2	BC013777|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	BC029642|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AF230356|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'
mm9_v1_chr15_-_82074765_82074852	1.91111	FOXD3.p2	NM_001080158|Cenpm|66570|centromere protein M
mm9_v1_chr19_-_60302398_60302548	1.88109	FOXD3.p2	BC061459|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK162079|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed
mm9_v1_chr1_+_45368443_45368526	1.76827	FOXD3.p2	AK220558|Col3a1|12825|collagen, type III, alpha 1	AK013329|Col3a1|12825|collagen, type III, alpha 1	AK041115|Col3a1|12825|collagen, type III, alpha 1	AK048546|Col3a1|12825|collagen, type III, alpha 1	AK157762|Col3a1|12825|collagen, type III, alpha 1	AK159763|Col3a1|12825|collagen, type III, alpha 1	AK159920|Col3a1|12825|collagen, type III, alpha 1	AK160048|Col3a1|12825|collagen, type III, alpha 1	AK160107|Col3a1|12825|collagen, type III, alpha 1	AK160818|Col3a1|12825|collagen, type III, alpha 1	AK147542|Col3a1|12825|collagen, type III, alpha 1	AK159985|Col3a1|12825|collagen, type III, alpha 1	AK029212|Col3a1|12825|collagen, type III, alpha 1	BC052398|Col3a1|12825|collagen, type III, alpha 1	BC043089|Col3a1|12825|collagen, type III, alpha 1	AK031544|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr9_-_43921555_43921605	1.75389	FOXD3.p2	BC111036|Rnf26|213211|ring finger protein 26	AK157821|Rnf26|213211|ring finger protein 26	AK085078|Rnf26|213211|ring finger protein 26	AK033164|Rnf26|213211|ring finger protein 26
mm9_v1_chr10_+_127759640_127759648	1.71925	FOXD3.p2	AK013014|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK019927|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr12_+_3891743_3891823	1.66588	FOXD3.p2	AF480164|Dnmt3a|13435|DNA methyltransferase 3A	NM_153743|Dnmt3a|13435|DNA methyltransferase 3A	AK157792|Dnmt3a|13435|DNA methyltransferase 3A	AK077792|Dnmt3a|13435|DNA methyltransferase 3A	AK136170|Dnmt3a|13435|DNA methyltransferase 3A
mm9_v1_chrX_-_104035877_104035981	1.6202	FOXD3.p2	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr11_+_93905443_93905464	1.614	FOXD3.p2	AK147537|Spag9|70834|sperm associated antigen 9	AK147431|Spag9|70834|sperm associated antigen 9
mm9_v1_chr19_-_30623890_30624012	1.60627	FOXD3.p2	AF030433|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	BC050189|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	NM_010051|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	AK141693|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	AK144119|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)
mm9_v1_chr6_+_146991282_146991325	1.59781	FOXD3.p2	AK077677|Mrps35|232536|mitochondrial ribosomal protein S35	NM_145573|Mrps35|232536|mitochondrial ribosomal protein S35	AK170480|Mrps35|232536|mitochondrial ribosomal protein S35	BC019964|Mrps35|232536|mitochondrial ribosomal protein S35
mm9_v1_chr12_+_82049290_82049329	1.56133	FOXD3.p2	AK135336|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr11_-_40508405_40508442	1.54797	FOXD3.p2	AK075600|Mat2b|108645|methionine adenosyltransferase II, beta	AK075947|Mat2b|108645|methionine adenosyltransferase II, beta	AK162087|Mat2b|108645|methionine adenosyltransferase II, beta
mm9_v1_chr2_+_152561983_152562076	1.54722	FOXD3.p2	M31885|Id1|15901|inhibitor of DNA binding 1	AK008264|Id1|15901|inhibitor of DNA binding 1	BC025073|Id1|15901|inhibitor of DNA binding 1	NM_010495|Id1|15901|inhibitor of DNA binding 1	U43884|Id1|15901|inhibitor of DNA binding 1	AB221668|Id1|15901|inhibitor of DNA binding 1	CT010243|Id1|15901|inhibitor of DNA binding 1
mm9_v1_chr2_-_109118405_109118446	1.52835	FOXD3.p2	BC115926|Mett5d1|76894|methyltransferase 5 domain containing 1	BC117549|Mett5d1|76894|methyltransferase 5 domain containing 1	BC106186|Mett5d1|76894|methyltransferase 5 domain containing 1	BC089533|Mett5d1|76894|methyltransferase 5 domain containing 1	AK002682|Mett5d1|76894|methyltransferase 5 domain containing 1	NM_029790|Mett5d1|76894|methyltransferase 5 domain containing 1
mm9_v1_chr14_+_70945119_70945160	1.52234	FOXD3.p2	AK012301|Reep4|72549|receptor accessory protein 4
mm9_v1_chr15_+_83393975_83394050	1.4754	FOXD3.p2	NM_009775|Tspo|12257|translocator protein	AK151824|Tspo|12257|translocator protein	AK153273|Tspo|12257|translocator protein	AK165822|Tspo|12257|translocator protein	AK166125|Tspo|12257|translocator protein	AK151569|Tspo|12257|translocator protein	AK156489|Tspo|12257|translocator protein	AK172384|Tspo|12257|translocator protein	AK149743|Tspo|12257|translocator protein	AK151421|Tspo|12257|translocator protein	AK152860|Tspo|12257|translocator protein	AK153159|Tspo|12257|translocator protein	AK165450|Tspo|12257|translocator protein	AK150516|Tspo|12257|translocator protein	AK152082|Tspo|12257|translocator protein	AK152827|Tspo|12257|translocator protein	BC002055|Tspo|12257|translocator protein	D21207|Tspo|12257|translocator protein
mm9_v1_chr6_-_88396477_88396541	1.46078	FOXD3.p2	AF268871|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AF283518|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	BC099675|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK147924|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	BC024915|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK171885|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK028424|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK087501|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	NM_023060|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific
mm9_v1_chr4_+_140257340_140257464	1.43559	FOXD3.p2	NM_173867|Rcc2|108911|regulator of chromosome condensation 2	BC060624|Rcc2|108911|regulator of chromosome condensation 2	AK076040|Rcc2|108911|regulator of chromosome condensation 2	BC086666|Rcc2|108911|regulator of chromosome condensation 2
mm9_v1_chr7_+_73205419_73205451	1.42129	FOXD3.p2	AK005256|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK151800|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK153502|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK152546|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK088438|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'
mm9_v1_chr18_-_77953224_77953235	1.41762	FOXD3.p2	AK139552|8030462N17Rik|212163|RIKEN cDNA 8030462N17 gene
mm9_v1_chr6_+_115494665_115494729	1.39529	FOXD3.p2	BC061473|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	NM_199033|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	AK044190|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	AK134697|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)
mm9_v1_chr6_+_134879109_134879150	1.3946	FOXD3.p2	AK004447|1190002F15Rik|381822|RIKEN cDNA 1190002F15 gene
mm9_v1_chrX_+_108009728_108009803	1.36761	FOXD3.p2	BC138657|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC145919|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC052012|Pou3f4|18994|POU domain, class 3, transcription factor 4	X66603|Pou3f4|18994|POU domain, class 3, transcription factor 4	AK158302|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC086670|Pou3f4|18994|POU domain, class 3, transcription factor 4	NM_008901|Pou3f4|18994|POU domain, class 3, transcription factor 4
mm9_v1_chr9_-_71743854_71743929	1.35657	FOXD3.p2	AK135376|Tcf12|21406|transcription factor 12	AK132002|Tcf12|21406|transcription factor 12	AK133958|Tcf12|21406|transcription factor 12	AK078415|Tcf12|21406|transcription factor 12
mm9_v1_chr11_+_102110161_102110288	1.32075	FOXD3.p2	NM_153544|BC030867|217216|cDNA sequence BC030867	AK029811|BC030867|217216|cDNA sequence BC030867	BC030867|BC030867|217216|cDNA sequence BC030867	BC108338|BC030867|217216|cDNA sequence BC030867	BC085317|BC030867|217216|cDNA sequence BC030867
mm9_v1_chr11_+_75578548_75578573	1.31863	FOXD3.p2	AK204716|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK199717|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr7_+_52471161_52471287	1.30777	FOXD3.p2	AK144857|Tead2|21677|TEA domain family member 2	AK146595|Tead2|21677|TEA domain family member 2	AK132009|Tead2|21677|TEA domain family member 2	Y10026|Tead2|21677|TEA domain family member 2	AK137064|Tead2|21677|TEA domain family member 2	AK143155|Tead2|21677|TEA domain family member 2
mm9_v1_chr8_+_3567980_3567997	1.27368	FOXD3.p2	AK168456|C330021F23Rik|546049|RIKEN cDNA C330021F23 gene	AK011562|C330021F23Rik|546049|RIKEN cDNA C330021F23 gene	AK049309|C330021F23Rik|546049|RIKEN cDNA C330021F23 gene	NM_001024728|C330021F23Rik|546049|RIKEN cDNA C330021F23 gene
mm9_v1_chr1_+_72353980_72354076	1.27289	FOXD3.p2	AK081633|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	NM_009533|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK089944|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK165470|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK084263|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	BC051660|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5
mm9_v1_chr5_-_138596915_138596971	1.25149	FOXD3.p2	BC052453|Zfp113|56314|zinc finger protein 113	BC054525|Zfp113|56314|zinc finger protein 113	BC056991|Zfp113|56314|zinc finger protein 113	AF167320|Zfp113|56314|zinc finger protein 113	AK076349|Zfp113|56314|zinc finger protein 113	AK220556|Zfp113|56314|zinc finger protein 113	NM_019747|Zfp113|56314|zinc finger protein 113
mm9_v1_chr9_-_21767872_21768019	1.23337	FOXD3.p2	BC003953|Epor|13857|erythropoietin receptor	J04843|Epor|13857|erythropoietin receptor	AK139031|Epor|13857|erythropoietin receptor	BC046282|Epor|13857|erythropoietin receptor	NM_010149|Epor|13857|erythropoietin receptor
mm9_v1_chr14_-_48037815_48037862	1.23176	FOXD3.p2	BC058087|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	BC027273|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK129032|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK147955|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK048470|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK085882|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5
mm9_v1_chr1_-_55044032_55044295	1.22306	FOXD3.p2	AK077993|Sf3b1|81898|splicing factor 3b, subunit 1	AK087700|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr17_-_26232411_26232456	1.19576	FOXD3.p2	AF153451|Nme4|56520|non-metastatic cells 4, protein expressed in	NM_019731|Nme4|56520|non-metastatic cells 4, protein expressed in	AK011573|Nme4|56520|non-metastatic cells 4, protein expressed in	AK017724|Nme4|56520|non-metastatic cells 4, protein expressed in	AF288690|Nme4|56520|non-metastatic cells 4, protein expressed in	BC027277|Nme4|56520|non-metastatic cells 4, protein expressed in	AK012805|Nme4|56520|non-metastatic cells 4, protein expressed in
mm9_v1_chr5_+_124199713_124199760	1.18843	FOXD3.p2	NM_001042421|Kntc1|208628|kinetochore associated 1	AK172905|Kntc1|208628|kinetochore associated 1
mm9_v1_chr15_-_82075137_82075176	1.18328	FOXD3.p2	AY243536|Cenpm|66570|centromere protein M	AY243537|Cenpm|66570|centromere protein M	AK011191|Cenpm|66570|centromere protein M	BC009160|Cenpm|66570|centromere protein M	AK168203|Cenpm|66570|centromere protein M	AK011227|Cenpm|66570|centromere protein M	AK011793|Cenpm|66570|centromere protein M	AK011755|Cenpm|66570|centromere protein M	AK010885|Cenpm|66570|centromere protein M	AK017679|Cenpm|66570|centromere protein M	AK011464|Cenpm|66570|centromere protein M	NM_025639|Cenpm|66570|centromere protein M	NM_178269|Cenpm|66570|centromere protein M
mm9_v1_chr2_-_150835067_150835133	1.17703	FOXD3.p2	AK129253|Ninl|78177|ninein-like	BC067071|Ninl|78177|ninein-like	NM_207204|Ninl|78177|ninein-like
mm9_v1_chr4_+_44313764_44313857	1.16273	FOXD3.p2	AK137000|Melk|17279|maternal embryonic leucine zipper kinase	AK161029|Melk|17279|maternal embryonic leucine zipper kinase	AK011932|Melk|17279|maternal embryonic leucine zipper kinase	NM_010790|Melk|17279|maternal embryonic leucine zipper kinase	AK010498|Melk|17279|maternal embryonic leucine zipper kinase	AK164138|Melk|17279|maternal embryonic leucine zipper kinase	BC055065|Melk|17279|maternal embryonic leucine zipper kinase	AK129076|Melk|17279|maternal embryonic leucine zipper kinase	X95351|Melk|17279|maternal embryonic leucine zipper kinase	AK145021|Melk|17279|maternal embryonic leucine zipper kinase	L76158|Melk|17279|maternal embryonic leucine zipper kinase
mm9_v1_chr6_-_56654667_56654692	1.16244	FOXD3.p2	BC048459|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK008480|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK011218|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC061085|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK009617|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132626|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132628|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_025520|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr10_-_20444654_20444883	1.16005	FOXD3.p2	AF190639|Pde7b|29863|phosphodiesterase 7B	BC130267|Pde7b|29863|phosphodiesterase 7B	AK020137|Pde7b|29863|phosphodiesterase 7B	AK040876|Pde7b|29863|phosphodiesterase 7B	NM_013875|Pde7b|29863|phosphodiesterase 7B	AK035385|Pde7b|29863|phosphodiesterase 7B
mm9_v1_chr5_-_134790277_134790348	1.14194	FOXD3.p2	BC047387|Gtf2i|14886|general transcription factor II I
mm9_v1_chr8_-_113426341_113426387	1.13107	FOXD3.p2	AK140503|Fuk|234730|fucokinase	AK164340|Fuk|234730|fucokinase	AJ297482|Fuk|234730|fucokinase	AJ534942|Fuk|234730|fucokinase	AY223865|Fuk|234730|fucokinase	NM_172283|Fuk|234730|fucokinase	NM_181666|Fuk|234730|fucokinase	AK161763|Fuk|234730|fucokinase
mm9_v1_chr10_+_127759512_127759609	1.12306	FOXD3.p2	AF186115|Cnpy2|56530|canopy 2 homolog (zebrafish)	NM_019953|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK150953|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chrX_+_34335647_34335650	1.11778	FOXD3.p2	AK012751|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK002283|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK017881|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK088730|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	X70847|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr17_-_37095372_37095414	1.11165	FOXD3.p2	AK003714|Znrd1|66136|zinc ribbon domain containing, 1	NM_023162|Znrd1|66136|zinc ribbon domain containing, 1	BC043016|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr16_+_37916538_37916581	1.10687	FOXD3.p2	AK141990|Gpr156|239845|G protein-coupled receptor 156	BC059227|Gpr156|239845|G protein-coupled receptor 156	NM_153394|Gpr156|239845|G protein-coupled receptor 156
mm9_v1_chr3_+_66789621_66789657	1.1066	FOXD3.p2	AK168539|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC038303|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK004742|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK169340|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC027501|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC083123|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr11_-_43239663_43239784	1.09186	FOXD3.p2	NM_001131054|Pttg1|30939|pituitary tumor-transforming gene 1	BC023324|Pttg1|30939|pituitary tumor-transforming gene 1
mm9_v1_chr4_+_134420419_134420535	1.08786	FOXD3.p2	BC145805|Rhd|19746|Rh blood group, D antigen	NM_011270|Rhd|19746|Rh blood group, D antigen	AF057524|Rhd|19746|Rh blood group, D antigen	AK089642|Rhd|19746|Rh blood group, D antigen	AF069311|Rhd|19746|Rh blood group, D antigen	AK079335|Rhd|19746|Rh blood group, D antigen	AK171641|Rhd|19746|Rh blood group, D antigen	AB015189|Rhd|19746|Rh blood group, D antigen	AB015190|Rhd|19746|Rh blood group, D antigen	AF047827|Rhd|19746|Rh blood group, D antigen	AK157850|Rhd|19746|Rh blood group, D antigen	AF012430|Rhd|19746|Rh blood group, D antigen
mm9_v1_chr2_-_50152180_50152256	1.08384	FOXD3.p2	BC002253|Mmadhc|109129|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria	NM_133839|Mmadhc|109129|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
mm9_v1_chr9_-_15084310_15084404	1.06344	FOXD3.p2	BC020185|Med17|234959|mediator complex subunit 17	NM_144933|Med17|234959|mediator complex subunit 17	AK033151|Med17|234959|mediator complex subunit 17	AK142033|Med17|234959|mediator complex subunit 17	AK038451|Med17|234959|mediator complex subunit 17	AK049112|Med17|234959|mediator complex subunit 17	AK151377|Med17|234959|mediator complex subunit 17
mm9_v1_chr4_-_134108044_134108129	1.05955	FOXD3.p2	NM_029100|Sepn1|74777|selenoprotein N, 1
mm9_v1_chr8_-_8667108_8667134	1.05921	FOXD3.p2	AK034581|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr14_+_48092305_48092319	1.05103	FOXD3.p2	AK171630|Fbxo34|78938|F-box protein 34
mm9_v1_chr4_-_116855158_116855228	1.04996	FOXD3.p2	AK150222|Kif2c|73804|kinesin family member 2C	AK088047|Kif2c|73804|kinesin family member 2C	BC006841|Kif2c|73804|kinesin family member 2C	AK015046|Kif2c|73804|kinesin family member 2C	NM_134471|Kif2c|73804|kinesin family member 2C
mm9_v1_chr9_+_62686569_62686663	1.03758	FOXD3.p2	AK154414|Cln6|76524|ceroid-lipofuscinosis, neuronal 6	NM_001033175|Cln6|76524|ceroid-lipofuscinosis, neuronal 6	AK154551|Cln6|76524|ceroid-lipofuscinosis, neuronal 6
mm9_v1_chr9_+_109778051_109778082	1.03619	FOXD3.p2	AK077991|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)	NM_007658|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)
mm9_v1_chr5_+_114580397_114580568	1.01762	FOXD3.p2	BC011039|Ung|22256|uracil DNA glycosylase	NM_001040691|Ung|22256|uracil DNA glycosylase	Y08975|Ung|22256|uracil DNA glycosylase	AK146178|Ung|22256|uracil DNA glycosylase
mm9_v1_chr12_-_13255934_13256032	0.999856	FOXD3.p2	BC008570|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK166146|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK028341|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK053259|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK160982|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	BC010624|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	NM_134040|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK153335|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK132157|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
mm9_v1_chr17_+_5343877_5344040	0.993134	FOXD3.p2	AK049919|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK021005|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK048918|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr8_-_4779533_4779566	0.989945	FOXD3.p2	AF017152|Shcbp1|20419|Shc SH2-domain binding protein 1	NM_011369|Shcbp1|20419|Shc SH2-domain binding protein 1	AK162943|Shcbp1|20419|Shc SH2-domain binding protein 1	AK149580|Shcbp1|20419|Shc SH2-domain binding protein 1	AK137496|Shcbp1|20419|Shc SH2-domain binding protein 1	BC070455|Shcbp1|20419|Shc SH2-domain binding protein 1	AK144966|Shcbp1|20419|Shc SH2-domain binding protein 1	AK052944|Shcbp1|20419|Shc SH2-domain binding protein 1	AK051205|Shcbp1|20419|Shc SH2-domain binding protein 1
mm9_v1_chr9_+_78039786_78039851	0.987713	FOXD3.p2	AK008400|Gsta4|14860|glutathione S-transferase, alpha 4	AK008189|Gsta4|14860|glutathione S-transferase, alpha 4	AK011841|Gsta4|14860|glutathione S-transferase, alpha 4	AK019271|Gsta4|14860|glutathione S-transferase, alpha 4	AK009668|Gsta4|14860|glutathione S-transferase, alpha 4	AK010098|Gsta4|14860|glutathione S-transferase, alpha 4	AK008193|Gsta4|14860|glutathione S-transferase, alpha 4	AK008490|Gsta4|14860|glutathione S-transferase, alpha 4	AK011177|Gsta4|14860|glutathione S-transferase, alpha 4	BC012639|Gsta4|14860|glutathione S-transferase, alpha 4	L06047|Gsta4|14860|glutathione S-transferase, alpha 4
mm9_v1_chr3_-_123088789_123088909	0.987701	FOXD3.p2	AK083169|Mettl14|210529|methyltransferase like 14	AK089949|Mettl14|210529|methyltransferase like 14	AK129409|Mettl14|210529|methyltransferase like 14	BC052204|Mettl14|210529|methyltransferase like 14	AK136652|Mettl14|210529|methyltransferase like 14	AK146881|Mettl14|210529|methyltransferase like 14	AK153810|Mettl14|210529|methyltransferase like 14	NM_201638|Mettl14|210529|methyltransferase like 14
mm9_v1_chr14_-_48037874_48037887	0.962132	FOXD3.p2	AK164575|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK036384|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK135820|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5
mm9_v1_chr19_+_55816320_55816547	0.94503	FOXD3.p2	AK132465|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AK035059|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AF107298|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr18_-_78006491_78006518	0.941307	FOXD3.p2	AK076912|Haus1|225745|HAUS augmin-like complex, subunit 1	AK146923|Haus1|225745|HAUS augmin-like complex, subunit 1	BC024400|Haus1|225745|HAUS augmin-like complex, subunit 1	NM_146089|Haus1|225745|HAUS augmin-like complex, subunit 1
mm9_v1_chr18_+_23910833_23910892	0.940999	FOXD3.p2	AK158570|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	NM_001162942|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK168834|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr12_-_81213930_81214002	0.935624	FOXD3.p2	M58566|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	BC037998|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	BC016621|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK077855|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK021295|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK036950|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK051035|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	NM_007564|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1
mm9_v1_chr6_-_38249209_38249350	0.934082	FOXD3.p2	AK084475|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK045287|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK051064|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	NM_172467|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138180|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138181|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr2_-_165213726_165213791	0.933381	FOXD3.p2	BC040388|Zfp334|228876|zinc finger protein 334	NM_178411|Zfp334|228876|zinc finger protein 334
mm9_v1_chr11_+_87895626_87895848	0.931774	FOXD3.p2	AK079148|Vezf1|22344|vascular endothelial zinc finger 1	AK018086|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr12_-_102321835_102321908	0.92708	FOXD3.p2	AK051239|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK031629|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK156272|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK152480|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm9_v1_chr9_+_44142772_44142803	0.917265	FOXD3.p2	AK088040|H2afx|15270|H2A histone family, member X	AK008124|H2afx|15270|H2A histone family, member X	X58069|H2afx|15270|H2A histone family, member X	BC010336|H2afx|15270|H2A histone family, member X	NM_010436|H2afx|15270|H2A histone family, member X	BC005468|H2afx|15270|H2A histone family, member X
mm9_v1_chr6_+_100783598_100783865	0.912859	FOXD3.p2	BC110429|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK082539|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	NM_182939|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK084169|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC112399|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC056340|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC098464|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2
mm9_v1_chr13_-_22133203_22133232	0.906611	FOXD3.p2	BC052219|Hist1h4i|319158|histone cluster 1, H4i	BC125598|Hist1h4i|319158|histone cluster 1, H4i	BC125600|Hist1h4i|319158|histone cluster 1, H4i	BC019757|Hist1h4i|319158|histone cluster 1, H4i	BC092144|Hist1h4i|319158|histone cluster 1, H4i	NM_175656|Hist1h4i|319158|histone cluster 1, H4i	AK011560|Hist1h4i|319158|histone cluster 1, H4i
mm9_v1_chr1_+_174078145_174078245	0.902967	FOXD3.p2	NM_153555|Dcaf8|98193|DDB1 and CUL4 associated factor 8	BC023704|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK146825|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK164799|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK047316|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chr3_+_134875526_134875622	0.902897	FOXD3.p2	AK133445|Cenpe|229841|centromere protein E	NM_173762|Cenpe|229841|centromere protein E	BC080703|Cenpe|229841|centromere protein E	BC052843|Cenpe|229841|centromere protein E	BC039755|Cenpe|229841|centromere protein E	BC106096|Cenpe|229841|centromere protein E	AY493378|Cenpe|229841|centromere protein E
mm9_v1_chr3_+_133899454_133899460	0.897252	FOXD3.p2	BC065149|Cxxc4|319478|CXXC finger 4
mm9_v1_chr9_-_21564742_21564759	0.894572	FOXD3.p2	AK153185|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK011728|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK167877|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chr1_-_191994557_191994590	0.883401	FOXD3.p2	BC051411|Prox1|19130|prospero-related homeobox 1	NM_008937|Prox1|19130|prospero-related homeobox 1	AK052889|Prox1|19130|prospero-related homeobox 1
mm9_v1_chr9_-_21564723_21564737	0.882758	FOXD3.p2	AK031680|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK075950|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC116238|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC116239|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_026282|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC086683|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC056965|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC098472|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chr4_+_140258090_140258179	0.881595	FOXD3.p2	AK186216|Rcc2|108911|regulator of chromosome condensation 2	AK129370|Rcc2|108911|regulator of chromosome condensation 2
mm9_v1_chr11_+_93905557_93905590	0.881221	FOXD3.p2	BC052058|Spag9|70834|sperm associated antigen 9	BC060100|Spag9|70834|sperm associated antigen 9	BC094670|Spag9|70834|sperm associated antigen 9
mm9_v1_chr11_-_104411728_104411933	0.876591	FOXD3.p2	AK039377|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK148278|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC023187|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK161471|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC157955|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172100|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172149|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	NM_145436|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)
mm9_v1_chr2_-_120389527_120389553	0.858601	FOXD3.p2	BC025424|Zfp106|20402|zinc finger protein 106
mm9_v1_chr17_+_36131397_36131470	0.857993	FOXD3.p2	AK078380|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK020860|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK142942|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	BC055918|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene
mm9_v1_chr5_+_38651466_38651637	0.857807	FOXD3.p2	BC025197|Tmem128|66309|transmembrane protein 128	AK012789|Tmem128|66309|transmembrane protein 128	AK013227|Tmem128|66309|transmembrane protein 128	AK080853|Tmem128|66309|transmembrane protein 128	NM_025480|Tmem128|66309|transmembrane protein 128	AK162257|Tmem128|66309|transmembrane protein 128	AK076679|Tmem128|66309|transmembrane protein 128	BC060969|Tmem128|66309|transmembrane protein 128	BC110310|Tmem128|66309|transmembrane protein 128
mm9_v1_chr6_-_97010364_97010406	0.856995	FOXD3.p2	BC089490|Fam19a4|320701|family with sequence similarity 19, member A4	AK081531|Fam19a4|320701|family with sequence similarity 19, member A4	AK084114|Fam19a4|320701|family with sequence similarity 19, member A4	NM_177233|Fam19a4|320701|family with sequence similarity 19, member A4	AK149355|Fam19a4|320701|family with sequence similarity 19, member A4
mm9_v1_chr1_-_88253690_88253764	0.8495	FOXD3.p2	AK050958|Ncl|17975|nucleolin
mm9_v1_chr11_+_79902901_79902965	0.846649	FOXD3.p2	NM_001029856|Atad5|237877|ATPase family, AAA domain containing 5	BC038279|Atad5|237877|ATPase family, AAA domain containing 5	AK053857|Atad5|237877|ATPase family, AAA domain containing 5	AK085211|Atad5|237877|ATPase family, AAA domain containing 5	AY557610|Atad5|237877|ATPase family, AAA domain containing 5	AK165945|Atad5|237877|ATPase family, AAA domain containing 5	AK048355|Atad5|237877|ATPase family, AAA domain containing 5	AK032814|Atad5|237877|ATPase family, AAA domain containing 5
mm9_v1_chr11_-_34647110_34647142	0.84643	FOXD3.p2	AK011138|Ccdc99|70385|coiled-coil domain containing 99	BC006674|Ccdc99|70385|coiled-coil domain containing 99	AK012927|Ccdc99|70385|coiled-coil domain containing 99	NM_027411|Ccdc99|70385|coiled-coil domain containing 99
mm9_v1_chr1_+_182499015_182499087	0.829123	FOXD3.p2	AK135977|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK159433|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK166104|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	X14206|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK028042|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK146677|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK165158|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK169326|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK152360|Parp1|11545|poly (ADP-ribose) polymerase family, member 1
mm9_v1_chr19_-_58529766_58529841	0.823692	FOXD3.p2	BC044783|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	AK076171|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1
mm9_v1_chr4_-_140695648_140695720	0.821917	FOXD3.p2	BC066992|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171420|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK027934|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK145912|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171702|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_001025608|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_174996|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed
mm9_v1_chr1_+_182499091_182499136	0.816499	FOXD3.p2	AK030889|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK088679|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	BC012041|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	NM_007415|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK167699|Parp1|11545|poly (ADP-ribose) polymerase family, member 1
mm9_v1_chr1_-_58561631_58561830	0.813822	FOXD3.p2	BC015257|Orc2|18393|origin recognition complex, subunit 2	NM_008765|Orc2|18393|origin recognition complex, subunit 2	U27457|Orc2|18393|origin recognition complex, subunit 2	AK048408|Orc2|18393|origin recognition complex, subunit 2	AK133604|Orc2|18393|origin recognition complex, subunit 2	AK146281|Orc2|18393|origin recognition complex, subunit 2	AK146859|Orc2|18393|origin recognition complex, subunit 2	AK051747|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr13_+_23622912_23622975	0.807612	FOXD3.p2	NM_153173|Hist1h4h|69386|histone cluster 1, H4h	AK007642|Hist1h4h|69386|histone cluster 1, H4h	BC087952|Hist1h4h|69386|histone cluster 1, H4h	BC028550|Hist1h4h|69386|histone cluster 1, H4h	BC058529|Hist1h4h|69386|histone cluster 1, H4h
mm9_v1_chr8_+_109127245_109127278	0.806443	FOXD3.p2	AK076369|Cdh1|12550|cadherin 1	AK166267|Cdh1|12550|cadherin 1	NM_009864|Cdh1|12550|cadherin 1	BC098501|Cdh1|12550|cadherin 1
mm9_v1_chr5_+_145016060_145016213	0.805604	FOXD3.p2	AK049027|Bri3|55950|brain protein I3	NM_018772|Bri3|55950|brain protein I3	AK080467|Bri3|55950|brain protein I3	BC005677|Bri3|55950|brain protein I3	BC095955|Bri3|55950|brain protein I3	BC021149|Bri3|55950|brain protein I3	AF106967|Bri3|55950|brain protein I3
mm9_v1_chr17_+_37006518_37006546	0.803401	FOXD3.p2	NM_011280|Trim10|19824|tripartite motif-containing 10	AK011082|Trim10|19824|tripartite motif-containing 10	AF134811|Trim10|19824|tripartite motif-containing 10	BC051632|Trim10|19824|tripartite motif-containing 10	AF220121|Trim10|19824|tripartite motif-containing 10
mm9_v1_chr11_+_96650437_96650562	0.801885	FOXD3.p2	AK157710|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)	NM_007622|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)	AK014215|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)	BC055290|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)	AK017608|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)
mm9_v1_chr4_-_11249207_11249316	0.801744	FOXD3.p2	AK165377|Dpy19l4|381510|dpy-19-like 4 (C. elegans)	AK144417|Dpy19l4|381510|dpy-19-like 4 (C. elegans)	BC147500|Dpy19l4|381510|dpy-19-like 4 (C. elegans)	BC157932|Dpy19l4|381510|dpy-19-like 4 (C. elegans)	BC157988|Dpy19l4|381510|dpy-19-like 4 (C. elegans)	NM_001081201|Dpy19l4|381510|dpy-19-like 4 (C. elegans)	AK172656|Dpy19l4|381510|dpy-19-like 4 (C. elegans)
mm9_v1_chr10_+_96942181_96942256	0.799678	FOXD3.p2	X53929|Dcn|13179|decorin	AK135287|Dcn|13179|decorin	AK145905|Dcn|13179|decorin	AK161788|Dcn|13179|decorin	AK165408|Dcn|13179|decorin
mm9_v1_chr2_-_75819804_75820023	0.788472	FOXD3.p2	BC004773|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK045096|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK029535|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK019670|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	NM_030188|Ttc30a1|78802|tetratricopeptide repeat domain 30A1
mm9_v1_chr1_-_140739020_140739033	0.780819	FOXD3.p2	AK031478|Lhx9|16876|LIM homeobox protein 9	NM_001025565|Lhx9|16876|LIM homeobox protein 9	NM_001042577|Lhx9|16876|LIM homeobox protein 9	BC072623|Lhx9|16876|LIM homeobox protein 9
mm9_v1_chr12_-_88813216_88813284	0.779959	FOXD3.p2	AK167695|Snw1|66354|SNW domain containing 1	AX775977|Snw1|66354|SNW domain containing 1	AX775979|Snw1|66354|SNW domain containing 1	AK166163|Snw1|66354|SNW domain containing 1	NM_025507|Snw1|66354|SNW domain containing 1
mm9_v1_chr6_+_51494591_51494699	0.778394	FOXD3.p2	AK152004|Snx10|71982|sorting nexin 10
mm9_v1_chr10_-_126467848_126467902	0.775955	FOXD3.p2	BC034286|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK020437|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK169164|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK018591|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK141183|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK012240|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK171656|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK172112|Tsfm|66399|Ts translation elongation factor, mitochondrial	BC057904|Tsfm|66399|Ts translation elongation factor, mitochondrial	NM_025537|Tsfm|66399|Ts translation elongation factor, mitochondrial
mm9_v1_chr6_+_34659440_34659540	0.772107	FOXD3.p2	NM_145575|Cald1|109624|caldesmon 1	BC019435|Cald1|109624|caldesmon 1	AK014755|Cald1|109624|caldesmon 1	AK160593|Cald1|109624|caldesmon 1
mm9_v1_chr10_-_36855292_36855411	0.769421	FOXD3.p2	AK082623|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK136452|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr10_+_96942263_96942299	0.76895	FOXD3.p2	AK052759|Dcn|13179|decorin	AK035609|Dcn|13179|decorin
mm9_v1_chr5_-_52957343_52957374	0.768808	FOXD3.p2	AY841361|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr13_-_60278723_60278734	0.760449	FOXD3.p2	X65128|Gas1|14451|growth arrest specific 1
mm9_v1_chr17_+_40948047_40948124	0.75866	FOXD3.p2	AK157847|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF057526|Rhag|19743|Rhesus blood group-associated A glycoprotein	AK143851|Rhag|19743|Rhesus blood group-associated A glycoprotein	NM_011269|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101941|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101942|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103512|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103662|Rhag|19743|Rhesus blood group-associated A glycoprotein	AB015192|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF065395|Rhag|19743|Rhesus blood group-associated A glycoprotein
mm9_v1_chr10_-_12912880_12912990	0.758437	FOXD3.p2	AK011491|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC069962|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC067062|Ltv1|353258|LTV1 homolog (S. cerevisiae)	NM_181470|Ltv1|353258|LTV1 homolog (S. cerevisiae)
mm9_v1_chr2_+_92025639_92025639	0.757843	FOXD3.p2	AK037174|Phf21a|192285|PHD finger protein 21A	NM_001109691|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr7_+_52471122_52471152	0.750379	FOXD3.p2	D50563|Tead2|21677|TEA domain family member 2	NM_011565|Tead2|21677|TEA domain family member 2
mm9_v1_chrX_+_137909951_137910122	0.748541	FOXD3.p2	AK133179|Col4a5|12830|collagen, type IV, alpha 5	NM_001163155|Col4a5|12830|collagen, type IV, alpha 5	NM_007736|Col4a5|12830|collagen, type IV, alpha 5	AB041350|Col4a5|12830|collagen, type IV, alpha 5	BC082788|Col4a5|12830|collagen, type IV, alpha 5
mm9_v1_chr3_+_145541951_145541971	0.744525	FOXD3.p2	
mm9_v1_chr1_-_134638287_134638341	0.744497	FOXD3.p2	AK138636|Nfasc|269116|neurofascin	AJ543322|Nfasc|269116|neurofascin
mm9_v1_chr14_+_27852148_27852279	0.741736	FOXD3.p2	AF494210|Il17rd|171463|interleukin 17 receptor D	NM_134437|Il17rd|171463|interleukin 17 receptor D	BC138629|Il17rd|171463|interleukin 17 receptor D	BC066804|Il17rd|171463|interleukin 17 receptor D	AF459444|Il17rd|171463|interleukin 17 receptor D
mm9_v1_chr15_+_101858606_101858684	0.741584	FOXD3.p2	NM_010664|Krt18|16668|keratin 18	M11686|Krt18|16668|keratin 18	AK167469|Krt18|16668|keratin 18	AK145413|Krt18|16668|keratin 18	AK167072|Krt18|16668|keratin 18	AK167676|Krt18|16668|keratin 18	AK167432|Krt18|16668|keratin 18	AK167265|Krt18|16668|keratin 18	M36376|Krt18|16668|keratin 18	BC020474|Krt18|16668|keratin 18	BC089022|Krt18|16668|keratin 18
mm9_v1_chrX_+_162782484_162782852	0.740722	FOXD3.p2	NM_001177955|Gpm6b|14758|glycoprotein m6b	NM_001177956|Gpm6b|14758|glycoprotein m6b	NM_001177957|Gpm6b|14758|glycoprotein m6b	NM_001177958|Gpm6b|14758|glycoprotein m6b	NM_001177959|Gpm6b|14758|glycoprotein m6b	NM_001177960|Gpm6b|14758|glycoprotein m6b	AF254869|Gpm6b|14758|glycoprotein m6b	AF254870|Gpm6b|14758|glycoprotein m6b	AF254872|Gpm6b|14758|glycoprotein m6b	AF254873|Gpm6b|14758|glycoprotein m6b	AF254874|Gpm6b|14758|glycoprotein m6b	AF254875|Gpm6b|14758|glycoprotein m6b	AF254878|Gpm6b|14758|glycoprotein m6b	AF254879|Gpm6b|14758|glycoprotein m6b	AK013660|Gpm6b|14758|glycoprotein m6b	AK140714|Gpm6b|14758|glycoprotein m6b	S65737|Gpm6b|14758|glycoprotein m6b
mm9_v1_chr14_-_65059694_65059876	0.740047	FOXD3.p2	AK002356|Msra|110265|methionine sulfoxide reductase A	AK009822|Msra|110265|methionine sulfoxide reductase A	AK030278|Msra|110265|methionine sulfoxide reductase A	BC014738|Msra|110265|methionine sulfoxide reductase A	AK049714|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr5_+_135058559_135058657	0.738142	FOXD3.p2	NM_020022|Rfc2|19718|replication factor C (activator 1) 2	BC099370|Rfc2|19718|replication factor C (activator 1) 2	AK154681|Rfc2|19718|replication factor C (activator 1) 2	BC023028|Rfc2|19718|replication factor C (activator 1) 2	AK011649|Rfc2|19718|replication factor C (activator 1) 2	AK011353|Rfc2|19718|replication factor C (activator 1) 2	AK075997|Rfc2|19718|replication factor C (activator 1) 2
mm9_v1_chr5_-_21290971_21291070	0.736516	FOXD3.p2	AK013295|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	D63784|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	NM_009584|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	BC021755|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK167991|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK131964|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK161376|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK162409|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK136951|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	BC052027|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK169850|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2
mm9_v1_chr19_-_4906607_4906628	0.727441	FOXD3.p2	AK037753|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	BC076577|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK161343|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK045850|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK168901|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	NM_001033128|Bbs1|52028|Bardet-Biedl syndrome 1 (human)
mm9_v1_chr7_-_53965879_53966065	0.726649	FOXD3.p2	BC019985|Saal1|78935|serum amyloid A-like 1	BC068127|Saal1|78935|serum amyloid A-like 1	AK019878|Saal1|78935|serum amyloid A-like 1	AK132193|Saal1|78935|serum amyloid A-like 1	NM_030233|Saal1|78935|serum amyloid A-like 1	AK030833|Saal1|78935|serum amyloid A-like 1	AK134418|Saal1|78935|serum amyloid A-like 1	AK033202|Saal1|78935|serum amyloid A-like 1	AK035874|Saal1|78935|serum amyloid A-like 1	BC087944|Saal1|78935|serum amyloid A-like 1
mm9_v1_chr1_-_72258684_72258880	0.720202	FOXD3.p2	AY628210|Mreg|381269|melanoregulin	BC068125|Mreg|381269|melanoregulin	NM_001005423|Mreg|381269|melanoregulin
mm9_v1_chr7_+_111367306_111367377	0.719773	FOXD3.p2	AK040000|Trim6|94088|tripartite motif-containing 6	NM_001013616|Trim6|94088|tripartite motif-containing 6	AK021253|Trim6|94088|tripartite motif-containing 6	AK033396|Trim6|94088|tripartite motif-containing 6	AK049238|Trim6|94088|tripartite motif-containing 6	BC138965|Trim6|94088|tripartite motif-containing 6
mm9_v1_chrX_-_103680566_103680612	0.71959	FOXD3.p2	BC085176|Fndc3c1|333564|fibronectin type III domain containing 3C1	BC076625|Fndc3c1|333564|fibronectin type III domain containing 3C1	NM_001007580|Fndc3c1|333564|fibronectin type III domain containing 3C1	DQ192038|Fndc3c1|333564|fibronectin type III domain containing 3C1
mm9_v1_chr14_-_66452720_66452805	0.713265	FOXD3.p2	BC033303|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	BC071275|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	AK166457|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	AK050845|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	AK144685|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	NM_028039|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)
mm9_v1_chr4_-_15872497_15872653	0.712349	FOXD3.p2	CT010405|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK010473|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK004725|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK168490|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK015692|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK146003|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK002756|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	BC046972|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	NM_026172|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial
mm9_v1_chr4_+_11486066_11486118	0.706191	FOXD3.p2	AK078439|Rad54b|623474|RAD54 homolog B (S. cerevisiae)	BC057604|Rad54b|623474|RAD54 homolog B (S. cerevisiae)	NM_001039556|Rad54b|623474|RAD54 homolog B (S. cerevisiae)
mm9_v1_chr18_-_62915799_62916000	0.701266	FOXD3.p2	BC072581|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK012381|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK020725|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene
mm9_v1_chr11_-_120459646_120459770	0.699535	FOXD3.p2	AJ252140|Thoc4|21681|THO complex 4	NM_011568|Thoc4|21681|THO complex 4	U89876|Thoc4|21681|THO complex 4	BC120588|Thoc4|21681|THO complex 4	BC137658|Thoc4|21681|THO complex 4
mm9_v1_chr11_+_78312621_78312770	0.687822	FOXD3.p2	NM_011707|Vtn|22370|vitronectin	AK011736|Vtn|22370|vitronectin	AK090325|Vtn|22370|vitronectin	AK167494|Vtn|22370|vitronectin
mm9_v1_chr3_+_68808879_68808941	0.6844	FOXD3.p2	AK152804|Smc4|70099|structural maintenance of chromosomes 4	BC062939|Smc4|70099|structural maintenance of chromosomes 4	NM_133786|Smc4|70099|structural maintenance of chromosomes 4	AK010848|Smc4|70099|structural maintenance of chromosomes 4	AK133817|Smc4|70099|structural maintenance of chromosomes 4	AK088350|Smc4|70099|structural maintenance of chromosomes 4	AK088846|Smc4|70099|structural maintenance of chromosomes 4	BC061481|Smc4|70099|structural maintenance of chromosomes 4
mm9_v1_chr3_-_115832327_115832378	0.669236	FOXD3.p2	U12884|Vcam1|22329|vascular cell adhesion molecule 1	M84487|Vcam1|22329|vascular cell adhesion molecule 1	L08431|Vcam1|22329|vascular cell adhesion molecule 1	BC011159|Vcam1|22329|vascular cell adhesion molecule 1	AK016465|Vcam1|22329|vascular cell adhesion molecule 1	AK030195|Vcam1|22329|vascular cell adhesion molecule 1	AK143401|Vcam1|22329|vascular cell adhesion molecule 1	AK162954|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr18_+_60963495_60963509	0.667932	FOXD3.p2	AK002232|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	AK020607|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_001042605|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_010545|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC003476|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC096435|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	X07129|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
mm9_v1_chr4_-_6917628_6917956	0.66287	FOXD3.p2	AK161718|Tox|252838|thymocyte selection-associated high mobility group box	AK161578|Tox|252838|thymocyte selection-associated high mobility group box	AF472514|Tox|252838|thymocyte selection-associated high mobility group box	AK029694|Tox|252838|thymocyte selection-associated high mobility group box	AK133397|Tox|252838|thymocyte selection-associated high mobility group box	BC080732|Tox|252838|thymocyte selection-associated high mobility group box	AK038671|Tox|252838|thymocyte selection-associated high mobility group box	NM_145711|Tox|252838|thymocyte selection-associated high mobility group box
mm9_v1_chr9_-_114690887_114691007	0.662596	FOXD3.p2	AK151785|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AF188504|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168280|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	NM_133978|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC038633|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK167886|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC026773|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168024|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AY241869|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK040123|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7
mm9_v1_chr2_+_125977876_125977974	0.662026	FOXD3.p2	AK149746|Dtwd1|69185|DTW domain containing 1	NM_026981|Dtwd1|69185|DTW domain containing 1	BC020149|Dtwd1|69185|DTW domain containing 1
mm9_v1_chr7_+_25055436_25055599	0.659703	FOXD3.p2	AK132229|Zfp93|22755|zinc finger protein 93	NM_009567|Zfp93|22755|zinc finger protein 93	U46186|Zfp93|22755|zinc finger protein 93	AK146095|Zfp93|22755|zinc finger protein 93	AK165630|Zfp93|22755|zinc finger protein 93	AK040325|Zfp93|22755|zinc finger protein 93	AK028905|Zfp93|22755|zinc finger protein 93
mm9_v1_chr5_+_136108487_136108731	0.658848	FOXD3.p2	AK140006|Rhbdd2|215160|rhomboid domain containing 2	AK141182|Rhbdd2|215160|rhomboid domain containing 2	NM_146002|Rhbdd2|215160|rhomboid domain containing 2	AK165926|Rhbdd2|215160|rhomboid domain containing 2	AK041845|Rhbdd2|215160|rhomboid domain containing 2	AK030434|Rhbdd2|215160|rhomboid domain containing 2	AK043674|Rhbdd2|215160|rhomboid domain containing 2	BC018360|Rhbdd2|215160|rhomboid domain containing 2	BC028957|Rhbdd2|215160|rhomboid domain containing 2	AK189822|Rhbdd2|215160|rhomboid domain containing 2	AK212798|Rhbdd2|215160|rhomboid domain containing 2
mm9_v1_chr1_-_99873795_99873812	0.658755	FOXD3.p2	BC129869|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr2_+_132079092_132079159	0.654475	FOXD3.p2	
mm9_v1_chr4_-_107743887_107743940	0.654393	FOXD3.p2	AK002425|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chr6_-_3444484_3444497	0.653428	FOXD3.p2	BC096374|Hepacam2|101202|HEPACAM family member 2	AK033728|Hepacam2|101202|HEPACAM family member 2	AK050501|Hepacam2|101202|HEPACAM family member 2	NM_178899|Hepacam2|101202|HEPACAM family member 2
mm9_v1_chr2_+_152673699_152673817	0.653396	FOXD3.p2	NM_001141975|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	NM_001141976|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	NM_001141977|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	NM_001141978|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	NM_028109|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK090101|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK153957|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	BC060619|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm9_v1_chr5_-_137592066_137592132	0.649721	FOXD3.p2	BC045615|Trim56|384309|tripartite motif-containing 56	AK037350|Trim56|384309|tripartite motif-containing 56	NM_201373|Trim56|384309|tripartite motif-containing 56
mm9_v1_chr5_-_37187931_37187942	0.643127	FOXD3.p2	AK018675|Mrfap1|67568|Morf4 family associated protein 1	AK020049|Mrfap1|67568|Morf4 family associated protein 1	AK170789|Mrfap1|67568|Morf4 family associated protein 1
mm9_v1_chr10_+_98486068_98486102	0.641061	FOXD3.p2	AK136761|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr7_+_65913571_65913874	0.638978	FOXD3.p2	NM_009728|Atp10a|11982|ATPase, class V, type 10A	AK132174|Atp10a|11982|ATPase, class V, type 10A	AK172149|Atp10a|11982|ATPase, class V, type 10A	AF156549|Atp10a|11982|ATPase, class V, type 10A	BC138356|Atp10a|11982|ATPase, class V, type 10A	BC138357|Atp10a|11982|ATPase, class V, type 10A	AK172972|Atp10a|11982|ATPase, class V, type 10A	AF011337|Atp10a|11982|ATPase, class V, type 10A
mm9_v1_chr2_+_153171730_153171874	0.637237	FOXD3.p2	AK122413|Asxl1|228790|additional sex combs like 1 (Drosophila)	NM_001039939|Asxl1|228790|additional sex combs like 1 (Drosophila)
mm9_v1_chr12_+_75028976_75029036	0.637188	FOXD3.p2	AK076395|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr11_+_53164267_53164268	0.636262	FOXD3.p2	NM_033565|Aff4|93736|AF4/FMR2 family, member 4
mm9_v1_chr17_-_37095420_37095443	0.634672	FOXD3.p2	AK005976|Znrd1|66136|zinc ribbon domain containing, 1	AK019152|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr7_+_30023368_30023534	0.633925	FOXD3.p2	AK020444|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)
mm9_v1_chr3_+_95733186_95733221	0.633462	FOXD3.p2	AK088401|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK012759|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK049647|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK159446|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK147888|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr11_+_3863948_3864033	0.630719	FOXD3.p2	AK029075|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	NM_022889|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC004844|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC011142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK088831|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AF289539|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK220142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm9_v1_chr3_+_95733228_95733353	0.62563	FOXD3.p2	U89345|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK168380|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC080684|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC005690|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK202920|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK076049|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr2_+_44966657_44966746	0.624949	FOXD3.p2	BC031611|Gm13476|433424|predicted gene 13476	NM_001177394|Gm13476|433424|predicted gene 13476
mm9_v1_chr4_+_125773896_125773946	0.622526	FOXD3.p2	NM_001163266|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	NM_138721|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10
mm9_v1_chr6_-_65094691_65094750	0.621446	FOXD3.p2	BC116735|Hpgds|54486|hematopoietic prostaglandin D synthase	BC116737|Hpgds|54486|hematopoietic prostaglandin D synthase	AK020246|Hpgds|54486|hematopoietic prostaglandin D synthase	AK039392|Hpgds|54486|hematopoietic prostaglandin D synthase	NM_019455|Hpgds|54486|hematopoietic prostaglandin D synthase
mm9_v1_chr3_+_145784635_145784876	0.617121	FOXD3.p2	AK030819|Mcoln3|171166|mucolipin 3	AK035029|Mcoln3|171166|mucolipin 3	AK033008|Mcoln3|171166|mucolipin 3	AF475086|Mcoln3|171166|mucolipin 3	BC106856|Mcoln3|171166|mucolipin 3	BC106857|Mcoln3|171166|mucolipin 3	NM_134160|Mcoln3|171166|mucolipin 3	AY083531|Mcoln3|171166|mucolipin 3	AK191060|Mcoln3|171166|mucolipin 3	AK202150|Mcoln3|171166|mucolipin 3
mm9_v1_chr2_+_13500063_13500099	0.615343	FOXD3.p2	AK198215|Vim|22352|vimentin	AK208074|Vim|22352|vimentin	AK209588|Vim|22352|vimentin	AK209779|Vim|22352|vimentin	AK210390|Vim|22352|vimentin	AK210884|Vim|22352|vimentin	AK212337|Vim|22352|vimentin	AK212338|Vim|22352|vimentin	AK212907|Vim|22352|vimentin	AK213561|Vim|22352|vimentin	AK216501|Vim|22352|vimentin	AK217097|Vim|22352|vimentin	AK218080|Vim|22352|vimentin	AK218318|Vim|22352|vimentin	AK205873|Vim|22352|vimentin
mm9_v1_chr2_+_32612744_32612905	0.613711	FOXD3.p2	BC003466|Tor2a|30933|torsin family 2, member A	BC024469|Tor2a|30933|torsin family 2, member A	NM_152800|Tor2a|30933|torsin family 2, member A	AK170979|Tor2a|30933|torsin family 2, member A	AK171247|Tor2a|30933|torsin family 2, member A	AK162719|Tor2a|30933|torsin family 2, member A	AK019246|Tor2a|30933|torsin family 2, member A	AK185253|Tor2a|30933|torsin family 2, member A	AK189495|Tor2a|30933|torsin family 2, member A
mm9_v1_chr2_+_74707394_74707441	0.61365	FOXD3.p2	AK207939|Mtx2|53375|metaxin 2	AK212612|Mtx2|53375|metaxin 2	AK216047|Mtx2|53375|metaxin 2
mm9_v1_chr1_-_146024404_146024501	0.612972	FOXD3.p2	AF498319|Rgs13|246709|regulator of G-protein signaling 13	BC049624|Rgs13|246709|regulator of G-protein signaling 13	AK043268|Rgs13|246709|regulator of G-protein signaling 13	NM_153171|Rgs13|246709|regulator of G-protein signaling 13
mm9_v1_chr11_-_5607667_5607715	0.607062	FOXD3.p2	BC029262|Mrps24|64660|mitochondrial ribosomal protein S24	AK010590|Mrps24|64660|mitochondrial ribosomal protein S24	AK003117|Mrps24|64660|mitochondrial ribosomal protein S24	AK007338|Mrps24|64660|mitochondrial ribosomal protein S24	AK014099|Mrps24|64660|mitochondrial ribosomal protein S24	AK012461|Mrps24|64660|mitochondrial ribosomal protein S24	NM_026080|Mrps24|64660|mitochondrial ribosomal protein S24
mm9_v1_chr4_+_130219281_130219296	0.602193	FOXD3.p2	AK163977|Pum1|80912|pumilio 1 (Drosophila)	AK122205|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chrX_-_9694712_9694834	0.601215	FOXD3.p2	AB028049|Srpx|51795|sushi-repeat-containing protein	AB028050|Srpx|51795|sushi-repeat-containing protein	BC022572|Srpx|51795|sushi-repeat-containing protein	AK034696|Srpx|51795|sushi-repeat-containing protein	NM_016911|Srpx|51795|sushi-repeat-containing protein	BC027630|Srpx|51795|sushi-repeat-containing protein	AK159662|Srpx|51795|sushi-repeat-containing protein
mm9_v1_chr2_+_32583221_32583245	0.600143	FOXD3.p2	AK042709|Sh2d3c|27387|SH2 domain containing 3C	AK085885|Sh2d3c|27387|SH2 domain containing 3C	AK135231|Sh2d3c|27387|SH2 domain containing 3C	AB030442|Sh2d3c|27387|SH2 domain containing 3C
mm9_v1_chr1_+_19202046_19202134	0.59965	FOXD3.p2	AK032045|Tcfap2b|21419|transcription factor AP-2 beta	NM_001025305|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr4_+_24825226_24825304	0.597187	FOXD3.p2	NM_026742|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK160341|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK034728|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK019042|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	BC028764|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK003553|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4
mm9_v1_chr11_+_44430784_44430845	0.596558	FOXD3.p2	
mm9_v1_chr9_-_82868992_82869032	0.594491	FOXD3.p2	AJ303103|Phip|83946|pleckstrin homology domain interacting protein	AB049460|Phip|83946|pleckstrin homology domain interacting protein	BC037036|Phip|83946|pleckstrin homology domain interacting protein	AK044935|Phip|83946|pleckstrin homology domain interacting protein	BC049950|Phip|83946|pleckstrin homology domain interacting protein	AK049736|Phip|83946|pleckstrin homology domain interacting protein	AK136530|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr6_-_145024487_145024530	0.593195	FOXD3.p2	AK167368|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr10_+_24315247_24315401	0.592803	FOXD3.p2	NM_010217|Ctgf|14219|connective tissue growth factor	BC006783|Ctgf|14219|connective tissue growth factor	M80263|Ctgf|14219|connective tissue growth factor	M70642|Ctgf|14219|connective tissue growth factor
mm9_v1_chr6_+_117857771_117857856	0.591673	FOXD3.p2	NM_001166428|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	NM_001166429|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr4_+_126354857_126354998	0.591091	FOXD3.p2	NM_011970|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK078487|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK164463|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	BC008265|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AF060090|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2
mm9_v1_chr6_+_137703029_137703138	0.590387	FOXD3.p2	AK145820|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK168204|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK012558|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK008033|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK030961|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK075963|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150273|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK169418|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK152462|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK034347|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	BC016218|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK083298|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	NM_172733|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150712|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)
mm9_v1_chr5_-_123438517_123438541	0.589008	FOXD3.p2	NM_001005866|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr18_+_34490797_34490849	0.58695	FOXD3.p2	AK004118|Srp19|66384|signal recognition particle 19	AK037009|Srp19|66384|signal recognition particle 19	NM_025527|Srp19|66384|signal recognition particle 19	AK010760|Srp19|66384|signal recognition particle 19	AK152322|Srp19|66384|signal recognition particle 19	AK135508|Srp19|66384|signal recognition particle 19	AK162107|Srp19|66384|signal recognition particle 19	BC051932|Srp19|66384|signal recognition particle 19	AK009412|Srp19|66384|signal recognition particle 19
mm9_v1_chr5_-_110698874_110698881	0.585685	FOXD3.p2	AK049246|Pgam5|72542|phosphoglycerate mutase family member 5	AK169643|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr5_+_122298977_122299040	0.584519	FOXD3.p2	AK039192|Fam109a|231717|family with sequence similarity 109, member A	AK033618|Fam109a|231717|family with sequence similarity 109, member A	NM_175474|Fam109a|231717|family with sequence similarity 109, member A
mm9_v1_chr19_-_34329804_34329828	0.583071	FOXD3.p2	X13297|Acta2|11475|actin, alpha 2, smooth muscle, aorta	BC064800|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK017374|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK156331|Acta2|11475|actin, alpha 2, smooth muscle, aorta	NM_007392|Acta2|11475|actin, alpha 2, smooth muscle, aorta
mm9_v1_chr13_-_119175893_119176078	0.582057	FOXD3.p2	AK013360|Mrps30|59054|mitochondrial ribosomal protein S30	BC029784|Mrps30|59054|mitochondrial ribosomal protein S30	AK011476|Mrps30|59054|mitochondrial ribosomal protein S30	AK151642|Mrps30|59054|mitochondrial ribosomal protein S30	NM_021556|Mrps30|59054|mitochondrial ribosomal protein S30
mm9_v1_chr11_+_94189303_94189504	0.577875	FOXD3.p2	NM_027799|Ankrd40|71452|ankyrin repeat domain 40	NM_146024|Ankrd40|71452|ankyrin repeat domain 40	BC023133|Ankrd40|71452|ankyrin repeat domain 40
mm9_v1_chr12_-_11272479_11272602	0.576281	FOXD3.p2	BC138157|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	BC138158|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	AK031077|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	BC099936|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	BC090653|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	NM_177331|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	AK030995|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	AK158255|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)
mm9_v1_chr1_-_44159187_44159306	0.573876	FOXD3.p2	BC116881|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	BC119032|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	AK160565|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	NM_029368|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	BC099557|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene
mm9_v1_chr3_+_63780058_63780135	0.571637	FOXD3.p2	AK143197|Gmps|229363|guanine monophosphate synthetase	NM_001033300|Gmps|229363|guanine monophosphate synthetase	AK169701|Gmps|229363|guanine monophosphate synthetase	AK169043|Gmps|229363|guanine monophosphate synthetase	AK167857|Gmps|229363|guanine monophosphate synthetase	AK049755|Gmps|229363|guanine monophosphate synthetase	BC138411|Gmps|229363|guanine monophosphate synthetase	BC138412|Gmps|229363|guanine monophosphate synthetase	AK168239|Gmps|229363|guanine monophosphate synthetase
mm9_v1_chr7_-_140315030_140315061	0.57149	FOXD3.p2	AB033123|Ctbp2|13017|C-terminal binding protein 2	AK147871|Ctbp2|13017|C-terminal binding protein 2	AK146713|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr1_-_180267841_180267909	0.569599	FOXD3.p2	AF073992|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK159956|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK037517|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK168657|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK029944|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK159084|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr13_+_23625779_23625779	0.569254	FOXD3.p2	BC125011|Hist1h2af|319173|histone cluster 1, H2af	NM_175661|Hist1h2af|319173|histone cluster 1, H2af
mm9_v1_chr7_+_20094042_20094114	0.56861	FOXD3.p2	BC106114|Trappc6a|67091|trafficking protein particle complex 6A	NM_025960|Trappc6a|67091|trafficking protein particle complex 6A	AK007965|Trappc6a|67091|trafficking protein particle complex 6A	AK008022|Trappc6a|67091|trafficking protein particle complex 6A	AK008462|Trappc6a|67091|trafficking protein particle complex 6A	AK088832|Trappc6a|67091|trafficking protein particle complex 6A	BC020128|Trappc6a|67091|trafficking protein particle complex 6A	AK015839|Trappc6a|67091|trafficking protein particle complex 6A
mm9_v1_chr8_-_8666771_8666782	0.566993	FOXD3.p2	AK038412|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr6_-_87793898_87794088	0.566144	FOXD3.p2	AK207643|Cnbp|12785|cellular nucleic acid binding protein	AK188144|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr7_-_26506741_26506878	0.565424	FOXD3.p2	
mm9_v1_chr16_+_36828464_36828529	0.565237	FOXD3.p2	NM_177128|Iqcb1|320299|IQ calmodulin-binding motif containing 1	BC029084|Iqcb1|320299|IQ calmodulin-binding motif containing 1	AK078554|Iqcb1|320299|IQ calmodulin-binding motif containing 1	AK165220|Iqcb1|320299|IQ calmodulin-binding motif containing 1
mm9_v1_chr9_+_85739048_85739158	0.560798	FOXD3.p2	AK050794|Tpbg|21983|trophoblast glycoprotein
mm9_v1_chr18_+_31948788_31948829	0.558208	FOXD3.p2	AK011600|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027002|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	AK009093|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	BC004810|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027101|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D
mm9_v1_chr10_+_126503214_126503242	0.548806	FOXD3.p2	AK012202|Cdk4|12567|cyclin-dependent kinase 4
mm9_v1_chr4_+_48552806_48552952	0.548668	FOXD3.p2	AK075956|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145925|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK017795|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK011381|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145924|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene
mm9_v1_chr9_-_72339762_72339907	0.535358	FOXD3.p2	AK008505|Tex9|21778|testis expressed gene 9	AK012189|Tex9|21778|testis expressed gene 9	AK018568|Tex9|21778|testis expressed gene 9	AK032490|Tex9|21778|testis expressed gene 9	AK141174|Tex9|21778|testis expressed gene 9	NM_009359|Tex9|21778|testis expressed gene 9	BC141033|Tex9|21778|testis expressed gene 9	BC145184|Tex9|21778|testis expressed gene 9	BC145185|Tex9|21778|testis expressed gene 9	BC145186|Tex9|21778|testis expressed gene 9
mm9_v1_chr10_+_127669118_127669147	0.532398	FOXD3.p2	BC052884|Timeless|21853|timeless homolog (Drosophila)	NM_001136082|Timeless|21853|timeless homolog (Drosophila)	NM_001164080|Timeless|21853|timeless homolog (Drosophila)	NM_001164081|Timeless|21853|timeless homolog (Drosophila)	AK162012|Timeless|21853|timeless homolog (Drosophila)	AK153838|Timeless|21853|timeless homolog (Drosophila)	BC064788|Timeless|21853|timeless homolog (Drosophila)	AB019001|Timeless|21853|timeless homolog (Drosophila)	AF071506|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr6_+_145882641_145882808	0.530528	FOXD3.p2	AK162864|Sspn|16651|sarcospan	AK163041|Sspn|16651|sarcospan	AK164430|Sspn|16651|sarcospan	BC021484|Sspn|16651|sarcospan	NM_010656|Sspn|16651|sarcospan	U02487|Sspn|16651|sarcospan	AK148179|Sspn|16651|sarcospan	AK164529|Sspn|16651|sarcospan
mm9_v1_chr11_-_17111513_17111579	0.528911	FOXD3.p2	AK165942|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK007324|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK009146|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK009896|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK017153|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	BC020037|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AF349950|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)
mm9_v1_chr7_-_107731579_107731643	0.528398	FOXD3.p2	AK077636|Mrpl48|52443|mitochondrial ribosomal protein L48	BC037190|Mrpl48|52443|mitochondrial ribosomal protein L48	AK019161|Mrpl48|52443|mitochondrial ribosomal protein L48	AK171917|Mrpl48|52443|mitochondrial ribosomal protein L48	NM_198831|Mrpl48|52443|mitochondrial ribosomal protein L48
mm9_v1_chr6_+_83065466_83065564	0.528357	FOXD3.p2	AK144946|Mogs|57377|mannosyl-oligosaccharide glucosidase	BC051949|Mogs|57377|mannosyl-oligosaccharide glucosidase	NM_020619|Mogs|57377|mannosyl-oligosaccharide glucosidase	AK157286|Mogs|57377|mannosyl-oligosaccharide glucosidase
mm9_v1_chr15_+_99803210_99803320	0.525092	FOXD3.p2	NM_001024526|Larp4|207214|La ribonucleoprotein domain family, member 4	AK165392|Larp4|207214|La ribonucleoprotein domain family, member 4	AK172198|Larp4|207214|La ribonucleoprotein domain family, member 4	AK049756|Larp4|207214|La ribonucleoprotein domain family, member 4	BC075726|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr2_+_103810274_103810481	0.523226	FOXD3.p2	AK013416|Lmo2|16909|LIM domain only 2	BC057880|Lmo2|16909|LIM domain only 2	NM_001142335|Lmo2|16909|LIM domain only 2	NM_008505|Lmo2|16909|LIM domain only 2
mm9_v1_chrX_+_162608411_162608448	0.520406	FOXD3.p2	AK045118|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK160583|Gemin8|237221|gem (nuclear organelle) associated protein 8	NM_146238|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK085045|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK037580|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK047511|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK053774|Gemin8|237221|gem (nuclear organelle) associated protein 8
mm9_v1_chr13_-_24853723_24853834	0.519739	FOXD3.p2	AF068780|Gmnn|57441|geminin	BC020061|Gmnn|57441|geminin	AK131959|Gmnn|57441|geminin	NM_020567|Gmnn|57441|geminin
mm9_v1_chr13_-_23712946_23712992	0.516305	FOXD3.p2	AK049948|Hist1h2be|319179|histone cluster 1, H2be	NM_001177653|Hist1h2be|319179|histone cluster 1, H2be	AK030546|Hist1h2be|319179|histone cluster 1, H2be	NM_178194|Hist1h2be|319179|histone cluster 1, H2be
mm9_v1_chr5_-_123439064_123439107	0.51568	FOXD3.p2	BC065090|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK043352|Kdm2b|30841|lysine (K)-specific demethylase 2B	NM_001003953|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK136625|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr2_+_103935948_103936036	0.513879	FOXD3.p2	NM_001111060|Cd59a|12509|CD59a antigen	NM_007652|Cd59a|12509|CD59a antigen	AK005507|Cd59a|12509|CD59a antigen	AK018136|Cd59a|12509|CD59a antigen	AK002743|Cd59a|12509|CD59a antigen	AK080728|Cd59a|12509|CD59a antigen	U60473|Cd59a|12509|CD59a antigen
mm9_v1_chr1_-_45559904_45559916	0.513337	FOXD3.p2	AK147220|Col5a2|12832|collagen, type V, alpha 2	AK080811|Col5a2|12832|collagen, type V, alpha 2	AK084285|Col5a2|12832|collagen, type V, alpha 2	AK132413|Col5a2|12832|collagen, type V, alpha 2	AK151929|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr17_-_51951378_51951378	0.510184	FOXD3.p2	AK158518|Satb1|20230|special AT-rich sequence binding protein 1	NM_001163630|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr9_-_107888185_107888220	0.507506	FOXD3.p2	BC115538|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK020090|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK076092|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene
mm9_v1_chr1_+_17717497_17717562	0.50694	FOXD3.p2	AK133870|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1	AK137611|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1	NM_031402|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1	AF329198|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1	AK134273|Crispld1|83691|cysteine-rich secretory protein LCCL domain containing 1
mm9_v1_chr11_+_102465684_102465793	0.505238	FOXD3.p2	NM_020510|Fzd2|57265|frizzled homolog 2 (Drosophila)	BC055727|Fzd2|57265|frizzled homolog 2 (Drosophila)	AK048420|Fzd2|57265|frizzled homolog 2 (Drosophila)	AK135363|Fzd2|57265|frizzled homolog 2 (Drosophila)
mm9_v1_chr13_-_23515682_23515773	0.503243	FOXD3.p2	AB021860|Abt1|30946|activator of basal transcription 1	AK019220|Abt1|30946|activator of basal transcription 1	AK019221|Abt1|30946|activator of basal transcription 1	BC082609|Abt1|30946|activator of basal transcription 1	AK009557|Abt1|30946|activator of basal transcription 1	AK029222|Abt1|30946|activator of basal transcription 1	NM_013924|Abt1|30946|activator of basal transcription 1
mm9_v1_chr17_-_32557916_32557924	0.503047	FOXD3.p2	AF149837|Pglyrp2|57757|peptidoglycan recognition protein 2	AF149838|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315578|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315584|Pglyrp2|57757|peptidoglycan recognition protein 2	AF317548|Pglyrp2|57757|peptidoglycan recognition protein 2	AK050019|Pglyrp2|57757|peptidoglycan recognition protein 2	NM_021319|Pglyrp2|57757|peptidoglycan recognition protein 2
mm9_v1_chr10_-_75931540_75931574	0.502435	FOXD3.p2	AK004411|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr6_+_91828040_91828112	0.502365	FOXD3.p2	NM_172730|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	BC051147|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK170727|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK156259|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK081505|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK039818|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK155581|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK170492|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	BC038871|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK051852|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene
mm9_v1_chr9_+_104955563_104955826	0.499717	FOXD3.p2	AK008592|Mrpl3|94062|mitochondrial ribosomal protein L3	AK145687|Mrpl3|94062|mitochondrial ribosomal protein L3	AK169272|Mrpl3|94062|mitochondrial ribosomal protein L3	NM_053159|Mrpl3|94062|mitochondrial ribosomal protein L3	AK077857|Mrpl3|94062|mitochondrial ribosomal protein L3	AK002509|Mrpl3|94062|mitochondrial ribosomal protein L3	BC011128|Mrpl3|94062|mitochondrial ribosomal protein L3	BC016586|Mrpl3|94062|mitochondrial ribosomal protein L3	BC034877|Mrpl3|94062|mitochondrial ribosomal protein L3	AB049633|Mrpl3|94062|mitochondrial ribosomal protein L3	AK217246|Mrpl3|94062|mitochondrial ribosomal protein L3
mm9_v1_chr9_-_82869034_82869071	0.498411	FOXD3.p2	BC022102|Phip|83946|pleckstrin homology domain interacting protein	BC039765|Phip|83946|pleckstrin homology domain interacting protein	AK050025|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr4_-_33010429_33010479	0.498194	FOXD3.p2	BC065177|Ankrd6|140577|ankyrin repeat domain 6	NM_001012450|Ankrd6|140577|ankyrin repeat domain 6	NM_080471|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr11_-_57981970_57982020	0.497787	FOXD3.p2	AK049216|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC137802|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144921|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144922|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK143536|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK131137|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr1_-_128634766_128634787	0.496852	FOXD3.p2	AK083792|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr2_-_120389559_120389604	0.494883	FOXD3.p2	AK147887|Zfp106|20402|zinc finger protein 106	AK089359|Zfp106|20402|zinc finger protein 106	AK155019|Zfp106|20402|zinc finger protein 106	NM_011743|Zfp106|20402|zinc finger protein 106
mm9_v1_chr12_-_86113816_86113911	0.493808	FOXD3.p2	AB021289|Npc2|67963|Niemann Pick type C2	AK149805|Npc2|67963|Niemann Pick type C2	AK151067|Npc2|67963|Niemann Pick type C2	AK154838|Npc2|67963|Niemann Pick type C2	AK008603|Npc2|67963|Niemann Pick type C2	AK151133|Npc2|67963|Niemann Pick type C2	AK152236|Npc2|67963|Niemann Pick type C2	AK153020|Npc2|67963|Niemann Pick type C2	AK153203|Npc2|67963|Niemann Pick type C2	AK167869|Npc2|67963|Niemann Pick type C2	AK170327|Npc2|67963|Niemann Pick type C2	BC003471|Npc2|67963|Niemann Pick type C2	AK165263|Npc2|67963|Niemann Pick type C2	AK009127|Npc2|67963|Niemann Pick type C2	AK159154|Npc2|67963|Niemann Pick type C2	BC007190|Npc2|67963|Niemann Pick type C2	AK012239|Npc2|67963|Niemann Pick type C2
mm9_v1_chr5_-_65726802_65726885	0.492444	FOXD3.p2	U07157|Rfc1|19687|replication factor C (activator 1) 1	X72711|Rfc1|19687|replication factor C (activator 1) 1	BC085174|Rfc1|19687|replication factor C (activator 1) 1	U01222|Rfc1|19687|replication factor C (activator 1) 1	U36441|Rfc1|19687|replication factor C (activator 1) 1	BC085173|Rfc1|19687|replication factor C (activator 1) 1	AK136937|Rfc1|19687|replication factor C (activator 1) 1	AK132028|Rfc1|19687|replication factor C (activator 1) 1	AK146164|Rfc1|19687|replication factor C (activator 1) 1	AK146314|Rfc1|19687|replication factor C (activator 1) 1	NM_011258|Rfc1|19687|replication factor C (activator 1) 1	U15037|Rfc1|19687|replication factor C (activator 1) 1
mm9_v1_chr18_-_16966954_16967033	0.490959	FOXD3.p2	AK087418|Cdh2|12558|cadherin 2	BC022107|Cdh2|12558|cadherin 2	AK032826|Cdh2|12558|cadherin 2
mm9_v1_chr6_-_114871769_114871855	0.489923	FOXD3.p2	BC048841|Vgll4|232334|vestigial like 4 (Drosophila)	NM_177683|Vgll4|232334|vestigial like 4 (Drosophila)	BC060305|Vgll4|232334|vestigial like 4 (Drosophila)	AK144447|Vgll4|232334|vestigial like 4 (Drosophila)	AK078466|Vgll4|232334|vestigial like 4 (Drosophila)
mm9_v1_chr6_-_71094313_71094369	0.488767	FOXD3.p2	BC025604|Thnsl2|232078|threonine synthase-like 2 (bacterial)	BC051244|Thnsl2|232078|threonine synthase-like 2 (bacterial)	AK165463|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_001033929|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_178413|Thnsl2|232078|threonine synthase-like 2 (bacterial)
mm9_v1_chr2_-_13466273_13466302	0.487097	FOXD3.p2	AF045889|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AF012129|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AK050403|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AK029136|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	BC087892|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	NM_010067|Trdmt1|13434|tRNA aspartic acid methyltransferase 1
mm9_v1_chr3_+_133902563_133902608	0.486662	FOXD3.p2	BC082332|Cxxc4|319478|CXXC finger 4
mm9_v1_chr15_-_8395352_8395358	0.486271	FOXD3.p2	
mm9_v1_chr4_+_104830022_104830255	0.486184	FOXD3.p2	AK160056|Ppap2b|67916|phosphatidic acid phosphatase type 2B	AK076183|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr11_-_86517662_86517713	0.482755	FOXD3.p2	AK167527|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr11_-_53083217_53083336	0.482245	FOXD3.p2	AK180907|Hspa4|15525|heat shock protein 4	AK148883|Hspa4|15525|heat shock protein 4
mm9_v1_chr11_-_77997042_77997098	0.481447	FOXD3.p2	BC026656|Rpl23a|268449|ribosomal protein L23A	BC096637|Rpl23a|268449|ribosomal protein L23A	AF452721|Rpl23a|268449|ribosomal protein L23A	BC029892|Rpl23a|268449|ribosomal protein L23A	AK028387|Rpl23a|268449|ribosomal protein L23A	AK152095|Rpl23a|268449|ribosomal protein L23A	BC086884|Rpl23a|268449|ribosomal protein L23A	BC086883|Rpl23a|268449|ribosomal protein L23A	BC125640|Rpl23a|268449|ribosomal protein L23A	BC125642|Rpl23a|268449|ribosomal protein L23A	NM_207523|Rpl23a|268449|ribosomal protein L23A
mm9_v1_chr1_+_15795704_15795751	0.47493	FOXD3.p2	AK036615|Terf1|21749|telomeric repeat binding factor 1	AK021235|Terf1|21749|telomeric repeat binding factor 1	BC034866|Terf1|21749|telomeric repeat binding factor 1	NM_009352|Terf1|21749|telomeric repeat binding factor 1	AK132022|Terf1|21749|telomeric repeat binding factor 1	AB109563|Terf1|21749|telomeric repeat binding factor 1	U65586|Terf1|21749|telomeric repeat binding factor 1
mm9_v1_chr10_+_111409750_111409849	0.47489	FOXD3.p2	NM_178610|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK012108|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK045526|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK036447|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK146926|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC089510|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK011972|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK030560|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK032472|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK041854|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK168675|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC094236|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr14_-_58444986_58445016	0.473124	FOXD3.p2	AK166171|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	BC117500|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	BC117501|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	AK089223|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	NM_198605|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	AK158142|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene
mm9_v1_chr16_-_10993155_10993281	0.471882	FOXD3.p2	AK159533|Litaf|56722|LPS-induced TN factor	AF171100|Litaf|56722|LPS-induced TN factor	BC018559|Litaf|56722|LPS-induced TN factor	AK018578|Litaf|56722|LPS-induced TN factor	AK078708|Litaf|56722|LPS-induced TN factor	AK151053|Litaf|56722|LPS-induced TN factor	NM_019980|Litaf|56722|LPS-induced TN factor	AK076162|Litaf|56722|LPS-induced TN factor
mm9_v1_chr5_-_110698814_110698873	0.470973	FOXD3.p2	BC052179|Pgam5|72542|phosphoglycerate mutase family member 5	BC021317|Pgam5|72542|phosphoglycerate mutase family member 5	AK162266|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr15_-_83425479_83425610	0.468102	FOXD3.p2	AM690756|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	BC055368|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK084879|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK134345|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK150116|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK143496|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	NM_183017|Ttll12|223723|tubulin tyrosine ligase-like family, member 12
mm9_v1_chr9_-_91255831_91255857	0.466115	FOXD3.p2	AK141431|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chrX_-_160514370_160514457	0.465516	FOXD3.p2	
mm9_v1_chr1_-_14299936_14300280	0.465398	FOXD3.p2	BC066860|Eya1|14048|eyes absent 1 homolog (Drosophila)	AK045320|Eya1|14048|eyes absent 1 homolog (Drosophila)	AK042412|Eya1|14048|eyes absent 1 homolog (Drosophila)	BC060260|Eya1|14048|eyes absent 1 homolog (Drosophila)	NM_010164|Eya1|14048|eyes absent 1 homolog (Drosophila)	AK153788|Eya1|14048|eyes absent 1 homolog (Drosophila)
mm9_v1_chr3_-_130412297_130412356	0.465272	FOXD3.p2	AK011085|Ostc|66357|oligosaccharyltransferase complex subunit	AK017845|Ostc|66357|oligosaccharyltransferase complex subunit	AK135332|Ostc|66357|oligosaccharyltransferase complex subunit	AK013011|Ostc|66357|oligosaccharyltransferase complex subunit	AK032969|Ostc|66357|oligosaccharyltransferase complex subunit	AK009237|Ostc|66357|oligosaccharyltransferase complex subunit	BC014799|Ostc|66357|oligosaccharyltransferase complex subunit	BC021935|Ostc|66357|oligosaccharyltransferase complex subunit
mm9_v1_chr5_-_110698882_110698900	0.464127	FOXD3.p2	AK012159|Pgam5|72542|phosphoglycerate mutase family member 5	AK034588|Pgam5|72542|phosphoglycerate mutase family member 5	BC138924|Pgam5|72542|phosphoglycerate mutase family member 5	BC138925|Pgam5|72542|phosphoglycerate mutase family member 5	BC145467|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr2_+_156665812_156665874	0.463923	FOXD3.p2	AK029490|Tgif2|228839|TGFB-induced factor homeobox 2	NM_173396|Tgif2|228839|TGFB-induced factor homeobox 2	BC138706|Tgif2|228839|TGFB-induced factor homeobox 2	BC138705|Tgif2|228839|TGFB-induced factor homeobox 2	AK157623|Tgif2|228839|TGFB-induced factor homeobox 2	AK017884|Tgif2|228839|TGFB-induced factor homeobox 2
mm9_v1_chr9_+_74696269_74696406	0.463734	FOXD3.p2	AK050237|Onecut1|15379|one cut domain, family member 1	AK051235|Onecut1|15379|one cut domain, family member 1	BC023444|Onecut1|15379|one cut domain, family member 1
mm9_v1_chr2_-_29643157_29643203	0.462092	FOXD3.p2	BC024075|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK167294|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	BC015285|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK050583|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK087102|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK050587|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK081579|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK043949|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	NM_145520|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)
mm9_v1_chr4_+_94281210_94281261	0.461258	FOXD3.p2	NM_026319|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC005798|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK014770|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK011690|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK053369|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC023760|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC049156|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)
mm9_v1_chr19_-_60302571_60302605	0.460718	FOXD3.p2	BC056640|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK011404|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK044853|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK075914|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	NM_029648|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	BC048505|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed
mm9_v1_chr5_-_37187944_37188018	0.45982	FOXD3.p2	AK009827|Mrfap1|67568|Morf4 family associated protein 1	BC010209|Mrfap1|67568|Morf4 family associated protein 1	AK170909|Mrfap1|67568|Morf4 family associated protein 1	AK170984|Mrfap1|67568|Morf4 family associated protein 1	AK017832|Mrfap1|67568|Morf4 family associated protein 1	AK167112|Mrfap1|67568|Morf4 family associated protein 1	AB041651|Mrfap1|67568|Morf4 family associated protein 1	AK159464|Mrfap1|67568|Morf4 family associated protein 1	AK005313|Mrfap1|67568|Morf4 family associated protein 1	NM_026242|Mrfap1|67568|Morf4 family associated protein 1
mm9_v1_chr11_-_116711807_116712035	0.45766	FOXD3.p2	AK211203|Srsf2|20382|serine/arginine-rich splicing factor 2	AK207032|Srsf2|20382|serine/arginine-rich splicing factor 2	AK212169|Srsf2|20382|serine/arginine-rich splicing factor 2	AK220014|Srsf2|20382|serine/arginine-rich splicing factor 2	AF250134|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr9_+_38525852_38525929	0.457103	FOXD3.p2	NM_001145957|Vwa5a|67776|von Willebrand factor A domain containing 5A	NM_172767|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK161193|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK054497|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK136934|Vwa5a|67776|von Willebrand factor A domain containing 5A	AY366502|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK041397|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK019914|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK053665|Vwa5a|67776|von Willebrand factor A domain containing 5A	BC065153|Vwa5a|67776|von Willebrand factor A domain containing 5A
mm9_v1_chr10_+_62409776_62409857	0.456322	FOXD3.p2	NM_177372|Dna2|327762|DNA replication helicase 2 homolog (yeast)	AK129051|Dna2|327762|DNA replication helicase 2 homolog (yeast)	AK028381|Dna2|327762|DNA replication helicase 2 homolog (yeast)	BC115716|Dna2|327762|DNA replication helicase 2 homolog (yeast)	BC030382|Dna2|327762|DNA replication helicase 2 homolog (yeast)
mm9_v1_chr9_-_101101334_101101402	0.455653	FOXD3.p2	AK169510|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	AK132175|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	NM_172144|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr4_+_104829867_104829919	0.45513	FOXD3.p2	AK159136|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr16_+_17018484_17018507	0.453582	FOXD3.p2	AK193161|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr11_-_106860750_106860783	0.453315	FOXD3.p2	BC094011|Kpna2|16647|karyopherin (importin) alpha 2	BC106110|Kpna2|16647|karyopherin (importin) alpha 2	BC082280|Kpna2|16647|karyopherin (importin) alpha 2	BC086789|Kpna2|16647|karyopherin (importin) alpha 2	BC006720|Kpna2|16647|karyopherin (importin) alpha 2	BC003274|Kpna2|16647|karyopherin (importin) alpha 2	U12270|Kpna2|16647|karyopherin (importin) alpha 2	AK139850|Kpna2|16647|karyopherin (importin) alpha 2	AK166982|Kpna2|16647|karyopherin (importin) alpha 2	AK075952|Kpna2|16647|karyopherin (importin) alpha 2	AK088496|Kpna2|16647|karyopherin (importin) alpha 2	AK147135|Kpna2|16647|karyopherin (importin) alpha 2	AK165577|Kpna2|16647|karyopherin (importin) alpha 2	AK166790|Kpna2|16647|karyopherin (importin) alpha 2	AK167551|Kpna2|16647|karyopherin (importin) alpha 2	AK169283|Kpna2|16647|karyopherin (importin) alpha 2	AK166577|Kpna2|16647|karyopherin (importin) alpha 2
mm9_v1_chr11_-_57982024_57982049	0.450775	FOXD3.p2	NM_001166669|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166670|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166671|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_172558|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr5_-_136611846_136611947	0.450209	FOXD3.p2	AK004717|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK154352|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK051910|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK167020|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK172708|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK153976|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	BC048397|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK042370|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK084948|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	NM_027891|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1
mm9_v1_chr12_+_11272852_11273004	0.44874	FOXD3.p2	AK220488|Smc6|67241|structural maintenance of chromosomes 6	AK148478|Smc6|67241|structural maintenance of chromosomes 6	AK012626|Smc6|67241|structural maintenance of chromosomes 6	BC048790|Smc6|67241|structural maintenance of chromosomes 6	AK088002|Smc6|67241|structural maintenance of chromosomes 6	AK135873|Smc6|67241|structural maintenance of chromosomes 6	AK009009|Smc6|67241|structural maintenance of chromosomes 6	AK011982|Smc6|67241|structural maintenance of chromosomes 6	AK050341|Smc6|67241|structural maintenance of chromosomes 6	BC099955|Smc6|67241|structural maintenance of chromosomes 6
mm9_v1_chr18_-_43847367_43847426	0.448122	FOXD3.p2	AK133750|Jakmip2|76217|janus kinase and microtubule interacting protein 2	NM_001163637|Jakmip2|76217|janus kinase and microtubule interacting protein 2
mm9_v1_chr3_+_5218545_5218658	0.44618	FOXD3.p2	AK084213|Zfhx4|80892|zinc finger homeodomain 4	BC061199|Zfhx4|80892|zinc finger homeodomain 4	NM_030708|Zfhx4|80892|zinc finger homeodomain 4	AK044540|Zfhx4|80892|zinc finger homeodomain 4
mm9_v1_chr6_-_128388502_128388671	0.445785	FOXD3.p2	AK212190|Fkbp4|14228|FK506 binding protein 4	X17069|Fkbp4|14228|FK506 binding protein 4	X70887|Fkbp4|14228|FK506 binding protein 4	AK160202|Fkbp4|14228|FK506 binding protein 4	AK083912|Fkbp4|14228|FK506 binding protein 4	NM_010219|Fkbp4|14228|FK506 binding protein 4	AK089972|Fkbp4|14228|FK506 binding protein 4	BC003447|Fkbp4|14228|FK506 binding protein 4
mm9_v1_chr10_+_67442317_67442462	0.445194	FOXD3.p2	AK052662|Rtkn2|170799|rhotekin 2	NM_001081346|Rtkn2|170799|rhotekin 2	BC158093|Rtkn2|170799|rhotekin 2	BC116341|Rtkn2|170799|rhotekin 2	BC116342|Rtkn2|170799|rhotekin 2	AK045134|Rtkn2|170799|rhotekin 2	AK030986|Rtkn2|170799|rhotekin 2
mm9_v1_chr5_-_118605391_118605453	0.443995	FOXD3.p2	AK034447|Fbxw8|231672|F-box and WD-40 domain protein 8	AK047756|Fbxw8|231672|F-box and WD-40 domain protein 8	BC009095|Fbxw8|231672|F-box and WD-40 domain protein 8	AK047695|Fbxw8|231672|F-box and WD-40 domain protein 8
mm9_v1_chr9_+_110558996_110559065	0.443801	FOXD3.p2	AK012610|Ccdc12|72654|coiled-coil domain containing 12	NM_028312|Ccdc12|72654|coiled-coil domain containing 12	BC026668|Ccdc12|72654|coiled-coil domain containing 12
mm9_v1_chr5_-_101103051_101103304	0.442271	FOXD3.p2	BC080773|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK009092|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	NM_027978|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)
mm9_v1_chr11_-_69495203_69495445	0.440658	FOXD3.p2	AY008764|Senp3|80886|SUMO/sentrin specific peptidase 3	BC037014|Senp3|80886|SUMO/sentrin specific peptidase 3	AK045071|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chr2_-_33323966_33324113	0.439711	FOXD3.p2	AK206442|Zbtb43|71834|zinc finger and BTB domain containing 43	AK212293|Zbtb43|71834|zinc finger and BTB domain containing 43	AK122277|Zbtb43|71834|zinc finger and BTB domain containing 43	AK005818|Zbtb43|71834|zinc finger and BTB domain containing 43	AK147806|Zbtb43|71834|zinc finger and BTB domain containing 43	BC043117|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_001025594|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_027947|Zbtb43|71834|zinc finger and BTB domain containing 43
mm9_v1_chr2_-_113688771_113688881	0.439099	FOXD3.p2	BC050875|Arhgap11a|228482|Rho GTPase activating protein 11A	AK129034|Arhgap11a|228482|Rho GTPase activating protein 11A	BC058105|Arhgap11a|228482|Rho GTPase activating protein 11A	NM_181416|Arhgap11a|228482|Rho GTPase activating protein 11A	AK162074|Arhgap11a|228482|Rho GTPase activating protein 11A
mm9_v1_chr15_-_103085703_103085858	0.437028	FOXD3.p2	BC062171|Nfe2|18022|nuclear factor, erythroid derived 2	NM_008685|Nfe2|18022|nuclear factor, erythroid derived 2	L09600|Nfe2|18022|nuclear factor, erythroid derived 2
mm9_v1_chr3_+_159502646_159502709	0.436427	FOXD3.p2	BC075615|Wls|68151|wntless homolog (Drosophila)	NM_026582|Wls|68151|wntless homolog (Drosophila)	AK029053|Wls|68151|wntless homolog (Drosophila)	AK044810|Wls|68151|wntless homolog (Drosophila)	AK019886|Wls|68151|wntless homolog (Drosophila)	AK029104|Wls|68151|wntless homolog (Drosophila)	AK029315|Wls|68151|wntless homolog (Drosophila)	AK031444|Wls|68151|wntless homolog (Drosophila)	AK049842|Wls|68151|wntless homolog (Drosophila)	AK128912|Wls|68151|wntless homolog (Drosophila)	AK159207|Wls|68151|wntless homolog (Drosophila)	AK159977|Wls|68151|wntless homolog (Drosophila)	AK077407|Wls|68151|wntless homolog (Drosophila)
mm9_v1_chr6_+_113102884_113103027	0.434808	FOXD3.p2	AK088328|Setd5|72895|SET domain containing 5
mm9_v1_chr14_-_99498905_99499000	0.431886	FOXD3.p2	AK012840|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	BC027357|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	AK038313|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	NM_028315|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)
mm9_v1_chr10_-_8605668_8605870	0.430443	FOXD3.p2	AJ507736|Sash1|70097|SAM and SH3 domain containing 1	AK149872|Sash1|70097|SAM and SH3 domain containing 1	AK049453|Sash1|70097|SAM and SH3 domain containing 1	NM_175155|Sash1|70097|SAM and SH3 domain containing 1
mm9_v1_chr10_+_81022304_81022369	0.430256	FOXD3.p2	AK158714|Aes|14797|amino-terminal enhancer of split	NM_010347|Aes|14797|amino-terminal enhancer of split	L12140|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr10_+_56097078_56097350	0.428336	FOXD3.p2	AY427554|Gja1|14609|gap junction protein, alpha 1	AY427555|Gja1|14609|gap junction protein, alpha 1	NM_010288|Gja1|14609|gap junction protein, alpha 1	M63801|Gja1|14609|gap junction protein, alpha 1	AK011459|Gja1|14609|gap junction protein, alpha 1	AK036979|Gja1|14609|gap junction protein, alpha 1	AK145692|Gja1|14609|gap junction protein, alpha 1	AK161997|Gja1|14609|gap junction protein, alpha 1	AK171955|Gja1|14609|gap junction protein, alpha 1	AY427560|Gja1|14609|gap junction protein, alpha 1	BC006894|Gja1|14609|gap junction protein, alpha 1	BC055375|Gja1|14609|gap junction protein, alpha 1	AK029291|Gja1|14609|gap junction protein, alpha 1	AK165986|Gja1|14609|gap junction protein, alpha 1	X61576|Gja1|14609|gap junction protein, alpha 1	AY427556|Gja1|14609|gap junction protein, alpha 1	AY427557|Gja1|14609|gap junction protein, alpha 1	AY427558|Gja1|14609|gap junction protein, alpha 1
mm9_v1_chr5_+_93602126_93602279	0.427931	FOXD3.p2	AK018083|Sept11|52398|septin 11	AK075989|Sept11|52398|septin 11
mm9_v1_chr1_-_121545442_121545576	0.426559	FOXD3.p2	AK034676|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK047523|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK173198|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	BC011476|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044959|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044996|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK079301|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK161141|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK027983|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK037024|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK136125|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK040354|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK167449|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_001113416|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_145506|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chr16_+_92292580_92292633	0.423645	FOXD3.p2	AK008619|Kcne2|246133|potassium voltage-gated channel, Isk-related subfamily, gene 2	NM_134110|Kcne2|246133|potassium voltage-gated channel, Isk-related subfamily, gene 2
mm9_v1_chr7_+_4744521_4744617	0.423455	FOXD3.p2	X74856|Rpl28|19943|ribosomal protein L28	BC086932|Rpl28|19943|ribosomal protein L28	AK012368|Rpl28|19943|ribosomal protein L28	AK018714|Rpl28|19943|ribosomal protein L28	AK076133|Rpl28|19943|ribosomal protein L28	BC092012|Rpl28|19943|ribosomal protein L28	NM_009081|Rpl28|19943|ribosomal protein L28	BC024395|Rpl28|19943|ribosomal protein L28	BC086797|Rpl28|19943|ribosomal protein L28
mm9_v1_chr5_+_53225253_53225293	0.422877	FOXD3.p2	AK166061|Anapc4|52206|anaphase promoting complex subunit 4
mm9_v1_chr1_+_24685556_24685610	0.422084	FOXD3.p2	BC025579|Lmbrd1|68421|LMBR1 domain containing 1	BC031902|Lmbrd1|68421|LMBR1 domain containing 1	AK167080|Lmbrd1|68421|LMBR1 domain containing 1	AK152170|Lmbrd1|68421|LMBR1 domain containing 1	AK153237|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr18_+_32996878_32997001	0.42037	FOXD3.p2	AK156822|Wdr36|225348|WD repeat domain 36	NM_001110015|Wdr36|225348|WD repeat domain 36	NM_001110016|Wdr36|225348|WD repeat domain 36	NM_144863|Wdr36|225348|WD repeat domain 36	AK045396|Wdr36|225348|WD repeat domain 36	BC022132|Wdr36|225348|WD repeat domain 36	BC094453|Wdr36|225348|WD repeat domain 36	AK171683|Wdr36|225348|WD repeat domain 36	AK077545|Wdr36|225348|WD repeat domain 36	AK172377|Wdr36|225348|WD repeat domain 36	AK140019|Wdr36|225348|WD repeat domain 36	AK172054|Wdr36|225348|WD repeat domain 36	AK041763|Wdr36|225348|WD repeat domain 36	BC025809|Wdr36|225348|WD repeat domain 36	AK155965|Wdr36|225348|WD repeat domain 36
mm9_v1_chr12_+_119082333_119082371	0.419497	FOXD3.p2	BC006933|Cdca7l|217946|cell division cycle associated 7 like	NM_146040|Cdca7l|217946|cell division cycle associated 7 like	AK149673|Cdca7l|217946|cell division cycle associated 7 like	BC071198|Cdca7l|217946|cell division cycle associated 7 like
mm9_v1_chr4_-_133101802_133101911	0.419125	FOXD3.p2	Y15522|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	X81443|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	BC011253|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK012777|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK032673|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK012321|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK146323|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)
mm9_v1_chr14_-_104243379_104243389	0.419068	FOXD3.p2	AK083415|Ednrb|13618|endothelin receptor type B	NM_001136061|Ednrb|13618|endothelin receptor type B
mm9_v1_chr13_-_101500801_101500875	0.418523	FOXD3.p2	AK145759|Cdk7|12572|cyclin-dependent kinase 7	U11822|Cdk7|12572|cyclin-dependent kinase 7	BC141043|Cdk7|12572|cyclin-dependent kinase 7	BC004605|Cdk7|12572|cyclin-dependent kinase 7
mm9_v1_chr19_+_3935169_3935313	0.417156	FOXD3.p2	NM_001161428|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	NM_019449|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	BC018388|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK030488|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK039526|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK165060|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK155556|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK162535|Unc93b1|54445|unc-93 homolog B1 (C. elegans)
mm9_v1_chr4_+_57858096_57858154	0.416428	FOXD3.p2	NM_001035532|Akap2|11641|A kinase (PRKA) anchor protein 2	NM_009649|Akap2|11641|A kinase (PRKA) anchor protein 2	AK041873|Akap2|11641|A kinase (PRKA) anchor protein 2	AK147420|Akap2|11641|A kinase (PRKA) anchor protein 2	BC003735|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr4_+_130219299_130219334	0.415707	FOXD3.p2	BC050747|Pum1|80912|pumilio 1 (Drosophila)	AK147185|Pum1|80912|pumilio 1 (Drosophila)	AF321909|Pum1|80912|pumilio 1 (Drosophila)	BC048174|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr16_-_4559511_4559853	0.415666	FOXD3.p2	AK053091|Tcfap4|83383|transcription factor AP4	BC054777|Tcfap4|83383|transcription factor AP4	BC047270|Tcfap4|83383|transcription factor AP4	AF161262|Tcfap4|83383|transcription factor AP4	NM_031182|Tcfap4|83383|transcription factor AP4	AK166424|Tcfap4|83383|transcription factor AP4
mm9_v1_chr11_+_77029770_77029932	0.415535	FOXD3.p2	AB099288|Ssh2|237860|slingshot homolog 2 (Drosophila)	NM_177710|Ssh2|237860|slingshot homolog 2 (Drosophila)	BC141392|Ssh2|237860|slingshot homolog 2 (Drosophila)	BC141393|Ssh2|237860|slingshot homolog 2 (Drosophila)
mm9_v1_chr2_+_51893618_51893676	0.415329	FOXD3.p2	AK139985|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6	NM_009398|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6	U83903|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6	BC021155|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6
mm9_v1_chr12_+_53198729_53198769	0.414723	FOXD3.p2	NM_029760|Nubpl|76826|nucleotide binding protein-like	AK152377|Nubpl|76826|nucleotide binding protein-like	AK083643|Nubpl|76826|nucleotide binding protein-like	BC062175|Nubpl|76826|nucleotide binding protein-like	AK010827|Nubpl|76826|nucleotide binding protein-like	AK141257|Nubpl|76826|nucleotide binding protein-like
mm9_v1_chr13_-_54570167_54570211	0.413932	FOXD3.p2	BC019603|Thoc3|73666|THO complex 3	AK010668|Thoc3|73666|THO complex 3	NM_028597|Thoc3|73666|THO complex 3
mm9_v1_chr13_+_23830671_23830686	0.413734	FOXD3.p2	AK155502|Hist1h1c|50708|histone cluster 1, H1c	BC089604|Hist1h1c|50708|histone cluster 1, H1c	NM_015786|Hist1h1c|50708|histone cluster 1, H1c	AK002321|Hist1h1c|50708|histone cluster 1, H1c
mm9_v1_chr13_-_60278859_60278952	0.41277	FOXD3.p2	NM_008086|Gas1|14451|growth arrest specific 1
mm9_v1_chr12_-_102321911_102321936	0.412163	FOXD3.p2	AK053668|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_001160214|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_211355|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm9_v1_chr12_+_79962998_79963115	0.411853	FOXD3.p2	BC016448|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	BC016497|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	AK143499|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	NM_026114|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	AK167763|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	BC005463|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha
mm9_v1_chr7_-_29123724_29123770	0.409486	FOXD3.p2	AK146583|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK145465|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	BC007132|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	NM_013676|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	U88539|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	BC057449|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK146055|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK146453|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK159786|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK145117|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)
mm9_v1_chr17_+_75578120_75578285	0.409273	FOXD3.p2	AK036047|Ltbp1|268977|latent transforming growth factor beta binding protein 1	NM_206958|Ltbp1|268977|latent transforming growth factor beta binding protein 1	AF280604|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr5_-_92483744_92484066	0.408862	FOXD3.p2	AK169571|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK220349|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr4_+_130219255_130219279	0.407144	FOXD3.p2	AK162742|Pum1|80912|pumilio 1 (Drosophila)	NM_001159603|Pum1|80912|pumilio 1 (Drosophila)	NM_001159604|Pum1|80912|pumilio 1 (Drosophila)	NM_001159605|Pum1|80912|pumilio 1 (Drosophila)	NM_001159606|Pum1|80912|pumilio 1 (Drosophila)	NM_030722|Pum1|80912|pumilio 1 (Drosophila)	AK141921|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr15_+_101914622_101914760	0.406732	FOXD3.p2	AK207103|Eif4b|75705|eukaryotic translation initiation factor 4B	AK180065|Eif4b|75705|eukaryotic translation initiation factor 4B	AK186733|Eif4b|75705|eukaryotic translation initiation factor 4B	AK192567|Eif4b|75705|eukaryotic translation initiation factor 4B	AK210570|Eif4b|75705|eukaryotic translation initiation factor 4B	AK212755|Eif4b|75705|eukaryotic translation initiation factor 4B	AK212975|Eif4b|75705|eukaryotic translation initiation factor 4B	AK213592|Eif4b|75705|eukaryotic translation initiation factor 4B	AK218019|Eif4b|75705|eukaryotic translation initiation factor 4B	AK214822|Eif4b|75705|eukaryotic translation initiation factor 4B	AK203780|Eif4b|75705|eukaryotic translation initiation factor 4B	AK195122|Eif4b|75705|eukaryotic translation initiation factor 4B	AK205492|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr7_-_140315100_140315165	0.405818	FOXD3.p2	NM_009980|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr7_+_30023324_30023364	0.404655	FOXD3.p2	NM_001110201|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	NM_029887|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	BC109331|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	AK135529|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)
mm9_v1_chr2_+_173563060_173563229	0.40212	FOXD3.p2	BC048231|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	NM_019806|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	BC057123|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK050632|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK081908|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AF115504|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK160925|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK172080|Vapb|56491|vesicle-associated membrane protein, associated protein B and C
mm9_v1_chr9_+_96159123_96159160	0.401988	FOXD3.p2	NM_001184709|Tfdp2|211586|transcription factor Dp 2	AK033356|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr18_+_67934517_67934670	0.401037	FOXD3.p2	AK143727|Seh1l|72124|SEH1-like (S. cerevisiae	NM_001039088|Seh1l|72124|SEH1-like (S. cerevisiae	NM_028112|Seh1l|72124|SEH1-like (S. cerevisiae	AK170591|Seh1l|72124|SEH1-like (S. cerevisiae	BC027244|Seh1l|72124|SEH1-like (S. cerevisiae	AK011330|Seh1l|72124|SEH1-like (S. cerevisiae	AK169231|Seh1l|72124|SEH1-like (S. cerevisiae	AK169388|Seh1l|72124|SEH1-like (S. cerevisiae	AK088835|Seh1l|72124|SEH1-like (S. cerevisiae	AK166573|Seh1l|72124|SEH1-like (S. cerevisiae
mm9_v1_chr2_-_72931338_72931457	0.400957	FOXD3.p2	
mm9_v1_chr7_-_112892755_112892902	0.400179	FOXD3.p2	BC031418|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_020024|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK047115|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC080311|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK139383|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr11_+_115626733_115626761	0.399867	FOXD3.p2	NM_028014|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene	AK155233|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr6_-_92431385_92431385	0.399281	FOXD3.p2	AK020123|Prickle2|243548|prickle homolog 2 (Drosophila)	AK032631|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134460|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chrX_-_91457942_91457985	0.39813	FOXD3.p2	BC036993|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AJ006587|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm9_v1_chr7_+_138703898_138703948	0.397	FOXD3.p2	AK088534|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK138004|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	NM_009774|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	U67327|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	BC086790|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK190618|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm9_v1_chr2_+_29643739_29643849	0.3962	FOXD3.p2	BC139373|Coq4|227683|coenzyme Q4 homolog (yeast)	BC145615|Coq4|227683|coenzyme Q4 homolog (yeast)	BC139376|Coq4|227683|coenzyme Q4 homolog (yeast)	AK050459|Coq4|227683|coenzyme Q4 homolog (yeast)	AK039422|Coq4|227683|coenzyme Q4 homolog (yeast)	AK039676|Coq4|227683|coenzyme Q4 homolog (yeast)	NM_178693|Coq4|227683|coenzyme Q4 homolog (yeast)	AK043574|Coq4|227683|coenzyme Q4 homolog (yeast)
mm9_v1_chr13_-_38085986_38086062	0.395962	FOXD3.p2	BC011255|Ssr1|107513|signal sequence receptor, alpha	AK010884|Ssr1|107513|signal sequence receptor, alpha	AK167793|Ssr1|107513|signal sequence receptor, alpha	AK160285|Ssr1|107513|signal sequence receptor, alpha	AF326229|Ssr1|107513|signal sequence receptor, alpha	AF395811|Ssr1|107513|signal sequence receptor, alpha	AY993942|Ssr1|107513|signal sequence receptor, alpha	AK166235|Ssr1|107513|signal sequence receptor, alpha	AK031538|Ssr1|107513|signal sequence receptor, alpha	AB009295|Ssr1|107513|signal sequence receptor, alpha	NM_025965|Ssr1|107513|signal sequence receptor, alpha
mm9_v1_chr7_-_4397194_4397258	0.395483	FOXD3.p2	AK089458|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK034180|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	BC082583|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK028434|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	NM_175372|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)
mm9_v1_chr4_-_124742875_124742900	0.395436	FOXD3.p2	BC118619|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	BC122552|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	AK077109|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	NM_175223|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1
mm9_v1_chr8_+_108583449_108583790	0.395271	FOXD3.p2	NM_010901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK147708|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK155087|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK051602|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK134054|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK039929|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK220187|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120900|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	D85612|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887629|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887630|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887631|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
mm9_v1_chr2_-_118375365_118375421	0.395199	FOXD3.p2	AK040622|Bmf|171543|BCL2 modifying factor	AK169903|Bmf|171543|BCL2 modifying factor	NM_138313|Bmf|171543|BCL2 modifying factor	AK084658|Bmf|171543|BCL2 modifying factor
mm9_v1_chr2_+_103909961_103910022	0.392285	FOXD3.p2	BC038128|Cd59b|333883|CD59b antigen	BC059731|Cd59b|333883|CD59b antigen
mm9_v1_chr19_-_41289262_41289457	0.392028	FOXD3.p2	AK008994|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK159802|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr3_-_88717730_88717876	0.391637	FOXD3.p2	AK163280|Msto1|229524|misato homolog 1 (Drosophila)	BC108354|Msto1|229524|misato homolog 1 (Drosophila)	AK167586|Msto1|229524|misato homolog 1 (Drosophila)	BC008103|Msto1|229524|misato homolog 1 (Drosophila)	AK166834|Msto1|229524|misato homolog 1 (Drosophila)	AK166236|Msto1|229524|misato homolog 1 (Drosophila)	AK170160|Msto1|229524|misato homolog 1 (Drosophila)	AK139708|Msto1|229524|misato homolog 1 (Drosophila)	NM_144898|Msto1|229524|misato homolog 1 (Drosophila)
mm9_v1_chr9_+_75623899_75624064	0.388765	FOXD3.p2	L41145|Bmp5|12160|bone morphogenetic protein 5	BC100751|Bmp5|12160|bone morphogenetic protein 5	BC100752|Bmp5|12160|bone morphogenetic protein 5	BC100753|Bmp5|12160|bone morphogenetic protein 5	BC100754|Bmp5|12160|bone morphogenetic protein 5	AK160412|Bmp5|12160|bone morphogenetic protein 5
mm9_v1_chr10_-_53349752_53349783	0.387427	FOXD3.p2	AK139112|Mcm9|71567|minichromosome maintenance complex component 9	AK046636|Mcm9|71567|minichromosome maintenance complex component 9
mm9_v1_chr16_-_32165509_32165642	0.385213	FOXD3.p2	AK084858|Lrrc33|224109|leucine rich repeat containing 33	AK088770|Lrrc33|224109|leucine rich repeat containing 33	AK128897|Lrrc33|224109|leucine rich repeat containing 33	NM_146069|Lrrc33|224109|leucine rich repeat containing 33	BC027411|Lrrc33|224109|leucine rich repeat containing 33	AK167934|Lrrc33|224109|leucine rich repeat containing 33	AK042502|Lrrc33|224109|leucine rich repeat containing 33
mm9_v1_chr3_+_94926272_94926508	0.383631	FOXD3.p2	
mm9_v1_chr15_+_34167780_34167904	0.383376	FOXD3.p2	NM_033521|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK077933|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	EU561010|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK166014|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK082807|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK146868|Laptm4b|114128|lysosomal-associated protein transmembrane 4B
mm9_v1_chr5_-_38215607_38215829	0.383006	FOXD3.p2	AF308572|Msx1|17701|homeobox, msh-like 1	X14759|Msx1|17701|homeobox, msh-like 1	X59251|Msx1|17701|homeobox, msh-like 1	BC016426|Msx1|17701|homeobox, msh-like 1	AK077524|Msx1|17701|homeobox, msh-like 1	AK145726|Msx1|17701|homeobox, msh-like 1	AK078600|Msx1|17701|homeobox, msh-like 1	NM_010835|Msx1|17701|homeobox, msh-like 1
mm9_v1_chr5_+_117724658_117724663	0.382738	FOXD3.p2	AK013486|Taok3|330177|TAO kinase 3
mm9_v1_chr4_-_6381384_6381409	0.382272	FOXD3.p2	BC066075|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	BC082810|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AK049887|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AF013632|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor
mm9_v1_chr3_-_146432922_146432972	0.380722	FOXD3.p2	AK139419|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr15_+_76173936_76173991	0.378928	FOXD3.p2	AK011288|Cyc1|66445|cytochrome c-1	NM_025567|Cyc1|66445|cytochrome c-1	AK151299|Cyc1|66445|cytochrome c-1	AK170272|Cyc1|66445|cytochrome c-1	BC005620|Cyc1|66445|cytochrome c-1	AK002815|Cyc1|66445|cytochrome c-1	BC082790|Cyc1|66445|cytochrome c-1
mm9_v1_chr19_+_41557475_41557518	0.378924	FOXD3.p2	AK041621|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr19_-_5964121_5964180	0.378508	FOXD3.p2	BC064795|Pola2|18969|polymerase (DNA directed), alpha 2	D13546|Pola2|18969|polymerase (DNA directed), alpha 2	AK150099|Pola2|18969|polymerase (DNA directed), alpha 2	BC006945|Pola2|18969|polymerase (DNA directed), alpha 2	AK045325|Pola2|18969|polymerase (DNA directed), alpha 2	AK152974|Pola2|18969|polymerase (DNA directed), alpha 2	AK153081|Pola2|18969|polymerase (DNA directed), alpha 2	AK163733|Pola2|18969|polymerase (DNA directed), alpha 2	BC021424|Pola2|18969|polymerase (DNA directed), alpha 2
mm9_v1_chr6_-_114987860_114987905	0.378012	FOXD3.p2	AK160774|1500001M20Rik|68971|RIKEN cDNA 1500001M20 gene	NM_026894|1500001M20Rik|68971|RIKEN cDNA 1500001M20 gene	AK005100|1500001M20Rik|68971|RIKEN cDNA 1500001M20 gene
mm9_v1_chr4_-_6381171_6381368	0.377871	FOXD3.p2	AK134518|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	BC145961|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	BC145963|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AK147709|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor
mm9_v1_chr18_-_64648683_64648745	0.377739	FOXD3.p2	AK083560|Fech|14151|ferrochelatase	BC094548|Fech|14151|ferrochelatase	M61215|Fech|14151|ferrochelatase	AK004718|Fech|14151|ferrochelatase	NM_007998|Fech|14151|ferrochelatase	AK018738|Fech|14151|ferrochelatase	AK150685|Fech|14151|ferrochelatase
mm9_v1_chr2_+_146681579_146681639	0.376541	FOXD3.p2	BC150844|Plk1s1|228730|polo-like kinase 1 substrate 1	BC150845|Plk1s1|228730|polo-like kinase 1 substrate 1	AK135486|Plk1s1|228730|polo-like kinase 1 substrate 1	NM_001033298|Plk1s1|228730|polo-like kinase 1 substrate 1
mm9_v1_chr8_+_86239131_86239208	0.375888	FOXD3.p2	AK146294|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK145927|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK150997|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK172448|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK012002|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK016960|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK149475|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK151395|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK152394|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK137114|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	BC020134|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK164289|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK168079|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK167890|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm9_v1_chr4_+_125773958_125773995	0.375223	FOXD3.p2	AK143443|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	BC026476|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	BC024543|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10
mm9_v1_chr1_+_174078297_174078312	0.37473	FOXD3.p2	BC078641|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chr3_+_41368801_41368825	0.374526	FOXD3.p2	NM_001130186|Phf17|269424|PHD finger protein 17
mm9_v1_chr4_+_44313865_44313931	0.374139	FOXD3.p2	AK167457|Melk|17279|maternal embryonic leucine zipper kinase	AK145316|Melk|17279|maternal embryonic leucine zipper kinase	AK208560|Melk|17279|maternal embryonic leucine zipper kinase
mm9_v1_chr5_-_111239017_111239099	0.373842	FOXD3.p2	BC059835|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	AK148317|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	AK156534|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	BC057121|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	NM_009469|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)
mm9_v1_chr2_+_154262114_154262265	0.373405	FOXD3.p2	AK148027|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_009823|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_172860|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK040403|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	DQ213025|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC064679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK049206|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chr9_-_64020685_64020737	0.373111	FOXD3.p2	BC027435|Zwilch|68014|Zwilch, kinetochore associated, homolog (Drosophila)	AK050917|Zwilch|68014|Zwilch, kinetochore associated, homolog (Drosophila)	AK009559|Zwilch|68014|Zwilch, kinetochore associated, homolog (Drosophila)	AK019825|Zwilch|68014|Zwilch, kinetochore associated, homolog (Drosophila)	AK012004|Zwilch|68014|Zwilch, kinetochore associated, homolog (Drosophila)	NM_026507|Zwilch|68014|Zwilch, kinetochore associated, homolog (Drosophila)
mm9_v1_chr5_+_108890247_108890362	0.372393	FOXD3.p2	AK033609|Pcgf3|69587|polycomb group ring finger 3	AK085574|Pcgf3|69587|polycomb group ring finger 3	AK089091|Pcgf3|69587|polycomb group ring finger 3	NM_172716|Pcgf3|69587|polycomb group ring finger 3
mm9_v1_chr13_+_99124196_99124209	0.371233	FOXD3.p2	AK164408|Foxd1|15229|forkhead box D1	AK142034|Foxd1|15229|forkhead box D1	AK132390|Foxd1|15229|forkhead box D1	AK142838|Foxd1|15229|forkhead box D1	NM_008242|Foxd1|15229|forkhead box D1	L38607|Foxd1|15229|forkhead box D1
mm9_v1_chr5_-_108304062_108304125	0.370306	FOXD3.p2	AK165332|Evi5|14020|ecotropic viral integration site 5	BC030056|Evi5|14020|ecotropic viral integration site 5	NM_007964|Evi5|14020|ecotropic viral integration site 5	U53586|Evi5|14020|ecotropic viral integration site 5
mm9_v1_chr8_+_98057984_98058038	0.369182	FOXD3.p2	AK077130|Ccdc113|244608|coiled-coil domain containing 113	NM_172914|Ccdc113|244608|coiled-coil domain containing 113	BC060957|Ccdc113|244608|coiled-coil domain containing 113	BC048506|Ccdc113|244608|coiled-coil domain containing 113
mm9_v1_chr5_-_106887469_106887485	0.369	FOXD3.p2	BC055789|Barhl2|104382|BarH-like 2 (Drosophila)
mm9_v1_chr5_-_130731280_130731426	0.36795	FOXD3.p2	AK005079|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK019228|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK168847|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	BC003849|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	NM_023248|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK014648|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	X99668|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)
mm9_v1_chr16_+_20672770_20672837	0.362524	FOXD3.p2	AK081982|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_001005331|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_145941|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr4_-_58999931_58999958	0.36155	FOXD3.p2	BC014865|Ptgr1|67103|prostaglandin reductase 1	AK035425|Ptgr1|67103|prostaglandin reductase 1	AK166835|Ptgr1|67103|prostaglandin reductase 1	NM_025968|Ptgr1|67103|prostaglandin reductase 1
mm9_v1_chr11_-_70465629_70465690	0.361109	FOXD3.p2	AJ279848|Pfn1|18643|profilin 1
mm9_v1_chr18_-_32719516_32719687	0.360987	FOXD3.p2	AK002769|Gypc|71683|glycophorin C	AK082930|Gypc|71683|glycophorin C	AK152607|Gypc|71683|glycophorin C	AK159730|Gypc|71683|glycophorin C	BC027408|Gypc|71683|glycophorin C	AK089652|Gypc|71683|glycophorin C	AY234183|Gypc|71683|glycophorin C	NM_001048207|Gypc|71683|glycophorin C
mm9_v1_chr4_-_3865501_3865606	0.360522	FOXD3.p2	BC139283|Plag1|56711|pleiomorphic adenoma gene 1	BC139285|Plag1|56711|pleiomorphic adenoma gene 1	AY574219|Plag1|56711|pleiomorphic adenoma gene 1	AK044405|Plag1|56711|pleiomorphic adenoma gene 1	NM_019969|Plag1|56711|pleiomorphic adenoma gene 1
mm9_v1_chr1_-_167932735_167932770	0.35962	FOXD3.p2	X68363|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68362|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489477|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489478|Pou2f1|18986|POU domain, class 2, transcription factor 1	BC066201|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68364|Pou2f1|18986|POU domain, class 2, transcription factor 1	AF508939|Pou2f1|18986|POU domain, class 2, transcription factor 1	AY177625|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK044830|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK028237|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_011137|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198932|Pou2f1|18986|POU domain, class 2, transcription factor 1
mm9_v1_chr2_+_73110010_73110058	0.359412	FOXD3.p2	BC139398|Sp9|381373|trans-acting transcription factor 9	BC139407|Sp9|381373|trans-acting transcription factor 9
mm9_v1_chr4_-_19497166_19497254	0.358378	FOXD3.p2	BC036983|Cpne3|70568|copine III	AK220348|Cpne3|70568|copine III	AK146324|Cpne3|70568|copine III	AK017357|Cpne3|70568|copine III	AK036664|Cpne3|70568|copine III	NM_027769|Cpne3|70568|copine III	AK017651|Cpne3|70568|copine III
mm9_v1_chr13_+_23830944_23831229	0.358324	FOXD3.p2	AK135614|Hist1h1c|50708|histone cluster 1, H1c	AK209931|Hist1h1c|50708|histone cluster 1, H1c	AK211271|Hist1h1c|50708|histone cluster 1, H1c	AK210230|Hist1h1c|50708|histone cluster 1, H1c
mm9_v1_chr9_-_70351520_70351611	0.358184	FOXD3.p2	AK171932|Rnf111|93836|ring finger 111	AF330197|Rnf111|93836|ring finger 111	NM_033604|Rnf111|93836|ring finger 111
mm9_v1_chr14_+_55506625_55506792	0.357526	FOXD3.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr3_+_54916015_54916063	0.356542	FOXD3.p2	AK159951|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	NM_001144988|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	NM_144895|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	AK129171|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	BC022921|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	AK087388|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm9_v1_chr1_+_158769044_158769153	0.356408	FOXD3.p2	AK142319|Angptl1|72713|angiopoietin-like 1	AK012888|Angptl1|72713|angiopoietin-like 1	BC082563|Angptl1|72713|angiopoietin-like 1	NM_028333|Angptl1|72713|angiopoietin-like 1
mm9_v1_chr8_+_109206967_109207060	0.355715	FOXD3.p2	AK085030|Tmco7|272538|transmembrane and coiled-coil domains 7	NM_173037|Tmco7|272538|transmembrane and coiled-coil domains 7	AK077757|Tmco7|272538|transmembrane and coiled-coil domains 7	AK054283|Tmco7|272538|transmembrane and coiled-coil domains 7	BC066134|Tmco7|272538|transmembrane and coiled-coil domains 7	BC066869|Tmco7|272538|transmembrane and coiled-coil domains 7	BC069838|Tmco7|272538|transmembrane and coiled-coil domains 7	AK076373|Tmco7|272538|transmembrane and coiled-coil domains 7	AK173250|Tmco7|272538|transmembrane and coiled-coil domains 7
mm9_v1_chr9_+_55388955_55389013	0.355541	FOXD3.p2	NM_027397|Isl2|104360|insulin related protein 2 (islet 2)	AK013964|Isl2|104360|insulin related protein 2 (islet 2)	BC120880|Isl2|104360|insulin related protein 2 (islet 2)	BC148307|Isl2|104360|insulin related protein 2 (islet 2)
mm9_v1_chr11_+_101489262_101489282	0.355378	FOXD3.p2	AK010457|Rdm1|66599|RAD52 motif 1	NM_025654|Rdm1|66599|RAD52 motif 1	BC055013|Rdm1|66599|RAD52 motif 1	AK003135|Rdm1|66599|RAD52 motif 1	BC026811|Rdm1|66599|RAD52 motif 1
mm9_v1_chr6_-_122560002_122560015	0.354285	FOXD3.p2	BC103565|Gdf3|14562|growth differentiation factor 3	BC101963|Gdf3|14562|growth differentiation factor 3	BC101964|Gdf3|14562|growth differentiation factor 3	BC101965|Gdf3|14562|growth differentiation factor 3	AK082877|Gdf3|14562|growth differentiation factor 3	AK146174|Gdf3|14562|growth differentiation factor 3	AK167962|Gdf3|14562|growth differentiation factor 3
mm9_v1_chr11_-_58615400_58615517	0.35413	FOXD3.p2	FJ468008|Fam183b|75429|family with sequence similarity 183, member B	BC094630|Fam183b|75429|family with sequence similarity 183, member B	BC061254|Fam183b|75429|family with sequence similarity 183, member B	BC048748|Fam183b|75429|family with sequence similarity 183, member B	AK157972|Fam183b|75429|family with sequence similarity 183, member B	AK013920|Fam183b|75429|family with sequence similarity 183, member B	NM_001162878|Fam183b|75429|family with sequence similarity 183, member B	NM_029283|Fam183b|75429|family with sequence similarity 183, member B	BC126964|Fam183b|75429|family with sequence similarity 183, member B	BC117741|Fam183b|75429|family with sequence similarity 183, member B
mm9_v1_chr15_-_82169203_82169306	0.352067	FOXD3.p2	AF079458|Naga|17939|N-acetyl galactosaminidase, alpha	AK133576|Naga|17939|N-acetyl galactosaminidase, alpha	BC021631|Naga|17939|N-acetyl galactosaminidase, alpha	AK077116|Naga|17939|N-acetyl galactosaminidase, alpha	AK153002|Naga|17939|N-acetyl galactosaminidase, alpha	NM_008669|Naga|17939|N-acetyl galactosaminidase, alpha
mm9_v1_chr5_-_93611701_93611836	0.351715	FOXD3.p2	
mm9_v1_chrX_+_102275071_102275146	0.350847	FOXD3.p2	AK007655|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	AK030507|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	AK076889|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	NM_026312|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	BC035042|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	AK011610|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	BC061070|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene	BC044719|2610029G23Rik|67683|RIKEN cDNA 2610029G23 gene
mm9_v1_chr6_-_128388673_128388715	0.350251	FOXD3.p2	AK051433|Fkbp4|14228|FK506 binding protein 4	AK159211|Fkbp4|14228|FK506 binding protein 4
mm9_v1_chr5_-_54098762_54098942	0.349348	FOXD3.p2	BC020534|Cckar|12425|cholecystokinin A receptor	AK143895|Cckar|12425|cholecystokinin A receptor	AK004730|Cckar|12425|cholecystokinin A receptor	AK146738|Cckar|12425|cholecystokinin A receptor	AK147052|Cckar|12425|cholecystokinin A receptor	NM_009827|Cckar|12425|cholecystokinin A receptor
mm9_v1_chr13_-_96661704_96661910	0.34766	FOXD3.p2	BC094939|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC052916|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK080384|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK147360|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC150958|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK142813|Iqgap2|544963|IQ motif containing GTPase activating protein 2	NM_027711|Iqgap2|544963|IQ motif containing GTPase activating protein 2
mm9_v1_chr6_-_122560022_122560104	0.347116	FOXD3.p2	S52658|Gdf3|14562|growth differentiation factor 3	AK160533|Gdf3|14562|growth differentiation factor 3	AK152457|Gdf3|14562|growth differentiation factor 3	NM_008108|Gdf3|14562|growth differentiation factor 3	L06443|Gdf3|14562|growth differentiation factor 3
mm9_v1_chr5_-_52957518_52957569	0.346641	FOXD3.p2	NM_144945|Lgi2|246316|leucine-rich repeat LGI family, member 2	AJ487515|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr14_+_48092235_48092236	0.346092	FOXD3.p2	AK020018|Fbxo34|78938|F-box protein 34	NM_001146085|Fbxo34|78938|F-box protein 34	NM_001146086|Fbxo34|78938|F-box protein 34	NM_030236|Fbxo34|78938|F-box protein 34
mm9_v1_chr11_+_28753190_28753243	0.345873	FOXD3.p2	AK077302|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	NM_146015|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	AY251056|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr14_-_55136145_55136306	0.345872	FOXD3.p2	AK186126|Prmt5|27374|protein arginine N-methyltransferase 5	AF167573|Prmt5|27374|protein arginine N-methyltransferase 5	AK076346|Prmt5|27374|protein arginine N-methyltransferase 5	AK132414|Prmt5|27374|protein arginine N-methyltransferase 5	AK165165|Prmt5|27374|protein arginine N-methyltransferase 5	BC023905|Prmt5|27374|protein arginine N-methyltransferase 5	AK084106|Prmt5|27374|protein arginine N-methyltransferase 5	NM_013768|Prmt5|27374|protein arginine N-methyltransferase 5
mm9_v1_chr1_+_43502537_43502605	0.344678	FOXD3.p2	AK051665|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	NM_010879|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	AK014949|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2
mm9_v1_chr10_-_129717244_129717295	0.343953	FOXD3.p2	BC042639|Neurod4|11923|neurogenic differentiation 4	AK012183|Neurod4|11923|neurogenic differentiation 4	BC054391|Neurod4|11923|neurogenic differentiation 4	NM_007501|Neurod4|11923|neurogenic differentiation 4
mm9_v1_chr4_-_43512476_43512545	0.343345	FOXD3.p2	AK087493|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	BC080700|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	AK153880|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	NM_001013377|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene
mm9_v1_chr3_+_82859422_82859482	0.343042	FOXD3.p2	AK080068|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK077197|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	NM_016784|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK075993|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK076007|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chr15_-_42508294_42508522	0.342823	FOXD3.p2	U83509|Angpt1|11600|angiopoietin 1	BC067410|Angpt1|11600|angiopoietin 1	NM_009640|Angpt1|11600|angiopoietin 1	AK172868|Angpt1|11600|angiopoietin 1	AK012027|Angpt1|11600|angiopoietin 1	AK088439|Angpt1|11600|angiopoietin 1
mm9_v1_chr19_+_26822892_26822948	0.3419	FOXD3.p2	NM_026003|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK011935|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr7_-_97129450_97129518	0.341324	FOXD3.p2	BC012966|Eed|13626|embryonic ectoderm development	U78103|Eed|13626|embryonic ectoderm development	NM_021876|Eed|13626|embryonic ectoderm development	U97675|Eed|13626|embryonic ectoderm development
mm9_v1_chr15_+_3220766_3220979	0.341026	FOXD3.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr1_-_176851949_176851953	0.338768	FOXD3.p2	AB011030|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	NM_011825|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	AK142008|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr1_-_66909822_66909954	0.337279	FOXD3.p2	U21489|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	BC027412|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	AK005140|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	NM_007381|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	AK151845|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	AK167537|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain
mm9_v1_chr2_+_87366184_87366358	0.335462	FOXD3.p2	BC090254|Srp9|27058|signal recognition particle 9
mm9_v1_chr19_-_47389240_47389295	0.334046	FOXD3.p2	AK085227|Sh3pxd2a|14218|SH3 and PX domains 2A
mm9_v1_chr11_-_40546863_40546938	0.332694	FOXD3.p2	AK163410|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)	AF079222|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)	AK020144|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)	AK164410|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)	BC021427|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)	AK041617|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)	AK164597|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)	AF031932|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)	AK143123|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)	NM_013552|Hmmr|15366|hyaluronan mediated motility receptor (RHAMM)
mm9_v1_chr13_-_25112189_25112247	0.33248	FOXD3.p2	NM_001013389|Mrs2|380836|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)
mm9_v1_chr1_-_38109910_38110011	0.331563	FOXD3.p2	AK003934|Rev1|56210|REV1 homolog (S. cerevisiae)
mm9_v1_chr5_-_5265981_5266073	0.331318	FOXD3.p2	AK083269|Cdk14|18647|cyclin-dependent kinase 14	AK139386|Cdk14|18647|cyclin-dependent kinase 14	BC068134|Cdk14|18647|cyclin-dependent kinase 14	AK138437|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr11_+_98769122_98769151	0.331074	FOXD3.p2	AK166003|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)
mm9_v1_chr2_+_34262399_34262511	0.329919	FOXD3.p2	BC043296|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr4_+_108520389_108520516	0.32961	FOXD3.p2	BC021493|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK003197|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	NM_029571|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK148185|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK150178|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK156755|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)
mm9_v1_chr15_-_102181072_102181189	0.328993	FOXD3.p2	AK134406|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK034591|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	BC018191|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK083401|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK166118|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK165243|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK088247|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK083537|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK079849|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	BC025501|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK169523|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK087134|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	NM_153416|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia
mm9_v1_chr3_-_107949028_107949092	0.328379	FOXD3.p2	AK077490|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	NM_010306|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	BC020009|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK169285|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK004566|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm9_v1_chr13_-_23714425_23714427	0.328055	FOXD3.p2	BC089600|Hist1h1e|50709|histone cluster 1, H1e	NM_015787|Hist1h1e|50709|histone cluster 1, H1e
mm9_v1_chrX_+_156278399_156278494	0.327036	FOXD3.p2	AK028299|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_001135728|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr4_+_6292817_6292904	0.326662	FOXD3.p2	AK169415|Sdcbp|53378|syndecan binding protein	NM_001098227|Sdcbp|53378|syndecan binding protein	NM_016807|Sdcbp|53378|syndecan binding protein	AK033412|Sdcbp|53378|syndecan binding protein	AF003693|Sdcbp|53378|syndecan binding protein	AK150721|Sdcbp|53378|syndecan binding protein	AK152080|Sdcbp|53378|syndecan binding protein	AK159677|Sdcbp|53378|syndecan binding protein	AK150623|Sdcbp|53378|syndecan binding protein	AK152552|Sdcbp|53378|syndecan binding protein	AK153112|Sdcbp|53378|syndecan binding protein	AK169219|Sdcbp|53378|syndecan binding protein	AK045668|Sdcbp|53378|syndecan binding protein	AK168004|Sdcbp|53378|syndecan binding protein	AK028429|Sdcbp|53378|syndecan binding protein	AK146085|Sdcbp|53378|syndecan binding protein	AK150544|Sdcbp|53378|syndecan binding protein	AK150996|Sdcbp|53378|syndecan binding protein	AK151050|Sdcbp|53378|syndecan binding protein	AK152017|Sdcbp|53378|syndecan binding protein	AK152434|Sdcbp|53378|syndecan binding protein	AK153042|Sdcbp|53378|syndecan binding protein	AK159538|Sdcbp|53378|syndecan binding protein	AK169687|Sdcbp|53378|syndecan binding protein	AK171162|Sdcbp|53378|syndecan binding protein	AK150707|Sdcbp|53378|syndecan binding protein	AK152001|Sdcbp|53378|syndecan binding protein	AK152577|Sdcbp|53378|syndecan binding protein	AK152855|Sdcbp|53378|syndecan binding protein	AK152109|Sdcbp|53378|syndecan binding protein	AK150801|Sdcbp|53378|syndecan binding protein	AK014678|Sdcbp|53378|syndecan binding protein	AK150321|Sdcbp|53378|syndecan binding protein	AK150661|Sdcbp|53378|syndecan binding protein	AK150736|Sdcbp|53378|syndecan binding protein	AK159124|Sdcbp|53378|syndecan binding protein	AK165657|Sdcbp|53378|syndecan binding protein	AK167513|Sdcbp|53378|syndecan binding protein	AK168777|Sdcbp|53378|syndecan binding protein	BC019400|Sdcbp|53378|syndecan binding protein	AK150278|Sdcbp|53378|syndecan binding protein	AF077527|Sdcbp|53378|syndecan binding protein	AK159323|Sdcbp|53378|syndecan binding protein
mm9_v1_chr13_+_23844213_23844248	0.325194	FOXD3.p2	NM_178203|Hist1h3b|319150|histone cluster 1, H3b
mm9_v1_chr3_+_82859489_82859512	0.325172	FOXD3.p2	BC006750|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	BC052895|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chrX_-_7651846_7651885	0.324947	FOXD3.p2	AK139757|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK169592|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	NM_011514|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)
mm9_v1_chr2_+_172847371_172847458	0.323807	FOXD3.p2	AK166609|Rbm38|56190|RNA binding motif protein 38	NM_019547|Rbm38|56190|RNA binding motif protein 38	BC006687|Rbm38|56190|RNA binding motif protein 38	AK162141|Rbm38|56190|RNA binding motif protein 38	AK146026|Rbm38|56190|RNA binding motif protein 38	AK172625|Rbm38|56190|RNA binding motif protein 38	BC085307|Rbm38|56190|RNA binding motif protein 38
mm9_v1_chr11_-_116711485_116711487	0.323201	FOXD3.p2	
mm9_v1_chr5_-_137462712_137462731	0.322487	FOXD3.p2	BC026751|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr6_+_134961629_134961652	0.321825	FOXD3.p2	NM_026360|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK010310|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132242|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132244|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK076982|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC060168|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC095944|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm9_v1_chr5_+_32761610_32761706	0.321545	FOXD3.p2	AK004686|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	M27073|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK160743|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	BC046832|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168512|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK088893|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr8_-_81344956_81345026	0.321452	FOXD3.p2	BC099484|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC098230|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC030427|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK141884|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK078392|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK161686|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK019126|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr6_-_136765642_136765708	0.321104	FOXD3.p2	BC104145|Wbp11|60321|WW domain binding protein 11
mm9_v1_chr11_-_107050573_107050694	0.320573	FOXD3.p2	BC024874|Nol11|68979|nucleolar protein 11	AK005123|Nol11|68979|nucleolar protein 11	AK038696|Nol11|68979|nucleolar protein 11	AK078524|Nol11|68979|nucleolar protein 11	AK157743|Nol11|68979|nucleolar protein 11	AK076704|Nol11|68979|nucleolar protein 11	NM_001161329|Nol11|68979|nucleolar protein 11	NM_133702|Nol11|68979|nucleolar protein 11
mm9_v1_chr6_-_51416921_51416984	0.320236	FOXD3.p2	BC059107|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr15_-_75751888_75752008	0.319947	FOXD3.p2	BC026536|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK013214|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK002912|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK012519|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK019237|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK004291|Pycrl|66194|pyrroline-5-carboxylate reductase-like	NM_025412|Pycrl|66194|pyrroline-5-carboxylate reductase-like
mm9_v1_chr7_+_31093768_31093831	0.319201	FOXD3.p2	NM_198027|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK082058|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	BC029805|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK170861|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)
mm9_v1_chr15_-_96886327_96886398	0.318544	FOXD3.p2	AK164292|Slc38a4|69354|solute carrier family 38, member 4	AK167539|Slc38a4|69354|solute carrier family 38, member 4	AK051023|Slc38a4|69354|solute carrier family 38, member 4	NM_027052|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr16_+_10412017_10412067	0.318529	FOXD3.p2	NM_011955|Nubp1|26425|nucleotide binding protein 1	AK157212|Nubp1|26425|nucleotide binding protein 1	BC031430|Nubp1|26425|nucleotide binding protein 1	BC055436|Nubp1|26425|nucleotide binding protein 1	AK020876|Nubp1|26425|nucleotide binding protein 1	BC047926|Nubp1|26425|nucleotide binding protein 1	AF114170|Nubp1|26425|nucleotide binding protein 1
mm9_v1_chr5_+_124933122_124933232	0.316648	FOXD3.p2	AK039064|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	BC043031|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	BC058361|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	NM_029532|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	AK018232|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)
mm9_v1_chr10_-_75931585_75931614	0.316208	FOXD3.p2	AK037727|Ybey|216119|ybeY metallopeptidase	AK051909|Ybey|216119|ybeY metallopeptidase	AK136543|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr2_-_154198449_154198468	0.315434	FOXD3.p2	AK010081|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK010097|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	NM_025876|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK088517|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK136570|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1
mm9_v1_chr15_+_102289600_102289666	0.314802	FOXD3.p2	NM_001170911|Prr13|66151|proline rich 13	NM_025385|Prr13|66151|proline rich 13	AK003850|Prr13|66151|proline rich 13	AK002430|Prr13|66151|proline rich 13	AK008894|Prr13|66151|proline rich 13	AK154583|Prr13|66151|proline rich 13	BC016234|Prr13|66151|proline rich 13	AK181585|Prr13|66151|proline rich 13
mm9_v1_chr10_+_42481347_42481484	0.313779	FOXD3.p2	AK090248|Sec63|140740|SEC63-like (S. cerevisiae)	BC080810|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr2_+_30808463_30808542	0.313266	FOXD3.p2	AK054404|Tor1b|30934|torsin family 1, member B	AK169692|Tor1b|30934|torsin family 1, member B	AK017290|Tor1b|30934|torsin family 1, member B	AK149754|Tor1b|30934|torsin family 1, member B	AJ297743|Tor1b|30934|torsin family 1, member B	NM_133673|Tor1b|30934|torsin family 1, member B	BC018456|Tor1b|30934|torsin family 1, member B	AK159843|Tor1b|30934|torsin family 1, member B
mm9_v1_chr11_+_75578120_75578179	0.312334	FOXD3.p2	AK218111|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK180909|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr2_-_151805846_151805913	0.310813	FOXD3.p2	AK017381|Fam110a|73847|family with sequence similarity 110, member A	BC034240|Fam110a|73847|family with sequence similarity 110, member A	AK154171|Fam110a|73847|family with sequence similarity 110, member A	BC094463|Fam110a|73847|family with sequence similarity 110, member A	AK050928|Fam110a|73847|family with sequence similarity 110, member A	AK080248|Fam110a|73847|family with sequence similarity 110, member A
mm9_v1_chr1_-_180267913_180267920	0.310636	FOXD3.p2	AK165844|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	NM_016805|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK089058|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK145682|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK159614|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK167200|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK145499|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK162264|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr12_+_74224693_74224793	0.310366	FOXD3.p2	AK048499|Mnat1|17420|menage a trois 1	AK155859|Mnat1|17420|menage a trois 1	NM_008612|Mnat1|17420|menage a trois 1	AK008249|Mnat1|17420|menage a trois 1	BC089023|Mnat1|17420|menage a trois 1	BC115630|Mnat1|17420|menage a trois 1	BC115631|Mnat1|17420|menage a trois 1	AK157721|Mnat1|17420|menage a trois 1	AK008134|Mnat1|17420|menage a trois 1	AK053621|Mnat1|17420|menage a trois 1	AK011833|Mnat1|17420|menage a trois 1	AK029174|Mnat1|17420|menage a trois 1
mm9_v1_chr7_-_134160864_134160869	0.309722	FOXD3.p2	BC003932|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene	NM_030240|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr7_-_77511242_77511282	0.309223	FOXD3.p2	AK012573|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK012322|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr2_+_172825651_172825682	0.308801	FOXD3.p2	AK146058|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK156681|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK014325|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK035278|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr10_+_11001072_11001225	0.308773	FOXD3.p2	NM_027968|Fbxo30|71865|F-box protein 30	AK083479|Fbxo30|71865|F-box protein 30	AK135274|Fbxo30|71865|F-box protein 30
mm9_v1_chr13_+_93125151_93125213	0.308053	FOXD3.p2	L26316|Dhfr|13361|dihydrofolate reductase	BC005796|Dhfr|13361|dihydrofolate reductase	X56066|Dhfr|13361|dihydrofolate reductase	M10722|Dhfr|13361|dihydrofolate reductase
mm9_v1_chr10_-_14425271_14425365	0.307843	FOXD3.p2	AK009227|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	BC026752|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK002611|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	NM_025418|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK003213|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK004323|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)
mm9_v1_chr6_-_48658211_48658242	0.307737	FOXD3.p2	AK030902|Gimap6|231931|GTPase, IMAP family member 6	AK087275|Gimap6|231931|GTPase, IMAP family member 6	AF503921|Gimap6|231931|GTPase, IMAP family member 6	NM_153175|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr15_+_25682945_25682960	0.307079	FOXD3.p2	AK161653|Myo10|17909|myosin X
mm9_v1_chr11_+_114529837_114529938	0.306949	FOXD3.p2	AB037665|Rpl38|67671|ribosomal protein L38	NM_001048057|Rpl38|67671|ribosomal protein L38	NM_023372|Rpl38|67671|ribosomal protein L38	AK002659|Rpl38|67671|ribosomal protein L38	AK010518|Rpl38|67671|ribosomal protein L38	AK012391|Rpl38|67671|ribosomal protein L38	BC055346|Rpl38|67671|ribosomal protein L38	BC034339|Rpl38|67671|ribosomal protein L38	AK010277|Rpl38|67671|ribosomal protein L38	AK151517|Rpl38|67671|ribosomal protein L38	BC047046|Rpl38|67671|ribosomal protein L38
mm9_v1_chr7_-_87516011_87516144	0.30672	FOXD3.p2	AK044028|Man2a2|140481|mannosidase 2, alpha 2	NM_172903|Man2a2|140481|mannosidase 2, alpha 2	AK029913|Man2a2|140481|mannosidase 2, alpha 2
mm9_v1_chr2_+_21127350_21127413	0.306656	FOXD3.p2	AK029518|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_001001297|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_177588|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK083895|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK033465|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK087148|Thnsl1|208967|threonine synthase-like 1 (bacterial)
mm9_v1_chr7_+_107789414_107789679	0.306258	FOXD3.p2	AK191812|Rab6|19346|RAB6, member RAS oncogene family
mm9_v1_chr4_-_11181335_11181349	0.306198	FOXD3.p2	BC049092|Ints8|72656|integrator complex subunit 8	BC057618|Ints8|72656|integrator complex subunit 8
mm9_v1_chr2_-_84614976_84615011	0.305133	FOXD3.p2	AK165744|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	AK144292|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm9_v1_chr19_-_8860725_8860906	0.304493	FOXD3.p2	BC028647|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK144881|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	BC020299|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	NM_146092|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK077149|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	NM_001177798|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
mm9_v1_chr3_-_49561168_49561243	0.304289	FOXD3.p2	AF416735|Pcdh18|73173|protocadherin 18	AK173204|Pcdh18|73173|protocadherin 18	BC052198|Pcdh18|73173|protocadherin 18	AK036560|Pcdh18|73173|protocadherin 18	AK032820|Pcdh18|73173|protocadherin 18	NM_130448|Pcdh18|73173|protocadherin 18
mm9_v1_chr4_-_139388882_139388882	0.303626	FOXD3.p2	AF254422|Pax7|18509|paired box gene 7	NM_011039|Pax7|18509|paired box gene 7
mm9_v1_chr16_+_27388907_27389196	0.303297	FOXD3.p2	BC144895|Ccdc50|67501|coiled-coil domain containing 50	BC144898|Ccdc50|67501|coiled-coil domain containing 50	BC145933|Ccdc50|67501|coiled-coil domain containing 50	BC145935|Ccdc50|67501|coiled-coil domain containing 50	NM_001025615|Ccdc50|67501|coiled-coil domain containing 50	NM_026202|Ccdc50|67501|coiled-coil domain containing 50	AK162434|Ccdc50|67501|coiled-coil domain containing 50	AK016827|Ccdc50|67501|coiled-coil domain containing 50	AK151672|Ccdc50|67501|coiled-coil domain containing 50	AK147820|Ccdc50|67501|coiled-coil domain containing 50	AK077557|Ccdc50|67501|coiled-coil domain containing 50	AK165214|Ccdc50|67501|coiled-coil domain containing 50	AK012190|Ccdc50|67501|coiled-coil domain containing 50	AJ534985|Ccdc50|67501|coiled-coil domain containing 50
mm9_v1_chr14_+_56097682_56097776	0.302878	FOXD3.p2	AB045132|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	AK018788|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	AK146988|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	BC003484|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4
mm9_v1_chr3_+_121160714_121160815	0.302675	FOXD3.p2	AK181356|Cnn3|71994|calponin 3, acidic
mm9_v1_chr15_-_81230036_81230148	0.302135	FOXD3.p2	AK150686|St13|70356|suppression of tumorigenicity 13	AK151631|St13|70356|suppression of tumorigenicity 13	AK159149|St13|70356|suppression of tumorigenicity 13	AK013981|St13|70356|suppression of tumorigenicity 13	AK154658|St13|70356|suppression of tumorigenicity 13	AK146528|St13|70356|suppression of tumorigenicity 13	AK152270|St13|70356|suppression of tumorigenicity 13	BC003843|St13|70356|suppression of tumorigenicity 13	NM_133726|St13|70356|suppression of tumorigenicity 13	AK147169|St13|70356|suppression of tumorigenicity 13
mm9_v1_chr4_-_147242501_147242654	0.301806	FOXD3.p2	BC017525|Miip|28010|migration and invasion inhibitory protein	AK133976|Miip|28010|migration and invasion inhibitory protein	AK170224|Miip|28010|migration and invasion inhibitory protein	BC024069|Miip|28010|migration and invasion inhibitory protein
mm9_v1_chr1_-_171461510_171461594	0.301776	FOXD3.p2	AK010351|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK012011|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC020026|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK089939|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AF326732|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK044882|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK162249|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK132467|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_023284|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chrX_-_162948399_162948409	0.30137	FOXD3.p2	AK140929|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	BC067008|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	NM_001007577|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing
mm9_v1_chr18_-_14131046_14131241	0.300677	FOXD3.p2	BC021376|Zfp521|225207|zinc finger protein 521	AK052655|Zfp521|225207|zinc finger protein 521	AY147406|Zfp521|225207|zinc finger protein 521	NM_145492|Zfp521|225207|zinc finger protein 521
mm9_v1_chr2_+_91386476_91386497	0.300527	FOXD3.p2	BC017140|Ckap5|75786|cytoskeleton associated protein 5	BC089032|Ckap5|75786|cytoskeleton associated protein 5	NM_001165989|Ckap5|75786|cytoskeleton associated protein 5	NM_029437|Ckap5|75786|cytoskeleton associated protein 5	BC138334|Ckap5|75786|cytoskeleton associated protein 5	BC096422|Ckap5|75786|cytoskeleton associated protein 5
mm9_v1_chr17_-_71202829_71202871	0.300492	FOXD3.p2	AK160193|Tgif1|21815|TGFB-induced factor homeobox 1	NM_001164074|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr6_-_42643001_42643085	0.300386	FOXD3.p2	AK076242|Fam115a|77574|family with sequence similarity 115, member A	AK013025|Fam115a|77574|family with sequence similarity 115, member A	AK148593|Fam115a|77574|family with sequence similarity 115, member A	AK053509|Fam115a|77574|family with sequence similarity 115, member A	NM_029930|Fam115a|77574|family with sequence similarity 115, member A	BC031718|Fam115a|77574|family with sequence similarity 115, member A
mm9_v1_chr13_-_108516475_108516490	0.299669	FOXD3.p2	AK013620|Zswim6|67263|zinc finger, SWIM domain containing 6	AK019357|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr5_-_23349880_23349980	0.299053	FOXD3.p2	AK008581|Tomm7|66169|translocase of outer mitochondrial membrane 7 homolog (yeast)	AK003864|Tomm7|66169|translocase of outer mitochondrial membrane 7 homolog (yeast)	BC055352|Tomm7|66169|translocase of outer mitochondrial membrane 7 homolog (yeast)	NM_025394|Tomm7|66169|translocase of outer mitochondrial membrane 7 homolog (yeast)
mm9_v1_chr13_+_49678115_49678143	0.298685	FOXD3.p2	AB007848|Omd|27047|osteomodulin	NM_012050|Omd|27047|osteomodulin	BC095997|Omd|27047|osteomodulin
mm9_v1_chr18_+_75527015_75527182	0.298397	FOXD3.p2	NM_001042660|Smad7|17131|MAD homolog 7 (Drosophila)	AK013237|Smad7|17131|MAD homolog 7 (Drosophila)	AJ000550|Smad7|17131|MAD homolog 7 (Drosophila)
mm9_v1_chr16_+_33725541_33725620	0.2982	FOXD3.p2	BC076596|Heg1|77446|HEG homolog 1 (zebrafish)
mm9_v1_chr9_-_48644030_48644051	0.297442	FOXD3.p2	AK040211|Zbtb16|235320|zinc finger and BTB domain containing 16	AK142947|Zbtb16|235320|zinc finger and BTB domain containing 16	NM_001033324|Zbtb16|235320|zinc finger and BTB domain containing 16
mm9_v1_chr11_-_88816679_88816773	0.295831	FOXD3.p2	AK050181|Scpep1|74617|serine carboxypeptidase 1	AK153485|Scpep1|74617|serine carboxypeptidase 1	BC021399|Scpep1|74617|serine carboxypeptidase 1	AF330052|Scpep1|74617|serine carboxypeptidase 1	AK153225|Scpep1|74617|serine carboxypeptidase 1	BC004847|Scpep1|74617|serine carboxypeptidase 1	AK014680|Scpep1|74617|serine carboxypeptidase 1	NM_029023|Scpep1|74617|serine carboxypeptidase 1
mm9_v1_chr2_-_28438708_28438725	0.295598	FOXD3.p2	BC027247|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	BC039171|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr17_+_56752805_56752873	0.295537	FOXD3.p2	NM_018730|Rpl36|54217|ribosomal protein L36	AK003115|Rpl36|54217|ribosomal protein L36	BC086914|Rpl36|54217|ribosomal protein L36	BC021595|Rpl36|54217|ribosomal protein L36	X75895|Rpl36|54217|ribosomal protein L36
mm9_v1_chr15_+_76730338_76730405	0.295279	FOXD3.p2	AK013148|Commd5|66398|COMM domain containing 5	AK010045|Commd5|66398|COMM domain containing 5	NM_025536|Commd5|66398|COMM domain containing 5	BC025891|Commd5|66398|COMM domain containing 5
mm9_v1_chr5_-_140797483_140797532	0.294912	FOXD3.p2	AK200567|Mad1l1|17120|mitotic arrest deficient 1-like 1	AF083812|Mad1l1|17120|mitotic arrest deficient 1-like 1	AF083813|Mad1l1|17120|mitotic arrest deficient 1-like 1	BC010702|Mad1l1|17120|mitotic arrest deficient 1-like 1	AK136981|Mad1l1|17120|mitotic arrest deficient 1-like 1	NM_010752|Mad1l1|17120|mitotic arrest deficient 1-like 1
mm9_v1_chr1_-_137064124_137064257	0.294442	FOXD3.p2	AK158275|Gpr37l1|171469|G protein-coupled receptor 37-like 1	NM_134438|Gpr37l1|171469|G protein-coupled receptor 37-like 1
mm9_v1_chr6_-_6528581_6528672	0.293622	FOXD3.p2	U41626|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK135462|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK167914|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	BC023490|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	BC058117|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK161690|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	X83589|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK160432|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	NM_009169|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK141911|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1
mm9_v1_chr2_+_162759398_162759483	0.292998	FOXD3.p2	AK185344|Srsf6|67996|serine/arginine-rich splicing factor 6	AK208133|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr9_+_98197001_98197080	0.292478	FOXD3.p2	BC005737|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	NM_144533|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK040783|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041526|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041897|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3
mm9_v1_chr7_+_109590208_109590457	0.29223	FOXD3.p2	NM_009103|Rrm1|20133|ribonucleotide reductase M1	M14224|Rrm1|20133|ribonucleotide reductase M1	AK199985|Rrm1|20133|ribonucleotide reductase M1	AK082135|Rrm1|20133|ribonucleotide reductase M1	BC066217|Rrm1|20133|ribonucleotide reductase M1	BC003299|Rrm1|20133|ribonucleotide reductase M1	AK168586|Rrm1|20133|ribonucleotide reductase M1	AK088043|Rrm1|20133|ribonucleotide reductase M1	AK137075|Rrm1|20133|ribonucleotide reductase M1	BC016450|Rrm1|20133|ribonucleotide reductase M1	K02927|Rrm1|20133|ribonucleotide reductase M1
mm9_v1_chr13_+_49063750_49063790	0.291516	FOXD3.p2	AK014080|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene	AK021143|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene
mm9_v1_chr3_-_50247306_50247534	0.291513	FOXD3.p2	AK162233|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK170568|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141402|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141408|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AB022345|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766236|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766237|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK165599|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089202|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037742|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK076322|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK163168|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171252|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171327|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089283|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171192|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037490|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	NM_011990|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm9_v1_chr3_+_65332306_65332400	0.291021	FOXD3.p2	AK163347|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK162094|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	U55178|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK028529|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	NM_178892|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK032453|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK150248|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	BC068173|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase
mm9_v1_chr14_+_79915429_79915530	0.290731	FOXD3.p2	AK132456|Elf1|13709|E74-like factor 1	U19617|Elf1|13709|E74-like factor 1	AK156098|Elf1|13709|E74-like factor 1	BC037743|Elf1|13709|E74-like factor 1	BC027532|Elf1|13709|E74-like factor 1	BC053914|Elf1|13709|E74-like factor 1
mm9_v1_chr2_-_74497475_74497613	0.290153	FOXD3.p2	M93128|Evx2|14029|even skipped homeotic gene 2 homolog	NM_007967|Evx2|14029|even skipped homeotic gene 2 homolog	BC061467|Evx2|14029|even skipped homeotic gene 2 homolog
mm9_v1_chr4_+_15885062_15885148	0.289999	FOXD3.p2	AK132302|Nbn|27354|nibrin	AK134805|Nbn|27354|nibrin	AK134960|Nbn|27354|nibrin	AK159790|Nbn|27354|nibrin	BC013190|Nbn|27354|nibrin	NM_013752|Nbn|27354|nibrin	BC044773|Nbn|27354|nibrin	AF076687|Nbn|27354|nibrin	BC055061|Nbn|27354|nibrin	AK031933|Nbn|27354|nibrin	AF092840|Nbn|27354|nibrin	AK160614|Nbn|27354|nibrin
mm9_v1_chr13_+_55828701_55828778	0.289738	FOXD3.p2	NM_028281|Pcbd2|72562|pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2	AK012465|Pcbd2|72562|pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2	BC028642|Pcbd2|72562|pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
mm9_v1_chr5_-_144775583_144775788	0.289461	FOXD3.p2	AK213761|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC048077|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_177682|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK090008|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK171671|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK172392|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK146704|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK150793|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152328|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152576|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK153160|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK164888|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
mm9_v1_chr2_-_144376513_144376606	0.287381	FOXD3.p2	AF039563|Rbbp9|26450|retinoblastoma binding protein 9	BC050201|Rbbp9|26450|retinoblastoma binding protein 9	AK017606|Rbbp9|26450|retinoblastoma binding protein 9	BC011107|Rbbp9|26450|retinoblastoma binding protein 9	BC147814|Rbbp9|26450|retinoblastoma binding protein 9	BC147815|Rbbp9|26450|retinoblastoma binding protein 9	AK076944|Rbbp9|26450|retinoblastoma binding protein 9	NM_015754|Rbbp9|26450|retinoblastoma binding protein 9
mm9_v1_chr6_+_51494521_51494550	0.287274	FOXD3.p2	AK028163|Snx10|71982|sorting nexin 10	NM_001127348|Snx10|71982|sorting nexin 10	NM_028035|Snx10|71982|sorting nexin 10	AK166121|Snx10|71982|sorting nexin 10
mm9_v1_chrM_+_7714_7790	0.287249	FOXD3.p2	AF093677|ATP6|17705|ATP synthase F0 subunit 6	BC069931|Gm10925|100191075|predicted gene 10925
mm9_v1_chr8_+_23337748_23337837	0.287237	FOXD3.p2	BC029898|Thsd1|56229|thrombospondin, type I, domain 1	AK049636|Thsd1|56229|thrombospondin, type I, domain 1	BC051957|Thsd1|56229|thrombospondin, type I, domain 1	AK052555|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr1_-_140753398_140753430	0.287208	FOXD3.p2	AK141677|2310009B15Rik|69549|RIKEN cDNA 2310009B15 gene	NM_001081226|2310009B15Rik|69549|RIKEN cDNA 2310009B15 gene
mm9_v1_chr9_-_34983552_34983647	0.286119	FOXD3.p2	AK171018|Dcps|69305|decapping enzyme, scavenger	AK005584|Dcps|69305|decapping enzyme, scavenger	NM_027030|Dcps|69305|decapping enzyme, scavenger	AY040775|Dcps|69305|decapping enzyme, scavenger	AK169641|Dcps|69305|decapping enzyme, scavenger	BC016273|Dcps|69305|decapping enzyme, scavenger	AK078253|Dcps|69305|decapping enzyme, scavenger
mm9_v1_chr12_+_86311859_86311909	0.285817	FOXD3.p2	NM_028632|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	BC094619|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	BC033045|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)
mm9_v1_chr16_-_33967064_33967149	0.285111	FOXD3.p2	BC003887|Umps|22247|uridine monophosphate synthetase	BC095981|Umps|22247|uridine monophosphate synthetase	AK159808|Umps|22247|uridine monophosphate synthetase	AK159955|Umps|22247|uridine monophosphate synthetase	AK035821|Umps|22247|uridine monophosphate synthetase	AK035997|Umps|22247|uridine monophosphate synthetase	AK090102|Umps|22247|uridine monophosphate synthetase	AK135187|Umps|22247|uridine monophosphate synthetase	NM_009471|Umps|22247|uridine monophosphate synthetase
mm9_v1_chr6_-_71390481_71390504	0.284796	FOXD3.p2	BC050876|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr11_-_60624733_60624766	0.284671	FOXD3.p2	NM_009171|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)
mm9_v1_chr1_-_45559700_45559773	0.284568	FOXD3.p2	AK139130|Col5a2|12832|collagen, type V, alpha 2	AK160008|Col5a2|12832|collagen, type V, alpha 2	L02918|Col5a2|12832|collagen, type V, alpha 2	AK084803|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr2_-_120862405_120862570	0.284376	FOXD3.p2	AK158219|Epb4.2|13828|erythrocyte protein band 4.2	AK158370|Epb4.2|13828|erythrocyte protein band 4.2	AK165288|Epb4.2|13828|erythrocyte protein band 4.2	AK172410|Epb4.2|13828|erythrocyte protein band 4.2	AK158247|Epb4.2|13828|erythrocyte protein band 4.2	BC053739|Epb4.2|13828|erythrocyte protein band 4.2	AK143841|Epb4.2|13828|erythrocyte protein band 4.2	L35933|Epb4.2|13828|erythrocyte protein band 4.2	BC066194|Epb4.2|13828|erythrocyte protein band 4.2	BC066806|Epb4.2|13828|erythrocyte protein band 4.2	NM_013513|Epb4.2|13828|erythrocyte protein band 4.2	U04055|Epb4.2|13828|erythrocyte protein band 4.2	AK133896|Epb4.2|13828|erythrocyte protein band 4.2	AK137484|Epb4.2|13828|erythrocyte protein band 4.2
mm9_v1_chr6_-_127075853_127076093	0.283187	FOXD3.p2	AK193960|Ccnd2|12444|cyclin D2	AK011429|Ccnd2|12444|cyclin D2	AK009602|Ccnd2|12444|cyclin D2
mm9_v1_chr4_-_63707964_63707973	0.283077	FOXD3.p2	AK085667|Tnc|21923|tenascin C
mm9_v1_chr2_-_6466116_6466118	0.28259	FOXD3.p2	AK134815|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr3_-_117571789_117571835	0.281401	FOXD3.p2	AK170966|Snx7|76561|sorting nexin 7	AK052487|Snx7|76561|sorting nexin 7	AK011015|Snx7|76561|sorting nexin 7
mm9_v1_chr7_-_134404120_134404235	0.281172	FOXD3.p2	AK010606|Dctpp1|66422|dCTP pyrophosphatase 1	AK003643|Dctpp1|66422|dCTP pyrophosphatase 1	AK010508|Dctpp1|66422|dCTP pyrophosphatase 1	AF110764|Dctpp1|66422|dCTP pyrophosphatase 1	NM_023203|Dctpp1|66422|dCTP pyrophosphatase 1	BC004623|Dctpp1|66422|dCTP pyrophosphatase 1
mm9_v1_chr2_+_79547936_79548278	0.281082	FOXD3.p2	AK051670|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	NM_172420|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC120706|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC132149|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK051449|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK157871|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK083940|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm9_v1_chr11_+_98769162_98769202	0.280343	FOXD3.p2	AK162669|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)	AK075975|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)	AK085020|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)	AK012192|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)	BC052434|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)	NM_001025779|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)
mm9_v1_chr1_+_136859153_136859176	0.280073	FOXD3.p2	AK021213|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)	NM_026024|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)	AK166098|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)
mm9_v1_chr3_-_115832278_115832299	0.280002	FOXD3.p2	CT010373|Vcam1|22329|vascular cell adhesion molecule 1	X67783|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr4_-_118862555_118862615	0.279745	FOXD3.p2	BC063257|Ermap|27028|erythroblast membrane-associated protein	AF153906|Ermap|27028|erythroblast membrane-associated protein	AK036702|Ermap|27028|erythroblast membrane-associated protein	AK158114|Ermap|27028|erythroblast membrane-associated protein	AK137510|Ermap|27028|erythroblast membrane-associated protein	NM_013848|Ermap|27028|erythroblast membrane-associated protein
mm9_v1_chr3_-_107948968_107949026	0.279324	FOXD3.p2	BC041107|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	BC003462|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK168578|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK133749|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK169067|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK167438|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm9_v1_chr2_+_30271550_30271576	0.27921	FOXD3.p2	AK031591|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	NM_138748|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr18_+_23656024_23656160	0.278662	FOXD3.p2	AK147359|Dtna|13527|dystrobrevin alpha	BC050765|Dtna|13527|dystrobrevin alpha	AK131649|Dtna|13527|dystrobrevin alpha	X95226|Dtna|13527|dystrobrevin alpha
mm9_v1_chr8_-_90483392_90483493	0.277925	FOXD3.p2	AY256893|Zfp423|94187|zinc finger protein 423	AK122365|Zfp423|94187|zinc finger protein 423	NM_033327|Zfp423|94187|zinc finger protein 423
mm9_v1_chr1_-_154233721_154233811	0.277412	FOXD3.p2	AK169429|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC024342|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK004261|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK053666|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK011608|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC145701|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK017650|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_025677|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
mm9_v1_chr6_-_98292747_98292747	0.276173	FOXD3.p2	BC147266|Gm765|330390|predicted gene 765	BC147267|Gm765|330390|predicted gene 765	NM_001128092|Gm765|330390|predicted gene 765
mm9_v1_chr18_+_80403500_80403576	0.275731	FOXD3.p2	AK010599|Txnl4a|27366|thioredoxin-like 4A	NM_001038608|Txnl4a|27366|thioredoxin-like 4A	NM_025299|Txnl4a|27366|thioredoxin-like 4A	AK148287|Txnl4a|27366|thioredoxin-like 4A	AK166497|Txnl4a|27366|thioredoxin-like 4A	BC029327|Txnl4a|27366|thioredoxin-like 4A	AK007331|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr1_-_186706866_186706914	0.275406	FOXD3.p2	AK052654|C130074G19Rik|226777|RIKEN cDNA C130074G19 gene	AK084264|C130074G19Rik|226777|RIKEN cDNA C130074G19 gene	AK081755|C130074G19Rik|226777|RIKEN cDNA C130074G19 gene	AK087640|C130074G19Rik|226777|RIKEN cDNA C130074G19 gene	BC116951|C130074G19Rik|226777|RIKEN cDNA C130074G19 gene	BC116953|C130074G19Rik|226777|RIKEN cDNA C130074G19 gene	NM_178692|C130074G19Rik|226777|RIKEN cDNA C130074G19 gene
mm9_v1_chr2_+_164388211_164388224	0.275395	FOXD3.p2	AK005519|Wfdc2|67701|WAP four-disulfide core domain 2	NM_026323|Wfdc2|67701|WAP four-disulfide core domain 2	AF334269|Wfdc2|67701|WAP four-disulfide core domain 2	BC099427|Wfdc2|67701|WAP four-disulfide core domain 2
mm9_v1_chr9_+_70526702_70526924	0.274747	FOXD3.p2	BC066207|Adam10|11487|a disintegrin and metallopeptidase domain 10	NM_007399|Adam10|11487|a disintegrin and metallopeptidase domain 10	BC057346|Adam10|11487|a disintegrin and metallopeptidase domain 10
mm9_v1_chr19_-_41289045_41289143	0.274479	FOXD3.p2	AK004050|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr8_-_35040277_35040351	0.273862	FOXD3.p2	AK041118|Rbpms|19663|RNA binding protein gene with multiple splicing	AK079238|Rbpms|19663|RNA binding protein gene with multiple splicing	BC030397|Rbpms|19663|RNA binding protein gene with multiple splicing	NM_001042674|Rbpms|19663|RNA binding protein gene with multiple splicing	NM_001042675|Rbpms|19663|RNA binding protein gene with multiple splicing	NM_019733|Rbpms|19663|RNA binding protein gene with multiple splicing
mm9_v1_chr18_+_36904309_36904426	0.273228	FOXD3.p2	NM_011879|Ik|24010|IK cytokine	BC006706|Ik|24010|IK cytokine	AK167238|Ik|24010|IK cytokine	BC029148|Ik|24010|IK cytokine	AK050625|Ik|24010|IK cytokine	AK029644|Ik|24010|IK cytokine	AK163766|Ik|24010|IK cytokine	AK087976|Ik|24010|IK cytokine	BC029671|Ik|24010|IK cytokine	BC029694|Ik|24010|IK cytokine	AK088908|Ik|24010|IK cytokine	AK082356|Ik|24010|IK cytokine	BC014739|Ik|24010|IK cytokine	BC026569|Ik|24010|IK cytokine	BC033356|Ik|24010|IK cytokine	AJ006130|Ik|24010|IK cytokine
mm9_v1_chr17_+_46783180_46783244	0.273193	FOXD3.p2	NM_025302|Mrpl2|27398|mitochondrial ribosomal protein L2	AK007672|Mrpl2|27398|mitochondrial ribosomal protein L2	AK009521|Mrpl2|27398|mitochondrial ribosomal protein L2	BC027762|Mrpl2|27398|mitochondrial ribosomal protein L2
mm9_v1_chr6_-_145024596_145024703	0.273156	FOXD3.p2	BC053706|Bcat1|12035|branched chain aminotransferase 1, cytosolic	X17502|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK167232|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK166971|Bcat1|12035|branched chain aminotransferase 1, cytosolic	NM_007532|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK168249|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr9_-_71011053_71011095	0.271905	FOXD3.p2	BC024105|Aqp9|64008|aquaporin 9	AK050042|Aqp9|64008|aquaporin 9	NM_022026|Aqp9|64008|aquaporin 9
mm9_v1_chr11_+_115425756_115425843	0.271554	FOXD3.p2	NM_001002929|Nup85|445007|nucleoporin 85	BC079856|Nup85|445007|nucleoporin 85	AK017632|Nup85|445007|nucleoporin 85	AF498263|Nup85|445007|nucleoporin 85
mm9_v1_chr5_-_5514787_5514975	0.270146	FOXD3.p2	NM_001193660|Cldn12|64945|claudin 12	AK166110|Cldn12|64945|claudin 12	AK049331|Cldn12|64945|claudin 12	AK132155|Cldn12|64945|claudin 12	NM_001193659|Cldn12|64945|claudin 12	NM_001193661|Cldn12|64945|claudin 12	AK128999|Cldn12|64945|claudin 12	BC024057|Cldn12|64945|claudin 12	NM_022890|Cldn12|64945|claudin 12
mm9_v1_chr7_+_125856066_125856131	0.269681	FOXD3.p2	BC053103|6330503K22Rik|101565|RIKEN cDNA 6330503K22 gene	NM_182995|6330503K22Rik|101565|RIKEN cDNA 6330503K22 gene	AK141641|6330503K22Rik|101565|RIKEN cDNA 6330503K22 gene
mm9_v1_chr3_-_65940346_65940359	0.26959	FOXD3.p2	AB085189|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	AK013398|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_028357|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)
mm9_v1_chr4_-_116300068_116300103	0.269186	FOXD3.p2	BC004693|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AF095722|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AK008295|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AK083333|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	NM_001081475|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)
mm9_v1_chr3_+_84781329_84781358	0.268672	FOXD3.p2	
mm9_v1_chr15_+_99803329_99803358	0.267198	FOXD3.p2	AK139909|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr14_-_100548982_100549014	0.267134	FOXD3.p2	AB221575|Klf12|16597|Kruppel-like factor 12	Y14295|Klf12|16597|Kruppel-like factor 12	BC067408|Klf12|16597|Kruppel-like factor 12	NM_010636|Klf12|16597|Kruppel-like factor 12
mm9_v1_chr10_+_93103936_93104198	0.266792	FOXD3.p2	AF281278|Ntn4|57764|netrin 4	BC119182|Ntn4|57764|netrin 4	BC119184|Ntn4|57764|netrin 4	AF268066|Ntn4|57764|netrin 4
mm9_v1_chr6_+_147040006_147040062	0.266075	FOXD3.p2	AK048908|Klhdc5|232539|kelch domain containing 5	AK083047|Klhdc5|232539|kelch domain containing 5	AK052765|Klhdc5|232539|kelch domain containing 5
mm9_v1_chr11_+_96891242_96891268	0.266054	FOXD3.p2	NM_146027|Scrn2|217140|secernin 2
mm9_v1_chr11_+_75813413_75813528	0.265748	FOXD3.p2	NM_198637|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	BC049758|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK006044|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK132806|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene
mm9_v1_chrX_-_91457986_91458033	0.265216	FOXD3.p2	AK128949|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK171317|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC063755|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC139234|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC139235|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	NM_012010|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK165866|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK150095|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK146900|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm9_v1_chr2_-_140497116_140497135	0.263468	FOXD3.p2	AK129369|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr3_+_105762425_105762460	0.263063	FOXD3.p2	AK012014|Wdr77|70465|WD repeat domain 77	AK161812|Wdr77|70465|WD repeat domain 77	BC005755|Wdr77|70465|WD repeat domain 77
mm9_v1_chr18_+_50287848_50287993	0.2627	FOXD3.p2	AK004866|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK088381|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK147182|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK167060|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK166801|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK169077|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK152532|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK161655|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	BC022175|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	NM_008292|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	X89998|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4
mm9_v1_chr14_-_104243474_104243491	0.262436	FOXD3.p2	AK082103|Ednrb|13618|endothelin receptor type B
mm9_v1_chr4_-_142889372_142889476	0.262348	FOXD3.p2	NM_010329|Pdpn|14726|podoplanin	AK158855|Pdpn|14726|podoplanin
mm9_v1_chr19_+_46576230_46576286	0.262061	FOXD3.p2	BC082298|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr1_+_134373950_134374067	0.261403	FOXD3.p2	AK049247|Rbbp5|213464|retinoblastoma binding protein 5	BC057632|Rbbp5|213464|retinoblastoma binding protein 5	AK179022|Rbbp5|213464|retinoblastoma binding protein 5	AK195903|Rbbp5|213464|retinoblastoma binding protein 5
mm9_v1_chr1_+_94803538_94803618	0.261199	FOXD3.p2	AK163560|Dusp28|67446|dual specificity phosphatase 28	AK002934|Dusp28|67446|dual specificity phosphatase 28	NM_175118|Dusp28|67446|dual specificity phosphatase 28	BC119127|Dusp28|67446|dual specificity phosphatase 28	BC051598|Dusp28|67446|dual specificity phosphatase 28	AK088940|Dusp28|67446|dual specificity phosphatase 28
mm9_v1_chr2_+_34262372_34262384	0.261092	FOXD3.p2	AK042154|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	AK148428|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr15_+_76157816_76157892	0.259843	FOXD3.p2	AK089890|Exosc4|109075|exosome component 4	NM_175399|Exosc4|109075|exosome component 4	AK167629|Exosc4|109075|exosome component 4	AK083308|Exosc4|109075|exosome component 4	BC012277|Exosc4|109075|exosome component 4
mm9_v1_chr2_+_173901808_173901844	0.259513	FOXD3.p2	AK029571|Stx16|228960|syntaxin 16
mm9_v1_chr5_+_64621640_64621693	0.259147	FOXD3.p2	AK148356|Tbc1d1|57915|TBC1 domain family, member 1
mm9_v1_chr6_+_38501333_38501546	0.258798	FOXD3.p2	AK046307|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK044839|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170848|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170849|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_138680|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK155264|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056383|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056354|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056970|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK166155|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK147889|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AF318301|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK038543|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK048581|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK053863|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK134191|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr4_-_14753526_14753603	0.25756	FOXD3.p2	BC087552|Otud6b|72201|OTU domain containing 6B	AK172229|Otud6b|72201|OTU domain containing 6B	AK172338|Otud6b|72201|OTU domain containing 6B	BC031474|Otud6b|72201|OTU domain containing 6B	AK011203|Otud6b|72201|OTU domain containing 6B	AK169134|Otud6b|72201|OTU domain containing 6B	AK166546|Otud6b|72201|OTU domain containing 6B	AK144761|Otud6b|72201|OTU domain containing 6B	AK166445|Otud6b|72201|OTU domain containing 6B	AK155761|Otud6b|72201|OTU domain containing 6B
mm9_v1_chr10_+_25079661_25079716	0.256447	FOXD3.p2	AK170275|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK167434|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	BC023768|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK052475|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr16_-_31314534_31314685	0.255617	FOXD3.p2	X82648|Apod|11815|apolipoprotein D	AK158118|Apod|11815|apolipoprotein D	AK157925|Apod|11815|apolipoprotein D	AK135046|Apod|11815|apolipoprotein D	AK157917|Apod|11815|apolipoprotein D	AK160729|Apod|11815|apolipoprotein D	AK162392|Apod|11815|apolipoprotein D	NM_007470|Apod|11815|apolipoprotein D	AK158405|Apod|11815|apolipoprotein D
mm9_v1_chr8_+_68910191_68910205	0.253848	FOXD3.p2	AK036489|March1|72925|membrane-associated ring finger (C3HC4) 1	AK089040|March1|72925|membrane-associated ring finger (C3HC4) 1	AK152592|March1|72925|membrane-associated ring finger (C3HC4) 1	AK163081|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166375|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr3_-_95161071_95161127	0.25369	FOXD3.p2	AK135833|Setdb1|84505|SET domain, bifurcated 1	BC079537|Setdb1|84505|SET domain, bifurcated 1	AF091628|Setdb1|84505|SET domain, bifurcated 1	AF546078|Setdb1|84505|SET domain, bifurcated 1	AY091600|Setdb1|84505|SET domain, bifurcated 1	BC060173|Setdb1|84505|SET domain, bifurcated 1	AK132202|Setdb1|84505|SET domain, bifurcated 1	NM_001163641|Setdb1|84505|SET domain, bifurcated 1	NM_001163642|Setdb1|84505|SET domain, bifurcated 1	NM_018877|Setdb1|84505|SET domain, bifurcated 1
mm9_v1_chr5_-_135115175_135115219	0.253683	FOXD3.p2	AK169312|Eif4h|22384|eukaryotic translation initiation factor 4H	AK149841|Eif4h|22384|eukaryotic translation initiation factor 4H	AK136999|Eif4h|22384|eukaryotic translation initiation factor 4H	AK135390|Eif4h|22384|eukaryotic translation initiation factor 4H	AK166567|Eif4h|22384|eukaryotic translation initiation factor 4H	AK169353|Eif4h|22384|eukaryotic translation initiation factor 4H	NM_033561|Eif4h|22384|eukaryotic translation initiation factor 4H	AK045004|Eif4h|22384|eukaryotic translation initiation factor 4H	AK150088|Eif4h|22384|eukaryotic translation initiation factor 4H	BC014796|Eif4h|22384|eukaryotic translation initiation factor 4H	AK088818|Eif4h|22384|eukaryotic translation initiation factor 4H	AK168872|Eif4h|22384|eukaryotic translation initiation factor 4H	AK169407|Eif4h|22384|eukaryotic translation initiation factor 4H	AK132034|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr1_-_36300951_36301026	0.253135	FOXD3.p2	AK087883|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK144381|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr7_-_137409721_137409804	0.25286	FOXD3.p2	BC065069|Fgfr2|14183|fibroblast growth factor receptor 2	X55441|Fgfr2|14183|fibroblast growth factor receptor 2	BC072640|Fgfr2|14183|fibroblast growth factor receptor 2	M63503|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chr16_+_20672847_20672848	0.252132	FOXD3.p2	AK134557|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr17_-_25933989_25933999	0.252091	FOXD3.p2	AK087402|Metrn|70083|meteorin, glial cell differentiation regulator	NM_133719|Metrn|70083|meteorin, glial cell differentiation regulator
mm9_v1_chr10_+_12728252_12728328	0.251447	FOXD3.p2	NM_175102|Sf3b5|66125|splicing factor 3b, subunit 5	BC006603|Sf3b5|66125|splicing factor 3b, subunit 5	AK010348|Sf3b5|66125|splicing factor 3b, subunit 5	AK003475|Sf3b5|66125|splicing factor 3b, subunit 5	AK009874|Sf3b5|66125|splicing factor 3b, subunit 5
mm9_v1_chr13_+_49639847_49640001	0.251106	FOXD3.p2	AK014504|Aspn|66695|asporin	AK021386|Aspn|66695|asporin	AK085920|Aspn|66695|asporin	BC034888|Aspn|66695|asporin	BC145904|Aspn|66695|asporin	BC145930|Aspn|66695|asporin
mm9_v1_chrM_+_7009_7016	0.250894	FOXD3.p2	AF378830|COX2|17709|cytochrome c oxidase subunit II	AK131586|COX2|17709|cytochrome c oxidase subunit II
mm9_v1_chr8_+_125626249_125626348	0.248623	FOXD3.p2	NM_016738|Rpl13|270106|ribosomal protein L13	AK003487|Rpl13|270106|ribosomal protein L13	AK010989|Rpl13|270106|ribosomal protein L13	AK002787|Rpl13|270106|ribosomal protein L13	U28917|Rpl13|270106|ribosomal protein L13	BC085493|Rpl13|270106|ribosomal protein L13	BC034449|Rpl13|270106|ribosomal protein L13	BC055358|Rpl13|270106|ribosomal protein L13
mm9_v1_chr9_+_53149188_53149418	0.248557	FOXD3.p2	AK046924|Exph5|320051|exophilin 5	AK044881|Exph5|320051|exophilin 5
mm9_v1_chrX_+_93651684_93651766	0.248476	FOXD3.p2	NM_001159627|Heph|15203|hephaestin	NM_181273|Heph|15203|hephaestin	AK081330|Heph|15203|hephaestin	AK129194|Heph|15203|hephaestin	AK032895|Heph|15203|hephaestin	AK086923|Heph|15203|hephaestin
mm9_v1_chr9_-_65972570_65972698	0.248006	FOXD3.p2	AK155746|Snx1|56440|sorting nexin 1	AK167993|Snx1|56440|sorting nexin 1	BC066189|Snx1|56440|sorting nexin 1	AK154079|Snx1|56440|sorting nexin 1	AK149850|Snx1|56440|sorting nexin 1	AB019214|Snx1|56440|sorting nexin 1	AK167177|Snx1|56440|sorting nexin 1	BC066044|Snx1|56440|sorting nexin 1	AK161241|Snx1|56440|sorting nexin 1	AK168742|Snx1|56440|sorting nexin 1	AF154120|Snx1|56440|sorting nexin 1	NM_019727|Snx1|56440|sorting nexin 1
mm9_v1_chr14_-_118450875_118451546	0.247908	FOXD3.p2	EU554632|Dct|13190|dopachrome tautomerase	AK214181|Dct|13190|dopachrome tautomerase	AK214448|Dct|13190|dopachrome tautomerase	AK217087|Dct|13190|dopachrome tautomerase	AK212164|Dct|13190|dopachrome tautomerase	AK219002|Dct|13190|dopachrome tautomerase	BC082330|Dct|13190|dopachrome tautomerase	AK209892|Dct|13190|dopachrome tautomerase	AK191654|Dct|13190|dopachrome tautomerase	BC067064|Dct|13190|dopachrome tautomerase	X63349|Dct|13190|dopachrome tautomerase	AK033040|Dct|13190|dopachrome tautomerase	NM_010024|Dct|13190|dopachrome tautomerase	AK202452|Dct|13190|dopachrome tautomerase
mm9_v1_chr12_+_78339071_78339134	0.24784	FOXD3.p2	BC010666|Fut8|53618|fucosyltransferase 8	AK051811|Fut8|53618|fucosyltransferase 8
mm9_v1_chrX_+_104115963_104116162	0.247061	FOXD3.p2	NM_175271|Lpar4|78134|lysophosphatidic acid receptor 4	BC052178|Lpar4|78134|lysophosphatidic acid receptor 4	AK051709|Lpar4|78134|lysophosphatidic acid receptor 4	AK019967|Lpar4|78134|lysophosphatidic acid receptor 4	AK045289|Lpar4|78134|lysophosphatidic acid receptor 4	BC069178|Lpar4|78134|lysophosphatidic acid receptor 4	BC138893|Lpar4|78134|lysophosphatidic acid receptor 4	BC138894|Lpar4|78134|lysophosphatidic acid receptor 4
mm9_v1_chr9_-_36604816_36604957	0.247025	FOXD3.p2	AK147776|Ei24|13663|etoposide induced 2.4 mRNA	AK159927|Ei24|13663|etoposide induced 2.4 mRNA	AK145018|Ei24|13663|etoposide induced 2.4 mRNA	AK172233|Ei24|13663|etoposide induced 2.4 mRNA
mm9_v1_chr19_+_22767272_22767282	0.246904	FOXD3.p2	AK053673|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK046908|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK077331|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK082141|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK142504|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK161909|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK163890|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr2_+_59192308_59192366	0.246832	FOXD3.p2	AK021168|Pkp4|227937|plakophilin 4
mm9_v1_chr11_-_110112926_110113089	0.246762	FOXD3.p2	BC132417|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	BC132419|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK053384|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AF498361|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK042934|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK018242|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK040652|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166556|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166557|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_147218|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6
mm9_v1_chr10_-_114622068_114622080	0.246751	FOXD3.p2	BC120514|Tph2|216343|tryptophan hydroxylase 2	BC125430|Tph2|216343|tryptophan hydroxylase 2	AY090565|Tph2|216343|tryptophan hydroxylase 2	NM_173391|Tph2|216343|tryptophan hydroxylase 2
mm9_v1_chr4_+_98590457_98590500	0.2467	FOXD3.p2	AK080882|Usp1|230484|ubiquitin specific peptidase 1	NM_146144|Usp1|230484|ubiquitin specific peptidase 1
mm9_v1_chrX_+_133357268_133357438	0.246408	FOXD3.p2	AK160872|Plp1|18823|proteolipid protein (myelin) 1	AK134554|Plp1|18823|proteolipid protein (myelin) 1	M15442|Plp1|18823|proteolipid protein (myelin) 1	AK077564|Plp1|18823|proteolipid protein (myelin) 1	BC027010|Plp1|18823|proteolipid protein (myelin) 1	NM_011123|Plp1|18823|proteolipid protein (myelin) 1	AK192772|Plp1|18823|proteolipid protein (myelin) 1	AK203421|Plp1|18823|proteolipid protein (myelin) 1
mm9_v1_chr9_+_54758322_54758381	0.246401	FOXD3.p2	AK038058|Ireb2|64602|iron responsive element binding protein 2
mm9_v1_chr6_+_29644178_29644255	0.246236	FOXD3.p2	AF276890|Tspan33|232670|tetraspanin 33	AK172176|Tspan33|232670|tetraspanin 33	AK004954|Tspan33|232670|tetraspanin 33	BC024685|Tspan33|232670|tetraspanin 33	NM_146173|Tspan33|232670|tetraspanin 33
mm9_v1_chrX_-_147248815_147248863	0.246065	FOXD3.p2	AJ277114|Maged2|80884|melanoma antigen, family D, 2	NM_030700|Maged2|80884|melanoma antigen, family D, 2	AK169006|Maged2|80884|melanoma antigen, family D, 2
mm9_v1_chr6_+_113339088_113339253	0.24523	FOXD3.p2	AK003923|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK029462|Ttll3|101100|tubulin tyrosine ligase-like family, member 3	NM_001142732|Ttll3|101100|tubulin tyrosine ligase-like family, member 3
mm9_v1_chr1_+_136321327_136321456	0.2447	FOXD3.p2	AK214372|Adipor1|72674|adiponectin receptor 1	AK180261|Adipor1|72674|adiponectin receptor 1
mm9_v1_chr1_-_176851918_176851937	0.244626	FOXD3.p2	AK161827|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	BC079905|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr1_+_152240466_152240735	0.244579	FOXD3.p2	BC108349|Tpr|108989|translocated promoter region	BC021320|Tpr|108989|translocated promoter region	BC060955|Tpr|108989|translocated promoter region	AK157974|Tpr|108989|translocated promoter region
mm9_v1_chr2_-_26207615_26207656	0.243914	FOXD3.p2	AK004089|Dnlz|52838|DNL-type zinc finger	AK142070|Dnlz|52838|DNL-type zinc finger	NM_001139503|Dnlz|52838|DNL-type zinc finger	NM_001139504|Dnlz|52838|DNL-type zinc finger	NM_026828|Dnlz|52838|DNL-type zinc finger
mm9_v1_chr18_+_69505374_69505487	0.243709	FOXD3.p2	NM_001083967|Tcf4|21413|transcription factor 4	AK081012|Tcf4|21413|transcription factor 4	AK145285|Tcf4|21413|transcription factor 4	AK028748|Tcf4|21413|transcription factor 4	S75870|Tcf4|21413|transcription factor 4
mm9_v1_chr4_-_88368313_88368424	0.243506	FOXD3.p2	AK129338|Klhl9|242521|kelch-like 9 (Drosophila)	BC094556|Klhl9|242521|kelch-like 9 (Drosophila)	AK049803|Klhl9|242521|kelch-like 9 (Drosophila)	AK033231|Klhl9|242521|kelch-like 9 (Drosophila)	NM_172871|Klhl9|242521|kelch-like 9 (Drosophila)
mm9_v1_chr17_-_45570469_45570504	0.242832	FOXD3.p2	BC003893|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK150562|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK150861|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK146892|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK172950|Cdc5l|71702|cell division cycle 5-like (S. pombe)
mm9_v1_chr7_+_128061257_128061281	0.242806	FOXD3.p2	AK005034|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	NM_001164096|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	NM_025298|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr15_-_81702298_81702350	0.24164	FOXD3.p2	AK163247|Phf5a|68479|PHD finger protein 5A	AK143590|Phf5a|68479|PHD finger protein 5A	NM_026737|Phf5a|68479|PHD finger protein 5A	AK167955|Phf5a|68479|PHD finger protein 5A	BC025161|Phf5a|68479|PHD finger protein 5A	AK003520|Phf5a|68479|PHD finger protein 5A	AF479288|Phf5a|68479|PHD finger protein 5A	AK167932|Phf5a|68479|PHD finger protein 5A
mm9_v1_chr11_+_69435553_69435610	0.24158	FOXD3.p2	AK011406|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	AK161230|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	BC061227|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	NM_026991|Sat2|69215|spermidine/spermine N1-acetyl transferase 2
mm9_v1_chr7_-_20355818_20355873	0.241461	FOXD3.p2	AF346663|Bcam|57278|basal cell adhesion molecule	AF221507|Bcam|57278|basal cell adhesion molecule	AB035511|Bcam|57278|basal cell adhesion molecule	AK075704|Bcam|57278|basal cell adhesion molecule	AK158439|Bcam|57278|basal cell adhesion molecule	AK054001|Bcam|57278|basal cell adhesion molecule	AK040564|Bcam|57278|basal cell adhesion molecule	BC004826|Bcam|57278|basal cell adhesion molecule
mm9_v1_chr10_-_4752710_4752812	0.240817	FOXD3.p2	AK054222|Myct1|68632|myc target 1	AK030706|Myct1|68632|myc target 1	AK142963|Myct1|68632|myc target 1	BC096559|Myct1|68632|myc target 1	AY090114|Myct1|68632|myc target 1	AK003845|Myct1|68632|myc target 1	NM_026793|Myct1|68632|myc target 1
mm9_v1_chr9_+_37421361_37421439	0.240352	FOXD3.p2	AK028598|Siae|22619|sialic acid acetylesterase	AK165103|Siae|22619|sialic acid acetylesterase	AK043392|Siae|22619|sialic acid acetylesterase	AK167103|Siae|22619|sialic acid acetylesterase	AK164852|Siae|22619|sialic acid acetylesterase	U40408|Siae|22619|sialic acid acetylesterase	AK028656|Siae|22619|sialic acid acetylesterase	NM_011734|Siae|22619|sialic acid acetylesterase	U61183|Siae|22619|sialic acid acetylesterase	X98625|Siae|22619|sialic acid acetylesterase	BC007136|Siae|22619|sialic acid acetylesterase
mm9_v1_chr8_-_11635748_11635782	0.240046	FOXD3.p2	AK031808|Ankrd10|102334|ankyrin repeat domain 10	AK033623|Ankrd10|102334|ankyrin repeat domain 10	AK038156|Ankrd10|102334|ankyrin repeat domain 10	AK042500|Ankrd10|102334|ankyrin repeat domain 10	AK081754|Ankrd10|102334|ankyrin repeat domain 10	AK082875|Ankrd10|102334|ankyrin repeat domain 10	AK084456|Ankrd10|102334|ankyrin repeat domain 10	AK143253|Ankrd10|102334|ankyrin repeat domain 10	NM_001167967|Ankrd10|102334|ankyrin repeat domain 10	NM_133971|Ankrd10|102334|ankyrin repeat domain 10	AK050983|Ankrd10|102334|ankyrin repeat domain 10
mm9_v1_chr11_+_80022611_80022825	0.239858	FOXD3.p2	AK028597|Rhot1|59040|ras homolog gene family, member T1	AK078955|Rhot1|59040|ras homolog gene family, member T1	AK138830|Rhot1|59040|ras homolog gene family, member T1	AK041119|Rhot1|59040|ras homolog gene family, member T1	BC055823|Rhot1|59040|ras homolog gene family, member T1	BC058350|Rhot1|59040|ras homolog gene family, member T1	AK053263|Rhot1|59040|ras homolog gene family, member T1	AK043323|Rhot1|59040|ras homolog gene family, member T1	AK141621|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr16_+_87354429_87354497	0.239824	FOXD3.p2	AY456393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_001159331|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_026366|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116394|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK160298|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK145617|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC098330|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK012019|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AY536887|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm9_v1_chr7_+_148127464_148127517	0.238536	FOXD3.p2	AK085600|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)	AK077662|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)	NM_145387|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)	BC056953|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)
mm9_v1_chr1_+_45368568_45368573	0.238306	FOXD3.p2	M18933|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr2_+_92024338_92024494	0.238135	FOXD3.p2	NM_138755|Phf21a|192285|PHD finger protein 21A	AB105178|Phf21a|192285|PHD finger protein 21A	AK089411|Phf21a|192285|PHD finger protein 21A	BC019181|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr2_+_151319915_151320083	0.237488	FOXD3.p2	AK039136|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	AK137088|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	AK013024|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	BC050936|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	NM_198326|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	BC106101|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	AK181317|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)
mm9_v1_chr7_+_19868009_19868016	0.236724	FOXD3.p2	AK144271|Rtn2|20167|reticulon 2 (Z-band associated protein)	BC031370|Rtn2|20167|reticulon 2 (Z-band associated protein)	NM_013648|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038538|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr6_+_5340417_5340708	0.236298	FOXD3.p2	AK132068|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK018373|Asb4|65255|ankyrin repeat and SOCS box-containing 4	BC054745|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK076004|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AF155355|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK133894|Asb4|65255|ankyrin repeat and SOCS box-containing 4
mm9_v1_chr17_+_46633703_46633755	0.236197	FOXD3.p2	BC082791|BC048355|381101|cDNA sequence BC048355	AK146723|BC048355|381101|cDNA sequence BC048355	NM_207161|BC048355|381101|cDNA sequence BC048355	BC048355|BC048355|381101|cDNA sequence BC048355	AK151589|BC048355|381101|cDNA sequence BC048355
mm9_v1_chr4_-_125879832_125879953	0.235981	FOXD3.p2	AK034044|Thrap3|230753|thyroid hormone receptor associated protein 3	AK079601|Thrap3|230753|thyroid hormone receptor associated protein 3	BC026580|Thrap3|230753|thyroid hormone receptor associated protein 3	BC092239|Thrap3|230753|thyroid hormone receptor associated protein 3	AK169008|Thrap3|230753|thyroid hormone receptor associated protein 3	BC048391|Thrap3|230753|thyroid hormone receptor associated protein 3	NM_146153|Thrap3|230753|thyroid hormone receptor associated protein 3
mm9_v1_chr2_+_104430617_104430708	0.235038	FOXD3.p2	AK158169|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	NM_001037326|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	NM_145529|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	NM_177253|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	BC003241|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	BC058605|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	AK028899|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm9_v1_chr6_-_71773747_71773805	0.234702	FOXD3.p2	AK039187|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010369|Mrpl35|66223|mitochondrial ribosomal protein L35	AK012807|Mrpl35|66223|mitochondrial ribosomal protein L35	AK004385|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010223|Mrpl35|66223|mitochondrial ribosomal protein L35	BC028750|Mrpl35|66223|mitochondrial ribosomal protein L35	NM_025430|Mrpl35|66223|mitochondrial ribosomal protein L35
mm9_v1_chr16_-_4077714_4077843	0.234593	FOXD3.p2	AK188521|Trap1|68015|TNF receptor-associated protein 1	BC006864|Trap1|68015|TNF receptor-associated protein 1	BC006685|Trap1|68015|TNF receptor-associated protein 1	AK002409|Trap1|68015|TNF receptor-associated protein 1	AK088471|Trap1|68015|TNF receptor-associated protein 1	AK162067|Trap1|68015|TNF receptor-associated protein 1	AK167181|Trap1|68015|TNF receptor-associated protein 1	BC022912|Trap1|68015|TNF receptor-associated protein 1	AK010341|Trap1|68015|TNF receptor-associated protein 1	NM_026508|Trap1|68015|TNF receptor-associated protein 1	AK143494|Trap1|68015|TNF receptor-associated protein 1
mm9_v1_chr12_-_12948513_12948641	0.234574	FOXD3.p2	BC005453|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK144126|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146913|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146696|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_008709|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm9_v1_chr1_+_182260606_182260741	0.233722	FOXD3.p2	NM_001081175|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	AK046612|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	AK053759|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	BC151160|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	BC157986|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B	BC158000|Itpkb|320404|inositol 1,4,5-trisphosphate 3-kinase B
mm9_v1_chr4_-_62180914_62181170	0.233546	FOXD3.p2	BC018236|Alad|17025|aminolevulinate, delta-, dehydratase	AK167673|Alad|17025|aminolevulinate, delta-, dehydratase	AK002300|Alad|17025|aminolevulinate, delta-, dehydratase	AK032908|Alad|17025|aminolevulinate, delta-, dehydratase	AK168119|Alad|17025|aminolevulinate, delta-, dehydratase	AK168132|Alad|17025|aminolevulinate, delta-, dehydratase	BC055930|Alad|17025|aminolevulinate, delta-, dehydratase	NM_008525|Alad|17025|aminolevulinate, delta-, dehydratase
mm9_v1_chr5_+_115729684_115729726	0.233465	FOXD3.p2	AK014348|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK045993|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK050334|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	BC052345|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK007496|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	NM_026504|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK009825|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)
mm9_v1_chr3_+_54916066_54916113	0.232658	FOXD3.p2	AK147760|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	NM_001144987|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm9_v1_chr2_+_127034072_127034128	0.23168	FOXD3.p2	AK081920|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	AK149291|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)
mm9_v1_chr15_-_96861590_96861647	0.231291	FOXD3.p2	BC024072|Slc38a4|69354|solute carrier family 38, member 4	BC024123|Slc38a4|69354|solute carrier family 38, member 4	AB055004|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr14_-_122364309_122364416	0.230642	FOXD3.p2	BC052868|Gpr183|321019|G protein-coupled receptor 183	AK141593|Gpr183|321019|G protein-coupled receptor 183	AK153216|Gpr183|321019|G protein-coupled receptor 183	AK087951|Gpr183|321019|G protein-coupled receptor 183	AK156005|Gpr183|321019|G protein-coupled receptor 183	AK156289|Gpr183|321019|G protein-coupled receptor 183	NM_183031|Gpr183|321019|G protein-coupled receptor 183	AK138693|Gpr183|321019|G protein-coupled receptor 183
mm9_v1_chr7_-_72516109_72516162	0.230462	FOXD3.p2	D14340|Tjp1|21872|tight junction protein 1	NM_001163574|Tjp1|21872|tight junction protein 1	NM_009386|Tjp1|21872|tight junction protein 1
mm9_v1_chr17_-_23908488_23908570	0.230339	FOXD3.p2	AK168389|Flywch1|224613|FLYWCH-type zinc finger 1	NM_153791|Flywch1|224613|FLYWCH-type zinc finger 1
mm9_v1_chr1_-_140743779_140743951	0.229682	FOXD3.p2	AB221560|Lhx9|16876|LIM homeobox protein 9	AK013209|Lhx9|16876|LIM homeobox protein 9
mm9_v1_chr16_-_18811669_18811731	0.229651	FOXD3.p2	AF081537|Cdc45|12544|cell division cycle 45 homolog (S. cerevisiae)	AF081538|Cdc45|12544|cell division cycle 45 homolog (S. cerevisiae)	AK147013|Cdc45|12544|cell division cycle 45 homolog (S. cerevisiae)	AJ223729|Cdc45|12544|cell division cycle 45 homolog (S. cerevisiae)	BC006856|Cdc45|12544|cell division cycle 45 homolog (S. cerevisiae)	AF098068|Cdc45|12544|cell division cycle 45 homolog (S. cerevisiae)	AK167850|Cdc45|12544|cell division cycle 45 homolog (S. cerevisiae)	BC028635|Cdc45|12544|cell division cycle 45 homolog (S. cerevisiae)	NM_001161623|Cdc45|12544|cell division cycle 45 homolog (S. cerevisiae)
mm9_v1_chr2_+_160471623_160471632	0.229563	FOXD3.p2	AK145538|Top1|21969|topoisomerase (DNA) I	NM_009408|Top1|21969|topoisomerase (DNA) I
mm9_v1_chr1_-_13579802_13579867	0.229054	FOXD3.p2	CT010238|Tram1|72265|translocating chain-associating membrane protein 1	AY029764|Tram1|72265|translocating chain-associating membrane protein 1	AK164347|Tram1|72265|translocating chain-associating membrane protein 1
mm9_v1_chr6_+_40421405_40421491	0.228709	FOXD3.p2	AK013425|Ssbp1|381760|single-stranded DNA binding protein 1	NM_028358|Ssbp1|381760|single-stranded DNA binding protein 1	NM_212468|Ssbp1|381760|single-stranded DNA binding protein 1	BC028648|Ssbp1|381760|single-stranded DNA binding protein 1	BC061183|Ssbp1|381760|single-stranded DNA binding protein 1	AK090242|Ssbp1|381760|single-stranded DNA binding protein 1	AK090272|Ssbp1|381760|single-stranded DNA binding protein 1	BC060290|Ssbp1|381760|single-stranded DNA binding protein 1	AK160556|Ssbp1|381760|single-stranded DNA binding protein 1
mm9_v1_chr4_+_155177707_155177763	0.228516	FOXD3.p2	AK011341|Mrpl20|66448|mitochondrial ribosomal protein L20	NM_025570|Mrpl20|66448|mitochondrial ribosomal protein L20	AK004053|Mrpl20|66448|mitochondrial ribosomal protein L20	AB049645|Mrpl20|66448|mitochondrial ribosomal protein L20	AK168665|Mrpl20|66448|mitochondrial ribosomal protein L20	BC039985|Mrpl20|66448|mitochondrial ribosomal protein L20	AK015199|Mrpl20|66448|mitochondrial ribosomal protein L20
mm9_v1_chr6_-_145024451_145024466	0.228203	FOXD3.p2	AK012821|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr16_-_95680888_95680987	0.22802	FOXD3.p2	AK142379|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm9_v1_chr2_+_139502919_139502927	0.227403	FOXD3.p2	AK044859|Ism1|319909|isthmin 1 homolog (zebrafish)
mm9_v1_chr1_+_182834384_182834472	0.227353	FOXD3.p2	NM_133705|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK007535|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK165618|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	BC006882|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK167622|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK150756|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK152302|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2
mm9_v1_chr11_-_97643718_97643767	0.227176	FOXD3.p2	NM_022891|Rpl23|65019|ribosomal protein L23
mm9_v1_chr5_+_104494153_104494232	0.226404	FOXD3.p2	
mm9_v1_chr1_-_170361525_170361683	0.225536	FOXD3.p2	BC002244|Pbx1|18514|pre B-cell leukemia transcription factor 1	AB221563|Pbx1|18514|pre B-cell leukemia transcription factor 1	HM369110|Pbx1|18514|pre B-cell leukemia transcription factor 1	L27453|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr8_-_81345034_81345050	0.225338	FOXD3.p2	AK158236|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_001191004|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_030145|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr2_-_84490666_84490763	0.225307	FOXD3.p2	NM_001085453|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	BC046589|Ctnnd1|12388|catenin (cadherin associated protein), delta 1
mm9_v1_chr11_+_120094240_120094260	0.225256	FOXD3.p2	AK147250|Bahcc1|268515|BAH domain and coiled-coil containing 1	NM_198423|Bahcc1|268515|BAH domain and coiled-coil containing 1
mm9_v1_chr18_-_36926866_36926900	0.225139	FOXD3.p2	
mm9_v1_chr2_+_34262387_34262397	0.225053	FOXD3.p2	BC096618|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr17_-_26645403_26645422	0.225033	FOXD3.p2	BC006967|Dusp1|19252|dual specificity phosphatase 1	X61940|Dusp1|19252|dual specificity phosphatase 1	AK159658|Dusp1|19252|dual specificity phosphatase 1	AK150433|Dusp1|19252|dual specificity phosphatase 1	AK152183|Dusp1|19252|dual specificity phosphatase 1	AK152905|Dusp1|19252|dual specificity phosphatase 1	AK159251|Dusp1|19252|dual specificity phosphatase 1	AK159363|Dusp1|19252|dual specificity phosphatase 1	AK159567|Dusp1|19252|dual specificity phosphatase 1	AK167602|Dusp1|19252|dual specificity phosphatase 1	AK168627|Dusp1|19252|dual specificity phosphatase 1	NM_013642|Dusp1|19252|dual specificity phosphatase 1	AK145903|Dusp1|19252|dual specificity phosphatase 1	AK152324|Dusp1|19252|dual specificity phosphatase 1
mm9_v1_chr4_+_99496130_99496190	0.224802	FOXD3.p2	BC112327|Efcab7|230500|EF-hand calcium binding domain 7	AK143777|Efcab7|230500|EF-hand calcium binding domain 7	BC020077|Efcab7|230500|EF-hand calcium binding domain 7	NM_145549|Efcab7|230500|EF-hand calcium binding domain 7
mm9_v1_chr17_+_34701239_34701309	0.224613	FOXD3.p2	NM_010929|Notch4|18132|Notch gene homolog 4 (Drosophila)	AK166261|Notch4|18132|Notch gene homolog 4 (Drosophila)	AK166493|Notch4|18132|Notch gene homolog 4 (Drosophila)	M80456|Notch4|18132|Notch gene homolog 4 (Drosophila)	BC138044|Notch4|18132|Notch gene homolog 4 (Drosophila)	BC145114|Notch4|18132|Notch gene homolog 4 (Drosophila)
mm9_v1_chr15_-_91022198_91022269	0.224519	FOXD3.p2	AK082588|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2	AK051445|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2	Z48670|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2	NM_011994|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2
mm9_v1_chr7_+_86040793_86040943	0.224501	FOXD3.p2	AK031972|Aen|68048|apoptosis enhancing nuclease	NM_001162939|Aen|68048|apoptosis enhancing nuclease	NM_026531|Aen|68048|apoptosis enhancing nuclease	AK165708|Aen|68048|apoptosis enhancing nuclease	AK012555|Aen|68048|apoptosis enhancing nuclease	AK090056|Aen|68048|apoptosis enhancing nuclease	AK166806|Aen|68048|apoptosis enhancing nuclease	AK167042|Aen|68048|apoptosis enhancing nuclease	AK076421|Aen|68048|apoptosis enhancing nuclease	AK167658|Aen|68048|apoptosis enhancing nuclease	AK017644|Aen|68048|apoptosis enhancing nuclease	AK089090|Aen|68048|apoptosis enhancing nuclease	BC022614|Aen|68048|apoptosis enhancing nuclease
mm9_v1_chr15_+_102126735_102126806	0.224451	FOXD3.p2	AK129072|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)	AY588413|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)	BC145844|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)	BC145846|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)
mm9_v1_chr12_+_72116953_72117066	0.224338	FOXD3.p2	NM_001081195|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	BC025436|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	AK050594|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	AK087354|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	BC080780|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	BC058209|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	AY116674|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr14_-_34195326_34195332	0.224332	FOXD3.p2	AK047936|Mapk8|26419|mitogen-activated protein kinase 8	AK053062|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr18_-_75120759_75120936	0.223953	FOXD3.p2	BC020991|Lipg|16891|lipase, endothelial	AF118768|Lipg|16891|lipase, endothelial	AK090224|Lipg|16891|lipase, endothelial	AK152430|Lipg|16891|lipase, endothelial	AK152161|Lipg|16891|lipase, endothelial	AK153541|Lipg|16891|lipase, endothelial	AK152872|Lipg|16891|lipase, endothelial	AK172101|Lipg|16891|lipase, endothelial	NM_010720|Lipg|16891|lipase, endothelial
mm9_v1_chr13_-_36209100_36209228	0.223544	FOXD3.p2	BC080772|Lyrm4|380840|LYR motif containing 4	BC034664|Lyrm4|380840|LYR motif containing 4	AK050553|Lyrm4|380840|LYR motif containing 4	NM_201358|Lyrm4|380840|LYR motif containing 4
mm9_v1_chr1_+_91351373_91351428	0.223387	FOXD3.p2	AK147503|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_001037136|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_178119|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK046523|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK129289|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chrX_-_165015162_165015164	0.223214	FOXD3.p2	AK147370|Frmpd4|333605|FERM and PDZ domain containing 4	NM_001033330|Frmpd4|333605|FERM and PDZ domain containing 4
mm9_v1_chr11_-_6344354_6344443	0.223097	FOXD3.p2	BC028539|H2afv|77605|H2A histone family, member V	AK021267|H2afv|77605|H2A histone family, member V	AK168110|H2afv|77605|H2A histone family, member V	BC147293|H2afv|77605|H2A histone family, member V	BC147294|H2afv|77605|H2A histone family, member V	BC147741|H2afv|77605|H2A histone family, member V	BC147751|H2afv|77605|H2A histone family, member V
mm9_v1_chr14_+_56097594_56097633	0.221938	FOXD3.p2	NM_001037938|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	NM_030686|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	BC054361|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4
mm9_v1_chr15_-_102501463_102501513	0.221763	FOXD3.p2	BC081437|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	AK002311|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	AK012279|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	AK007747|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	AK075793|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	NM_026468|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)
mm9_v1_chr9_+_37015872_37015947	0.220507	FOXD3.p2	AK161115|Tmem218|66279|transmembrane protein 218	BC034160|Tmem218|66279|transmembrane protein 218	NM_025464|Tmem218|66279|transmembrane protein 218	AK003010|Tmem218|66279|transmembrane protein 218	AK007575|Tmem218|66279|transmembrane protein 218	AK008902|Tmem218|66279|transmembrane protein 218
mm9_v1_chr10_-_106560683_106560723	0.220381	FOXD3.p2	BC113198|Acss3|380660|acyl-CoA synthetase short-chain family member 3	AK163897|Acss3|380660|acyl-CoA synthetase short-chain family member 3	NM_001142804|Acss3|380660|acyl-CoA synthetase short-chain family member 3	NM_198636|Acss3|380660|acyl-CoA synthetase short-chain family member 3	AK033376|Acss3|380660|acyl-CoA synthetase short-chain family member 3
mm9_v1_chr8_+_28153013_28153055	0.219118	FOXD3.p2	NM_001039077|Prosc|114863|proline synthetase co-transcribed	NM_001039078|Prosc|114863|proline synthetase co-transcribed	NM_054057|Prosc|114863|proline synthetase co-transcribed	BC061045|Prosc|114863|proline synthetase co-transcribed	AK147670|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr1_+_40082201_40082235	0.218175	FOXD3.p2	AK020498|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4	AK167747|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4	AK004047|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chrX_-_9793824_9794045	0.217686	FOXD3.p2	AJ238396|Rpgr|19893|retinitis pigmentosa GTPase regulator	AF044677|Rpgr|19893|retinitis pigmentosa GTPase regulator	BC012661|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK136298|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK017192|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK081631|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK038652|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177950|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177951|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177953|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177954|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_011285|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK029864|Rpgr|19893|retinitis pigmentosa GTPase regulator
mm9_v1_chr2_-_127614580_127614637	0.217352	FOXD3.p2	AF127180|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AF176210|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AJ243223|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	BC118953|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767895|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767896|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767897|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767898|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	NM_016902|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	EF174553|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	EF174554|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AK159627|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)
mm9_v1_chrX_+_146981989_146982012	0.217041	FOXD3.p2	AK002642|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK165262|Alas2|11656|aminolevulinic acid synthase 2, erythroid	M63244|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK165257|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK172094|Alas2|11656|aminolevulinic acid synthase 2, erythroid	M15268|Alas2|11656|aminolevulinic acid synthase 2, erythroid	BC150870|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chr7_+_97535516_97535523	0.216718	FOXD3.p2	AB057756|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr2_+_69588414_69588564	0.216473	FOXD3.p2	AK079931|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK045812|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr7_+_144629288_144629354	0.215745	FOXD3.p2	AK167672|Glrx3|30926|glutaredoxin 3	AK010354|Glrx3|30926|glutaredoxin 3	AK017371|Glrx3|30926|glutaredoxin 3	NM_023140|Glrx3|30926|glutaredoxin 3	AF118650|Glrx3|30926|glutaredoxin 3	AK051468|Glrx3|30926|glutaredoxin 3	BC087885|Glrx3|30926|glutaredoxin 3	AK152446|Glrx3|30926|glutaredoxin 3	AK152634|Glrx3|30926|glutaredoxin 3	AK155190|Glrx3|30926|glutaredoxin 3	BC033506|Glrx3|30926|glutaredoxin 3	AK147158|Glrx3|30926|glutaredoxin 3
mm9_v1_chr15_-_36070139_36070154	0.215473	FOXD3.p2	AK158239|Rgs22|626596|regulator of G-protein signalling 22	NM_001195748|Rgs22|626596|regulator of G-protein signalling 22
mm9_v1_chr15_+_57526212_57526467	0.215414	FOXD3.p2	NM_199449|Zhx2|387609|zinc fingers and homeoboxes 2	AK157631|Zhx2|387609|zinc fingers and homeoboxes 2	AK031782|Zhx2|387609|zinc fingers and homeoboxes 2	BC059178|Zhx2|387609|zinc fingers and homeoboxes 2
mm9_v1_chr10_-_26094990_26095024	0.215221	FOXD3.p2	AK045667|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	NM_172787|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK049597|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr5_+_32794685_32794762	0.215221	FOXD3.p2	AK017392|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr15_+_36103785_36103843	0.214273	FOXD3.p2	AK003023|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	AK018914|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	AK008136|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	AK008287|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	BC028543|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	S63758|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K
mm9_v1_chr4_-_46417054_46417104	0.214064	FOXD3.p2	AF269248|Hemgn|93966|hemogen	NM_053149|Hemgn|93966|hemogen	AK171906|Hemgn|93966|hemogen
mm9_v1_chr11_-_97627829_97627926	0.21373	FOXD3.p2	BC021478|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	BC079553|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK030628|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK035158|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK004983|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK017849|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	NM_026186|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
mm9_v1_chr18_+_67801208_67801282	0.213468	FOXD3.p2	AB031387|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK006069|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	NM_134138|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK167840|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK135578|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK077569|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	BC016606|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2
mm9_v1_chr9_+_108241599_108241672	0.213184	FOXD3.p2	AK150548|Gpx1|14775|glutathione peroxidase 1	AK002245|Gpx1|14775|glutathione peroxidase 1	AK010999|Gpx1|14775|glutathione peroxidase 1	AK011019|Gpx1|14775|glutathione peroxidase 1	AK028171|Gpx1|14775|glutathione peroxidase 1	AK154833|Gpx1|14775|glutathione peroxidase 1	AK160388|Gpx1|14775|glutathione peroxidase 1	NM_008160|Gpx1|14775|glutathione peroxidase 1	BC086649|Gpx1|14775|glutathione peroxidase 1
mm9_v1_chr10_+_57786213_57786415	0.212795	FOXD3.p2	AK014954|Lims1|110829|LIM and senescent cell antigen-like domains 1	NM_026148|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK088939|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK153346|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK151235|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK151938|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK152679|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK082932|Lims1|110829|LIM and senescent cell antigen-like domains 1	BC005621|Lims1|110829|LIM and senescent cell antigen-like domains 1	BC067393|Lims1|110829|LIM and senescent cell antigen-like domains 1
mm9_v1_chr9_-_112090150_112090479	0.212775	FOXD3.p2	BC128376|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AF324451|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_033264|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK159004|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK002950|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	BC027107|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK160860|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177615|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177620|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_028755|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr11_+_108781661_108781720	0.212423	FOXD3.p2	AK142333|Axin2|12006|axin2	NM_015732|Axin2|12006|axin2	BC057338|Axin2|12006|axin2	AK049192|Axin2|12006|axin2
mm9_v1_chr15_+_27396405_27396728	0.212272	FOXD3.p2	AK083135|Ank|11732|progressive ankylosis	DQ832285|Ank|11732|progressive ankylosis	NM_020332|Ank|11732|progressive ankylosis	BC042644|Ank|11732|progressive ankylosis	BC054379|Ank|11732|progressive ankylosis	AK148070|Ank|11732|progressive ankylosis	AF001532|Ank|11732|progressive ankylosis	AF274752|Ank|11732|progressive ankylosis
mm9_v1_chr3_-_157587998_157588029	0.211794	FOXD3.p2	AK002480|Cth|107869|cystathionase (cystathionine gamma-lyase)	BC019483|Cth|107869|cystathionase (cystathionine gamma-lyase)	AY083352|Cth|107869|cystathionase (cystathionine gamma-lyase)	NM_145953|Cth|107869|cystathionase (cystathionine gamma-lyase)
mm9_v1_chr15_-_82953171_82953235	0.211556	FOXD3.p2	AK036247|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK159553|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK003698|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168850|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK153565|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK032596|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK146821|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168189|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK088456|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	NM_029101|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm9_v1_chr8_-_48799252_48799297	0.211212	FOXD3.p2	AK048437|Cdkn2aip|70925|CDKN2A interacting protein	AK078329|Cdkn2aip|70925|CDKN2A interacting protein	AK167684|Cdkn2aip|70925|CDKN2A interacting protein	AK133831|Cdkn2aip|70925|CDKN2A interacting protein	NM_172407|Cdkn2aip|70925|CDKN2A interacting protein	AK035426|Cdkn2aip|70925|CDKN2A interacting protein	AK089057|Cdkn2aip|70925|CDKN2A interacting protein
mm9_v1_chr1_+_162125349_162125420	0.211046	FOXD3.p2	AK007673|Mrps14|64659|mitochondrial ribosomal protein S14	AK010242|Mrps14|64659|mitochondrial ribosomal protein S14	AK144195|Mrps14|64659|mitochondrial ribosomal protein S14	AK083352|Mrps14|64659|mitochondrial ribosomal protein S14	NM_025474|Mrps14|64659|mitochondrial ribosomal protein S14	BC044057|Mrps14|64659|mitochondrial ribosomal protein S14
mm9_v1_chr17_+_85025830_85025873	0.210929	FOXD3.p2	BC030450|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1	BC039070|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1	NM_172256|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1	AK008822|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1
mm9_v1_chr1_+_72354084_72354123	0.210645	FOXD3.p2	X66323|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AF166486|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK010416|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK167312|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK168913|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK169838|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	BC029218|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5
mm9_v1_chr9_-_75407338_75407491	0.21042	FOXD3.p2	AF237630|Tmod3|50875|tropomodulin 3	AF177172|Tmod3|50875|tropomodulin 3	BC082595|Tmod3|50875|tropomodulin 3	AK167723|Tmod3|50875|tropomodulin 3	AK017725|Tmod3|50875|tropomodulin 3	AK050372|Tmod3|50875|tropomodulin 3	AK082971|Tmod3|50875|tropomodulin 3	AK147017|Tmod3|50875|tropomodulin 3	AK169218|Tmod3|50875|tropomodulin 3	NM_016963|Tmod3|50875|tropomodulin 3
mm9_v1_chr10_-_116782524_116782604	0.210137	FOXD3.p2	AK086495|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr5_-_93612145_93612203	0.20989	FOXD3.p2	AK179364|Ccni|12453|cyclin I
mm9_v1_chr7_-_56136965_56137089	0.20973	FOXD3.p2	AY957576|E2f8|108961|E2F transcription factor 8
mm9_v1_chr6_-_81915918_81915957	0.209386	FOXD3.p2	BC020315|Mrpl19|56284|mitochondrial ribosomal protein L19	BC043921|Mrpl19|56284|mitochondrial ribosomal protein L19	BC061064|Mrpl19|56284|mitochondrial ribosomal protein L19	AK030793|Mrpl19|56284|mitochondrial ribosomal protein L19	AK021180|Mrpl19|56284|mitochondrial ribosomal protein L19	AK050637|Mrpl19|56284|mitochondrial ribosomal protein L19	NM_026490|Mrpl19|56284|mitochondrial ribosomal protein L19	AK141554|Mrpl19|56284|mitochondrial ribosomal protein L19
mm9_v1_chr10_-_80522871_80522963	0.20893	FOXD3.p2	AK039966|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	BC003836|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	NM_024499|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK051005|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK079168|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK165557|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm9_v1_chr4_-_148511650_148511708	0.208593	FOXD3.p2	BC138926|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	BC138927|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK011725|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	BC048521|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK012995|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK013038|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	NM_027263|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1
mm9_v1_chr13_+_36209724_36209798	0.208478	FOXD3.p2	AK020164|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK170986|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK076259|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK054370|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	BC002147|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK013211|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr5_-_143579060_143579087	0.208325	FOXD3.p2	BC049818|Tnrc18|231861|trinucleotide repeat containing 18	NM_001122730|Tnrc18|231861|trinucleotide repeat containing 18	NM_178242|Tnrc18|231861|trinucleotide repeat containing 18
mm9_v1_chr6_-_142271469_142271500	0.208305	FOXD3.p2	AF240694|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	NM_130861|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	AK029706|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5
mm9_v1_chr13_-_76081244_76081314	0.207939	FOXD3.p2	BC005664|Rhobtb3|73296|Rho-related BTB domain containing 3	BC050836|Rhobtb3|73296|Rho-related BTB domain containing 3	NM_028493|Rhobtb3|73296|Rho-related BTB domain containing 3	AK129234|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr17_-_80295336_80295462	0.207841	FOXD3.p2	AK135988|Atl2|56298|atlastin GTPase 2	BC060501|Atl2|56298|atlastin GTPase 2	NM_019717|Atl2|56298|atlastin GTPase 2	AK038697|Atl2|56298|atlastin GTPase 2	AK043907|Atl2|56298|atlastin GTPase 2	AK008381|Atl2|56298|atlastin GTPase 2	NM_178050|Atl2|56298|atlastin GTPase 2
mm9_v1_chr5_-_116474254_116474473	0.207363	FOXD3.p2	AK088250|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit	BC016398|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit	NM_031869|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit	AK153552|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit
mm9_v1_chr1_-_130256055_130256293	0.20734	FOXD3.p2	AK188642|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK177954|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK180079|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK183692|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK194535|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK210474|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK211618|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK150726|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK146896|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	BC051658|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	BC057584|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK145520|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK146770|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK146272|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK088493|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	D86726|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	NM_008567|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	BC050886|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
mm9_v1_chr6_-_128380651_128380781	0.206648	FOXD3.p2	
mm9_v1_chr2_-_37225800_37225813	0.206388	FOXD3.p2	AK046886|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2
mm9_v1_chr7_+_19967358_19967392	0.206336	FOXD3.p2	AK141692|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK082323|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK145969|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK082761|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	NM_007949|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	BC034517|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2
mm9_v1_chr5_+_53174293_53174344	0.206063	FOXD3.p2	AK138997|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK049511|Zcchc4|78796|zinc finger, CCHC domain containing 4	NM_030185|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK019621|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK143805|Zcchc4|78796|zinc finger, CCHC domain containing 4
mm9_v1_chr3_+_63780020_63780051	0.20527	FOXD3.p2	AK146654|Gmps|229363|guanine monophosphate synthetase
mm9_v1_chr8_+_13757654_13757836	0.204865	FOXD3.p2	AK147938|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK167965|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK158014|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	BC026606|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	NM_027276|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK168978|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)
mm9_v1_chr8_-_18741455_18741532	0.204454	FOXD3.p2	BC138309|Angpt2|11601|angiopoietin 2	BC138313|Angpt2|11601|angiopoietin 2	AF004326|Angpt2|11601|angiopoietin 2	BC027216|Angpt2|11601|angiopoietin 2	AK048622|Angpt2|11601|angiopoietin 2	AK156132|Angpt2|11601|angiopoietin 2
mm9_v1_chr1_-_194681914_194681945	0.20433	FOXD3.p2	BC060251|Sertad4|214791|SERTA domain containing 4	NM_198247|Sertad4|214791|SERTA domain containing 4
mm9_v1_chr19_-_58528838_58529066	0.204171	FOXD3.p2	AB000800|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	BC040251|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	BC054378|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	NM_010279|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	BC011532|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	AF015172|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1
mm9_v1_chr3_-_68808386_68808491	0.203836	FOXD3.p2	BC034101|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK042231|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK129339|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK147305|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	NM_026641|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)
mm9_v1_chr4_-_91066674_91066674	0.203646	FOXD3.p2	BC049125|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	BC058393|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_207685|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr5_-_134932407_134932628	0.203601	FOXD3.p2	BC057091|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	BC058964|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF247161|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497637|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497638|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497639|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343348|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343351|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497640|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK078488|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343350|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497642|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343349|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497641|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK051310|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF260133|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030287|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030288|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030289|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF257475|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK147196|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	BC050822|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081462|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081463|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081464|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081466|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081467|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081468|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081469|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081470|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_020331|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1
mm9_v1_chr10_+_20059547_20059574	0.203306	FOXD3.p2	AK169491|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr9_+_51894884_51895031	0.203267	FOXD3.p2	AK216134|Rdx|19684|radixin
mm9_v1_chr16_+_44139908_44140168	0.203125	FOXD3.p2	NM_028108|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK167141|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK168394|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC057117|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK135658|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK156791|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK011160|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK145345|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC046283|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC004086|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK198408|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC055846|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm9_v1_chr11_+_77499638_77499656	0.202689	FOXD3.p2	AK030113|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK160601|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	NM_001024205|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK170764|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK122494|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2
mm9_v1_chr8_+_87356149_87356307	0.202507	FOXD3.p2	AK002738|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK003314|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK019570|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK028227|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC061069|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	NM_183358|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK009723|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC022592|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm9_v1_chr1_-_173224861_173224966	0.201815	FOXD3.p2	AK011260|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1	AK003070|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1
mm9_v1_chr15_-_102552494_102552522	0.200866	FOXD3.p2	AK018734|Calcoco1|67488|calcium binding and coiled coil domain 1	AK007393|Calcoco1|67488|calcium binding and coiled coil domain 1	BC054783|Calcoco1|67488|calcium binding and coiled coil domain 1	AK220400|Calcoco1|67488|calcium binding and coiled coil domain 1	AK035598|Calcoco1|67488|calcium binding and coiled coil domain 1
mm9_v1_chr18_+_36452279_36452280	0.200022	FOXD3.p2	
mm9_v1_chr12_-_47919695_47919761	0.199859	FOXD3.p2	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr16_+_59471600_59471691	0.199853	FOXD3.p2	NM_025910|Mina|67014|myc induced nuclear antigen	AK007810|Mina|67014|myc induced nuclear antigen	AK032595|Mina|67014|myc induced nuclear antigen	AK013451|Mina|67014|myc induced nuclear antigen	AK014426|Mina|67014|myc induced nuclear antigen	AK019117|Mina|67014|myc induced nuclear antigen	AK031671|Mina|67014|myc induced nuclear antigen	BC025109|Mina|67014|myc induced nuclear antigen	BC058242|Mina|67014|myc induced nuclear antigen
mm9_v1_chr11_+_58680717_58680792	0.199519	FOXD3.p2	AK030099|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	AK134479|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	BC058081|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	NM_172403|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene
mm9_v1_chr15_+_85036434_85036600	0.199481	FOXD3.p2	AK083573|Fbln1|14114|fibulin 1	AK086451|Fbln1|14114|fibulin 1	NM_010180|Fbln1|14114|fibulin 1	X70854|Fbln1|14114|fibulin 1	AK035388|Fbln1|14114|fibulin 1	AK159646|Fbln1|14114|fibulin 1	AK085989|Fbln1|14114|fibulin 1	AK137511|Fbln1|14114|fibulin 1	EU543224|Fbln1|14114|fibulin 1	BC007140|Fbln1|14114|fibulin 1	AK183901|Fbln1|14114|fibulin 1	AK188770|Fbln1|14114|fibulin 1
mm9_v1_chr15_+_57743727_57743856	0.19918	FOXD3.p2	NM_001081396|Wdr67|210544|WD repeat domain 67	NM_001167679|Wdr67|210544|WD repeat domain 67	AB185844|Wdr67|210544|WD repeat domain 67	AK154264|Wdr67|210544|WD repeat domain 67	AK171024|Wdr67|210544|WD repeat domain 67	BC050039|Wdr67|210544|WD repeat domain 67	BC066830|Wdr67|210544|WD repeat domain 67
mm9_v1_chr7_-_99889932_99889979	0.198682	FOXD3.p2	AK014157|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK051992|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK018467|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK019505|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084903|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084084|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK145781|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene
mm9_v1_chr6_-_119367498_119367553	0.198662	FOXD3.p2	BC064109|Adipor2|68465|adiponectin receptor 2	AY424291|Adipor2|68465|adiponectin receptor 2	BC024094|Adipor2|68465|adiponectin receptor 2	NM_197985|Adipor2|68465|adiponectin receptor 2	AK046591|Adipor2|68465|adiponectin receptor 2	AK134787|Adipor2|68465|adiponectin receptor 2	AK160534|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr15_+_102126686_102126729	0.198387	FOXD3.p2	BC082603|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)	NM_001014976|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)
mm9_v1_chr17_+_37095536_37095635	0.198369	FOXD3.p2	BC027007|Znrd1as|76416|ZNRD1 antisense RNA	NM_029602|Znrd1as|76416|ZNRD1 antisense RNA	AK006236|Znrd1as|76416|ZNRD1 antisense RNA	AK161503|Znrd1as|76416|ZNRD1 antisense RNA
mm9_v1_chrX_+_146981959_146981987	0.198148	FOXD3.p2	NM_001102446|Alas2|11656|aminolevulinic acid synthase 2, erythroid	NM_009653|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK077610|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chr3_-_103546233_103546253	0.197895	FOXD3.p2	AK031871|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr12_-_101121613_101121712	0.19787	FOXD3.p2	BC049109|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK035051|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK011836|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK011507|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	NM_030172|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK132473|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene
mm9_v1_chr9_-_82869081_82869124	0.197532	FOXD3.p2	NM_001081216|Phip|83946|pleckstrin homology domain interacting protein	AK032797|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr1_-_45560001_45560126	0.197526	FOXD3.p2	AK147328|Col5a2|12832|collagen, type V, alpha 2	NM_007737|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr9_+_75623367_75623480	0.197459	FOXD3.p2	BC141283|Bmp5|12160|bone morphogenetic protein 5
mm9_v1_chr12_-_82695944_82695966	0.197192	FOXD3.p2	BC013096|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	NM_027213|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK171784|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr2_-_119613164_119613274	0.197088	FOXD3.p2	BC117973|Rpap1|68925|RNA polymerase II associated protein 1	BC117974|Rpap1|68925|RNA polymerase II associated protein 1	AK190910|Rpap1|68925|RNA polymerase II associated protein 1	AK122505|Rpap1|68925|RNA polymerase II associated protein 1	BC088899|Rpap1|68925|RNA polymerase II associated protein 1	AK171233|Rpap1|68925|RNA polymerase II associated protein 1	AK042776|Rpap1|68925|RNA polymerase II associated protein 1	AK154007|Rpap1|68925|RNA polymerase II associated protein 1	AK161487|Rpap1|68925|RNA polymerase II associated protein 1	AK164658|Rpap1|68925|RNA polymerase II associated protein 1	AK166232|Rpap1|68925|RNA polymerase II associated protein 1	AK167589|Rpap1|68925|RNA polymerase II associated protein 1	NM_001163701|Rpap1|68925|RNA polymerase II associated protein 1	NM_177294|Rpap1|68925|RNA polymerase II associated protein 1
mm9_v1_chr15_-_99705812_99705887	0.196966	FOXD3.p2	BC031490|Lima1|65970|LIM domain and actin binding 1	AK028311|Lima1|65970|LIM domain and actin binding 1	AK049350|Lima1|65970|LIM domain and actin binding 1	AF307845|Lima1|65970|LIM domain and actin binding 1	AK078959|Lima1|65970|LIM domain and actin binding 1	NM_001113545|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr10_-_43260744_43260803	0.196436	FOXD3.p2	AK008795|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK163304|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	BC013506|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK006199|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	NM_026411|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK007370|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene
mm9_v1_chr16_+_17331507_17331521	0.19611	FOXD3.p2	BC089610|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr3_+_102862151_102862295	0.196102	FOXD3.p2	X13664|Nras|18176|neuroblastoma ras oncogene	NM_010937|Nras|18176|neuroblastoma ras oncogene	AK011704|Nras|18176|neuroblastoma ras oncogene	AK165960|Nras|18176|neuroblastoma ras oncogene	AK150357|Nras|18176|neuroblastoma ras oncogene	BC058755|Nras|18176|neuroblastoma ras oncogene	BC014704|Nras|18176|neuroblastoma ras oncogene	BC051443|Nras|18176|neuroblastoma ras oncogene
mm9_v1_chr8_-_86773599_86773659	0.195717	FOXD3.p2	BC024662|D8Ertd738e|101966|DNA segment, Chr 8, ERATO Doi 738, expressed	AK146163|D8Ertd738e|101966|DNA segment, Chr 8, ERATO Doi 738, expressed	AK167785|D8Ertd738e|101966|DNA segment, Chr 8, ERATO Doi 738, expressed	NM_001007571|D8Ertd738e|101966|DNA segment, Chr 8, ERATO Doi 738, expressed
mm9_v1_chr4_+_116692006_116692070	0.195702	FOXD3.p2	NM_001111277|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	NM_175135|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172173|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK145856|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172302|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3
mm9_v1_chr19_+_8967475_8967547	0.195552	FOXD3.p2	NM_176843|Ints5|109077|integrator complex subunit 5	BC039214|Ints5|109077|integrator complex subunit 5	AK144770|Ints5|109077|integrator complex subunit 5	AK166149|Ints5|109077|integrator complex subunit 5	AK168795|Ints5|109077|integrator complex subunit 5	AK143868|Ints5|109077|integrator complex subunit 5	AK155499|Ints5|109077|integrator complex subunit 5	AK170584|Ints5|109077|integrator complex subunit 5	AK172260|Ints5|109077|integrator complex subunit 5
mm9_v1_chr10_-_53349799_53349820	0.194717	FOXD3.p2	AK018494|Mcm9|71567|minichromosome maintenance complex component 9
mm9_v1_chr6_-_87793459_87793650	0.194666	FOXD3.p2	AK211658|Cnbp|12785|cellular nucleic acid binding protein	BC003805|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr11_-_101163456_101163604	0.194574	FOXD3.p2	AK189474|Becn1|56208|beclin 1, autophagy related	AK178460|Becn1|56208|beclin 1, autophagy related	AK151531|Becn1|56208|beclin 1, autophagy related	BC005770|Becn1|56208|beclin 1, autophagy related	BC027738|Becn1|56208|beclin 1, autophagy related	AK028851|Becn1|56208|beclin 1, autophagy related	AK083800|Becn1|56208|beclin 1, autophagy related	AK031501|Becn1|56208|beclin 1, autophagy related	AK032176|Becn1|56208|beclin 1, autophagy related	AK050329|Becn1|56208|beclin 1, autophagy related	NM_019584|Becn1|56208|beclin 1, autophagy related	AK077392|Becn1|56208|beclin 1, autophagy related
mm9_v1_chr12_-_92622769_92622848	0.194268	FOXD3.p2	BC079647|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK054363|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK017333|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK033284|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK054164|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK029215|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	BC076614|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	NM_181815|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene
mm9_v1_chr3_+_137004089_137004128	0.194267	FOXD3.p2	AB034693|Emcn|59308|endomucin	AF060883|Emcn|59308|endomucin	AK164422|Emcn|59308|endomucin
mm9_v1_chr10_+_59568976_59569004	0.194251	FOXD3.p2	AJ278999|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	BC057324|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	NM_052994|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm9_v1_chr4_-_58999972_58999992	0.194208	FOXD3.p2	AK011962|Ptgr1|67103|prostaglandin reductase 1	AK134440|Ptgr1|67103|prostaglandin reductase 1	AK010888|Ptgr1|67103|prostaglandin reductase 1
mm9_v1_chr9_+_20692618_20692740	0.194166	FOXD3.p2	NM_145610|Ppan|235036|peter pan homolog (Drosophila)	BC014688|Ppan|235036|peter pan homolog (Drosophila)	AK085695|Ppan|235036|peter pan homolog (Drosophila)	AK039027|Ppan|235036|peter pan homolog (Drosophila)	AK172615|Ppan|235036|peter pan homolog (Drosophila)	AK171672|Ppan|235036|peter pan homolog (Drosophila)	BC059277|Ppan|235036|peter pan homolog (Drosophila)
mm9_v1_chr3_+_55265654_55265683	0.194109	FOXD3.p2	NM_001111051|Dclk1|13175|doublecortin-like kinase 1	NM_001111052|Dclk1|13175|doublecortin-like kinase 1	NM_001195539|Dclk1|13175|doublecortin-like kinase 1	NM_001195540|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr10_-_36858426_36858478	0.1941	FOXD3.p2	
mm9_v1_chr7_+_119167048_119167104	0.193887	FOXD3.p2	AK082114|Usp47|74996|ubiquitin specific peptidase 47	BC108425|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chr14_+_120830603_120830641	0.193812	FOXD3.p2	AK003316|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr11_-_97643692_97643709	0.193762	FOXD3.p2	AK012694|Rpl23|65019|ribosomal protein L23	AK018730|Rpl23|65019|ribosomal protein L23	AK150671|Rpl23|65019|ribosomal protein L23	AK002579|Rpl23|65019|ribosomal protein L23	AK010680|Rpl23|65019|ribosomal protein L23
mm9_v1_chr3_-_108707417_108707441	0.193727	FOXD3.p2	AK007374|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr4_+_106721017_106721031	0.193535	FOXD3.p2	AK144320|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr8_+_59990639_59990759	0.193237	FOXD3.p2	NM_008252|Hmgb2|97165|high mobility group box 2	AK012568|Hmgb2|97165|high mobility group box 2	AK146212|Hmgb2|97165|high mobility group box 2	AK151164|Hmgb2|97165|high mobility group box 2	AK008443|Hmgb2|97165|high mobility group box 2	AK153858|Hmgb2|97165|high mobility group box 2	Z46757|Hmgb2|97165|high mobility group box 2	AK003773|Hmgb2|97165|high mobility group box 2	AK011467|Hmgb2|97165|high mobility group box 2	AK135296|Hmgb2|97165|high mobility group box 2	AK135297|Hmgb2|97165|high mobility group box 2	BC046759|Hmgb2|97165|high mobility group box 2	BC083108|Hmgb2|97165|high mobility group box 2	BC002050|Hmgb2|97165|high mobility group box 2
mm9_v1_chr4_-_87452140_87452217	0.192989	FOXD3.p2	AK147009|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK008707|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK019458|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_029931|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr16_-_91647153_91647201	0.192852	FOXD3.p2	AK146478|Gart|14450|phosphoribosylglycinamide formyltransferase	BC070465|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168876|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168445|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168864|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168458|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168501|Gart|14450|phosphoribosylglycinamide formyltransferase	U01023|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168724|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168796|Gart|14450|phosphoribosylglycinamide formyltransferase	AK146355|Gart|14450|phosphoribosylglycinamide formyltransferase
mm9_v1_chr7_-_29185514_29185554	0.192517	FOXD3.p2	AK133691|Samd4b|233033|sterile alpha motif domain containing 4B
mm9_v1_chr11_-_54601093_54601128	0.191908	FOXD3.p2	BC048935|Cdc42se2|72729|CDC42 small effector 2	AK080473|Cdc42se2|72729|CDC42 small effector 2	AK146313|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr3_+_94641479_94641499	0.191464	FOXD3.p2	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr8_+_109417539_109417610	0.190266	FOXD3.p2	NM_011574|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	BC068113|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK144455|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK146263|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK150862|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK168470|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK173318|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)
mm9_v1_chr9_-_98502063_98502097	0.189464	FOXD3.p2	BC037653|Mrps22|64655|mitochondrial ribosomal protein S22	BC051198|Mrps22|64655|mitochondrial ribosomal protein S22	AK013925|Mrps22|64655|mitochondrial ribosomal protein S22	AK154600|Mrps22|64655|mitochondrial ribosomal protein S22	NM_025485|Mrps22|64655|mitochondrial ribosomal protein S22
mm9_v1_chr2_-_154429368_154429412	0.189051	FOXD3.p2	BC025796|Pxmp4|59038|peroxisomal membrane protein 4	AJ271476|Pxmp4|59038|peroxisomal membrane protein 4	AK143785|Pxmp4|59038|peroxisomal membrane protein 4	AK156743|Pxmp4|59038|peroxisomal membrane protein 4	AK050647|Pxmp4|59038|peroxisomal membrane protein 4	NM_021534|Pxmp4|59038|peroxisomal membrane protein 4
mm9_v1_chr11_-_34647016_34647097	0.188902	FOXD3.p2	AK139553|Ccdc99|70385|coiled-coil domain containing 99	AK163303|Ccdc99|70385|coiled-coil domain containing 99
mm9_v1_chr10_-_83989221_83989289	0.188594	FOXD3.p2	AK205593|Ckap4|216197|cytoskeleton-associated protein 4	AK212843|Ckap4|216197|cytoskeleton-associated protein 4	AK217343|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr7_-_34981664_34981695	0.188211	FOXD3.p2	BC115797|Pdcd2l|68079|programmed cell death 2-like	AK077948|Pdcd2l|68079|programmed cell death 2-like	NM_026549|Pdcd2l|68079|programmed cell death 2-like	AK151495|Pdcd2l|68079|programmed cell death 2-like	AK003339|Pdcd2l|68079|programmed cell death 2-like	AK154811|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chrX_-_150130711_150130822	0.18799	FOXD3.p2	AK046557|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK050097|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK046708|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK085035|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	BC064459|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	NM_175429|Kctd12b|207474|potassium channel tetramerisation domain containing 12b
mm9_v1_chr17_+_10512744_10512791	0.187919	FOXD3.p2	AK012373|B930003M22Rik|100526796|RIKEN cDNA B930003M22 gene	AK046926|B930003M22Rik|100526796|RIKEN cDNA B930003M22 gene
mm9_v1_chr2_-_66278870_66278908	0.187539	FOXD3.p2	AK046001|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	AK134744|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	NM_018733|Scn1a|20265|sodium channel, voltage-gated, type I, alpha
mm9_v1_chr4_-_136454674_136454768	0.186637	FOXD3.p2	X58861|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159343|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK002655|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK136737|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK150771|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159210|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	BC002086|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	NM_007572|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide
mm9_v1_chr4_-_138686896_138687027	0.185268	FOXD3.p2	AK008362|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK008449|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK009189|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK011553|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK004466|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	BC055791|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK153063|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK167818|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK009528|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK152509|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK159100|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK030343|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	NM_001163006|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene
mm9_v1_chr17_+_47278151_47278226	0.184907	FOXD3.p2	AK155049|Trerf1|224829|transcriptional regulating factor 1	AK170342|Trerf1|224829|transcriptional regulating factor 1
mm9_v1_chr15_-_3945704_3945774	0.184849	FOXD3.p2	AK045350|AW549877|106064|expressed sequence AW549877	AK154940|AW549877|106064|expressed sequence AW549877	NM_145930|AW549877|106064|expressed sequence AW549877
mm9_v1_chr6_-_118369383_118369491	0.184755	FOXD3.p2	AK133013|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK129082|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK135031|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK028266|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	BC057054|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	NM_194339|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK134315|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK162178|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)
mm9_v1_chr11_-_54601163_54601250	0.184448	FOXD3.p2	AK145931|Cdc42se2|72729|CDC42 small effector 2	AK160934|Cdc42se2|72729|CDC42 small effector 2	NM_178626|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr1_-_196957694_196957780	0.1842	FOXD3.p2	AK017702|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK004825|Cr1l|12946|complement component (3b/4b) receptor 1-like	NM_013499|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr14_+_27399015_27399092	0.183762	FOXD3.p2	AK054295|Fam116a|211922|family with sequence similarity 116, member A	NM_001134465|Fam116a|211922|family with sequence similarity 116, member A	NM_145969|Fam116a|211922|family with sequence similarity 116, member A	AK132219|Fam116a|211922|family with sequence similarity 116, member A	AK131163|Fam116a|211922|family with sequence similarity 116, member A	BC025603|Fam116a|211922|family with sequence similarity 116, member A	AK161908|Fam116a|211922|family with sequence similarity 116, member A	AK054197|Fam116a|211922|family with sequence similarity 116, member A
mm9_v1_chr11_+_70338865_70338909	0.183007	FOXD3.p2	AK132042|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK078437|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK167123|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK167227|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	BC013897|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr9_+_92502076_92502169	0.182724	FOXD3.p2	
mm9_v1_chr6_-_92133945_92134035	0.182517	FOXD3.p2	AK131114|Mrps25|64658|mitochondrial ribosomal protein S25	AK013196|Mrps25|64658|mitochondrial ribosomal protein S25	AK004037|Mrps25|64658|mitochondrial ribosomal protein S25	BC022953|Mrps25|64658|mitochondrial ribosomal protein S25	NM_025578|Mrps25|64658|mitochondrial ribosomal protein S25
mm9_v1_chr5_-_101249953_101249994	0.182156	FOXD3.p2	AK051816|Fam175a|70681|family with sequence similarity 175, member A	NM_172405|Fam175a|70681|family with sequence similarity 175, member A	BC029845|Fam175a|70681|family with sequence similarity 175, member A	BC043923|Fam175a|70681|family with sequence similarity 175, member A	AK042001|Fam175a|70681|family with sequence similarity 175, member A	AK042339|Fam175a|70681|family with sequence similarity 175, member A	AK014420|Fam175a|70681|family with sequence similarity 175, member A	AK167540|Fam175a|70681|family with sequence similarity 175, member A
mm9_v1_chr11_+_17111895_17111966	0.182092	FOXD3.p2	NM_178909|Wdr92|103784|WD repeat domain 92	AK088218|Wdr92|103784|WD repeat domain 92	AK047691|Wdr92|103784|WD repeat domain 92	AK142228|Wdr92|103784|WD repeat domain 92	AK033294|Wdr92|103784|WD repeat domain 92	BC096540|Wdr92|103784|WD repeat domain 92
mm9_v1_chr15_-_51823107_51823255	0.182069	FOXD3.p2	AK004746|Rad21|19357|RAD21 homolog (S. pombe)	AK128984|Rad21|19357|RAD21 homolog (S. pombe)	AK168896|Rad21|19357|RAD21 homolog (S. pombe)
mm9_v1_chr15_-_99650502_99650572	0.181999	FOXD3.p2	AF307844|Lima1|65970|LIM domain and actin binding 1	AK028186|Lima1|65970|LIM domain and actin binding 1	AK031698|Lima1|65970|LIM domain and actin binding 1	AK132314|Lima1|65970|LIM domain and actin binding 1	AK085065|Lima1|65970|LIM domain and actin binding 1	NM_023063|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr17_-_86544514_86544514	0.181634	FOXD3.p2	AK021298|Srbd1|78586|S1 RNA binding domain 1	NM_030133|Srbd1|78586|S1 RNA binding domain 1
mm9_v1_chr19_+_55328356_55328506	0.180379	FOXD3.p2	AK151378|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	BC031544|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK161024|Acsl5|433256|acyl-CoA synthetase long-chain family member 5
mm9_v1_chr10_-_13043959_13044096	0.180257	FOXD3.p2	BC130264|Phactr2|215789|phosphatase and actin regulator 2	AK142930|Phactr2|215789|phosphatase and actin regulator 2	NM_001033257|Phactr2|215789|phosphatase and actin regulator 2	NM_001195096|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr15_+_85690136_85690174	0.179472	FOXD3.p2	AK012870|Gtse1|29870|G two S phase expressed protein 1	NM_001168672|Gtse1|29870|G two S phase expressed protein 1	AK081582|Gtse1|29870|G two S phase expressed protein 1
mm9_v1_chr7_-_35841450_35841562	0.179077	FOXD3.p2	AK171859|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	X55499|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AK157391|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AK159544|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AB012273|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	BC011319|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr15_-_91022165_91022189	0.178925	FOXD3.p2	BC019187|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2
mm9_v1_chr16_-_14159346_14159388	0.178269	FOXD3.p2	AK158881|4921513D23Rik|223989|RIKEN cDNA 4921513D23 gene	NM_001081154|4921513D23Rik|223989|RIKEN cDNA 4921513D23 gene
mm9_v1_chr10_-_126959446_126959510	0.177926	FOXD3.p2	AK037339|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	BC004825|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK051207|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	NM_028230|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK162421|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)
mm9_v1_chr1_+_58052814_58052910	0.177662	FOXD3.p2	AK042448|Sgol2|68549|shugoshin-like 2 (S. pombe)	NM_199007|Sgol2|68549|shugoshin-like 2 (S. pombe)	BC023855|Sgol2|68549|shugoshin-like 2 (S. pombe)	AK079371|Sgol2|68549|shugoshin-like 2 (S. pombe)	BC052742|Sgol2|68549|shugoshin-like 2 (S. pombe)	AK017868|Sgol2|68549|shugoshin-like 2 (S. pombe)
mm9_v1_chrX_+_9829439_9829558	0.177553	FOXD3.p2	AK050930|Otc|18416|ornithine transcarbamylase	NM_008769|Otc|18416|ornithine transcarbamylase	BC024893|Otc|18416|ornithine transcarbamylase	M17030|Otc|18416|ornithine transcarbamylase
mm9_v1_chr7_+_128061297_128061331	0.177177	FOXD3.p2	AK012184|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK144721|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK146279|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK159723|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	BC037637|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	BC028924|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr9_+_27598853_27598893	0.177169	FOXD3.p2	BC076581|Opcml|330908|opioid binding protein/cell adhesion molecule-like	NM_177906|Opcml|330908|opioid binding protein/cell adhesion molecule-like	AK013792|Opcml|330908|opioid binding protein/cell adhesion molecule-like
mm9_v1_chr11_+_54716354_54716435	0.176851	FOXD3.p2	NM_001083929|Gpx3|14778|glutathione peroxidase 3	AK002219|Gpx3|14778|glutathione peroxidase 3	AK002262|Gpx3|14778|glutathione peroxidase 3	AK004942|Gpx3|14778|glutathione peroxidase 3	NM_008161|Gpx3|14778|glutathione peroxidase 3	AK146760|Gpx3|14778|glutathione peroxidase 3	BC037027|Gpx3|14778|glutathione peroxidase 3
mm9_v1_chr1_-_153275461_153275510	0.175898	FOXD3.p2	BC028449|1200016B10Rik|66875|RIKEN cDNA 1200016B10 gene	BC060204|1200016B10Rik|66875|RIKEN cDNA 1200016B10 gene	AK013686|1200016B10Rik|66875|RIKEN cDNA 1200016B10 gene	AK004803|1200016B10Rik|66875|RIKEN cDNA 1200016B10 gene
mm9_v1_chr16_-_56037836_56037920	0.175392	FOXD3.p2	BC106131|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK148219|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	BC023147|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK087991|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK005047|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	NM_029092|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK135426|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK166781|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1
mm9_v1_chr2_-_9800211_9800245	0.175338	FOXD3.p2	AK156634|Gata3|14462|GATA binding protein 3	AK053728|Gata3|14462|GATA binding protein 3	AK090089|Gata3|14462|GATA binding protein 3	AK155549|Gata3|14462|GATA binding protein 3	NM_008091|Gata3|14462|GATA binding protein 3
mm9_v1_chr4_+_124377942_124377978	0.175299	FOXD3.p2	NM_010213|Fhl3|14201|four and a half LIM domains 3	AF114382|Fhl3|14201|four and a half LIM domains 3	BC144903|Fhl3|14201|four and a half LIM domains 3	BC145939|Fhl3|14201|four and a half LIM domains 3
mm9_v1_chr11_+_98724908_98724950	0.175284	FOXD3.p2	NM_197940|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr4_-_6381414_6381433	0.175226	FOXD3.p2	AK164305|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AK172560|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	NM_010945|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor
mm9_v1_chr12_+_75065510_75065528	0.175214	FOXD3.p2	AK152833|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1	AK138261|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1	NM_178392|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1
mm9_v1_chr3_-_117571853_117571885	0.175072	FOXD3.p2	AK038971|Snx7|76561|sorting nexin 7	NM_001190156|Snx7|76561|sorting nexin 7	NM_029655|Snx7|76561|sorting nexin 7
mm9_v1_chr10_-_61441842_61441910	0.174601	FOXD3.p2	NM_007731|Col13a1|12817|collagen, type XIII, alpha 1	U30292|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr1_-_54495779_54495827	0.174465	FOXD3.p2	AK160997|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	BC141157|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	AK145040|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	AK165830|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	NM_001033194|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3
mm9_v1_chr9_-_79566271_79566499	0.174093	FOXD3.p2	U25652|Col12a1|12816|collagen, type XII, alpha 1	NM_007730|Col12a1|12816|collagen, type XII, alpha 1
mm9_v1_chr1_+_59543450_59543567	0.173982	FOXD3.p2	
mm9_v1_chr18_-_35821788_35821845	0.173606	FOXD3.p2	BC060950|Spata24|71242|spermatogenesis associated 24	AK017218|Spata24|71242|spermatogenesis associated 24	AK016341|Spata24|71242|spermatogenesis associated 24	AK012241|Spata24|71242|spermatogenesis associated 24	AY730532|Spata24|71242|spermatogenesis associated 24	NM_027733|Spata24|71242|spermatogenesis associated 24	NM_029485|Spata24|71242|spermatogenesis associated 24
mm9_v1_chr6_-_4036892_4036992	0.172272	FOXD3.p2	AF007552|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)	AK078796|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)	BC005572|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)	NM_009748|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)	AK053940|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)
mm9_v1_chr15_-_99481964_99482097	0.171369	FOXD3.p2	AK162660|Racgap1|26934|Rac GTPase-activating protein 1	AK168679|Racgap1|26934|Rac GTPase-activating protein 1	AF079974|Racgap1|26934|Rac GTPase-activating protein 1	BC010715|Racgap1|26934|Rac GTPase-activating protein 1	AK144745|Racgap1|26934|Rac GTPase-activating protein 1	AK165897|Racgap1|26934|Rac GTPase-activating protein 1	AK166084|Racgap1|26934|Rac GTPase-activating protein 1	AK166094|Racgap1|26934|Rac GTPase-activating protein 1	AK168020|Racgap1|26934|Rac GTPase-activating protein 1	AK168025|Racgap1|26934|Rac GTPase-activating protein 1	AK168170|Racgap1|26934|Rac GTPase-activating protein 1	AK053850|Racgap1|26934|Rac GTPase-activating protein 1	AF212320|Racgap1|26934|Rac GTPase-activating protein 1	AF212321|Racgap1|26934|Rac GTPase-activating protein 1	NM_012025|Racgap1|26934|Rac GTPase-activating protein 1	AK144608|Racgap1|26934|Rac GTPase-activating protein 1	AB030252|Racgap1|26934|Rac GTPase-activating protein 1	AK154929|Racgap1|26934|Rac GTPase-activating protein 1
mm9_v1_chr12_+_17273358_17273435	0.170991	FOXD3.p2	AK167386|Pdia6|71853|protein disulfide isomerase associated 6	AK152960|Pdia6|71853|protein disulfide isomerase associated 6	AK005989|Pdia6|71853|protein disulfide isomerase associated 6	AK133792|Pdia6|71853|protein disulfide isomerase associated 6	AK166111|Pdia6|71853|protein disulfide isomerase associated 6	AK168136|Pdia6|71853|protein disulfide isomerase associated 6	AK168279|Pdia6|71853|protein disulfide isomerase associated 6	AK076558|Pdia6|71853|protein disulfide isomerase associated 6	NM_027959|Pdia6|71853|protein disulfide isomerase associated 6	BC006865|Pdia6|71853|protein disulfide isomerase associated 6	AK151008|Pdia6|71853|protein disulfide isomerase associated 6	AK165877|Pdia6|71853|protein disulfide isomerase associated 6
mm9_v1_chr7_-_31107320_31107393	0.17083	FOXD3.p2	AK155437|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1	AK002462|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1	BC147173|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1	BC147174|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1	NM_001033140|Sdhaf1|68332|succinate dehydrogenase complex assembly factor 1
mm9_v1_chr1_-_184447549_184447745	0.170452	FOXD3.p2	AF015038|Capn2|12334|calpain 2	AK150695|Capn2|12334|calpain 2	AK152094|Capn2|12334|calpain 2	AK152790|Capn2|12334|calpain 2	AK152994|Capn2|12334|calpain 2	AK052141|Capn2|12334|calpain 2	BC054726|Capn2|12334|calpain 2	NM_009794|Capn2|12334|calpain 2	AK154855|Capn2|12334|calpain 2	D38117|Capn2|12334|calpain 2	AK053832|Capn2|12334|calpain 2
mm9_v1_chr8_+_34807688_34807718	0.170307	FOXD3.p2	AK027984|Gsr|14782|glutathione reductase
mm9_v1_chr7_-_31827099_31827340	0.170197	FOXD3.p2	BC031112|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	BC013340|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	AK169966|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	AK003068|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	AK170810|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	U72680|Fxyd5|18301|FXYD domain-containing ion transport regulator 5	NM_008761|Fxyd5|18301|FXYD domain-containing ion transport regulator 5
mm9_v1_chr4_-_4720451_4720507	0.168823	FOXD3.p2	BC048776|Impad1|242291|inositol monophosphatase domain containing 1	NM_177730|Impad1|242291|inositol monophosphatase domain containing 1	AK045511|Impad1|242291|inositol monophosphatase domain containing 1
mm9_v1_chr3_-_96067233_96067257	0.168665	FOXD3.p2	BC057955|Hist2h4|97122|histone cluster 2, H4	BC051566|Hist2h4|97122|histone cluster 2, H4	NM_033596|Hist2h4|97122|histone cluster 2, H4
mm9_v1_chr4_-_132895019_132895110	0.16859	FOXD3.p2	BC048824|Wdtc1|230796|WD and tetratricopeptide repeats 1
mm9_v1_chr4_-_58925575_58925638	0.168555	FOXD3.p2	AK087690|AI314180|230249|expressed sequence AI314180	BC058684|AI314180|230249|expressed sequence AI314180	NM_172381|AI314180|230249|expressed sequence AI314180	AK041579|AI314180|230249|expressed sequence AI314180
mm9_v1_chr5_+_17468366_17468438	0.168084	FOXD3.p2	BC147449|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	BC147466|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	AK040065|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	NM_001081143|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	BC147839|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	BC147841|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3
mm9_v1_chrX_+_155897136_155897153	0.168015	FOXD3.p2	AK005554|Mtap7d2|78283|MAP7 domain containing 2	AK030316|Mtap7d2|78283|MAP7 domain containing 2
mm9_v1_chr4_-_124370770_124370859	0.167017	FOXD3.p2	BC043139|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK012550|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	NM_026031|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK147113|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	BC061074|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK145266|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr6_+_28373521_28373688	0.166845	FOXD3.p2	BC132452|Arf5|11844|ADP-ribosylation factor 5	BC138756|Arf5|11844|ADP-ribosylation factor 5	D87902|Arf5|11844|ADP-ribosylation factor 5	NM_007480|Arf5|11844|ADP-ribosylation factor 5
mm9_v1_chr9_-_44611055_44611072	0.166743	FOXD3.p2	AK149384|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr6_-_48658182_48658205	0.166743	FOXD3.p2	AK050328|Gimap6|231931|GTPase, IMAP family member 6	AK160244|Gimap6|231931|GTPase, IMAP family member 6	BC028779|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr6_+_29325052_29325077	0.16638	FOXD3.p2	AF177023|Calu|12321|calumenin
mm9_v1_chr13_-_60278447_60278547	0.166077	FOXD3.p2	BC055747|Gas1|14451|growth arrest specific 1
mm9_v1_chr12_+_111724001_111724119	0.165897	FOXD3.p2	AB055635|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AB055636|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	U37353|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr4_+_115511802_115511871	0.16571	FOXD3.p2	AK141298|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	AK010697|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	AK169982|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	Y11091|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	AK155934|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	NM_021461|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	BC021369|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1
mm9_v1_chr9_-_64188945_64189063	0.165428	FOXD3.p2	AK035357|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK032451|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	BC056939|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK173310|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK150851|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK151780|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK153433|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	NM_001001295|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like
mm9_v1_chr11_+_68859125_68859285	0.165413	FOXD3.p2	NM_011496|Aurkb|20877|aurora kinase B	AK132006|Aurkb|20877|aurora kinase B	BC003261|Aurkb|20877|aurora kinase B	AK075951|Aurkb|20877|aurora kinase B	U69107|Aurkb|20877|aurora kinase B	AK191945|Aurkb|20877|aurora kinase B
mm9_v1_chr18_-_89063689_89063737	0.165314	FOXD3.p2	AK142069|Socs6|54607|suppressor of cytokine signaling 6	AK053803|Socs6|54607|suppressor of cytokine signaling 6	AK156591|Socs6|54607|suppressor of cytokine signaling 6
mm9_v1_chr5_-_140302780_140302843	0.165115	FOXD3.p2	AK012616|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3	BC058692|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3	BC027410|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3	NM_025604|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3	AK019558|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3
mm9_v1_chr2_+_157104738_157104878	0.165022	FOXD3.p2	AK018761|Rpn2|20014|ribophorin II	BC046806|Rpn2|20014|ribophorin II	AK004968|Rpn2|20014|ribophorin II	NM_019642|Rpn2|20014|ribophorin II
mm9_v1_chr17_+_35196041_35196046	0.164722	FOXD3.p2	AF004106|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2
mm9_v1_chr15_-_103045710_103045798	0.164374	FOXD3.p2	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr7_-_129245303_129245368	0.164303	FOXD3.p2	AK167447|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK089103|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC092379|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC060951|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018717|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK008788|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK009698|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK010307|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK011302|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018688|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK151719|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK152995|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	NM_028177|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm9_v1_chr19_+_6984613_6984666	0.163676	FOXD3.p2	AK002791|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	AK003292|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	BC019418|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)
mm9_v1_chr11_-_101327431_101327547	0.163273	FOXD3.p2	BC085504|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159310|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC025496|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK170371|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC099678|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154965|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154178|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159315|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK160891|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK034795|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK155342|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	NM_012037|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK145193|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)
mm9_v1_chr3_-_105762117_105762217	0.162682	FOXD3.p2	AK169634|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	BC089574|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK162311|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK149176|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK167626|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168590|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK151574|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK081249|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK002960|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	BC049640|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK011312|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168028|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168041|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK019459|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK037892|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK152253|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK152829|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK167480|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK169137|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK150730|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK151250|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK158569|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK157544|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chrX_+_155970637_155970677	0.162036	FOXD3.p2	BC075674|A830080D01Rik|382252|RIKEN cDNA A830080D01 gene	AK145159|A830080D01Rik|382252|RIKEN cDNA A830080D01 gene
mm9_v1_chr8_-_72498210_72498309	0.161884	FOXD3.p2	NM_001113346|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr1_+_88024759_88024856	0.161881	FOXD3.p2	BC002203|Psmd1|70247|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
mm9_v1_chr11_-_69648350_69648356	0.161623	FOXD3.p2	AK173159|Nlgn2|216856|neuroligin 2	NM_198862|Nlgn2|216856|neuroligin 2
mm9_v1_chr18_+_61265225_61265605	0.161237	FOXD3.p2	AK146069|Csf1r|12978|colony stimulating factor 1 receptor	NM_001037859|Csf1r|12978|colony stimulating factor 1 receptor	BC066863|Csf1r|12978|colony stimulating factor 1 receptor	BC050024|Csf1r|12978|colony stimulating factor 1 receptor	AK171241|Csf1r|12978|colony stimulating factor 1 receptor	AK156550|Csf1r|12978|colony stimulating factor 1 receptor	AK155565|Csf1r|12978|colony stimulating factor 1 receptor	AK155488|Csf1r|12978|colony stimulating factor 1 receptor	AK079247|Csf1r|12978|colony stimulating factor 1 receptor	AK155576|Csf1r|12978|colony stimulating factor 1 receptor	AK155858|Csf1r|12978|colony stimulating factor 1 receptor	AK154128|Csf1r|12978|colony stimulating factor 1 receptor	AK155640|Csf1r|12978|colony stimulating factor 1 receptor	AK155654|Csf1r|12978|colony stimulating factor 1 receptor	AK171386|Csf1r|12978|colony stimulating factor 1 receptor	AK004947|Csf1r|12978|colony stimulating factor 1 receptor	AK154556|Csf1r|12978|colony stimulating factor 1 receptor	AK154653|Csf1r|12978|colony stimulating factor 1 receptor	AK154699|Csf1r|12978|colony stimulating factor 1 receptor	AK076215|Csf1r|12978|colony stimulating factor 1 receptor	AK143545|Csf1r|12978|colony stimulating factor 1 receptor	X06368|Csf1r|12978|colony stimulating factor 1 receptor	X68932|Csf1r|12978|colony stimulating factor 1 receptor	AK080326|Csf1r|12978|colony stimulating factor 1 receptor	BC043054|Csf1r|12978|colony stimulating factor 1 receptor	AK089498|Csf1r|12978|colony stimulating factor 1 receptor	AK171543|Csf1r|12978|colony stimulating factor 1 receptor	BC036343|Csf1r|12978|colony stimulating factor 1 receptor	AK041299|Csf1r|12978|colony stimulating factor 1 receptor
mm9_v1_chr4_-_115612507_115612530	0.160869	FOXD3.p2	BC050912|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AB037698|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AF448118|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AK141654|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_001025567|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_130865|Dmbx1|140477|diencephalon/mesencephalon homeobox 1
mm9_v1_chr13_+_76718869_76718988	0.160693	FOXD3.p2	AK154322|Mctp1|78771|multiple C2 domains, transmembrane 1	AK144765|Mctp1|78771|multiple C2 domains, transmembrane 1
mm9_v1_chr6_+_57530968_57531087	0.160462	FOXD3.p2	NM_025992|Herc6|67138|hect domain and RLD 6	AK149648|Herc6|67138|hect domain and RLD 6	AK147960|Herc6|67138|hect domain and RLD 6	AK011047|Herc6|67138|hect domain and RLD 6
mm9_v1_chr2_+_152512797_152512937	0.160275	FOXD3.p2	AK010255|Mcts2|66405|malignant T cell amplified sequence 2	NM_025543|Mcts2|66405|malignant T cell amplified sequence 2	BC027507|Mcts2|66405|malignant T cell amplified sequence 2	AK002563|Mcts2|66405|malignant T cell amplified sequence 2	AK028001|Mcts2|66405|malignant T cell amplified sequence 2
mm9_v1_chr13_+_3477477_3477548	0.159764	FOXD3.p2	AK084238|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK013191|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK034854|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK087718|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK043092|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK031301|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK043278|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene
mm9_v1_chr11_-_6333725_6333827	0.159639	FOXD3.p2	AK178770|H2afv|77605|H2A histone family, member V
mm9_v1_chr5_-_135727086_135727099	0.159245	FOXD3.p2	AK021164|Fzd9|14371|frizzled homolog 9 (Drosophila)
mm9_v1_chr4_-_120597563_120597650	0.159233	FOXD3.p2	BC023360|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	AK014134|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	NM_001160043|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	NM_028457|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)
mm9_v1_chr18_-_32297813_32297870	0.159142	FOXD3.p2	AF318182|Proc|19123|protein C	BC013896|Proc|19123|protein C	NM_001042768|Proc|19123|protein C	NM_008934|Proc|19123|protein C
mm9_v1_chr4_-_99495806_99495876	0.159139	FOXD3.p2	AK045037|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK166362|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	NM_026348|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK179730|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	BC049557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK013373|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK015557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK153726|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK088352|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK165072|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK005779|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)
mm9_v1_chr11_-_106860803_106860838	0.158917	FOXD3.p2	NM_010655|Kpna2|16647|karyopherin (importin) alpha 2
mm9_v1_chr7_+_29501805_29501891	0.158903	FOXD3.p2	NM_015796|Fbxo17|50760|F-box protein 17	BC026470|Fbxo17|50760|F-box protein 17	AK133408|Fbxo17|50760|F-box protein 17	AK134284|Fbxo17|50760|F-box protein 17	AF176532|Fbxo17|50760|F-box protein 17
mm9_v1_chr19_-_41970627_41970698	0.158823	FOXD3.p2	BC062977|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)	NM_199447|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)	AK146550|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)	BC056232|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)
mm9_v1_chr9_-_90009416_90009657	0.1588	FOXD3.p2	AK167079|Morf4l1|21761|mortality factor 4 like 1	AK164251|Morf4l1|21761|mortality factor 4 like 1	AK010528|Morf4l1|21761|mortality factor 4 like 1	AK011441|Morf4l1|21761|mortality factor 4 like 1	AK182816|Morf4l1|21761|mortality factor 4 like 1	AK218718|Morf4l1|21761|mortality factor 4 like 1	BC083094|Morf4l1|21761|mortality factor 4 like 1	AK152119|Morf4l1|21761|mortality factor 4 like 1	AK168585|Morf4l1|21761|mortality factor 4 like 1	AK168608|Morf4l1|21761|mortality factor 4 like 1	AK150925|Morf4l1|21761|mortality factor 4 like 1	AK220441|Morf4l1|21761|mortality factor 4 like 1	AK146210|Morf4l1|21761|mortality factor 4 like 1	AK168327|Morf4l1|21761|mortality factor 4 like 1	AK169065|Morf4l1|21761|mortality factor 4 like 1	AK168674|Morf4l1|21761|mortality factor 4 like 1	AB042241|Morf4l1|21761|mortality factor 4 like 1	AF319620|Morf4l1|21761|mortality factor 4 like 1	AF319621|Morf4l1|21761|mortality factor 4 like 1	BC085103|Morf4l1|21761|mortality factor 4 like 1	BC003894|Morf4l1|21761|mortality factor 4 like 1	BC017619|Morf4l1|21761|mortality factor 4 like 1	BC083118|Morf4l1|21761|mortality factor 4 like 1	BC092293|Morf4l1|21761|mortality factor 4 like 1	BC103783|Morf4l1|21761|mortality factor 4 like 1	AK011249|Morf4l1|21761|mortality factor 4 like 1	AK016414|Morf4l1|21761|mortality factor 4 like 1	NM_001039147|Morf4l1|21761|mortality factor 4 like 1	NM_024431|Morf4l1|21761|mortality factor 4 like 1
mm9_v1_chr1_-_184246785_184246786	0.158415	FOXD3.p2	AK028774|Fbxo28|67948|F-box protein 28
mm9_v1_chr10_-_88289526_88289560	0.158271	FOXD3.p2	AK145554|Utp20|70683|UTP20, small subunit (SSU) processome component, homolog (yeast)	BC084586|Utp20|70683|UTP20, small subunit (SSU) processome component, homolog (yeast)	NM_175158|Utp20|70683|UTP20, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr8_+_72696276_72696336	0.158085	FOXD3.p2	AK032711|Tmem161a|234371|transmembrane protein 161A	AK082916|Tmem161a|234371|transmembrane protein 161A	AK049979|Tmem161a|234371|transmembrane protein 161A	NM_145597|Tmem161a|234371|transmembrane protein 161A	AK082758|Tmem161a|234371|transmembrane protein 161A	AK147962|Tmem161a|234371|transmembrane protein 161A	AK088569|Tmem161a|234371|transmembrane protein 161A	AK167517|Tmem161a|234371|transmembrane protein 161A	BC021367|Tmem161a|234371|transmembrane protein 161A
mm9_v1_chr1_-_163181313_163181346	0.158033	FOXD3.p2	AK157820|Prdx6|11758|peroxiredoxin 6	Y12883|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr18_-_46733959_46734186	0.157842	FOXD3.p2	AK080873|Ticam2|225471|toll-like receptor adaptor molecule 2	AK054192|Ticam2|225471|toll-like receptor adaptor molecule 2	AK151885|Ticam2|225471|toll-like receptor adaptor molecule 2	AY275837|Ticam2|225471|toll-like receptor adaptor molecule 2	BC099933|Ticam2|225471|toll-like receptor adaptor molecule 2	AK134103|Ticam2|225471|toll-like receptor adaptor molecule 2	NM_173394|Ticam2|225471|toll-like receptor adaptor molecule 2
mm9_v1_chr7_+_19589395_19589469	0.157685	FOXD3.p2	AK087457|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK031834|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	BC036162|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	NM_178757|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK032010|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1
mm9_v1_chr1_+_45402907_45402949	0.157529	FOXD3.p2	AK029451|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr16_+_20674298_20674336	0.157391	FOXD3.p2	BC021441|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr4_+_130219280_130219280	0.157351	FOXD3.p2	AK052145|Pum1|80912|pumilio 1 (Drosophila)	AK161135|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chrX_-_45866446_45866665	0.157265	FOXD3.p2	AK211196|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AF100927|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AK133764|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	BC003292|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	DQ016499|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	NM_012019|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1
mm9_v1_chr2_-_51828440_51828551	0.157256	FOXD3.p2	BC002019|Nmi|64685|N-myc (and STAT) interactor	AK146577|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr17_-_43013469_43013643	0.157123	FOXD3.p2	AK046750|Cd2ap|12488|CD2-associated protein
mm9_v1_chr17_+_71965554_71965636	0.156874	FOXD3.p2	NM_175639|Wdr43|72515|WD repeat domain 43	AK012043|Wdr43|72515|WD repeat domain 43	AK152321|Wdr43|72515|WD repeat domain 43	AK032907|Wdr43|72515|WD repeat domain 43	AK080660|Wdr43|72515|WD repeat domain 43	AK129031|Wdr43|72515|WD repeat domain 43
mm9_v1_chr5_+_123592177_123592311	0.156873	FOXD3.p2	AK141316|Setd1b|208043|SET domain containing 1B
mm9_v1_chr11_-_54601133_54601161	0.156808	FOXD3.p2	BC034079|Cdc42se2|72729|CDC42 small effector 2	AK088090|Cdc42se2|72729|CDC42 small effector 2	AK090381|Cdc42se2|72729|CDC42 small effector 2	AK012983|Cdc42se2|72729|CDC42 small effector 2	AK039301|Cdc42se2|72729|CDC42 small effector 2	AK135775|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr1_-_55084321_55084327	0.156526	FOXD3.p2	NM_031179|Sf3b1|81898|splicing factor 3b, subunit 1	AB037890|Sf3b1|81898|splicing factor 3b, subunit 1	AK165992|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr13_-_21875234_21875270	0.156483	FOXD3.p2	BC107287|Hist1h3i|319153|histone cluster 1, H3i	BC127148|Hist1h3i|319153|histone cluster 1, H3i	BC116383|Hist1h3i|319153|histone cluster 1, H3i	AK155722|Hist1h3i|319153|histone cluster 1, H3i	NM_178207|Hist1h3i|319153|histone cluster 1, H3i
mm9_v1_chr16_+_32914183_32914232	0.15638	FOXD3.p2	AK155550|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	NM_001081255|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK076529|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC151058|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC157924|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC172144|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK133482|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3
mm9_v1_chr19_+_22767298_22767313	0.156187	FOXD3.p2	AK052064|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK084402|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK044533|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK051934|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr17_-_65929913_65929945	0.156085	FOXD3.p2	
mm9_v1_chr10_+_81022283_81022301	0.155992	FOXD3.p2	X73361|Aes|14797|amino-terminal enhancer of split	BC132217|Aes|14797|amino-terminal enhancer of split	BC132219|Aes|14797|amino-terminal enhancer of split	BC145299|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr14_-_70107206_70107408	0.155952	FOXD3.p2	BC052536|R3hcc1|71843|R3H domain and coiled-coil containing 1	BC059860|R3hcc1|71843|R3H domain and coiled-coil containing 1	AK032854|R3hcc1|71843|R3H domain and coiled-coil containing 1	AK156843|R3hcc1|71843|R3H domain and coiled-coil containing 1	NM_001146012|R3hcc1|71843|R3H domain and coiled-coil containing 1
mm9_v1_chr2_-_7317824_7317824	0.155734	FOXD3.p2	AK160861|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110231|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr10_+_87663839_87663973	0.15568	FOXD3.p2	AK013835|Ccdc53|67282|coiled-coil domain containing 53	AK158822|Ccdc53|67282|coiled-coil domain containing 53	NM_001122960|Ccdc53|67282|coiled-coil domain containing 53	NM_026070|Ccdc53|67282|coiled-coil domain containing 53	NM_027487|Ccdc53|67282|coiled-coil domain containing 53	AK017732|Ccdc53|67282|coiled-coil domain containing 53	AK004206|Ccdc53|67282|coiled-coil domain containing 53	AK028599|Ccdc53|67282|coiled-coil domain containing 53	AK009358|Ccdc53|67282|coiled-coil domain containing 53	BC029256|Ccdc53|67282|coiled-coil domain containing 53
mm9_v1_chr11_+_22890575_22890628	0.155484	FOXD3.p2	NM_009837|Cct4|12464|chaperonin containing Tcp1, subunit 4 (delta)	Z31554|Cct4|12464|chaperonin containing Tcp1, subunit 4 (delta)	AK146242|Cct4|12464|chaperonin containing Tcp1, subunit 4 (delta)	AK010634|Cct4|12464|chaperonin containing Tcp1, subunit 4 (delta)	AK152665|Cct4|12464|chaperonin containing Tcp1, subunit 4 (delta)	AK165229|Cct4|12464|chaperonin containing Tcp1, subunit 4 (delta)	AK167026|Cct4|12464|chaperonin containing Tcp1, subunit 4 (delta)
mm9_v1_chr19_-_60937266_60937332	0.155028	FOXD3.p2	AF325263|Sfxn4|94281|sideroflexin 4	BC089535|Sfxn4|94281|sideroflexin 4	AK148530|Sfxn4|94281|sideroflexin 4	BC058211|Sfxn4|94281|sideroflexin 4	NM_053198|Sfxn4|94281|sideroflexin 4
mm9_v1_chr8_+_87162885_87162891	0.154805	FOXD3.p2	AK132071|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm9_v1_chr2_+_109857966_109858261	0.154663	FOXD3.p2	AK147056|Ccdc34|68201|coiled-coil domain containing 34	NM_026613|Ccdc34|68201|coiled-coil domain containing 34	BC108339|Ccdc34|68201|coiled-coil domain containing 34	AK019172|Ccdc34|68201|coiled-coil domain containing 34	AK033555|Ccdc34|68201|coiled-coil domain containing 34	AK019247|Ccdc34|68201|coiled-coil domain containing 34	AK012383|Ccdc34|68201|coiled-coil domain containing 34	BC062248|Ccdc34|68201|coiled-coil domain containing 34	AK014021|Ccdc34|68201|coiled-coil domain containing 34	BC089458|Ccdc34|68201|coiled-coil domain containing 34	BC049229|Ccdc34|68201|coiled-coil domain containing 34
mm9_v1_chr4_-_126738303_126738384	0.154547	FOXD3.p2	BC064774|Zmym1|68310|zinc finger, MYM domain containing 1	AK138687|Zmym1|68310|zinc finger, MYM domain containing 1	AK166769|Zmym1|68310|zinc finger, MYM domain containing 1	AK049568|Zmym1|68310|zinc finger, MYM domain containing 1	AK035618|Zmym1|68310|zinc finger, MYM domain containing 1	NM_026670|Zmym1|68310|zinc finger, MYM domain containing 1	AK167508|Zmym1|68310|zinc finger, MYM domain containing 1	AK016783|Zmym1|68310|zinc finger, MYM domain containing 1	AK044538|Zmym1|68310|zinc finger, MYM domain containing 1
mm9_v1_chr3_+_107081927_107081986	0.154434	FOXD3.p2	AK003358|Hbxip|68576|hepatitis B virus x interacting protein	BC028547|Hbxip|68576|hepatitis B virus x interacting protein
mm9_v1_chr9_-_103125934_103125973	0.154402	FOXD3.p2	BC018573|Trf|22041|transferrin
mm9_v1_chr2_+_78710638_78710757	0.154361	FOXD3.p2	AF003346|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr3_-_94846454_94846515	0.154105	FOXD3.p2	AB029146|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC009005|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029144|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AK010969|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029142|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029143|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029145|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AF013099|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AF175574|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	NM_008951|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC016433|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AK145524|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
mm9_v1_chr2_-_79969429_79969614	0.153813	FOXD3.p2	AK050004|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001159582|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AK021279|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr8_-_87784612_87784676	0.153452	FOXD3.p2	AK219106|Vps35|65114|vacuolar protein sorting 35
mm9_v1_chr6_+_142705178_142705443	0.153088	FOXD3.p2	NM_009908|Cmas|12764|cytidine monophospho-N-acetylneuraminic acid synthetase	AK155730|Cmas|12764|cytidine monophospho-N-acetylneuraminic acid synthetase	BC031500|Cmas|12764|cytidine monophospho-N-acetylneuraminic acid synthetase	BC063776|Cmas|12764|cytidine monophospho-N-acetylneuraminic acid synthetase	AJ006215|Cmas|12764|cytidine monophospho-N-acetylneuraminic acid synthetase
mm9_v1_chr2_+_119444452_119444483	0.153083	FOXD3.p2	AF305710|Nusap1|108907|nucleolar and spindle associated protein 1	AK042697|Nusap1|108907|nucleolar and spindle associated protein 1	AK044819|Nusap1|108907|nucleolar and spindle associated protein 1	AK076028|Nusap1|108907|nucleolar and spindle associated protein 1	AK088389|Nusap1|108907|nucleolar and spindle associated protein 1	AK038174|Nusap1|108907|nucleolar and spindle associated protein 1	BC004787|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr2_-_60589059_60589160	0.153082	FOXD3.p2	AK011205|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr2_-_127033968_127034003	0.152701	FOXD3.p2	BC117065|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene	BC119086|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene	AK019023|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene	AK029416|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene
mm9_v1_chr1_+_69873535_69873574	0.152637	FOXD3.p2	AK015884|Spag16|66722|sperm associated antigen 16	BC120668|Spag16|66722|sperm associated antigen 16	BC145006|Spag16|66722|sperm associated antigen 16	AF490391|Spag16|66722|sperm associated antigen 16	NM_029160|Spag16|66722|sperm associated antigen 16	AK083083|Spag16|66722|sperm associated antigen 16
mm9_v1_chr4_+_147965596_147965685	0.152476	FOXD3.p2	AK028359|Srm|20810|spermidine synthase	NM_009272|Srm|20810|spermidine synthase	AK051101|Srm|20810|spermidine synthase	BC005566|Srm|20810|spermidine synthase	L19311|Srm|20810|spermidine synthase	AK146395|Srm|20810|spermidine synthase
mm9_v1_chr10_-_7500674_7500717	0.152455	FOXD3.p2	AK144481|BC013529|215751|cDNA sequence BC013529	BC013529|BC013529|215751|cDNA sequence BC013529	NM_145418|BC013529|215751|cDNA sequence BC013529
mm9_v1_chr10_-_128258639_128258702	0.152293	FOXD3.p2	AK002824|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK002583|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK013455|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	BC002146|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	NM_024180|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)
mm9_v1_chr19_+_12535536_12535672	0.152216	FOXD3.p2	L20315|Mpeg1|17476|macrophage expressed gene 1	BC129843|Mpeg1|17476|macrophage expressed gene 1	BC129844|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr5_-_115569276_115569358	0.15214	FOXD3.p2	L11163|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	AK169428|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	BC055063|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	BC016259|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	NM_007383|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	AK155361|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain
mm9_v1_chr1_+_129702056_129702170	0.151744	FOXD3.p2	AK033697|Ccnt2|72949|cyclin T2
mm9_v1_chr5_-_100929644_100929677	0.151496	FOXD3.p2	AK220225|Lin54|231506|lin-54 homolog (C. elegans)	AK134320|Lin54|231506|lin-54 homolog (C. elegans)	AK029288|Lin54|231506|lin-54 homolog (C. elegans)	NM_172714|Lin54|231506|lin-54 homolog (C. elegans)
mm9_v1_chrX_+_135744582_135744582	0.151383	FOXD3.p2	NM_001164630|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_175541|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr9_-_44728786_44728789	0.151299	FOXD3.p2	AK008012|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008030|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008183|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008251|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK009465|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK009468|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK009471|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK009806|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019192|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019252|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019274|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019350|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019355|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
mm9_v1_chr6_+_4490515_4490528	0.15076	FOXD3.p2	AK003150|Col1a2|12843|collagen, type I, alpha 2	BC023203|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr12_-_4914313_4914463	0.150713	FOXD3.p2	AK031821|Ubxn2a|217379|UBX domain protein 2A	NM_145441|Ubxn2a|217379|UBX domain protein 2A	AK134666|Ubxn2a|217379|UBX domain protein 2A	AK041556|Ubxn2a|217379|UBX domain protein 2A	AK161940|Ubxn2a|217379|UBX domain protein 2A
mm9_v1_chr5_-_123438493_123438509	0.150375	FOXD3.p2	AK087953|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr6_-_71582871_71582939	0.150368	FOXD3.p2	BC032256|Kdm3a|104263|lysine (K)-specific demethylase 3A	AK129204|Kdm3a|104263|lysine (K)-specific demethylase 3A	NM_001038695|Kdm3a|104263|lysine (K)-specific demethylase 3A
mm9_v1_chr13_-_45648492_45648493	0.150305	FOXD3.p2	AK019314|2900016G23Rik|78659|RIKEN cDNA 2900016G23 gene
mm9_v1_chr3_+_82830071_82830096	0.15023	FOXD3.p2	NM_001111048|Fga|14161|fibrinogen alpha chain	NM_010196|Fga|14161|fibrinogen alpha chain	AK146828|Fga|14161|fibrinogen alpha chain	BC005467|Fga|14161|fibrinogen alpha chain	BC024778|Fga|14161|fibrinogen alpha chain
mm9_v1_chr4_+_125806078_125806220	0.150227	FOXD3.p2	AK050808|Stk40|74178|serine/threonine kinase 40
mm9_v1_chr5_-_5559500_5559542	0.150096	FOXD3.p2	NM_153116|Gtpbp10|207704|GTP-binding protein 10 (putative)	BC034507|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK139595|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK160252|Gtpbp10|207704|GTP-binding protein 10 (putative)
mm9_v1_chr10_-_80380806_80381016	0.149975	FOXD3.p2	AK180471|Lmnb2|16907|lamin B2	X54098|Lmnb2|16907|lamin B2	BC051985|Lmnb2|16907|lamin B2	BC042430|Lmnb2|16907|lamin B2	NM_010722|Lmnb2|16907|lamin B2
mm9_v1_chr12_+_66176588_66176613	0.14961	FOXD3.p2	AK039944|Fancm|104806|Fanconi anemia, complementation group M	AK084697|Fancm|104806|Fanconi anemia, complementation group M	AK086395|Fancm|104806|Fanconi anemia, complementation group M	AK050306|Fancm|104806|Fanconi anemia, complementation group M	NM_178912|Fancm|104806|Fanconi anemia, complementation group M	AK053715|Fancm|104806|Fanconi anemia, complementation group M	BC150785|Fancm|104806|Fanconi anemia, complementation group M	AK173211|Fancm|104806|Fanconi anemia, complementation group M
mm9_v1_chr4_-_14548903_14548926	0.14961	FOXD3.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr6_+_106719113_106719221	0.149507	FOXD3.p2	AK135791|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK010662|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AB063106|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK152739|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	BC031764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	NM_027296|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK011764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK166804|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK139764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1
mm9_v1_chr7_-_52409783_52409953	0.149489	FOXD3.p2	AK209303|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK220200|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK169346|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK030673|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK144967|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK151691|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	BC013548|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	NM_145954|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK144995|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK161198|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK170276|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK164374|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1
mm9_v1_chr7_-_152125661_152125812	0.149176	FOXD3.p2	AK170833|Ccnd1|12443|cyclin D1	BC060172|Ccnd1|12443|cyclin D1	BC044841|Ccnd1|12443|cyclin D1	AK149905|Ccnd1|12443|cyclin D1	S78355|Ccnd1|12443|cyclin D1	AK053348|Ccnd1|12443|cyclin D1	AK164997|Ccnd1|12443|cyclin D1	M64403|Ccnd1|12443|cyclin D1	AK017834|Ccnd1|12443|cyclin D1
mm9_v1_chrM_-_622_663	0.149137	FOXD3.p2	
mm9_v1_chr3_+_95392919_95392945	0.148798	FOXD3.p2	BC027194|Golph3l|229593|golgi phosphoprotein 3-like
mm9_v1_chr2_+_69735301_69735369	0.148744	FOXD3.p2	DQ924536|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_001081548|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_177783|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	AK037622|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3
mm9_v1_chr11_-_4494790_4494809	0.148583	FOXD3.p2	BC032166|Mtmr3|74302|myotubularin related protein 3	AK141138|Mtmr3|74302|myotubularin related protein 3	BC081544|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr8_+_71732923_71732973	0.148166	FOXD3.p2	NM_001013379|Zfp930|234358|zinc finger protein 930	AK040352|Zfp930|234358|zinc finger protein 930
mm9_v1_chr4_-_118993081_118993127	0.148069	FOXD3.p2	BC050116|Ppih|66101|peptidyl prolyl isomerase H	BC016565|Ppih|66101|peptidyl prolyl isomerase H	BC098490|Ppih|66101|peptidyl prolyl isomerase H	AK136330|Ppih|66101|peptidyl prolyl isomerase H	AK005202|Ppih|66101|peptidyl prolyl isomerase H	AK014665|Ppih|66101|peptidyl prolyl isomerase H	AK164299|Ppih|66101|peptidyl prolyl isomerase H	AK003179|Ppih|66101|peptidyl prolyl isomerase H	AK008394|Ppih|66101|peptidyl prolyl isomerase H	AK134995|Ppih|66101|peptidyl prolyl isomerase H	NM_001110129|Ppih|66101|peptidyl prolyl isomerase H	NM_001110130|Ppih|66101|peptidyl prolyl isomerase H	NM_028677|Ppih|66101|peptidyl prolyl isomerase H
mm9_v1_chr11_+_114530028_114530110	0.148026	FOXD3.p2	BC094258|Rpl38|67671|ribosomal protein L38	BC094644|Rpl38|67671|ribosomal protein L38	NM_001048058|Rpl38|67671|ribosomal protein L38	BC081447|Rpl38|67671|ribosomal protein L38
mm9_v1_chr3_+_53267715_53267853	0.148003	FOXD3.p2	AK087909|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK038404|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	NM_173382|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK012908|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK161440|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr19_-_53465036_53465068	0.148002	FOXD3.p2	AK168575|Smndc1|76479|survival motor neuron domain containing 1	BC058779|Smndc1|76479|survival motor neuron domain containing 1	AK010395|Smndc1|76479|survival motor neuron domain containing 1	AK078834|Smndc1|76479|survival motor neuron domain containing 1	AK090047|Smndc1|76479|survival motor neuron domain containing 1	NM_172429|Smndc1|76479|survival motor neuron domain containing 1
mm9_v1_chr11_+_43534658_43534687	0.147986	FOXD3.p2	AK086604|Pwwp2a|70802|PWWP domain containing 2A	AK039984|Pwwp2a|70802|PWWP domain containing 2A
mm9_v1_chr10_-_126719287_126719357	0.147457	FOXD3.p2	AK034474|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr12_+_45412878_45412942	0.147179	FOXD3.p2	AK033938|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr5_-_121641282_121641449	0.146808	FOXD3.p2	D84372|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC057398|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC028513|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK011468|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK147354|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC059278|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159501|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159587|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_001109992|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_011202|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11
mm9_v1_chr8_+_58773380_58773394	0.146288	FOXD3.p2	AK002472|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)	AK146038|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)	BC021157|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)	U44389|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)
mm9_v1_chr6_+_135015679_135015703	0.146174	FOXD3.p2	NM_181444|Gprc5a|232431|G protein-coupled receptor, family C, group 5, member A	BC039217|Gprc5a|232431|G protein-coupled receptor, family C, group 5, member A
mm9_v1_chr3_-_148617598_148617598	0.146017	FOXD3.p2	NM_001081298|Lphn2|99633|latrophilin 2
mm9_v1_chr9_+_3532302_3532353	0.145892	FOXD3.p2	NM_001033322|Gucy1a2|234889|guanylate cyclase 1, soluble, alpha 2
mm9_v1_chr3_-_95675399_95675461	0.14557	FOXD3.p2	AK008293|Mrps21|66292|mitochondrial ribosomal protein S21	AB049956|Mrps21|66292|mitochondrial ribosomal protein S21	AK002588|Mrps21|66292|mitochondrial ribosomal protein S21	AK007662|Mrps21|66292|mitochondrial ribosomal protein S21	AK009703|Mrps21|66292|mitochondrial ribosomal protein S21	AK008265|Mrps21|66292|mitochondrial ribosomal protein S21
mm9_v1_chr3_+_105762363_105762420	0.145407	FOXD3.p2	AK078856|Wdr77|70465|WD repeat domain 77	AK048488|Wdr77|70465|WD repeat domain 77	AK168752|Wdr77|70465|WD repeat domain 77	AK050391|Wdr77|70465|WD repeat domain 77	AK168006|Wdr77|70465|WD repeat domain 77	NM_027432|Wdr77|70465|WD repeat domain 77	AK169128|Wdr77|70465|WD repeat domain 77	AK163839|Wdr77|70465|WD repeat domain 77
mm9_v1_chr2_-_94104877_94104914	0.145218	FOXD3.p2	AK140370|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene	AK089118|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene
mm9_v1_chr6_+_34334201_34334334	0.145152	FOXD3.p2	AK075865|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	NM_172398|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	BC026843|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK087002|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK082777|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK019906|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK169490|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)
mm9_v1_chr6_+_64679118_64679139	0.144739	FOXD3.p2	AK082354|Atoh1|11921|atonal homolog 1 (Drosophila)	BC010820|Atoh1|11921|atonal homolog 1 (Drosophila)	NM_007500|Atoh1|11921|atonal homolog 1 (Drosophila)
mm9_v1_chr13_-_101603253_101603421	0.144378	FOXD3.p2	AF461761|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	BC033452|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	AK090176|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	AK088004|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	AK051183|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	NM_022885|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5
mm9_v1_chr3_-_95799859_95799946	0.143746	FOXD3.p2	AK170922|Plekho1|67220|pleckstrin homology domain containing, family O member 1	AK170025|Plekho1|67220|pleckstrin homology domain containing, family O member 1	AK012945|Plekho1|67220|pleckstrin homology domain containing, family O member 1
mm9_v1_chr17_+_9181197_9181252	0.143701	FOXD3.p2	NM_025851|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK161278|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK005830|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	BC050753|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK006307|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK015220|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	BC061078|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene
mm9_v1_chr6_+_38331516_38331524	0.143418	FOXD3.p2	AK035185|Ttc26|264134|tetratricopeptide repeat domain 26	BC066060|Ttc26|264134|tetratricopeptide repeat domain 26	NM_153600|Ttc26|264134|tetratricopeptide repeat domain 26	BC031513|Ttc26|264134|tetratricopeptide repeat domain 26	BC066087|Ttc26|264134|tetratricopeptide repeat domain 26
mm9_v1_chr10_+_115254308_115254566	0.14319	FOXD3.p2	AK087696|Tspan8|216350|tetraspanin 8	AK077301|Tspan8|216350|tetraspanin 8	BC027777|Tspan8|216350|tetraspanin 8	BC029808|Tspan8|216350|tetraspanin 8	NM_001168679|Tspan8|216350|tetraspanin 8	NM_001168680|Tspan8|216350|tetraspanin 8	NM_146010|Tspan8|216350|tetraspanin 8	BC029068|Tspan8|216350|tetraspanin 8	BC025461|Tspan8|216350|tetraspanin 8	BC034198|Tspan8|216350|tetraspanin 8
mm9_v1_chr3_+_67234003_67234103	0.143001	FOXD3.p2	NM_138591|Gfm1|28030|G elongation factor, mitochondrial 1	AK033214|Gfm1|28030|G elongation factor, mitochondrial 1	BC013093|Gfm1|28030|G elongation factor, mitochondrial 1	BC031772|Gfm1|28030|G elongation factor, mitochondrial 1	AF315511|Gfm1|28030|G elongation factor, mitochondrial 1
mm9_v1_chr12_+_112951467_112951555	0.142975	FOXD3.p2	AK002873|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene	BC071262|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene	NM_001163388|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene	NM_026511|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene	AK012648|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene	AK010493|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene	AK005403|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene	AK160910|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene	AK029408|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene	AK148446|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene
mm9_v1_chr11_+_85646309_85646316	0.142928	FOXD3.p2	AK149348|Tbx2|21385|T-box 2
mm9_v1_chr15_+_3230406_3230616	0.142837	FOXD3.p2	
mm9_v1_chr19_-_40261753_40261779	0.142439	FOXD3.p2	BC022151|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC023894|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AY227736|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC034831|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC016494|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AK050082|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	NM_145499|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70
mm9_v1_chr14_-_33015012_33015098	0.142215	FOXD3.p2	BC062963|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK013976|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC132019|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC132319|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC096669|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK146516|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC037022|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC069903|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AB021122|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	NM_016897|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)
mm9_v1_chr3_+_129581477_129581610	0.142033	FOXD3.p2	BC051117|Pla2g12a|66350|phospholipase A2, group XIIA	AK010011|Pla2g12a|66350|phospholipase A2, group XIIA	NM_023196|Pla2g12a|66350|phospholipase A2, group XIIA	AY007381|Pla2g12a|66350|phospholipase A2, group XIIA	AK010174|Pla2g12a|66350|phospholipase A2, group XIIA	BC026812|Pla2g12a|66350|phospholipase A2, group XIIA	AK003183|Pla2g12a|66350|phospholipase A2, group XIIA	AK012414|Pla2g12a|66350|phospholipase A2, group XIIA	AK163693|Pla2g12a|66350|phospholipase A2, group XIIA
mm9_v1_chr9_+_56919839_56919849	0.141804	FOXD3.p2	NM_001110351|Sin3a|20466|transcriptional regulator, SIN3A (yeast)
mm9_v1_chr6_+_100654716_100654748	0.141622	FOXD3.p2	BC049816|Gxylt2|232313|glucoside xylosyltransferase 2	NM_198612|Gxylt2|232313|glucoside xylosyltransferase 2	AK144790|Gxylt2|232313|glucoside xylosyltransferase 2
mm9_v1_chr2_-_156960826_156961007	0.141358	FOXD3.p2	AK128954|Samhd1|56045|SAM domain and HD domain, 1	AK149865|Samhd1|56045|SAM domain and HD domain, 1	AK151335|Samhd1|56045|SAM domain and HD domain, 1	AK153390|Samhd1|56045|SAM domain and HD domain, 1	AK054490|Samhd1|56045|SAM domain and HD domain, 1	AK170688|Samhd1|56045|SAM domain and HD domain, 1	AK171565|Samhd1|56045|SAM domain and HD domain, 1	BC067198|Samhd1|56045|SAM domain and HD domain, 1	U15635|Samhd1|56045|SAM domain and HD domain, 1	BC012721|Samhd1|56045|SAM domain and HD domain, 1	AK078936|Samhd1|56045|SAM domain and HD domain, 1	NM_001139520|Samhd1|56045|SAM domain and HD domain, 1	NM_018851|Samhd1|56045|SAM domain and HD domain, 1
mm9_v1_chr2_-_28438389_28438521	0.14096	FOXD3.p2	AK045419|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr7_-_123182257_123182257	0.140653	FOXD3.p2	AK048143|Sox6|20679|SRY-box containing gene 6	NM_001025559|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr6_+_142246944_142246973	0.140583	FOXD3.p2	NM_010491|Iapp|15874|islet amyloid polypeptide	BC027527|Iapp|15874|islet amyloid polypeptide
mm9_v1_chr14_+_122933560_122933681	0.140491	FOXD3.p2	AK148002|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	BC006915|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	BC049802|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	AK183916|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	AK212580|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide
mm9_v1_chr5_+_124990703_124991022	0.140172	FOXD3.p2	BC131977|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC138294|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC083140|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	NM_019770|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK089965|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AB025218|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK179651|Tmed2|56334|transmembrane emp24 domain trafficking protein 2
mm9_v1_chr4_+_108952859_108952895	0.140158	FOXD3.p2	NM_007943|Eps15|13858|epidermal growth factor receptor pathway substrate 15
mm9_v1_chr2_-_84490827_84490896	0.140084	FOXD3.p2	BC054544|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	BC043108|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK161790|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK164485|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK168453|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085448|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085449|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085450|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_007615|Ctnnd1|12388|catenin (cadherin associated protein), delta 1
mm9_v1_chr4_-_55545337_55545348	0.139629	FOXD3.p2	U70662|Klf4|16600|Kruppel-like factor 4 (gut)	AK144942|Klf4|16600|Kruppel-like factor 4 (gut)	AK155343|Klf4|16600|Kruppel-like factor 4 (gut)	NM_010637|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr5_+_145965427_145965536	0.139452	FOXD3.p2	NM_001167944|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	NM_016683|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK173086|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK019484|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	BC060248|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5
mm9_v1_chr13_+_49703402_49703439	0.13875	FOXD3.p2	AK028300|Ogn|18295|osteoglycin	AK160760|Ogn|18295|osteoglycin	AK053650|Ogn|18295|osteoglycin	NM_008760|Ogn|18295|osteoglycin
mm9_v1_chr5_+_108026714_108026792	0.138697	FOXD3.p2	AK034418|Rpap2|231571|RNA polymerase II associated protein 2	AK161901|Rpap2|231571|RNA polymerase II associated protein 2	NM_001163461|Rpap2|231571|RNA polymerase II associated protein 2	NM_144911|Rpap2|231571|RNA polymerase II associated protein 2	AK145830|Rpap2|231571|RNA polymerase II associated protein 2	BC021895|Rpap2|231571|RNA polymerase II associated protein 2	AK166574|Rpap2|231571|RNA polymerase II associated protein 2
mm9_v1_chr1_-_180264067_180264092	0.138504	FOXD3.p2	AK190289|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr14_+_48092244_48092299	0.138436	FOXD3.p2	BC049155|Fbxo34|78938|F-box protein 34	AK013711|Fbxo34|78938|F-box protein 34
mm9_v1_chr11_+_120459958_120460039	0.138112	FOXD3.p2	BC023039|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr1_+_60237433_60237478	0.137953	FOXD3.p2	NM_173444|Nbeal1|269198|neurobeachin like 1
mm9_v1_chr9_-_61918412_61918412	0.137725	FOXD3.p2	BC094587|Glce|93683|glucuronyl C5-epimerase	NM_033320|Glce|93683|glucuronyl C5-epimerase
mm9_v1_chr2_-_30823346_30823454	0.137711	FOXD3.p2	AK082936|Tor1a|30931|torsin family 1, member A (torsin A)	AK079728|Tor1a|30931|torsin family 1, member A (torsin A)	AJ298841|Tor1a|30931|torsin family 1, member A (torsin A)	AK038891|Tor1a|30931|torsin family 1, member A (torsin A)	AK160361|Tor1a|30931|torsin family 1, member A (torsin A)	BC017683|Tor1a|30931|torsin family 1, member A (torsin A)	NM_144884|Tor1a|30931|torsin family 1, member A (torsin A)
mm9_v1_chr16_-_30587549_30587690	0.137647	FOXD3.p2	AK146895|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK030940|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK145186|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK135345|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK078501|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	BC043724|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	NM_178069|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK132527|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)
mm9_v1_chr4_-_107791061_107791155	0.137522	FOXD3.p2	M91458|Scp2|20280|sterol carrier protein 2, liver	BC034613|Scp2|20280|sterol carrier protein 2, liver	AK004860|Scp2|20280|sterol carrier protein 2, liver	BC018384|Scp2|20280|sterol carrier protein 2, liver	NM_011327|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chr7_+_95426585_95426756	0.137255	FOXD3.p2	AK146858|Ctsc|13032|cathepsin C	NM_009982|Ctsc|13032|cathepsin C	AK150761|Ctsc|13032|cathepsin C	AK151711|Ctsc|13032|cathepsin C	AK153168|Ctsc|13032|cathepsin C	AK002454|Ctsc|13032|cathepsin C	AK049406|Ctsc|13032|cathepsin C	AK167882|Ctsc|13032|cathepsin C	U89269|Ctsc|13032|cathepsin C	U74683|Ctsc|13032|cathepsin C	AK151388|Ctsc|13032|cathepsin C	AK152524|Ctsc|13032|cathepsin C	BC067063|Ctsc|13032|cathepsin C	AK151861|Ctsc|13032|cathepsin C
mm9_v1_chr11_-_78510874_78510941	0.137132	FOXD3.p2	BC058652|Nlk|18099|nemo like kinase	NM_008702|Nlk|18099|nemo like kinase
mm9_v1_chr18_+_37854011_37854154	0.136705	FOXD3.p2	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr6_-_49214015_49214054	0.136414	FOXD3.p2	AK170599|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076230|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK089980|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK171708|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK005187|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	NM_198102|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK148552|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr16_+_20672854_20672888	0.136246	FOXD3.p2	AK053144|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK142399|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK133903|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK139371|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK162698|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066038|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr9_-_113563906_113564041	0.136008	FOXD3.p2	AK199870|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr5_-_92738981_92739016	0.135548	FOXD3.p2	BC042708|Sdad1|231452|SDA1 domain containing 1	AK164608|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr10_+_75495391_75495470	0.135512	FOXD3.p2	AK144644|Zfp280b|64453|zinc finger protein 280B	AK144736|Zfp280b|64453|zinc finger protein 280B	BC094574|Zfp280b|64453|zinc finger protein 280B	AK031331|Zfp280b|64453|zinc finger protein 280B	BC117873|Zfp280b|64453|zinc finger protein 280B	BC117874|Zfp280b|64453|zinc finger protein 280B
mm9_v1_chr18_+_35750406_35750586	0.135414	FOXD3.p2	AK139050|Matr3|17184|matrin 3	AK084822|Matr3|17184|matrin 3	AK148059|Matr3|17184|matrin 3
mm9_v1_chrX_-_91368713_91368747	0.135318	FOXD3.p2	L19714|Zfx|22764|zinc finger protein X-linked	AK145115|Zfx|22764|zinc finger protein X-linked	NM_001044386|Zfx|22764|zinc finger protein X-linked	NM_011768|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr12_-_82695968_82696003	0.135182	FOXD3.p2	AK005232|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK089101|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr14_-_55710878_55710884	0.135145	FOXD3.p2	AB190186|Zfhx2|239102|zinc finger homeobox 2	NM_001039198|Zfhx2|239102|zinc finger homeobox 2
mm9_v1_chr10_+_127691166_127691233	0.135139	FOXD3.p2	NM_133996|Apon|28194|apolipoprotein N	AK083289|Apon|28194|apolipoprotein N
mm9_v1_chr4_-_147183894_147183948	0.135052	FOXD3.p2	NM_001127189|Gm13157|100041677|predicted gene 13157	AK011687|2610036A22Rik|70190|RIKEN cDNA 2610036A22 gene
mm9_v1_chr18_-_36942673_36942858	0.134886	FOXD3.p2	AK211613|Hars|15115|histidyl-tRNA synthetase	AK011685|Hars|15115|histidyl-tRNA synthetase	AK077437|Hars|15115|histidyl-tRNA synthetase	AK166826|Hars|15115|histidyl-tRNA synthetase	AK150081|Hars|15115|histidyl-tRNA synthetase	AK152329|Hars|15115|histidyl-tRNA synthetase	BC020088|Hars|15115|histidyl-tRNA synthetase	AK088824|Hars|15115|histidyl-tRNA synthetase	AK146922|Hars|15115|histidyl-tRNA synthetase	AK166892|Hars|15115|histidyl-tRNA synthetase	U39473|Hars|15115|histidyl-tRNA synthetase	NM_008214|Hars|15115|histidyl-tRNA synthetase
mm9_v1_chr4_+_122731563_122731731	0.134884	FOXD3.p2	AK188355|Trit1|66966|tRNA isopentenyltransferase 1	AK219389|Trit1|66966|tRNA isopentenyltransferase 1	AK189511|Trit1|66966|tRNA isopentenyltransferase 1
mm9_v1_chr11_+_107340794_107340940	0.13487	FOXD3.p2	AK007619|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK005114|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK152240|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK011806|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK150910|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK152041|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK160283|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	BC004694|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK017843|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK167236|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK008646|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK009969|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK151242|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK162779|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	NM_025894|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK007680|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
mm9_v1_chr2_+_28323580_28323619	0.134568	FOXD3.p2	AK051184|Mrps2|118451|mitochondrial ribosomal protein S2	AK172120|Mrps2|118451|mitochondrial ribosomal protein S2	NM_001166031|Mrps2|118451|mitochondrial ribosomal protein S2	NM_080452|Mrps2|118451|mitochondrial ribosomal protein S2	AK154131|Mrps2|118451|mitochondrial ribosomal protein S2	AB055389|Mrps2|118451|mitochondrial ribosomal protein S2	AK160129|Mrps2|118451|mitochondrial ribosomal protein S2	AK165956|Mrps2|118451|mitochondrial ribosomal protein S2	AK156412|Mrps2|118451|mitochondrial ribosomal protein S2	AK171699|Mrps2|118451|mitochondrial ribosomal protein S2	AK172432|Mrps2|118451|mitochondrial ribosomal protein S2	BC048377|Mrps2|118451|mitochondrial ribosomal protein S2	BC033460|Mrps2|118451|mitochondrial ribosomal protein S2	BC060503|Mrps2|118451|mitochondrial ribosomal protein S2
mm9_v1_chr10_+_127528632_127528696	0.134281	FOXD3.p2	AK140355|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	AK155523|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	AK035400|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	BC020083|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A
mm9_v1_chr4_-_120624286_120624305	0.133834	FOXD3.p2	NM_001005788|Zfp69|381549|zinc finger protein 69
mm9_v1_chr4_-_135609279_135609318	0.132928	FOXD3.p2	AK011211|Rpl11|67025|ribosomal protein L11	AK011800|Rpl11|67025|ribosomal protein L11	AK169053|Rpl11|67025|ribosomal protein L11	AK002998|Rpl11|67025|ribosomal protein L11	AK008422|Rpl11|67025|ribosomal protein L11	AK013923|Rpl11|67025|ribosomal protein L11	AK014593|Rpl11|67025|ribosomal protein L11	AK153486|Rpl11|67025|ribosomal protein L11	AK164445|Rpl11|67025|ribosomal protein L11	NM_025919|Rpl11|67025|ribosomal protein L11	AK088967|Rpl11|67025|ribosomal protein L11
mm9_v1_chr2_+_170557306_170557456	0.13291	FOXD3.p2	BC066822|Dok5|76829|docking protein 5	NM_001163686|Dok5|76829|docking protein 5	NM_029761|Dok5|76829|docking protein 5	AK044148|Dok5|76829|docking protein 5	AF418208|Dok5|76829|docking protein 5
mm9_v1_chr6_-_100621086_100621167	0.132636	FOXD3.p2	BC052657|Shq1|72171|SHQ1 homolog (S. cerevisiae)	AK012978|Shq1|72171|SHQ1 homolog (S. cerevisiae)	NM_181590|Shq1|72171|SHQ1 homolog (S. cerevisiae)
mm9_v1_chr15_+_80629020_80629144	0.132603	FOXD3.p2	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr4_-_49562319_49562386	0.132596	FOXD3.p2	BC026577|Aldob|230163|aldolase B, fructose-bisphosphate	BC034172|Aldob|230163|aldolase B, fructose-bisphosphate	BC034173|Aldob|230163|aldolase B, fructose-bisphosphate	BC022113|Aldob|230163|aldolase B, fructose-bisphosphate	BC034171|Aldob|230163|aldolase B, fructose-bisphosphate	BC036130|Aldob|230163|aldolase B, fructose-bisphosphate	BC016435|Aldob|230163|aldolase B, fructose-bisphosphate	BC036131|Aldob|230163|aldolase B, fructose-bisphosphate	BC036132|Aldob|230163|aldolase B, fructose-bisphosphate	BC036133|Aldob|230163|aldolase B, fructose-bisphosphate	NM_144903|Aldob|230163|aldolase B, fructose-bisphosphate	BC030724|Aldob|230163|aldolase B, fructose-bisphosphate	BC024112|Aldob|230163|aldolase B, fructose-bisphosphate	BC024056|Aldob|230163|aldolase B, fructose-bisphosphate	BC030725|Aldob|230163|aldolase B, fructose-bisphosphate	BC034169|Aldob|230163|aldolase B, fructose-bisphosphate	AK149598|Aldob|230163|aldolase B, fructose-bisphosphate	AK167566|Aldob|230163|aldolase B, fructose-bisphosphate	AK168600|Aldob|230163|aldolase B, fructose-bisphosphate	AK149395|Aldob|230163|aldolase B, fructose-bisphosphate	AK167334|Aldob|230163|aldolase B, fructose-bisphosphate	AK135385|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr2_-_28438765_28438804	0.132479	FOXD3.p2	BC027055|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	AK147014|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	AK137359|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	NM_148928|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr5_+_32761426_32761470	0.132384	FOXD3.p2	AK166168|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166623|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168141|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr14_+_57396489_57396496	0.132244	FOXD3.p2	AK164250|Gm10034|100125977|predicted gene 10034
mm9_v1_chr5_-_130175960_130176006	0.132093	FOXD3.p2	BC058553|Zfp11|22648|zinc finger protein 11	NM_172462|Zfp11|22648|zinc finger protein 11	AK032872|Zfp11|22648|zinc finger protein 11
mm9_v1_chr18_+_38409902_38409977	0.131937	FOXD3.p2	NM_024179|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK035876|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK002437|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK171837|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK079423|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	BC002117|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK141675|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK172900|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene
mm9_v1_chr2_-_79269110_79269144	0.131924	FOXD3.p2	BC046474|Cerkl|228094|ceramide kinase-like	NM_001048176|Cerkl|228094|ceramide kinase-like
mm9_v1_chr1_+_174065263_174065366	0.131845	FOXD3.p2	AK218140|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr7_-_129164546_129164728	0.131836	FOXD3.p2	AK187372|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK129280|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	BC062933|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK004632|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK154904|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK143691|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK159953|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK149798|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	NM_028758|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm9_v1_chr12_-_109241423_109241623	0.131835	FOXD3.p2	BC019503|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AF186019|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AK088219|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043551|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043553|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043583|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_001079883|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_021399|Bcl11b|58208|B-cell leukemia/lymphoma 11B
mm9_v1_chr15_+_102348622_102348920	0.131802	FOXD3.p2	AK143188|Tarbp2|21357|TAR (HIV) RNA binding protein 2	NM_009319|Tarbp2|21357|TAR (HIV) RNA binding protein 2	AK144205|Tarbp2|21357|TAR (HIV) RNA binding protein 2	BC053432|Tarbp2|21357|TAR (HIV) RNA binding protein 2	U79962|Tarbp2|21357|TAR (HIV) RNA binding protein 2	BC002028|Tarbp2|21357|TAR (HIV) RNA binding protein 2
mm9_v1_chr7_-_29123383_29123453	0.131224	FOXD3.p2	BC058598|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)
mm9_v1_chr19_+_13439119_13439119	0.130946	FOXD3.p2	NM_146691|Olfr1467|258686|olfactory receptor 1467
mm9_v1_chr16_+_35770488_35770517	0.13092	FOXD3.p2	AK028824|Hspbap1|66667|Hspb associated protein 1	AK138906|Hspbap1|66667|Hspb associated protein 1	AK049404|Hspbap1|66667|Hspb associated protein 1	AK076189|Hspbap1|66667|Hspb associated protein 1	AK017731|Hspbap1|66667|Hspb associated protein 1
mm9_v1_chr15_-_8660442_8660451	0.130411	FOXD3.p2	AK084968|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr1_-_173177238_173177241	0.129083	FOXD3.p2	AK167016|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr10_-_10277885_10278075	0.128953	FOXD3.p2	AB232627|Rab32|67844|RAB32, member RAS oncogene family	AY135650|Rab32|67844|RAB32, member RAS oncogene family	BC016409|Rab32|67844|RAB32, member RAS oncogene family	BC055945|Rab32|67844|RAB32, member RAS oncogene family	AK163620|Rab32|67844|RAB32, member RAS oncogene family	AK151543|Rab32|67844|RAB32, member RAS oncogene family	AK088661|Rab32|67844|RAB32, member RAS oncogene family	NM_026405|Rab32|67844|RAB32, member RAS oncogene family	AK012701|Rab32|67844|RAB32, member RAS oncogene family	AK159102|Rab32|67844|RAB32, member RAS oncogene family	AK159901|Rab32|67844|RAB32, member RAS oncogene family
mm9_v1_chr13_+_24706474_24706497	0.128737	FOXD3.p2	AK041665|Fam65b|193385|family with sequence similarity 65, member B	NM_178658|Fam65b|193385|family with sequence similarity 65, member B	AK036452|Fam65b|193385|family with sequence similarity 65, member B	AK040887|Fam65b|193385|family with sequence similarity 65, member B
mm9_v1_chr19_+_53385022_53385154	0.128736	FOXD3.p2	D31824|Mxi1|17859|Max interacting protein 1
mm9_v1_chr7_-_134160841_134160854	0.128675	FOXD3.p2	AK013840|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr11_-_3831963_3832085	0.12825	FOXD3.p2	AK143761|Tcn2|21452|transcobalamin 2	NM_001130459|Tcn2|21452|transcobalamin 2	AK161618|Tcn2|21452|transcobalamin 2	AK147176|Tcn2|21452|transcobalamin 2	AK133707|Tcn2|21452|transcobalamin 2	NM_015749|Tcn2|21452|transcobalamin 2	AK170401|Tcn2|21452|transcobalamin 2	NM_001130458|Tcn2|21452|transcobalamin 2
mm9_v1_chr10_-_127188787_127188853	0.128005	FOXD3.p2	AK031480|Gpr182|11536|G protein-coupled receptor 182	NM_007412|Gpr182|11536|G protein-coupled receptor 182
mm9_v1_chr18_+_35989376_35989483	0.127564	FOXD3.p2	AK005364|Cxxc5|67393|CXXC finger 5	BC089314|Cxxc5|67393|CXXC finger 5	NM_133687|Cxxc5|67393|CXXC finger 5
mm9_v1_chr11_+_49064013_49064076	0.12726	FOXD3.p2	AK155322|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	AK004760|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	NM_001110150|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr7_+_29225955_29226034	0.127124	FOXD3.p2	AK009967|Gmfg|63986|glia maturation factor, gamma	NM_001039192|Gmfg|63986|glia maturation factor, gamma	AB003588|Gmfg|63986|glia maturation factor, gamma
mm9_v1_chr16_-_32099802_32099849	0.125823	FOXD3.p2	AK008583|Pigx|72084|phosphatidylinositol glycan anchor biosynthesis, class X	NM_001111025|Pigx|72084|phosphatidylinositol glycan anchor biosynthesis, class X	NM_024464|Pigx|72084|phosphatidylinositol glycan anchor biosynthesis, class X
mm9_v1_chrX_+_72661966_72662056	0.125641	FOXD3.p2	NM_001166457|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_001166459|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_145956|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	S68022|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK149844|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK028483|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK030736|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC021313|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK038919|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK011876|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC048179|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3
mm9_v1_chr8_+_86239094_86239097	0.125377	FOXD3.p2	NM_197982|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm9_v1_chr2_+_122060526_122060603	0.125232	FOXD3.p2	AK152169|Sord|20322|sorbitol dehydrogenase	AK166996|Sord|20322|sorbitol dehydrogenase	AK004692|Sord|20322|sorbitol dehydrogenase	BC024124|Sord|20322|sorbitol dehydrogenase	BC092291|Sord|20322|sorbitol dehydrogenase	AK015059|Sord|20322|sorbitol dehydrogenase	NM_146126|Sord|20322|sorbitol dehydrogenase	AK166988|Sord|20322|sorbitol dehydrogenase	U27014|Sord|20322|sorbitol dehydrogenase	BC039957|Sord|20322|sorbitol dehydrogenase	BC030875|Sord|20322|sorbitol dehydrogenase
mm9_v1_chr16_+_19760300_19760490	0.125169	FOXD3.p2	AK037166|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK083839|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_001159407|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_001159408|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_054052|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK032911|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK048010|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	BC063076|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm9_v1_chr3_+_95238292_95238339	0.125036	FOXD3.p2	AK040475|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	NM_001037737|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	NM_009709|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK028546|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK153355|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK152473|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr11_+_98543871_98543951	0.124614	FOXD3.p2	AK031366|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145467|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145488|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164593|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK169690|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166714|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167005|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164333|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166683|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK089933|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167285|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK077252|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK165520|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK153505|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm9_v1_chr17_+_35195979_35196038	0.124247	FOXD3.p2	NM_001190449|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2	NM_016765|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2	BC003328|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2	BC115555|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2
mm9_v1_chr5_-_21290925_21290949	0.124177	FOXD3.p2	U53208|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK161347|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2
mm9_v1_chr18_-_49915209_49915277	0.124097	FOXD3.p2	BC139347|Dtwd2|68857|DTW domain containing 2	BC139348|Dtwd2|68857|DTW domain containing 2	BC145608|Dtwd2|68857|DTW domain containing 2	BC145609|Dtwd2|68857|DTW domain containing 2	AK004450|Dtwd2|68857|DTW domain containing 2	AK144689|Dtwd2|68857|DTW domain containing 2	NM_001170960|Dtwd2|68857|DTW domain containing 2	NM_026854|Dtwd2|68857|DTW domain containing 2
mm9_v1_chr6_+_47827641_47827690	0.123946	FOXD3.p2	AK030516|Zfp282|101095|zinc finger protein 282	AK081854|Zfp282|101095|zinc finger protein 282	BC025581|Zfp282|101095|zinc finger protein 282
mm9_v1_chr5_-_4104331_4104507	0.123833	FOXD3.p2	AK028355|Cyp51|13121|cytochrome P450, family 51	BC031813|Cyp51|13121|cytochrome P450, family 51	AK031059|Cyp51|13121|cytochrome P450, family 51	AK075764|Cyp51|13121|cytochrome P450, family 51	AK076983|Cyp51|13121|cytochrome P450, family 51	AF166266|Cyp51|13121|cytochrome P450, family 51	AK028815|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr17_-_33170297_33170352	0.123678	FOXD3.p2	BC056193|Zfp763|73451|zinc finger protein 763	AK088750|Zfp763|73451|zinc finger protein 763	AK141711|Zfp763|73451|zinc finger protein 763	NM_028543|Zfp763|73451|zinc finger protein 763
mm9_v1_chr18_+_20823908_20823925	0.123664	FOXD3.p2	AK018701|Ttr|22139|transthyretin	AK014454|Ttr|22139|transthyretin	AK075588|Ttr|22139|transthyretin	BC086926|Ttr|22139|transthyretin	D89076|Ttr|22139|transthyretin	X03351|Ttr|22139|transthyretin	AK050155|Ttr|22139|transthyretin	BC032069|Ttr|22139|transthyretin
mm9_v1_chr1_-_173177242_173177242	0.123641	FOXD3.p2	AK078474|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	NM_153064|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr7_-_35841565_35841620	0.123507	FOXD3.p2	NM_009884|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	S80556|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr13_+_49777464_49777562	0.123414	FOXD3.p2	NM_172015|Iars|105148|isoleucine-tRNA synthetase	BC067029|Iars|105148|isoleucine-tRNA synthetase	AK087992|Iars|105148|isoleucine-tRNA synthetase	AK133856|Iars|105148|isoleucine-tRNA synthetase	AK136132|Iars|105148|isoleucine-tRNA synthetase
mm9_v1_chr7_-_86611065_86611158	0.123199	FOXD3.p2	BC080291|Polg|18975|polymerase (DNA directed), gamma	BC061472|Polg|18975|polymerase (DNA directed), gamma	AK135341|Polg|18975|polymerase (DNA directed), gamma	U53584|Polg|18975|polymerase (DNA directed), gamma	AK133584|Polg|18975|polymerase (DNA directed), gamma	BC053024|Polg|18975|polymerase (DNA directed), gamma	AK148091|Polg|18975|polymerase (DNA directed), gamma	NM_017462|Polg|18975|polymerase (DNA directed), gamma
mm9_v1_chr1_-_165243608_165243611	0.123197	FOXD3.p2	AK089006|Prrx1|18933|paired related homeobox 1
mm9_v1_chr4_+_132091462_132091502	0.122633	FOXD3.p2	AK088325|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	NM_172400|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC137735|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC145655|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK049526|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK150933|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK003892|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK168645|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC064732|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC066222|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC080760|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC057191|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8
mm9_v1_chr11_-_74491006_74491182	0.122455	FOXD3.p2	AK152284|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	AK164276|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm9_v1_chr6_+_58590475_58590601	0.122142	FOXD3.p2	AK142528|Abcg2|26357|ATP-binding cassette, sub-family G (WHITE), member 2
mm9_v1_chr4_-_11181373_11181380	0.121758	FOXD3.p2	AK169552|Ints8|72656|integrator complex subunit 8	AK049513|Ints8|72656|integrator complex subunit 8
mm9_v1_chr11_+_51085400_51085500	0.121737	FOXD3.p2	AF005423|Clk4|12750|CDC like kinase 4	AK161739|Clk4|12750|CDC like kinase 4
mm9_v1_chr3_+_41368846_41368849	0.121674	FOXD3.p2	AK129445|Phf17|269424|PHD finger protein 17
mm9_v1_chr2_+_35413977_35414092	0.121604	FOXD3.p2	NM_001114125|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	DQ473307|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr5_-_145927883_145927892	0.121492	FOXD3.p2	AK088764|Ptcd1|71799|pentatricopeptide repeat domain 1	BC004766|Ptcd1|71799|pentatricopeptide repeat domain 1
mm9_v1_chr4_+_94405963_94405990	0.121296	FOXD3.p2	BC050824|Tek|21687|endothelial-specific receptor tyrosine kinase	D13738|Tek|21687|endothelial-specific receptor tyrosine kinase	NM_013690|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr10_+_127759711_127759783	0.121195	FOXD3.p2	AK213625|Cnpy2|56530|canopy 2 homolog (zebrafish)	BC008261|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK007914|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK013568|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK180663|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr19_-_43827386_43827505	0.121064	FOXD3.p2	AK051792|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	BC021498|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	AK141631|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	BC011509|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	AK048099|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	NM_144874|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)
mm9_v1_chr14_+_58691522_58691522	0.120914	FOXD3.p2	AK158782|Fgf9|14180|fibroblast growth factor 9	NM_013518|Fgf9|14180|fibroblast growth factor 9
mm9_v1_chr10_+_62849310_62849422	0.120894	FOXD3.p2	NM_013888|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AK032207|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AF132906|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC013501|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC071211|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12
mm9_v1_chr6_-_134847832_134848056	0.120867	FOXD3.p2	NM_001167695|Gpr19|14760|G protein-coupled receptor 19	NM_001167696|Gpr19|14760|G protein-coupled receptor 19	BC021648|Gpr19|14760|G protein-coupled receptor 19	AK132917|Gpr19|14760|G protein-coupled receptor 19	AK140770|Gpr19|14760|G protein-coupled receptor 19	AK160688|Gpr19|14760|G protein-coupled receptor 19	NM_001167693|Gpr19|14760|G protein-coupled receptor 19	NM_001167694|Gpr19|14760|G protein-coupled receptor 19	NM_001167700|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr6_+_88415396_88415624	0.120788	FOXD3.p2	NM_019685|Ruvbl1|56505|RuvB-like protein 1	AK146374|Ruvbl1|56505|RuvB-like protein 1	AK146258|Ruvbl1|56505|RuvB-like protein 1	AK132783|Ruvbl1|56505|RuvB-like protein 1	AK156078|Ruvbl1|56505|RuvB-like protein 1	BC004718|Ruvbl1|56505|RuvB-like protein 1	AK145062|Ruvbl1|56505|RuvB-like protein 1	AK012170|Ruvbl1|56505|RuvB-like protein 1
mm9_v1_chr8_+_87432522_87432575	0.120304	FOXD3.p2	AK145192|Dnase2a|13423|deoxyribonuclease II alpha	NM_010062|Dnase2a|13423|deoxyribonuclease II alpha	AK167277|Dnase2a|13423|deoxyribonuclease II alpha	BC058609|Dnase2a|13423|deoxyribonuclease II alpha
mm9_v1_chr1_+_37929013_37929099	0.120094	FOXD3.p2	AK048005|Lipt1|623661|lipoyltransferase 1	NM_001037918|Lipt1|623661|lipoyltransferase 1	BC019519|Lipt1|623661|lipoyltransferase 1
mm9_v1_chr2_-_155984800_155984951	0.119849	FOXD3.p2	AK134091|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr9_+_74709673_74709752	0.119774	FOXD3.p2	BC024053|Onecut1|15379|one cut domain, family member 1	NM_008262|Onecut1|15379|one cut domain, family member 1
mm9_v1_chr10_-_29255606_29255672	0.119689	FOXD3.p2	BC103794|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK076308|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK013366|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AB055811|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK133916|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	NM_028351|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)
mm9_v1_chr8_+_13339673_13339702	0.119659	FOXD3.p2	NM_009361|Tfdp1|21781|transcription factor Dp 1	X72310|Tfdp1|21781|transcription factor Dp 1	BC132567|Tfdp1|21781|transcription factor Dp 1	BC132569|Tfdp1|21781|transcription factor Dp 1	BC145344|Tfdp1|21781|transcription factor Dp 1
mm9_v1_chr1_-_65225583_65225732	0.119546	FOXD3.p2	AK087063|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK151212|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK149019|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK159173|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK160896|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK167583|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK167158|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK168832|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	BC088986|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	NM_010497|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble
mm9_v1_chr5_+_130698192_130698294	0.119418	FOXD3.p2	AK142176|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK171152|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK002297|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK171607|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	BC033455|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene
mm9_v1_chr5_+_65221116_65221144	0.119134	FOXD3.p2	AK036932|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr7_+_120909625_120909653	0.119131	FOXD3.p2	BC020531|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr3_+_159158396_159158460	0.118964	FOXD3.p2	NM_001172092|Depdc1a|76131|DEP domain containing 1a	NM_001172093|Depdc1a|76131|DEP domain containing 1a	NM_029523|Depdc1a|76131|DEP domain containing 1a	BC023934|Depdc1a|76131|DEP domain containing 1a	AK088719|Depdc1a|76131|DEP domain containing 1a	AK146458|Depdc1a|76131|DEP domain containing 1a	AK050456|Depdc1a|76131|DEP domain containing 1a
mm9_v1_chr4_-_46402288_46402309	0.118945	FOXD3.p2	AK044073|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	AK153576|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	NM_029086|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	BC092543|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	AK017931|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	AK052584|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene
mm9_v1_chr5_-_100465086_100465197	0.118853	FOXD3.p2	AK011143|Hnrpdl|50926|heterogeneous nuclear ribonucleoprotein D-like
mm9_v1_chr11_-_35647952_35648029	0.118599	FOXD3.p2	BC020132|Rars|104458|arginyl-tRNA synthetase	AK076160|Rars|104458|arginyl-tRNA synthetase	AK149856|Rars|104458|arginyl-tRNA synthetase	AK152108|Rars|104458|arginyl-tRNA synthetase	AK160216|Rars|104458|arginyl-tRNA synthetase	AK166097|Rars|104458|arginyl-tRNA synthetase	AK168194|Rars|104458|arginyl-tRNA synthetase	AK011383|Rars|104458|arginyl-tRNA synthetase	NM_025936|Rars|104458|arginyl-tRNA synthetase
mm9_v1_chr13_-_93962125_93962314	0.118497	FOXD3.p2	AK146086|Papd4|100715|PAP associated domain containing 4	BC016629|Papd4|100715|PAP associated domain containing 4	NM_133905|Papd4|100715|PAP associated domain containing 4
mm9_v1_chr19_+_5041341_5041422	0.118493	FOXD3.p2	AF233580|Brms1|107392|breast cancer metastasis-suppressor 1	AK076729|Brms1|107392|breast cancer metastasis-suppressor 1	BC016108|Brms1|107392|breast cancer metastasis-suppressor 1	NM_134155|Brms1|107392|breast cancer metastasis-suppressor 1	BC003485|Brms1|107392|breast cancer metastasis-suppressor 1
mm9_v1_chr2_+_160471695_160471802	0.118489	FOXD3.p2	AK164061|Top1|21969|topoisomerase (DNA) I	AK083930|Top1|21969|topoisomerase (DNA) I	AK166844|Top1|21969|topoisomerase (DNA) I	BC048743|Top1|21969|topoisomerase (DNA) I	BC002095|Top1|21969|topoisomerase (DNA) I	AK160590|Top1|21969|topoisomerase (DNA) I	BC092349|Top1|21969|topoisomerase (DNA) I
mm9_v1_chr8_+_73053287_73053425	0.118449	FOXD3.p2	BC003739|Fkbp8|14232|FK506 binding protein 8	AY225340|Fkbp8|14232|FK506 binding protein 8	AK216136|Fkbp8|14232|FK506 binding protein 8	AF030635|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr7_+_89003886_89004046	0.118265	FOXD3.p2	AK083132|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK135100|Tm6sf1|107769|transmembrane 6 superfamily member 1	NM_145375|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK163621|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK172109|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK046714|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK172145|Tm6sf1|107769|transmembrane 6 superfamily member 1	BC023123|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK162572|Tm6sf1|107769|transmembrane 6 superfamily member 1
mm9_v1_chr2_+_30271579_30271778	0.118237	FOXD3.p2	AK049184|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC006626|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC052852|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK160980|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AY035997|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK046288|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr12_+_7984451_7984482	0.118182	FOXD3.p2	BC100607|Apob|238055|apolipoprotein B	BC028880|Apob|238055|apolipoprotein B	BC038263|Apob|238055|apolipoprotein B	NM_009693|Apob|238055|apolipoprotein B
mm9_v1_chr9_-_44728790_44728826	0.1178	FOXD3.p2	AK011099|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019320|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008036|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008169|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	BC089555|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005380|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	NM_013795|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
mm9_v1_chr13_-_97419369_97419378	0.117752	FOXD3.p2	AK051107|Hmgcr|15357|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm9_v1_chr9_-_106691395_106691543	0.117696	FOXD3.p2	BC133714|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	AK155151|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	AK090250|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	AK083903|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	NM_030730|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)
mm9_v1_chr17_-_35371948_35372113	0.117526	FOXD3.p2	X96706|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
mm9_v1_chr9_+_99476204_99476272	0.117467	FOXD3.p2	AK050090|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)	NM_031403|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)	BC006661|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)	AK139631|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)	AK090351|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)
mm9_v1_chr13_+_56804370_56804503	0.11704	FOXD3.p2	NM_008541|Smad5|17129|MAD homolog 5 (Drosophila)	AK018077|Smad5|17129|MAD homolog 5 (Drosophila)	AF063006|Smad5|17129|MAD homolog 5 (Drosophila)	NM_001164041|Smad5|17129|MAD homolog 5 (Drosophila)	U58993|Smad5|17129|MAD homolog 5 (Drosophila)	AK139765|Smad5|17129|MAD homolog 5 (Drosophila)	BC048233|Smad5|17129|MAD homolog 5 (Drosophila)	BC050001|Smad5|17129|MAD homolog 5 (Drosophila)
mm9_v1_chr11_-_102180258_102180276	0.116975	FOXD3.p2	AK004961|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr4_+_155205723_155205804	0.116706	FOXD3.p2	AK003442|Aurkaip1|66077|aurora kinase A interacting protein 1	NM_025338|Aurkaip1|66077|aurora kinase A interacting protein 1	AK002737|Aurkaip1|66077|aurora kinase A interacting protein 1	AK158165|Aurkaip1|66077|aurora kinase A interacting protein 1	AK033452|Aurkaip1|66077|aurora kinase A interacting protein 1	AK166049|Aurkaip1|66077|aurora kinase A interacting protein 1	BC011245|Aurkaip1|66077|aurora kinase A interacting protein 1	AK144719|Aurkaip1|66077|aurora kinase A interacting protein 1
mm9_v1_chr10_+_39332934_39333058	0.116605	FOXD3.p2	AK037407|Traf3ip2|103213|TRAF3 interacting protein 2	BC138234|Traf3ip2|103213|TRAF3 interacting protein 2	BC138235|Traf3ip2|103213|TRAF3 interacting protein 2	AK031556|Traf3ip2|103213|TRAF3 interacting protein 2	AK098107|Traf3ip2|103213|TRAF3 interacting protein 2	BC096483|Traf3ip2|103213|TRAF3 interacting protein 2
mm9_v1_chr1_+_66747396_66747477	0.116554	FOXD3.p2	AK150008|Rpe|66646|ribulose-5-phosphate-3-epimerase	BC019126|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK029088|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK007735|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK017774|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK088152|Rpe|66646|ribulose-5-phosphate-3-epimerase	NM_025683|Rpe|66646|ribulose-5-phosphate-3-epimerase	Z78161|Rpe|66646|ribulose-5-phosphate-3-epimerase	BC006953|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK185217|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK193547|Rpe|66646|ribulose-5-phosphate-3-epimerase
mm9_v1_chr17_-_66121883_66122091	0.116511	FOXD3.p2	AB232617|Rab31|106572|RAB31, member RAS oncogene family	AK159095|Rab31|106572|RAB31, member RAS oncogene family	AK166151|Rab31|106572|RAB31, member RAS oncogene family	AK051270|Rab31|106572|RAB31, member RAS oncogene family	BC013063|Rab31|106572|RAB31, member RAS oncogene family	AK156677|Rab31|106572|RAB31, member RAS oncogene family	NM_133685|Rab31|106572|RAB31, member RAS oncogene family
mm9_v1_chr7_+_134439804_134439861	0.116408	FOXD3.p2	AK156251|Itgal|16408|integrin alpha L	AK172394|Itgal|16408|integrin alpha L	AK154115|Itgal|16408|integrin alpha L	AK169628|Itgal|16408|integrin alpha L	NM_008400|Itgal|16408|integrin alpha L
mm9_v1_chr7_+_107422781_107422864	0.115934	FOXD3.p2	AK043357|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr12_+_80398268_80398337	0.115856	FOXD3.p2	AK032913|Rad51l1|19363|RAD51-like 1 (S. cerevisiae)	NM_009014|Rad51l1|19363|RAD51-like 1 (S. cerevisiae)	AK015771|Rad51l1|19363|RAD51-like 1 (S. cerevisiae)
mm9_v1_chr1_+_34062720_34062743	0.115589	FOXD3.p2	AK039885|Dst|13518|dystonin
mm9_v1_chr1_-_39634096_39634285	0.115498	FOXD3.p2	BC115968|Rnf149|67702|ring finger protein 149	NM_001033135|Rnf149|67702|ring finger protein 149	AK155360|Rnf149|67702|ring finger protein 149
mm9_v1_chr7_-_149838254_149838314	0.115183	FOXD3.p2	AK146531|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr2_+_164658367_164658483	0.114929	FOXD3.p2	NM_001038492|Ctsa|19025|cathepsin A	NM_008906|Ctsa|19025|cathepsin A	AK019861|Ctsa|19025|cathepsin A	J05261|Ctsa|19025|cathepsin A
mm9_v1_chr10_+_80568647_80568919	0.114857	FOXD3.p2	AK080574|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK172055|Map2k2|26396|mitogen-activated protein kinase kinase 2	NM_023138|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK171584|Map2k2|26396|mitogen-activated protein kinase kinase 2	BC014830|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK143425|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK138130|Map2k2|26396|mitogen-activated protein kinase kinase 2	S68267|Map2k2|26396|mitogen-activated protein kinase kinase 2
mm9_v1_chr7_-_151656610_151656667	0.11483	FOXD3.p2	U03184|Cttn|13043|cortactin	BC011434|Cttn|13043|cortactin	AK168871|Cttn|13043|cortactin	AK165555|Cttn|13043|cortactin	AK168699|Cttn|13043|cortactin	AK148010|Cttn|13043|cortactin	AK146856|Cttn|13043|cortactin	NM_007803|Cttn|13043|cortactin	AK084249|Cttn|13043|cortactin	AK168945|Cttn|13043|cortactin
mm9_v1_chr3_+_95697820_95698061	0.114708	FOXD3.p2	AK148400|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC057865|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	AK152334|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC012406|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146104|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC024111|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146134|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)
mm9_v1_chr7_+_19876447_19876478	0.114696	FOXD3.p2	NM_001025364|Rtn2|20167|reticulon 2 (Z-band associated protein)	AK160500|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038539|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr18_-_78006524_78006535	0.114675	FOXD3.p2	AK147599|Haus1|225745|HAUS augmin-like complex, subunit 1
mm9_v1_chr17_-_24210402_24210430	0.114616	FOXD3.p2	BC021777|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK129077|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK143644|Kctd5|69259|potassium channel tetramerisation domain containing 5
mm9_v1_chr11_+_78141923_78141987	0.114573	FOXD3.p2	BC058979|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	NM_201406|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK166408|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK033331|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK043232|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK053771|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK039604|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK045759|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK142871|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK158128|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK169633|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK153300|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK151858|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK152229|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S
mm9_v1_chr9_-_48288692_48288741	0.11445	FOXD3.p2	AK007731|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	NM_024233|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK090202|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)
mm9_v1_chr5_-_120953567_120953653	0.114399	FOXD3.p2	AK030234|Plbd2|71772|phospholipase B domain containing 2	BC026395|Plbd2|71772|phospholipase B domain containing 2	BC038605|Plbd2|71772|phospholipase B domain containing 2	AF217003|Plbd2|71772|phospholipase B domain containing 2	BC060095|Plbd2|71772|phospholipase B domain containing 2	AK164220|Plbd2|71772|phospholipase B domain containing 2	AK170631|Plbd2|71772|phospholipase B domain containing 2	BC048826|Plbd2|71772|phospholipase B domain containing 2	AK043608|Plbd2|71772|phospholipase B domain containing 2	AK046937|Plbd2|71772|phospholipase B domain containing 2	AK150201|Plbd2|71772|phospholipase B domain containing 2	AK170387|Plbd2|71772|phospholipase B domain containing 2	AK032930|Plbd2|71772|phospholipase B domain containing 2	AK042089|Plbd2|71772|phospholipase B domain containing 2	AK029813|Plbd2|71772|phospholipase B domain containing 2	NM_023625|Plbd2|71772|phospholipase B domain containing 2	AK004973|Plbd2|71772|phospholipase B domain containing 2
mm9_v1_chr1_+_40082070_40082114	0.114309	FOXD3.p2	AK159799|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr5_+_137463234_137463356	0.113742	FOXD3.p2	AK053320|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK013195|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK033360|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK157741|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chr4_+_55093796_55093934	0.113725	FOXD3.p2	AK035041|Zfp462|242466|zinc finger protein 462
mm9_v1_chr18_+_24363784_24363941	0.11369	FOXD3.p2	NM_013814|Galnt1|14423|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1	BC056215|Galnt1|14423|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
mm9_v1_chr5_+_137429121_137429188	0.113679	FOXD3.p2	NM_001163243|Fis1|66437|fission 1 (mitochondrial outer membrane) homolog (yeast)
mm9_v1_chr12_+_4082573_4082658	0.113667	FOXD3.p2	NM_153082|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC051140|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	AK049300|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC042643|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr10_+_128143313_128143342	0.113619	FOXD3.p2	AK012808|Pmel|20431|premelanosome protein	AK131956|Pmel|20431|premelanosome protein	NM_021882|Pmel|20431|premelanosome protein	BC075667|Pmel|20431|premelanosome protein	BC082555|Pmel|20431|premelanosome protein	U14133|Pmel|20431|premelanosome protein
mm9_v1_chr16_+_5086296_5086328	0.113583	FOXD3.p2	
mm9_v1_chr9_-_79566528_79566565	0.113577	FOXD3.p2	AK028536|Col12a1|12816|collagen, type XII, alpha 1
mm9_v1_chr1_-_170361789_170361795	0.113296	FOXD3.p2	AK084143|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr2_-_69551514_69551609	0.113075	FOXD3.p2	AK030411|Fastkd1|320720|FAST kinase domains 1	AK083186|Fastkd1|320720|FAST kinase domains 1
mm9_v1_chr7_+_36371265_36371319	0.113001	FOXD3.p2	NM_145633|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	NM_178263|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AK085796|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	BC016493|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AK052177|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AY336500|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AK144733|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	BC065093|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AK153853|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)
mm9_v1_chr11_+_48613820_48613894	0.112888	FOXD3.p2	AK168349|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166868|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166786|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166800|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK017772|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK051226|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK159797|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK161234|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166945|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK168086|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK168096|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK168196|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK169612|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	NM_008143|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK160739|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	D29802|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	X75313|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK002493|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166417|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	BC046760|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	BC020322|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK160528|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chr5_-_129514313_129514509	0.112819	FOXD3.p2	BC046279|Stx2|13852|syntaxin 2	AK165552|Stx2|13852|syntaxin 2	AK146462|Stx2|13852|syntaxin 2	AK167577|Stx2|13852|syntaxin 2	AK168067|Stx2|13852|syntaxin 2	NM_007941|Stx2|13852|syntaxin 2	D10475|Stx2|13852|syntaxin 2
mm9_v1_chr18_+_77168765_77168895	0.112759	FOXD3.p2	NM_025409|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK004281|Ier3ip1|66191|immediate early response 3 interacting protein 1	BC021512|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007388|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007862|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK009116|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK182132|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK190140|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK210106|Ier3ip1|66191|immediate early response 3 interacting protein 1
mm9_v1_chr14_-_123312303_123312411	0.112734	FOXD3.p2	BC080839|A2ld1|223267|AIG2-like domain 1	BC006662|A2ld1|223267|AIG2-like domain 1	AK050251|A2ld1|223267|AIG2-like domain 1	NM_145466|A2ld1|223267|AIG2-like domain 1
mm9_v1_chr3_-_73512139_73512177	0.112686	FOXD3.p2	AK052200|Bche|12038|butyrylcholinesterase	BC099977|Bche|12038|butyrylcholinesterase
mm9_v1_chr19_+_5493612_5493771	0.112622	FOXD3.p2	AK195534|Cfl1|12631|cofilin 1, non-muscle	AK198064|Cfl1|12631|cofilin 1, non-muscle	AK200194|Cfl1|12631|cofilin 1, non-muscle	AK208902|Cfl1|12631|cofilin 1, non-muscle	AK215762|Cfl1|12631|cofilin 1, non-muscle
mm9_v1_chr3_-_90237092_90237456	0.112347	FOXD3.p2	BC055344|Ints3|229543|integrator complex subunit 3	AK033296|Ints3|229543|integrator complex subunit 3	AK146699|Ints3|229543|integrator complex subunit 3
mm9_v1_chr19_-_14671832_14671910	0.112161	FOXD3.p2	AF229633|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr17_-_45570655_45570685	0.11216	FOXD3.p2	BC031480|Cdc5l|71702|cell division cycle 5-like (S. pombe)	NM_152810|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK004547|Cdc5l|71702|cell division cycle 5-like (S. pombe)
mm9_v1_chr10_+_80639371_80639387	0.111933	FOXD3.p2	NM_007907|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr17_-_24580867_24580878	0.111932	FOXD3.p2	AK178081|E4f1|13560|E4F transcription factor 1
mm9_v1_chr17_+_17511515_17511560	0.111747	FOXD3.p2	AK090011|Riok2|67045|RIO kinase 2 (yeast)	AK008385|Riok2|67045|RIO kinase 2 (yeast)	AK008451|Riok2|67045|RIO kinase 2 (yeast)	AK049232|Riok2|67045|RIO kinase 2 (yeast)	BC010781|Riok2|67045|RIO kinase 2 (yeast)
mm9_v1_chr2_-_60590923_60591029	0.111676	FOXD3.p2	AK201259|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr2_-_145760400_145760466	0.111559	FOXD3.p2	BC029187|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK004749|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	NM_025820|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK078271|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK088882|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK012962|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK020002|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)
mm9_v1_chr11_-_99091732_99091806	0.111388	FOXD3.p2	BC034509|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	BC061498|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	BC047141|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	AK018493|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	AK042961|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327022|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327023|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327024|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327025|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327026|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	AK076177|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm9_v1_chr6_-_65094862_65094901	0.111046	FOXD3.p2	D82072|Hpgds|54486|hematopoietic prostaglandin D synthase
mm9_v1_chr6_+_134870418_134870458	0.11042	FOXD3.p2	AK047669|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	NM_009875|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK050240|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK158411|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	BC014296|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr2_-_147011990_147012137	0.110265	FOXD3.p2	AK043561|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138159|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138160|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	U31566|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	AK141002|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_001077632|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_010919|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)
mm9_v1_chr1_+_134195202_134195202	0.110236	FOXD3.p2	AK080356|Klhdc8a|213417|kelch domain containing 8A	NM_144810|Klhdc8a|213417|kelch domain containing 8A
mm9_v1_chr6_+_135313056_135313087	0.109925	FOXD3.p2	AK168806|Emp1|13730|epithelial membrane protein 1	U25633|Emp1|13730|epithelial membrane protein 1	BC138491|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr3_+_129235284_129235325	0.109874	FOXD3.p2	AK087440|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK029029|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	NM_130450|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC051041|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AY053453|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chr5_-_144090853_144090920	0.109748	FOXD3.p2	AK156167|Zdhhc4|72881|zinc finger, DHHC domain containing 4	BC019523|Zdhhc4|72881|zinc finger, DHHC domain containing 4	AK013609|Zdhhc4|72881|zinc finger, DHHC domain containing 4	NM_028379|Zdhhc4|72881|zinc finger, DHHC domain containing 4
mm9_v1_chr7_-_106632113_106632218	0.109563	FOXD3.p2	AK206775|Rps3|27050|ribosomal protein S3	X76772|Rps3|27050|ribosomal protein S3	BC010721|Rps3|27050|ribosomal protein S3	AK165174|Rps3|27050|ribosomal protein S3	AK167266|Rps3|27050|ribosomal protein S3	AK168845|Rps3|27050|ribosomal protein S3	AK150479|Rps3|27050|ribosomal protein S3	AK003181|Rps3|27050|ribosomal protein S3	AK011655|Rps3|27050|ribosomal protein S3	AK146796|Rps3|27050|ribosomal protein S3	AK012234|Rps3|27050|ribosomal protein S3	AK012314|Rps3|27050|ribosomal protein S3	AK012538|Rps3|27050|ribosomal protein S3	AK088038|Rps3|27050|ribosomal protein S3	AK143603|Rps3|27050|ribosomal protein S3	AK148030|Rps3|27050|ribosomal protein S3	AK160526|Rps3|27050|ribosomal protein S3	AK167210|Rps3|27050|ribosomal protein S3	AK010579|Rps3|27050|ribosomal protein S3	AK010678|Rps3|27050|ribosomal protein S3	AK051243|Rps3|27050|ribosomal protein S3	AK146165|Rps3|27050|ribosomal protein S3	AK159508|Rps3|27050|ribosomal protein S3	AK164077|Rps3|27050|ribosomal protein S3	AK166750|Rps3|27050|ribosomal protein S3	NM_012052|Rps3|27050|ribosomal protein S3
mm9_v1_chr4_-_155608885_155608924	0.108602	FOXD3.p2	AK154523|Klhl17|231003|kelch-like 17 (Drosophila)	AK170825|Klhl17|231003|kelch-like 17 (Drosophila)	BC139309|Klhl17|231003|kelch-like 17 (Drosophila)	AK049214|Klhl17|231003|kelch-like 17 (Drosophila)
mm9_v1_chr5_-_122906470_122906515	0.108048	FOXD3.p2	AK081191|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr7_-_25873560_25873562	0.107957	FOXD3.p2	
mm9_v1_chr7_-_52347489_52347600	0.107828	FOXD3.p2	BC092069|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK077943|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK082762|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK086705|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK132143|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC025602|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC055903|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	NM_026555|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain
mm9_v1_chr7_-_29910144_29910197	0.10765	FOXD3.p2	D21796|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AY268935|Ryr1|20190|ryanodine receptor 1, skeletal muscle	NM_009109|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AK081432|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AK143310|Ryr1|20190|ryanodine receptor 1, skeletal muscle
mm9_v1_chr16_-_57754816_57754849	0.107618	FOXD3.p2	BC011061|Col8a1|12837|collagen, type VIII, alpha 1	BC058281|Col8a1|12837|collagen, type VIII, alpha 1	AK159542|Col8a1|12837|collagen, type VIII, alpha 1	AK029203|Col8a1|12837|collagen, type VIII, alpha 1	AK018742|Col8a1|12837|collagen, type VIII, alpha 1	AK032048|Col8a1|12837|collagen, type VIII, alpha 1	AK046370|Col8a1|12837|collagen, type VIII, alpha 1	NM_007739|Col8a1|12837|collagen, type VIII, alpha 1
mm9_v1_chr6_+_48626133_48626222	0.107492	FOXD3.p2	NM_174960|Gimap9|317758|GTPase, IMAP family member 9	AK041336|Gimap9|317758|GTPase, IMAP family member 9	BC096680|Gimap9|317758|GTPase, IMAP family member 9	BC038043|Gimap9|317758|GTPase, IMAP family member 9
mm9_v1_chr1_+_57463594_57463619	0.107467	FOXD3.p2	AK165130|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	AK007831|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	BC071241|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene
mm9_v1_chr4_-_34634507_34634712	0.107401	FOXD3.p2	Z71268|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	BC012252|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	AK144170|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	NM_011895|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm9_v1_chrX_-_101866402_101866402	0.107365	FOXD3.p2	AK132304|Zdhhc15|108672|zinc finger, DHHC domain containing 15	NM_175358|Zdhhc15|108672|zinc finger, DHHC domain containing 15
mm9_v1_chr6_-_112646587_112646665	0.107343	FOXD3.p2	AF205278|Rad18|58186|RAD18 homolog (S. cerevisiae)	BC011120|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK048975|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK028505|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK012795|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK030043|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_001167730|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_021385|Rad18|58186|RAD18 homolog (S. cerevisiae)
mm9_v1_chr9_+_65524331_65524426	0.107287	FOXD3.p2	AK169243|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	NM_010952|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK143231|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK146074|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK160444|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168853|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168662|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC055442|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC083114|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AF057298|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC005477|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC110690|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene
mm9_v1_chr15_+_79501284_79501317	0.10687	FOXD3.p2	AK008133|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK009868|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	NM_172609|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150787|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK013471|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK049442|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150360|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK152843|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK167803|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	BC056920|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)
mm9_v1_chr4_-_3762733_3762742	0.106425	FOXD3.p2	BC011323|Rps20|67427|ribosomal protein S20	BC090389|Rps20|67427|ribosomal protein S20	AK150867|Rps20|67427|ribosomal protein S20
mm9_v1_chr8_+_13785611_13785668	0.106276	FOXD3.p2	AK020823|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	BC116988|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	BC119035|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	NM_025924|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK033239|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK011127|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK166277|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK016053|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK145471|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)
mm9_v1_chr3_+_122432075_122432112	0.106081	FOXD3.p2	AF541937|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	NM_153422|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC119137|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC120486|Pde5a|242202|phosphodiesterase 5A, cGMP-specific
mm9_v1_chr11_-_76891909_76891951	0.105919	FOXD3.p2	BC016601|Ccdc55|237859|coiled-coil domain containing 55	AK041865|Ccdc55|237859|coiled-coil domain containing 55	AK046155|Ccdc55|237859|coiled-coil domain containing 55	AK078762|Ccdc55|237859|coiled-coil domain containing 55	AK162143|Ccdc55|237859|coiled-coil domain containing 55	AK168573|Ccdc55|237859|coiled-coil domain containing 55	AK078945|Ccdc55|237859|coiled-coil domain containing 55	AK162990|Ccdc55|237859|coiled-coil domain containing 55	NM_001012309|Ccdc55|237859|coiled-coil domain containing 55	AK038056|Ccdc55|237859|coiled-coil domain containing 55	AK161058|Ccdc55|237859|coiled-coil domain containing 55
mm9_v1_chr11_-_86807135_86807208	0.105853	FOXD3.p2	BC121190|Ypel2|77864|yippee-like 2 (Drosophila)	AK089126|Ypel2|77864|yippee-like 2 (Drosophila)	AK021387|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr8_-_114516147_114516201	0.105726	FOXD3.p2	BC019976|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK039699|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK161044|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK035614|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK082399|Adat1|30947|adenosine deaminase, tRNA-specific 1	NM_013925|Adat1|30947|adenosine deaminase, tRNA-specific 1
mm9_v1_chr19_+_36158191_36158279	0.105189	FOXD3.p2	NM_019428|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	AK004137|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	BC062146|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	U95123|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	AK160536|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	AK169253|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)
mm9_v1_chr16_-_26371711_26371924	0.105047	FOXD3.p2	CT010299|Cldn1|12737|claudin 1	EU076705|Cldn1|12737|claudin 1	BC008536|Cldn1|12737|claudin 1	AF072127|Cldn1|12737|claudin 1	AK054207|Cldn1|12737|claudin 1	BC002003|Cldn1|12737|claudin 1	AK036762|Cldn1|12737|claudin 1	AK028428|Cldn1|12737|claudin 1	AK081601|Cldn1|12737|claudin 1	AK036780|Cldn1|12737|claudin 1	AK040604|Cldn1|12737|claudin 1	NM_016674|Cldn1|12737|claudin 1
mm9_v1_chr18_-_72367655_72367683	0.105025	FOXD3.p2	
mm9_v1_chr16_+_22920274_22920459	0.104844	FOXD3.p2	NM_001083904|Fetub|59083|fetuin beta	NM_021564|Fetub|59083|fetuin beta	AY138459|Fetub|59083|fetuin beta	AJ242927|Fetub|59083|fetuin beta
mm9_v1_chr13_-_24923314_24923388	0.104737	FOXD3.p2	AK008624|Acot13|66834|acyl-CoA thioesterase 13	BC018165|Acot13|66834|acyl-CoA thioesterase 13	BC096567|Acot13|66834|acyl-CoA thioesterase 13	AK002261|Acot13|66834|acyl-CoA thioesterase 13	NM_025790|Acot13|66834|acyl-CoA thioesterase 13	AK144523|Acot13|66834|acyl-CoA thioesterase 13
mm9_v1_chr8_-_108224931_108224989	0.104726	FOXD3.p2	AK171345|Acd|497652|adrenocortical dysplasia	AK160599|Acd|497652|adrenocortical dysplasia	BC138694|Acd|497652|adrenocortical dysplasia	BC138695|Acd|497652|adrenocortical dysplasia	BC145384|Acd|497652|adrenocortical dysplasia	AK032683|Acd|497652|adrenocortical dysplasia	AK145959|Acd|497652|adrenocortical dysplasia	AK171458|Acd|497652|adrenocortical dysplasia	AK052768|Acd|497652|adrenocortical dysplasia
mm9_v1_chr17_+_45704145_45704512	0.104711	FOXD3.p2	AK211181|Slc35b2|73836|solute carrier family 35, member B2	AK212100|Slc35b2|73836|solute carrier family 35, member B2	AK207266|Slc35b2|73836|solute carrier family 35, member B2	AK212091|Slc35b2|73836|solute carrier family 35, member B2	AK214463|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr3_+_40439675_40439741	0.104611	FOXD3.p2	NM_175515|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	AK035092|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC125523|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC132387|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)
mm9_v1_chr5_-_105411580_105411736	0.104551	FOXD3.p2	BC029095|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK037614|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AF324242|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK051880|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK156626|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138773|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138772|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	NM_030239|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK030831|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3
mm9_v1_chr11_-_41995688_41995930	0.104244	FOXD3.p2	X61430|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	AK039496|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	M86566|Gabra1|14394|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
mm9_v1_chr10_-_117147757_117147818	0.104225	FOXD3.p2	AK168690|Mdm2|17246|transformed mouse 3T3 cell double minute 2	BC092270|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK004719|Mdm2|17246|transformed mouse 3T3 cell double minute 2	NM_010786|Mdm2|17246|transformed mouse 3T3 cell double minute 2
mm9_v1_chr11_-_86922163_86922249	0.104172	FOXD3.p2	AK040348|Prr11|270906|proline rich 11	AK047463|Prr11|270906|proline rich 11	AK083651|Prr11|270906|proline rich 11	NM_175563|Prr11|270906|proline rich 11
mm9_v1_chr2_-_181316671_181316722	0.104138	FOXD3.p2	BC016535|Uckl1|68556|uridine-cytidine kinase 1-like 1	NM_026765|Uckl1|68556|uridine-cytidine kinase 1-like 1	AK144803|Uckl1|68556|uridine-cytidine kinase 1-like 1
mm9_v1_chr8_-_73421276_73421316	0.103934	FOXD3.p2	BC024609|Rpl18a|76808|ribosomal protein L18A	AK150820|Rpl18a|76808|ribosomal protein L18A	AK152611|Rpl18a|76808|ribosomal protein L18A	AK168258|Rpl18a|76808|ribosomal protein L18A	AK010983|Rpl18a|76808|ribosomal protein L18A	AK146543|Rpl18a|76808|ribosomal protein L18A	AK161942|Rpl18a|76808|ribosomal protein L18A	AK162047|Rpl18a|76808|ribosomal protein L18A	NM_001111116|Gm15427|100041686|predicted pseudogene 15427
mm9_v1_chr18_-_85120875_85120936	0.103213	FOXD3.p2	AK017477|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	BC034297|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK029037|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK012203|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK032468|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	NM_025969|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene
mm9_v1_chr8_+_130883291_130883299	0.103099	FOXD3.p2	AK135428|Nrp1|18186|neuropilin 1
mm9_v1_chr3_+_94914936_94915064	0.103096	FOXD3.p2	BC043029|Vps72|21427|vacuolar protein sorting 72 (yeast)	NM_009336|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK140284|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK155191|Vps72|21427|vacuolar protein sorting 72 (yeast)	BC004834|Vps72|21427|vacuolar protein sorting 72 (yeast)	D43643|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK179387|Vps72|21427|vacuolar protein sorting 72 (yeast)
mm9_v1_chr2_-_26207531_26207599	0.102919	FOXD3.p2	BC031595|Dnlz|52838|DNL-type zinc finger	BC139334|Dnlz|52838|DNL-type zinc finger	BC139333|Dnlz|52838|DNL-type zinc finger
mm9_v1_chr8_+_13869640_13869740	0.102805	FOXD3.p2	NM_181854|Zfp828|101994|zinc finger protein 828	AK132164|Zfp828|101994|zinc finger protein 828	AK170835|Zfp828|101994|zinc finger protein 828	AK139963|Zfp828|101994|zinc finger protein 828	AK133990|Zfp828|101994|zinc finger protein 828	BC028991|Zfp828|101994|zinc finger protein 828	AK129444|Zfp828|101994|zinc finger protein 828
mm9_v1_chr6_-_13557981_13558062	0.102703	FOXD3.p2	BC024911|Tmem168|101118|transmembrane protein 168	BC007160|Tmem168|101118|transmembrane protein 168	AK054353|Tmem168|101118|transmembrane protein 168	AK152957|Tmem168|101118|transmembrane protein 168	AK034589|Tmem168|101118|transmembrane protein 168	AK170302|Tmem168|101118|transmembrane protein 168	AK018471|Tmem168|101118|transmembrane protein 168	AK051532|Tmem168|101118|transmembrane protein 168	NM_028990|Tmem168|101118|transmembrane protein 168
mm9_v1_chr14_-_9498752_9498831	0.102691	FOXD3.p2	AK016701|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	BC064468|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	AK019627|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	AK050783|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	AK133893|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	NM_028934|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	AK047451|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene
mm9_v1_chr10_+_119664096_119664177	0.10251	FOXD3.p2	AK004503|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	NM_025431|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	BC024098|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	BC096681|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	BC106103|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	AK007375|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	AK158700|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)
mm9_v1_chr5_+_77380762_77380839	0.101886	FOXD3.p2	AK002669|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK079282|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK166264|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK013426|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK075949|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK010462|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	BC018153|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm9_v1_chr14_-_103379725_103379759	0.101671	FOXD3.p2	AK086988|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK032276|Kctd12|239217|potassium channel tetramerisation domain containing 12
mm9_v1_chr2_-_28477437_28477507	0.101564	FOXD3.p2	BC132365|Gfi1b|14582|growth factor independent 1B	BC132367|Gfi1b|14582|growth factor independent 1B	BC145238|Gfi1b|14582|growth factor independent 1B	AF017275|Gfi1b|14582|growth factor independent 1B	BC052654|Gfi1b|14582|growth factor independent 1B	NM_001160406|Gfi1b|14582|growth factor independent 1B	NM_008114|Gfi1b|14582|growth factor independent 1B	AK157262|Gfi1b|14582|growth factor independent 1B
mm9_v1_chr13_+_23673433_23673471	0.101429	FOXD3.p2	NM_175654|Hist1h4d|319156|histone cluster 1, H4d	BC119611|Hist1h4d|319156|histone cluster 1, H4d
mm9_v1_chr18_+_53335981_53336033	0.101379	FOXD3.p2	AK005470|Snx2|67804|sorting nexin 2	AK002692|Snx2|67804|sorting nexin 2	BC006960|Snx2|67804|sorting nexin 2	NM_026386|Snx2|67804|sorting nexin 2	AK010572|Snx2|67804|sorting nexin 2	AK075929|Snx2|67804|sorting nexin 2	AK153525|Snx2|67804|sorting nexin 2	CT010229|Snx2|67804|sorting nexin 2
mm9_v1_chr10_+_41239248_41239438	0.101371	FOXD3.p2	AK145131|Cd164|53599|CD164 antigen	AK169275|Cd164|53599|CD164 antigen	AB028895|Cd164|53599|CD164 antigen	NM_016898|Cd164|53599|CD164 antigen	AK018009|Cd164|53599|CD164 antigen	BC005414|Cd164|53599|CD164 antigen	AB014464|Cd164|53599|CD164 antigen	AF299345|Cd164|53599|CD164 antigen	AK194033|Cd164|53599|CD164 antigen
mm9_v1_chr17_-_87665228_87665308	0.101145	FOXD3.p2	AK077139|Mcfd2|193813|multiple coagulation factor deficiency 2	AK141599|Mcfd2|193813|multiple coagulation factor deficiency 2	AF475283|Mcfd2|193813|multiple coagulation factor deficiency 2	AK151803|Mcfd2|193813|multiple coagulation factor deficiency 2	NM_139295|Mcfd2|193813|multiple coagulation factor deficiency 2	NM_176808|Mcfd2|193813|multiple coagulation factor deficiency 2
mm9_v1_chr2_-_125331769_125331823	0.101145	FOXD3.p2	AK046621|Fbn1|14118|fibrillin 1
mm9_v1_chr19_+_10257363_10257524	0.101128	FOXD3.p2	NM_146094|Fads1|76267|fatty acid desaturase 1	BC026831|Fads1|76267|fatty acid desaturase 1	AK154367|Fads1|76267|fatty acid desaturase 1	BC022139|Fads1|76267|fatty acid desaturase 1	BC026848|Fads1|76267|fatty acid desaturase 1	AB072976|Fads1|76267|fatty acid desaturase 1	AK080706|Fads1|76267|fatty acid desaturase 1	AF061504|Fads1|76267|fatty acid desaturase 1	AK083959|Fads1|76267|fatty acid desaturase 1	BC063053|Fads1|76267|fatty acid desaturase 1
mm9_v1_chr5_+_144578694_144578848	0.101086	FOXD3.p2	AK014775|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK156492|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK158437|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	BC111035|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK173160|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK020887|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1
mm9_v1_chr16_-_97391923_97391986	0.101033	FOXD3.p2	AF315558|Dscam|13508|Down syndrome cell adhesion molecule
mm9_v1_chr10_-_43621485_43621487	0.101018	FOXD3.p2	AK170225|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
mm9_v1_chr2_+_128955435_128955560	0.100568	FOXD3.p2	NM_025395|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	AK003341|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	BC096668|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	AK003936|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	BC094414|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	AK013018|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5
mm9_v1_chr2_+_120393393_120393485	0.100379	FOXD3.p2	AK019162|Snap23|20619|synaptosomal-associated protein 23	NM_001177792|Snap23|20619|synaptosomal-associated protein 23	NM_001177793|Snap23|20619|synaptosomal-associated protein 23	NM_009222|Snap23|20619|synaptosomal-associated protein 23	AK171763|Snap23|20619|synaptosomal-associated protein 23	AK017311|Snap23|20619|synaptosomal-associated protein 23	BC070456|Snap23|20619|synaptosomal-associated protein 23	AB007444|Snap23|20619|synaptosomal-associated protein 23
mm9_v1_chr17_-_32421603_32421681	0.09985	FOXD3.p2	BC103773|Brd4|57261|bromodomain containing 4	AK042431|Brd4|57261|bromodomain containing 4	BC013666|Brd4|57261|bromodomain containing 4	AK154514|Brd4|57261|bromodomain containing 4
mm9_v1_chr5_+_101227737_101227799	0.0996878	FOXD3.p2	AK145935|Mrps18c|68735|mitochondrial ribosomal protein S18C	AK004139|Mrps18c|68735|mitochondrial ribosomal protein S18C	AK088290|Mrps18c|68735|mitochondrial ribosomal protein S18C	BC028442|Mrps18c|68735|mitochondrial ribosomal protein S18C	NM_026826|Mrps18c|68735|mitochondrial ribosomal protein S18C
mm9_v1_chr1_-_172145521_172145534	0.0993005	FOXD3.p2	BC058732|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	NM_010633|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	AK013347|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr6_+_133985988_133986050	0.0991929	FOXD3.p2	AK078773|Etv6|14011|ets variant gene 6 (TEL oncogene)	AK035231|Etv6|14011|ets variant gene 6 (TEL oncogene)	BC052163|Etv6|14011|ets variant gene 6 (TEL oncogene)	AK157265|Etv6|14011|ets variant gene 6 (TEL oncogene)
mm9_v1_chr10_+_19076344_19076344	0.0991044	FOXD3.p2	NM_053008|Olig3|94222|oligodendrocyte transcription factor 3
mm9_v1_chr18_-_34911152_34911201	0.0990771	FOXD3.p2	U15562|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	L16926|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK168287|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK141737|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	NM_009860|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AF347115|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)
mm9_v1_chr19_+_41986360_41986656	0.0989224	FOXD3.p2	NM_023418|Pgam1|18648|phosphoglycerate mutase 1	BC002241|Pgam1|18648|phosphoglycerate mutase 1	BC106139|Pgam1|18648|phosphoglycerate mutase 1	BC005661|Pgam1|18648|phosphoglycerate mutase 1	AF283667|Pgam1|18648|phosphoglycerate mutase 1	AK004921|Pgam1|18648|phosphoglycerate mutase 1	AK009905|Pgam1|18648|phosphoglycerate mutase 1	AK144681|Pgam1|18648|phosphoglycerate mutase 1	AK153202|Pgam1|18648|phosphoglycerate mutase 1	AK159305|Pgam1|18648|phosphoglycerate mutase 1	AK150716|Pgam1|18648|phosphoglycerate mutase 1	AK152443|Pgam1|18648|phosphoglycerate mutase 1	AK165410|Pgam1|18648|phosphoglycerate mutase 1	AK168949|Pgam1|18648|phosphoglycerate mutase 1	BC083090|Pgam1|18648|phosphoglycerate mutase 1	BC066844|Pgam1|18648|phosphoglycerate mutase 1
mm9_v1_chr13_-_98976043_98976393	0.098852	FOXD3.p2	BC138030|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC075734|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC098331|Rgnef|110596|Rho-guanine nucleotide exchange factor	NM_012026|Rgnef|110596|Rho-guanine nucleotide exchange factor	U73199|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC022978|Rgnef|110596|Rho-guanine nucleotide exchange factor	AK173325|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr16_+_43890014_43890036	0.0987769	FOXD3.p2	NM_027801|2610015P09Rik|212153|RIKEN cDNA 2610015P09 gene
mm9_v1_chr14_-_78274701_78274767	0.0985869	FOXD3.p2	AK007806|Dnajc15|66148|DnaJ (Hsp40) homolog, subfamily C, member 15	AK007833|Dnajc15|66148|DnaJ (Hsp40) homolog, subfamily C, member 15	AK002598|Dnajc15|66148|DnaJ (Hsp40) homolog, subfamily C, member 15	BC027509|Dnajc15|66148|DnaJ (Hsp40) homolog, subfamily C, member 15	NM_025384|Dnajc15|66148|DnaJ (Hsp40) homolog, subfamily C, member 15	AK003396|Dnajc15|66148|DnaJ (Hsp40) homolog, subfamily C, member 15
mm9_v1_chr6_+_135313010_135313048	0.0984611	FOXD3.p2	AK158369|Emp1|13730|epithelial membrane protein 1	AK159752|Emp1|13730|epithelial membrane protein 1	AK171061|Emp1|13730|epithelial membrane protein 1	AK172607|Emp1|13730|epithelial membrane protein 1	AK157366|Emp1|13730|epithelial membrane protein 1	AK171675|Emp1|13730|epithelial membrane protein 1	AK172705|Emp1|13730|epithelial membrane protein 1	BC034257|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr11_-_51414445_51414449	0.0981608	FOXD3.p2	
mm9_v1_chr4_+_124743933_124743973	0.0980962	FOXD3.p2	AK010794|Snip1|76793|Smad nuclear interacting protein 1	AK040571|Snip1|76793|Smad nuclear interacting protein 1	AK049254|Snip1|76793|Smad nuclear interacting protein 1	AK049318|Snip1|76793|Smad nuclear interacting protein 1	AK143801|Snip1|76793|Smad nuclear interacting protein 1	NM_175246|Snip1|76793|Smad nuclear interacting protein 1	AK078163|Snip1|76793|Smad nuclear interacting protein 1	AK132768|Snip1|76793|Smad nuclear interacting protein 1	BC064067|Snip1|76793|Smad nuclear interacting protein 1
mm9_v1_chr7_+_118172447_118172534	0.0980255	FOXD3.p2	NM_009431|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK040331|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC024749|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK083921|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK045101|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK040205|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC080719|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC060091|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK148536|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC010344|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC053910|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	L49502|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr15_+_101904294_101904371	0.0978594	FOXD3.p2	BC147746|Eif4b|75705|eukaryotic translation initiation factor 4B	BC147748|Eif4b|75705|eukaryotic translation initiation factor 4B	AK077423|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170256|Eif4b|75705|eukaryotic translation initiation factor 4B	AK148012|Eif4b|75705|eukaryotic translation initiation factor 4B	AK163266|Eif4b|75705|eukaryotic translation initiation factor 4B	AK166363|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168425|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168350|Eif4b|75705|eukaryotic translation initiation factor 4B	AK045250|Eif4b|75705|eukaryotic translation initiation factor 4B	BC036293|Eif4b|75705|eukaryotic translation initiation factor 4B	AK161693|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170354|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr16_+_17331463_17331501	0.0974949	FOXD3.p2	NM_008223|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr2_+_118860522_118860609	0.097321	FOXD3.p2	AK041787|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK044767|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	BC117827|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	BC117828|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	NM_173450|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK043340|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK014804|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK035752|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2	AK035800|Rpusd2|271842|RNA pseudouridylate synthase domain containing 2
mm9_v1_chr11_+_49016828_49017024	0.097222	FOXD3.p2	AK088060|Zfp62|22720|zinc finger protein 62	AK157730|Zfp62|22720|zinc finger protein 62	AK167091|Zfp62|22720|zinc finger protein 62	AK028351|Zfp62|22720|zinc finger protein 62	AK048619|Zfp62|22720|zinc finger protein 62	NM_001024846|Zfp62|22720|zinc finger protein 62	NM_009562|Zfp62|22720|zinc finger protein 62	AK154767|Zfp62|22720|zinc finger protein 62	AK079774|Zfp62|22720|zinc finger protein 62	AK165654|Zfp62|22720|zinc finger protein 62
mm9_v1_chr9_-_106150060_106150202	0.0970131	FOXD3.p2	AK133283|Alas1|11655|aminolevulinic acid synthase 1	BC022110|Alas1|11655|aminolevulinic acid synthase 1
mm9_v1_chr11_+_60351469_60351612	0.0968476	FOXD3.p2	AK053695|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK049130|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK169700|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	BC052076|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK053700|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK162072|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK163294|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)
mm9_v1_chrY_+_234230_234474	0.0967248	FOXD3.p2	AK047790|Kdm5d|20592|lysine (K)-specific demethylase 5D	NM_011419|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK141096|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK140971|Kdm5d|20592|lysine (K)-specific demethylase 5D	BC060077|Kdm5d|20592|lysine (K)-specific demethylase 5D	AF127244|Kdm5d|20592|lysine (K)-specific demethylase 5D	AB221607|Kdm5d|20592|lysine (K)-specific demethylase 5D	Z29652|Kdm5d|20592|lysine (K)-specific demethylase 5D
mm9_v1_chrX_-_50622974_50623027	0.0966807	FOXD3.p2	AK036417|Fam122b|78755|family with sequence similarity 122, member B	AK044896|Fam122b|78755|family with sequence similarity 122, member B	NM_001166365|Fam122b|78755|family with sequence similarity 122, member B	NM_001166583|Fam122b|78755|family with sequence similarity 122, member B	NM_030167|Fam122b|78755|family with sequence similarity 122, member B
mm9_v1_chr8_-_13200534_13200625	0.096513	FOXD3.p2	AK017251|Grtp1|66790|GH regulated TBC protein 1	AK017197|Grtp1|66790|GH regulated TBC protein 1	AK044437|Grtp1|66790|GH regulated TBC protein 1	AK082863|Grtp1|66790|GH regulated TBC protein 1	AK149322|Grtp1|66790|GH regulated TBC protein 1	NM_025768|Grtp1|66790|GH regulated TBC protein 1	AK007905|Grtp1|66790|GH regulated TBC protein 1
mm9_v1_chrX_-_72823561_72823573	0.0965099	FOXD3.p2	BC050853|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chr16_+_44347501_44347594	0.0963851	FOXD3.p2	NM_144550|Spice1|212514|spindle and centriole associated protein 1	AK165031|Spice1|212514|spindle and centriole associated protein 1	BC052381|Spice1|212514|spindle and centriole associated protein 1	BC056960|Spice1|212514|spindle and centriole associated protein 1	AK048789|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr3_+_95733163_95733182	0.0963313	FOXD3.p2	AK172146|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	NM_023210|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr2_-_44965603_44965763	0.0962808	FOXD3.p2	AK012377|Zeb2|24136|zinc finger E-box binding homeobox 2	AF033116|Zeb2|24136|zinc finger E-box binding homeobox 2	AK141157|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr10_-_70700764_70701027	0.0961981	FOXD3.p2	U57939|Tfam|21780|transcription factor A, mitochondrial	AK004857|Tfam|21780|transcription factor A, mitochondrial	BC001987|Tfam|21780|transcription factor A, mitochondrial	BC083084|Tfam|21780|transcription factor A, mitochondrial	AK050446|Tfam|21780|transcription factor A, mitochondrial	AK167348|Tfam|21780|transcription factor A, mitochondrial	NM_009360|Tfam|21780|transcription factor A, mitochondrial	AK163563|Tfam|21780|transcription factor A, mitochondrial	AK017974|Tfam|21780|transcription factor A, mitochondrial	AK161747|Tfam|21780|transcription factor A, mitochondrial	AK167777|Tfam|21780|transcription factor A, mitochondrial	AK169808|Tfam|21780|transcription factor A, mitochondrial	U63859|Tfam|21780|transcription factor A, mitochondrial	U63858|Tfam|21780|transcription factor A, mitochondrial	U63712|Tfam|21780|transcription factor A, mitochondrial
mm9_v1_chr9_-_53475563_53475590	0.096102	FOXD3.p2	BC019661|Cul5|75717|cullin 5	AK046030|Cul5|75717|cullin 5
mm9_v1_chr3_+_51028368_51028391	0.0958193	FOXD3.p2	AK087790|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	NM_009834|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AF183960|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AK149340|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)
mm9_v1_chrX_+_99314793_99314850	0.0956718	FOXD3.p2	BC119355|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC119357|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_027181|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK010338|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
mm9_v1_chr3_+_121747377_121747377	0.0956183	FOXD3.p2	AF000149|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	BC057853|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	NM_007378|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4
mm9_v1_chr8_-_90886051_90886133	0.0955151	FOXD3.p2	AF084259|Brd7|26992|bromodomain containing 7	AK142758|Brd7|26992|bromodomain containing 7	NM_012047|Brd7|26992|bromodomain containing 7	AK138934|Brd7|26992|bromodomain containing 7
mm9_v1_chr3_+_89586320_89586446	0.0953932	FOXD3.p2	AK211403|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr2_-_167515255_167515321	0.095389	FOXD3.p2	AK080983|Tmem189|407243|transmembrane protein 189
mm9_v1_chr15_+_82176434_82176522	0.0953266	FOXD3.p2	AK151325|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	AK152795|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	BC028457|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	NM_026914|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	AK005345|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	AK170899|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	BC092006|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene
mm9_v1_chr5_-_122286761_122286840	0.0951662	FOXD3.p2	BC006759|Sh2b3|16923|SH2B adaptor protein 3	NM_008507|Sh2b3|16923|SH2B adaptor protein 3	AK157297|Sh2b3|16923|SH2B adaptor protein 3	AK172551|Sh2b3|16923|SH2B adaptor protein 3	AK172573|Sh2b3|16923|SH2B adaptor protein 3	AK156499|Sh2b3|16923|SH2B adaptor protein 3
mm9_v1_chr13_+_21454688_21454753	0.0951136	FOXD3.p2	AK129138|Zscan12|22758|zinc finger and SCAN domain containing 12	NM_016684|Zscan12|22758|zinc finger and SCAN domain containing 12	AK075886|Zscan12|22758|zinc finger and SCAN domain containing 12	AK139837|Zscan12|22758|zinc finger and SCAN domain containing 12	AK142005|Zscan12|22758|zinc finger and SCAN domain containing 12	BC027041|Zscan12|22758|zinc finger and SCAN domain containing 12
mm9_v1_chr4_+_8533630_8533662	0.0951071	FOXD3.p2	AK213817|Rab2a|59021|RAB2A, member RAS oncogene family	AK218701|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr4_-_21694265_21694282	0.0950301	FOXD3.p2	AK011611|2610029I01Rik|77032|RIKEN cDNA 2610029I01 gene
mm9_v1_chr17_-_35301810_35301835	0.094955	FOXD3.p2	NM_001199044|Prrc2a|53761|proline-rich coiled-coil 2A	NM_020027|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr8_-_96496001_96496082	0.094888	FOXD3.p2	AK197102|Amfr|23802|autocrine motility factor receptor
mm9_v1_chr7_-_17613079_17613266	0.0948618	FOXD3.p2	U12204|Ppp5c|19060|protein phosphatase 5, catalytic subunit	BC003744|Ppp5c|19060|protein phosphatase 5, catalytic subunit	AF018262|Ppp5c|19060|protein phosphatase 5, catalytic subunit	NM_011155|Ppp5c|19060|protein phosphatase 5, catalytic subunit
mm9_v1_chr10_+_80720251_80720289	0.0948151	FOXD3.p2	AK079816|Matk|17179|megakaryocyte-associated tyrosine kinase	U05210|Matk|17179|megakaryocyte-associated tyrosine kinase	L27738|Matk|17179|megakaryocyte-associated tyrosine kinase	NM_010768|Matk|17179|megakaryocyte-associated tyrosine kinase
mm9_v1_chr19_-_44144244_44144286	0.0947094	FOXD3.p2	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr10_-_44178474_44178587	0.0946533	FOXD3.p2	AK133503|Prdm1|12142|PR domain containing 1, with ZNF domain	BC129801|Prdm1|12142|PR domain containing 1, with ZNF domain	NM_007548|Prdm1|12142|PR domain containing 1, with ZNF domain	U08185|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr2_+_30271577_30271577	0.0945691	FOXD3.p2	AK150029|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr12_-_52849709_52849723	0.0945261	FOXD3.p2	AK077185|Hectd1|207304|HECT domain containing 1
mm9_v1_chr9_+_77961044_77961183	0.0944929	FOXD3.p2	NM_019987|Ick|56542|intestinal cell kinase	AK045950|Ick|56542|intestinal cell kinase	AK164613|Ick|56542|intestinal cell kinase	AK008991|Ick|56542|intestinal cell kinase	AK133537|Ick|56542|intestinal cell kinase	AK087484|Ick|56542|intestinal cell kinase
mm9_v1_chr11_+_34214821_34214821	0.0942206	FOXD3.p2	BC072605|Fam196b|574403|family with sequence similarity 196, member B	NM_001025382|Fam196b|574403|family with sequence similarity 196, member B
mm9_v1_chr4_+_132324212_132324345	0.0940392	FOXD3.p2	AK078006|Rpa2|19891|replication protein A2	AK169847|Rpa2|19891|replication protein A2	AK168680|Rpa2|19891|replication protein A2	NM_011284|Rpa2|19891|replication protein A2	BC004578|Rpa2|19891|replication protein A2	AK011530|Rpa2|19891|replication protein A2	D00812|Rpa2|19891|replication protein A2
mm9_v1_chr10_+_23614493_23614678	0.0938241	FOXD3.p2	NM_011704|Vnn1|22361|vanin 1	AK145984|Vnn1|22361|vanin 1	AK002773|Vnn1|22361|vanin 1	AK167427|Vnn1|22361|vanin 1	AJ132098|Vnn1|22361|vanin 1	BC019203|Vnn1|22361|vanin 1
mm9_v1_chr10_+_75052084_75052401	0.0937445	FOXD3.p2	AK140308|Ggt5|23887|gamma-glutamyltransferase 5	AK049084|Ggt5|23887|gamma-glutamyltransferase 5	AK052183|Ggt5|23887|gamma-glutamyltransferase 5	BC089585|Ggt5|23887|gamma-glutamyltransferase 5	NM_011820|Ggt5|23887|gamma-glutamyltransferase 5	AK085788|Ggt5|23887|gamma-glutamyltransferase 5	AF077765|Ggt5|23887|gamma-glutamyltransferase 5	AK170326|Ggt5|23887|gamma-glutamyltransferase 5	BC051971|Ggt5|23887|gamma-glutamyltransferase 5	BC113775|Ggt5|23887|gamma-glutamyltransferase 5
mm9_v1_chr5_-_118605455_118605474	0.093528	FOXD3.p2	AK031815|Fbxw8|231672|F-box and WD-40 domain protein 8	AK053794|Fbxw8|231672|F-box and WD-40 domain protein 8	NM_172721|Fbxw8|231672|F-box and WD-40 domain protein 8	AK134291|Fbxw8|231672|F-box and WD-40 domain protein 8
mm9_v1_chr11_+_101526871_101526892	0.0934604	FOXD3.p2	AK004126|Arl4d|80981|ADP-ribosylation factor-like 4D	AK013320|Arl4d|80981|ADP-ribosylation factor-like 4D	BC016113|Arl4d|80981|ADP-ribosylation factor-like 4D
mm9_v1_chrX_+_50265390_50265552	0.092993	FOXD3.p2	AK157045|Phf6|70998|PHD finger protein 6	AK012211|Phf6|70998|PHD finger protein 6	AK077803|Phf6|70998|PHD finger protein 6	AK163345|Phf6|70998|PHD finger protein 6	BC043127|Phf6|70998|PHD finger protein 6	NM_027642|Phf6|70998|PHD finger protein 6	AK141804|Phf6|70998|PHD finger protein 6	BC055330|Phf6|70998|PHD finger protein 6	AK122560|Phf6|70998|PHD finger protein 6	AK028498|Phf6|70998|PHD finger protein 6	AK038320|Phf6|70998|PHD finger protein 6	BC057374|Phf6|70998|PHD finger protein 6	AK192342|Phf6|70998|PHD finger protein 6	AK213676|Phf6|70998|PHD finger protein 6
mm9_v1_chr16_+_20141134_20141212	0.0927093	FOXD3.p2	NM_001033237|Yeats2|208146|YEATS domain containing 2	NM_001145930|Yeats2|208146|YEATS domain containing 2	NM_001145931|Yeats2|208146|YEATS domain containing 2	AK165933|Yeats2|208146|YEATS domain containing 2	AK160791|Yeats2|208146|YEATS domain containing 2
mm9_v1_chr12_-_71328615_71328621	0.0926841	FOXD3.p2	AK041189|Pygl|110095|liver glycogen phosphorylase	AK140321|Pygl|110095|liver glycogen phosphorylase
mm9_v1_chr5_-_130478687_130478765	0.0926827	FOXD3.p2	AK159564|Gusb|110006|glucuronidase, beta	AK041058|Gusb|110006|glucuronidase, beta	AK150048|Gusb|110006|glucuronidase, beta	AK151802|Gusb|110006|glucuronidase, beta	AK152206|Gusb|110006|glucuronidase, beta	AK159163|Gusb|110006|glucuronidase, beta	AK159526|Gusb|110006|glucuronidase, beta	AK159804|Gusb|110006|glucuronidase, beta	AK162436|Gusb|110006|glucuronidase, beta	J03047|Gusb|110006|glucuronidase, beta	M19279|Gusb|110006|glucuronidase, beta	M28540|Gusb|110006|glucuronidase, beta	M28541|Gusb|110006|glucuronidase, beta	M63836|Gusb|110006|glucuronidase, beta	NM_010368|Gusb|110006|glucuronidase, beta	BC071226|Gusb|110006|glucuronidase, beta	AK149814|Gusb|110006|glucuronidase, beta	AK076109|Gusb|110006|glucuronidase, beta	BC004616|Gusb|110006|glucuronidase, beta	AK002832|Gusb|110006|glucuronidase, beta	AK136519|Gusb|110006|glucuronidase, beta
mm9_v1_chr14_+_31292797_31292864	0.0924546	FOXD3.p2	BC066173|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK047460|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK171707|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr10_+_127485339_127485356	0.0923595	FOXD3.p2	
mm9_v1_chr2_+_181054406_181054528	0.0922476	FOXD3.p2	NM_001001882|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166665|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166666|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166667|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166668|Rtel1|269400|regulator of telomere elongation helicase 1	AK142225|Rtel1|269400|regulator of telomere elongation helicase 1	BC057352|Rtel1|269400|regulator of telomere elongation helicase 1	AK145145|Rtel1|269400|regulator of telomere elongation helicase 1	AK173097|Rtel1|269400|regulator of telomere elongation helicase 1	AY481619|Rtel1|269400|regulator of telomere elongation helicase 1	AY481620|Rtel1|269400|regulator of telomere elongation helicase 1	AY481621|Rtel1|269400|regulator of telomere elongation helicase 1	AY481622|Rtel1|269400|regulator of telomere elongation helicase 1	AY481623|Rtel1|269400|regulator of telomere elongation helicase 1	BC105578|Rtel1|269400|regulator of telomere elongation helicase 1
mm9_v1_chr6_+_38542722_38542769	0.0922417	FOXD3.p2	BC002314|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr18_+_78020559_78020576	0.0921536	FOXD3.p2	
mm9_v1_chr3_+_90318894_90318921	0.0918847	FOXD3.p2	X99921|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr7_+_120909680_120909687	0.0917869	FOXD3.p2	AK134774|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein	AK146506|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr4_+_41296028_41296100	0.0917249	FOXD3.p2	NM_023305|Ubap1|67123|ubiquitin-associated protein 1	AK009596|Ubap1|67123|ubiquitin-associated protein 1	AK076078|Ubap1|67123|ubiquitin-associated protein 1	AK028477|Ubap1|67123|ubiquitin-associated protein 1	AK163229|Ubap1|67123|ubiquitin-associated protein 1	AK033121|Ubap1|67123|ubiquitin-associated protein 1	AK028670|Ubap1|67123|ubiquitin-associated protein 1	BC065996|Ubap1|67123|ubiquitin-associated protein 1	AF275549|Ubap1|67123|ubiquitin-associated protein 1	AK030370|Ubap1|67123|ubiquitin-associated protein 1
mm9_v1_chr5_+_31543235_31543349	0.0913363	FOXD3.p2	AK077440|Nrbp1|192292|nuclear receptor binding protein 1	AK170501|Nrbp1|192292|nuclear receptor binding protein 1	AF302138|Nrbp1|192292|nuclear receptor binding protein 1	NM_147201|Nrbp1|192292|nuclear receptor binding protein 1	AK046142|Nrbp1|192292|nuclear receptor binding protein 1	BC018463|Nrbp1|192292|nuclear receptor binding protein 1	BC004756|Nrbp1|192292|nuclear receptor binding protein 1	AK191367|Nrbp1|192292|nuclear receptor binding protein 1
mm9_v1_chr7_-_51809255_51809350	0.091218	FOXD3.p2	AK134489|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	BC066025|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	NM_009473|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	AK077620|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	AK156777|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	AK054508|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2
mm9_v1_chr16_-_24090166_24090201	0.0911938	FOXD3.p2	
mm9_v1_chrX_+_103778524_103778524	0.090917	FOXD3.p2	AK044840|Gm5127|331493|predicted gene 5127	AK142438|Gm5127|331493|predicted gene 5127	NM_001033541|Gm5127|331493|predicted gene 5127
mm9_v1_chr3_+_156224757_156225137	0.0908595	FOXD3.p2	AK147253|Negr1|320840|neuronal growth regulator 1	NM_001039094|Negr1|320840|neuronal growth regulator 1	AK035218|Negr1|320840|neuronal growth regulator 1	NM_177274|Negr1|320840|neuronal growth regulator 1	AK030503|Negr1|320840|neuronal growth regulator 1	BC146005|Negr1|320840|neuronal growth regulator 1	BC146007|Negr1|320840|neuronal growth regulator 1	AK142298|Negr1|320840|neuronal growth regulator 1	AJ487032|Negr1|320840|neuronal growth regulator 1
mm9_v1_chr4_-_134323845_134323948	0.0905508	FOXD3.p2	BC021467|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK159800|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC066808|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC067411|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK167290|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK029008|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK148340|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	NM_145554|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1
mm9_v1_chr8_+_122434697_122434814	0.0904871	FOXD3.p2	AK077453|Usp10|22224|ubiquitin specific peptidase 10	AK157970|Usp10|22224|ubiquitin specific peptidase 10	AK165156|Usp10|22224|ubiquitin specific peptidase 10	AK172443|Usp10|22224|ubiquitin specific peptidase 10	AK137015|Usp10|22224|ubiquitin specific peptidase 10	AK166243|Usp10|22224|ubiquitin specific peptidase 10	AK129083|Usp10|22224|ubiquitin specific peptidase 10	BC007134|Usp10|22224|ubiquitin specific peptidase 10	D84096|Usp10|22224|ubiquitin specific peptidase 10	NM_009462|Usp10|22224|ubiquitin specific peptidase 10	AK179830|Usp10|22224|ubiquitin specific peptidase 10
mm9_v1_chr4_-_142718290_142718420	0.0904728	FOXD3.p2	AK136099|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr12_-_32893074_32893513	0.0901236	FOXD3.p2	BC051246|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137620|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146201|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AJ249280|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_020272|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137470|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK040543|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK132553|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146200|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide
mm9_v1_chr9_-_20703010_20703071	0.0900794	FOXD3.p2	U70733|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	BC008511|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	NM_016876|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	AF108214|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	AK168362|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	AK038249|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G
mm9_v1_chr5_+_145888588_145888809	0.0899247	FOXD3.p2	AK192837|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr15_-_54903657_54903709	0.0898447	FOXD3.p2	BC147638|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC151079|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK147903|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001081288|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr14_+_79851641_79851647	0.0898283	FOXD3.p2	AK159684|Gm5465|432879|predicted gene 5465	NM_001034882|Gm5465|432879|predicted gene 5465	AK163295|Gm5465|432879|predicted gene 5465
mm9_v1_chr3_+_90145575_90145575	0.0898231	FOXD3.p2	AF411837|Gatad2b|229542|GATA zinc finger domain containing 2B	BC130262|Gatad2b|229542|GATA zinc finger domain containing 2B	NM_139304|Gatad2b|229542|GATA zinc finger domain containing 2B
mm9_v1_chr8_-_73421336_73421350	0.0897722	FOXD3.p2	NM_029751|Rpl18a|76808|ribosomal protein L18A
mm9_v1_chr3_+_60276971_60277044	0.0897709	FOXD3.p2	AK153827|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr13_+_97158248_97158334	0.0897181	FOXD3.p2	AK150656|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	NM_026173|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK012926|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC037631|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC027118|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK089013|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK004769|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC016527|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr13_+_54167169_54167276	0.089675	FOXD3.p2	AK012650|Sfxn1|14057|sideroflexin 1	NM_027324|Sfxn1|14057|sideroflexin 1	AF325260|Sfxn1|14057|sideroflexin 1	BC005743|Sfxn1|14057|sideroflexin 1	AK151110|Sfxn1|14057|sideroflexin 1
mm9_v1_chr11_+_115265054_115265195	0.0896401	FOXD3.p2	BC028523|Ict1|68572|immature colon carcinoma transcript 1	BC079614|Ict1|68572|immature colon carcinoma transcript 1	AK003192|Ict1|68572|immature colon carcinoma transcript 1	NM_026729|Ict1|68572|immature colon carcinoma transcript 1	AK003286|Ict1|68572|immature colon carcinoma transcript 1
mm9_v1_chr13_+_118009379_118009441	0.0896027	FOXD3.p2	NM_010330|Emb|13723|embigin	AK138271|Emb|13723|embigin	AK079570|Emb|13723|embigin
mm9_v1_chr4_+_71862277_71862381	0.089286	FOXD3.p2	AK041409|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK043880|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK053841|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK083963|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK039121|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK012513|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK083285|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK042990|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene
mm9_v1_chr3_+_84756090_84756352	0.088982	FOXD3.p2	AF391192|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_080428|Fbxw7|50754|F-box and WD-40 domain protein 7	AF427101|Fbxw7|50754|F-box and WD-40 domain protein 7	BC131648|Fbxw7|50754|F-box and WD-40 domain protein 7	AB221593|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr5_+_119214502_119214629	0.0889736	FOXD3.p2	AK018557|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr6_+_117867280_117867570	0.0887509	FOXD3.p2	NM_001166427|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	AK076478|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC018185|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC089313|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	AK188037|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	AK196656|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr4_-_119088052_119088125	0.088672	FOXD3.p2	AK078362|Ccdc30|73332|coiled-coil domain containing 30	BC114436|Ccdc30|73332|coiled-coil domain containing 30	AK163185|Ccdc30|73332|coiled-coil domain containing 30	AK225009|Ccdc30|73332|coiled-coil domain containing 30	AK005616|Ccdc30|73332|coiled-coil domain containing 30	AK148014|Ccdc30|73332|coiled-coil domain containing 30	AK225018|Ccdc30|73332|coiled-coil domain containing 30	AK079015|Ccdc30|73332|coiled-coil domain containing 30	NM_029286|Ccdc30|73332|coiled-coil domain containing 30
mm9_v1_chr3_+_135488617_135488753	0.08861	FOXD3.p2	AK085740|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135149|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135150|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr10_-_26093761_26093964	0.0883675	FOXD3.p2	BC085192|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr2_+_32484995_32485061	0.0882863	FOXD3.p2	NM_021515|Ak1|11636|adenylate kinase 1	AJ010109|Ak1|11636|adenylate kinase 1	BC054366|Ak1|11636|adenylate kinase 1
mm9_v1_chr4_+_155186568_155186886	0.0881634	FOXD3.p2	NM_207678|Ccnl2|56036|cyclin L2	AK007552|Ccnl2|56036|cyclin L2	BC132295|Ccnl2|56036|cyclin L2	AK048244|Ccnl2|56036|cyclin L2	AK156037|Ccnl2|56036|cyclin L2	AB041605|Ccnl2|56036|cyclin L2	AY337018|Ccnl2|56036|cyclin L2	AK169857|Ccnl2|56036|cyclin L2	BC023747|Ccnl2|56036|cyclin L2	AF211859|Ccnl2|56036|cyclin L2	AK044204|Ccnl2|56036|cyclin L2	AK008585|Ccnl2|56036|cyclin L2	AK138938|Ccnl2|56036|cyclin L2
mm9_v1_chr7_-_30945790_30945794	0.088105	FOXD3.p2	AK033366|8430406M14Rik|399592|RIKEN cDNA 8430406M14 gene
mm9_v1_chr2_-_91790504_91790533	0.0879834	FOXD3.p2	AK087503|Dgkz|104418|diacylglycerol kinase zeta	NM_001166597|Dgkz|104418|diacylglycerol kinase zeta
mm9_v1_chr11_+_58144207_58144291	0.0879363	FOXD3.p2	AK156171|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK159202|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK172333|Sh3bp5l|79566|SH3 binding domain protein 5 like	NM_001161338|Sh3bp5l|79566|SH3 binding domain protein 5 like	NM_024480|Sh3bp5l|79566|SH3 binding domain protein 5 like	BC094418|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK166491|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK144928|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK086088|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK150129|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK167203|Sh3bp5l|79566|SH3 binding domain protein 5 like
mm9_v1_chr6_+_37820779_37820898	0.0875646	FOXD3.p2	AK080890|Trim24|21848|tripartite motif-containing 24	NM_145076|Trim24|21848|tripartite motif-containing 24	S78219|Trim24|21848|tripartite motif-containing 24	S78221|Trim24|21848|tripartite motif-containing 24	AK084870|Trim24|21848|tripartite motif-containing 24	BC056959|Trim24|21848|tripartite motif-containing 24
mm9_v1_chr19_+_4192077_4192212	0.0872375	FOXD3.p2	AK151582|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK150344|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK152051|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK152585|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK090070|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK167538|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK159575|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	BC014828|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	U25809|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK167244|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK167880|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK167981|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	NM_031868|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK007932|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK152667|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK028392|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK153517|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK202833|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform
mm9_v1_chr7_+_24960063_24960104	0.0871222	FOXD3.p2	NM_001029933|Zfp114|232966|zinc finger protein 114	AK147817|Zfp114|232966|zinc finger protein 114	AF167317|Zfp114|232966|zinc finger protein 114	AK139475|Zfp114|232966|zinc finger protein 114
mm9_v1_chr10_+_97110043_97110069	0.0870277	FOXD3.p2	AK137179|Epyc|13516|epiphycan	D78274|Epyc|13516|epiphycan
mm9_v1_chr15_+_74551611_74551685	0.086946	FOXD3.p2	BC047266|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene	NM_198607|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chr11_+_19824417_19824473	0.0868791	FOXD3.p2	AK153700|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK036430|Spred2|114716|sprouty-related, EVH1 domain containing 2	NM_033523|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK157817|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr9_+_92502908_92503003	0.0867006	FOXD3.p2	AK218100|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr12_-_103196366_103196464	0.0866638	FOXD3.p2	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr12_-_82586058_82586128	0.0861303	FOXD3.p2	AK008486|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC005675|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK007450|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK007562|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK040003|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK082374|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK087666|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK088794|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_025461|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr7_+_138703863_138703894	0.0860003	FOXD3.p2	BC025089|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm9_v1_chr5_+_123678198_123678324	0.0859752	FOXD3.p2	NM_026000|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK011984|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK145487|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK168863|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK005216|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK011863|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	BC060245|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK168339|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK002280|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK010276|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	BC051930|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
mm9_v1_chr18_-_38498564_38498663	0.0859476	FOXD3.p2	BC014800|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AK084247|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AF160355|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AK080610|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AK166069|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AF088903|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	NM_011937|Gnpda1|26384|glucosamine-6-phosphate deaminase 1
mm9_v1_chr4_+_141000576_141000628	0.0858858	FOXD3.p2	NM_009541|Zbtb17|22642|zinc finger and BTB domain containing 17	U14556|Zbtb17|22642|zinc finger and BTB domain containing 17	AK051971|Zbtb17|22642|zinc finger and BTB domain containing 17	U22396|Zbtb17|22642|zinc finger and BTB domain containing 17	BC060055|Zbtb17|22642|zinc finger and BTB domain containing 17	AK134251|Zbtb17|22642|zinc finger and BTB domain containing 17
mm9_v1_chr5_-_122907002_122907003	0.0856685	FOXD3.p2	AK134659|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr5_+_65361309_65361366	0.0856251	FOXD3.p2	AM162548|Fam114a1|68303|family with sequence similarity 114, member A1	BC110359|Fam114a1|68303|family with sequence similarity 114, member A1	AK030360|Fam114a1|68303|family with sequence similarity 114, member A1	NM_026667|Fam114a1|68303|family with sequence similarity 114, member A1	AK014725|Fam114a1|68303|family with sequence similarity 114, member A1	BC027235|Fam114a1|68303|family with sequence similarity 114, member A1	AK020262|Fam114a1|68303|family with sequence similarity 114, member A1	AK007950|Fam114a1|68303|family with sequence similarity 114, member A1	AK017336|Fam114a1|68303|family with sequence similarity 114, member A1	BC089499|Fam114a1|68303|family with sequence similarity 114, member A1
mm9_v1_chr18_-_63851841_63852091	0.085625	FOXD3.p2	AF052660|Txnl1|53382|thioredoxin-like 1	AK144211|Txnl1|53382|thioredoxin-like 1	AK150326|Txnl1|53382|thioredoxin-like 1	AK168712|Txnl1|53382|thioredoxin-like 1	AK150887|Txnl1|53382|thioredoxin-like 1	AK152101|Txnl1|53382|thioredoxin-like 1	AK150983|Txnl1|53382|thioredoxin-like 1	AK167954|Txnl1|53382|thioredoxin-like 1	AK051698|Txnl1|53382|thioredoxin-like 1	AK029807|Txnl1|53382|thioredoxin-like 1	NM_016792|Txnl1|53382|thioredoxin-like 1	BC061123|Txnl1|53382|thioredoxin-like 1
mm9_v1_chr17_+_47027617_47027637	0.0856061	FOXD3.p2	AK132036|Tbcc|72726|tubulin-specific chaperone C	AK012950|Tbcc|72726|tubulin-specific chaperone C	BC019476|Tbcc|72726|tubulin-specific chaperone C	BC083164|Tbcc|72726|tubulin-specific chaperone C
mm9_v1_chr4_+_151413427_151413471	0.0853706	FOXD3.p2	AK047599|Nol9|74035|nucleolar protein 9	AK164493|Nol9|74035|nucleolar protein 9	NM_001159599|Nol9|74035|nucleolar protein 9	NM_028727|Nol9|74035|nucleolar protein 9	BC024877|Nol9|74035|nucleolar protein 9	AK172043|Nol9|74035|nucleolar protein 9	AK014568|Nol9|74035|nucleolar protein 9	AK050948|Nol9|74035|nucleolar protein 9	AK157956|Nol9|74035|nucleolar protein 9	BC125432|Nol9|74035|nucleolar protein 9	BC132099|Nol9|74035|nucleolar protein 9	AK157398|Nol9|74035|nucleolar protein 9	AK079935|Nol9|74035|nucleolar protein 9	AK046761|Nol9|74035|nucleolar protein 9	BC096599|Nol9|74035|nucleolar protein 9	AK042581|Nol9|74035|nucleolar protein 9	BC051109|Nol9|74035|nucleolar protein 9
mm9_v1_chr5_+_118426802_118426818	0.0851854	FOXD3.p2	AK048131|Fbxo21|231670|F-box protein 21	AK048542|Fbxo21|231670|F-box protein 21
mm9_v1_chr13_+_34056507_34056641	0.0851585	FOXD3.p2	NM_001163239|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	NM_001163241|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	NM_020282|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK008138|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK008465|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK010842|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK049781|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	BC027629|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2
mm9_v1_chr19_-_46114019_46114148	0.0849942	FOXD3.p2	NM_010697|Ldb1|16825|LIM domain binding 1	U69270|Ldb1|16825|LIM domain binding 1
mm9_v1_chr17_-_35018943_35019021	0.0849405	FOXD3.p2	M57891|C2|12263|complement component 2 (within H-2S)	BC011086|C2|12263|complement component 2 (within H-2S)
mm9_v1_chrX_+_12869324_12869430	0.0849203	FOXD3.p2	AK211517|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr3_-_135086338_135086446	0.0846667	FOXD3.p2	AK005184|Cisd2|67006|CDGSH iron sulfur domain 2	AK003486|Cisd2|67006|CDGSH iron sulfur domain 2	AK004257|Cisd2|67006|CDGSH iron sulfur domain 2	AK046746|Cisd2|67006|CDGSH iron sulfur domain 2	AK005301|Cisd2|67006|CDGSH iron sulfur domain 2	BC058279|Cisd2|67006|CDGSH iron sulfur domain 2	NM_025902|Cisd2|67006|CDGSH iron sulfur domain 2
mm9_v1_chr9_+_23027995_23028014	0.0846666	FOXD3.p2	AY263358|Bmper|73230|BMP-binding endothelial regulator	BC066153|Bmper|73230|BMP-binding endothelial regulator
mm9_v1_chr16_-_11137100_11137212	0.0845686	FOXD3.p2	AK218593|Zc3h7a|106205|zinc finger CCCH type containing 7 A
mm9_v1_chr2_-_63936044_63936094	0.0843288	FOXD3.p2	AF263913|Fign|60344|fidgetin	AK163474|Fign|60344|fidgetin	AK164536|Fign|60344|fidgetin	NM_021716|Fign|60344|fidgetin	AK143787|Fign|60344|fidgetin	BC059266|Fign|60344|fidgetin
mm9_v1_chr19_+_8692485_8692668	0.084214	FOXD3.p2	NM_008766|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	BC021647|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	U52842|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	AK035971|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6
mm9_v1_chr1_-_13579885_13579986	0.0841816	FOXD3.p2	AK168708|Tram1|72265|translocating chain-associating membrane protein 1	AK151240|Tram1|72265|translocating chain-associating membrane protein 1	AK152343|Tram1|72265|translocating chain-associating membrane protein 1	AK152991|Tram1|72265|translocating chain-associating membrane protein 1	AK150777|Tram1|72265|translocating chain-associating membrane protein 1	BC012401|Tram1|72265|translocating chain-associating membrane protein 1	AK145291|Tram1|72265|translocating chain-associating membrane protein 1	AK146207|Tram1|72265|translocating chain-associating membrane protein 1	AK088814|Tram1|72265|translocating chain-associating membrane protein 1	AK142658|Tram1|72265|translocating chain-associating membrane protein 1	AK155905|Tram1|72265|translocating chain-associating membrane protein 1	AK159203|Tram1|72265|translocating chain-associating membrane protein 1	AK159350|Tram1|72265|translocating chain-associating membrane protein 1	NM_028173|Tram1|72265|translocating chain-associating membrane protein 1	AK150551|Tram1|72265|translocating chain-associating membrane protein 1	AK151409|Tram1|72265|translocating chain-associating membrane protein 1	AK151664|Tram1|72265|translocating chain-associating membrane protein 1	AK152338|Tram1|72265|translocating chain-associating membrane protein 1	AK153379|Tram1|72265|translocating chain-associating membrane protein 1	AK028304|Tram1|72265|translocating chain-associating membrane protein 1	AK159878|Tram1|72265|translocating chain-associating membrane protein 1
mm9_v1_chr11_+_94812919_94812953	0.084125	FOXD3.p2	AK159300|Col1a1|12842|collagen, type I, alpha 1
mm9_v1_chr2_-_59963586_59963753	0.0841081	FOXD3.p2	BC150814|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK029386|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK134250|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK173180|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK030867|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr11_-_80191504_80191518	0.0840826	FOXD3.p2	BC044897|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK153246|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK078548|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	NM_027472|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene
mm9_v1_chr12_-_102267095_102267118	0.0840805	FOXD3.p2	AK137260|Ccdc88c|68339|coiled-coil domain containing 88C	AK002458|Ccdc88c|68339|coiled-coil domain containing 88C
mm9_v1_chrX_-_47988434_47988499	0.0840205	FOXD3.p2	AK030946|6720401G13Rik|103012|RIKEN cDNA 6720401G13 gene
mm9_v1_chr11_-_90252208_90252214	0.083793	FOXD3.p2	BC058705|Hlf|217082|hepatic leukemia factor
mm9_v1_chr1_-_184212846_184212944	0.0836522	FOXD3.p2	Y08460|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK149811|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK150908|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK163404|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK077257|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	NM_007853|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK002617|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AK165352|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	AF466376|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)	BC003751|Degs1|13244|degenerative spermatocyte homolog 1 (Drosophila)
mm9_v1_chr18_-_43552694_43552984	0.0836302	FOXD3.p2	BC023003|Dpysl3|22240|dihydropyrimidinase-like 3	NM_009468|Dpysl3|22240|dihydropyrimidinase-like 3	X87817|Dpysl3|22240|dihydropyrimidinase-like 3
mm9_v1_chr14_-_73109254_73109390	0.0833486	FOXD3.p2	AK154790|Fndc3a|319448|fibronectin type III domain containing 3A	AK172458|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr15_-_83082156_83082203	0.083315	FOXD3.p2	AK149186|A4galt|239559|alpha 1,4-galactosyltransferase	AK162529|A4galt|239559|alpha 1,4-galactosyltransferase	AY371179|A4galt|239559|alpha 1,4-galactosyltransferase	NM_001170954|A4galt|239559|alpha 1,4-galactosyltransferase	AK139833|A4galt|239559|alpha 1,4-galactosyltransferase	NM_001004150|A4galt|239559|alpha 1,4-galactosyltransferase
mm9_v1_chr9_-_107996781_107996821	0.0831412	FOXD3.p2	BC025494|Apeh|235606|acylpeptide hydrolase	BC005716|Apeh|235606|acylpeptide hydrolase	AK041271|Apeh|235606|acylpeptide hydrolase	AK149671|Apeh|235606|acylpeptide hydrolase	AK149713|Apeh|235606|acylpeptide hydrolase	NM_146226|Apeh|235606|acylpeptide hydrolase
mm9_v1_chr4_-_82151657_82151695	0.0830126	FOXD3.p2	AK148573|Nfib|18028|nuclear factor I/B	Y07687|Nfib|18028|nuclear factor I/B	AK047576|Nfib|18028|nuclear factor I/B
mm9_v1_chr13_-_60278558_60278627	0.0829594	FOXD3.p2	BC058628|Gas1|14451|growth arrest specific 1
mm9_v1_chr17_-_10512094_10512209	0.0829492	FOXD3.p2	BC053426|Qk|19317|quaking
mm9_v1_chr1_+_122498985_122498994	0.0826218	FOXD3.p2	AK140634|En1|13798|engrailed 1
mm9_v1_chr4_-_117564594_117564651	0.0825325	FOXD3.p2	BC031124|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK018638|Dph2|67728|DPH2 homolog (S. cerevisiae)	NM_026344|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK011199|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK051026|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK080747|Dph2|67728|DPH2 homolog (S. cerevisiae)	BC014746|Dph2|67728|DPH2 homolog (S. cerevisiae)
mm9_v1_chr1_-_93829376_93829378	0.0825113	FOXD3.p2	AK170461|Hdac4|208727|histone deacetylase 4
mm9_v1_chr7_-_16973112_16973224	0.0824941	FOXD3.p2	AK010313|Sae1|56459|SUMO1 activating enzyme subunit 1	AK090012|Sae1|56459|SUMO1 activating enzyme subunit 1	AK162789|Sae1|56459|SUMO1 activating enzyme subunit 1	AB024303|Sae1|56459|SUMO1 activating enzyme subunit 1	BC068164|Sae1|56459|SUMO1 activating enzyme subunit 1	NM_019748|Sae1|56459|SUMO1 activating enzyme subunit 1	AK087556|Sae1|56459|SUMO1 activating enzyme subunit 1	AK159672|Sae1|56459|SUMO1 activating enzyme subunit 1	AK011772|Sae1|56459|SUMO1 activating enzyme subunit 1	AK154139|Sae1|56459|SUMO1 activating enzyme subunit 1
mm9_v1_chr7_-_54175214_54175352	0.0823152	FOXD3.p2	AK185554|Tsg101|22088|tumor susceptibility gene 101	AK179695|Tsg101|22088|tumor susceptibility gene 101	AK014049|Tsg101|22088|tumor susceptibility gene 101	U52945|Tsg101|22088|tumor susceptibility gene 101	BC085308|Tsg101|22088|tumor susceptibility gene 101	AK146602|Tsg101|22088|tumor susceptibility gene 101	NM_021884|Tsg101|22088|tumor susceptibility gene 101	BC005424|Tsg101|22088|tumor susceptibility gene 101	AK146229|Tsg101|22088|tumor susceptibility gene 101	AK150369|Tsg101|22088|tumor susceptibility gene 101
mm9_v1_chr1_+_174628164_174628196	0.0821785	FOXD3.p2	AK050392|Crp|12944|C-reactive protein, pentraxin-related	NM_007768|Crp|12944|C-reactive protein, pentraxin-related	X17496|Crp|12944|C-reactive protein, pentraxin-related	AK088477|Crp|12944|C-reactive protein, pentraxin-related	BC011124|Crp|12944|C-reactive protein, pentraxin-related
mm9_v1_chr4_-_12015073_12015153	0.0821784	FOXD3.p2	AK017238|Tmem67|329795|transmembrane protein 67	AK039177|Tmem67|329795|transmembrane protein 67	AK042835|Tmem67|329795|transmembrane protein 67	AK133059|Tmem67|329795|transmembrane protein 67	AK045429|Tmem67|329795|transmembrane protein 67	NM_177861|Tmem67|329795|transmembrane protein 67	AK077246|Tmem67|329795|transmembrane protein 67
mm9_v1_chr9_+_44446796_44446798	0.0821327	FOXD3.p2	AK156303|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr5_-_110698902_110698941	0.0821249	FOXD3.p2	AK146216|Pgam5|72542|phosphoglycerate mutase family member 5	NM_001163538|Pgam5|72542|phosphoglycerate mutase family member 5	NM_028273|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr16_-_44016471_44016548	0.0820741	FOXD3.p2	BC037472|Gramd1c|207798|GRAM domain containing 1C	AK129016|Gramd1c|207798|GRAM domain containing 1C	AK035257|Gramd1c|207798|GRAM domain containing 1C	NM_153528|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chr6_+_42195977_42196020	0.0819882	FOXD3.p2	BC051507|Gstk1|76263|glutathione S-transferase kappa 1	BC038151|Gstk1|76263|glutathione S-transferase kappa 1	BC058163|Gstk1|76263|glutathione S-transferase kappa 1	AY279096|Gstk1|76263|glutathione S-transferase kappa 1
mm9_v1_chr17_+_47505827_47505888	0.081936	FOXD3.p2	NM_001146211|Mrps10|64657|mitochondrial ribosomal protein S10	NM_001146212|Mrps10|64657|mitochondrial ribosomal protein S10	AK142675|Mrps10|64657|mitochondrial ribosomal protein S10	AK004151|Mrps10|64657|mitochondrial ribosomal protein S10	BC038917|Mrps10|64657|mitochondrial ribosomal protein S10	BC096043|Mrps10|64657|mitochondrial ribosomal protein S10
mm9_v1_chr17_-_25981402_25981452	0.0819202	FOXD3.p2	AK142183|Rhot2|214952|ras homolog gene family, member T2	BC029777|Rhot2|214952|ras homolog gene family, member T2	BC034062|Rhot2|214952|ras homolog gene family, member T2
mm9_v1_chr11_-_115569814_115569935	0.081779	FOXD3.p2	AK155800|Grb2|14784|growth factor receptor bound protein 2	AK166142|Grb2|14784|growth factor receptor bound protein 2	AK148148|Grb2|14784|growth factor receptor bound protein 2	AK172002|Grb2|14784|growth factor receptor bound protein 2	BC052377|Grb2|14784|growth factor receptor bound protein 2	NM_008163|Grb2|14784|growth factor receptor bound protein 2
mm9_v1_chr16_+_43619057_43619100	0.0817694	FOXD3.p2	AK178854|Zbtb20|56490|zinc finger and BTB domain containing 20	AK013698|Zbtb20|56490|zinc finger and BTB domain containing 20	AK036125|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr14_+_75576599_75576717	0.081541	FOXD3.p2	AK088202|Lcp1|18826|lymphocyte cytosolic protein 1	U82610|Lcp1|18826|lymphocyte cytosolic protein 1	AK169728|Lcp1|18826|lymphocyte cytosolic protein 1	AK171751|Lcp1|18826|lymphocyte cytosolic protein 1	AK030996|Lcp1|18826|lymphocyte cytosolic protein 1	AK169972|Lcp1|18826|lymphocyte cytosolic protein 1	AK167261|Lcp1|18826|lymphocyte cytosolic protein 1	AK153061|Lcp1|18826|lymphocyte cytosolic protein 1	AK153082|Lcp1|18826|lymphocyte cytosolic protein 1	AK151542|Lcp1|18826|lymphocyte cytosolic protein 1	AK089922|Lcp1|18826|lymphocyte cytosolic protein 1	AK151720|Lcp1|18826|lymphocyte cytosolic protein 1	AK152668|Lcp1|18826|lymphocyte cytosolic protein 1	AK152891|Lcp1|18826|lymphocyte cytosolic protein 1	AK152902|Lcp1|18826|lymphocyte cytosolic protein 1	AK168062|Lcp1|18826|lymphocyte cytosolic protein 1	AK153206|Lcp1|18826|lymphocyte cytosolic protein 1	AK169833|Lcp1|18826|lymphocyte cytosolic protein 1	AK030806|Lcp1|18826|lymphocyte cytosolic protein 1	AK151155|Lcp1|18826|lymphocyte cytosolic protein 1
mm9_v1_chr2_-_59720568_59720662	0.0815031	FOXD3.p2	AK178836|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	AK011391|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	BC050792|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	BC061948|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	NM_001159636|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	NM_028118|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1
mm9_v1_chr9_-_82826139_82826181	0.0812883	FOXD3.p2	BC068022|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr3_-_95622554_95622875	0.0811575	FOXD3.p2	AK129150|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK154692|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	BC067054|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK083674|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK087157|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK012860|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK015972|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	NM_001081293|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2
mm9_v1_chrX_+_13209894_13209986	0.0809642	FOXD3.p2	DQ103766|Gpr34|23890|G protein-coupled receptor 34	DQ103767|Gpr34|23890|G protein-coupled receptor 34	NM_011823|Gpr34|23890|G protein-coupled receptor 34	AK033675|Gpr34|23890|G protein-coupled receptor 34	AK039528|Gpr34|23890|G protein-coupled receptor 34	AK039041|Gpr34|23890|G protein-coupled receptor 34	AK140507|Gpr34|23890|G protein-coupled receptor 34
mm9_v1_chr18_+_89141181_89141199	0.0809187	FOXD3.p2	AF265232|Rttn|246102|rotatin	NM_175542|Rttn|246102|rotatin	AK083016|Rttn|246102|rotatin	AK141510|Rttn|246102|rotatin
mm9_v1_chr5_+_102910409_102910555	0.0808554	FOXD3.p2	AK080986|Arhgap24|231532|Rho GTPase activating protein 24	NM_029270|Arhgap24|231532|Rho GTPase activating protein 24	NM_146161|Arhgap24|231532|Rho GTPase activating protein 24	AK052395|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr8_+_97190597_97190763	0.0807946	FOXD3.p2	BC002131|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	NM_024191|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK149620|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK161325|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK018229|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	CT010168|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chrX_-_160396490_160396625	0.0805848	FOXD3.p2	BC083160|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	BC099617|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	BC065693|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	D45205|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	AK030296|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	AK045504|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	NM_009453|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	NM_178794|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
mm9_v1_chr13_+_103483611_103483765	0.0805483	FOXD3.p2	NM_008533|Cd180|17079|CD180 antigen	AK089613|Cd180|17079|CD180 antigen	AK089255|Cd180|17079|CD180 antigen	AK156548|Cd180|17079|CD180 antigen	D37797|Cd180|17079|CD180 antigen
mm9_v1_chr13_-_47138492_47138553	0.0805302	FOXD3.p2	AK002335|Tpmt|22017|thiopurine methyltransferase	AF037043|Tpmt|22017|thiopurine methyltransferase	AK019205|Tpmt|22017|thiopurine methyltransferase
mm9_v1_chr7_+_53039273_53039322	0.0804942	FOXD3.p2	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr10_+_87321789_87322010	0.0804069	FOXD3.p2	NM_001111275|Igf1|16000|insulin-like growth factor 1	NM_010512|Igf1|16000|insulin-like growth factor 1	AK050118|Igf1|16000|insulin-like growth factor 1	AK081019|Igf1|16000|insulin-like growth factor 1	AK165471|Igf1|16000|insulin-like growth factor 1	AY878192|Igf1|16000|insulin-like growth factor 1	AY878193|Igf1|16000|insulin-like growth factor 1	AK052033|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr17_+_45643768_45643817	0.0801198	FOXD3.p2	AK146958|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_198608|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC113172|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC113779|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	AK167771|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC079844|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr5_+_32761332_32761346	0.0800305	FOXD3.p2	NM_172707|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166416|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr18_-_3337505_3337586	0.0800053	FOXD3.p2	AK009841|Crem|12916|cAMP responsive element modulator	AK161366|Crem|12916|cAMP responsive element modulator	AK010806|Crem|12916|cAMP responsive element modulator	NM_001110850|Crem|12916|cAMP responsive element modulator	NM_001110851|Crem|12916|cAMP responsive element modulator	NM_001110852|Crem|12916|cAMP responsive element modulator	NM_001110856|Crem|12916|cAMP responsive element modulator	NM_001110857|Crem|12916|cAMP responsive element modulator	NM_001110858|Crem|12916|cAMP responsive element modulator	NM_001110859|Crem|12916|cAMP responsive element modulator	NM_013498|Crem|12916|cAMP responsive element modulator
mm9_v1_chr9_-_15105965_15105999	0.0799076	FOXD3.p2	BC016078|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	NM_133732|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chr17_+_23949101_23949124	0.0798725	FOXD3.p2	AK081577|Srrm2|75956|serine/arginine repetitive matrix 2
mm9_v1_chr19_+_20676453_20676504	0.0797156	FOXD3.p2	M74570|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC044729|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC054386|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	NM_013467|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC035322|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	S75713|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1
mm9_v1_chr7_-_24993103_24993167	0.0796186	FOXD3.p2	BC005456|Zfp111|56707|zinc finger protein 111	AK135436|Zfp111|56707|zinc finger protein 111	NM_019940|Zfp111|56707|zinc finger protein 111
mm9_v1_chr11_-_115560620_115560673	0.0795472	FOXD3.p2	D85748|Grb2|14784|growth factor receptor bound protein 2	U07617|Grb2|14784|growth factor receptor bound protein 2	AK170845|Grb2|14784|growth factor receptor bound protein 2
mm9_v1_chr18_-_85120825_85120843	0.0791828	FOXD3.p2	AK168105|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK013281|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene
mm9_v1_chr9_+_59526881_59526990	0.0790415	FOXD3.p2	AK187622|Pkm2|18746|pyruvate kinase, muscle	AK189986|Pkm2|18746|pyruvate kinase, muscle	AK191750|Pkm2|18746|pyruvate kinase, muscle	AK193178|Pkm2|18746|pyruvate kinase, muscle	AK194857|Pkm2|18746|pyruvate kinase, muscle	AK195839|Pkm2|18746|pyruvate kinase, muscle	AK196046|Pkm2|18746|pyruvate kinase, muscle	AK196682|Pkm2|18746|pyruvate kinase, muscle	AK198278|Pkm2|18746|pyruvate kinase, muscle	AK198346|Pkm2|18746|pyruvate kinase, muscle	AK198579|Pkm2|18746|pyruvate kinase, muscle	AK199500|Pkm2|18746|pyruvate kinase, muscle	AK200354|Pkm2|18746|pyruvate kinase, muscle	AK201799|Pkm2|18746|pyruvate kinase, muscle	AK204154|Pkm2|18746|pyruvate kinase, muscle	AK219384|Pkm2|18746|pyruvate kinase, muscle	AK197608|Pkm2|18746|pyruvate kinase, muscle
mm9_v1_chr5_+_122822549_122822598	0.0789369	FOXD3.p2	AK087968|Gpn3|68080|GPN-loop GTPase 3	AK080720|Gpn3|68080|GPN-loop GTPase 3	AK146783|Gpn3|68080|GPN-loop GTPase 3	AK016996|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr16_+_91677879_91677930	0.0789253	FOXD3.p2	BC029990|Son|20658|Son DNA binding protein
mm9_v1_chr9_+_77961211_77961215	0.0788943	FOXD3.p2	AF225918|Ick|56542|intestinal cell kinase
mm9_v1_chr5_+_113919352_113919613	0.0787794	FOXD3.p2	BC096526|Wscd2|320916|WSC domain containing 2	NM_177292|Wscd2|320916|WSC domain containing 2
mm9_v1_chr13_+_113717661_113718000	0.0785799	FOXD3.p2	AK087450|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK042497|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK042066|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK162443|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC020331|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC057112|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK049530|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC037686|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC082319|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC050229|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_172594|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29
mm9_v1_chr2_+_79475581_79475821	0.0785211	FOXD3.p2	AK169543|Ssfa2|70599|sperm specific antigen 2	NM_080558|Ssfa2|70599|sperm specific antigen 2	AB120565|Ssfa2|70599|sperm specific antigen 2	BC141883|Ssfa2|70599|sperm specific antigen 2	BC115799|Ssfa2|70599|sperm specific antigen 2	BC122519|Ssfa2|70599|sperm specific antigen 2	AB093303|Ssfa2|70599|sperm specific antigen 2
mm9_v1_chr1_-_89291303_89291307	0.0784253	FOXD3.p2	NM_001110227|Kcnj13|100040591|potassium inwardly-rectifying channel, subfamily J, member 13
mm9_v1_chr11_+_115676023_115676086	0.078425	FOXD3.p2	BC117762|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)	BC126953|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)	NM_029557|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)	AK002758|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)	AK089005|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)
mm9_v1_chr19_+_55816299_55816310	0.078373	FOXD3.p2	NM_001142918|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142919|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142920|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142921|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142922|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142923|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_009333|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	BC011397|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr7_+_27904968_27904975	0.0782607	FOXD3.p2	NM_007817|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr11_+_77161725_77161827	0.0782379	FOXD3.p2	AK158449|Ssh2|237860|slingshot homolog 2 (Drosophila)	AK170142|Ssh2|237860|slingshot homolog 2 (Drosophila)	AK155232|Ssh2|237860|slingshot homolog 2 (Drosophila)
mm9_v1_chr12_-_86715612_86715842	0.0780645	FOXD3.p2	AK150605|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152656|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC064755|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC085097|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK003676|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK084117|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152643|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	NM_026775|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr6_+_120413200_120413305	0.0779538	FOXD3.p2	NM_008359|Il17ra|16172|interleukin 17 receptor A	AK036587|Il17ra|16172|interleukin 17 receptor A	AK080226|Il17ra|16172|interleukin 17 receptor A
mm9_v1_chr10_-_100051871_100051900	0.0777311	FOXD3.p2	AK160693|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK036647|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK085292|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK077761|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK078231|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	NM_175128|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene
mm9_v1_chr1_+_161162285_161162568	0.0776315	FOXD3.p2	BC082804|Rfwd2|26374|ring finger and WD repeat domain 2	NM_011931|Rfwd2|26374|ring finger and WD repeat domain 2	BC051565|Rfwd2|26374|ring finger and WD repeat domain 2	BC158002|Rfwd2|26374|ring finger and WD repeat domain 2	AF151110|Rfwd2|26374|ring finger and WD repeat domain 2
mm9_v1_chr5_+_130555291_130555503	0.0775571	FOXD3.p2	AK150753|Tpst1|22021|protein-tyrosine sulfotransferase 1	NM_001130476|Tpst1|22021|protein-tyrosine sulfotransferase 1	BC012666|Tpst1|22021|protein-tyrosine sulfotransferase 1
mm9_v1_chr2_+_174276095_174276197	0.0775568	FOXD3.p2	BC147687|Tubb1|545486|tubulin, beta 1	BC147698|Tubb1|545486|tubulin, beta 1	NM_001080971|Tubb1|545486|tubulin, beta 1	BC147322|Tubb1|545486|tubulin, beta 1	BC147323|Tubb1|545486|tubulin, beta 1
mm9_v1_chrX_-_6765768_6765839	0.077328	FOXD3.p2	AK142227|Clcn5|12728|chloride channel 5	AK145763|Clcn5|12728|chloride channel 5	BC036347|Clcn5|12728|chloride channel 5	AK052990|Clcn5|12728|chloride channel 5	AF134117|Clcn5|12728|chloride channel 5	NM_016691|Clcn5|12728|chloride channel 5
mm9_v1_chr6_+_48634576_48634582	0.077313	FOXD3.p2	NM_174990|Gimap4|107526|GTPase, IMAP family member 4	NM_175048|Gimap4|107526|GTPase, IMAP family member 4	AK088228|Gimap4|107526|GTPase, IMAP family member 4
mm9_v1_chr7_-_138553991_138554026	0.077199	FOXD3.p2	BC048183|Ikzf5|67143|IKAROS family zinc finger 5	BC058537|Ikzf5|67143|IKAROS family zinc finger 5	NM_175115|Ikzf5|67143|IKAROS family zinc finger 5	AK153883|Ikzf5|67143|IKAROS family zinc finger 5	AK033716|Ikzf5|67143|IKAROS family zinc finger 5	BC089455|Ikzf5|67143|IKAROS family zinc finger 5	AK169384|Ikzf5|67143|IKAROS family zinc finger 5
mm9_v1_chr3_-_143867852_143867939	0.0771687	FOXD3.p2	AK080534|Lmo4|16911|LIM domain only 4	BC010278|Lmo4|16911|LIM domain only 4	AF096996|Lmo4|16911|LIM domain only 4
mm9_v1_chr1_+_138311847_138311988	0.0770484	FOXD3.p2	AK004833|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	NM_026500|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK013179|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK133731|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK076462|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	BC023840|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
mm9_v1_chrX_-_35988248_35988263	0.0769467	FOXD3.p2	AK005118|C1galt1c1|59048|C1GALT1-specific chaperone 1	AK161729|C1galt1c1|59048|C1GALT1-specific chaperone 1	AK008040|C1galt1c1|59048|C1GALT1-specific chaperone 1
mm9_v1_chr2_-_110203298_110203336	0.0768122	FOXD3.p2	AK011548|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK012026|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr1_-_74350713_74350779	0.0766901	FOXD3.p2	AK170625|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK077689|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK144110|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK171102|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK152864|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1
mm9_v1_chr16_+_37580303_37580398	0.0764489	FOXD3.p2	BC024369|Hgd|15233|homogentisate 1, 2-dioxygenase	BC037628|Hgd|15233|homogentisate 1, 2-dioxygenase	AK050193|Hgd|15233|homogentisate 1, 2-dioxygenase	BC044758|Hgd|15233|homogentisate 1, 2-dioxygenase	AK002584|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chr17_-_25023253_25023304	0.0762957	FOXD3.p2	AK169896|Nubp2|26426|nucleotide binding protein 2	AF114169|Nubp2|26426|nucleotide binding protein 2	BC012635|Nubp2|26426|nucleotide binding protein 2	AK003816|Nubp2|26426|nucleotide binding protein 2	NM_011956|Nubp2|26426|nucleotide binding protein 2
mm9_v1_chr14_-_46008425_46008617	0.0761278	FOXD3.p2	BC092047|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	BC031116|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK018499|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK050266|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AJ001006|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	NM_019425|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007722|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK167870|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK168074|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007647|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK008566|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK002466|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK028693|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007764|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK011098|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1
mm9_v1_chr5_-_144266956_144266980	0.076127	FOXD3.p2	
mm9_v1_chr4_+_155215979_155216047	0.076073	FOXD3.p2	AK182996|Mxra8|74761|matrix-remodelling associated 8
mm9_v1_chr15_-_77949709_77949709	0.0759857	FOXD3.p2	AF077739|Cacng2|12300|calcium channel, voltage-dependent, gamma subunit 2	NM_007583|Cacng2|12300|calcium channel, voltage-dependent, gamma subunit 2
mm9_v1_chrX_-_102265380_102265463	0.0759848	FOXD3.p2	AK153718|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC019699|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK017459|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085485|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085098|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084980|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC055463|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK080296|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK043766|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK047017|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084653|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK144934|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK157237|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK164650|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene
mm9_v1_chr9_+_122026424_122026492	0.0759249	FOXD3.p2	BC094658|Snrk|20623|SNF related kinase	BC020189|Snrk|20623|SNF related kinase
mm9_v1_chr15_+_12808445_12808493	0.0759143	FOXD3.p2	BC040801|Drosha|14000|drosha, ribonuclease type III
mm9_v1_chr15_-_98493302_98493343	0.075889	FOXD3.p2	AK014820|Ddx23|74351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	BC049928|Ddx23|74351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	NM_001080981|Ddx23|74351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK014272|Ddx23|74351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
mm9_v1_chr10_-_117147722_117147744	0.0756726	FOXD3.p2	X58876|Mdm2|17246|transformed mouse 3T3 cell double minute 2	BC050902|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK004881|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK088638|Mdm2|17246|transformed mouse 3T3 cell double minute 2
mm9_v1_chrX_-_46641408_46641425	0.0756188	FOXD3.p2	AK028343|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK034058|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK041822|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	NM_145951|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2
mm9_v1_chr18_-_47528483_47528523	0.0755464	FOXD3.p2	BC059238|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK042751|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	NM_018744|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK082711|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm9_v1_chr13_+_42396844_42396991	0.0752872	FOXD3.p2	BC029547|Edn1|13614|endothelin 1	AK040778|Edn1|13614|endothelin 1	AK153437|Edn1|13614|endothelin 1	AK152647|Edn1|13614|endothelin 1
mm9_v1_chr13_-_36826104_36826206	0.0752849	FOXD3.p2	AK003046|Nrn1|68404|neuritin 1
mm9_v1_chr16_-_55934909_55934966	0.0752345	FOXD3.p2	BC065773|Cep97|74201|centrosomal protein 97	AK079884|Cep97|74201|centrosomal protein 97	AK154885|Cep97|74201|centrosomal protein 97	AK012971|Cep97|74201|centrosomal protein 97	AK080249|Cep97|74201|centrosomal protein 97	BC067049|Cep97|74201|centrosomal protein 97	NM_001159364|Cep97|74201|centrosomal protein 97	NM_001159365|Cep97|74201|centrosomal protein 97	NM_001159366|Cep97|74201|centrosomal protein 97	NM_028815|Cep97|74201|centrosomal protein 97	AK040079|Cep97|74201|centrosomal protein 97
mm9_v1_chr3_-_8923789_8923856	0.0752252	FOXD3.p2	AK088314|Mrps28|66230|mitochondrial ribosomal protein S28	AK011036|Mrps28|66230|mitochondrial ribosomal protein S28	BC028530|Mrps28|66230|mitochondrial ribosomal protein S28	AK005229|Mrps28|66230|mitochondrial ribosomal protein S28	NM_025434|Mrps28|66230|mitochondrial ribosomal protein S28
mm9_v1_chr4_-_154010868_154010981	0.0752056	FOXD3.p2	AB078338|Prdm16|70673|PR domain containing 16	AK083829|Prdm16|70673|PR domain containing 16	BC053082|Prdm16|70673|PR domain containing 16	BC059838|Prdm16|70673|PR domain containing 16	NM_001177995|Prdm16|70673|PR domain containing 16	NM_027504|Prdm16|70673|PR domain containing 16
mm9_v1_chr10_-_60915251_60915468	0.0751981	FOXD3.p2	AK133912|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	BC119539|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	NM_010124|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	U75530|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr11_+_80196766_80196898	0.0750703	FOXD3.p2	AK087885|Zfp207|22680|zinc finger protein 207	NM_001130169|Zfp207|22680|zinc finger protein 207	NM_001130170|Zfp207|22680|zinc finger protein 207	NM_001130171|Zfp207|22680|zinc finger protein 207	NM_011751|Zfp207|22680|zinc finger protein 207	AK140139|Zfp207|22680|zinc finger protein 207	AK146787|Zfp207|22680|zinc finger protein 207	AK159683|Zfp207|22680|zinc finger protein 207	AK033497|Zfp207|22680|zinc finger protein 207	BC003715|Zfp207|22680|zinc finger protein 207	AB013357|Zfp207|22680|zinc finger protein 207	AB032196|Zfp207|22680|zinc finger protein 207
mm9_v1_chr3_-_10331334_10331440	0.0749939	FOXD3.p2	BC055722|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AF042730|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160467|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK083238|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK145472|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK011770|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160203|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK165977|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	BC049080|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK078406|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK152774|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK147778|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK153457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK168457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	NM_018864|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1
mm9_v1_chr10_+_7445867_7445883	0.0748864	FOXD3.p2	BC009136|Katna1|23924|katanin p60 (ATPase-containing) subunit A1
mm9_v1_chr4_-_132288428_132288460	0.0745553	FOXD3.p2	AK029920|Xkr8|381560|X Kell blood group precursor related family member 8 homolog	AY534254|Xkr8|381560|X Kell blood group precursor related family member 8 homolog	NM_201368|Xkr8|381560|X Kell blood group precursor related family member 8 homolog
mm9_v1_chr16_+_32247284_32247386	0.0745058	FOXD3.p2	NM_001185162|Wdr53|68980|WD repeat domain 53	NM_026898|Wdr53|68980|WD repeat domain 53	AK170771|Wdr53|68980|WD repeat domain 53	AK005105|Wdr53|68980|WD repeat domain 53
mm9_v1_chr5_-_89886732_89886828	0.074457	FOXD3.p2	M55413|Gc|14473|group specific component	AK010965|Gc|14473|group specific component	BC010762|Gc|14473|group specific component	BC051395|Gc|14473|group specific component	NM_008096|Gc|14473|group specific component
mm9_v1_chr5_-_22056086_22056211	0.0741743	FOXD3.p2	AK166537|Orc5|26429|origin recognition complex, subunit 5	AK169683|Orc5|26429|origin recognition complex, subunit 5	AJ007360|Orc5|26429|origin recognition complex, subunit 5	AK144983|Orc5|26429|origin recognition complex, subunit 5	NM_011959|Orc5|26429|origin recognition complex, subunit 5	AK165912|Orc5|26429|origin recognition complex, subunit 5	BC006927|Orc5|26429|origin recognition complex, subunit 5	AK084683|Orc5|26429|origin recognition complex, subunit 5
mm9_v1_chr8_+_87189015_87189026	0.0741714	FOXD3.p2	
mm9_v1_chr3_-_82853711_82853734	0.07417	FOXD3.p2	BC031715|Fgb|110135|fibrinogen beta chain	NM_181849|Fgb|110135|fibrinogen beta chain	AK168626|Fgb|110135|fibrinogen beta chain	AK011920|Fgb|110135|fibrinogen beta chain	AK011118|Fgb|110135|fibrinogen beta chain	AK146960|Fgb|110135|fibrinogen beta chain
mm9_v1_chr13_-_58228079_58228222	0.0741499	FOXD3.p2	AK004260|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr4_-_109125244_109125254	0.0738157	FOXD3.p2	AK139182|Rnf11|29864|ring finger protein 11
mm9_v1_chr6_-_116411041_116411195	0.0737957	FOXD3.p2	L42198|Alox5|11689|arachidonate 5-lipoxygenase	AK170016|Alox5|11689|arachidonate 5-lipoxygenase	BC139102|Alox5|11689|arachidonate 5-lipoxygenase	BC141213|Alox5|11689|arachidonate 5-lipoxygenase	AK171191|Alox5|11689|arachidonate 5-lipoxygenase	AK089344|Alox5|11689|arachidonate 5-lipoxygenase	AK137481|Alox5|11689|arachidonate 5-lipoxygenase	AK169938|Alox5|11689|arachidonate 5-lipoxygenase	AK170434|Alox5|11689|arachidonate 5-lipoxygenase	AK170879|Alox5|11689|arachidonate 5-lipoxygenase	AK171413|Alox5|11689|arachidonate 5-lipoxygenase	AK136868|Alox5|11689|arachidonate 5-lipoxygenase	NM_009662|Alox5|11689|arachidonate 5-lipoxygenase
mm9_v1_chr14_-_73762324_73762328	0.0736233	FOXD3.p2	AK010248|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr3_+_107081775_107081924	0.0735209	FOXD3.p2	NM_026774|Hbxip|68576|hepatitis B virus x interacting protein	AK146289|Hbxip|68576|hepatitis B virus x interacting protein
mm9_v1_chr14_-_62250728_62250729	0.0735153	FOXD3.p2	AK143097|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK162803|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK164623|Dleu2|668253|deleted in lymphocytic leukemia, 2
mm9_v1_chr17_+_35272145_35272203	0.0734897	FOXD3.p2	NM_057171|Bag6|224727|BCL2-associated athanogene 6	AK148796|Bag6|224727|BCL2-associated athanogene 6
mm9_v1_chr6_+_88043849_88043935	0.0734118	FOXD3.p2	AK217962|Rpn1|103963|ribophorin I
mm9_v1_chr6_-_23082901_23082994	0.0732205	FOXD3.p2	AK149400|Aass|30956|aminoadipate-semialdehyde synthase	AK098141|Aass|30956|aminoadipate-semialdehyde synthase	AK136216|Aass|30956|aminoadipate-semialdehyde synthase	BC005420|Aass|30956|aminoadipate-semialdehyde synthase	AK044323|Aass|30956|aminoadipate-semialdehyde synthase	NM_013930|Aass|30956|aminoadipate-semialdehyde synthase
mm9_v1_chr5_+_118426774_118426787	0.0731487	FOXD3.p2	AK049723|Fbxo21|231670|F-box protein 21	NM_145564|Fbxo21|231670|F-box protein 21	AK076521|Fbxo21|231670|F-box protein 21
mm9_v1_chr2_-_26092876_26092939	0.0730931	FOXD3.p2	AK157992|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK140324|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK165642|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	BC030934|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	NM_153559|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2
mm9_v1_chr8_-_85856284_85856386	0.0729765	FOXD3.p2	AK041137|Elmod2|244548|ELMO domain containing 2	AK165222|Elmod2|244548|ELMO domain containing 2	AK036746|Elmod2|244548|ELMO domain containing 2	BC079654|Elmod2|244548|ELMO domain containing 2	AK029044|Elmod2|244548|ELMO domain containing 2	AK036607|Elmod2|244548|ELMO domain containing 2	AK084950|Elmod2|244548|ELMO domain containing 2	NM_001170691|Elmod2|244548|ELMO domain containing 2	NM_178736|Elmod2|244548|ELMO domain containing 2
mm9_v1_chr18_+_34932278_34932429	0.0729732	FOXD3.p2	AK012724|Fam53c|66306|family with sequence similarity 53, member C	AK205811|Fam53c|66306|family with sequence similarity 53, member C
mm9_v1_chrX_-_106029678_106029693	0.0726727	FOXD3.p2	AK050539|Brwd3|382236|bromodomain and WD repeat domain containing 3	AK163354|Brwd3|382236|bromodomain and WD repeat domain containing 3	NM_001081477|Brwd3|382236|bromodomain and WD repeat domain containing 3
mm9_v1_chr5_-_72559220_72559438	0.0725606	FOXD3.p2	AK017777|Commd8|27784|COMM domain containing 8	AK013015|Commd8|27784|COMM domain containing 8	AK170011|Commd8|27784|COMM domain containing 8	AK013371|Commd8|27784|COMM domain containing 8	BC098183|Commd8|27784|COMM domain containing 8	AK158078|Commd8|27784|COMM domain containing 8	AK009275|Commd8|27784|COMM domain containing 8	AK151560|Commd8|27784|COMM domain containing 8	AK012653|Commd8|27784|COMM domain containing 8	AK077934|Commd8|27784|COMM domain containing 8	NM_178599|Commd8|27784|COMM domain containing 8
mm9_v1_chr4_-_61748264_61748345	0.072524	FOXD3.p2	EU882235|Mup3|17842|major urinary protein 3	M27608|Mup3|17842|major urinary protein 3	X03525|Mup3|17842|major urinary protein 3	BC019965|Mup3|17842|major urinary protein 3	BC106100|Mup3|17842|major urinary protein 3	BC059102|Mup3|17842|major urinary protein 3	NM_001039544|Mup3|17842|major urinary protein 3
mm9_v1_chr4_-_11181388_11181409	0.0724066	FOXD3.p2	AK140829|Ints8|72656|integrator complex subunit 8	NM_001159595|Ints8|72656|integrator complex subunit 8	NM_178112|Ints8|72656|integrator complex subunit 8
mm9_v1_chr2_-_34956162_34956206	0.0722361	FOXD3.p2	BC019541|AI182371|98870|expressed sequence AI182371	BC037995|AI182371|98870|expressed sequence AI182371	AK050413|AI182371|98870|expressed sequence AI182371	BC115979|AI182371|98870|expressed sequence AI182371	BC115986|AI182371|98870|expressed sequence AI182371	NM_178885|AI182371|98870|expressed sequence AI182371	BC094504|AI182371|98870|expressed sequence AI182371	AK050126|AI182371|98870|expressed sequence AI182371
mm9_v1_chr1_+_130140700_130141098	0.0721626	FOXD3.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr11_+_66838648_66838688	0.0720432	FOXD3.p2	AK043094|Tmem220|338369|transmembrane protein 220	BC110628|Tmem220|338369|transmembrane protein 220	BC110629|Tmem220|338369|transmembrane protein 220	NM_177392|Tmem220|338369|transmembrane protein 220	AK078505|Tmem220|338369|transmembrane protein 220
mm9_v1_chr4_-_6917964_6917984	0.072043	FOXD3.p2	AK169546|Tox|252838|thymocyte selection-associated high mobility group box
mm9_v1_chr5_+_142877419_142877473	0.0719765	FOXD3.p2	NM_199068|Foxk1|17425|forkhead box K1	AK147375|Foxk1|17425|forkhead box K1	L26507|Foxk1|17425|forkhead box K1	U95016|Foxk1|17425|forkhead box K1	BC060238|Foxk1|17425|forkhead box K1
mm9_v1_chr2_+_13504271_13504305	0.0718987	FOXD3.p2	
mm9_v1_chr2_+_44967779_44967818	0.0716219	FOXD3.p2	BC065800|Gm13476|433424|predicted gene 13476	NM_001177395|Gm13476|433424|predicted gene 13476
mm9_v1_chr9_-_56008819_56008825	0.0715526	FOXD3.p2	AK159418|Tspan3|56434|tetraspanin 3
mm9_v1_chr5_-_122804200_122804240	0.0715061	FOXD3.p2	AY297460|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	BC021784|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	NM_144912|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK081488|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK157179|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK042331|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK136504|Rad9b|231724|RAD9 homolog B (S. cerevisiae)
mm9_v1_chr3_-_92289795_92289819	0.0714511	FOXD3.p2	X91824|Sprr1a|20753|small proline-rich protein 1A	BC027534|Sprr1a|20753|small proline-rich protein 1A	NM_009264|Sprr1a|20753|small proline-rich protein 1A	AK144782|Sprr1a|20753|small proline-rich protein 1A
mm9_v1_chr6_+_38868942_38869113	0.0713601	FOXD3.p2	BC029014|Tbxas1|21391|thromboxane A synthase 1, platelet	NM_011539|Tbxas1|21391|thromboxane A synthase 1, platelet	AK048544|Tbxas1|21391|thromboxane A synthase 1, platelet	AK139479|Tbxas1|21391|thromboxane A synthase 1, platelet	L18868|Tbxas1|21391|thromboxane A synthase 1, platelet
mm9_v1_chr7_+_80520360_80520429	0.0713445	FOXD3.p2	AK082560|Rgma|244058|RGM domain family, member A	BC059072|Rgma|244058|RGM domain family, member A	NM_177740|Rgma|244058|RGM domain family, member A
mm9_v1_chr10_-_87937335_87937390	0.0713068	FOXD3.p2	AK080245|Chpt1|212862|choline phosphotransferase 1
mm9_v1_chr8_+_18595130_18595172	0.0712916	FOXD3.p2	AK083572|Mcph1|244329|microcephaly, primary autosomal recessive 1	AK138858|Mcph1|244329|microcephaly, primary autosomal recessive 1	AK042026|Mcph1|244329|microcephaly, primary autosomal recessive 1	BC056924|Mcph1|244329|microcephaly, primary autosomal recessive 1	NM_173189|Mcph1|244329|microcephaly, primary autosomal recessive 1
mm9_v1_chr18_-_60908058_60908102	0.0712673	FOXD3.p2	AK156504|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr19_-_7473566_7473625	0.0711698	FOXD3.p2	
mm9_v1_chr8_-_87368790_87368860	0.0711103	FOXD3.p2	
mm9_v1_chr9_-_56008770_56008818	0.0708154	FOXD3.p2	AK159914|Tspan3|56434|tetraspanin 3
mm9_v1_chr8_+_69384110_69384214	0.0707592	FOXD3.p2	NM_001163564|Naf1|234344|nuclear assembly factor 1 homolog (S. cerevisiae)
mm9_v1_chr3_-_57455592_57455609	0.070736	FOXD3.p2	BC062098|Commd2|52245|COMM domain containing 2	BC100390|Commd2|52245|COMM domain containing 2	BC080774|Commd2|52245|COMM domain containing 2	BC119316|Commd2|52245|COMM domain containing 2	BC119318|Commd2|52245|COMM domain containing 2	AK143821|Commd2|52245|COMM domain containing 2	NM_175095|Commd2|52245|COMM domain containing 2
mm9_v1_chr1_+_168309297_168309436	0.070717	FOXD3.p2	NM_030245|Tada1|27878|transcriptional adaptor 1	BC027337|Tada1|27878|transcriptional adaptor 1	AK151132|Tada1|27878|transcriptional adaptor 1
mm9_v1_chr19_+_6085096_6085130	0.070702	FOXD3.p2	NM_026410|Cdca5|67849|cell division cycle associated 5	AK011701|Cdca5|67849|cell division cycle associated 5	BC052904|Cdca5|67849|cell division cycle associated 5	AK010540|Cdca5|67849|cell division cycle associated 5
mm9_v1_chrX_-_67618136_67618224	0.0704276	FOXD3.p2	AK166178|Ids|15931|iduronate 2-sulfatase	AK166443|Ids|15931|iduronate 2-sulfatase
mm9_v1_chr13_-_120197722_120197851	0.0700331	FOXD3.p2	AK050478|Nnt|18115|nicotinamide nucleotide transhydrogenase	Z49204|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK052061|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK033282|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK040460|Nnt|18115|nicotinamide nucleotide transhydrogenase	BC008518|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK129006|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK084546|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK084604|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK087064|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK088044|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK159694|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK052234|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK054332|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK083413|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK085903|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK168736|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK090115|Nnt|18115|nicotinamide nucleotide transhydrogenase	NM_008710|Nnt|18115|nicotinamide nucleotide transhydrogenase
mm9_v1_chr11_-_86807216_86807263	0.0698221	FOXD3.p2	NM_001005341|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr9_+_114640266_114640368	0.0696272	FOXD3.p2	AK171394|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152723|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152817|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK012941|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK150775|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151431|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152448|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK153092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	NM_026036|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK170905|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159735|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167854|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK128960|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK154481|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167499|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK030885|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK145743|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	BC027248|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK165948|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159439|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6
mm9_v1_chr10_+_101621712_101621712	0.069611	FOXD3.p2	AK032009|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_001162369|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm9_v1_chr16_-_98072833_98072833	0.0695977	FOXD3.p2	NM_144789|Prdm15|114604|PR domain containing 15
mm9_v1_chr18_+_77304212_77304557	0.069578	FOXD3.p2	NM_001164168|Pias2|17344|protein inhibitor of activated STAT 2	NM_001164170|Pias2|17344|protein inhibitor of activated STAT 2	BC034711|Pias2|17344|protein inhibitor of activated STAT 2	BC005596|Pias2|17344|protein inhibitor of activated STAT 2
mm9_v1_chr6_+_49023793_49023864	0.0694186	FOXD3.p2	NM_029353|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK031878|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK153503|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK010366|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene
mm9_v1_chr6_-_127089169_127089223	0.0693715	FOXD3.p2	AK182883|Ccnd2|12444|cyclin D2
mm9_v1_chr2_+_35516774_35517011	0.0693347	FOXD3.p2	AY305656|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr5_-_92739036_92739049	0.069264	FOXD3.p2	AK029881|Sdad1|231452|SDA1 domain containing 1	NM_172713|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr13_-_4608352_4608430	0.0692082	FOXD3.p2	U68535|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK002507|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK007924|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK028605|Akr1e1|56043|aldo-keto reductase family 1, member E1	BC012692|Akr1e1|56043|aldo-keto reductase family 1, member E1	NM_018859|Akr1e1|56043|aldo-keto reductase family 1, member E1
mm9_v1_chr6_+_113573980_113574047	0.0690932	FOXD3.p2	AK159238|Vhl|22346|von Hippel-Lindau tumor suppressor	U12570|Vhl|22346|von Hippel-Lindau tumor suppressor	AK171604|Vhl|22346|von Hippel-Lindau tumor suppressor	AK171264|Vhl|22346|von Hippel-Lindau tumor suppressor	NM_009507|Vhl|22346|von Hippel-Lindau tumor suppressor	S76748|Vhl|22346|von Hippel-Lindau tumor suppressor	BC052417|Vhl|22346|von Hippel-Lindau tumor suppressor	AK161408|Vhl|22346|von Hippel-Lindau tumor suppressor
mm9_v1_chr2_-_114480618_114480699	0.0689418	FOXD3.p2	AK006965|Atpbd4|66632|ATP binding domain 4	AK017595|Atpbd4|66632|ATP binding domain 4	AK145789|Atpbd4|66632|ATP binding domain 4	AK033888|Atpbd4|66632|ATP binding domain 4	AK088160|Atpbd4|66632|ATP binding domain 4	NM_025675|Atpbd4|66632|ATP binding domain 4	AK007021|Atpbd4|66632|ATP binding domain 4	BC022995|Atpbd4|66632|ATP binding domain 4	AK036021|Atpbd4|66632|ATP binding domain 4	AK082013|Atpbd4|66632|ATP binding domain 4
mm9_v1_chr7_+_135888383_135888523	0.0689361	FOXD3.p2	NM_001029982|Sec23ip|207352|Sec23 interacting protein	AK048053|Sec23ip|207352|Sec23 interacting protein	BC098506|Sec23ip|207352|Sec23 interacting protein
mm9_v1_chr6_+_54987993_54988082	0.0687126	FOXD3.p2	NM_180678|Gars|353172|glycyl-tRNA synthetase	AK012758|Gars|353172|glycyl-tRNA synthetase	BC021747|Gars|353172|glycyl-tRNA synthetase	AK146238|Gars|353172|glycyl-tRNA synthetase	AK165857|Gars|353172|glycyl-tRNA synthetase
mm9_v1_chrX_-_99352341_99352429	0.0685497	FOXD3.p2	AK045113|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AK029015|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	BC037660|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AK084617|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AK084618|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AY172688|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	NM_146235|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like
mm9_v1_chr17_-_15635203_15635292	0.0683473	FOXD3.p2	AK077520|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	AK132161|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	NM_011185|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	BC018351|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	X80686|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	U60824|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	AK167647|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	AK028265|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1
mm9_v1_chr16_-_15863310_15863463	0.0682968	FOXD3.p2	BC027550|Mzt2|72083|mitotic spindle organizing protein 2	AK010544|Mzt2|72083|mitotic spindle organizing protein 2	NM_029354|Mzt2|72083|mitotic spindle organizing protein 2	AK011255|Mzt2|72083|mitotic spindle organizing protein 2
mm9_v1_chr8_-_110112352_110112366	0.0682229	FOXD3.p2	AK158379|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	BC130014|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	BC013513|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm9_v1_chr2_-_104582953_104582979	0.0681489	FOXD3.p2	BC013499|Depdc7|211896|DEP domain containing 7	NM_144804|Depdc7|211896|DEP domain containing 7	AK144066|Depdc7|211896|DEP domain containing 7	AK165504|Depdc7|211896|DEP domain containing 7	AK134830|Depdc7|211896|DEP domain containing 7	AK162086|Depdc7|211896|DEP domain containing 7	AK162218|Depdc7|211896|DEP domain containing 7
mm9_v1_chr19_-_42854402_42854474	0.0680178	FOXD3.p2	AK171225|Hps1|192236|Hermansky-Pudlak syndrome 1 homolog (human)	BC058332|Hps1|192236|Hermansky-Pudlak syndrome 1 homolog (human)	BC089331|Hps1|192236|Hermansky-Pudlak syndrome 1 homolog (human)	AK031397|Hps1|192236|Hermansky-Pudlak syndrome 1 homolog (human)	AK154994|Hps1|192236|Hermansky-Pudlak syndrome 1 homolog (human)	NM_019424|Hps1|192236|Hermansky-Pudlak syndrome 1 homolog (human)
mm9_v1_chr15_+_81494352_81494363	0.0680021	FOXD3.p2	AK146632|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr18_-_60907984_60908001	0.0679357	FOXD3.p2	AF520867|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr1_-_173177236_173177237	0.0678593	FOXD3.p2	AK150431|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	AK165426|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr7_+_31076771_31076772	0.0677416	FOXD3.p2	NM_001081114|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr6_-_131338465_131338473	0.0677112	FOXD3.p2	BC027785|Csda|56449|cold shock domain protein A	NM_011733|Csda|56449|cold shock domain protein A	NM_139117|Csda|56449|cold shock domain protein A
mm9_v1_chr4_-_43666412_43666469	0.0674525	FOXD3.p2	AK132968|Spag8|433700|sperm associated antigen 8	AY769082|Spag8|433700|sperm associated antigen 8	NM_001007463|Spag8|433700|sperm associated antigen 8	BC150868|Spag8|433700|sperm associated antigen 8
mm9_v1_chr19_+_39361574_39361600	0.0673873	FOXD3.p2	NM_007815|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29	BC019908|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29	D17674|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29
mm9_v1_chr10_-_80024245_80024324	0.0673872	FOXD3.p2	BC039623|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC011438|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC069964|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC054843|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC025511|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK173108|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK012127|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK087016|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC052424|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK144769|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	NM_025852|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)
mm9_v1_chr11_+_116295502_116295595	0.0673791	FOXD3.p2	AK050732|Fam100b|319370|family with sequence similarity 100, member B	BC119080|Fam100b|319370|family with sequence similarity 100, member B	BC116983|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr11_-_68200284_68200327	0.0673741	FOXD3.p2	NM_008744|Ntn1|18208|netrin 1
mm9_v1_chr11_-_100334035_100334069	0.0671618	FOXD3.p2	AK169910|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr16_+_20535519_20535657	0.0671552	FOXD3.p2	AK146517|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK168414|Ap2m1|11773|adaptor protein complex AP-2, mu1	NM_009679|Ap2m1|11773|adaptor protein complex AP-2, mu1	U27106|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK159534|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC056352|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK150358|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC089342|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC094510|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK143586|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK141862|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK172889|Ap2m1|11773|adaptor protein complex AP-2, mu1
mm9_v1_chr16_-_94591826_94592078	0.0670663	FOXD3.p2	AF216308|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC061117|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159619|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159620|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AF216307|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr5_+_93601062_93601210	0.0669536	FOXD3.p2	
mm9_v1_chr16_+_30599808_30599823	0.0667937	FOXD3.p2	AK083036|Fam43a|224093|family with sequence similarity 43, member A	NM_177632|Fam43a|224093|family with sequence similarity 43, member A	AK137950|Fam43a|224093|family with sequence similarity 43, member A	BC099947|Fam43a|224093|family with sequence similarity 43, member A
mm9_v1_chr18_-_64648604_64648678	0.0667697	FOXD3.p2	AK084843|Fech|14151|ferrochelatase	BC096770|Fech|14151|ferrochelatase
mm9_v1_chr9_+_82723410_82723412	0.0666934	FOXD3.p2	AK020170|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	NM_001168240|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	NM_022986|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr6_-_122287014_122287032	0.0666489	FOXD3.p2	U63386|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_001042623|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_007905|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chr5_+_115157787_115157882	0.066638	FOXD3.p2	NM_029992|Tchp|77832|trichoplein, keratin filament binding	AK020912|Tchp|77832|trichoplein, keratin filament binding	AK159947|Tchp|77832|trichoplein, keratin filament binding	AK083027|Tchp|77832|trichoplein, keratin filament binding	BC043048|Tchp|77832|trichoplein, keratin filament binding
mm9_v1_chr18_-_70689894_70689974	0.0665484	FOXD3.p2	AK145244|Poli|26447|polymerase (DNA directed), iota	AK154537|Poli|26447|polymerase (DNA directed), iota	BC057575|Poli|26447|polymerase (DNA directed), iota	AK163784|Poli|26447|polymerase (DNA directed), iota	AF151691|Poli|26447|polymerase (DNA directed), iota	NM_011972|Poli|26447|polymerase (DNA directed), iota
mm9_v1_chr14_+_120674976_120674983	0.0662221	FOXD3.p2	AK178232|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr8_+_124900494_124900538	0.0661961	FOXD3.p2	NM_001029993|Zc3h18|76014|zinc finger CCCH-type containing 18	NM_001029994|Zc3h18|76014|zinc finger CCCH-type containing 18
mm9_v1_chr11_+_62692956_62692968	0.0661792	FOXD3.p2	AK050027|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr10_-_36855668_36856157	0.0660705	FOXD3.p2	AK151646|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK153217|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr13_+_34094217_34094311	0.0658427	FOXD3.p2	AK156803|Ripk1|19766|receptor (TNFRSF)-interacting serine-threonine kinase 1	AK030959|Ripk1|19766|receptor (TNFRSF)-interacting serine-threonine kinase 1	AK048989|Ripk1|19766|receptor (TNFRSF)-interacting serine-threonine kinase 1	BC058162|Ripk1|19766|receptor (TNFRSF)-interacting serine-threonine kinase 1
mm9_v1_chr15_-_34372832_34373030	0.0654091	FOXD3.p2	BC092137|Rpl30|19946|ribosomal protein L30	BC069949|Rpl30|19946|ribosomal protein L30	BC086890|Rpl30|19946|ribosomal protein L30	AK002988|Rpl30|19946|ribosomal protein L30	AK137031|Rpl30|19946|ribosomal protein L30	BC086891|Rpl30|19946|ribosomal protein L30	BC100608|Rpl30|19946|ribosomal protein L30	NM_009083|Rpl30|19946|ribosomal protein L30	NM_001163485|Rpl30|19946|ribosomal protein L30
mm9_v1_chr14_-_32594734_32594785	0.0653287	FOXD3.p2	AK158845|3110068a07rik|73207|RIKEN cDNA 3110068A07 gene
mm9_v1_chr1_-_64663716_64663821	0.0653185	FOXD3.p2	AK033578|Fam119a|67099|family with sequence similarity 119, member A	NM_025964|Fam119a|67099|family with sequence similarity 119, member A	AK009673|Fam119a|67099|family with sequence similarity 119, member A	AK009675|Fam119a|67099|family with sequence similarity 119, member A	AK009678|Fam119a|67099|family with sequence similarity 119, member A	AK009679|Fam119a|67099|family with sequence similarity 119, member A	AK009680|Fam119a|67099|family with sequence similarity 119, member A	AK009682|Fam119a|67099|family with sequence similarity 119, member A	AK011433|Fam119a|67099|family with sequence similarity 119, member A
mm9_v1_chr5_-_123064483_123064536	0.065201	FOXD3.p2	BC055721|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK161375|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK013424|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AF354757|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	NM_009879|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	Y10495|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)
mm9_v1_chr9_-_58097569_58097598	0.0651439	FOXD3.p2	AK052305|Pml|18854|promyelocytic leukemia	AK054135|Pml|18854|promyelocytic leukemia	AK028044|Pml|18854|promyelocytic leukemia	NM_008884|Pml|18854|promyelocytic leukemia	NM_178087|Pml|18854|promyelocytic leukemia
mm9_v1_chr16_+_56477956_56478012	0.0651107	FOXD3.p2	AK086582|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014399|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014422|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014423|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014424|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_178790|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK041192|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK043879|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK051214|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC145388|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC150763|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190339|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190340|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190341|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190342|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190343|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein
mm9_v1_chr15_+_65703468_65703625	0.0650745	FOXD3.p2	AK039483|Efr3a|76740|EFR3 homolog A (S. cerevisiae)
mm9_v1_chr4_+_59639079_59639315	0.0650744	FOXD3.p2	AK047478|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	AK087509|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	NM_153158|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	AK047601|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	AK081604|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	NM_001015681|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	BC037070|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	BC017649|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene
mm9_v1_chr15_-_97536251_97536289	0.0650249	FOXD3.p2	AK009765|Rpap3|71919|RNA polymerase II associated protein 3	NM_028003|Rpap3|71919|RNA polymerase II associated protein 3	BC004046|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr2_-_163462584_163462669	0.0649435	FOXD3.p2	AK128955|Serinc3|26943|serine incorporator 3
mm9_v1_chr3_-_89824973_89824990	0.0649061	FOXD3.p2	AK208727|Ubap2l|74383|ubiquitin associated protein 2-like	AK218166|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr5_+_90890764_90890776	0.0648611	FOXD3.p2	AK050644|Alb|11657|albumin
mm9_v1_chr17_+_71533016_71533072	0.0648408	FOXD3.p2	AK086834|Lpin2|64898|lipin 2
mm9_v1_chr1_-_36301093_36301156	0.0646998	FOXD3.p2	BC062936|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	BC068283|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK050532|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	NM_198899|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr9_-_44226073_44226112	0.0645694	FOXD3.p2	BC096560|Ccdc84|382073|coiled-coil domain containing 84	BC055929|Ccdc84|382073|coiled-coil domain containing 84	NM_201372|Ccdc84|382073|coiled-coil domain containing 84	AK171754|Ccdc84|382073|coiled-coil domain containing 84	AK052757|Ccdc84|382073|coiled-coil domain containing 84	BC116877|Ccdc84|382073|coiled-coil domain containing 84	BC116879|Ccdc84|382073|coiled-coil domain containing 84	BC144712|Ccdc84|382073|coiled-coil domain containing 84	BC144713|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr9_+_120019498_120019516	0.0645632	FOXD3.p2	AK078385|Slc25a38|208638|solute carrier family 25, member 38	BC010801|Slc25a38|208638|solute carrier family 25, member 38	NM_144793|Slc25a38|208638|solute carrier family 25, member 38
mm9_v1_chr9_+_108698323_108698461	0.0645304	FOXD3.p2	BC039922|Ip6k2|76500|inositol hexaphosphate kinase 2	NM_029634|Ip6k2|76500|inositol hexaphosphate kinase 2	BC060059|Ip6k2|76500|inositol hexaphosphate kinase 2
mm9_v1_chr2_+_121332458_121332519	0.0645114	FOXD3.p2	NM_030234|Wdr76|241627|WD repeat domain 76	AK051037|Wdr76|241627|WD repeat domain 76	AK020004|Wdr76|241627|WD repeat domain 76	AK162181|Wdr76|241627|WD repeat domain 76	AK031592|Wdr76|241627|WD repeat domain 76	BC117821|Wdr76|241627|WD repeat domain 76	BC117822|Wdr76|241627|WD repeat domain 76
mm9_v1_chr11_-_83100174_83100227	0.0644154	FOXD3.p2	NM_001166028|Slfn14-ps|237890|schlafen family member 14, pseudogene
mm9_v1_chr18_-_78320014_78320074	0.0643228	FOXD3.p2	AK012066|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	AJ420967|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC058594|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC100570|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC086673|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	AK153891|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1
mm9_v1_chr15_+_81494375_81494386	0.064259	FOXD3.p2	AK145560|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237000|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237001|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237002|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr8_-_3467624_3467679	0.0642363	FOXD3.p2	BC062135|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	AK007848|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	AK007582|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	NM_026951|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	AK165461|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	BC024096|Pex11c|69129|peroxisomal biogenesis factor 11 gamma
mm9_v1_chr2_-_127618207_127618237	0.0640809	FOXD3.p2	AK165423|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	BC048556|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	AK008527|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	AK027942|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	BC116797|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	BC116799|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	AK005218|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene
mm9_v1_chr5_-_128097687_128097794	0.0640461	FOXD3.p2	BC016233|Slc15a4|100561|solute carrier family 15, member 4	NM_133895|Slc15a4|100561|solute carrier family 15, member 4	AY050630|Slc15a4|100561|solute carrier family 15, member 4	AK048529|Slc15a4|100561|solute carrier family 15, member 4	AK154238|Slc15a4|100561|solute carrier family 15, member 4
mm9_v1_chr18_+_10617756_10617866	0.0640414	FOXD3.p2	AK007674|Snrpd1|20641|small nuclear ribonucleoprotein D1	NM_009226|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK011455|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK134582|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK005517|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK135979|Snrpd1|20641|small nuclear ribonucleoprotein D1	BC024875|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK013075|Snrpd1|20641|small nuclear ribonucleoprotein D1	M58558|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK017788|Snrpd1|20641|small nuclear ribonucleoprotein D1
mm9_v1_chr15_+_44450689_44451235	0.0640249	FOXD3.p2	BC026717|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	AK160149|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	AK159499|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	AY009091|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	BC108397|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	NM_019480|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	BC119118|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	BC119120|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	BC144740|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9
mm9_v1_chr19_+_60887452_60887529	0.0639616	FOXD3.p2	NM_001167829|Fam45a|67894|family with sequence similarity 45, member A	NM_026437|Fam45a|67894|family with sequence similarity 45, member A	AK004643|Fam45a|67894|family with sequence similarity 45, member A	AK168474|Fam45a|67894|family with sequence similarity 45, member A	AK171767|Fam45a|67894|family with sequence similarity 45, member A	AK145769|Fam45a|67894|family with sequence similarity 45, member A	AK007867|Fam45a|67894|family with sequence similarity 45, member A	BC013514|Fam45a|67894|family with sequence similarity 45, member A	AK202624|Fam45a|67894|family with sequence similarity 45, member A
mm9_v1_chr16_+_17619441_17619473	0.0639143	FOXD3.p2	AK019466|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164609|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164610|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164611|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_029945|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031685|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031029|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036380|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK035892|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036055|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164234|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK129354|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK138720|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164456|Smpd4|77626|sphingomyelin phosphodiesterase 4	BC026767|Smpd4|77626|sphingomyelin phosphodiesterase 4
mm9_v1_chr5_-_33128264_33128313	0.0636666	FOXD3.p2	AK033483|Pisd|320951|phosphatidylserine decarboxylase	AK162028|Pisd|320951|phosphatidylserine decarboxylase	BC094594|Pisd|320951|phosphatidylserine decarboxylase	BC070408|Pisd|320951|phosphatidylserine decarboxylase	AK034656|Pisd|320951|phosphatidylserine decarboxylase	AK162737|Pisd|320951|phosphatidylserine decarboxylase	BC116695|Pisd|320951|phosphatidylserine decarboxylase	BC117509|Pisd|320951|phosphatidylserine decarboxylase	NM_177298|Pisd|320951|phosphatidylserine decarboxylase	AK167554|Pisd|320951|phosphatidylserine decarboxylase
mm9_v1_chr8_+_109127326_109127398	0.0636376	FOXD3.p2	X06115|Cdh1|12550|cadherin 1
mm9_v1_chr14_+_76906602_76906698	0.0635238	FOXD3.p2	AK186529|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr3_-_36512237_36512327	0.0634869	FOXD3.p2	AK132661|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	BC031505|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK050291|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AF521645|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK018389|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	NM_027810|Bbs7|71492|Bardet-Biedl syndrome 7 (human)
mm9_v1_chr4_+_134483092_134483164	0.0633777	FOXD3.p2	
mm9_v1_chr5_+_150921233_150921280	0.0633277	FOXD3.p2	AK157981|Fry|320365|furry homolog (Drosophila)
mm9_v1_chr7_-_90943328_90943348	0.0632511	FOXD3.p2	BC048079|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	AK006375|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	BC061016|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	NM_029335|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene
mm9_v1_chr8_+_74134884_74135109	0.0630615	FOXD3.p2	BC032165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK036165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	NM_146211|Glt25d1|234407|glycosyltransferase 25 domain containing 1	BC056951|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK035788|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK076103|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK029433|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK154775|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr1_+_74760129_74760147	0.0629608	FOXD3.p2	AK004977|Cyp27a1|104086|cytochrome P450, family 27, subfamily a, polypeptide 1	NM_024264|Cyp27a1|104086|cytochrome P450, family 27, subfamily a, polypeptide 1
mm9_v1_chr3_-_37024751_37024880	0.0626817	FOXD3.p2	U41504|Il2|16183|interleukin 2	DQ836354|Il2|16183|interleukin 2	U41494|Il2|16183|interleukin 2	U41505|Il2|16183|interleukin 2	U41506|Il2|16183|interleukin 2	AY147902|Il2|16183|interleukin 2	X66058|Il2|16183|interleukin 2	AF065914|Il2|16183|interleukin 2	AF065915|Il2|16183|interleukin 2	AF065916|Il2|16183|interleukin 2	BC116845|Il2|16183|interleukin 2	BC116873|Il2|16183|interleukin 2	X01772|Il2|16183|interleukin 2	X73040|Il2|16183|interleukin 2	K02292|Il2|16183|interleukin 2	NM_008366|Il2|16183|interleukin 2	AF538059|Il2|16183|interleukin 2	AF542383|Il2|16183|interleukin 2	AF542384|Il2|16183|interleukin 2	AF542385|Il2|16183|interleukin 2
mm9_v1_chr8_+_87561055_87561132	0.0625943	FOXD3.p2	NM_001122843|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	BC003275|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr8_-_61390372_61390423	0.0625618	FOXD3.p2	BC111102|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	AK080614|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	NM_175032|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm9_v1_chr1_+_12708582_12708625	0.0624678	FOXD3.p2	AK037389|Sulf1|240725|sulfatase 1	AY101178|Sulf1|240725|sulfatase 1	BC034547|Sulf1|240725|sulfatase 1	BC049276|Sulf1|240725|sulfatase 1	NM_172294|Sulf1|240725|sulfatase 1
mm9_v1_chr16_-_34514112_34514198	0.0624602	FOXD3.p2	BC157950|Kalrn|545156|kalirin, RhoGEF kinase	BC172101|Kalrn|545156|kalirin, RhoGEF kinase	NM_001164268|Kalrn|545156|kalirin, RhoGEF kinase	NM_177357|Kalrn|545156|kalirin, RhoGEF kinase	AK147314|Kalrn|545156|kalirin, RhoGEF kinase	AK147518|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr6_+_65621583_65621630	0.0624193	FOXD3.p2	AK049802|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	AK029210|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	NM_172399|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	BC047154|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene
mm9_v1_chr8_+_58773321_58773362	0.062342	FOXD3.p2	NM_008278|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)
mm9_v1_chr18_-_77870871_77870990	0.062338	FOXD3.p2	AK009215|2310007O11Rik|74177|RIKEN cDNA 2310007O11 gene
mm9_v1_chr1_+_171899520_171899582	0.0622482	FOXD3.p2	AK014177|3110045C21Rik|67303|RIKEN cDNA 3110045C21 gene	AK014032|3110045C21Rik|67303|RIKEN cDNA 3110045C21 gene
mm9_v1_chr19_-_44144175_44144240	0.0620998	FOXD3.p2	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr14_-_67487226_67487503	0.0620172	FOXD3.p2	Y10339|Dpysl2|12934|dihydropyrimidinase-like 2	X87242|Dpysl2|12934|dihydropyrimidinase-like 2	BC062955|Dpysl2|12934|dihydropyrimidinase-like 2	NM_009955|Dpysl2|12934|dihydropyrimidinase-like 2
mm9_v1_chr3_+_90318850_90318869	0.0619982	FOXD3.p2	AK002755|S100a13|20196|S100 calcium binding protein A13	AK008895|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr3_+_19857053_19857266	0.0619157	FOXD3.p2	BC062957|Cp|12870|ceruloplasmin	NM_001042611|Cp|12870|ceruloplasmin	NM_007752|Cp|12870|ceruloplasmin	DQ336396|Cp|12870|ceruloplasmin	AK014835|Cp|12870|ceruloplasmin	AK043248|Cp|12870|ceruloplasmin	U49430|Cp|12870|ceruloplasmin	AK149523|Cp|12870|ceruloplasmin
mm9_v1_chr17_+_45570766_45570813	0.0616686	FOXD3.p2	AK045689|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK046225|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK083460|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK171144|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK162357|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK140548|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene
mm9_v1_chr8_+_126755253_126755502	0.0615628	FOXD3.p2	NM_139272|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK046567|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	BC059818|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK149609|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK145122|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AF348968|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK151536|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm9_v1_chr17_-_43013320_43013409	0.0615588	FOXD3.p2	BC138374|Cd2ap|12488|CD2-associated protein	BC157901|Cd2ap|12488|CD2-associated protein	AK045218|Cd2ap|12488|CD2-associated protein	NM_009847|Cd2ap|12488|CD2-associated protein
mm9_v1_chr10_-_60294129_60294365	0.0614577	FOXD3.p2	BC048162|Unc5b|107449|unc-5 homolog B (C. elegans)	BC057560|Unc5b|107449|unc-5 homolog B (C. elegans)	AJ487853|Unc5b|107449|unc-5 homolog B (C. elegans)	AK170513|Unc5b|107449|unc-5 homolog B (C. elegans)	AK154287|Unc5b|107449|unc-5 homolog B (C. elegans)	AK158284|Unc5b|107449|unc-5 homolog B (C. elegans)	AK018177|Unc5b|107449|unc-5 homolog B (C. elegans)	AK154271|Unc5b|107449|unc-5 homolog B (C. elegans)	NM_029770|Unc5b|107449|unc-5 homolog B (C. elegans)
mm9_v1_chrX_+_135751704_135751704	0.0612862	FOXD3.p2	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr7_-_107475377_107475426	0.0612555	FOXD3.p2	
mm9_v1_chr14_+_44291397_44291537	0.0612309	FOXD3.p2	AK214325|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene
mm9_v1_chr3_+_137806778_137806871	0.0611734	FOXD3.p2	AK008262|2010015P12Rik|70189|RIKEN cDNA 2010015P12 gene
mm9_v1_chr5_-_122821971_122822010	0.0611441	FOXD3.p2	BC061033|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	NM_026883|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	BC057658|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene
mm9_v1_chr7_+_134380580_134380598	0.0607769	FOXD3.p2	AK218462|Zfp553|233887|zinc finger protein 553
mm9_v1_chr15_-_32174404_32174416	0.0606788	FOXD3.p2	AK002304|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chr11_-_43561446_43561512	0.0604458	FOXD3.p2	AK019021|Ttc1|66827|tetratricopeptide repeat domain 1	BC010236|Ttc1|66827|tetratricopeptide repeat domain 1	NM_133795|Ttc1|66827|tetratricopeptide repeat domain 1	AK166431|Ttc1|66827|tetratricopeptide repeat domain 1	AK170032|Ttc1|66827|tetratricopeptide repeat domain 1	AK170230|Ttc1|66827|tetratricopeptide repeat domain 1	AK077715|Ttc1|66827|tetratricopeptide repeat domain 1
mm9_v1_chr10_+_79635688_79635690	0.0604237	FOXD3.p2	AK005397|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	AK168176|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	NM_027207|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	AK050606|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	BC146018|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	BC146020|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene
mm9_v1_chr2_+_70499545_70499765	0.0603567	FOXD3.p2	NM_027352|Gorasp2|70231|golgi reassembly stacking protein 2	AK033413|Gorasp2|70231|golgi reassembly stacking protein 2	AK077683|Gorasp2|70231|golgi reassembly stacking protein 2	AK148337|Gorasp2|70231|golgi reassembly stacking protein 2	AK153555|Gorasp2|70231|golgi reassembly stacking protein 2	AK167823|Gorasp2|70231|golgi reassembly stacking protein 2	AK168928|Gorasp2|70231|golgi reassembly stacking protein 2	AK159469|Gorasp2|70231|golgi reassembly stacking protein 2	AK010664|Gorasp2|70231|golgi reassembly stacking protein 2	AK152603|Gorasp2|70231|golgi reassembly stacking protein 2	BC024982|Gorasp2|70231|golgi reassembly stacking protein 2	AK002515|Gorasp2|70231|golgi reassembly stacking protein 2	AK044691|Gorasp2|70231|golgi reassembly stacking protein 2	AK088239|Gorasp2|70231|golgi reassembly stacking protein 2	AK151843|Gorasp2|70231|golgi reassembly stacking protein 2	AK152475|Gorasp2|70231|golgi reassembly stacking protein 2	AK152544|Gorasp2|70231|golgi reassembly stacking protein 2	AK153049|Gorasp2|70231|golgi reassembly stacking protein 2	AK169382|Gorasp2|70231|golgi reassembly stacking protein 2	AK077153|Gorasp2|70231|golgi reassembly stacking protein 2	BC005600|Gorasp2|70231|golgi reassembly stacking protein 2	AK077706|Gorasp2|70231|golgi reassembly stacking protein 2
mm9_v1_chr7_+_104100014_104100062	0.0602622	FOXD3.p2	AK046799|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK046801|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	NM_153591|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK138260|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
mm9_v1_chr2_-_94252368_94252477	0.060158	FOXD3.p2	AK212083|Api5|11800|apoptosis inhibitor 5
mm9_v1_chr2_+_158450623_158450686	0.0601422	FOXD3.p2	AK046312|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK142980|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	NM_175419|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK046584|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC028806|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC052039|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC037522|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)
mm9_v1_chr10_+_19890580_19890589	0.0601386	FOXD3.p2	AK138516|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene	AK138667|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene
mm9_v1_chr3_+_51299153_51299205	0.0600852	FOXD3.p2	
mm9_v1_chr16_-_85173930_85173941	0.0600512	FOXD3.p2	AK159718|App|11820|amyloid beta (A4) precursor protein	M18373|App|11820|amyloid beta (A4) precursor protein	U84012|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr11_+_120459840_120459845	0.0598685	FOXD3.p2	NM_001038230|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr7_+_138712015_138712162	0.0597381	FOXD3.p2	AK039977|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK079742|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm9_v1_chr15_+_102313591_102313671	0.0596919	FOXD3.p2	AK218290|Pcbp2|18521|poly(rC) binding protein 2	AK186166|Pcbp2|18521|poly(rC) binding protein 2
mm9_v1_chr19_-_57271875_57272120	0.0595847	FOXD3.p2	AF404775|Ablim1|226251|actin-binding LIM protein 1	AK143907|Ablim1|226251|actin-binding LIM protein 1	NM_001103177|Ablim1|226251|actin-binding LIM protein 1	AK122196|Ablim1|226251|actin-binding LIM protein 1
mm9_v1_chr14_-_55272452_55272539	0.0595799	FOXD3.p2	AF124725|Acin1|56215|apoptotic chromatin condensation inducer 1	AF124729|Acin1|56215|apoptotic chromatin condensation inducer 1	BC019127|Acin1|56215|apoptotic chromatin condensation inducer 1	BC094217|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_019567|Acin1|56215|apoptotic chromatin condensation inducer 1	AK012099|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_001085472|Acin1|56215|apoptotic chromatin condensation inducer 1
mm9_v1_chr14_+_25309968_25309977	0.0594823	FOXD3.p2	AK167874|Rps24|20088|ribosomal protein S24
mm9_v1_chr17_-_10512217_10512250	0.0594427	FOXD3.p2	AK132303|Qk|19317|quaking	NM_001159516|Qk|19317|quaking	NM_001159517|Qk|19317|quaking	NM_021881|Qk|19317|quaking	U44940|Qk|19317|quaking
mm9_v1_chr2_+_151368197_151368330	0.0592834	FOXD3.p2	NM_008019|Fkbp1a|14225|FK506 binding protein 1a	AK019362|Fkbp1a|14225|FK506 binding protein 1a	AK010693|Fkbp1a|14225|FK506 binding protein 1a	AK145400|Fkbp1a|14225|FK506 binding protein 1a	AK169242|Fkbp1a|14225|FK506 binding protein 1a	AK141261|Fkbp1a|14225|FK506 binding protein 1a	AK168333|Fkbp1a|14225|FK506 binding protein 1a
mm9_v1_chr5_+_23900197_23900242	0.0591916	FOXD3.p2	AK014688|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK076315|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK049152|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK166704|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK170334|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK014319|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK030624|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK038760|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm9_v1_chr19_+_56622750_56622913	0.0591791	FOXD3.p2	AK033384|Nhlrc2|66866|NHL repeat containing 2	NM_025811|Nhlrc2|66866|NHL repeat containing 2	BC095956|Nhlrc2|66866|NHL repeat containing 2	BC138190|Nhlrc2|66866|NHL repeat containing 2	BC138191|Nhlrc2|66866|NHL repeat containing 2
mm9_v1_chr7_+_3332984_3333089	0.0591045	FOXD3.p2	AK032173|Cacng7|81904|calcium channel, voltage-dependent, gamma subunit 7
mm9_v1_chr10_-_60609031_60609082	0.0590418	FOXD3.p2	CT010214|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr7_-_34977928_34978057	0.0588885	FOXD3.p2	BC025090|Pdcd2l|68079|programmed cell death 2-like	BC038524|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr5_-_5749270_5749396	0.0588518	FOXD3.p2	AK144312|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	AY029584|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	BC061023|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	AK010437|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	NM_027399|Steap1|70358|six transmembrane epithelial antigen of the prostate 1
mm9_v1_chr7_+_148645664_148645872	0.0587799	FOXD3.p2	BC026807|Pnpla2|66853|patatin-like phospholipase domain containing 2
mm9_v1_chr3_-_81779636_81779675	0.0587641	FOXD3.p2	U24493|Tdo2|56720|tryptophan 2,3-dioxygenase	BC018390|Tdo2|56720|tryptophan 2,3-dioxygenase	NM_019911|Tdo2|56720|tryptophan 2,3-dioxygenase	AK132271|Tdo2|56720|tryptophan 2,3-dioxygenase
mm9_v1_chr7_-_16807341_16807387	0.0586426	FOXD3.p2	BC080856|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK129062|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK004733|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	NM_027883|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm9_v1_chr7_+_17401610_17401709	0.0586326	FOXD3.p2	AK161673|Strn4|97387|striatin, calmodulin binding protein 4	BC080283|Strn4|97387|striatin, calmodulin binding protein 4	AK154615|Strn4|97387|striatin, calmodulin binding protein 4
mm9_v1_chr10_-_77472501_77472567	0.0585958	FOXD3.p2	NM_008826|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr2_-_93997994_93998073	0.0585701	FOXD3.p2	BC037620|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC090659|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC010749|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AF064635|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK076088|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK150849|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK152489|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK166027|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK081869|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK082715|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK088521|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK167908|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK078841|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	NM_019657|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12
mm9_v1_chr18_-_39572137_39572180	0.0583428	FOXD3.p2	AK171439|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	AK163857|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr5_-_17341534_17341556	0.0582091	FOXD3.p2	L23108|Cd36|12491|CD36 antigen	AK151355|Cd36|12491|CD36 antigen
mm9_v1_chrX_+_148436378_148436449	0.0581795	FOXD3.p2	AK088685|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	AF233685|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	BC027517|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	NM_016763|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	AK002368|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	AK013340|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	AK077735|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10
mm9_v1_chr11_-_110029368_110029491	0.0581423	FOXD3.p2	AK028451|Abca9|217262|ATP-binding cassette, sub-family A (ABC1), member 9	AK085555|Abca9|217262|ATP-binding cassette, sub-family A (ABC1), member 9	AF491299|Abca9|217262|ATP-binding cassette, sub-family A (ABC1), member 9	NM_147220|Abca9|217262|ATP-binding cassette, sub-family A (ABC1), member 9
mm9_v1_chr1_+_109407998_109408121	0.0580629	FOXD3.p2	AK081487|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_001174170|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_011111|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	AK090049|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm9_v1_chr14_+_120724163_120724175	0.0579984	FOXD3.p2	BC075665|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr3_-_89802501_89802651	0.0579454	FOXD3.p2	AF465243|Hax1|23897|HCLS1 associated X-1	BC006688|Hax1|23897|HCLS1 associated X-1	BC147481|Hax1|23897|HCLS1 associated X-1	BC098225|Hax1|23897|HCLS1 associated X-1	AK002256|Hax1|23897|HCLS1 associated X-1	AK135138|Hax1|23897|HCLS1 associated X-1	AF023482|Hax1|23897|HCLS1 associated X-1	AF023483|Hax1|23897|HCLS1 associated X-1	NM_011826|Hax1|23897|HCLS1 associated X-1	AK010633|Hax1|23897|HCLS1 associated X-1	AK088746|Hax1|23897|HCLS1 associated X-1
mm9_v1_chr5_+_87233239_87233314	0.0577188	FOXD3.p2	AK135309|Ythdc1|231386|YTH domain containing 1
mm9_v1_chr11_-_115884712_115884736	0.0575938	FOXD3.p2	AK213191|H3f3b|15081|H3 histone, family 3B
mm9_v1_chr19_+_45101318_45101473	0.0574774	FOXD3.p2	AK202462|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK203408|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK205448|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK210216|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215584|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215776|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK217660|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr2_-_62411970_62412077	0.0573636	FOXD3.p2	BC019190|Fap|14089|fibroblast activation protein	AK051959|Fap|14089|fibroblast activation protein	NM_007986|Fap|14089|fibroblast activation protein	Y10007|Fap|14089|fibroblast activation protein
mm9_v1_chr4_-_118954780_118955048	0.0572689	FOXD3.p2	AK213887|Ybx1|22608|Y box protein 1	AK208509|Ybx1|22608|Y box protein 1	AK212502|Ybx1|22608|Y box protein 1
mm9_v1_chr9_-_103267226_103267309	0.0571393	FOXD3.p2	AK172053|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	BC031362|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	NM_001134427|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	AK048941|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3
mm9_v1_chr6_+_136467315_136467378	0.0571171	FOXD3.p2	AK082697|Atf7ip|54343|activating transcription factor 7 interacting protein	AK167542|Atf7ip|54343|activating transcription factor 7 interacting protein	BC048827|Atf7ip|54343|activating transcription factor 7 interacting protein	AK134252|Atf7ip|54343|activating transcription factor 7 interacting protein	BC052460|Atf7ip|54343|activating transcription factor 7 interacting protein	NM_019426|Atf7ip|54343|activating transcription factor 7 interacting protein	AJ132702|Atf7ip|54343|activating transcription factor 7 interacting protein	BC022714|Atf7ip|54343|activating transcription factor 7 interacting protein
mm9_v1_chr6_-_128476708_128476738	0.057112	FOXD3.p2	M93264|Pzp|11287|pregnancy zone protein	NM_007376|Pzp|11287|pregnancy zone protein
mm9_v1_chr1_+_129101551_129101562	0.0568457	FOXD3.p2	NM_145128|Mgat5|107895|mannoside acetylglucosaminyltransferase 5
mm9_v1_chr11_+_96891270_96891328	0.056737	FOXD3.p2	AK075869|Scrn2|217140|secernin 2	BC021346|Scrn2|217140|secernin 2	BC010784|Scrn2|217140|secernin 2
mm9_v1_chr10_+_25079603_25079644	0.0567355	FOXD3.p2	AK144088|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr13_+_101421285_101421367	0.0567061	FOXD3.p2	NM_027139|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_027592|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC042723|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK012905|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC019453|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC108348|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr19_-_28754566_28754608	0.0566772	FOXD3.p2	AK054020|Glis3|226075|GLIS family zinc finger 3	DQ871027|Glis3|226075|GLIS family zinc finger 3	NM_175459|Glis3|226075|GLIS family zinc finger 3
mm9_v1_chr9_-_53475519_53475552	0.0566522	FOXD3.p2	BC075710|Cul5|75717|cullin 5
mm9_v1_chr9_+_46081146_46081375	0.0565106	FOXD3.p2	NM_011752|Zfp259|22687|zinc finger protein 259	AK158995|Zfp259|22687|zinc finger protein 259	AK170372|Zfp259|22687|zinc finger protein 259	AK044472|Zfp259|22687|zinc finger protein 259	AB041612|Zfp259|22687|zinc finger protein 259	BC021397|Zfp259|22687|zinc finger protein 259	AK167849|Zfp259|22687|zinc finger protein 259	AK168061|Zfp259|22687|zinc finger protein 259	AK215085|Zfp259|22687|zinc finger protein 259
mm9_v1_chr1_+_9788206_9788302	0.0562806	FOXD3.p2	NM_133220|Sgk3|170755|serum/glucocorticoid regulated kinase 3	NM_177547|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK143836|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK031133|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151793|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171120|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171186|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151867|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171678|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK172323|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK028722|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK039247|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK039427|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151181|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK166414|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151996|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AF312007|Sgk3|170755|serum/glucocorticoid regulated kinase 3
mm9_v1_chr3_+_63099408_63099509	0.056211	FOXD3.p2	AK076908|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr6_-_115758729_115758768	0.0559882	FOXD3.p2	BC046339|Rpl32|19951|ribosomal protein L32	BC030176|Rpl32|19951|ribosomal protein L32	AK002353|Rpl32|19951|ribosomal protein L32	AK011017|Rpl32|19951|ribosomal protein L32	AK012525|Rpl32|19951|ribosomal protein L32	AK028204|Rpl32|19951|ribosomal protein L32	AK146768|Rpl32|19951|ribosomal protein L32	AK148453|Rpl32|19951|ribosomal protein L32	AK150705|Rpl32|19951|ribosomal protein L32	AK168282|Rpl32|19951|ribosomal protein L32	NM_172086|Rpl32|19951|ribosomal protein L32	BC086909|Rpl32|19951|ribosomal protein L32
mm9_v1_chr1_-_95698320_95698458	0.0559458	FOXD3.p2	AK210481|Dtymk|21915|deoxythymidylate kinase	AK019284|Dtymk|21915|deoxythymidylate kinase	BC030178|Dtymk|21915|deoxythymidylate kinase	S82852|Dtymk|21915|deoxythymidylate kinase	S82853|Dtymk|21915|deoxythymidylate kinase	AK011955|Dtymk|21915|deoxythymidylate kinase
mm9_v1_chr1_+_59538966_59539075	0.0559221	FOXD3.p2	NM_008057|Fzd7|14369|frizzled homolog 7 (Drosophila)	BC063077|Fzd7|14369|frizzled homolog 7 (Drosophila)
mm9_v1_chr17_+_26389911_26389996	0.0559137	FOXD3.p2	BC055875|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	BC019194|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK211801|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr17_+_45700882_45700945	0.0557551	FOXD3.p2	AK155551|Slc35b2|73836|solute carrier family 35, member B2	AK144403|Slc35b2|73836|solute carrier family 35, member B2	AK003377|Slc35b2|73836|solute carrier family 35, member B2	AK090329|Slc35b2|73836|solute carrier family 35, member B2	AK152362|Slc35b2|73836|solute carrier family 35, member B2	BC025875|Slc35b2|73836|solute carrier family 35, member B2	BC036992|Slc35b2|73836|solute carrier family 35, member B2	AF414190|Slc35b2|73836|solute carrier family 35, member B2	AK154868|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr10_-_30338265_30338290	0.0555815	FOXD3.p2	AK002482|Hint3|66847|histidine triad nucleotide binding protein 3
mm9_v1_chr9_-_48288557_48288687	0.0554929	FOXD3.p2	AK178028|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK209299|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK212689|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK171619|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK150287|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	BC003445|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)
mm9_v1_chr2_-_115890747_115890848	0.0554506	FOXD3.p2	U68383|Meis2|17536|Meis homeobox 2	U68384|Meis2|17536|Meis homeobox 2	AJ000504|Meis2|17536|Meis homeobox 2	AJ000505|Meis2|17536|Meis homeobox 2	AJ000506|Meis2|17536|Meis homeobox 2	AJ000507|Meis2|17536|Meis homeobox 2	AK146633|Meis2|17536|Meis homeobox 2	NM_001136072|Meis2|17536|Meis homeobox 2	NM_001159567|Meis2|17536|Meis homeobox 2	NM_001159568|Meis2|17536|Meis homeobox 2	NM_010825|Meis2|17536|Meis homeobox 2	BC017375|Meis2|17536|Meis homeobox 2
mm9_v1_chr7_+_104100067_104100098	0.0552507	FOXD3.p2	AK164179|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK047091|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK050718|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
mm9_v1_chr2_-_163450863_163450871	0.0551564	FOXD3.p2	AK003471|Serinc3|26943|serine incorporator 3
mm9_v1_chr16_+_17045125_17045167	0.0550718	FOXD3.p2	AK163692|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr19_-_10557362_10557417	0.0549716	FOXD3.p2	BC118523|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AY032666|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	NM_133689|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK005821|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK016325|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene
mm9_v1_chr1_-_58558259_58558259	0.0549028	FOXD3.p2	AB190256|Orc2|18393|origin recognition complex, subunit 2	NM_001025378|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr5_+_116010796_116010949	0.054865	FOXD3.p2	BC030189|Rplp0|11837|ribosomal protein, large, P0	AK193996|Rplp0|11837|ribosomal protein, large, P0	AK205179|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr15_+_6395311_6395349	0.0548649	FOXD3.p2	BC011137|C9|12279|complement component 9	NM_013485|C9|12279|complement component 9
mm9_v1_chr2_-_104689616_104690006	0.0548039	FOXD3.p2	AK166405|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC115470|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK035530|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC099390|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK037087|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151011|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151019|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK038703|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_178695|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
mm9_v1_chr17_+_34781733_34781827	0.0547806	FOXD3.p2	AK146018|Fkbpl|56299|FK506 binding protein-like	BC046338|Fkbpl|56299|FK506 binding protein-like	NM_019873|Fkbpl|56299|FK506 binding protein-like
mm9_v1_chr6_-_143048580_143048646	0.0547227	FOXD3.p2	AK029825|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK021056|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	BC027763|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK143732|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_001109688|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_029081|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_029897|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene
mm9_v1_chr9_+_37209586_37209656	0.0546958	FOXD3.p2	BC071193|Robo4|74144|roundabout homolog 4 (Drosophila)	AF536772|Robo4|74144|roundabout homolog 4 (Drosophila)	AK004723|Robo4|74144|roundabout homolog 4 (Drosophila)	NM_028783|Robo4|74144|roundabout homolog 4 (Drosophila)	AK087355|Robo4|74144|roundabout homolog 4 (Drosophila)
mm9_v1_chr11_+_63892985_63892998	0.0546846	FOXD3.p2	AK007927|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene	AK012631|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene
mm9_v1_chr13_+_41012969_41013020	0.0546038	FOXD3.p2	AY236875|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_133219|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK019924|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	BC054845|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr3_+_62142698_62142868	0.0545172	FOXD3.p2	NM_001081295|Arhgef26|622434|Rho guanine nucleotide exchange factor (GEF) 26
mm9_v1_chr9_-_58097422_58097566	0.0544892	FOXD3.p2	AK193824|Pml|18854|promyelocytic leukemia	AK156054|Pml|18854|promyelocytic leukemia	AK157346|Pml|18854|promyelocytic leukemia	AK156279|Pml|18854|promyelocytic leukemia	U33626|Pml|18854|promyelocytic leukemia	AK156175|Pml|18854|promyelocytic leukemia	BC020990|Pml|18854|promyelocytic leukemia	AK137538|Pml|18854|promyelocytic leukemia	AK157035|Pml|18854|promyelocytic leukemia
mm9_v1_chr1_+_97230610_97230736	0.0544354	FOXD3.p2	AK152164|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr17_+_32643402_32643407	0.0543905	FOXD3.p2	NM_001101445|Cyp4f17|208285|cytochrome P450, family 4, subfamily f, polypeptide 17
mm9_v1_chr5_-_72895711_72895778	0.0542514	FOXD3.p2	BC093485|Corin|53419|corin	NM_001122756|Corin|53419|corin
mm9_v1_chr10_+_24589791_24589858	0.0540011	FOXD3.p2	NM_001166416|Med23|70208|mediator complex subunit 23	NM_027347|Med23|70208|mediator complex subunit 23	AK028545|Med23|70208|mediator complex subunit 23	AK042346|Med23|70208|mediator complex subunit 23	AF507918|Med23|70208|mediator complex subunit 23	BC050916|Med23|70208|mediator complex subunit 23	BC040398|Med23|70208|mediator complex subunit 23	AK129312|Med23|70208|mediator complex subunit 23
mm9_v1_chr4_+_155484072_155484109	0.0539989	FOXD3.p2	AK029276|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	BC004010|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_145557|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_177205|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	AK034620|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene
mm9_v1_chr6_+_134874663_134874674	0.0539716	FOXD3.p2	AK154276|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK169586|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr9_-_57287763_57287952	0.0538	FOXD3.p2	AK031599|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	AK038628|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	AK036042|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	AK078825|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	AK007887|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	BC004779|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	NM_176831|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase
mm9_v1_chr7_+_13483153_13483228	0.0537928	FOXD3.p2	AK052559|Zscan22|232878|zinc finger and SCAN domain containing 22	AK085207|Zscan22|232878|zinc finger and SCAN domain containing 22	NM_001001447|Zscan22|232878|zinc finger and SCAN domain containing 22	AK163694|Zscan22|232878|zinc finger and SCAN domain containing 22	AK078591|Zscan22|232878|zinc finger and SCAN domain containing 22	BC026676|Zscan22|232878|zinc finger and SCAN domain containing 22
mm9_v1_chr5_+_119214935_119215085	0.0536703	FOXD3.p2	AK083611|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr4_-_11131570_11131684	0.0536016	FOXD3.p2	AK050920|Ints8|72656|integrator complex subunit 8
mm9_v1_chr10_-_93352485_93352578	0.0535148	FOXD3.p2	BC092052|Metap2|56307|methionine aminopeptidase 2	BC010263|Metap2|56307|methionine aminopeptidase 2	AF434712|Metap2|56307|methionine aminopeptidase 2	AK165845|Metap2|56307|methionine aminopeptidase 2	BC002213|Metap2|56307|methionine aminopeptidase 2	AK147097|Metap2|56307|methionine aminopeptidase 2	AK159650|Metap2|56307|methionine aminopeptidase 2	AK163318|Metap2|56307|methionine aminopeptidase 2
mm9_v1_chr1_+_165992203_165992294	0.0534541	FOXD3.p2	AK170753|Sell|20343|selectin, lymphocyte	NM_001164059|Sell|20343|selectin, lymphocyte	NM_011346|Sell|20343|selectin, lymphocyte	AK161754|Sell|20343|selectin, lymphocyte	AK157273|Sell|20343|selectin, lymphocyte	AK172116|Sell|20343|selectin, lymphocyte	BC052681|Sell|20343|selectin, lymphocyte	M25324|Sell|20343|selectin, lymphocyte	X14772|Sell|20343|selectin, lymphocyte	M36005|Sell|20343|selectin, lymphocyte	M36058|Sell|20343|selectin, lymphocyte	AK137509|Sell|20343|selectin, lymphocyte
mm9_v1_chr11_-_101646571_101646623	0.0534509	FOXD3.p2	AK166136|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	AK144590|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	AK144538|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	NM_008815|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chr3_+_14641726_14641789	0.0533028	FOXD3.p2	AK162621|Car13|71934|carbonic anhydrase 13	NM_024495|Car13|71934|carbonic anhydrase 13	AK153080|Car13|71934|carbonic anhydrase 13	AK153353|Car13|71934|carbonic anhydrase 13	AK010166|Car13|71934|carbonic anhydrase 13	AK150871|Car13|71934|carbonic anhydrase 13	AK150897|Car13|71934|carbonic anhydrase 13	AK151978|Car13|71934|carbonic anhydrase 13	BC064050|Car13|71934|carbonic anhydrase 13	AF231123|Car13|71934|carbonic anhydrase 13	AK152124|Car13|71934|carbonic anhydrase 13	AK153258|Car13|71934|carbonic anhydrase 13	AK151519|Car13|71934|carbonic anhydrase 13
mm9_v1_chr4_-_106979732_106979773	0.0532881	FOXD3.p2	AK002549|Dio1|13370|deiodinase, iodothyronine, type I	BC089608|Dio1|13370|deiodinase, iodothyronine, type I	NM_007860|Dio1|13370|deiodinase, iodothyronine, type I	U49861|Dio1|13370|deiodinase, iodothyronine, type I	BC019786|Dio1|13370|deiodinase, iodothyronine, type I	BC037080|Dio1|13370|deiodinase, iodothyronine, type I
mm9_v1_chr1_-_84835871_84836168	0.0532283	FOXD3.p2	AK158807|Trip12|14897|thyroid hormone receptor interactor 12	NM_133975|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr8_+_125589362_125589405	0.0531586	FOXD3.p2	AF512565|Spg7|234847|spastic paraplegia 7 homolog (human)
mm9_v1_chr14_+_102239673_102239864	0.053079	FOXD3.p2	AK053129|Lmo7|380928|LIM domain only 7	AK143133|Lmo7|380928|LIM domain only 7	AK129231|Lmo7|380928|LIM domain only 7
mm9_v1_chr15_-_93228666_93228789	0.0530404	FOXD3.p2	AK042283|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	BC058368|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK012852|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	NM_026025|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK170136|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK012589|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AB095989|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1
mm9_v1_chr10_+_127521417_127521506	0.0530201	FOXD3.p2	AK179339|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK205339|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK203332|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr15_-_8660462_8660476	0.0529647	FOXD3.p2	AK031831|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK040798|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK049090|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK082736|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U75377|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr11_-_101755622_101755677	0.0528718	FOXD3.p2	Z15103|Meox1|17285|mesenchyme homeobox 1	BC011082|Meox1|17285|mesenchyme homeobox 1	NM_010791|Meox1|17285|mesenchyme homeobox 1	AK052370|Meox1|17285|mesenchyme homeobox 1
mm9_v1_chr12_+_37968225_37968446	0.0528716	FOXD3.p2	AK040702|Tmem195|319660|transmembrane protein 195	NM_178767|Tmem195|319660|transmembrane protein 195	BC038044|Tmem195|319660|transmembrane protein 195	AK050246|Tmem195|319660|transmembrane protein 195	AK163155|Tmem195|319660|transmembrane protein 195
mm9_v1_chr9_-_110959702_110959793	0.052669	FOXD3.p2	AF030185|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AK145946|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AK007808|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	NM_017466|Ccrl2|54199|chemokine (C-C motif) receptor-like 2
mm9_v1_chr15_-_35085306_35085560	0.0526023	FOXD3.p2	AF271361|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	BC049123|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	U28726|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	AY058922|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	BC037440|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	NM_019635|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)
mm9_v1_chr4_-_60594959_60595030	0.0522183	FOXD3.p2	EU882231|Mup10|100039008|major urinary protein 10	BC055353|LOC100048884|100048884|novel member of the major urinary protein (Mup) gene family	M28649|Mup1|17840|major urinary protein 1	NM_001122647|Mup10|100039008|major urinary protein 10
mm9_v1_chr16_+_45094163_45094171	0.0522176	FOXD3.p2	AK132178|Ccdc80|67896|coiled-coil domain containing 80	NM_026439|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr8_-_93657840_93657925	0.0522132	FOXD3.p2	BC008130|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	Z68183|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	AK146459|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	AK158704|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	BC034861|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein
mm9_v1_chr7_+_109214226_109214271	0.0521518	FOXD3.p2	AK040538|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	NM_011644|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	AK013894|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	AK041300|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2
mm9_v1_chr10_+_4978128_4978288	0.0521276	FOXD3.p2	AK032502|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr6_-_128312524_128312777	0.0520497	FOXD3.p2	AK029454|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK011109|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK011167|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK020031|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene
mm9_v1_chr15_-_94408654_94408675	0.0518611	FOXD3.p2	
mm9_v1_chr12_-_4881150_4881164	0.0518434	FOXD3.p2	AK157892|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK162620|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK171660|Mfsd2b|432628|major facilitator superfamily domain containing 2B	BC145584|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK156138|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK133061|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK172423|Mfsd2b|432628|major facilitator superfamily domain containing 2B	NM_001033488|Mfsd2b|432628|major facilitator superfamily domain containing 2B
mm9_v1_chr4_+_94406002_94406012	0.0515642	FOXD3.p2	AK053336|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr5_-_92864088_92864269	0.0515088	FOXD3.p2	AK150841|Nup54|269113|nucleoporin 54	AK151896|Nup54|269113|nucleoporin 54	AK152136|Nup54|269113|nucleoporin 54	BC068114|Nup54|269113|nucleoporin 54	AK014260|Nup54|269113|nucleoporin 54	AK087827|Nup54|269113|nucleoporin 54	BC044303|Nup54|269113|nucleoporin 54	AK088855|Nup54|269113|nucleoporin 54	AK150182|Nup54|269113|nucleoporin 54	AK162037|Nup54|269113|nucleoporin 54	AK133841|Nup54|269113|nucleoporin 54	NM_183392|Nup54|269113|nucleoporin 54
mm9_v1_chr14_-_109313447_109313461	0.0514469	FOXD3.p2	NM_199065|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr7_+_130337876_130337891	0.0514153	FOXD3.p2	AK014218|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr13_+_38243146_38243311	0.0512771	FOXD3.p2	NM_023842|Dsp|109620|desmoplakin
mm9_v1_chr1_-_173177232_173177235	0.051232	FOXD3.p2	AK168971|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr9_+_57369014_57369041	0.0512123	FOXD3.p2	NM_007747|Cox5a|12858|cytochrome c oxidase, subunit Va
mm9_v1_chr3_-_141645214_141645214	0.0512062	FOXD3.p2	BC065143|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B	NM_007560|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B
mm9_v1_chr16_+_92086695_92086827	0.0511078	FOXD3.p2	AK133105|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3
mm9_v1_chr6_-_148937854_148937926	0.0511067	FOXD3.p2	AK143126|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr18_-_60908267_60908331	0.0510889	FOXD3.p2	AK147282|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AK035642|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr14_+_105658063_105658107	0.051068	FOXD3.p2	AK031073|Ndfip2|76273|Nedd4 family interacting protein 2	AK150832|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr7_-_144506091_144506108	0.0510661	FOXD3.p2	BC067018|Ebf3|13593|early B-cell factor 3
mm9_v1_chr9_+_7792286_7792314	0.0510125	FOXD3.p2	AK150630|Tmem123|71929|transmembrane protein 123
mm9_v1_chr12_-_80007923_80007953	0.0509453	FOXD3.p2	BC028902|Plek2|27260|pleckstrin 2	NM_013738|Plek2|27260|pleckstrin 2	AF170564|Plek2|27260|pleckstrin 2
mm9_v1_chr2_+_164286416_164286607	0.050898	FOXD3.p2	AK007882|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	NM_025575|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK139605|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK011753|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK003071|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK013220|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK032073|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK009684|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK075770|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005510|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK148305|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005249|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm9_v1_chr6_-_83725776_83725818	0.0508505	FOXD3.p2	AK157834|Tex261|21766|testis expressed gene 261	NM_009357|Tex261|21766|testis expressed gene 261
mm9_v1_chr1_+_169238849_169238926	0.0506835	FOXD3.p2	AK162344|Tmco1|68944|transmembrane and coiled-coil domains 1	AK037709|Tmco1|68944|transmembrane and coiled-coil domains 1	BC019761|Tmco1|68944|transmembrane and coiled-coil domains 1	BC020098|Tmco1|68944|transmembrane and coiled-coil domains 1	BC011457|Tmco1|68944|transmembrane and coiled-coil domains 1
mm9_v1_chr1_-_75139207_75139284	0.050681	FOXD3.p2	AK169779|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK145962|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr1_-_190831705_190831735	0.050667	FOXD3.p2	BC079581|Kctd3|226823|potassium channel tetramerisation domain containing 3	BC061458|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK049362|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK034380|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK087865|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK139700|Kctd3|226823|potassium channel tetramerisation domain containing 3	NM_172650|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK033491|Kctd3|226823|potassium channel tetramerisation domain containing 3
mm9_v1_chr3_+_132772586_132772695	0.0505817	FOXD3.p2	AK015941|Ints12|71793|integrator complex subunit 12
mm9_v1_chr8_+_77517536_77517607	0.0505514	FOXD3.p2	AK156670|Hmgxb4|70823|HMG box domain containing 4	AK014640|Hmgxb4|70823|HMG box domain containing 4	BC048188|Hmgxb4|70823|HMG box domain containing 4	BC049800|Hmgxb4|70823|HMG box domain containing 4	NM_178017|Hmgxb4|70823|HMG box domain containing 4	BC023721|Hmgxb4|70823|HMG box domain containing 4
mm9_v1_chr7_-_36103433_36103463	0.0505016	FOXD3.p2	BC100577|Gpatch1|67471|G patch domain containing 1	AK154571|Gpatch1|67471|G patch domain containing 1	AK014367|Gpatch1|67471|G patch domain containing 1	BC125584|Gpatch1|67471|G patch domain containing 1	BC132155|Gpatch1|67471|G patch domain containing 1	AK004868|Gpatch1|67471|G patch domain containing 1	NM_026181|Gpatch1|67471|G patch domain containing 1
mm9_v1_chr7_+_31017305_31017379	0.0503954	FOXD3.p2	AK012635|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I	AB221537|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I
mm9_v1_chr4_-_142752030_142752032	0.0502883	FOXD3.p2	AK156880|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr12_-_55304834_55304865	0.0502825	FOXD3.p2	AJ310548|Egln3|112407|EGL nine homolog 3 (C. elegans)	AK044787|Egln3|112407|EGL nine homolog 3 (C. elegans)	NM_028133|Egln3|112407|EGL nine homolog 3 (C. elegans)
mm9_v1_chr15_-_90764873_90764944	0.0501979	FOXD3.p2	AK052821|Kif21a|16564|kinesin family member 21A	AK047208|Kif21a|16564|kinesin family member 21A
mm9_v1_chr14_+_25309895_25309936	0.0501281	FOXD3.p2	NM_011297|Rps24|20088|ribosomal protein S24	NM_207634|Rps24|20088|ribosomal protein S24	NM_207635|Rps24|20088|ribosomal protein S24
mm9_v1_chr12_-_53072250_53072307	0.0499798	FOXD3.p2	AK047221|Heatr5a|320487|HEAT repeat containing 5A	AK080280|Heatr5a|320487|HEAT repeat containing 5A	AK053055|Heatr5a|320487|HEAT repeat containing 5A	NM_177171|Heatr5a|320487|HEAT repeat containing 5A
mm9_v1_chr7_-_133935662_133935720	0.049884	FOXD3.p2	AK144244|Ppp4c|56420|protein phosphatase 4, catalytic subunit
mm9_v1_chr5_-_143665474_143665607	0.0498689	FOXD3.p2	
mm9_v1_chr11_-_61575474_61575589	0.0498231	FOXD3.p2	BC051438|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC106185|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK076811|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK077330|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK038680|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC023178|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164242|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164243|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164244|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_144806|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2
mm9_v1_chr1_-_170085342_170085390	0.049627	FOXD3.p2	AK083616|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr11_+_53138176_53138190	0.0495605	FOXD3.p2	AK010803|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK027985|Zcchc10|67966|zinc finger, CCHC domain containing 10	BC025078|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK020177|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK169856|Zcchc10|67966|zinc finger, CCHC domain containing 10	BC087902|Zcchc10|67966|zinc finger, CCHC domain containing 10	NM_026479|Zcchc10|67966|zinc finger, CCHC domain containing 10
mm9_v1_chr10_+_18127443_18127504	0.0495473	FOXD3.p2	AK041760|Nhsl1|215819|NHS-like 1	AK017530|Nhsl1|215819|NHS-like 1	NM_173390|Nhsl1|215819|NHS-like 1	AK038892|Nhsl1|215819|NHS-like 1
mm9_v1_chr13_+_3553690_3553705	0.0495356	FOXD3.p2	AK207166|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK213780|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr19_+_10525829_10525836	0.0495015	FOXD3.p2	
mm9_v1_chr9_-_96379093_96379128	0.0494589	FOXD3.p2	AK006703|Rnf7|19823|ring finger protein 7
mm9_v1_chr3_-_137644466_137644512	0.0494327	FOXD3.p2	AF163255|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK145745|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK146180|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AF186023|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK079794|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK169584|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	BC014759|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	NM_011932|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1
mm9_v1_chr17_+_45692647_45692701	0.0493264	FOXD3.p2	AK008843|Nfkbie|18037|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	AK151450|Nfkbie|18037|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	AK151692|Nfkbie|18037|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	AK011965|Nfkbie|18037|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	BC030923|Nfkbie|18037|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	NM_008690|Nfkbie|18037|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	AK153248|Nfkbie|18037|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	AK088585|Nfkbie|18037|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
mm9_v1_chr14_+_75642093_75642165	0.049222	FOXD3.p2	AF164524|Cpb2|56373|carboxypeptidase B2 (plasma)	NM_019775|Cpb2|56373|carboxypeptidase B2 (plasma)	AK004045|Cpb2|56373|carboxypeptidase B2 (plasma)	BC089577|Cpb2|56373|carboxypeptidase B2 (plasma)	AB021968|Cpb2|56373|carboxypeptidase B2 (plasma)	AF186188|Cpb2|56373|carboxypeptidase B2 (plasma)
mm9_v1_chr11_-_109334465_109334613	0.0491522	FOXD3.p2	AK170472|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	BC017129|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	NM_134038|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm9_v1_chrX_+_38754658_38754822	0.0489836	FOXD3.p2	AK161163|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB022342|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC129855|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC129856|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK220530|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK135043|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB079072|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB102775|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AB102776|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AF483494|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AF483495|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	AK046158|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr1_-_55283189_55283376	0.0489451	FOXD3.p2	BC026871|Rftn2|74013|raftlin family member 2	AK014318|Rftn2|74013|raftlin family member 2
mm9_v1_chr8_+_88016464_88016489	0.048874	FOXD3.p2	AK082030|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	BC034219|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2
mm9_v1_chr4_+_154975473_154975535	0.0487863	FOXD3.p2	AK080215|Slc35e2|320541|solute carrier family 35, member E2	BC058728|Slc35e2|320541|solute carrier family 35, member E2	NM_177186|Slc35e2|320541|solute carrier family 35, member E2
mm9_v1_chr1_-_173177212_173177226	0.0487817	FOXD3.p2	AK151746|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	AK153364|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	BC003898|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr18_+_56591785_56591811	0.048777	FOXD3.p2	NM_026240|Gramd3|107022|GRAM domain containing 3	AK018691|Gramd3|107022|GRAM domain containing 3	AK164050|Gramd3|107022|GRAM domain containing 3
mm9_v1_chr10_-_95010006_95010009	0.0486648	FOXD3.p2	AK190818|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK196789|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK201590|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK202794|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4
mm9_v1_chr11_-_80191456_80191500	0.0486476	FOXD3.p2	AK135352|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK017667|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	BC055024|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene
mm9_v1_chr8_-_114400574_114400649	0.0483934	FOXD3.p2	AK018496|Tmem170|66817|transmembrane protein 170	NM_025781|Tmem170|66817|transmembrane protein 170	AK007926|Tmem170|66817|transmembrane protein 170	BC139377|Tmem170|66817|transmembrane protein 170	BC145964|Tmem170|66817|transmembrane protein 170
mm9_v1_chr9_+_5345475_5345506	0.0483895	FOXD3.p2	AK077256|Casp12|12364|caspase 12	AK080045|Casp12|12364|caspase 12	NM_009808|Casp12|12364|caspase 12	AK046681|Casp12|12364|caspase 12	BC028979|Casp12|12364|caspase 12	AK161525|Casp12|12364|caspase 12	AK053407|Casp12|12364|caspase 12	AK030309|Casp12|12364|caspase 12	AY675223|Casp12|12364|caspase 12	AY675224|Casp12|12364|caspase 12
mm9_v1_chr9_-_123626642_123626742	0.0483846	FOXD3.p2	AK046515|Lztfl1|93730|leucine zipper transcription factor-like 1	BC037045|Lztfl1|93730|leucine zipper transcription factor-like 1	AJ297352|Lztfl1|93730|leucine zipper transcription factor-like 1	BC098224|Lztfl1|93730|leucine zipper transcription factor-like 1	BC026840|Lztfl1|93730|leucine zipper transcription factor-like 1	NM_033322|Lztfl1|93730|leucine zipper transcription factor-like 1	AK054003|Lztfl1|93730|leucine zipper transcription factor-like 1	AK157770|Lztfl1|93730|leucine zipper transcription factor-like 1	AK145263|Lztfl1|93730|leucine zipper transcription factor-like 1	AK030068|Lztfl1|93730|leucine zipper transcription factor-like 1	AK029671|Lztfl1|93730|leucine zipper transcription factor-like 1	AK041091|Lztfl1|93730|leucine zipper transcription factor-like 1	AK147312|Lztfl1|93730|leucine zipper transcription factor-like 1
mm9_v1_chrX_+_103211038_103211115	0.0481832	FOXD3.p2	BC089538|Cox7b|66142|cytochrome c oxidase subunit VIIb	NM_025379|Cox7b|66142|cytochrome c oxidase subunit VIIb	AK132086|Cox7b|66142|cytochrome c oxidase subunit VIIb	AK003414|Cox7b|66142|cytochrome c oxidase subunit VIIb	AK002593|Cox7b|66142|cytochrome c oxidase subunit VIIb	BC024350|Cox7b|66142|cytochrome c oxidase subunit VIIb
mm9_v1_chr12_-_16746933_16747013	0.0481465	FOXD3.p2	AK045057|Greb1|268527|gene regulated by estrogen in breast cancer protein
mm9_v1_chr6_-_113841295_113841343	0.0480893	FOXD3.p2	AK147357|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr2_+_17976897_17976897	0.0478813	FOXD3.p2	BC070475|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	NM_010804|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chrX_+_139997806_139997811	0.0478659	FOXD3.p2	NM_008778|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	BC053403|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr5_-_30460623_30460706	0.047846	FOXD3.p2	AK179416|Hadha|97212|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit	AK188264|Hadha|97212|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit	AK217494|Hadha|97212|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit
mm9_v1_chr7_+_88716050_88716233	0.0478115	FOXD3.p2	AK162084|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	AK080911|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	AK140311|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	BC042749|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	AK220273|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	NM_001004185|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules
mm9_v1_chr7_+_137836116_137836140	0.0477173	FOXD3.p2	AK165194|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr18_-_56732522_56732548	0.0477036	FOXD3.p2	AK004991|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr7_+_140175699_140175731	0.0476661	FOXD3.p2	AJ250693|Zranb1|360216|zinc finger, RAN-binding domain containing 1
mm9_v1_chr1_+_136859183_136859192	0.0476356	FOXD3.p2	AK012565|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)	BC029213|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)
mm9_v1_chr6_-_134837738_134837876	0.0474492	FOXD3.p2	U46923|Gpr19|14760|G protein-coupled receptor 19	BC050187|Gpr19|14760|G protein-coupled receptor 19	NM_001167697|Gpr19|14760|G protein-coupled receptor 19	NM_001167699|Gpr19|14760|G protein-coupled receptor 19	NM_008157|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr7_-_31011907_31012028	0.0473344	FOXD3.p2	AK214432|Tbcb|66411|tubulin folding cofactor B
mm9_v1_chr16_+_45158927_45158941	0.0472814	FOXD3.p2	AK005266|Atg3|67841|autophagy-related 3 (yeast)	AK011409|Atg3|67841|autophagy-related 3 (yeast)	AK150914|Atg3|67841|autophagy-related 3 (yeast)	AK159231|Atg3|67841|autophagy-related 3 (yeast)	NM_026402|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr1_-_69154627_69154642	0.0472784	FOXD3.p2	AK144050|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_010154|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
mm9_v1_chr10_+_128227964_128228056	0.0472515	FOXD3.p2	AK079924|Mmp19|58223|matrix metallopeptidase 19	NM_001164197|Mmp19|58223|matrix metallopeptidase 19	AK080125|Mmp19|58223|matrix metallopeptidase 19	AK136517|Mmp19|58223|matrix metallopeptidase 19	NM_021412|Mmp19|58223|matrix metallopeptidase 19	AK154863|Mmp19|58223|matrix metallopeptidase 19	AF155221|Mmp19|58223|matrix metallopeptidase 19	AF162446|Mmp19|58223|matrix metallopeptidase 19	BC112966|Mmp19|58223|matrix metallopeptidase 19	AF153199|Mmp19|58223|matrix metallopeptidase 19
mm9_v1_chr15_+_39029806_39029908	0.0472075	FOXD3.p2	AK012864|Rims2|116838|regulating synaptic membrane exocytosis 2	AB021131|Rims2|116838|regulating synaptic membrane exocytosis 2	NM_053271|Rims2|116838|regulating synaptic membrane exocytosis 2	BC118979|Rims2|116838|regulating synaptic membrane exocytosis 2	HM015529|Rims2|116838|regulating synaptic membrane exocytosis 2
mm9_v1_chr19_-_32177613_32177629	0.0471985	FOXD3.p2	BC137898|Asah2|54447|N-acylsphingosine amidohydrolase 2	BC145016|Asah2|54447|N-acylsphingosine amidohydrolase 2	AB037181|Asah2|54447|N-acylsphingosine amidohydrolase 2	NM_018830|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr11_-_109583475_109583498	0.0470923	FOXD3.p2	BC011274|Fam20a|208659|family with sequence similarity 20, member A
mm9_v1_chr4_-_3762743_3762751	0.0470822	FOXD3.p2	AK014594|Rps20|67427|ribosomal protein S20	AK150972|Rps20|67427|ribosomal protein S20	AK002405|Rps20|67427|ribosomal protein S20	AK145656|Rps20|67427|ribosomal protein S20	NM_026147|Rps20|67427|ribosomal protein S20	AK136398|Rps20|67427|ribosomal protein S20
mm9_v1_chr3_-_115710131_115710328	0.0470811	FOXD3.p2	AF529196|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AF233322|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC050193|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC017136|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK075802|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK010008|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	NM_023214|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7
mm9_v1_chr15_-_97077552_97077717	0.047081	FOXD3.p2	BC095990|Amigo2|105827|adhesion molecule with Ig like domain 2	AK030848|Amigo2|105827|adhesion molecule with Ig like domain 2	AK038783|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164563|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164602|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_178114|Amigo2|105827|adhesion molecule with Ig like domain 2
mm9_v1_chr4_-_126991216_126991282	0.0470375	FOXD3.p2	BC056613|Gja4|14612|gap junction protein, alpha 4	AF216832|Gja4|14612|gap junction protein, alpha 4	NM_008120|Gja4|14612|gap junction protein, alpha 4	AK143024|Gja4|14612|gap junction protein, alpha 4
mm9_v1_chr11_-_53520811_53520848	0.0469758	FOXD3.p2	BC002033|Rad50|19360|RAD50 homolog (S. cerevisiae)	AK018001|Rad50|19360|RAD50 homolog (S. cerevisiae)	AK037641|Rad50|19360|RAD50 homolog (S. cerevisiae)	NM_009012|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr5_+_9100681_9100767	0.0468986	FOXD3.p2	AK140314|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene	NM_001081029|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene	AK087170|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene
mm9_v1_chr1_-_72330767_72330887	0.0468873	FOXD3.p2	AF232011|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	BC013530|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AF242204|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AK090327|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AK135714|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AK162100|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AK010260|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	NM_023523|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase
mm9_v1_chr11_-_100334076_100334121	0.0467769	FOXD3.p2	BC111873|Klhl11|217194|kelch-like 11 (Drosophila)	AK029101|Klhl11|217194|kelch-like 11 (Drosophila)	NM_172565|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr7_-_36181628_36181850	0.0467239	FOXD3.p2	BC096687|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK153918|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK082457|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	NM_178643|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK040248|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK031566|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK166481|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene
mm9_v1_chr12_-_100801791_100801815	0.0466773	FOXD3.p2	AK053772|Foxn3|71375|forkhead box N3
mm9_v1_chr8_-_73046985_73047078	0.0466439	FOXD3.p2	AK155003|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK013135|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK002695|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC048938|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC053944|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	NM_029366|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene
mm9_v1_chr9_+_68501551_68501608	0.0465828	FOXD3.p2	AK086033|Rora|19883|RAR-related orphan receptor alpha	NM_013646|Rora|19883|RAR-related orphan receptor alpha	U53228|Rora|19883|RAR-related orphan receptor alpha
mm9_v1_chr14_-_103482076_103482219	0.0465563	FOXD3.p2	AK083561|Fbxl3|50789|F-box and leucine-rich repeat protein 3
mm9_v1_chr18_-_53904193_53904270	0.0465181	FOXD3.p2	AK044952|Cep120|225523|centrosomal protein 120	BC053439|Cep120|225523|centrosomal protein 120	NM_178686|Cep120|225523|centrosomal protein 120	AK089236|Cep120|225523|centrosomal protein 120	AK089242|Cep120|225523|centrosomal protein 120	AK044808|Cep120|225523|centrosomal protein 120	AK079319|Cep120|225523|centrosomal protein 120	AK047594|Cep120|225523|centrosomal protein 120	AK038916|Cep120|225523|centrosomal protein 120
mm9_v1_chr9_+_43552516_43552726	0.0463885	FOXD3.p2	BC060694|Pvrl1|58235|poliovirus receptor-related 1	NM_021424|Pvrl1|58235|poliovirus receptor-related 1	AF297665|Pvrl1|58235|poliovirus receptor-related 1	AF239762|Pvrl1|58235|poliovirus receptor-related 1	AF270977|Pvrl1|58235|poliovirus receptor-related 1
mm9_v1_chr1_-_193961641_193961894	0.0462991	FOXD3.p2	BC138938|Rcor3|214742|REST corepressor 3	BC138939|Rcor3|214742|REST corepressor 3	BC145469|Rcor3|214742|REST corepressor 3	AK203210|Rcor3|214742|REST corepressor 3	BC057141|Rcor3|214742|REST corepressor 3	NM_144814|Rcor3|214742|REST corepressor 3	BC020065|Rcor3|214742|REST corepressor 3	AK135612|Rcor3|214742|REST corepressor 3	AK155440|Rcor3|214742|REST corepressor 3
mm9_v1_chr4_+_137762192_137762206	0.0462759	FOXD3.p2	AK005120|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3
mm9_v1_chr2_-_126701791_126701996	0.0462062	FOXD3.p2	BC145122|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	BC150709|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AF376052|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK162483|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK014698|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AF149013|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AY032951|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK052823|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	NM_001164325|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	NM_021450|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7
mm9_v1_chr4_+_8534378_8534506	0.0461825	FOXD3.p2	AK216326|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr11_-_115474200_115474295	0.0460499	FOXD3.p2	BC026745|Mif4gd|69674|MIF4G domain containing	AK010175|Mif4gd|69674|MIF4G domain containing	AK150749|Mif4gd|69674|MIF4G domain containing	BC019515|Mif4gd|69674|MIF4G domain containing	BC026740|Mif4gd|69674|MIF4G domain containing
mm9_v1_chr6_+_108015037_108015048	0.046031	FOXD3.p2	AK017895|Setmar|74729|SET domain and mariner transposase fusion gene	NM_178391|Setmar|74729|SET domain and mariner transposase fusion gene	BC045208|Setmar|74729|SET domain and mariner transposase fusion gene
mm9_v1_chr2_-_34681496_34681692	0.0459128	FOXD3.p2	X54352|Fbxw2|30050|F-box and WD-40 domain protein 2	AK009893|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr16_+_21794392_21794464	0.0458665	FOXD3.p2	AK004850|1300002E11Rik|100043489|RIKEN cDNA 1300002E11 gene	AK005305|1300002E11Rik|100043489|RIKEN cDNA 1300002E11 gene	AK031500|1300002E11Rik|100043489|RIKEN cDNA 1300002E11 gene
mm9_v1_chrX_-_16488889_16488889	0.0456295	FOXD3.p2	BC090623|Ndp|17986|Norrie disease (pseudoglioma) (human)	NM_010883|Ndp|17986|Norrie disease (pseudoglioma) (human)
mm9_v1_chr18_-_80397324_80397437	0.0455587	FOXD3.p2	BC064066|Rbfa|68731|ribosome binding factor A	NM_199197|Rbfa|68731|ribosome binding factor A	AK004019|Rbfa|68731|ribosome binding factor A	AK145807|Rbfa|68731|ribosome binding factor A
mm9_v1_chrX_-_163023624_163023647	0.0455247	FOXD3.p2	AK078534|Egfl6|54156|EGF-like-domain, multiple 6	BC117702|Egfl6|54156|EGF-like-domain, multiple 6	AJ245672|Egfl6|54156|EGF-like-domain, multiple 6	AK053738|Egfl6|54156|EGF-like-domain, multiple 6	NM_019397|Egfl6|54156|EGF-like-domain, multiple 6
mm9_v1_chr13_-_23802635_23802683	0.0455035	FOXD3.p2	BC116746|Hfe|15216|hemochromatosis	BC116744|Hfe|15216|hemochromatosis	U66849|Hfe|15216|hemochromatosis	AK009581|Hfe|15216|hemochromatosis	AK088986|Hfe|15216|hemochromatosis	NM_010424|Hfe|15216|hemochromatosis
mm9_v1_chr2_+_71711274_71711402	0.0454528	FOXD3.p2	AK046805|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK153649|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	NM_172665|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK163553|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	BC027196|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK028017|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK085215|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	BC025480|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1
mm9_v1_chr10_-_80129835_80129910	0.0453531	FOXD3.p2	AK194807|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr7_+_27904981_27904993	0.0453351	FOXD3.p2	M77497|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr4_+_63205780_63205910	0.04533	FOXD3.p2	NM_024173|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK081611|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK007596|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK010131|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK168972|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK169079|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK088712|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	BC003429|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK003563|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK152699|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK159558|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AB076406|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	BC088836|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1
mm9_v1_chr15_-_76755823_76755834	0.0453206	FOXD3.p2	
mm9_v1_chr1_-_4483533_4483815	0.0452501	FOXD3.p2	BC060612|Sox17|20671|SRY-box containing gene 17	BC037521|Sox17|20671|SRY-box containing gene 17	BC027687|Sox17|20671|SRY-box containing gene 17
mm9_v1_chrX_-_154036606_154036649	0.0450083	FOXD3.p2	AK148325|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	NM_172307|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr3_-_59147980_59148315	0.0449998	FOXD3.p2	AK132367|Igsf10|242050|immunoglobulin superfamily, member 10	NM_001162884|Igsf10|242050|immunoglobulin superfamily, member 10	AK143421|Igsf10|242050|immunoglobulin superfamily, member 10
mm9_v1_chr8_+_73051648_73051650	0.0449677	FOXD3.p2	AK153000|Fkbp8|14232|FK506 binding protein 8	AK165281|Fkbp8|14232|FK506 binding protein 8	AK146122|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chrX_-_71618556_71618610	0.0449538	FOXD3.p2	EU599043|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599044|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599045|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	BC027440|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	NM_145406|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr1_-_173177243_173177273	0.0448431	FOXD3.p2	AK146269|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr9_+_118387306_118387461	0.0447967	FOXD3.p2	NM_001164789|Eomes|13813|eomesodermin homolog (Xenopus laevis)	NM_010136|Eomes|13813|eomesodermin homolog (Xenopus laevis)	AB031037|Eomes|13813|eomesodermin homolog (Xenopus laevis)	BC094319|Eomes|13813|eomesodermin homolog (Xenopus laevis)
mm9_v1_chr11_-_96688959_96689060	0.0445387	FOXD3.p2	BC047283|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AF071084|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	X78709|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr18_+_37890662_37890807	0.0444385	FOXD3.p2	BC057403|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AK156301|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AY013807|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	NM_033577|Pcdhgb5|93702|protocadherin gamma subfamily B, 5
mm9_v1_chr11_-_101321789_101321881	0.0443161	FOXD3.p2	AK216339|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)
mm9_v1_chr12_+_80309899_80309933	0.0442916	FOXD3.p2	AK164157|Rdh12|77974|retinol dehydrogenase 12	AK039233|Rdh12|77974|retinol dehydrogenase 12	NM_030017|Rdh12|77974|retinol dehydrogenase 12	AK020927|Rdh12|77974|retinol dehydrogenase 12	BC016204|Rdh12|77974|retinol dehydrogenase 12	BC067213|Rdh12|77974|retinol dehydrogenase 12
mm9_v1_chr9_-_79825502_79825688	0.0441669	FOXD3.p2	AK017709|Filip1|70598|filamin A interacting protein 1	BC125581|Filip1|70598|filamin A interacting protein 1	BC131965|Filip1|70598|filamin A interacting protein 1	NM_001081243|Filip1|70598|filamin A interacting protein 1
mm9_v1_chr18_+_38476622_38476661	0.0441155	FOXD3.p2	
mm9_v1_chr1_-_45559866_45559893	0.0440298	FOXD3.p2	BC055077|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr8_-_110112260_110112344	0.0438581	FOXD3.p2	AK146128|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	M64641|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	AK031013|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	AK159825|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	AK012463|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm9_v1_chr16_+_42955690_42955696	0.0438344	FOXD3.p2	BC002163|BC002163|170658|NADH dehydrogenase Fe-S protein 5 pseudogene
mm9_v1_chr2_+_110561733_110561771	0.0438084	FOXD3.p2	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr13_-_35085948_35086012	0.0437237	FOXD3.p2	AF153613|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	AK170778|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	AK009478|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	NM_011868|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	NM_001110331|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	NM_001110332|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase
mm9_v1_chr12_-_99972803_99972854	0.0431287	FOXD3.p2	D37801|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK013777|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK030456|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	NM_011877|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21
mm9_v1_chr8_+_107951514_107951547	0.0430956	FOXD3.p2	AK133042|Lrrc36|270091|leucine rich repeat containing 36	NM_001033371|Lrrc36|270091|leucine rich repeat containing 36	NM_001170789|Lrrc36|270091|leucine rich repeat containing 36	BC150957|Lrrc36|270091|leucine rich repeat containing 36	BC172120|Lrrc36|270091|leucine rich repeat containing 36
mm9_v1_chr15_+_5093855_5093914	0.0429461	FOXD3.p2	NM_001013367|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK160612|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK147811|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	BC086695|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	AY885266|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm9_v1_chr9_-_44226119_44226149	0.0429198	FOXD3.p2	AK162606|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr4_-_117354829_117354891	0.0428903	FOXD3.p2	AF438610|Dmap1|66233|DNA methyltransferase 1-associated protein 1	NM_023178|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK012055|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK005270|Dmap1|66233|DNA methyltransferase 1-associated protein 1
mm9_v1_chr10_+_59165307_59165416	0.0428751	FOXD3.p2	AK083520|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK049521|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK050113|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK046049|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC026566|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK077605|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK029884|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK052485|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC018320|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC023022|Cbara1|216001|calcium binding atopy-related autoantigen 1	NM_144822|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK085553|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK051470|Cbara1|216001|calcium binding atopy-related autoantigen 1
mm9_v1_chr9_+_77765170_77765271	0.0427695	FOXD3.p2	AK031743|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK162451|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	NM_134255|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK051580|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK045274|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK085663|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK085696|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK028761|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK167755|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK168360|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK088153|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK168987|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	BC022911|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm9_v1_chrX_+_104344953_104344955	0.0426847	FOXD3.p2	NM_175442|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene	AK041740|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chr18_+_37925619_37925770	0.0425225	FOXD3.p2	BC054528|Pcdhga12|93724|protocadherin gamma subfamily A, 12	U88550|Pcdhga12|93724|protocadherin gamma subfamily A, 12	AY013795|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr13_-_74199688_74199784	0.0424798	FOXD3.p2	BC080681|Cep72|74470|centrosomal protein 72	BC060686|Cep72|74470|centrosomal protein 72	AK017134|Cep72|74470|centrosomal protein 72	AK034892|Cep72|74470|centrosomal protein 72	NM_028959|Cep72|74470|centrosomal protein 72
mm9_v1_chr2_+_84776809_84776813	0.0424649	FOXD3.p2	NM_021398|Slc43a3|58207|solute carrier family 43, member 3
mm9_v1_chr9_-_37155912_37155976	0.0423124	FOXD3.p2	AK035850|Ccdc15|245902|coiled-coil domain containing 15	AK051119|Ccdc15|245902|coiled-coil domain containing 15	AK133297|Ccdc15|245902|coiled-coil domain containing 15	AK164955|Ccdc15|245902|coiled-coil domain containing 15	AK045055|Ccdc15|245902|coiled-coil domain containing 15	AK045339|Ccdc15|245902|coiled-coil domain containing 15	AK041803|Ccdc15|245902|coiled-coil domain containing 15	AK138231|Ccdc15|245902|coiled-coil domain containing 15	BC032924|Ccdc15|245902|coiled-coil domain containing 15	NM_001081429|Ccdc15|245902|coiled-coil domain containing 15
mm9_v1_chr14_+_25309938_25309954	0.0421597	FOXD3.p2	AK002495|Rps24|20088|ribosomal protein S24	AK005358|Rps24|20088|ribosomal protein S24	AK007776|Rps24|20088|ribosomal protein S24	AK008386|Rps24|20088|ribosomal protein S24	AK009048|Rps24|20088|ribosomal protein S24	AK010856|Rps24|20088|ribosomal protein S24	AK018704|Rps24|20088|ribosomal protein S24	AK052480|Rps24|20088|ribosomal protein S24	BC086882|Rps24|20088|ribosomal protein S24	AK151111|Rps24|20088|ribosomal protein S24	AK049387|Rps24|20088|ribosomal protein S24	AK135247|Rps24|20088|ribosomal protein S24	AK012537|Rps24|20088|ribosomal protein S24	BC058817|Rps24|20088|ribosomal protein S24
mm9_v1_chr9_+_107877887_107877985	0.0420906	FOXD3.p2	AK054410|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK089235|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK004894|Uba7|74153|ubiquitin-like modifier activating enzyme 7	NM_023738|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK170644|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK170421|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK089256|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK172467|Uba7|74153|ubiquitin-like modifier activating enzyme 7	BC138843|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK129009|Uba7|74153|ubiquitin-like modifier activating enzyme 7
mm9_v1_chr3_-_73512328_73512336	0.0420715	FOXD3.p2	AK050337|Bche|12038|butyrylcholinesterase	NM_009738|Bche|12038|butyrylcholinesterase
mm9_v1_chr6_-_5143755_5143945	0.0420365	FOXD3.p2	BC012706|Pon1|18979|paraoxonase 1	U72636|Pon1|18979|paraoxonase 1	U32684|Pon1|18979|paraoxonase 1	NM_011134|Pon1|18979|paraoxonase 1
mm9_v1_chr12_+_56499761_56499884	0.0420179	FOXD3.p2	NM_011968|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK152915|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK088143|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK161662|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	U60288|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	BC086685|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6
mm9_v1_chrX_-_9793578_9793578	0.0419303	FOXD3.p2	AK138977|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177952|Rpgr|19893|retinitis pigmentosa GTPase regulator
mm9_v1_chr15_-_89422293_89422353	0.0419248	FOXD3.p2	AK170205|Rabl2|68708|RAB, member of RAS oncogene family-like 2	AK004012|Rabl2|68708|RAB, member of RAS oncogene family-like 2	BC030376|Rabl2|68708|RAB, member of RAS oncogene family-like 2	AK051232|Rabl2|68708|RAB, member of RAS oncogene family-like 2	NM_026817|Rabl2|68708|RAB, member of RAS oncogene family-like 2
mm9_v1_chr6_+_54545104_54545338	0.0418383	FOXD3.p2	AK078040|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001164361|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK170592|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chr11_+_115243203_115243359	0.0418278	FOXD3.p2	NM_001080929|Cdr2l|237988|cerebellar degeneration-related protein 2-like	BC144823|Cdr2l|237988|cerebellar degeneration-related protein 2-like	BC150668|Cdr2l|237988|cerebellar degeneration-related protein 2-like
mm9_v1_chr10_-_90612412_90612509	0.0418172	FOXD3.p2	AK208952|Tmpo|21917|thymopoietin
mm9_v1_chr5_+_54200858_54200899	0.0418138	FOXD3.p2	NM_144517|Tbc1d19|67249|TBC1 domain family, member 19	AK083084|Tbc1d19|67249|TBC1 domain family, member 19
mm9_v1_chr9_+_4383536_4383536	0.041797	FOXD3.p2	AK180204|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	BC014729|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	NM_145609|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene
mm9_v1_chr7_-_29965500_29965550	0.0417444	FOXD3.p2	BC004075|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159795|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159926|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK166718|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK002921|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK003436|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK153329|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK150493|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK051257|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK020132|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr19_+_17468498_17468584	0.0413174	FOXD3.p2	NM_019437|Rfk|54391|riboflavin kinase	AK002806|Rfk|54391|riboflavin kinase
mm9_v1_chr7_+_3596827_3596852	0.0412892	FOXD3.p2	AK046141|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr2_-_34609888_34609977	0.0412174	FOXD3.p2	BC048847|Gapvd1|66691|GTPase activating protein and VPS9 domains 1	AK150026|Gapvd1|66691|GTPase activating protein and VPS9 domains 1	AK165047|Gapvd1|66691|GTPase activating protein and VPS9 domains 1
mm9_v1_chr6_-_21802087_21802170	0.0412045	FOXD3.p2	BC065152|Tspan12|269831|tetraspanin 12	AK033554|Tspan12|269831|tetraspanin 12	BC068240|Tspan12|269831|tetraspanin 12
mm9_v1_chr9_+_62225584_62225601	0.0411463	FOXD3.p2	AK166489|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm9_v1_chr3_-_51908927_51908997	0.0408295	FOXD3.p2	NM_001004176|Maml3|433586|mastermind like 3 (Drosophila)
mm9_v1_chr11_+_76220643_76220715	0.0408286	FOXD3.p2	NM_019818|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	NM_023355|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	BC055279|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK011745|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK012130|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK017389|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK028132|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK153837|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AF223950|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	BC022610|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)
mm9_v1_chr8_+_36740640_36740782	0.0405757	FOXD3.p2	AK010068|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr4_-_82151004_82151131	0.0405514	FOXD3.p2	BC062908|Nfib|18028|nuclear factor I/B	AK083167|Nfib|18028|nuclear factor I/B
mm9_v1_chr11_-_120410992_120411040	0.0404976	FOXD3.p2	BC025536|Fam195b|192173|family with sequence similarity 195, member B	AK147780|Fam195b|192173|family with sequence similarity 195, member B	NM_001033231|Fam195b|192173|family with sequence similarity 195, member B
mm9_v1_chr6_-_30340952_30341009	0.0404625	FOXD3.p2	BC037445|Zc3hc1|232679|zinc finger, C3HC type 1	AJ537495|Zc3hc1|232679|zinc finger, C3HC type 1	AK151694|Zc3hc1|232679|zinc finger, C3HC type 1	BC050141|Zc3hc1|232679|zinc finger, C3HC type 1	AK088527|Zc3hc1|232679|zinc finger, C3HC type 1	AK167465|Zc3hc1|232679|zinc finger, C3HC type 1	NM_172735|Zc3hc1|232679|zinc finger, C3HC type 1
mm9_v1_chr15_+_76174029_76174095	0.0402696	FOXD3.p2	AK192516|Cyc1|66445|cytochrome c-1
mm9_v1_chr18_+_61747381_61747495	0.0401899	FOXD3.p2	AK217508|Csnk1a1|93687|casein kinase 1, alpha 1	AK218260|Csnk1a1|93687|casein kinase 1, alpha 1	AK211333|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr1_+_178744942_178745053	0.0401597	FOXD3.p2	NM_029756|Sdccag8|76816|serologically defined colon cancer antigen 8	AK136921|Sdccag8|76816|serologically defined colon cancer antigen 8	AK051683|Sdccag8|76816|serologically defined colon cancer antigen 8	AK132316|Sdccag8|76816|serologically defined colon cancer antigen 8	AK012392|Sdccag8|76816|serologically defined colon cancer antigen 8	AK017691|Sdccag8|76816|serologically defined colon cancer antigen 8	BC016244|Sdccag8|76816|serologically defined colon cancer antigen 8	BC025138|Sdccag8|76816|serologically defined colon cancer antigen 8	AK133622|Sdccag8|76816|serologically defined colon cancer antigen 8
mm9_v1_chr4_-_133101912_133101941	0.0401481	FOXD3.p2	NM_010948|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)
mm9_v1_chr14_-_75530687_75530723	0.040091	FOXD3.p2	BC145796|Lrrc63|70859|leucine rich repeat containing 63	NM_027581|Lrrc63|70859|leucine rich repeat containing 63
mm9_v1_chr12_+_85758189_85758266	0.0400002	FOXD3.p2	AK016795|Rnf113a2|66381|ring finger protein 113A2	BC116426|Rnf113a2|66381|ring finger protein 113A2	BC058194|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr4_-_142889312_142889356	0.0399869	FOXD3.p2	M73748|Pdpn|14726|podoplanin	BC026551|Pdpn|14726|podoplanin
mm9_v1_chr10_+_75931622_75931715	0.0399689	FOXD3.p2	AK122313|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AJ006590|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AK051901|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	BC052452|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	NM_019434|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein
mm9_v1_chr1_+_122499031_122499257	0.039953	FOXD3.p2	NM_010133|En1|13798|engrailed 1	AK140408|En1|13798|engrailed 1	L12703|En1|13798|engrailed 1
mm9_v1_chrX_-_73120485_73120524	0.0399462	FOXD3.p2	AK165540|Pls3|102866|plastin 3 (T-isoform)	NM_001166453|Pls3|102866|plastin 3 (T-isoform)
mm9_v1_chr2_+_80171439_80171527	0.0398361	FOXD3.p2	AK190686|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK204346|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK206826|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	BC002207|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10
mm9_v1_chr2_+_58607580_58607600	0.0398033	FOXD3.p2	AY152393|Upp2|76654|uridine phosphorylase 2	NM_029692|Upp2|76654|uridine phosphorylase 2	AK149444|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr1_+_78654399_78654472	0.0397721	FOXD3.p2	AK161708|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_001001981|Utp14b|195434|UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)	NM_001033606|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_001136222|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_028817|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK012088|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK160839|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK166723|Acsl3|74205|acyl-CoA synthetase long-chain family member 3
mm9_v1_chr4_-_21694324_21694364	0.0397455	FOXD3.p2	AK154853|2610029I01Rik|77032|RIKEN cDNA 2610029I01 gene	NM_029840|2610029I01Rik|77032|RIKEN cDNA 2610029I01 gene
mm9_v1_chr9_+_74899844_74899963	0.0397249	FOXD3.p2	AK078740|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr7_+_25247448_25247518	0.0396962	FOXD3.p2	AK002580|Plaur|18793|plasminogen activator, urokinase receptor	AK144796|Plaur|18793|plasminogen activator, urokinase receptor	AK154141|Plaur|18793|plasminogen activator, urokinase receptor	AK131951|Plaur|18793|plasminogen activator, urokinase receptor	AK146827|Plaur|18793|plasminogen activator, urokinase receptor	AK155351|Plaur|18793|plasminogen activator, urokinase receptor	BC010309|Plaur|18793|plasminogen activator, urokinase receptor	NM_011113|Plaur|18793|plasminogen activator, urokinase receptor	X62700|Plaur|18793|plasminogen activator, urokinase receptor	X62701|Plaur|18793|plasminogen activator, urokinase receptor
mm9_v1_chr9_-_56008595_56008764	0.039621	FOXD3.p2	AK089494|Tspan3|56434|tetraspanin 3	AK154919|Tspan3|56434|tetraspanin 3	AB009021|Tspan3|56434|tetraspanin 3	AF133427|Tspan3|56434|tetraspanin 3	AB072450|Tspan3|56434|tetraspanin 3	AK053325|Tspan3|56434|tetraspanin 3	AK141951|Tspan3|56434|tetraspanin 3	AK006798|Tspan3|56434|tetraspanin 3	AK152175|Tspan3|56434|tetraspanin 3
mm9_v1_chr1_-_34876794_34876809	0.0395996	FOXD3.p2	AK180629|Fam168b|214469|family with sequence similarity 168, member B
mm9_v1_chr5_-_44485951_44486006	0.0394873	FOXD3.p2	AF305215|Prom1|19126|prominin 1	AY099088|Prom1|19126|prominin 1	AY223521|Prom1|19126|prominin 1	AY223522|Prom1|19126|prominin 1	NM_001163578|Prom1|19126|prominin 1	NM_001163581|Prom1|19126|prominin 1	NM_001163582|Prom1|19126|prominin 1	NM_001163583|Prom1|19126|prominin 1	NM_001163584|Prom1|19126|prominin 1	NM_001163585|Prom1|19126|prominin 1
mm9_v1_chrX_-_100678555_100678592	0.03937	FOXD3.p2	L04961|Xist|213742|inactive X specific transcripts	AK002727|Xist|213742|inactive X specific transcripts
mm9_v1_chr14_+_22569802_22569824	0.0392944	FOXD3.p2	AK075749|Samd8|67630|sterile alpha motif domain containing 8
mm9_v1_chr5_-_4104696_4104696	0.0391243	FOXD3.p2	NM_020010|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr4_+_13711928_13711928	0.0390913	FOXD3.p2	D32007|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_009822|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr10_-_75322941_75323054	0.0390811	FOXD3.p2	AK010691|Mif|17319|macrophage migration inhibitory factor	BC086928|Mif|17319|macrophage migration inhibitory factor	BC100605|Mif|17319|macrophage migration inhibitory factor	L02913|Mif|17319|macrophage migration inhibitory factor	AK152211|Mif|17319|macrophage migration inhibitory factor	BC024895|Mif|17319|macrophage migration inhibitory factor	L10613|Mif|17319|macrophage migration inhibitory factor	AK008939|Mif|17319|macrophage migration inhibitory factor	AK013328|Mif|17319|macrophage migration inhibitory factor	NM_010798|Mif|17319|macrophage migration inhibitory factor
mm9_v1_chr1_+_133049757_133049907	0.0388936	FOXD3.p2	AK170252|Eif2d|16865|eukaryotic translation initiation factor 2D	AK082748|Eif2d|16865|eukaryotic translation initiation factor 2D	AK030312|Eif2d|16865|eukaryotic translation initiation factor 2D	AK046539|Eif2d|16865|eukaryotic translation initiation factor 2D	AK166085|Eif2d|16865|eukaryotic translation initiation factor 2D	AK170448|Eif2d|16865|eukaryotic translation initiation factor 2D	AK139052|Eif2d|16865|eukaryotic translation initiation factor 2D	NM_001136070|Eif2d|16865|eukaryotic translation initiation factor 2D	NM_010709|Eif2d|16865|eukaryotic translation initiation factor 2D	AK078472|Eif2d|16865|eukaryotic translation initiation factor 2D	BC023709|Eif2d|16865|eukaryotic translation initiation factor 2D	AK036154|Eif2d|16865|eukaryotic translation initiation factor 2D	AK047005|Eif2d|16865|eukaryotic translation initiation factor 2D	AK167980|Eif2d|16865|eukaryotic translation initiation factor 2D	AK161269|Eif2d|16865|eukaryotic translation initiation factor 2D	AK171115|Eif2d|16865|eukaryotic translation initiation factor 2D	AK034115|Eif2d|16865|eukaryotic translation initiation factor 2D	AK168120|Eif2d|16865|eukaryotic translation initiation factor 2D	AK083638|Eif2d|16865|eukaryotic translation initiation factor 2D	BC025036|Eif2d|16865|eukaryotic translation initiation factor 2D	AK193013|Eif2d|16865|eukaryotic translation initiation factor 2D	U58337|Eif2d|16865|eukaryotic translation initiation factor 2D
mm9_v1_chr17_-_25933867_25933930	0.038676	FOXD3.p2	BC008695|Metrn|70083|meteorin, glial cell differentiation regulator	BC037181|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133462|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133463|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133464|Metrn|70083|meteorin, glial cell differentiation regulator	AK007688|Metrn|70083|meteorin, glial cell differentiation regulator
mm9_v1_chr1_-_194956399_194956457	0.0385542	FOXD3.p2	AK088756|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK147251|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK052355|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	NM_145415|Diexf|215193|digestive organ expansion factor homolog (zebrafish)
mm9_v1_chr17_-_56175896_56176097	0.0384926	FOXD3.p2	AK162715|Sh3gl1|20405|SH3-domain GRB2-like 1	BC138602|Sh3gl1|20405|SH3-domain GRB2-like 1	BC138603|Sh3gl1|20405|SH3-domain GRB2-like 1	BC145345|Sh3gl1|20405|SH3-domain GRB2-like 1	NM_013664|Sh3gl1|20405|SH3-domain GRB2-like 1	U58885|Sh3gl1|20405|SH3-domain GRB2-like 1	AK167505|Sh3gl1|20405|SH3-domain GRB2-like 1	AK154836|Sh3gl1|20405|SH3-domain GRB2-like 1
mm9_v1_chr13_+_98011057_98011069	0.0384563	FOXD3.p2	AK132173|Enc1|13803|ectodermal-neural cortex 1	NM_007930|Enc1|13803|ectodermal-neural cortex 1	AK044906|Enc1|13803|ectodermal-neural cortex 1	AK049187|Enc1|13803|ectodermal-neural cortex 1
mm9_v1_chr9_+_106105422_106105590	0.0383974	FOXD3.p2	AK084026|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_011876|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK155204|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK166900|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC003338|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK170441|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK157886|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	Y17808|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AY267189|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)
mm9_v1_chr5_+_149114763_149114791	0.0383638	FOXD3.p2	AK019985|Mtus2|77521|microtubule associated tumor suppressor candidate 2
mm9_v1_chr6_+_47870566_47870709	0.0383257	FOXD3.p2	NM_001145881|Zfp212|232784|Zinc finger protein 212	NM_145576|Zfp212|232784|Zinc finger protein 212	BC088737|Zfp212|232784|Zinc finger protein 212	BC006693|Zfp212|232784|Zinc finger protein 212	AK129476|Zfp212|232784|Zinc finger protein 212
mm9_v1_chr5_+_65522325_65522469	0.0381565	FOXD3.p2	BC057606|Klhl5|71778|kelch-like 5 (Drosophila)	NM_175174|Klhl5|71778|kelch-like 5 (Drosophila)
mm9_v1_chr11_-_69730589_69730837	0.0381273	FOXD3.p2	AK207553|Eif5a|276770|eukaryotic translation initiation factor 5A	AK211666|Eif5a|276770|eukaryotic translation initiation factor 5A	AK217079|Eif5a|276770|eukaryotic translation initiation factor 5A	AK189636|Eif5a|276770|eukaryotic translation initiation factor 5A	AK201607|Eif5a|276770|eukaryotic translation initiation factor 5A	AK213375|Eif5a|276770|eukaryotic translation initiation factor 5A	AK218644|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr6_-_97409251_97409295	0.0381138	FOXD3.p2	AK129262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr9_+_72584532_72584702	0.0379655	FOXD3.p2	BC007184|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr1_-_137001804_137001852	0.0378445	FOXD3.p2	BC141210|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6	AK085901|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6	AK137380|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6	NM_001033409|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6
mm9_v1_chr2_-_25110892_25110940	0.037595	FOXD3.p2	BC049789|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK163207|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK143124|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK169885|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK019617|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	NM_001082476|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1
mm9_v1_chr12_-_101397818_101397862	0.0375914	FOXD3.p2	AK036688|BC002230|217827|cDNA sequence BC002230	AK032800|BC002230|217827|cDNA sequence BC002230	NM_183155|BC002230|217827|cDNA sequence BC002230
mm9_v1_chr6_-_116532961_116533048	0.037525	FOXD3.p2	NM_146446|Olfr215|258438|olfactory receptor 215	BC125561|Olfr215|258438|olfactory receptor 215	BC125563|Olfr215|258438|olfactory receptor 215
mm9_v1_chr7_-_52781502_52781637	0.0375103	FOXD3.p2	BC138485|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	BC138486|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK154697|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	X51829|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK167317|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK079339|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK136336|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	NM_008654|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A
mm9_v1_chr15_-_85642066_85642146	0.0370887	FOXD3.p2	BC025858|2210021J22Rik|72355|RIKEN cDNA 2210021J22 gene	NM_001164625|2210021J22Rik|72355|RIKEN cDNA 2210021J22 gene	NM_001164626|2210021J22Rik|72355|RIKEN cDNA 2210021J22 gene	NM_197998|2210021J22Rik|72355|RIKEN cDNA 2210021J22 gene
mm9_v1_chr9_+_107949197_107949310	0.0370735	FOXD3.p2	
mm9_v1_chr1_+_155756310_155756313	0.0370271	FOXD3.p2	AK146463|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK158643|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK159888|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK152497|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)
mm9_v1_chr15_-_81230497_81230519	0.0370151	FOXD3.p2	
mm9_v1_chr3_+_145587194_145587422	0.0370117	FOXD3.p2	AK171687|Bcl10|12042|B-cell leukemia/lymphoma 10	AK156890|Bcl10|12042|B-cell leukemia/lymphoma 10	AK076082|Bcl10|12042|B-cell leukemia/lymphoma 10	AK172158|Bcl10|12042|B-cell leukemia/lymphoma 10	BC003703|Bcl10|12042|B-cell leukemia/lymphoma 10	AK169126|Bcl10|12042|B-cell leukemia/lymphoma 10	AK146236|Bcl10|12042|B-cell leukemia/lymphoma 10	AK168084|Bcl10|12042|B-cell leukemia/lymphoma 10	AK150883|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152563|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152847|Bcl10|12042|B-cell leukemia/lymphoma 10	AF057701|Bcl10|12042|B-cell leukemia/lymphoma 10	AF100339|Bcl10|12042|B-cell leukemia/lymphoma 10	AF134396|Bcl10|12042|B-cell leukemia/lymphoma 10	NM_009740|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172007|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172009|Bcl10|12042|B-cell leukemia/lymphoma 10	AJ006289|Bcl10|12042|B-cell leukemia/lymphoma 10	BC024379|Bcl10|12042|B-cell leukemia/lymphoma 10	AK140179|Bcl10|12042|B-cell leukemia/lymphoma 10	AF127387|Bcl10|12042|B-cell leukemia/lymphoma 10
mm9_v1_chr16_+_45158943_45159161	0.0369539	FOXD3.p2	AK078877|Atg3|67841|autophagy-related 3 (yeast)	BC010809|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr3_-_27795287_27795289	0.0368653	FOXD3.p2	AK053134|Tmem212|208613|transmembrane protein 212	BC119391|Tmem212|208613|transmembrane protein 212	BC119393|Tmem212|208613|transmembrane protein 212	NM_001164437|Tmem212|208613|transmembrane protein 212
mm9_v1_chr3_+_68376289_68376313	0.036724	FOXD3.p2	NM_013928|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr15_-_78994753_78994921	0.0367168	FOXD3.p2	BC023356|Sox10|20665|SRY-box containing gene 10	BC051058|Sox10|20665|SRY-box containing gene 10	AK185165|Sox10|20665|SRY-box containing gene 10	AK193670|Sox10|20665|SRY-box containing gene 10	AK185297|Sox10|20665|SRY-box containing gene 10	BC025171|Sox10|20665|SRY-box containing gene 10	AK043220|Sox10|20665|SRY-box containing gene 10	U66141|Sox10|20665|SRY-box containing gene 10	AK042542|Sox10|20665|SRY-box containing gene 10	NM_011437|Sox10|20665|SRY-box containing gene 10
mm9_v1_chr8_+_73197262_73197338	0.0366901	FOXD3.p2	AK167784|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK089028|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ249439|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK010910|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK003847|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK143470|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr8_+_42416046_42416071	0.0366713	FOXD3.p2	AK040482|Pcm1|18536|pericentriolar material 1
mm9_v1_chr7_-_121419535_121419643	0.0366673	FOXD3.p2	AF060088|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	BC005762|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK135326|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK167689|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK137054|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK161611|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AJ272021|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK162277|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK162439|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AJ272019|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK144784|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK088673|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	NM_011965|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1
mm9_v1_chr19_-_6984541_6984611	0.0366165	FOXD3.p2	AK009858|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr7_-_100022714_100022747	0.036444	FOXD3.p2	BC066148|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene	AK154915|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene	AK014608|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene	DQ400346|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene	NM_001080995|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene
mm9_v1_chr5_+_93112640_93112650	0.0363986	FOXD3.p2	BC145113|Shroom3|27428|shroom family member 3
mm9_v1_chr18_+_76219111_76219147	0.0363039	FOXD3.p2	BC018187|Zbtb7c|207259|zinc finger and BTB domain containing 7C	AK156372|Zbtb7c|207259|zinc finger and BTB domain containing 7C
mm9_v1_chr8_+_3676454_3676539	0.0361857	FOXD3.p2	AK076212|Trappc5|66682|trafficking protein particle complex 5	NM_025701|Trappc5|66682|trafficking protein particle complex 5	AK003633|Trappc5|66682|trafficking protein particle complex 5	AK007989|Trappc5|66682|trafficking protein particle complex 5	AK171833|Trappc5|66682|trafficking protein particle complex 5	AK078451|Trappc5|66682|trafficking protein particle complex 5	BC049179|Trappc5|66682|trafficking protein particle complex 5
mm9_v1_chr10_+_42481292_42481301	0.0360795	FOXD3.p2	BC059816|Sec63|140740|SEC63-like (S. cerevisiae)	NM_153055|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr8_-_55606109_55606134	0.0360374	FOXD3.p2	AK051731|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)
mm9_v1_chr15_+_8918001_8918118	0.0359241	FOXD3.p2	AK048152|Ranbp3l|223332|RAN binding protein 3-like	AK132406|Ranbp3l|223332|RAN binding protein 3-like	BC058706|Ranbp3l|223332|RAN binding protein 3-like	NM_198024|Ranbp3l|223332|RAN binding protein 3-like
mm9_v1_chr6_-_131338282_131338457	0.0359188	FOXD3.p2	AF248546|Csda|56449|cold shock domain protein A	AF248547|Csda|56449|cold shock domain protein A	AF246224|Csda|56449|cold shock domain protein A	AK003145|Csda|56449|cold shock domain protein A	AK076041|Csda|56449|cold shock domain protein A	D14485|Csda|56449|cold shock domain protein A	BC048242|Csda|56449|cold shock domain protein A	BC062377|Csda|56449|cold shock domain protein A
mm9_v1_chr17_-_56256668_56256720	0.0358473	FOXD3.p2	AY919875|Plin5|66968|perilipin 5	NM_001077348|Plin5|66968|perilipin 5
mm9_v1_chr14_+_70167278_70167338	0.0358321	FOXD3.p2	AK050753|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	NM_020275|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK080069|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK145730|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK154993|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	BC065141|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AB031081|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b
mm9_v1_chr10_+_29033305_29033440	0.0357524	FOXD3.p2	NM_025855|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK145162|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK016260|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK166660|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK166589|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK166634|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK028775|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK006444|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	BC066183|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1
mm9_v1_chr8_+_87550720_87550841	0.0357365	FOXD3.p2	BC023284|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	BC029622|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	NM_026760|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	AK009653|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	AK003299|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene
mm9_v1_chr11_+_74584328_74584437	0.0357358	FOXD3.p2	AK013306|Mett10d|67493|methyltransferase 10 domain containing	BC022902|Mett10d|67493|methyltransferase 10 domain containing	AK145022|Mett10d|67493|methyltransferase 10 domain containing	AK011780|Mett10d|67493|methyltransferase 10 domain containing	AK012739|Mett10d|67493|methyltransferase 10 domain containing	NM_026197|Mett10d|67493|methyltransferase 10 domain containing	AK145662|Mett10d|67493|methyltransferase 10 domain containing	AK029045|Mett10d|67493|methyltransferase 10 domain containing	AK161574|Mett10d|67493|methyltransferase 10 domain containing	BC003467|Mett10d|67493|methyltransferase 10 domain containing	AK168798|Mett10d|67493|methyltransferase 10 domain containing	BC037452|Mett10d|67493|methyltransferase 10 domain containing	BC054724|Mett10d|67493|methyltransferase 10 domain containing	BC049897|Mett10d|67493|methyltransferase 10 domain containing
mm9_v1_chr6_+_38484796_38484868	0.0357208	FOXD3.p2	AK003231|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	BC059710|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	AK008291|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	NM_025363|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	AK009186|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene
mm9_v1_chr8_+_86521498_86521570	0.0356025	FOXD3.p2	NM_001081415|Samd1|666704|sterile alpha motif domain containing 1
mm9_v1_chrX_+_106290703_106290922	0.0355071	FOXD3.p2	BC043055|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	NM_019989|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK218315|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	BC034161|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151871|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK165995|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK146588|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK150604|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151095|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK049929|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151501|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AJ272504|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like
mm9_v1_chrX_-_43809499_43809524	0.0354913	FOXD3.p2	NM_001085510|Gm4987|245405|predicted gene 4987
mm9_v1_chr10_-_122513438_122513438	0.0354487	FOXD3.p2	AK161217|Mon2|67074|MON2 homolog (yeast)
mm9_v1_chr11_+_11586215_11586246	0.0354444	FOXD3.p2	NM_001025597|Ikzf1|22778|IKAROS family zinc finger 1	NM_009578|Ikzf1|22778|IKAROS family zinc finger 1	AK036833|Ikzf1|22778|IKAROS family zinc finger 1	AK040268|Ikzf1|22778|IKAROS family zinc finger 1
mm9_v1_chr17_-_35325354_35325410	0.035373	FOXD3.p2	U72643|Lst1|16988|leukocyte specific transcript 1	U72644|Lst1|16988|leukocyte specific transcript 1	AF000428|Lst1|16988|leukocyte specific transcript 1	BC086881|Lst1|16988|leukocyte specific transcript 1	M18187|Lst1|16988|leukocyte specific transcript 1	NM_010734|Lst1|16988|leukocyte specific transcript 1	AF000427|Lst1|16988|leukocyte specific transcript 1
mm9_v1_chr18_-_61008391_61008636	0.0353004	FOXD3.p2	U81030|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	AF001794|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC057342|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC060105|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC046608|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC052669|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	AK089518|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC021514|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	NM_001198984|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	NM_011552|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog
mm9_v1_chr6_+_108163089_108163111	0.0352981	FOXD3.p2	AK047719|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	AK137477|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	NM_010585|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	X15373|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1
mm9_v1_chr8_+_113557991_113558130	0.035257	FOXD3.p2	AK044451|Aars|234734|alanyl-tRNA synthetase
mm9_v1_chr3_+_105261699_105261733	0.0352042	FOXD3.p2	BC141097|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	BC141098|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107781|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107782|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	NM_019931|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr10_-_128026556_128026720	0.03518	FOXD3.p2	AY686636|Erbb3|13867|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	NM_010153|Erbb3|13867|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	BC106091|Erbb3|13867|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)
mm9_v1_chr18_+_3383216_3383321	0.0351482	FOXD3.p2	AK004875|Cul2|71745|cullin 2	NM_029402|Cul2|71745|cullin 2	AK160597|Cul2|71745|cullin 2	AK220287|Cul2|71745|cullin 2	AK144693|Cul2|71745|cullin 2	AK028589|Cul2|71745|cullin 2	BC027428|Cul2|71745|cullin 2	BC026779|Cul2|71745|cullin 2
mm9_v1_chr17_+_26389892_26389910	0.0350083	FOXD3.p2	AK017655|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK007781|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK010539|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr8_-_26707934_26708016	0.0348124	FOXD3.p2	AK076546|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	BC055685|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	NM_173012|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK041725|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK031563|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK034050|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK050943|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK163507|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2
mm9_v1_chr17_+_32421723_32421761	0.0347814	FOXD3.p2	
mm9_v1_chr14_-_52780511_52780625	0.0346885	FOXD3.p2	AK082901|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)
mm9_v1_chr11_+_93747419_93747532	0.0346829	FOXD3.p2	AK153919|Mbtd1|103537|mbt domain containing 1	BC064014|Mbtd1|103537|mbt domain containing 1	BC062907|Mbtd1|103537|mbt domain containing 1	NM_134012|Mbtd1|103537|mbt domain containing 1
mm9_v1_chr12_-_87419813_87420026	0.0346574	FOXD3.p2	AK148385|Tgfb3|21809|transforming growth factor, beta 3	BC094591|Tgfb3|21809|transforming growth factor, beta 3	BC089347|Tgfb3|21809|transforming growth factor, beta 3	AK132519|Tgfb3|21809|transforming growth factor, beta 3	AK145304|Tgfb3|21809|transforming growth factor, beta 3	BC108426|Tgfb3|21809|transforming growth factor, beta 3	NM_009368|Tgfb3|21809|transforming growth factor, beta 3
mm9_v1_chr10_+_89280918_89280988	0.0346191	FOXD3.p2	AK079985|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK046432|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK008586|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like
mm9_v1_chr3_+_123045975_123046085	0.0346013	FOXD3.p2	BC038038|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)	BC049257|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)
mm9_v1_chr1_-_140071818_140071883	0.0345869	FOXD3.p2	BC131655|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK088215|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	BC028512|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M14342|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK154893|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK171802|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK054056|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_001111316|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_011210|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr4_-_14753720_14753733	0.0345745	FOXD3.p2	NM_152812|Otud6b|72201|OTU domain containing 6B
mm9_v1_chr3_-_95558736_95558899	0.0345491	FOXD3.p2	AK187935|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164825|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK088675|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC147501|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK011540|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC008995|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK168075|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK142685|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK080690|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164589|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163617|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163618|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163619|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_027931|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr10_-_90616085_90616118	0.0344879	FOXD3.p2	AK186132|Tmpo|21917|thymopoietin	AK199505|Tmpo|21917|thymopoietin
mm9_v1_chr13_+_59686693_59686787	0.0344386	FOXD3.p2	NM_030153|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC027201|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	AY102701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC043701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC056435|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm9_v1_chr3_-_30546739_30546790	0.0344309	FOXD3.p2	BC100519|Lrrc34|71827|leucine rich repeat containing 34	NM_027941|Lrrc34|71827|leucine rich repeat containing 34	AK005720|Lrrc34|71827|leucine rich repeat containing 34
mm9_v1_chr3_+_93324411_93324431	0.0343389	FOXD3.p2	AK164352|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)	NM_016740|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)	AK002490|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)	AK003889|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)	BC086903|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)
mm9_v1_chr7_-_72515798_72515900	0.0343246	FOXD3.p2	BC138028|Tjp1|21872|tight junction protein 1	BC145100|Tjp1|21872|tight junction protein 1
mm9_v1_chrX_-_7182450_7182545	0.0343231	FOXD3.p2	BC011195|Ccdc22|54638|coiled-coil domain containing 22	AK010536|Ccdc22|54638|coiled-coil domain containing 22	AF229637|Ccdc22|54638|coiled-coil domain containing 22	AK039573|Ccdc22|54638|coiled-coil domain containing 22	NM_138603|Ccdc22|54638|coiled-coil domain containing 22
mm9_v1_chr3_+_87723453_87723493	0.0343099	FOXD3.p2	AK003362|Mrpl24|67707|mitochondrial ribosomal protein L24	AK019976|Mrpl24|67707|mitochondrial ribosomal protein L24	AK020157|Mrpl24|67707|mitochondrial ribosomal protein L24	NM_026591|Mrpl24|67707|mitochondrial ribosomal protein L24	AK013394|Mrpl24|67707|mitochondrial ribosomal protein L24	AK016190|Mrpl24|67707|mitochondrial ribosomal protein L24	BC031730|Mrpl24|67707|mitochondrial ribosomal protein L24
mm9_v1_chr4_+_153349239_153349351	0.0342302	FOXD3.p2	AK143802|BC046331|230967|cDNA sequence BC046331	AK149826|BC046331|230967|cDNA sequence BC046331
mm9_v1_chr18_+_21119972_21120137	0.0342289	FOXD3.p2	AK016103|Rnf125|67664|ring finger protein 125	AB259692|Rnf125|67664|ring finger protein 125
mm9_v1_chr3_-_117571711_117571747	0.0341823	FOXD3.p2	BC087942|Snx7|76561|sorting nexin 7
mm9_v1_chr10_+_77085039_77085135	0.0341205	FOXD3.p2	AK154464|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AK146554|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	BC010321|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	NM_019803|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AK136365|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AF296657|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AK183367|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AK185288|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2
mm9_v1_chr11_-_79337178_79337240	0.0340977	FOXD3.p2	AK171686|Evi2b|216984|ecotropic viral integration site 2b	BC017548|Evi2b|216984|ecotropic viral integration site 2b	AK170476|Evi2b|216984|ecotropic viral integration site 2b	AK039968|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr18_+_37915375_37915594	0.0340612	FOXD3.p2	BC064675|Pcdhga11|93723|protocadherin gamma subfamily A, 11	NM_033594|Pcdhga11|93723|protocadherin gamma subfamily A, 11	BC059837|Pcdhga11|93723|protocadherin gamma subfamily A, 11	AY013794|Pcdhga11|93723|protocadherin gamma subfamily A, 11
mm9_v1_chr1_+_179374783_179374796	0.0340222	FOXD3.p2	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chrX_-_57400778_57400876	0.0339973	FOXD3.p2	BC125435|Mcf2|109904|mcf.2 transforming sequence	AB052945|Mcf2|109904|mcf.2 transforming sequence	AB101616|Mcf2|109904|mcf.2 transforming sequence	NM_133197|Mcf2|109904|mcf.2 transforming sequence	AK032122|Mcf2|109904|mcf.2 transforming sequence
mm9_v1_chr5_+_135582754_135582797	0.0339194	FOXD3.p2	AK143999|Mlxipl|58805|MLX interacting protein-like	AK143800|Mlxipl|58805|MLX interacting protein-like	AF245475|Mlxipl|58805|MLX interacting protein-like	AF245476|Mlxipl|58805|MLX interacting protein-like	AF245477|Mlxipl|58805|MLX interacting protein-like	AF245478|Mlxipl|58805|MLX interacting protein-like	AF245479|Mlxipl|58805|MLX interacting protein-like	NM_021455|Mlxipl|58805|MLX interacting protein-like	AF156604|Mlxipl|58805|MLX interacting protein-like	BC064053|Mlxipl|58805|MLX interacting protein-like
mm9_v1_chr5_-_52576002_52576142	0.0339128	FOXD3.p2	
mm9_v1_chr15_-_102087673_102087947	0.033811	FOXD3.p2	M34476|Rarg|19411|retinoic acid receptor, gamma	X15848|Rarg|19411|retinoic acid receptor, gamma	M32068|Rarg|19411|retinoic acid receptor, gamma	BC012923|Rarg|19411|retinoic acid receptor, gamma	NM_011244|Rarg|19411|retinoic acid receptor, gamma	AK148064|Rarg|19411|retinoic acid receptor, gamma
mm9_v1_chr18_+_69843588_69843609	0.0337522	FOXD3.p2	AK017365|Tcf4|21413|transcription factor 4
mm9_v1_chr4_+_15211137_15211173	0.0336136	FOXD3.p2	AK162736|Tmem64|100201|transmembrane protein 64
mm9_v1_chr5_+_116009475_116009502	0.0336024	FOXD3.p2	NM_007475|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr7_-_20355880_20355889	0.0332728	FOXD3.p2	AF109160|Bcam|57278|basal cell adhesion molecule	NM_020486|Bcam|57278|basal cell adhesion molecule
mm9_v1_chr3_+_94217197_94217322	0.0331749	FOXD3.p2	BC057030|Tdrkh|72634|tudor and KH domain containing protein	BC031886|Tdrkh|72634|tudor and KH domain containing protein	BC049363|Tdrkh|72634|tudor and KH domain containing protein	NM_028307|Tdrkh|72634|tudor and KH domain containing protein
mm9_v1_chr14_-_57397125_57397185	0.0331587	FOXD3.p2	BC026772|Pspc1|66645|paraspeckle protein 1	AK011272|Pspc1|66645|paraspeckle protein 1	AK017689|Pspc1|66645|paraspeckle protein 1	AK150823|Pspc1|66645|paraspeckle protein 1	AK160722|Pspc1|66645|paraspeckle protein 1	NM_025682|Pspc1|66645|paraspeckle protein 1
mm9_v1_chr17_-_45708739_45708860	0.0331481	FOXD3.p2	AK177268|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK178129|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK179913|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK180968|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK190429|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196204|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK218770|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr11_-_106646226_106646242	0.0330998	FOXD3.p2	AK013106|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr7_+_148068262_148068416	0.0330046	FOXD3.p2	AK075936|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	NM_011875|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK081160|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK163017|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK051078|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK167169|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK171504|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC139184|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC139187|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK145654|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AF107838|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC029989|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK206994|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm9_v1_chr1_+_51345952_51345993	0.0328857	FOXD3.p2	AK035324|Sdpr|20324|serum deprivation response	BC027005|Sdpr|20324|serum deprivation response	NM_138741|Sdpr|20324|serum deprivation response	AK132324|Sdpr|20324|serum deprivation response
mm9_v1_chr5_+_32761533_32761558	0.0327103	FOXD3.p2	AK147112|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK157914|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr9_-_119977358_119977413	0.032549	FOXD3.p2	BC012653|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK035902|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK140010|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AF102269|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	NM_009987|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK045634|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK137388|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK044557|Cx3cr1|13051|chemokine (C-X3-C) receptor 1
mm9_v1_chr15_-_96471920_96471958	0.032498	FOXD3.p2	AK047459|Slc38a1|105727|solute carrier family 38, member 1	AK165188|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr15_-_8660393_8660418	0.0324165	FOXD3.p2	BC028638|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC066154|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK045716|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr6_+_124915623_124915638	0.0324078	FOXD3.p2	
mm9_v1_chr3_+_87723411_87723427	0.0324033	FOXD3.p2	AK167623|Mrpl24|67707|mitochondrial ribosomal protein L24
mm9_v1_chr17_-_5440223_5440262	0.0323987	FOXD3.p2	BC019420|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK043276|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK158107|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK088025|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK155326|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK009851|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK017626|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK003559|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	NM_027457|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene
mm9_v1_chr14_+_120724380_120724561	0.0323236	FOXD3.p2	BC020406|Mbnl2|105559|muscleblind-like 2	BC026711|Mbnl2|105559|muscleblind-like 2	GQ906534|Mbnl2|105559|muscleblind-like 2	AK216404|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr17_-_24664759_24664833	0.032265	FOXD3.p2	BC008598|Traf7|224619|TNF receptor-associated factor 7	AK088431|Traf7|224619|TNF receptor-associated factor 7	AK131617|Traf7|224619|TNF receptor-associated factor 7
mm9_v1_chr19_+_9092973_9093058	0.0321369	FOXD3.p2	AK003448|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr5_-_134705423_134705497	0.0321291	FOXD3.p2	L11455|Ncf1|17969|neutrophil cytosolic factor 1	BC055836|Ncf1|17969|neutrophil cytosolic factor 1	AK152386|Ncf1|17969|neutrophil cytosolic factor 1	AK151593|Ncf1|17969|neutrophil cytosolic factor 1	AK149668|Ncf1|17969|neutrophil cytosolic factor 1	AK171559|Ncf1|17969|neutrophil cytosolic factor 1	AK150945|Ncf1|17969|neutrophil cytosolic factor 1	AK151316|Ncf1|17969|neutrophil cytosolic factor 1	AK152992|Ncf1|17969|neutrophil cytosolic factor 1	AK162308|Ncf1|17969|neutrophil cytosolic factor 1	AK162623|Ncf1|17969|neutrophil cytosolic factor 1	AK170462|Ncf1|17969|neutrophil cytosolic factor 1	AB002663|Ncf1|17969|neutrophil cytosolic factor 1	AK149619|Ncf1|17969|neutrophil cytosolic factor 1	AK149732|Ncf1|17969|neutrophil cytosolic factor 1	NM_010876|Ncf1|17969|neutrophil cytosolic factor 1
mm9_v1_chr6_+_126889979_126890004	0.0319849	FOXD3.p2	AK037095|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK045541|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	NM_138594|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK043521|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK137201|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK042976|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK046707|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed
mm9_v1_chr12_+_60230704_60230799	0.0317303	FOXD3.p2	NM_001165254|Ctage5|217615|CTAGE family, member 5	NM_146034|Ctage5|217615|CTAGE family, member 5	AK029466|Ctage5|217615|CTAGE family, member 5	AK080312|Ctage5|217615|CTAGE family, member 5	BC026864|Ctage5|217615|CTAGE family, member 5	AK087188|Ctage5|217615|CTAGE family, member 5	AK053010|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr9_+_26807281_26807337	0.0316777	FOXD3.p2	AK021335|Thyn1|77862|thymocyte nuclear protein 1	AK077639|Thyn1|77862|thymocyte nuclear protein 1	BC016594|Thyn1|77862|thymocyte nuclear protein 1	AB080370|Thyn1|77862|thymocyte nuclear protein 1
mm9_v1_chr14_+_73909826_73909861	0.0314568	FOXD3.p2	AK145636|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK078288|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK010270|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK010686|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	BC024950|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	NM_026119|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)
mm9_v1_chr2_+_117075473_117075485	0.0311448	FOXD3.p2	AK019190|Fam98b|68215|family with sequence similarity 98, member B	AK019253|Fam98b|68215|family with sequence similarity 98, member B	AK039305|Fam98b|68215|family with sequence similarity 98, member B	NM_026620|Fam98b|68215|family with sequence similarity 98, member B	BC048087|Fam98b|68215|family with sequence similarity 98, member B
mm9_v1_chr8_+_106774774_106774855	0.0309702	FOXD3.p2	AK005577|Cklf|75458|chemokine-like factor	AY046597|Cklf|75458|chemokine-like factor	NM_029295|Cklf|75458|chemokine-like factor	AK046397|Cklf|75458|chemokine-like factor	AK086063|Cklf|75458|chemokine-like factor	AK032759|Cklf|75458|chemokine-like factor	AK050112|Cklf|75458|chemokine-like factor	NM_001037841|Cklf|75458|chemokine-like factor	BC027684|Cklf|75458|chemokine-like factor	AF401530|Cklf|75458|chemokine-like factor	AF401531|Cklf|75458|chemokine-like factor	AY047360|Cklf|75458|chemokine-like factor
mm9_v1_chr2_-_151805954_151805955	0.0309386	FOXD3.p2	NM_146127|Fam110a|73847|family with sequence similarity 110, member A
mm9_v1_chr7_-_38804503_38804582	0.0309164	FOXD3.p2	AK160558|C80913|19777|expressed sequence C80913	AK155994|C80913|19777|expressed sequence C80913	AK166566|C80913|19777|expressed sequence C80913	AK170929|C80913|19777|expressed sequence C80913	NM_011274|C80913|19777|expressed sequence C80913
mm9_v1_chr3_-_104621424_104621520	0.0307496	FOXD3.p2	AK159295|Mov10|17454|Moloney leukemia virus 10	NM_001163440|Mov10|17454|Moloney leukemia virus 10
mm9_v1_chr2_-_77357674_77357722	0.0306132	FOXD3.p2	AK078551|Zfp385b|241494|zinc finger protein 385B	AK050293|Zfp385b|241494|zinc finger protein 385B	NM_001113400|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr19_-_5912757_5912865	0.0305192	FOXD3.p2	U10435|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK215194|Dpf2|19708|D4, zinc and double PHD fingers family 2	BC012709|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK138047|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144848|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK019051|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144106|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK004812|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144954|Dpf2|19708|D4, zinc and double PHD fingers family 2	U43921|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK145851|Dpf2|19708|D4, zinc and double PHD fingers family 2	NM_011262|Dpf2|19708|D4, zinc and double PHD fingers family 2
mm9_v1_chr16_-_75766992_75767062	0.0304909	FOXD3.p2	BC039701|Hspa13|110920|heat shock protein 70 family, member 13	AK167839|Hspa13|110920|heat shock protein 70 family, member 13	BC094508|Hspa13|110920|heat shock protein 70 family, member 13	BC085181|Hspa13|110920|heat shock protein 70 family, member 13	AK049011|Hspa13|110920|heat shock protein 70 family, member 13	AK021006|Hspa13|110920|heat shock protein 70 family, member 13	AK030553|Hspa13|110920|heat shock protein 70 family, member 13	AK034643|Hspa13|110920|heat shock protein 70 family, member 13	NM_030201|Hspa13|110920|heat shock protein 70 family, member 13
mm9_v1_chr4_-_98049833_98049960	0.0304789	FOXD3.p2	AK216092|Tm2d1|94043|TM2 domain containing 1	AF353993|Tm2d1|94043|TM2 domain containing 1	AK009511|Tm2d1|94043|TM2 domain containing 1	BC089492|Tm2d1|94043|TM2 domain containing 1	NM_053157|Tm2d1|94043|TM2 domain containing 1
mm9_v1_chrX_+_54043764_54043779	0.0304358	FOXD3.p2	BC055725|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr16_-_10543121_10543218	0.0303152	FOXD3.p2	BC017551|Dexi|58239|dexamethasone-induced transcript	AK007644|Dexi|58239|dexamethasone-induced transcript	AK032104|Dexi|58239|dexamethasone-induced transcript	NM_021428|Dexi|58239|dexamethasone-induced transcript
mm9_v1_chr7_+_137836057_137836069	0.0302388	FOXD3.p2	AB041546|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	NM_021314|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr14_+_32454236_32454303	0.0302352	FOXD3.p2	NM_025295|Btd|26363|biotinidase	AK005506|Btd|26363|biotinidase	AK135375|Btd|26363|biotinidase	BC024051|Btd|26363|biotinidase
mm9_v1_chr8_-_88063071_88063191	0.0302069	FOXD3.p2	
mm9_v1_chr1_+_166081951_166082088	0.030095	FOXD3.p2	AK137521|F5|14067|coagulation factor V	AK139240|F5|14067|coagulation factor V	AK137537|F5|14067|coagulation factor V	NM_007976|F5|14067|coagulation factor V	U52925|F5|14067|coagulation factor V
mm9_v1_chr10_+_79620689_79620701	0.0299524	FOXD3.p2	AK013865|Midn|59090|midnolin
mm9_v1_chr8_+_130883151_130883243	0.0298948	FOXD3.p2	AK040447|Nrp1|18186|neuropilin 1	AK030358|Nrp1|18186|neuropilin 1	BC038657|Nrp1|18186|neuropilin 1	AK141964|Nrp1|18186|neuropilin 1	BC051447|Nrp1|18186|neuropilin 1	AK159219|Nrp1|18186|neuropilin 1	BC060129|Nrp1|18186|neuropilin 1
mm9_v1_chr17_-_45611774_45611886	0.0298781	FOXD3.p2	AY336501|Spats1|71020|spermatogenesis associated, serine-rich 1	AK016586|Spats1|71020|spermatogenesis associated, serine-rich 1	AK165435|Spats1|71020|spermatogenesis associated, serine-rich 1	BC131909|Spats1|71020|spermatogenesis associated, serine-rich 1	AK005865|Spats1|71020|spermatogenesis associated, serine-rich 1	NM_027649|Spats1|71020|spermatogenesis associated, serine-rich 1
mm9_v1_chr11_+_116295406_116295422	0.0298711	FOXD3.p2	AK144901|Fam100b|319370|family with sequence similarity 100, member B	NM_176902|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr6_+_79969636_79969636	0.0297366	FOXD3.p2	NM_178731|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chr4_-_20705698_20705814	0.0297325	FOXD3.p2	AK051427|Nkain3|269513|Na+/K+ transporting ATPase interacting 3	AK053823|Nkain3|269513|Na+/K+ transporting ATPase interacting 3	AK141456|Nkain3|269513|Na+/K+ transporting ATPase interacting 3	BC075683|Nkain3|269513|Na+/K+ transporting ATPase interacting 3	NM_172987|Nkain3|269513|Na+/K+ transporting ATPase interacting 3
mm9_v1_chr11_+_32105414_32105503	0.0297216	FOXD3.p2	AK019452|Snrnp25|78372|small nuclear ribonucleoprotein 25 (U11/U12)	NM_030093|Snrnp25|78372|small nuclear ribonucleoprotein 25 (U11/U12)	BC028766|Snrnp25|78372|small nuclear ribonucleoprotein 25 (U11/U12)
mm9_v1_chr12_-_72116562_72116603	0.0296415	FOXD3.p2	AK014224|3110056K07Rik|73204|RIKEN cDNA 3110056K07 gene	AK015004|3110056K07Rik|73204|RIKEN cDNA 3110056K07 gene	AK077771|3110056K07Rik|73204|RIKEN cDNA 3110056K07 gene
mm9_v1_chr5_-_136254107_136254254	0.0294889	FOXD3.p2	BC045148|Styxl1|76571|serine/threonine/tyrosine interacting-like 1	AK005858|Styxl1|76571|serine/threonine/tyrosine interacting-like 1	AK005599|Styxl1|76571|serine/threonine/tyrosine interacting-like 1	AK161310|Styxl1|76571|serine/threonine/tyrosine interacting-like 1	NM_029659|Styxl1|76571|serine/threonine/tyrosine interacting-like 1
mm9_v1_chr11_-_75161767_75161884	0.0294888	FOXD3.p2	AK177196|Rpa1|68275|replication protein A1	AK197958|Rpa1|68275|replication protein A1	AK203654|Rpa1|68275|replication protein A1	AK167598|Rpa1|68275|replication protein A1	AK150785|Rpa1|68275|replication protein A1	AK165316|Rpa1|68275|replication protein A1	BC019119|Rpa1|68275|replication protein A1	AK035084|Rpa1|68275|replication protein A1	AK152296|Rpa1|68275|replication protein A1	AK153107|Rpa1|68275|replication protein A1	AK165944|Rpa1|68275|replication protein A1	AK169599|Rpa1|68275|replication protein A1	AK148035|Rpa1|68275|replication protein A1	AK168400|Rpa1|68275|replication protein A1	AK151590|Rpa1|68275|replication protein A1	AK153144|Rpa1|68275|replication protein A1	NM_001164223|Rpa1|68275|replication protein A1	NM_026653|Rpa1|68275|replication protein A1
mm9_v1_chr3_+_89234339_89234606	0.0294187	FOXD3.p2	BC025640|Pygo2|68911|pygopus 2	AK209495|Pygo2|68911|pygopus 2
mm9_v1_chr7_-_133929571_133929602	0.0293312	FOXD3.p2	AK211564|Ppp4c|56420|protein phosphatase 4, catalytic subunit
mm9_v1_chr2_-_62249869_62249878	0.0293141	FOXD3.p2	AK085370|Dpp4|13482|dipeptidylpeptidase 4	AK164775|Dpp4|13482|dipeptidylpeptidase 4
mm9_v1_chr1_+_120285634_120285634	0.0292503	FOXD3.p2	AK042402|Clasp1|76707|CLIP associating protein 1	NM_001081276|Clasp1|76707|CLIP associating protein 1	NM_029709|Clasp1|76707|CLIP associating protein 1	NM_177548|Clasp1|76707|CLIP associating protein 1
mm9_v1_chr9_-_63869857_63869865	0.0292289	FOXD3.p2	AK046602|Smad6|17130|MAD homolog 6 (Drosophila)	NM_008542|Smad6|17130|MAD homolog 6 (Drosophila)
mm9_v1_chr16_-_36666078_36666195	0.0291791	FOXD3.p2	AF065897|Cd86|12524|CD86 antigen	AF065898|Cd86|12524|CD86 antigen	AF065899|Cd86|12524|CD86 antigen	AF065900|Cd86|12524|CD86 antigen	S70108|Cd86|12524|CD86 antigen	BC013807|Cd86|12524|CD86 antigen	L25606|Cd86|12524|CD86 antigen	AK079513|Cd86|12524|CD86 antigen	AK155710|Cd86|12524|CD86 antigen	AK170054|Cd86|12524|CD86 antigen	NM_019388|Cd86|12524|CD86 antigen	AK172548|Cd86|12524|CD86 antigen	AK172686|Cd86|12524|CD86 antigen
mm9_v1_chr4_+_126530769_126530837	0.0291189	FOXD3.p2	
mm9_v1_chr18_-_55149819_55149833	0.0290985	FOXD3.p2	AK051334|Zfp608|269023|zinc finger protein 608	NM_175751|Zfp608|269023|zinc finger protein 608
mm9_v1_chr2_+_124436328_124436346	0.0290331	FOXD3.p2	AK084922|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AK031307|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr9_-_95390211_95390302	0.028952	FOXD3.p2	AK179363|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene
mm9_v1_chr17_-_45705198_45705339	0.0288512	FOXD3.p2	AK192311|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chrX_-_154036557_154036600	0.0287055	FOXD3.p2	BC038343|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK036071|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK164486|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK047841|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr2_-_5816330_5816380	0.0285499	FOXD3.p2	AF145254|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AF222748|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	BC005458|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK017615|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK136447|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr16_-_5013596_5013670	0.0284861	FOXD3.p2	AK046477|Rogdi|66049|rogdi homolog (Drosophila)	AK170144|Rogdi|66049|rogdi homolog (Drosophila)	AY036117|Rogdi|66049|rogdi homolog (Drosophila)	BC006914|Rogdi|66049|rogdi homolog (Drosophila)	AK002523|Rogdi|66049|rogdi homolog (Drosophila)	NM_133185|Rogdi|66049|rogdi homolog (Drosophila)
mm9_v1_chr6_+_121250304_121250325	0.0284804	FOXD3.p2	AK149557|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK002794|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK078399|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC029637|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_144512|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC023117|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
mm9_v1_chr5_-_121062483_121062618	0.0284714	FOXD3.p2	BC021365|1110008J03Rik|100764|RIKEN cDNA 1110008J03 gene	AK003581|1110008J03Rik|100764|RIKEN cDNA 1110008J03 gene	NM_029096|1110008J03Rik|100764|RIKEN cDNA 1110008J03 gene	NM_133908|1110008J03Rik|100764|RIKEN cDNA 1110008J03 gene
mm9_v1_chr19_-_39815590_39815597	0.0284493	FOXD3.p2	NM_001039555|Cyp2c68|433247|cytochrome P450, family 2, subfamily c, polypeptide 68
mm9_v1_chr3_-_94937886_94937954	0.0284489	FOXD3.p2	BC028867|Scnm1|69269|sodium channel modifier 1	AK013948|Scnm1|69269|sodium channel modifier 1	NM_001163573|Scnm1|69269|sodium channel modifier 1	NM_027013|Scnm1|69269|sodium channel modifier 1
mm9_v1_chr9_-_44610921_44611015	0.0284417	FOXD3.p2	BC021608|Ttc36|192653|tetratricopeptide repeat domain 36	AK165811|Ttc36|192653|tetratricopeptide repeat domain 36	BC026825|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr1_-_163061538_163061643	0.0283985	FOXD3.p2	BC060183|Klhl20|226541|kelch-like 20 (Drosophila)	AK053102|Klhl20|226541|kelch-like 20 (Drosophila)	AK053371|Klhl20|226541|kelch-like 20 (Drosophila)	AK054169|Klhl20|226541|kelch-like 20 (Drosophila)	BC019571|Klhl20|226541|kelch-like 20 (Drosophila)	AK220547|Klhl20|226541|kelch-like 20 (Drosophila)	NM_001039482|Klhl20|226541|kelch-like 20 (Drosophila)
mm9_v1_chr15_+_9001154_9001214	0.0283628	FOXD3.p2	BC115776|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr17_+_56850731_56850957	0.0283388	FOXD3.p2	AK204937|Ranbp3|71810|RAN binding protein 3
mm9_v1_chr15_-_98373055_98373058	0.0282417	FOXD3.p2	AK085131|Ccnt1|12455|cyclin T1	AK052836|Ccnt1|12455|cyclin T1
mm9_v1_chr9_+_120019521_120019545	0.0281908	FOXD3.p2	AK167737|Slc25a38|208638|solute carrier family 25, member 38
mm9_v1_chr9_-_7837059_7837079	0.0281766	FOXD3.p2	AK021182|C330006D17Rik|77616|RIKEN cDNA C330006D17 gene
mm9_v1_chr11_-_116712559_116712636	0.0280796	FOXD3.p2	AF250133|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr8_+_71317827_71317912	0.0280686	FOXD3.p2	AK040574|Ints10|70885|integrator complex subunit 10	AK047093|Ints10|70885|integrator complex subunit 10	AK014939|Ints10|70885|integrator complex subunit 10	NM_027590|Ints10|70885|integrator complex subunit 10	AK147743|Ints10|70885|integrator complex subunit 10	AK169819|Ints10|70885|integrator complex subunit 10	AK030974|Ints10|70885|integrator complex subunit 10	BC031923|Ints10|70885|integrator complex subunit 10	AK083331|Ints10|70885|integrator complex subunit 10	AK034498|Ints10|70885|integrator complex subunit 10
mm9_v1_chr18_+_67959756_67959787	0.028061	FOXD3.p2	AK052420|Cep192|70799|centrosomal protein 192	NM_027556|Cep192|70799|centrosomal protein 192	AK089253|Cep192|70799|centrosomal protein 192	AK158414|Cep192|70799|centrosomal protein 192
mm9_v1_chr1_-_4350323_4350394	0.0279845	FOXD3.p2	BC038794|Rp1|19888|retinitis pigmentosa 1 (human)	BC120927|Rp1|19888|retinitis pigmentosa 1 (human)	BC120928|Rp1|19888|retinitis pigmentosa 1 (human)	AF155141|Rp1|19888|retinitis pigmentosa 1 (human)	AK044413|Rp1|19888|retinitis pigmentosa 1 (human)	BC096607|Rp1|19888|retinitis pigmentosa 1 (human)	NM_011283|Rp1|19888|retinitis pigmentosa 1 (human)
mm9_v1_chr3_-_36374517_36374560	0.027958	FOXD3.p2	D63423|Anxa5|11747|annexin A5
mm9_v1_chr17_+_49567718_49567797	0.0279126	FOXD3.p2	AK157231|Mocs1|56738|molybdenum cofactor synthesis 1
mm9_v1_chr5_-_75440460_75440521	0.0278978	FOXD3.p2	BC116971|Chic2|74277|cysteine-rich hydrophobic domain 2	BC116973|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chr12_+_77356412_77356500	0.0278647	FOXD3.p2	AK088700|Mthfd1|108156|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase	AF364579|Mthfd1|108156|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase	AK180541|Mthfd1|108156|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
mm9_v1_chr9_-_55983967_55984081	0.0278219	FOXD3.p2	AK212733|Tspan3|56434|tetraspanin 3	AK206202|Tspan3|56434|tetraspanin 3	AK211000|Tspan3|56434|tetraspanin 3	AK216580|Tspan3|56434|tetraspanin 3	AK219763|Tspan3|56434|tetraspanin 3	AK219867|Tspan3|56434|tetraspanin 3	AK206891|Tspan3|56434|tetraspanin 3	AK219936|Tspan3|56434|tetraspanin 3
mm9_v1_chr7_-_52230179_52230183	0.0277791	FOXD3.p2	AK035790|Cpt1c|78070|carnitine palmitoyltransferase 1c
mm9_v1_chr2_+_132512617_132512719	0.0277768	FOXD3.p2	BC138171|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene	AK004090|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene
mm9_v1_chr8_-_23587100_23587150	0.0277734	FOXD3.p2	AK131902|AI316807|102032|expressed sequence AI316807	AK140957|AI316807|102032|expressed sequence AI316807
mm9_v1_chr1_-_180260325_180260384	0.0277041	FOXD3.p2	
mm9_v1_chr5_+_74931439_74931607	0.0276731	FOXD3.p2	AK168464|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	NM_001159573|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	NM_001159574|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	NM_024183|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	AK049672|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	AK008561|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	AK005061|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	AK164105|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	BC003263|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)
mm9_v1_chr3_+_52072302_52072340	0.0276667	FOXD3.p2	AK137629|Foxo1|56458|forkhead box O1	AF114258|Foxo1|56458|forkhead box O1
mm9_v1_chr6_+_88052091_88052141	0.0275935	FOXD3.p2	
mm9_v1_chr7_+_116077936_116077945	0.0275904	FOXD3.p2	BC070473|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	BC083190|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F
mm9_v1_chr19_+_21354915_21354945	0.0275734	FOXD3.p2	AK185148|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chr5_-_104450785_104450834	0.027399	FOXD3.p2	AF304306|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	BC038340|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	NM_053262|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK154803|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155174|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK158327|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK170939|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AY053570|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155202|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155327|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr16_+_16213434_16213437	0.0273958	FOXD3.p2	AK004650|Pkp2|67451|plakophilin 2	AK004731|Pkp2|67451|plakophilin 2	AK049481|Pkp2|67451|plakophilin 2	AK162000|Pkp2|67451|plakophilin 2	AK167660|Pkp2|67451|plakophilin 2	BC138252|Pkp2|67451|plakophilin 2	BC138253|Pkp2|67451|plakophilin 2	NM_026163|Pkp2|67451|plakophilin 2
mm9_v1_chr2_+_28980511_28980658	0.0272427	FOXD3.p2	AK044730|Setx|269254|senataxin	NM_198033|Setx|269254|senataxin
mm9_v1_chr5_+_120566489_120566582	0.0271885	FOXD3.p2	AK146493|Rbm19|74111|RNA binding motif protein 19	AK053511|Rbm19|74111|RNA binding motif protein 19	BC025619|Rbm19|74111|RNA binding motif protein 19	NM_028762|Rbm19|74111|RNA binding motif protein 19	AK167100|Rbm19|74111|RNA binding motif protein 19	BC034010|Rbm19|74111|RNA binding motif protein 19
mm9_v1_chr19_-_7292086_7292113	0.0271593	FOXD3.p2	NM_007750|Cox8a|12868|cytochrome c oxidase, subunit VIIIa
mm9_v1_chr9_-_62644026_62644272	0.0271556	FOXD3.p2	AK078303|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK160393|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr12_-_88541151_88541189	0.0271411	FOXD3.p2	AK147378|Tmed8|382620|transmembrane emp24 domain containing 8	NM_001033475|Tmed8|382620|transmembrane emp24 domain containing 8
mm9_v1_chr11_-_106649652_106649810	0.0271093	FOXD3.p2	BC108369|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK203495|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129873|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129874|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC086320|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC046554|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	X65627|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC062916|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK044792|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK076018|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK088887|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK129022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK135173|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK166045|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	NM_007840|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr2_+_84776817_84776846	0.027096	FOXD3.p2	AF188622|Slc43a3|58207|solute carrier family 43, member 3
mm9_v1_chrX_+_34666757_34666828	0.0270747	FOXD3.p2	NM_025937|Nkap|67050|NFKB activating protein	BC026774|Nkap|67050|NFKB activating protein	AK011492|Nkap|67050|NFKB activating protein	AY388959|Nkap|67050|NFKB activating protein	AK038344|Nkap|67050|NFKB activating protein	AK076125|Nkap|67050|NFKB activating protein	AK012826|Nkap|67050|NFKB activating protein	AK089943|Nkap|67050|NFKB activating protein
mm9_v1_chr5_-_134790544_134790615	0.0267907	FOXD3.p2	AF017085|Gtf2i|14886|general transcription factor II I	AY030290|Gtf2i|14886|general transcription factor II I	AY030291|Gtf2i|14886|general transcription factor II I	AY030292|Gtf2i|14886|general transcription factor II I	AY030293|Gtf2i|14886|general transcription factor II I	AK147201|Gtf2i|14886|general transcription factor II I	BC053044|Gtf2i|14886|general transcription factor II I	NM_001080746|Gtf2i|14886|general transcription factor II I	NM_001080747|Gtf2i|14886|general transcription factor II I	NM_001080748|Gtf2i|14886|general transcription factor II I	NM_001080749|Gtf2i|14886|general transcription factor II I	NM_010365|Gtf2i|14886|general transcription factor II I
mm9_v1_chr10_+_40657980_40658124	0.0266481	FOXD3.p2	AK080786|Wasf1|83767|WASP family 1
mm9_v1_chr14_-_109313298_109313300	0.0266004	FOXD3.p2	AK144290|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr4_+_153516477_153516537	0.0265619	FOXD3.p2	NM_021499|Wdr8|59002|WD repeat domain 8	AK156969|Wdr8|59002|WD repeat domain 8	AK172690|Wdr8|59002|WD repeat domain 8	AB034911|Wdr8|59002|WD repeat domain 8	AK160331|Wdr8|59002|WD repeat domain 8	AK011773|Wdr8|59002|WD repeat domain 8	BC016120|Wdr8|59002|WD repeat domain 8	AK051688|Wdr8|59002|WD repeat domain 8
mm9_v1_chr9_+_80012873_80012911	0.0265426	FOXD3.p2	AK135310|Myo6|17920|myosin VI	U49739|Myo6|17920|myosin VI
mm9_v1_chr10_-_126507271_126507387	0.0263458	FOXD3.p2	AK160269|Tspan31|67125|tetraspanin 31	BC023306|Tspan31|67125|tetraspanin 31	AK012457|Tspan31|67125|tetraspanin 31	AK014183|Tspan31|67125|tetraspanin 31	AK075962|Tspan31|67125|tetraspanin 31	NM_025982|Tspan31|67125|tetraspanin 31	AK012567|Tspan31|67125|tetraspanin 31	AK012853|Tspan31|67125|tetraspanin 31	AK013523|Tspan31|67125|tetraspanin 31
mm9_v1_chr1_+_16678513_16678526	0.0263273	FOXD3.p2	AK019283|Ly96|17087|lymphocyte antigen 96
mm9_v1_chr1_+_175350728_175350734	0.0262632	FOXD3.p2	BC033443|Aim2|383619|absent in melanoma 2	AK050724|Aim2|383619|absent in melanoma 2	NM_001013779|Aim2|383619|absent in melanoma 2
mm9_v1_chr2_-_70893583_70893669	0.0262579	FOXD3.p2	BC004636|Mettl8|228019|methyltransferase like 8	AK087927|Mettl8|228019|methyltransferase like 8	BC057960|Mettl8|228019|methyltransferase like 8	AK039461|Mettl8|228019|methyltransferase like 8	AK042669|Mettl8|228019|methyltransferase like 8	DQ093357|Mettl8|228019|methyltransferase like 8	DQ093358|Mettl8|228019|methyltransferase like 8	NM_145524|Mettl8|228019|methyltransferase like 8
mm9_v1_chr4_-_34754469_34754554	0.0262278	FOXD3.p2	AB221605|Zfp292|30046|zinc finger protein 292
mm9_v1_chrX_-_34708836_34708836	0.0261981	FOXD3.p2	AK133120|Akap14|434756|A kinase (PRKA) anchor protein 14	BC147265|Akap14|434756|A kinase (PRKA) anchor protein 14	BC147494|Akap14|434756|A kinase (PRKA) anchor protein 14	NM_001033785|Akap14|434756|A kinase (PRKA) anchor protein 14
mm9_v1_chr14_-_50940507_50940542	0.0261108	FOXD3.p2	NM_146664|Olfr734|258658|olfactory receptor 734	BC141029|Olfr734|258658|olfactory receptor 734
mm9_v1_chr8_+_28153059_28153137	0.0260384	FOXD3.p2	AK049905|Prosc|114863|proline synthetase co-transcribed	BC047992|Prosc|114863|proline synthetase co-transcribed	AK160172|Prosc|114863|proline synthetase co-transcribed	AK032308|Prosc|114863|proline synthetase co-transcribed	AK134549|Prosc|114863|proline synthetase co-transcribed	AK191605|Prosc|114863|proline synthetase co-transcribed	AK203439|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr18_+_36441115_36441157	0.026026	FOXD3.p2	AK075821|Pura|19290|purine rich element binding protein A
mm9_v1_chr15_-_72926936_72926959	0.0259606	FOXD3.p2	AK003962|1110029L17Rik|68722|RIKEN cDNA 1110029L17 gene
mm9_v1_chr6_-_137118238_137118241	0.0258527	FOXD3.p2	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr2_+_97307652_97307938	0.0257141	FOXD3.p2	AK032467|Lrrc4c|241568|leucine rich repeat containing 4C	AK032088|Lrrc4c|241568|leucine rich repeat containing 4C	NM_178725|Lrrc4c|241568|leucine rich repeat containing 4C	BC094588|Lrrc4c|241568|leucine rich repeat containing 4C
mm9_v1_chr14_+_105658112_105658180	0.0255148	FOXD3.p2	BC117075|Ndfip2|76273|Nedd4 family interacting protein 2	BC119092|Ndfip2|76273|Nedd4 family interacting protein 2	AK013250|Ndfip2|76273|Nedd4 family interacting protein 2	AF411608|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr5_+_29761203_29761262	0.0255077	FOXD3.p2	AK148406|Nom1|433864|nucleolar protein with MIF4G domain 1	NM_001033457|Nom1|433864|nucleolar protein with MIF4G domain 1
mm9_v1_chr5_-_111209468_111209636	0.0253358	FOXD3.p2	BC021446|Pus1|56361|pseudouridine synthase 1	BC034359|Pus1|56361|pseudouridine synthase 1	AB041563|Pus1|56361|pseudouridine synthase 1	AK089258|Pus1|56361|pseudouridine synthase 1	NM_001025561|Pus1|56361|pseudouridine synthase 1	NM_019700|Pus1|56361|pseudouridine synthase 1	NM_001025562|Pus1|56361|pseudouridine synthase 1	AK161521|Pus1|56361|pseudouridine synthase 1
mm9_v1_chr18_+_53405278_53405278	0.025255	FOXD3.p2	
mm9_v1_chr5_+_53132872_53132957	0.0252269	FOXD3.p2	BC062144|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AF411321|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta
mm9_v1_chr17_+_33661120_33661188	0.0251715	FOXD3.p2	BC082773|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK042525|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK046333|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK034843|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK034565|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK076334|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	NM_172619|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	BC056427|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	BC100558|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
mm9_v1_chr7_+_138554180_138554255	0.0251541	FOXD3.p2	BC044826|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK004889|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK076535|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK152325|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	BC011235|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	BC035231|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain
mm9_v1_chr1_-_51535232_51535262	0.0250752	FOXD3.p2	AK167541|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK167652|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK028886|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK031015|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK042351|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK049396|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK051607|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK077226|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK077767|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK079434|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK083915|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK163613|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK166300|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AY880264|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	NM_028696|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK076824|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A
mm9_v1_chr1_-_37947226_37947269	0.024897	FOXD3.p2	BC020137|Mitd1|69028|MIT, microtubule interacting and transport, domain containing 1	AK171903|Mitd1|69028|MIT, microtubule interacting and transport, domain containing 1	NM_026913|Mitd1|69028|MIT, microtubule interacting and transport, domain containing 1
mm9_v1_chr2_-_18314387_18314456	0.0248941	FOXD3.p2	AK144228|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	BC080300|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	AK133582|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	AK012505|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_001190817|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_007869|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1
mm9_v1_chr7_+_3646102_3646199	0.0248623	FOXD3.p2	NM_024168|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK053916|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	BC091756|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK010759|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	BC002205|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK013253|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)
mm9_v1_chr16_+_16870955_16870979	0.0247305	FOXD3.p2	AK146475|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr16_-_96343290_96343364	0.0246808	FOXD3.p2	
mm9_v1_chr10_+_81022229_81022246	0.0246688	FOXD3.p2	AK131845|Aes|14797|amino-terminal enhancer of split	AK131994|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr5_+_125002866_125002933	0.0245296	FOXD3.p2	AK154422|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_001190795|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_026409|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK167149|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK012782|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK077525|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK129402|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK033741|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117786|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117787|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC043052|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK017554|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
mm9_v1_chr3_-_145770980_145771093	0.0245009	FOXD3.p2	AK029903|Wdr63|242253|WD repeat domain 63	NM_172864|Wdr63|242253|WD repeat domain 63	BC158119|Wdr63|242253|WD repeat domain 63
mm9_v1_chr6_+_56952293_56952348	0.0244794	FOXD3.p2	BC125532|Vmn1r6|171193|vomeronasal 1 receptor 6	BC125534|Vmn1r6|171193|vomeronasal 1 receptor 6	NM_134175|Vmn1r6|171193|vomeronasal 1 receptor 6
mm9_v1_chr3_-_113277601_113277686	0.0244766	FOXD3.p2	AK029642|Amy1|11722|amylase 1, salivary	NM_007446|Amy1|11722|amylase 1, salivary	V00719|Amy1|11722|amylase 1, salivary
mm9_v1_chr2_-_85745208_85745208	0.0244223	FOXD3.p2	BC119447|Olfr1024|257900|olfactory receptor 1024	NM_001005230|Olfr1024|257900|olfactory receptor 1024
mm9_v1_chr10_+_18189773_18189786	0.0244204	FOXD3.p2	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr5_+_22056208_22056261	0.0243699	FOXD3.p2	AK006545|1700030G06Rik|69507|RIKEN cDNA 1700030G06 gene	AK029857|6030443J06Rik|320719|RIKEN cDNA 6030443J06 gene	AK044020|1700030G06Rik|69507|RIKEN cDNA 1700030G06 gene	AK030448|6030443J06Rik|320719|RIKEN cDNA 6030443J06 gene
mm9_v1_chr13_-_35085906_35085940	0.0243462	FOXD3.p2	BC001983|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	AK182614|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase
mm9_v1_chr7_-_30691111_30691122	0.0243023	FOXD3.p2	AK147732|Zfp27|22689|zinc finger protein 27	NM_001037707|Zfp27|22689|zinc finger protein 27	NM_011754|Zfp27|22689|zinc finger protein 27
mm9_v1_chr10_+_82359714_82359858	0.0242741	FOXD3.p2	AK007891|Txnrd1|50493|thioredoxin reductase 1	AK202828|Txnrd1|50493|thioredoxin reductase 1	AK204569|Txnrd1|50493|thioredoxin reductase 1	AK217830|Txnrd1|50493|thioredoxin reductase 1	AK194198|Txnrd1|50493|thioredoxin reductase 1	AK203123|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr2_-_160773804_160773823	0.0240512	FOXD3.p2	AK017414|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr14_+_37881214_37881259	0.0240451	FOXD3.p2	BC037728|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	AK044611|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	AK044383|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	NM_173418|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2	BC057628|Lrit2|239038|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
mm9_v1_chr2_+_69699618_69699738	0.0240272	FOXD3.p2	NM_001110145|Ssb|20823|Sjogren syndrome antigen B	NM_009278|Ssb|20823|Sjogren syndrome antigen B	AK088650|Ssb|20823|Sjogren syndrome antigen B	AK134864|Ssb|20823|Sjogren syndrome antigen B	AK168828|Ssb|20823|Sjogren syndrome antigen B	AK032940|Ssb|20823|Sjogren syndrome antigen B	AK017822|Ssb|20823|Sjogren syndrome antigen B	AK088370|Ssb|20823|Sjogren syndrome antigen B	AK088677|Ssb|20823|Sjogren syndrome antigen B	L00993|Ssb|20823|Sjogren syndrome antigen B	Y07951|Ssb|20823|Sjogren syndrome antigen B	AK141487|Ssb|20823|Sjogren syndrome antigen B	BC003820|Ssb|20823|Sjogren syndrome antigen B	BC106150|Ssb|20823|Sjogren syndrome antigen B
mm9_v1_chr18_+_21159829_21159841	0.0240271	FOXD3.p2	AB025010|Rnf138|56515|ring finger protein 138	AB025011|Rnf138|56515|ring finger protein 138	NM_019706|Rnf138|56515|ring finger protein 138	NM_207623|Rnf138|56515|ring finger protein 138
mm9_v1_chr7_-_126864266_126864324	0.0240048	FOXD3.p2	BC004776|Thumpd1|233802|THUMP domain containing 1	NM_145585|Thumpd1|233802|THUMP domain containing 1	AK084107|Thumpd1|233802|THUMP domain containing 1	AK152912|Thumpd1|233802|THUMP domain containing 1	AK032078|Thumpd1|233802|THUMP domain containing 1
mm9_v1_chr14_+_105657889_105657939	0.0238986	FOXD3.p2	NM_001190989|Ndfip2|76273|Nedd4 family interacting protein 2	NM_029561|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr19_+_11844839_11844928	0.023878	FOXD3.p2	AK165616|Mrpl16|94063|mitochondrial ribosomal protein L16	BC044721|Mrpl16|94063|mitochondrial ribosomal protein L16	AK011971|Mrpl16|94063|mitochondrial ribosomal protein L16	BC029009|Mrpl16|94063|mitochondrial ribosomal protein L16	AB049643|Mrpl16|94063|mitochondrial ribosomal protein L16	NM_025606|Mrpl16|94063|mitochondrial ribosomal protein L16	AK004034|Mrpl16|94063|mitochondrial ribosomal protein L16	AK009687|Mrpl16|94063|mitochondrial ribosomal protein L16
mm9_v1_chr11_-_120489993_120490076	0.0238527	FOXD3.p2	AK038934|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)	AK083165|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm9_v1_chr10_-_8665041_8665100	0.0237469	FOXD3.p2	
mm9_v1_chr11_-_94410463_94410520	0.0237192	FOXD3.p2	BC139274|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC139276|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC145594|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK148401|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK046706|Rsad1|237926|radical S-adenosyl methionine domain containing 1	NM_001013381|Rsad1|237926|radical S-adenosyl methionine domain containing 1
mm9_v1_chr14_+_45949451_45949542	0.0237085	FOXD3.p2	AK012174|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC116752|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC119168|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	NM_025959|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK144728|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK014354|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC037099|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK166961|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC043044|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC057997|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6
mm9_v1_chr7_+_107307748_107307807	0.0236831	FOXD3.p2	AK011925|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	BC115472|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	NM_026010|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	BC115473|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	AK008917|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	AK013127|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)
mm9_v1_chr3_-_90195440_90195485	0.0236805	FOXD3.p2	
mm9_v1_chr10_-_127986030_127986175	0.0236756	FOXD3.p2	U93862|Rpl41|67945|ribosomal protein L41	BC099380|Rpl41|67945|ribosomal protein L41	BC081450|Rpl41|67945|ribosomal protein L41	BC083066|Rpl41|67945|ribosomal protein L41	BC092010|Rpl41|67945|ribosomal protein L41	AK019178|Rpl41|67945|ribosomal protein L41	AK010564|Rpl41|67945|ribosomal protein L41	AK002503|Rpl41|67945|ribosomal protein L41	AK008901|Rpl41|67945|ribosomal protein L41	AK010585|Rpl41|67945|ribosomal protein L41	AK012252|Rpl41|67945|ribosomal protein L41	AK012487|Rpl41|67945|ribosomal protein L41	AK028126|Rpl41|67945|ribosomal protein L41	AK028263|Rpl41|67945|ribosomal protein L41	AK168485|Rpl41|67945|ribosomal protein L41	AK168653|Rpl41|67945|ribosomal protein L41	AK168719|Rpl41|67945|ribosomal protein L41	BC089572|Rpl41|67945|ribosomal protein L41	AK012476|Rpl41|67945|ribosomal protein L41	AK151566|Rpl41|67945|ribosomal protein L41	AK007874|Rpl41|67945|ribosomal protein L41	AK009548|Rpl41|67945|ribosomal protein L41	AK010246|Rpl41|67945|ribosomal protein L41	AK010317|Rpl41|67945|ribosomal protein L41	AK010482|Rpl41|67945|ribosomal protein L41	AK010509|Rpl41|67945|ribosomal protein L41	AK010583|Rpl41|67945|ribosomal protein L41	AK013324|Rpl41|67945|ribosomal protein L41	AK019049|Rpl41|67945|ribosomal protein L41	AK150502|Rpl41|67945|ribosomal protein L41	AK160588|Rpl41|67945|ribosomal protein L41	AK168107|Rpl41|67945|ribosomal protein L41	BC089573|Rpl41|67945|ribosomal protein L41	BC100592|Rpl41|67945|ribosomal protein L41	BC145727|Rpl41|67945|ribosomal protein L41	BC145729|Rpl41|67945|ribosomal protein L41	AK012450|Rpl41|67945|ribosomal protein L41	AK028231|Rpl41|67945|ribosomal protein L41
mm9_v1_chr2_-_155418441_155418518	0.0236603	FOXD3.p2	NM_008180|Gss|14854|glutathione synthetase	U35456|Gss|14854|glutathione synthetase	BC003784|Gss|14854|glutathione synthetase	AK146486|Gss|14854|glutathione synthetase	AK149577|Gss|14854|glutathione synthetase	AK169096|Gss|14854|glutathione synthetase	AK169276|Gss|14854|glutathione synthetase	AK159630|Gss|14854|glutathione synthetase
mm9_v1_chr17_+_6106857_6106857	0.0236063	FOXD3.p2	AK043826|Tulp4|68842|tubby like protein 4	AK084820|Tulp4|68842|tubby like protein 4
mm9_v1_chr9_+_51894422_51894502	0.0235859	FOXD3.p2	
mm9_v1_chr7_-_91827857_91827907	0.0235836	FOXD3.p2	AK002775|Zfand6|65098|zinc finger, AN1-type domain 6	NM_022985|Zfand6|65098|zinc finger, AN1-type domain 6	AK144902|Zfand6|65098|zinc finger, AN1-type domain 6	AK009403|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr11_+_60955985_60956002	0.0235751	FOXD3.p2	AK155178|Tnfrsf13b|57916|tumor necrosis factor receptor superfamily, member 13b
mm9_v1_chr1_-_75132977_75133049	0.0235494	FOXD3.p2	AK209717|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK183285|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK180897|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr18_-_6516073_6516084	0.0235193	FOXD3.p2	AK148194|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	AF079765|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	NM_007935|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)
mm9_v1_chr7_+_140050907_140050982	0.0235155	FOXD3.p2	NM_198017|Fam175b|109359|family with sequence similarity 175, member B	AK082887|Fam175b|109359|family with sequence similarity 175, member B	AK163537|Fam175b|109359|family with sequence similarity 175, member B	AK165918|Fam175b|109359|family with sequence similarity 175, member B	AK170704|Fam175b|109359|family with sequence similarity 175, member B	AK146064|Fam175b|109359|family with sequence similarity 175, member B	AK171524|Fam175b|109359|family with sequence similarity 175, member B
mm9_v1_chr19_-_8872918_8873082	0.0234171	FOXD3.p2	BC055278|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK010687|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK020719|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK013134|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK017473|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK011627|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	NM_026329|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	BC005580|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK007892|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G
mm9_v1_chr13_+_44826638_44826639	0.0233572	FOXD3.p2	AK147226|Jarid2|16468|jumonji, AT rich interactive domain 2
mm9_v1_chr3_-_53267127_53267244	0.0232129	FOXD3.p2	AK133986|Nhlrc3|212114|NHL repeat containing 3	BC087903|Nhlrc3|212114|NHL repeat containing 3	BC107356|Nhlrc3|212114|NHL repeat containing 3	AK029465|Nhlrc3|212114|NHL repeat containing 3	AK033167|Nhlrc3|212114|NHL repeat containing 3	NM_172501|Nhlrc3|212114|NHL repeat containing 3	AK162824|Nhlrc3|212114|NHL repeat containing 3	AK220477|Nhlrc3|212114|NHL repeat containing 3
mm9_v1_chr11_+_87983066_87983095	0.0231965	FOXD3.p2	NM_001172099|Cuedc1|103841|CUE domain containing 1	BC131989|Cuedc1|103841|CUE domain containing 1	BC131991|Cuedc1|103841|CUE domain containing 1	BC145206|Cuedc1|103841|CUE domain containing 1
mm9_v1_chr18_-_64676144_64676158	0.0231815	FOXD3.p2	BC052849|Nars|70223|asparaginyl-tRNA synthetase
mm9_v1_chr19_-_7292009_7292055	0.023119	FOXD3.p2	BC120708|Cox8a|12868|cytochrome c oxidase, subunit VIIIa	BC120710|Cox8a|12868|cytochrome c oxidase, subunit VIIIa	U37721|Cox8a|12868|cytochrome c oxidase, subunit VIIIa	AK002524|Cox8a|12868|cytochrome c oxidase, subunit VIIIa	AK008594|Cox8a|12868|cytochrome c oxidase, subunit VIIIa
mm9_v1_chr4_-_116228531_116228547	0.0230664	FOXD3.p2	AK041960|Tmem69|230657|transmembrane protein 69	BC106178|Tmem69|230657|transmembrane protein 69	NM_177670|Tmem69|230657|transmembrane protein 69
mm9_v1_chr11_+_101594342_101594372	0.0230614	FOXD3.p2	AK170616|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm9_v1_chr1_-_163748523_163748605	0.0229865	FOXD3.p2	AK033720|AI848100|226551|expressed sequence AI848100
mm9_v1_chr14_+_70132638_70132665	0.0229168	FOXD3.p2	AK015602|4930480K23Rik|75016|RIKEN cDNA 4930480K23 gene
mm9_v1_chr19_+_53214934_53215104	0.0228536	FOXD3.p2	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr6_-_137118197_137118219	0.022835	FOXD3.p2	AK028025|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	AK133734|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr13_-_67601323_67601457	0.022833	FOXD3.p2	BC139150|Zfp58|238693|zinc finger protein 58	BC139151|Zfp58|238693|zinc finger protein 58	AK041250|Zfp58|238693|zinc finger protein 58	AK162259|Zfp58|238693|zinc finger protein 58	AK167399|Zfp58|238693|zinc finger protein 58	NM_001007575|Zfp58|238693|zinc finger protein 58
mm9_v1_chr14_-_47896506_47896522	0.0227659	FOXD3.p2	AK052690|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1
mm9_v1_chr3_+_108340463_108340501	0.0226906	FOXD3.p2	BC049763|1700013F07Rik|75504|RIKEN cDNA 1700013F07 gene	BC100493|1700013F07Rik|75504|RIKEN cDNA 1700013F07 gene	AK005946|1700013F07Rik|75504|RIKEN cDNA 1700013F07 gene	BC116222|1700013F07Rik|75504|RIKEN cDNA 1700013F07 gene	BC116223|1700013F07Rik|75504|RIKEN cDNA 1700013F07 gene	NM_029314|1700013F07Rik|75504|RIKEN cDNA 1700013F07 gene
mm9_v1_chr11_-_100579201_100579275	0.0226654	FOXD3.p2	
mm9_v1_chr2_+_128524597_128524732	0.0225875	FOXD3.p2	NM_008587|Mertk|17289|c-mer proto-oncogene tyrosine kinase	U21301|Mertk|17289|c-mer proto-oncogene tyrosine kinase
mm9_v1_chr5_+_116009516_116009532	0.0225574	FOXD3.p2	AK012606|Rplp0|11837|ribosomal protein, large, P0	AK029816|Rplp0|11837|ribosomal protein, large, P0	AK161683|Rplp0|11837|ribosomal protein, large, P0	BC087887|Rplp0|11837|ribosomal protein, large, P0	BC089496|Rplp0|11837|ribosomal protein, large, P0	AK081678|Rplp0|11837|ribosomal protein, large, P0	AK002315|Rplp0|11837|ribosomal protein, large, P0	AK009767|Rplp0|11837|ribosomal protein, large, P0	AK010267|Rplp0|11837|ribosomal protein, large, P0	AK150448|Rplp0|11837|ribosomal protein, large, P0	AK159358|Rplp0|11837|ribosomal protein, large, P0	AK160541|Rplp0|11837|ribosomal protein, large, P0	AK166728|Rplp0|11837|ribosomal protein, large, P0	X15267|Rplp0|11837|ribosomal protein, large, P0	AK167240|Rplp0|11837|ribosomal protein, large, P0	BC003833|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr15_+_96199877_96199934	0.0224688	FOXD3.p2	AK014481|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr8_-_106772390_106772476	0.0224664	FOXD3.p2	AF105217|Tk2|57813|thymidine kinase 2, mitochondrial	AJ249341|Tk2|57813|thymidine kinase 2, mitochondrial	BC019982|Tk2|57813|thymidine kinase 2, mitochondrial	AK041651|Tk2|57813|thymidine kinase 2, mitochondrial	AK051286|Tk2|57813|thymidine kinase 2, mitochondrial	AK154160|Tk2|57813|thymidine kinase 2, mitochondrial	AK087557|Tk2|57813|thymidine kinase 2, mitochondrial	NM_021028|Tk2|57813|thymidine kinase 2, mitochondrial
mm9_v1_chrX_+_96133407_96133568	0.0224543	FOXD3.p2	AK045453|Yipf6|77929|Yip1 domain family, member 6	BC048712|Yipf6|77929|Yip1 domain family, member 6	AK079683|Yipf6|77929|Yip1 domain family, member 6	AK020780|Yipf6|77929|Yip1 domain family, member 6	AK143152|Yipf6|77929|Yip1 domain family, member 6
mm9_v1_chr15_+_90054711_90054794	0.0224305	FOXD3.p2	AK143038|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK166344|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK147821|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	NM_001033441|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK170450|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK153580|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK171179|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)
mm9_v1_chr7_+_112789644_112789816	0.0224047	FOXD3.p2	
mm9_v1_chr1_-_175696989_175697156	0.0223953	FOXD3.p2	AK150522|Ifi204|15951|interferon activated gene 204	NM_008329|Ifi204|15951|interferon activated gene 204	AK138785|Ifi204|15951|interferon activated gene 204
mm9_v1_chr15_-_76437917_76438021	0.0223786	FOXD3.p2	BC049941|Cpsf1|94230|cleavage and polyadenylation specific factor 1	AK155806|Cpsf1|94230|cleavage and polyadenylation specific factor 1	AK155648|Cpsf1|94230|cleavage and polyadenylation specific factor 1	AF322193|Cpsf1|94230|cleavage and polyadenylation specific factor 1	BC056388|Cpsf1|94230|cleavage and polyadenylation specific factor 1	NM_001164173|Cpsf1|94230|cleavage and polyadenylation specific factor 1	NM_053193|Cpsf1|94230|cleavage and polyadenylation specific factor 1
mm9_v1_chr11_-_69476065_69476093	0.0223618	FOXD3.p2	BC026776|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK172020|Mpdu1|24070|mannose-P-dolichol utilization defect 1	BC048871|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AB024713|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK040432|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK089426|Mpdu1|24070|mannose-P-dolichol utilization defect 1
mm9_v1_chr7_+_97177668_97177676	0.0223132	FOXD3.p2	AK165252|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK157435|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK046045|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene
mm9_v1_chr4_+_5571316_5571381	0.0222914	FOXD3.p2	AK159054|Fam110b|242297|family with sequence similarity 110, member B	AK163184|Fam110b|242297|family with sequence similarity 110, member B	AK052596|Fam110b|242297|family with sequence similarity 110, member B	NM_173426|Fam110b|242297|family with sequence similarity 110, member B	AK005911|Fam110b|242297|family with sequence similarity 110, member B
mm9_v1_chr7_+_51502120_51502163	0.0222839	FOXD3.p2	AK165177|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene	AK010334|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene	AK049154|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene	AK169796|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene	AK169836|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene	AK172418|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene	AK162303|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene	BC016099|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene
mm9_v1_chr5_-_124637048_124637063	0.0222081	FOXD3.p2	AK147486|Pitpnm2|19679|phosphatidylinositol transfer protein, membrane-associated 2
mm9_v1_chr6_+_141578016_141578059	0.0221882	FOXD3.p2	AB031959|Slco1b2|28253|solute carrier organic anion transporter family, member 1b2	NM_020495|Slco1b2|28253|solute carrier organic anion transporter family, member 1b2
mm9_v1_chr13_+_41096549_41096687	0.0221869	FOXD3.p2	AY030406|Pak1ip1|68083|PAK1 interacting protein 1	AK002852|Pak1ip1|68083|PAK1 interacting protein 1	BC024629|Pak1ip1|68083|PAK1 interacting protein 1	AK150747|Pak1ip1|68083|PAK1 interacting protein 1	AK150919|Pak1ip1|68083|PAK1 interacting protein 1	AK077941|Pak1ip1|68083|PAK1 interacting protein 1	AK135946|Pak1ip1|68083|PAK1 interacting protein 1	BC060371|Pak1ip1|68083|PAK1 interacting protein 1	BC018522|Pak1ip1|68083|PAK1 interacting protein 1	BC116729|Pak1ip1|68083|PAK1 interacting protein 1	BC116731|Pak1ip1|68083|PAK1 interacting protein 1
mm9_v1_chr2_-_10052196_10052339	0.0220611	FOXD3.p2	AK133782|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	BC034341|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	X70392|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	NM_010582|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2
mm9_v1_chr16_+_45094214_45094287	0.0219444	FOXD3.p2	AB075019|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr9_-_61762220_61762398	0.0218524	FOXD3.p2	BC013252|Rplp1|56040|ribosomal protein, large, P1	BC092536|Rplp1|56040|ribosomal protein, large, P1	NM_018853|Rplp1|56040|ribosomal protein, large, P1	BC092088|Rplp1|56040|ribosomal protein, large, P1	BC091747|Rplp1|56040|ribosomal protein, large, P1	BC058685|Rplp1|56040|ribosomal protein, large, P1	U29402|Rplp1|56040|ribosomal protein, large, P1	AK007832|Rplp1|56040|ribosomal protein, large, P1	AK088070|Rplp1|56040|ribosomal protein, large, P1	AK169347|Rplp1|56040|ribosomal protein, large, P1	AK010656|Rplp1|56040|ribosomal protein, large, P1
mm9_v1_chr13_-_91363560_91363583	0.0218522	FOXD3.p2	AK077333|Atg10|66795|autophagy-related 10 (yeast)	AK009076|Atg10|66795|autophagy-related 10 (yeast)	AK017355|Atg10|66795|autophagy-related 10 (yeast)
mm9_v1_chr11_+_62692976_62693095	0.0216681	FOXD3.p2	AK077277|Fam18b|67510|family with sequence similarity 18, member B	NM_026210|Fam18b|67510|family with sequence similarity 18, member B	AK150936|Fam18b|67510|family with sequence similarity 18, member B	BC115504|Fam18b|67510|family with sequence similarity 18, member B	BC115505|Fam18b|67510|family with sequence similarity 18, member B	AK007707|Fam18b|67510|family with sequence similarity 18, member B	AK017572|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr4_+_47104780_47104844	0.0215028	FOXD3.p2	AK082014|Galnt12|230145|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12	AK042133|Galnt12|230145|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12	AK043977|Galnt12|230145|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12	AK156751|Galnt12|230145|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12	BC056425|Galnt12|230145|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12	BC024475|Galnt12|230145|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12	AK033638|Galnt12|230145|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12	NM_172693|Galnt12|230145|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12	AB175680|Galnt12|230145|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12
mm9_v1_chr10_-_90633199_90633208	0.0214129	FOXD3.p2	AK159161|Tmpo|21917|thymopoietin
mm9_v1_chr11_-_98300224_98300319	0.0213552	FOXD3.p2	AK002959|1810046J19Rik|103742|RIKEN cDNA 1810046J19 gene	AK009922|1810046J19Rik|103742|RIKEN cDNA 1810046J19 gene	AK007795|1810046J19Rik|103742|RIKEN cDNA 1810046J19 gene	AK041314|1810046J19Rik|103742|RIKEN cDNA 1810046J19 gene	BC021589|1810046J19Rik|103742|RIKEN cDNA 1810046J19 gene	NM_025559|1810046J19Rik|103742|RIKEN cDNA 1810046J19 gene
mm9_v1_chr2_+_72018059_72018093	0.0213057	FOXD3.p2	AK004874|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr10_+_119645800_119645892	0.0212438	FOXD3.p2	BC027637|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK039270|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK153442|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK162942|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK006207|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	NM_026617|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4
mm9_v1_chr7_+_31099832_31099870	0.0212038	FOXD3.p2	NM_153577|AI428936|233066|expressed sequence AI428936	BC023803|AI428936|233066|expressed sequence AI428936
mm9_v1_chrX_-_35988178_35988234	0.0211908	FOXD3.p2	AB030184|C1galt1c1|59048|C1GALT1-specific chaperone 1	AY159320|C1galt1c1|59048|C1GALT1-specific chaperone 1
mm9_v1_chr1_+_33776715_33776982	0.0210658	FOXD3.p2	AK163909|Rab23|19335|RAB23, member RAS oncogene family	AK047068|Rab23|19335|RAB23, member RAS oncogene family	NM_008999|Rab23|19335|RAB23, member RAS oncogene family	AK164057|Rab23|19335|RAB23, member RAS oncogene family	AK054079|Rab23|19335|RAB23, member RAS oncogene family	AK082017|Rab23|19335|RAB23, member RAS oncogene family	BC025578|Rab23|19335|RAB23, member RAS oncogene family	AK045454|Rab23|19335|RAB23, member RAS oncogene family
mm9_v1_chr9_-_91260619_91260636	0.0210551	FOXD3.p2	NM_009573|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chr7_+_135019712_135019876	0.0209624	FOXD3.p2	AK080005|Zfp668|244219|zinc finger protein 668	AK028847|Zfp668|244219|zinc finger protein 668
mm9_v1_chr2_+_25719373_25719373	0.0209173	FOXD3.p2	FJ628361|Kcnt1|227632|potassium channel, subfamily T, member 1	NM_001145403|Kcnt1|227632|potassium channel, subfamily T, member 1
mm9_v1_chr5_+_54200903_54200980	0.020844	FOXD3.p2	BC020138|Tbc1d19|67249|TBC1 domain family, member 19	AK012836|Tbc1d19|67249|TBC1 domain family, member 19	AK076128|Tbc1d19|67249|TBC1 domain family, member 19	AK177065|Tbc1d19|67249|TBC1 domain family, member 19
mm9_v1_chr18_+_32594823_32594898	0.0207625	FOXD3.p2	AK077987|Bin1|30948|bridging integrator 1
mm9_v1_chr3_-_126865105_126865154	0.0206798	FOXD3.p2	AK081244|Ank2|109676|ankyrin 2, brain
mm9_v1_chr18_-_64676160_64676211	0.0206645	FOXD3.p2	AK083730|Nars|70223|asparaginyl-tRNA synthetase	AK157244|Nars|70223|asparaginyl-tRNA synthetase	AK172657|Nars|70223|asparaginyl-tRNA synthetase	AK077699|Nars|70223|asparaginyl-tRNA synthetase	NM_001142950|Nars|70223|asparaginyl-tRNA synthetase	NM_027350|Nars|70223|asparaginyl-tRNA synthetase
mm9_v1_chr14_+_54873808_54873916	0.0204314	FOXD3.p2	AK030250|Abhd4|105501|abhydrolase domain containing 4
mm9_v1_chr2_+_153571990_153572007	0.0203061	FOXD3.p2	BC052405|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1
mm9_v1_chr9_+_113840232_113840314	0.0202928	FOXD3.p2	BC034749|Ubp1|22221|upstream binding protein 1
mm9_v1_chr7_+_116077911_116077933	0.0201131	FOXD3.p2	AK152037|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	NM_025344|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK002778|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK003372|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK088537|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK136797|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK010333|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F
mm9_v1_chr11_-_17847399_17847495	0.0200955	FOXD3.p2	AK018594|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr9_+_96096690_96096766	0.0199953	FOXD3.p2	AK044784|Tfdp2|211586|transcription factor Dp 2	NM_001184706|Tfdp2|211586|transcription factor Dp 2	NM_001184708|Tfdp2|211586|transcription factor Dp 2	NM_178667|Tfdp2|211586|transcription factor Dp 2	AK029055|Tfdp2|211586|transcription factor Dp 2	AK053881|Tfdp2|211586|transcription factor Dp 2	AK162972|Tfdp2|211586|transcription factor Dp 2	AK079624|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr11_+_70338856_70338858	0.0199354	FOXD3.p2	NM_008946|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr7_+_128195668_128195858	0.0197944	FOXD3.p2	AK188768|Mettl9|59052|methyltransferase like 9	AK202674|Mettl9|59052|methyltransferase like 9	AK208061|Mettl9|59052|methyltransferase like 9	AK209406|Mettl9|59052|methyltransferase like 9	AK210173|Mettl9|59052|methyltransferase like 9	AK217664|Mettl9|59052|methyltransferase like 9	AK219043|Mettl9|59052|methyltransferase like 9	AK206681|Mettl9|59052|methyltransferase like 9	AK216652|Mettl9|59052|methyltransferase like 9
mm9_v1_chr7_-_134339388_134339535	0.0197827	FOXD3.p2	AK167249|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK030393|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	BC079575|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK154346|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK010582|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	BC006920|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK031694|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK034689|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	NM_027353|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2
mm9_v1_chr6_+_124254668_124254724	0.0196151	FOXD3.p2	NM_001170395|Cd163|93671|CD163 antigen	NM_053094|Cd163|93671|CD163 antigen	AF274883|Cd163|93671|CD163 antigen	BC144848|Cd163|93671|CD163 antigen	BC145793|Cd163|93671|CD163 antigen	DQ058616|Cd163|93671|CD163 antigen	DQ058617|Cd163|93671|CD163 antigen
mm9_v1_chr8_+_72178388_72178454	0.0195838	FOXD3.p2	AK076396|Zfp964|636741|zinc finger protein 964	BC138280|Zfp964|636741|zinc finger protein 964	BC145229|Zfp964|636741|zinc finger protein 964	NM_001177527|Zfp964|636741|zinc finger protein 964
mm9_v1_chr14_+_79987495_79987615	0.0195529	FOXD3.p2	AK082328|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	NM_026474|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK045153|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK141416|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK007881|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK010830|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK020433|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK148838|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	BC009167|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK010711|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
mm9_v1_chr1_-_152840432_152840584	0.0194962	FOXD3.p2	BC147549|Hmcn1|545370|hemicentin 1	BC147568|Hmcn1|545370|hemicentin 1	AK052713|Hmcn1|545370|hemicentin 1	NM_001024720|Hmcn1|545370|hemicentin 1
mm9_v1_chr3_-_156224638_156224816	0.0194776	FOXD3.p2	AK083124|4930570G19Rik|329782|RIKEN cDNA 4930570G19 gene	AK016265|4930570G19Rik|329782|RIKEN cDNA 4930570G19 gene	BC048612|4930570G19Rik|329782|RIKEN cDNA 4930570G19 gene
mm9_v1_chr5_+_87429884_87429898	0.0194298	FOXD3.p2	AK083294|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	NM_172881|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	BC113789|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	AK149501|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35
mm9_v1_chrX_+_50144260_50144428	0.0193634	FOXD3.p2	AK134708|Ccdc160|434778|coiled-coil domain containing 160	NM_001034059|Ccdc160|434778|coiled-coil domain containing 160	BC138946|Ccdc160|434778|coiled-coil domain containing 160	BC138947|Ccdc160|434778|coiled-coil domain containing 160
mm9_v1_chr9_+_75862772_75862821	0.0193519	FOXD3.p2	BC037381|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	NM_173731|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK141622|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK164164|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm9_v1_chr14_-_55224744_55224800	0.0192913	FOXD3.p2	BC029624|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene	BC034212|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene	NM_028890|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene	AK163117|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene
mm9_v1_chr12_+_8214912_8214977	0.0192801	FOXD3.p2	NM_172401|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK079099|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	NM_001167768|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	NM_001167767|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK076460|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK086717|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK162914|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	BC057311|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK036177|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK162850|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene
mm9_v1_chr1_+_174056868_174056950	0.0192548	FOXD3.p2	AK029368|Pex19|19298|peroxisomal biogenesis factor 19	NM_001159525|Pex19|19298|peroxisomal biogenesis factor 19	NM_023041|Pex19|19298|peroxisomal biogenesis factor 19	AK028449|Pex19|19298|peroxisomal biogenesis factor 19	AK075576|Pex19|19298|peroxisomal biogenesis factor 19	AK170175|Pex19|19298|peroxisomal biogenesis factor 19	AK012785|Pex19|19298|peroxisomal biogenesis factor 19	BC019767|Pex19|19298|peroxisomal biogenesis factor 19	Y09046|Pex19|19298|peroxisomal biogenesis factor 19	CT010305|Pex19|19298|peroxisomal biogenesis factor 19	BC012517|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr8_+_131237118_131237130	0.0190989	FOXD3.p2	AK076526|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr2_-_6134067_6134104	0.0188982	FOXD3.p2	AK014736|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3
mm9_v1_chr14_+_105658034_105658057	0.018878	FOXD3.p2	AK084288|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr14_-_47896531_47896541	0.0188557	FOXD3.p2	NM_172598|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1
mm9_v1_chr7_+_63185457_63185630	0.0188251	FOXD3.p2	AK195390|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	AK052509|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1
mm9_v1_chr16_+_44370127_44370136	0.0187077	FOXD3.p2	BC024956|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr14_+_70132570_70132619	0.0186578	FOXD3.p2	AK133329|4930480K23Rik|75016|RIKEN cDNA 4930480K23 gene
mm9_v1_chr7_-_35005925_35005938	0.0186378	FOXD3.p2	AK194043|Gpi1|14751|glucose phosphate isomerase 1	AK196108|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr6_+_64992861_64992872	0.0186162	FOXD3.p2	AK147884|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr10_-_89083993_89083997	0.0185945	FOXD3.p2	NM_182959|Slc17a8|216227|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8	BC042593|Slc17a8|216227|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
mm9_v1_chr18_+_22503589_22503589	0.0185023	FOXD3.p2	AK082659|Asxl3|211961|additional sex combs like 3 (Drosophila)	NM_001167777|Asxl3|211961|additional sex combs like 3 (Drosophila)
mm9_v1_chr8_-_109620413_109620444	0.0184904	FOXD3.p2	AK089419|Terf2|21750|telomeric repeat binding factor 2	BC046284|Terf2|21750|telomeric repeat binding factor 2	AK049507|Terf2|21750|telomeric repeat binding factor 2	NM_001083118|Terf2|21750|telomeric repeat binding factor 2	NM_009353|Terf2|21750|telomeric repeat binding factor 2
mm9_v1_chr2_+_129626252_129626487	0.0184127	FOXD3.p2	NM_001038635|Stk35|67333|serine/threonine kinase 35	NM_183262|Stk35|67333|serine/threonine kinase 35	BC138904|Stk35|67333|serine/threonine kinase 35	BC138905|Stk35|67333|serine/threonine kinase 35	AK165988|Stk35|67333|serine/threonine kinase 35	AK006778|Stk35|67333|serine/threonine kinase 35
mm9_v1_chr6_-_118089060_118089172	0.0183885	FOXD3.p2	AK028045|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK145992|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK160867|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK019496|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	NM_030165|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2
mm9_v1_chr19_-_7292057_7292085	0.0183884	FOXD3.p2	AK002218|Cox8a|12868|cytochrome c oxidase, subunit VIIIa
mm9_v1_chr1_-_128727208_128727208	0.0183699	FOXD3.p2	NM_001081756|Nckap5|210356|NCK-associated protein 5	NM_176957|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr17_+_49071906_49072030	0.0183437	FOXD3.p2	BC139418|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	NM_027452|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK122476|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK044375|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2
mm9_v1_chr9_-_57531452_57531467	0.0182872	FOXD3.p2	BC054827|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	K02589|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	NM_009993|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	X00479|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2
mm9_v1_chr15_+_3230053_3230123	0.0182169	FOXD3.p2	
mm9_v1_chr7_-_59261060_59261387	0.0182045	FOXD3.p2	AK005663|Svip|75744|small VCP/p97-interacting protein	AK029831|Svip|75744|small VCP/p97-interacting protein	BC100498|Svip|75744|small VCP/p97-interacting protein	BC049720|Svip|75744|small VCP/p97-interacting protein	AK133737|Svip|75744|small VCP/p97-interacting protein	AK018351|Svip|75744|small VCP/p97-interacting protein	AK158571|Svip|75744|small VCP/p97-interacting protein	NM_001160345|Svip|75744|small VCP/p97-interacting protein
mm9_v1_chr2_+_127034130_127034141	0.0181786	FOXD3.p2	AK039567|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	BC063261|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	NM_177214|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)
mm9_v1_chr6_+_73198498_73198722	0.0180936	FOXD3.p2	NM_019879|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK088888|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK005080|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK087390|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK002754|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AF144101|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK139288|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	BC011087|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK184184|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr11_+_86497546_86497594	0.0180087	FOXD3.p2	AK086996|Ptrh2|217057|peptidyl-tRNA hydrolase 2	AK031620|Ptrh2|217057|peptidyl-tRNA hydrolase 2	NM_001098810|Ptrh2|217057|peptidyl-tRNA hydrolase 2
mm9_v1_chr2_-_25463924_25464009	0.0179773	FOXD3.p2	BC085507|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	NM_001024616|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC021476|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC020111|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK081440|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK171643|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC058585|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC023692|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC051138|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK045520|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK081397|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK157020|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK077311|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK143678|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene
mm9_v1_chr4_+_34497840_34497946	0.0179161	FOXD3.p2	NM_001007589|Akirin2|433693|akirin 2	BC082305|Akirin2|433693|akirin 2
mm9_v1_chr11_-_84729844_84729889	0.017893	FOXD3.p2	BC089554|Znhit3|448850|zinc finger, HIT type 3	AK002888|Znhit3|448850|zinc finger, HIT type 3	AK003721|Znhit3|448850|zinc finger, HIT type 3	AK004259|Znhit3|448850|zinc finger, HIT type 3	NM_001005223|Znhit3|448850|zinc finger, HIT type 3	AK014350|Znhit3|448850|zinc finger, HIT type 3
mm9_v1_chrX_-_45388010_45388030	0.0177855	FOXD3.p2	BC020015|Apln|30878|apelin	DQ832282|Apln|30878|apelin	NM_013912|Apln|30878|apelin	AK042076|Apln|30878|apelin
mm9_v1_chr9_+_54434140_54434327	0.0177784	FOXD3.p2	AK158646|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK159051|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK117103|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK152353|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK159666|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK160054|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK150618|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK164038|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK168149|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK167822|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK151304|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK153459|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK168049|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK010065|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK032787|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK047951|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK168034|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK084523|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	BC049956|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	NM_029573|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK169152|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	BC034273|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha
mm9_v1_chr1_+_92509306_92509321	0.0177598	FOXD3.p2	AK185916|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK207412|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK215258|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK212344|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK218596|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK214410|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm9_v1_chr3_+_142428186_142428231	0.0177078	FOXD3.p2	AK146223|Gtf2b|229906|general transcription factor IIB	AK131856|Gtf2b|229906|general transcription factor IIB	AK133097|Gtf2b|229906|general transcription factor IIB	AK133825|Gtf2b|229906|general transcription factor IIB	AK143935|Gtf2b|229906|general transcription factor IIB	AK145403|Gtf2b|229906|general transcription factor IIB	AK146666|Gtf2b|229906|general transcription factor IIB	AK146910|Gtf2b|229906|general transcription factor IIB	AK151577|Gtf2b|229906|general transcription factor IIB	BC016637|Gtf2b|229906|general transcription factor IIB	NM_145546|Gtf2b|229906|general transcription factor IIB
mm9_v1_chr11_-_53520771_53520798	0.0176823	FOXD3.p2	BC058180|Rad50|19360|RAD50 homolog (S. cerevisiae)	U66887|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr12_-_46175433_46175475	0.0175964	FOXD3.p2	NM_144552|Stxbp6|217517|syntaxin binding protein 6 (amisyn)
mm9_v1_chr5_-_86539474_86539529	0.0175964	FOXD3.p2	AK017687|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr1_-_137268058_137268336	0.0175819	FOXD3.p2	AK199485|Shisa4|77552|shisa homolog 4 (Xenopus laevis)	AK212908|Shisa4|77552|shisa homolog 4 (Xenopus laevis)
mm9_v1_chr16_+_36914313_36914320	0.0175767	FOXD3.p2	AK220188|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr6_+_115803545_115803666	0.0175573	FOXD3.p2	NM_001167763|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	NM_031177|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK044456|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167330|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167412|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC060621|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK131115|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC066083|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC067415|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK031308|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)
mm9_v1_chr2_+_155215225_155215281	0.0174096	FOXD3.p2	AK079304|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr12_-_15822792_15822800	0.0172631	FOXD3.p2	AK080064|Trib2|217410|tribbles homolog 2 (Drosophila)	AK082329|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr19_+_6984187_6984287	0.0172212	FOXD3.p2	BC087959|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	NM_001166370|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	NM_026306|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	BC016191|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)
mm9_v1_chr11_+_43247252_43247280	0.0172116	FOXD3.p2	BC082780|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC025870|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK046262|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK029117|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK049178|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC060954|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr13_+_5860701_5860744	0.0171473	FOXD3.p2	NM_011803|Klf6|23849|Kruppel-like factor 6	AY027436|Klf6|23849|Kruppel-like factor 6
mm9_v1_chr17_-_29215905_29215915	0.0170151	FOXD3.p2	AK144811|LOC100499420|100499420|lincRNA-p21
mm9_v1_chr2_+_26483976_26484204	0.0169435	FOXD3.p2	AK045880|Fam69b|56279|family with sequence similarity 69, member B	NM_019833|Fam69b|56279|family with sequence similarity 69, member B	AB030186|Fam69b|56279|family with sequence similarity 69, member B	AF332189|Fam69b|56279|family with sequence similarity 69, member B	AK171112|Fam69b|56279|family with sequence similarity 69, member B	AK050584|Fam69b|56279|family with sequence similarity 69, member B	AK209016|Fam69b|56279|family with sequence similarity 69, member B	BC116751|Fam69b|56279|family with sequence similarity 69, member B	BC116779|Fam69b|56279|family with sequence similarity 69, member B	BC051954|Fam69b|56279|family with sequence similarity 69, member B	BC060081|Fam69b|56279|family with sequence similarity 69, member B
mm9_v1_chr10_+_80720062_80720086	0.0169201	FOXD3.p2	X89723|Matk|17179|megakaryocyte-associated tyrosine kinase	BC060086|Matk|17179|megakaryocyte-associated tyrosine kinase
mm9_v1_chr6_-_127076410_127076426	0.0169049	FOXD3.p2	AK011225|Ccnd2|12444|cyclin D2
mm9_v1_chr17_-_46782935_46782980	0.0168947	FOXD3.p2	BC005746|Klc4|74764|kinesin light chain 4	AK170793|Klc4|74764|kinesin light chain 4
mm9_v1_chr1_-_181476342_181476404	0.0168807	FOXD3.p2	BC138836|Tfb2m|15278|transcription factor B2, mitochondrial	BC138837|Tfb2m|15278|transcription factor B2, mitochondrial	AK167930|Tfb2m|15278|transcription factor B2, mitochondrial	M74555|Tfb2m|15278|transcription factor B2, mitochondrial	AK090106|Tfb2m|15278|transcription factor B2, mitochondrial	AK168970|Tfb2m|15278|transcription factor B2, mitochondrial	AK169138|Tfb2m|15278|transcription factor B2, mitochondrial	AK166717|Tfb2m|15278|transcription factor B2, mitochondrial	AK146563|Tfb2m|15278|transcription factor B2, mitochondrial	NM_008249|Tfb2m|15278|transcription factor B2, mitochondrial
mm9_v1_chr16_+_16870904_16870931	0.016827	FOXD3.p2	AB045324|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr4_+_116768960_116768960	0.0167857	FOXD3.p2	AB010833|Ptch2|19207|patched homolog 2	NM_008958|Ptch2|19207|patched homolog 2
mm9_v1_chr7_+_52965052_52965376	0.0167456	FOXD3.p2	AK192990|Dbp|13170|D site albumin promoter binding protein
mm9_v1_chr16_-_22657245_22657273	0.0167343	FOXD3.p2	AK220294|Dgkg|110197|diacylglycerol kinase, gamma	AK087972|Dgkg|110197|diacylglycerol kinase, gamma	AK085470|Dgkg|110197|diacylglycerol kinase, gamma
mm9_v1_chr2_-_110203138_110203154	0.0167205	FOXD3.p2	BC027250|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK003790|Fibin|67606|fin bud initiation factor homolog (zebrafish)	NM_026271|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr1_-_164478475_164478591	0.0166737	FOXD3.p2	BC014872|Mettl13|71449|methyltransferase like 13	NM_144877|Mettl13|71449|methyltransferase like 13
mm9_v1_chr2_-_60589953_60589966	0.016663	FOXD3.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr10_-_60227439_60227519	0.0166359	FOXD3.p2	AK084569|Unc5b|107449|unc-5 homolog B (C. elegans)	AK041547|Unc5b|107449|unc-5 homolog B (C. elegans)	AK159205|Unc5b|107449|unc-5 homolog B (C. elegans)
mm9_v1_chr18_+_52625323_52625373	0.0165744	FOXD3.p2	AK012865|Srfbp1|67222|serum response factor binding protein 1	NM_026040|Srfbp1|67222|serum response factor binding protein 1	AK144845|Srfbp1|67222|serum response factor binding protein 1	AK141882|Srfbp1|67222|serum response factor binding protein 1	AK147692|Srfbp1|67222|serum response factor binding protein 1	BC024338|Srfbp1|67222|serum response factor binding protein 1	AY611629|Srfbp1|67222|serum response factor binding protein 1
mm9_v1_chr1_+_24685475_24685527	0.0164909	FOXD3.p2	BC027774|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr6_-_124706435_124706619	0.0163566	FOXD3.p2	BC050920|Atn1|13498|atrophin 1	NM_007881|Atn1|13498|atrophin 1
mm9_v1_chr10_-_62784937_62784977	0.0163453	FOXD3.p2	AK139946|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)
mm9_v1_chr15_+_78859949_78859971	0.0162695	FOXD3.p2	
mm9_v1_chr15_-_97536204_97536244	0.0162689	FOXD3.p2	AK169097|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr12_+_111805938_111806039	0.016246	FOXD3.p2	AK047089|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK178752|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK196801|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK201559|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK211769|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr2_-_62249934_62250287	0.0162104	FOXD3.p2	X58384|Dpp4|13482|dipeptidylpeptidase 4	AK040409|Dpp4|13482|dipeptidylpeptidase 4	BC022183|Dpp4|13482|dipeptidylpeptidase 4	AK163085|Dpp4|13482|dipeptidylpeptidase 4	NM_001159543|Dpp4|13482|dipeptidylpeptidase 4	NM_010074|Dpp4|13482|dipeptidylpeptidase 4
mm9_v1_chr8_+_63471991_63472061	0.0161301	FOXD3.p2	AK173292|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AY850065|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	NM_175089|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK077047|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK045202|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC070443|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC157939|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC158009|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC172091|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1
mm9_v1_chr6_+_48689045_48689097	0.0160584	FOXD3.p2	NM_008376|Gimap1|16205|GTPase, IMAP family member 1	NM_175860|Gimap1|16205|GTPase, IMAP family member 1	AK156732|Gimap1|16205|GTPase, IMAP family member 1	BC132601|Gimap1|16205|GTPase, IMAP family member 1	BC132603|Gimap1|16205|GTPase, IMAP family member 1	AK169133|Gimap1|16205|GTPase, IMAP family member 1
mm9_v1_chr14_+_62218348_62218392	0.0160404	FOXD3.p2	NM_023233|Trim13|66597|tripartite motif-containing 13	AK013959|Trim13|66597|tripartite motif-containing 13	AK017850|Trim13|66597|tripartite motif-containing 13
mm9_v1_chrX_-_69520059_69520141	0.0160192	FOXD3.p2	AF189263|Gabre|14404|gamma-aminobutyric acid (GABA) A receptor, subunit epsilon	NM_017369|Gabre|14404|gamma-aminobutyric acid (GABA) A receptor, subunit epsilon	AK079258|Gabre|14404|gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
mm9_v1_chr16_-_48994214_48994235	0.0160072	FOXD3.p2	AK009865|Dzip3|224170|DAZ interacting protein 3, zinc finger	NM_001110017|Dzip3|224170|DAZ interacting protein 3, zinc finger	NM_027341|Dzip3|224170|DAZ interacting protein 3, zinc finger
mm9_v1_chr5_+_31916313_31916404	0.0159078	FOXD3.p2	NM_025796|Mrpl33|66845|mitochondrial ribosomal protein L33	AB049651|Mrpl33|66845|mitochondrial ribosomal protein L33	AK167883|Mrpl33|66845|mitochondrial ribosomal protein L33	AK002421|Mrpl33|66845|mitochondrial ribosomal protein L33	AK008431|Mrpl33|66845|mitochondrial ribosomal protein L33	AK021173|Mrpl33|66845|mitochondrial ribosomal protein L33	AK165856|Mrpl33|66845|mitochondrial ribosomal protein L33	BC059722|Mrpl33|66845|mitochondrial ribosomal protein L33	BC051471|Mrpl33|66845|mitochondrial ribosomal protein L33	BC027018|Mrpl33|66845|mitochondrial ribosomal protein L33	BC037363|Mrpl33|66845|mitochondrial ribosomal protein L33	BC055724|Mrpl33|66845|mitochondrial ribosomal protein L33	AK041771|Mrpl33|66845|mitochondrial ribosomal protein L33	BC006029|Mrpl33|66845|mitochondrial ribosomal protein L33
mm9_v1_chr3_+_88342459_88342597	0.0158904	FOXD3.p2	AK012557|Mex3a|72640|mex3 homolog A (C. elegans)
mm9_v1_chr7_+_121184667_121184743	0.0158746	FOXD3.p2	AK084717|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr12_-_15823590_15823683	0.0158409	FOXD3.p2	NM_144551|Trib2|217410|tribbles homolog 2 (Drosophila)	AK144192|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr11_+_49064088_49064104	0.0158387	FOXD3.p2	AK087959|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	BC006629|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr3_+_157229838_157229863	0.0158167	FOXD3.p2	BC058742|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	NM_011196|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	D10204|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	D13321|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	D17406|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)
mm9_v1_chr12_+_33832641_33832680	0.0157506	FOXD3.p2	AK013145|Atxn7l1|380753|ataxin 7-like 1	BC100598|Atxn7l1|380753|ataxin 7-like 1	BC017546|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr17_+_25270317_25270453	0.015704	FOXD3.p2	AK030444|Clcn7|26373|chloride channel 7	NM_011930|Clcn7|26373|chloride channel 7	BC054799|Clcn7|26373|chloride channel 7	BC050907|Clcn7|26373|chloride channel 7	BC053049|Clcn7|26373|chloride channel 7	AK128981|Clcn7|26373|chloride channel 7
mm9_v1_chr13_+_4058817_4058874	0.0156836	FOXD3.p2	AK086887|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK033537|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK136528|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC013482|Akr1c14|105387|aldo-keto reductase family 1, member C14	NM_134072|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC026628|Akr1c14|105387|aldo-keto reductase family 1, member C14	AY730283|Akr1c14|105387|aldo-keto reductase family 1, member C14
mm9_v1_chr15_+_101904203_101904238	0.0156433	FOXD3.p2	NM_145625|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr9_-_59988919_59989026	0.0155952	FOXD3.p2	BC139329|Thsd4|207596|thrombospondin, type I, domain containing 4	AK045414|Thsd4|207596|thrombospondin, type I, domain containing 4	NM_172444|Thsd4|207596|thrombospondin, type I, domain containing 4
mm9_v1_chr12_+_86629540_86629669	0.0155815	FOXD3.p2	NM_172414|Fam164c|72350|family with sequence similarity 164, member C	AK036602|Fam164c|72350|family with sequence similarity 164, member C	BC049940|Fam164c|72350|family with sequence similarity 164, member C	AK032455|Fam164c|72350|family with sequence similarity 164, member C	AK033213|Fam164c|72350|family with sequence similarity 164, member C	AK012642|Fam164c|72350|family with sequence similarity 164, member C
mm9_v1_chr8_-_59966523_59966681	0.0155254	FOXD3.p2	BC132081|Sap30|60406|sin3 associated polypeptide	BC132087|Sap30|60406|sin3 associated polypeptide	AK088745|Sap30|60406|sin3 associated polypeptide	BC037768|Sap30|60406|sin3 associated polypeptide	AF075136|Sap30|60406|sin3 associated polypeptide	AK010928|Sap30|60406|sin3 associated polypeptide	NM_021788|Sap30|60406|sin3 associated polypeptide
mm9_v1_chr1_-_183441581_183441581	0.015438	FOXD3.p2	NM_207280|Ccdc121|403180|coiled-coil domain containing 121
mm9_v1_chr7_-_16552844_16552883	0.0153781	FOXD3.p2	AK050243|Ehd2|259300|EH-domain containing 2	AK031203|Ehd2|259300|EH-domain containing 2	NM_153068|Ehd2|259300|EH-domain containing 2
mm9_v1_chr4_-_49857641_49857765	0.0153487	FOXD3.p2	AK173314|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chr10_-_128706371_128706376	0.0153176	FOXD3.p2	BC104277|Olfr777|258537|olfactory receptor 777	BC104276|Olfr777|258537|olfactory receptor 777	NM_146544|Olfr777|258537|olfactory receptor 777
mm9_v1_chr9_-_119213954_119213965	0.0152647	FOXD3.p2	AK031790|Oxsr1|108737|oxidative-stress responsive 1	AK075837|Oxsr1|108737|oxidative-stress responsive 1	NM_133985|Oxsr1|108737|oxidative-stress responsive 1
mm9_v1_chr7_-_87065480_87065546	0.0151904	FOXD3.p2	U91933|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	BC060236|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	BC028319|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK037336|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK028372|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK083911|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK150085|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	NM_009682|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit
mm9_v1_chr19_+_4099973_4100180	0.015184	FOXD3.p2	AK155377|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AF006467|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	NM_001136078|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK177924|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK179862|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK181080|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK188056|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK188611|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK208861|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK210105|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK210471|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK212060|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK187966|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1
mm9_v1_chr1_+_19198994_19199078	0.0151766	FOXD3.p2	AK017373|Tcfap2b|21419|transcription factor AP-2 beta	NM_009334|Tcfap2b|21419|transcription factor AP-2 beta	AK005128|Tcfap2b|21419|transcription factor AP-2 beta	AK028906|Tcfap2b|21419|transcription factor AP-2 beta	X78197|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr10_+_80102813_80103107	0.0151299	FOXD3.p2	AK180542|Csnk1g2|103236|casein kinase 1, gamma 2	AK182278|Csnk1g2|103236|casein kinase 1, gamma 2	AK184141|Csnk1g2|103236|casein kinase 1, gamma 2	AK184876|Csnk1g2|103236|casein kinase 1, gamma 2	AK013192|Csnk1g2|103236|casein kinase 1, gamma 2
mm9_v1_chr11_+_119464218_119464296	0.01508	FOXD3.p2	AK161011|Rptor|74370|regulatory associated protein of MTOR, complex 1
mm9_v1_chr17_-_36179615_36179686	0.0150631	FOXD3.p2	M35243|H2-T22|15039|histocompatibility 2, T region locus 22	M35247|H2-T22|15039|histocompatibility 2, T region locus 22	BC003819|H2-T22|15039|histocompatibility 2, T region locus 22	M35248|H2-T9|15051|histocompatibility 2, T region locus 9	NM_010399|H2-T9|15051|histocompatibility 2, T region locus 9	AK161744|H2-T22|15039|histocompatibility 2, T region locus 22	M35245|H2-T22|15039|histocompatibility 2, T region locus 22	NM_010397|H2-T22|15039|histocompatibility 2, T region locus 22	AK162874|H2-T22|15039|histocompatibility 2, T region locus 22	AK133985|H2-T22|15039|histocompatibility 2, T region locus 22
mm9_v1_chr15_-_98661877_98661941	0.0150628	FOXD3.p2	AK159583|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	BC086660|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	AK138324|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	AF036535|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	NM_016781|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit
mm9_v1_chr15_-_74539699_74539729	0.0148884	FOXD3.p2	AK171809|Jrk|16469|jerky	AK042652|Jrk|16469|jerky	AK043134|Jrk|16469|jerky
mm9_v1_chr3_-_107877121_107877254	0.0148441	FOXD3.p2	AK196006|Ampd2|109674|adenosine monophosphate deaminase 2
mm9_v1_chr19_+_42164922_42164992	0.0147723	FOXD3.p2	NM_145501|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	AK030725|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC110363|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC089309|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha
mm9_v1_chr19_-_40624894_40625122	0.014761	FOXD3.p2	AK195951|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1
mm9_v1_chrX_+_50373295_50373321	0.0147014	FOXD3.p2	AY423851|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase
mm9_v1_chr2_+_90858663_90858815	0.0146166	FOXD3.p2	AK080832|Celf1|13046|CUGBP, Elav-like family member 1	AK160135|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr6_-_82602836_82602872	0.0145847	FOXD3.p2	BC023189|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK167631|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK010135|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK010300|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	NM_025882|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK145365|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK011595|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK160582|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)
mm9_v1_chr17_+_17539635_17539669	0.0144721	FOXD3.p2	BC049574|Lix1|66643|limb expression 1 homolog (chicken)	NM_025681|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr17_+_70911084_70911126	0.0144705	FOXD3.p2	NM_001128181|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK136926|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr19_+_55328128_55328228	0.0144349	FOXD3.p2	AK150542|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK150663|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK145894|Acsl5|433256|acyl-CoA synthetase long-chain family member 5
mm9_v1_chr13_+_55802874_55802961	0.0144169	FOXD3.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr12_-_31058094_31058250	0.0143948	FOXD3.p2	AF367760|Sntg2|268534|syntrophin, gamma 2	BC058204|Sntg2|268534|syntrophin, gamma 2	BC138956|Sntg2|268534|syntrophin, gamma 2	BC145476|Sntg2|268534|syntrophin, gamma 2	AK008673|Sntg2|268534|syntrophin, gamma 2	AK035310|Sntg2|268534|syntrophin, gamma 2	AK087560|Sntg2|268534|syntrophin, gamma 2	AK137345|Sntg2|268534|syntrophin, gamma 2	NM_172951|Sntg2|268534|syntrophin, gamma 2
mm9_v1_chr15_-_71558142_71558267	0.0143835	FOXD3.p2	BC125645|Fam135b|70363|family with sequence similarity 135, member B	BC125647|Fam135b|70363|family with sequence similarity 135, member B	AK043571|Fam135b|70363|family with sequence similarity 135, member B	NM_177819|Fam135b|70363|family with sequence similarity 135, member B
mm9_v1_chr7_-_20262106_20262119	0.014366	FOXD3.p2	AK146468|Apoc2|11813|apolipoprotein C-II	Z15090|Apoc2|11813|apolipoprotein C-II
mm9_v1_chr17_+_57136748_57136795	0.0143526	FOXD3.p2	AK010930|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)	AK009812|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)	NM_025538|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)	AK007380|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)	BC029677|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)
mm9_v1_chr3_-_27610155_27610257	0.0143209	FOXD3.p2	AK045099|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr2_-_174092557_174092559	0.0142981	FOXD3.p2	
mm9_v1_chr4_-_109149038_109149266	0.0142452	FOXD3.p2	BC010299|Rnf11|29864|ring finger protein 11	NM_013876|Rnf11|29864|ring finger protein 11	AK014254|Rnf11|29864|ring finger protein 11
mm9_v1_chrX_+_82293610_82293751	0.0141577	FOXD3.p2	AK045257|Dmd|13405|dystrophin, muscular dystrophy	AK013510|Dmd|13405|dystrophin, muscular dystrophy	AK075809|Dmd|13405|dystrophin, muscular dystrophy	AK087829|Dmd|13405|dystrophin, muscular dystrophy	AK036936|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chr11_-_68770359_68770398	0.01415	FOXD3.p2	BC089365|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15	NM_177566|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15
mm9_v1_chr4_+_141102699_141102736	0.0140935	FOXD3.p2	AK082239|B330016D10Rik|320456|RIKEN cDNA B330016D10 gene	AK043314|B330016D10Rik|320456|RIKEN cDNA B330016D10 gene	AK148126|B330016D10Rik|320456|RIKEN cDNA B330016D10 gene
mm9_v1_chr10_+_98478207_98478246	0.0139291	FOXD3.p2	BC025199|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr14_+_105658009_105658029	0.0139011	FOXD3.p2	AK049678|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr5_+_143734622_143734709	0.0138434	FOXD3.p2	
mm9_v1_chr2_+_136717324_136717369	0.0137602	FOXD3.p2	BC067037|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr13_+_49704471_49704523	0.0137567	FOXD3.p2	AK075638|Ogn|18295|osteoglycin	AK163772|Ogn|18295|osteoglycin	D31951|Ogn|18295|osteoglycin	BC021939|Ogn|18295|osteoglycin
mm9_v1_chr14_-_14953416_14953474	0.0137346	FOXD3.p2	BC006869|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	NM_025550|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK002343|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK010287|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AJ252147|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
mm9_v1_chr1_+_184695026_184695133	0.0137023	FOXD3.p2	BC021842|Susd4|96935|sushi domain containing 4	NM_144796|Susd4|96935|sushi domain containing 4	AK035779|Susd4|96935|sushi domain containing 4	AK088629|Susd4|96935|sushi domain containing 4
mm9_v1_chr4_+_128820458_128820467	0.0136758	FOXD3.p2	AK137327|Fndc5|384061|fibronectin type III domain containing 5
mm9_v1_chr16_+_23989051_23989160	0.0136589	FOXD3.p2	
mm9_v1_chr4_-_136891931_136891995	0.0136524	FOXD3.p2	AK213611|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	M79301|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L11318|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L78075|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr17_+_35654060_35654165	0.0136515	FOXD3.p2	BC018431|Cchcr1|240084|coiled-coil alpha-helical rod protein 1	NM_146248|Cchcr1|240084|coiled-coil alpha-helical rod protein 1	BC031416|Cchcr1|240084|coiled-coil alpha-helical rod protein 1	AK159780|Cchcr1|240084|coiled-coil alpha-helical rod protein 1	AK216971|Cchcr1|240084|coiled-coil alpha-helical rod protein 1
mm9_v1_chr8_+_24168730_24168785	0.0135877	FOXD3.p2	AK147483|Ank1|11733|ankyrin 1, erythroid	NM_031158|Ank1|11733|ankyrin 1, erythroid	X69063|Ank1|11733|ankyrin 1, erythroid	AK147597|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr5_+_34974750_34974884	0.0135782	FOXD3.p2	
mm9_v1_chr13_+_98011206_98011243	0.013374	FOXD3.p2	U65079|Enc1|13803|ectodermal-neural cortex 1	AK008709|Enc1|13803|ectodermal-neural cortex 1
mm9_v1_chr2_+_83484637_83484674	0.0133701	FOXD3.p2	AK005661|Zc3h15|69082|zinc finger CCCH-type containing 15	AK139511|Zc3h15|69082|zinc finger CCCH-type containing 15	AK012012|Zc3h15|69082|zinc finger CCCH-type containing 15	AK152374|Zc3h15|69082|zinc finger CCCH-type containing 15	AK167696|Zc3h15|69082|zinc finger CCCH-type containing 15	AK159596|Zc3h15|69082|zinc finger CCCH-type containing 15
mm9_v1_chr17_-_81464406_81464435	0.0132746	FOXD3.p2	AK012806|Thumpd2|72167|THUMP domain containing 2	NM_028138|Thumpd2|72167|THUMP domain containing 2
mm9_v1_chr4_-_94269846_94269942	0.0131938	FOXD3.p2	BC139773|Plaa|18786|phospholipase A2, activating protein	AK075934|Plaa|18786|phospholipase A2, activating protein	BC139355|Plaa|18786|phospholipase A2, activating protein	BC139356|Plaa|18786|phospholipase A2, activating protein	NM_172695|Plaa|18786|phospholipase A2, activating protein	AK019070|Plaa|18786|phospholipase A2, activating protein
mm9_v1_chr17_+_46247928_46248012	0.0131937	FOXD3.p2	AB049953|Mrps18a|68565|mitochondrial ribosomal protein S18A	AK003444|Mrps18a|68565|mitochondrial ribosomal protein S18A	NM_026768|Mrps18a|68565|mitochondrial ribosomal protein S18A	AK028226|Mrps18a|68565|mitochondrial ribosomal protein S18A	AK172171|Mrps18a|68565|mitochondrial ribosomal protein S18A	BC058959|Mrps18a|68565|mitochondrial ribosomal protein S18A
mm9_v1_chr5_-_137463376_137463426	0.0131135	FOXD3.p2	AK012199|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr2_+_97306600_97306623	0.0130665	FOXD3.p2	
mm9_v1_chr14_-_73762840_73762848	0.0130402	FOXD3.p2	AK205546|Itm2b|16432|integral membrane protein 2B	AK205709|Itm2b|16432|integral membrane protein 2B	AK209176|Itm2b|16432|integral membrane protein 2B	AK215843|Itm2b|16432|integral membrane protein 2B	AK217202|Itm2b|16432|integral membrane protein 2B	AK218926|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr11_-_4987973_4988127	0.0129982	FOXD3.p2	AK178351|Ewsr1|14030|Ewing sarcoma breakpoint region 1
mm9_v1_chr3_+_90346956_90347018	0.0129601	FOXD3.p2	AK002991|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr18_+_77365613_77365672	0.012905	FOXD3.p2	AK078097|Pias2|17344|protein inhibitor of activated STAT 2
mm9_v1_chr5_-_123271283_123271353	0.0128962	FOXD3.p2	AK147951|Anapc5|59008|anaphase-promoting complex subunit 5	BC046804|Anapc5|59008|anaphase-promoting complex subunit 5	AK075969|Anapc5|59008|anaphase-promoting complex subunit 5	AK159713|Anapc5|59008|anaphase-promoting complex subunit 5	AK159916|Anapc5|59008|anaphase-promoting complex subunit 5	AK167561|Anapc5|59008|anaphase-promoting complex subunit 5	AK168737|Anapc5|59008|anaphase-promoting complex subunit 5	AK168814|Anapc5|59008|anaphase-promoting complex subunit 5	AB041593|Anapc5|59008|anaphase-promoting complex subunit 5	AK151314|Anapc5|59008|anaphase-promoting complex subunit 5	AK151905|Anapc5|59008|anaphase-promoting complex subunit 5	AK152981|Anapc5|59008|anaphase-promoting complex subunit 5	AK153373|Anapc5|59008|anaphase-promoting complex subunit 5	AK153422|Anapc5|59008|anaphase-promoting complex subunit 5	AK159204|Anapc5|59008|anaphase-promoting complex subunit 5	AK148679|Anapc5|59008|anaphase-promoting complex subunit 5	AK049719|Anapc5|59008|anaphase-promoting complex subunit 5	AK169196|Anapc5|59008|anaphase-promoting complex subunit 5	AK088327|Anapc5|59008|anaphase-promoting complex subunit 5	NM_001042491|Anapc5|59008|anaphase-promoting complex subunit 5	NM_021505|Anapc5|59008|anaphase-promoting complex subunit 5
mm9_v1_chr8_-_37631772_37631789	0.0128613	FOXD3.p2	BC048730|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr5_+_32761560_32761602	0.0128251	FOXD3.p2	AK169379|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr4_+_147976641_147976774	0.0127627	FOXD3.p2	NM_001003893|Masp2|17175|mannan-binding lectin serine peptidase 2	NM_010767|Masp2|17175|mannan-binding lectin serine peptidase 2	AJ250369|Masp2|17175|mannan-binding lectin serine peptidase 2	AK050052|Masp2|17175|mannan-binding lectin serine peptidase 2	AK149421|Masp2|17175|mannan-binding lectin serine peptidase 2	Y19160|Masp2|17175|mannan-binding lectin serine peptidase 2	Y19163|Masp2|17175|mannan-binding lectin serine peptidase 2	BC013893|Masp2|17175|mannan-binding lectin serine peptidase 2
mm9_v1_chr17_-_36157472_36157645	0.0127622	FOXD3.p2	NM_008207|H2-T24|15042|histocompatibility 2, T region locus 24
mm9_v1_chrX_+_53708015_53708070	0.0126996	FOXD3.p2	NM_172779|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK031945|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	BC051161|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK083942|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK160627|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm9_v1_chr3_+_81736518_81736645	0.0126883	FOXD3.p2	AK143683|Ctso|229445|cathepsin O	AK034490|Ctso|229445|cathepsin O	NM_177662|Ctso|229445|cathepsin O	AK020735|Ctso|229445|cathepsin O	AK040071|Ctso|229445|cathepsin O	AK049470|Ctso|229445|cathepsin O	AK166103|Ctso|229445|cathepsin O	BC098219|Ctso|229445|cathepsin O	AK165930|Ctso|229445|cathepsin O	BC044664|Ctso|229445|cathepsin O
mm9_v1_chr7_-_133929984_133930019	0.0125644	FOXD3.p2	AK199030|Ppp4c|56420|protein phosphatase 4, catalytic subunit
mm9_v1_chr11_+_50191220_50191290	0.0125599	FOXD3.p2	NM_021510|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	BC016459|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	AK052983|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	AK088169|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	Y14196|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	BC042187|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	BC056224|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1
mm9_v1_chr17_+_24078962_24078969	0.0125193	FOXD3.p2	BC049605|Sbp|20234|spermine binding protein	NM_011321|Sbp|20234|spermine binding protein	X06246|Sbp|20234|spermine binding protein
mm9_v1_chr19_-_6532339_6532383	0.0124997	FOXD3.p2	AK045662|Gm14964|100008567|predicted gene 14964
mm9_v1_chr11_-_121090513_121090656	0.012406	FOXD3.p2	BC026616|BC017643|217370|cDNA sequence BC017643	AK158402|BC017643|217370|cDNA sequence BC017643	AK170767|BC017643|217370|cDNA sequence BC017643	BC017643|BC017643|217370|cDNA sequence BC017643	NM_144832|BC017643|217370|cDNA sequence BC017643	AK159453|BC017643|217370|cDNA sequence BC017643	AK168104|BC017643|217370|cDNA sequence BC017643	BC027406|BC017643|217370|cDNA sequence BC017643	AK145884|BC017643|217370|cDNA sequence BC017643
mm9_v1_chr8_-_97958738_97958768	0.012373	FOXD3.p2	AK172603|Gtl3|14894|gene trap locus 3	NM_008187|Gtl3|14894|gene trap locus 3
mm9_v1_chr16_-_95680627_95680683	0.012367	FOXD3.p2	
mm9_v1_chr8_+_74675802_74675827	0.0123395	FOXD3.p2	
mm9_v1_chr7_+_144629356_144629410	0.0122742	FOXD3.p2	
mm9_v1_chr14_-_21437545_21437583	0.0122322	FOXD3.p2	AK047620|Usp54|78787|ubiquitin specific peptidase 54	NM_030180|Usp54|78787|ubiquitin specific peptidase 54
mm9_v1_chr11_-_69485800_69485832	0.0121248	FOXD3.p2	BC099392|Eif4a1|13681|eukaryotic translation initiation factor 4A1	BC012282|Eif4a1|13681|eukaryotic translation initiation factor 4A1	BC049915|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169030|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166527|Eif4a1|13681|eukaryotic translation initiation factor 4A1	X03039|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK159643|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167205|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK168697|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169156|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK011529|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK077429|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK135752|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK135994|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK144850|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK146464|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166439|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167003|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167083|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167988|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK168780|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169023|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169057|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169279|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166572|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK088124|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK145375|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK145508|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK146424|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK152694|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK162017|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166674|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167196|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167906|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK010644|Eif4a1|13681|eukaryotic translation initiation factor 4A1
mm9_v1_chr8_+_26707480_26707573	0.0120939	FOXD3.p2	AK054186|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene	AK085892|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene
mm9_v1_chr9_-_58160966_58161035	0.0120578	FOXD3.p2	BC098243|Loxl1|16949|lysyl oxidase-like 1	BC037999|Loxl1|16949|lysyl oxidase-like 1	AK078512|Loxl1|16949|lysyl oxidase-like 1	NM_010729|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr8_+_97362292_97362384	0.0119685	FOXD3.p2	AK154343|Coq9|67914|coenzyme Q9 homolog (yeast)	AK158979|Coq9|67914|coenzyme Q9 homolog (yeast)	AK009179|Coq9|67914|coenzyme Q9 homolog (yeast)	BC036386|Coq9|67914|coenzyme Q9 homolog (yeast)	NM_026452|Coq9|67914|coenzyme Q9 homolog (yeast)	AK217654|Coq9|67914|coenzyme Q9 homolog (yeast)
mm9_v1_chr14_+_61351770_61351875	0.0119637	FOXD3.p2	AK151394|Spata13|219140|spermatogenesis associated 13
mm9_v1_chr11_-_48927255_48927258	0.0119036	FOXD3.p2	BC110470|Olfr1396|258334|olfactory receptor 1396	BC110471|Olfr1396|258334|olfactory receptor 1396	NM_146337|Olfr1396|258334|olfactory receptor 1396
mm9_v1_chr6_-_108135548_108135588	0.0118638	FOXD3.p2	BC026981|Sumf1|58911|sulfatase modifying factor 1	AK160917|Sumf1|58911|sulfatase modifying factor 1	AK159192|Sumf1|58911|sulfatase modifying factor 1	AK161203|Sumf1|58911|sulfatase modifying factor 1	AK151874|Sumf1|58911|sulfatase modifying factor 1	NM_145937|Sumf1|58911|sulfatase modifying factor 1
mm9_v1_chr17_-_24664876_24664899	0.0118472	FOXD3.p2	NM_001172113|Traf7|224619|TNF receptor-associated factor 7	NM_001172114|Traf7|224619|TNF receptor-associated factor 7	NM_153792|Traf7|224619|TNF receptor-associated factor 7
mm9_v1_chr19_-_41068625_41068698	0.0118472	FOXD3.p2	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr11_+_31770920_31770944	0.0118298	FOXD3.p2	AK173229|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4
mm9_v1_chr11_+_95720178_95720317	0.0117716	FOXD3.p2	AK014714|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene	AK133925|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene
mm9_v1_chr9_-_56776162_56776198	0.011755	FOXD3.p2	AK142274|Snx33|235406|sorting nexin 33	NM_175483|Snx33|235406|sorting nexin 33
mm9_v1_chr13_-_43266716_43266788	0.0117534	FOXD3.p2	BC125307|Tbc1d7|67046|TBC1 domain family, member 7	BC125309|Tbc1d7|67046|TBC1 domain family, member 7	BC145156|Tbc1d7|67046|TBC1 domain family, member 7	BC145157|Tbc1d7|67046|TBC1 domain family, member 7	AK011356|Tbc1d7|67046|TBC1 domain family, member 7	NM_025935|Tbc1d7|67046|TBC1 domain family, member 7	AK156543|Tbc1d7|67046|TBC1 domain family, member 7
mm9_v1_chr4_+_58298833_58298983	0.0117518	FOXD3.p2	NM_001037127|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037128|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037129|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037130|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001165996|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_010944|Musk|18198|muscle, skeletal, receptor tyrosine kinase	U37708|Musk|18198|muscle, skeletal, receptor tyrosine kinase	U37709|Musk|18198|muscle, skeletal, receptor tyrosine kinase	BC100342|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY360453|Musk|18198|muscle, skeletal, receptor tyrosine kinase	X86444|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955296|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955297|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955298|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY956403|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY956404|Musk|18198|muscle, skeletal, receptor tyrosine kinase
mm9_v1_chr8_+_73051651_73051898	0.0117479	FOXD3.p2	AK167663|Fkbp8|14232|FK506 binding protein 8	AK158155|Fkbp8|14232|FK506 binding protein 8	AY278608|Fkbp8|14232|FK506 binding protein 8	BC027808|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr17_-_45736533_45736548	0.0117441	FOXD3.p2	AK050089|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr7_-_140179678_140180024	0.0117413	FOXD3.p2	AK187460|Ctbp2|13017|C-terminal binding protein 2	AK161077|Ctbp2|13017|C-terminal binding protein 2	AK198744|Ctbp2|13017|C-terminal binding protein 2	AK199198|Ctbp2|13017|C-terminal binding protein 2	AK201071|Ctbp2|13017|C-terminal binding protein 2	AK217772|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr8_+_13060907_13061026	0.0116567	FOXD3.p2	AK008819|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	NM_025834|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	BC024104|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	BC038045|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	AK005011|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein
mm9_v1_chr3_+_116265890_116265995	0.0116419	FOXD3.p2	AK035072|Lrrc39|109245|leucine rich repeat containing 39	NM_027321|Lrrc39|109245|leucine rich repeat containing 39	NM_175413|Lrrc39|109245|leucine rich repeat containing 39	AK039277|Lrrc39|109245|leucine rich repeat containing 39	AK079125|Lrrc39|109245|leucine rich repeat containing 39	AK008119|Lrrc39|109245|leucine rich repeat containing 39	AK052159|Lrrc39|109245|leucine rich repeat containing 39	BC119529|Lrrc39|109245|leucine rich repeat containing 39	BC119530|Lrrc39|109245|leucine rich repeat containing 39	AK046671|Lrrc39|109245|leucine rich repeat containing 39
mm9_v1_chr12_+_17277227_17277235	0.0115217	FOXD3.p2	AK192703|Pdia6|71853|protein disulfide isomerase associated 6
mm9_v1_chr19_+_11592938_11593140	0.0115047	FOXD3.p2	AF237909|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	NM_027209|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK172345|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	BC027425|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK075671|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK007613|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B
mm9_v1_chr6_-_25639351_25639449	0.0115019	FOXD3.p2	
mm9_v1_chr18_+_53405363_53405427	0.0114376	FOXD3.p2	AK012711|Snx24|69226|sorting nexing 24	AK017610|Snx24|69226|sorting nexing 24
mm9_v1_chr13_+_4433567_4433656	0.0113653	FOXD3.p2	AK149458|Akr1c6|83702|aldo-keto reductase family 1, member C6	NM_030611|Akr1c6|83702|aldo-keto reductase family 1, member C6	BC056643|Akr1c6|83702|aldo-keto reductase family 1, member C6	D45850|Akr1c6|83702|aldo-keto reductase family 1, member C6
mm9_v1_chr5_+_75471625_75471626	0.0113314	FOXD3.p2	NM_133256|Gsx2|14843|GS homeobox 2	S79041|Gsx2|14843|GS homeobox 2	BC119464|Gsx2|14843|GS homeobox 2	BC119465|Gsx2|14843|GS homeobox 2
mm9_v1_chr17_+_8118823_8118919	0.0113157	FOXD3.p2	NM_145968|Tagap|72536|T-cell activation Rho GTPase-activating protein	BC030886|Tagap|72536|T-cell activation Rho GTPase-activating protein	BC039780|Tagap|72536|T-cell activation Rho GTPase-activating protein	BC150728|Tagap|72536|T-cell activation Rho GTPase-activating protein
mm9_v1_chr1_-_154725297_154725297	0.0113132	FOXD3.p2	AK129101|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001160257|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr13_-_55629845_55629941	0.0112337	FOXD3.p2	AK137520|Dok3|27261|docking protein 3	AF237580|Dok3|27261|docking protein 3	BC116922|Dok3|27261|docking protein 3	BC120535|Dok3|27261|docking protein 3	AF179242|Dok3|27261|docking protein 3	NM_013739|Dok3|27261|docking protein 3	AK154412|Dok3|27261|docking protein 3	AK154750|Dok3|27261|docking protein 3	AK155180|Dok3|27261|docking protein 3	AK156060|Dok3|27261|docking protein 3	AK172511|Dok3|27261|docking protein 3
mm9_v1_chr2_+_37056762_37056762	0.011233	FOXD3.p2	NM_146662|Olfr365|258656|olfactory receptor 365
mm9_v1_chrX_-_131117602_131117692	0.0112298	FOXD3.p2	BC053392|Btk|12229|Bruton agammaglobulinemia tyrosine kinase	L29788|Btk|12229|Bruton agammaglobulinemia tyrosine kinase	L08967|Btk|12229|Bruton agammaglobulinemia tyrosine kinase	NM_013482|Btk|12229|Bruton agammaglobulinemia tyrosine kinase	L10627|Btk|12229|Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr17_-_80689815_80689815	0.0111382	FOXD3.p2	BC062952|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_001163759|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_198942|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr2_-_57905140_57905276	0.0111021	FOXD3.p2	DQ334270|Ermn|77767|ermin, ERM-like protein	BC089515|Ermn|77767|ermin, ERM-like protein	NM_029972|Ermn|77767|ermin, ERM-like protein	BC090670|Ermn|77767|ermin, ERM-like protein	AK078089|Ermn|77767|ermin, ERM-like protein	AK136820|Ermn|77767|ermin, ERM-like protein	AK137305|Ermn|77767|ermin, ERM-like protein	AK020733|Ermn|77767|ermin, ERM-like protein	AK220372|Ermn|77767|ermin, ERM-like protein
mm9_v1_chr12_+_4850202_4850209	0.0110783	FOXD3.p2	AK170427|BC068281|238037|cDNA sequence BC068281
mm9_v1_chr6_-_122806122_122806175	0.0110617	FOXD3.p2	AK154229|C3ar1|12267|complement component 3a receptor 1	NM_009779|C3ar1|12267|complement component 3a receptor 1	AK054017|C3ar1|12267|complement component 3a receptor 1
mm9_v1_chr7_-_34926055_34926067	0.0110487	FOXD3.p2	AK213025|Uba2|50995|ubiquitin-like modifier activating enzyme 2
mm9_v1_chr5_-_66543123_66543228	0.0110031	FOXD3.p2	AK170082|Rbm47|245945|RNA binding motif protein 47	NM_001127382|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr13_+_31898501_31898514	0.0109058	FOXD3.p2	BC027689|Foxc1|17300|forkhead box C1	NM_008592|Foxc1|17300|forkhead box C1
mm9_v1_chr14_+_99499149_99499178	0.0108648	FOXD3.p2	AK045133|Pibf1|52023|progesterone immunomodulatory binding factor 1	AK030385|Pibf1|52023|progesterone immunomodulatory binding factor 1	BC113804|Pibf1|52023|progesterone immunomodulatory binding factor 1	BC129811|Pibf1|52023|progesterone immunomodulatory binding factor 1	BC129812|Pibf1|52023|progesterone immunomodulatory binding factor 1	AK050974|Pibf1|52023|progesterone immunomodulatory binding factor 1	AK015781|Pibf1|52023|progesterone immunomodulatory binding factor 1
mm9_v1_chr16_+_14906698_14906846	0.0108312	FOXD3.p2	AK042748|Efcab1|66793|EF hand calcium binding domain 1	AK015866|Efcab1|66793|EF hand calcium binding domain 1	AK030381|Efcab1|66793|EF hand calcium binding domain 1	AK038735|Efcab1|66793|EF hand calcium binding domain 1	AK077722|Efcab1|66793|EF hand calcium binding domain 1	AK017267|Efcab1|66793|EF hand calcium binding domain 1	NM_025769|Efcab1|66793|EF hand calcium binding domain 1	AK015426|Efcab1|66793|EF hand calcium binding domain 1	AK043519|Efcab1|66793|EF hand calcium binding domain 1	BC085167|Efcab1|66793|EF hand calcium binding domain 1
mm9_v1_chr2_-_90744808_90744892	0.0108148	FOXD3.p2	AK160888|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC027270|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC119267|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC119269|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	AK002501|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	AK088337|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	NM_026688|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3
mm9_v1_chr16_-_30267577_30267656	0.0106969	FOXD3.p2	BC025836|Cpn2|71756|carboxypeptidase N, polypeptide 2	AK005049|Cpn2|71756|carboxypeptidase N, polypeptide 2	NM_027904|Cpn2|71756|carboxypeptidase N, polypeptide 2
mm9_v1_chr5_-_42099382_42099426	0.0106792	FOXD3.p2	AK159493|Rab28|100972|RAB28, member RAS oncogene family	BC004580|Rab28|100972|RAB28, member RAS oncogene family	NM_027295|Rab28|100972|RAB28, member RAS oncogene family	AK012286|Rab28|100972|RAB28, member RAS oncogene family
mm9_v1_chr6_-_71858736_71858760	0.0106629	FOXD3.p2	AK032831|Ptcd3|69956|pentatricopeptide repeat domain 3	AK011665|Ptcd3|69956|pentatricopeptide repeat domain 3	AK146005|Ptcd3|69956|pentatricopeptide repeat domain 3	AK172480|Ptcd3|69956|pentatricopeptide repeat domain 3	BC115434|Ptcd3|69956|pentatricopeptide repeat domain 3	AK146172|Ptcd3|69956|pentatricopeptide repeat domain 3	NM_027275|Ptcd3|69956|pentatricopeptide repeat domain 3
mm9_v1_chr9_-_103965405_103965479	0.010608	FOXD3.p2	AK151823|Uba5|66663|ubiquitin-like modifier activating enzyme 5	AK077825|Uba5|66663|ubiquitin-like modifier activating enzyme 5	AK168907|Uba5|66663|ubiquitin-like modifier activating enzyme 5	AK152029|Uba5|66663|ubiquitin-like modifier activating enzyme 5	AK017787|Uba5|66663|ubiquitin-like modifier activating enzyme 5	NM_025692|Uba5|66663|ubiquitin-like modifier activating enzyme 5
mm9_v1_chr13_+_94077988_94077988	0.0105921	FOXD3.p2	AY137385|Homer1|26556|homer homolog 1 (Drosophila)	NM_152134|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr16_+_23520391_23520449	0.0105742	FOXD3.p2	
mm9_v1_chr3_+_102877936_102877949	0.0105624	FOXD3.p2	NM_001033303|Ampd1|229665|adenosine monophosphate deaminase 1	AK137549|Ampd1|229665|adenosine monophosphate deaminase 1	AK132524|Ampd1|229665|adenosine monophosphate deaminase 1
mm9_v1_chr12_-_15823536_15823550	0.0105035	FOXD3.p2	BC037387|Trib2|217410|tribbles homolog 2 (Drosophila)	AK044747|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr8_+_73282270_73282383	0.010475	FOXD3.p2	
mm9_v1_chr5_-_38952777_38952930	0.0104613	FOXD3.p2	BC119358|Wdr1|22388|WD repeat domain 1	BC125295|Wdr1|22388|WD repeat domain 1	AK165225|Wdr1|22388|WD repeat domain 1	AK165323|Wdr1|22388|WD repeat domain 1	AK167813|Wdr1|22388|WD repeat domain 1	AK151146|Wdr1|22388|WD repeat domain 1	AF020055|Wdr1|22388|WD repeat domain 1	NM_011715|Wdr1|22388|WD repeat domain 1	AK153338|Wdr1|22388|WD repeat domain 1	AK170379|Wdr1|22388|WD repeat domain 1	AK167241|Wdr1|22388|WD repeat domain 1	AK169893|Wdr1|22388|WD repeat domain 1	AK156300|Wdr1|22388|WD repeat domain 1	AK167275|Wdr1|22388|WD repeat domain 1	AK004858|Wdr1|22388|WD repeat domain 1	AK169835|Wdr1|22388|WD repeat domain 1	BC049117|Wdr1|22388|WD repeat domain 1
mm9_v1_chr3_+_95238342_95238357	0.0104538	FOXD3.p2	BC012870|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK145415|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr10_-_60895686_60895691	0.0104322	FOXD3.p2	AK147814|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr15_+_51871652_51871713	0.0103676	FOXD3.p2	AK046414|Aard|239435|alanine and arginine rich domain containing protein	NM_175503|Aard|239435|alanine and arginine rich domain containing protein	BC089505|Aard|239435|alanine and arginine rich domain containing protein	AY134665|Aard|239435|alanine and arginine rich domain containing protein
mm9_v1_chr10_-_60895433_60895442	0.0103642	FOXD3.p2	AK216330|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr5_+_22988226_22988243	0.0102859	FOXD3.p2	
mm9_v1_chr1_+_95395940_95395952	0.0102522	FOXD3.p2	AK196297|Sept2|18000|septin 2	AK216929|Sept2|18000|septin 2
mm9_v1_chr8_+_87560809_87560830	0.0101347	FOXD3.p2	AK154985|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	AK155760|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	NM_145390|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr4_+_146781359_146781362	0.010116	FOXD3.p2	
mm9_v1_chr5_-_130500116_130500235	0.0101004	FOXD3.p2	AK148764|Asl|109900|argininosuccinate lyase	AK168739|Asl|109900|argininosuccinate lyase	AK138423|Asl|109900|argininosuccinate lyase	BC016670|Asl|109900|argininosuccinate lyase	NM_133768|Asl|109900|argininosuccinate lyase	AK010922|Asl|109900|argininosuccinate lyase	AK076453|Asl|109900|argininosuccinate lyase	AK140160|Asl|109900|argininosuccinate lyase
mm9_v1_chr11_-_116167956_116168087	0.0100035	FOXD3.p2	AF014461|Exoc7|53413|exocyst complex component 7	AK140450|Exoc7|53413|exocyst complex component 7	BC053710|Exoc7|53413|exocyst complex component 7	BC028927|Exoc7|53413|exocyst complex component 7	AK167769|Exoc7|53413|exocyst complex component 7	AK162868|Exoc7|53413|exocyst complex component 7	AK169928|Exoc7|53413|exocyst complex component 7	AK087601|Exoc7|53413|exocyst complex component 7	NM_001162872|Exoc7|53413|exocyst complex component 7	NM_016857|Exoc7|53413|exocyst complex component 7
mm9_v1_chr16_-_56029770_56029852	0.00997561	FOXD3.p2	AK150595|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK145195|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK152279|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC106192|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC061235|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK159201|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC023320|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK168723|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK166071|Pcnp|76302|PEST proteolytic signal containing nuclear protein	NM_001024622|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC132588|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC132590|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC145194|Pcnp|76302|PEST proteolytic signal containing nuclear protein
mm9_v1_chr1_-_74982118_74982188	0.00994963	FOXD3.p2	BC150939|Ccdc108|241116|coiled-coil domain containing 108	AK038623|Ccdc108|241116|coiled-coil domain containing 108	AK046272|Ccdc108|241116|coiled-coil domain containing 108	AK133278|Ccdc108|241116|coiled-coil domain containing 108	NM_001039495|Ccdc108|241116|coiled-coil domain containing 108
mm9_v1_chr9_-_55994906_55994921	0.00994211	FOXD3.p2	AK207599|Tspan3|56434|tetraspanin 3	AK178223|Tspan3|56434|tetraspanin 3	AK180027|Tspan3|56434|tetraspanin 3	AK182665|Tspan3|56434|tetraspanin 3	AK188385|Tspan3|56434|tetraspanin 3	AK220124|Tspan3|56434|tetraspanin 3
mm9_v1_chr17_-_23814399_23814413	0.00991083	FOXD3.p2	BC025860|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AF156164|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005382|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005530|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr3_+_157197301_157197382	0.0098551	FOXD3.p2	AK150291|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK152536|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168613|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167983|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167766|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC049115|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168162|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169335|Zranb2|53861|zinc finger, RAN-binding domain containing 2	NM_017381|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146275|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK160862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167756|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168033|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC132547|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC138575|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK166534|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169114|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146854|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AF133818|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr13_+_36209279_36209279	0.00983975	FOXD3.p2	NM_001039189|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	NM_024274|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr19_+_23241546_23241602	0.00981798	FOXD3.p2	AK009928|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr7_-_135039020_135039157	0.00981278	FOXD3.p2	AK008509|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK008578|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK002742|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	BC031732|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK013996|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK003237|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	NM_178600|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1
mm9_v1_chr15_-_36538484_36538485	0.00976629	FOXD3.p2	BC011207|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr11_-_88579487_88579510	0.00974997	FOXD3.p2	BC109368|LOC100504473|100504473|RNA-binding protein Musashi homolog 2-like	BC111809|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr8_-_18741546_18741552	0.00970692	FOXD3.p2	AK143974|Angpt2|11601|angiopoietin 2	AK019860|Angpt2|11601|angiopoietin 2	NM_007426|Angpt2|11601|angiopoietin 2
mm9_v1_chr2_+_163842411_163842512	0.00968699	FOXD3.p2	AK199528|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr18_-_66129715_66129836	0.00962331	FOXD3.p2	AY264291|Cplx4|225644|complexin 4	BC016082|Cplx4|225644|complexin 4	NM_145493|Cplx4|225644|complexin 4	AK044262|Cplx4|225644|complexin 4
mm9_v1_chr17_+_66460934_66461036	0.00958041	FOXD3.p2	AK159820|ORF19|68767|open reading frame 19	AK171737|ORF19|68767|open reading frame 19	AK172673|ORF19|68767|open reading frame 19	AJ304796|ORF19|68767|open reading frame 19	AK149967|ORF19|68767|open reading frame 19	BC025839|ORF19|68767|open reading frame 19	NM_001037757|ORF19|68767|open reading frame 19	AK154400|ORF19|68767|open reading frame 19	AK033616|ORF19|68767|open reading frame 19
mm9_v1_chr9_+_57369044_57369118	0.0094828	FOXD3.p2	BC003831|Cox5a|12858|cytochrome c oxidase, subunit Va	BC034302|Cox5a|12858|cytochrome c oxidase, subunit Va	AK018723|Cox5a|12858|cytochrome c oxidase, subunit Va	X15963|Cox5a|12858|cytochrome c oxidase, subunit Va
mm9_v1_chr4_-_134909036_134909128	0.00947435	FOXD3.p2	BC094322|Srrm1|51796|serine/arginine repetitive matrix 1	BC079542|Srrm1|51796|serine/arginine repetitive matrix 1	AF062655|Srrm1|51796|serine/arginine repetitive matrix 1	AK008284|Srrm1|51796|serine/arginine repetitive matrix 1	AK028412|Srrm1|51796|serine/arginine repetitive matrix 1	NM_001130477|Srrm1|51796|serine/arginine repetitive matrix 1	NM_016799|Srrm1|51796|serine/arginine repetitive matrix 1
mm9_v1_chr9_+_110255447_110255486	0.00947375	FOXD3.p2	
mm9_v1_chr1_+_57028300_57028346	0.00944924	FOXD3.p2	AK046727|9130024F11Rik|329160|RIKEN cDNA 9130024F11 gene
mm9_v1_chr3_+_137940608_137940618	0.00936741	FOXD3.p2	AK146094|Adh1|11522|alcohol dehydrogenase 1 (class I)	BC013477|Adh1|11522|alcohol dehydrogenase 1 (class I)	NM_007409|Adh1|11522|alcohol dehydrogenase 1 (class I)
mm9_v1_chr15_+_75692745_75692830	0.00934591	FOXD3.p2	AK088747|Gsdmd|69146|gasdermin D	AK171294|Gsdmd|69146|gasdermin D	AK007710|Gsdmd|69146|gasdermin D	AK165858|Gsdmd|69146|gasdermin D	NM_026960|Gsdmd|69146|gasdermin D	BC029813|Gsdmd|69146|gasdermin D
mm9_v1_chr12_-_104681842_104681891	0.00926413	FOXD3.p2	AY090098|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK040279|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK160503|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC086889|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC100588|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	NM_029803|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A
mm9_v1_chr9_-_113562893_113563007	0.00925643	FOXD3.p2	AK035750|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK086540|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK157704|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr2_-_148700920_148700989	0.00924042	FOXD3.p2	AK212642|Cst3|13010|cystatin C
mm9_v1_chr5_+_140797575_140797589	0.00913905	FOXD3.p2	
mm9_v1_chr6_-_122692754_122692762	0.0090188	FOXD3.p2	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr6_-_23600205_23600304	0.00896875	FOXD3.p2	BC116423|Rnf133|386611|ring finger protein 133	BC116424|Rnf133|386611|ring finger protein 133	AK028082|Rnf133|386611|ring finger protein 133	NM_198251|Rnf133|386611|ring finger protein 133
mm9_v1_chr11_-_69480763_69480942	0.00894461	FOXD3.p2	
mm9_v1_chr7_-_48754777_48754790	0.00890552	FOXD3.p2	BC089503|AW146154|101835|expressed sequence AW146154
mm9_v1_chr4_-_148500769_148500849	0.00888535	FOXD3.p2	AF013253|Cort|12854|cortistatin	AK013496|Cort|12854|cortistatin	NM_007745|Cort|12854|cortistatin
mm9_v1_chr15_-_83207509_83207618	0.00884778	FOXD3.p2	
mm9_v1_chr4_+_8462805_8462808	0.00871786	FOXD3.p2	AK135421|Rab2a|59021|RAB2A, member RAS oncogene family	AK163320|Rab2a|59021|RAB2A, member RAS oncogene family	AK146179|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr16_+_49868005_49868080	0.00869706	FOXD3.p2	BC009094|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr19_-_44629894_44629934	0.00857716	FOXD3.p2	AK010177|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	AK013516|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	BC043019|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	NM_026061|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	AK028070|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8
mm9_v1_chr8_-_108375786_108375962	0.00856283	FOXD3.p2	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr5_+_13399301_13399308	0.00853611	FOXD3.p2	D85028|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	NM_009152|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr7_+_134985164_134985421	0.00845435	FOXD3.p2	AK145909|Stx4a|20909|syntaxin 4A (placental)	BC011491|Stx4a|20909|syntaxin 4A (placental)	NM_009294|Stx4a|20909|syntaxin 4A (placental)	AK161971|Stx4a|20909|syntaxin 4A (placental)	BC052023|Stx4a|20909|syntaxin 4A (placental)
mm9_v1_chr8_+_123640069_123640092	0.00840227	FOXD3.p2	AK076319|Foxc2|14234|forkhead box C2	AK146887|Foxc2|14234|forkhead box C2	NM_013519|Foxc2|14234|forkhead box C2	X74040|Foxc2|14234|forkhead box C2
mm9_v1_chr15_-_97738692_97738754	0.00834967	FOXD3.p2	BC006716|Vdr|22337|vitamin D receptor	D31969|Vdr|22337|vitamin D receptor	AK154647|Vdr|22337|vitamin D receptor	AK030339|Vdr|22337|vitamin D receptor	NM_009504|Vdr|22337|vitamin D receptor	AK156789|Vdr|22337|vitamin D receptor
mm9_v1_chr12_+_118997623_118997625	0.00833897	FOXD3.p2	AK134824|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr11_+_70246079_70246238	0.0081763	FOXD3.p2	AK150389|Arrb2|216869|arrestin, beta 2	AK170647|Arrb2|216869|arrestin, beta 2	AK089542|Arrb2|216869|arrestin, beta 2	AK162889|Arrb2|216869|arrestin, beta 2	AK159317|Arrb2|216869|arrestin, beta 2	NM_145429|Arrb2|216869|arrestin, beta 2	AK154874|Arrb2|216869|arrestin, beta 2	AK170889|Arrb2|216869|arrestin, beta 2	BC016642|Arrb2|216869|arrestin, beta 2
mm9_v1_chr4_-_128866660_128866738	0.00816763	FOXD3.p2	AK015229|S100pbp|74648|S100P binding protein	NM_029036|S100pbp|74648|S100P binding protein
mm9_v1_chr1_-_89905074_89905142	0.00813044	FOXD3.p2	BC030843|Usp40|227334|ubiquitin specific peptidase 40	AK166303|Usp40|227334|ubiquitin specific peptidase 40	BC117957|Usp40|227334|ubiquitin specific peptidase 40	BC117958|Usp40|227334|ubiquitin specific peptidase 40	AK050239|Usp40|227334|ubiquitin specific peptidase 40	AK045613|Usp40|227334|ubiquitin specific peptidase 40	AK132295|Usp40|227334|ubiquitin specific peptidase 40	NM_001033291|Usp40|227334|ubiquitin specific peptidase 40	NM_001198573|Usp40|227334|ubiquitin specific peptidase 40
mm9_v1_chr10_-_93352428_93352466	0.00810088	FOXD3.p2	AB003144|Metap2|56307|methionine aminopeptidase 2	AK090323|Metap2|56307|methionine aminopeptidase 2	AK076804|Metap2|56307|methionine aminopeptidase 2
mm9_v1_chr2_-_180976663_180976720	0.0080745	FOXD3.p2	AK172227|BC006779|229003|cDNA sequence BC006779
mm9_v1_chr16_-_65105465_65105679	0.0080597	FOXD3.p2	BC120507|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	BC137604|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	NM_008310|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	Z14224|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	AK045364|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F
mm9_v1_chrX_+_53985133_53985235	0.00804239	FOXD3.p2	NM_001077361|Fhl1|14199|four and a half LIM domains 1	AK158966|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr17_+_35259896_35259930	0.00804147	FOXD3.p2	BC120637|Gpank1|81845|G patch domain and ankyrin repeats 1	BC120639|Gpank1|81845|G patch domain and ankyrin repeats 1	NM_032460|Gpank1|81845|G patch domain and ankyrin repeats 1	AB221568|Gpank1|81845|G patch domain and ankyrin repeats 1
mm9_v1_chr11_+_69812965_69813148	0.00802902	FOXD3.p2	Y17676|Phf23|78246|PHD finger protein 23
mm9_v1_chr18_+_20823750_20823857	0.00802574	FOXD3.p2	NM_013697|Ttr|22139|transthyretin	BC024702|Ttr|22139|transthyretin
mm9_v1_chr2_+_38441497_38441644	0.00796189	FOXD3.p2	AK214670|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK208733|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr3_-_88100759_88100800	0.00795431	FOXD3.p2	AK006195|1700021C14Rik|76927|RIKEN cDNA 1700021C14 gene	NM_029801|1700021C14Rik|76927|RIKEN cDNA 1700021C14 gene	BC107298|1700021C14Rik|76927|RIKEN cDNA 1700021C14 gene
mm9_v1_chr11_-_40568710_40568789	0.00794707	FOXD3.p2	AK167486|Ccng1|12450|cyclin G1	AK159429|Ccng1|12450|cyclin G1	AK153392|Ccng1|12450|cyclin G1	AK167052|Ccng1|12450|cyclin G1	AK159831|Ccng1|12450|cyclin G1	L49507|Ccng1|12450|cyclin G1	Z37110|Ccng1|12450|cyclin G1	AK160411|Ccng1|12450|cyclin G1	AK128957|Ccng1|12450|cyclin G1	AK147026|Ccng1|12450|cyclin G1	AK170397|Ccng1|12450|cyclin G1	AK143114|Ccng1|12450|cyclin G1	NM_009831|Ccng1|12450|cyclin G1
mm9_v1_chr14_-_20902310_20902393	0.00785436	FOXD3.p2	BC027644|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK031748|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK007941|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK015650|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	NM_026209|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene
mm9_v1_chr2_-_152169650_152169795	0.00781719	FOXD3.p2	AK146421|Trib3|228775|tribbles homolog 3 (Drosophila)	AK089931|Trib3|228775|tribbles homolog 3 (Drosophila)	AK144752|Trib3|228775|tribbles homolog 3 (Drosophila)	AJ514260|Trib3|228775|tribbles homolog 3 (Drosophila)	AK146340|Trib3|228775|tribbles homolog 3 (Drosophila)	AK132257|Trib3|228775|tribbles homolog 3 (Drosophila)	AK159760|Trib3|228775|tribbles homolog 3 (Drosophila)	AF358868|Trib3|228775|tribbles homolog 3 (Drosophila)	BC012955|Trib3|228775|tribbles homolog 3 (Drosophila)	AK160099|Trib3|228775|tribbles homolog 3 (Drosophila)	NM_175093|Trib3|228775|tribbles homolog 3 (Drosophila)
mm9_v1_chr17_-_41017500_41017509	0.00779779	FOXD3.p2	AK033670|9130008F23Rik|71583|RIKEN cDNA 9130008F23 gene	BC132063|9130008F23Rik|71583|RIKEN cDNA 9130008F23 gene	BC132065|9130008F23Rik|71583|RIKEN cDNA 9130008F23 gene	AK018601|9130008F23Rik|71583|RIKEN cDNA 9130008F23 gene	NM_027834|9130008F23Rik|71583|RIKEN cDNA 9130008F23 gene
mm9_v1_chr11_+_69729143_69729209	0.0077742	FOXD3.p2	AK185728|Gps2|56310|G protein pathway suppressor 2
mm9_v1_chr12_-_91976586_91976877	0.00776402	FOXD3.p2	AK032038|Dio2|13371|deiodinase, iodothyronine, type II	AK045607|Dio2|13371|deiodinase, iodothyronine, type II	AF177196|Dio2|13371|deiodinase, iodothyronine, type II	AF177197|Dio2|13371|deiodinase, iodothyronine, type II	AF093137|Dio2|13371|deiodinase, iodothyronine, type II	BC125383|Dio2|13371|deiodinase, iodothyronine, type II	BC125385|Dio2|13371|deiodinase, iodothyronine, type II	AF096875|Dio2|13371|deiodinase, iodothyronine, type II	NM_010050|Dio2|13371|deiodinase, iodothyronine, type II
mm9_v1_chr11_-_106646516_106646611	0.00772017	FOXD3.p2	AK219348|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr4_-_4065927_4065977	0.00769782	FOXD3.p2	AK047709|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1	AK161272|Penk|18619|preproenkephalin	AK135111|Penk|18619|preproenkephalin
mm9_v1_chr14_+_55045740_55045780	0.00764836	FOXD3.p2	AK004194|Mrpl52|68836|mitochondrial ribosomal protein L52	NM_026851|Mrpl52|68836|mitochondrial ribosomal protein L52	AK150806|Mrpl52|68836|mitochondrial ribosomal protein L52	AK151615|Mrpl52|68836|mitochondrial ribosomal protein L52	AK164629|Mrpl52|68836|mitochondrial ribosomal protein L52	AK081551|Mrpl52|68836|mitochondrial ribosomal protein L52	BC028522|Mrpl52|68836|mitochondrial ribosomal protein L52	AK152876|Mrpl52|68836|mitochondrial ribosomal protein L52
mm9_v1_chr4_-_4065205_4065229	0.00759368	FOXD3.p2	M13227|Penk|18619|preproenkephalin
mm9_v1_chr7_+_73254341_73254400	0.00758114	FOXD3.p2	AK129255|Chsy1|269941|chondroitin sulfate synthase 1	BC128567|Chsy1|269941|chondroitin sulfate synthase 1	BC153826|Chsy1|269941|chondroitin sulfate synthase 1	BC153827|Chsy1|269941|chondroitin sulfate synthase 1	NM_001081163|Chsy1|269941|chondroitin sulfate synthase 1
mm9_v1_chr6_+_71859046_71859156	0.00757664	FOXD3.p2	AK031689|Polr1a|20019|polymerase (RNA) I polypeptide A	AK160970|Polr1a|20019|polymerase (RNA) I polypeptide A	NM_009088|Polr1a|20019|polymerase (RNA) I polypeptide A	AK147379|Polr1a|20019|polymerase (RNA) I polypeptide A	AK160785|Polr1a|20019|polymerase (RNA) I polypeptide A	BC034785|Polr1a|20019|polymerase (RNA) I polypeptide A	AK045809|Polr1a|20019|polymerase (RNA) I polypeptide A	AK082883|Polr1a|20019|polymerase (RNA) I polypeptide A	BC053744|Polr1a|20019|polymerase (RNA) I polypeptide A	BC010254|Polr1a|20019|polymerase (RNA) I polypeptide A	BC049190|Polr1a|20019|polymerase (RNA) I polypeptide A	AF000938|Polr1a|20019|polymerase (RNA) I polypeptide A
mm9_v1_chr17_+_26389850_26389887	0.00752573	FOXD3.p2	AK160293|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	NM_025881|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	NM_028190|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr12_-_13227172_13227259	0.00751634	FOXD3.p2	
mm9_v1_chr5_+_118426721_118426771	0.00749289	FOXD3.p2	BC021871|Fbxo21|231670|F-box protein 21
mm9_v1_chr19_-_36763823_36763968	0.00747951	FOXD3.p2	AK142254|1500017E21Rik|668215|RIKEN cDNA 1500017E21 gene
mm9_v1_chr2_+_33097791_33097802	0.00743622	FOXD3.p2	AK187902|Angptl2|26360|angiopoietin-like 2	AK205240|Angptl2|26360|angiopoietin-like 2	AK214337|Angptl2|26360|angiopoietin-like 2
mm9_v1_chr5_-_122286849_122286903	0.00741159	FOXD3.p2	AK028796|Sh2b3|16923|SH2B adaptor protein 3
mm9_v1_chr10_+_68186493_68186584	0.00740392	FOXD3.p2	AK028283|Tmem26|327766|transmembrane protein 26	NM_177794|Tmem26|327766|transmembrane protein 26	AK084351|Tmem26|327766|transmembrane protein 26	AK143866|Tmem26|327766|transmembrane protein 26	BC117502|Tmem26|327766|transmembrane protein 26	BC117503|Tmem26|327766|transmembrane protein 26
mm9_v1_chr3_-_108236057_108236062	0.00737974	FOXD3.p2	AK181805|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK190309|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK217331|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK219731|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr10_-_80363493_80363567	0.00737921	FOXD3.p2	AK009041|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK013230|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK003054|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK009152|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK088984|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	BC011436|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr18_+_75160121_75160211	0.00736497	FOXD3.p2	NM_001002239|Rpl17|319195|ribosomal protein L17	BC091759|Rpl17|319195|ribosomal protein L17	AK088443|Rpl17|319195|ribosomal protein L17	AK002770|Rpl17|319195|ribosomal protein L17	AK011132|Rpl17|319195|ribosomal protein L17	AK011133|Rpl17|319195|ribosomal protein L17	AK137077|Rpl17|319195|ribosomal protein L17	BC090990|Rpl17|319195|ribosomal protein L17
mm9_v1_chr6_+_42195911_42195967	0.00734064	FOXD3.p2	NM_029555|Gstk1|76263|glutathione S-transferase kappa 1	AK002661|Gstk1|76263|glutathione S-transferase kappa 1
mm9_v1_chr3_+_152377069_152377069	0.00731746	FOXD3.p2	AK013853|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K	AK160801|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K
mm9_v1_chr18_-_73914084_73914137	0.00731653	FOXD3.p2	BC019371|Elac1|114615|elaC homolog 1 (E. coli)	AF308697|Elac1|114615|elaC homolog 1 (E. coli)	NM_053255|Elac1|114615|elaC homolog 1 (E. coli)
mm9_v1_chr13_-_58227306_58227430	0.00729891	FOXD3.p2	BC048746|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr16_-_23988680_23988725	0.00724379	FOXD3.p2	D38377|Bcl6|12053|B-cell leukemia/lymphoma 6	BC052315|Bcl6|12053|B-cell leukemia/lymphoma 6	NM_009744|Bcl6|12053|B-cell leukemia/lymphoma 6	AK039228|Bcl6|12053|B-cell leukemia/lymphoma 6	AK036975|Bcl6|12053|B-cell leukemia/lymphoma 6	AK151229|Bcl6|12053|B-cell leukemia/lymphoma 6
mm9_v1_chr4_-_102786828_102786903	0.00720807	FOXD3.p2	BC028975|Wdr78|242584|WD repeat domain 78	AK087151|E030030F06Rik|320382|RIKEN cDNA E030030F06 gene	NM_146254|Wdr78|242584|WD repeat domain 78
mm9_v1_chrX_-_71526939_71526996	0.00718926	FOXD3.p2	DQ116784|Dnase1l1|69537|deoxyribonuclease 1-like 1	AK150242|Dnase1l1|69537|deoxyribonuclease 1-like 1
mm9_v1_chr7_+_130267661_130267769	0.00711499	FOXD3.p2	AK147327|Tnrc6a|233833|trinucleotide repeat containing 6a	AK008599|Tnrc6a|233833|trinucleotide repeat containing 6a	BC026849|Tnrc6a|233833|trinucleotide repeat containing 6a	AK083848|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr1_+_181476534_181476659	0.00706839	FOXD3.p2	AK146681|Cnst|226744|consortin, connexin sorting protein	AK089290|Cnst|226744|consortin, connexin sorting protein	AK036332|Cnst|226744|consortin, connexin sorting protein	AK040899|Cnst|226744|consortin, connexin sorting protein	AK040666|Cnst|226744|consortin, connexin sorting protein	AK087361|Cnst|226744|consortin, connexin sorting protein	BC054802|Cnst|226744|consortin, connexin sorting protein	NM_146105|Cnst|226744|consortin, connexin sorting protein
mm9_v1_chr5_+_122804377_122804463	0.00697722	FOXD3.p2	AK150330|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AK008248|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AK004103|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AF193794|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	NM_019780|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	BC005663|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AK036426|Vps29|56433|vacuolar protein sorting 29 (S. pombe)
mm9_v1_chr10_-_89195016_89195045	0.00694286	FOXD3.p2	BC062137|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)	AK088571|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)	AK008409|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)	NM_025914|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)
mm9_v1_chr11_+_11586273_11586432	0.00693938	FOXD3.p2	BC138789|Ikzf1|22778|IKAROS family zinc finger 1
mm9_v1_chr8_+_56040080_56040120	0.00693292	FOXD3.p2	NM_153581|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr8_-_73121418_73121547	0.00692494	FOXD3.p2	
mm9_v1_chr4_+_134481298_134481299	0.00690904	FOXD3.p2	
mm9_v1_chr8_+_23303277_23303337	0.00687725	FOXD3.p2	AK161865|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK008946|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK150754|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK151035|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK156241|Vps36|70160|vacuolar protein sorting 36 (yeast)	BC010811|Vps36|70160|vacuolar protein sorting 36 (yeast)	NM_027338|Vps36|70160|vacuolar protein sorting 36 (yeast)
mm9_v1_chr12_-_32319353_32319551	0.00686458	FOXD3.p2	BC003303|Bcap29|12033|B-cell receptor-associated protein 29	BC021661|Bcap29|12033|B-cell receptor-associated protein 29	NM_007530|Bcap29|12033|B-cell receptor-associated protein 29	AK090068|Bcap29|12033|B-cell receptor-associated protein 29	AK144754|Bcap29|12033|B-cell receptor-associated protein 29	NM_001164090|Bcap29|12033|B-cell receptor-associated protein 29
mm9_v1_chr18_+_74938827_74938895	0.00685325	FOXD3.p2	AK146007|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK050101|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK167567|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK169359|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	NM_177470|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK167715|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK002555|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	BC028901|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)
mm9_v1_chr15_-_77136972_77136997	0.00679367	FOXD3.p2	AY904025|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr3_+_152377050_152377068	0.00674167	FOXD3.p2	AK077893|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K	NM_025662|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K	NM_178016|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K
mm9_v1_chr2_+_167340686_167340879	0.00673761	FOXD3.p2	BC019989|Rnf114|81018|ring finger protein 114	AK216194|Rnf114|81018|ring finger protein 114	AK003584|Rnf114|81018|ring finger protein 114
mm9_v1_chr4_+_33295965_33295965	0.00673551	FOXD3.p2	AK046869|Srsf13b|272009|serine/arginine-rich splicing factor 13B	NM_177774|Srsf13b|272009|serine/arginine-rich splicing factor 13B
mm9_v1_chr5_-_115119973_115120071	0.00672533	FOXD3.p2	AK189496|Gltp|56356|glycolipid transfer protein
mm9_v1_chr6_-_131197295_131197381	0.00667043	FOXD3.p2	U10304|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	AK017140|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	BC064711|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_001170851|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_008462|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2
mm9_v1_chr11_-_68635236_68635451	0.00662602	FOXD3.p2	AK194070|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr7_+_53693190_53693196	0.00659243	FOXD3.p2	AK079373|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr11_+_43247235_43247249	0.00656621	FOXD3.p2	AK047597|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr9_+_80012837_80012863	0.00652836	FOXD3.p2	NM_001039546|Myo6|17920|myosin VI	AK053882|Myo6|17920|myosin VI
mm9_v1_chr16_-_20716002_20716191	0.00647536	FOXD3.p2	AK155104|Clcn2|12724|chloride channel 2	AK171231|Clcn2|12724|chloride channel 2	BC120699|Clcn2|12724|chloride channel 2	BC137625|Clcn2|12724|chloride channel 2	AF139724|Clcn2|12724|chloride channel 2	AF097415|Clcn2|12724|chloride channel 2	AK172148|Clcn2|12724|chloride channel 2
mm9_v1_chr14_-_37935305_37935311	0.00646626	FOXD3.p2	
mm9_v1_chr9_+_113885162_113885169	0.00642588	FOXD3.p2	AK087783|Ubp1|22221|upstream binding protein 1
mm9_v1_chr2_-_124949149_124949396	0.00641538	FOXD3.p2	BC060946|Myef2|17876|myelin basic protein expression factor 2, repressor	AK129336|Myef2|17876|myelin basic protein expression factor 2, repressor	AK142363|Myef2|17876|myelin basic protein expression factor 2, repressor	AK143230|Myef2|17876|myelin basic protein expression factor 2, repressor	AK048404|Myef2|17876|myelin basic protein expression factor 2, repressor	NM_001162417|Myef2|17876|myelin basic protein expression factor 2, repressor	NM_001162418|Myef2|17876|myelin basic protein expression factor 2, repressor	NM_010852|Myef2|17876|myelin basic protein expression factor 2, repressor	AK012133|Myef2|17876|myelin basic protein expression factor 2, repressor
mm9_v1_chr19_-_23727286_23727303	0.00638859	FOXD3.p2	BC049563|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene	AK006473|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene	NM_026188|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene	AK014972|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene
mm9_v1_chr2_-_106814482_106814618	0.00634582	FOXD3.p2	BC054106|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK038273|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK134965|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK165082|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK012215|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	NM_001025102|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene
mm9_v1_chr2_+_30812810_30812845	0.00626611	FOXD3.p2	AK011416|Tor1b|30934|torsin family 1, member B
mm9_v1_chr7_+_73194834_73194897	0.00617706	FOXD3.p2	AF008223|Pcsk6|18553|proprotein convertase subtilisin/kexin type 6
mm9_v1_chr17_-_35263237_35263384	0.00616255	FOXD3.p2	AK009290|Gpank1|81845|G patch domain and ankyrin repeats 1
mm9_v1_chr5_+_118426792_118426794	0.00612625	FOXD3.p2	AB093270|Fbxo21|231670|F-box protein 21
mm9_v1_chr4_+_148478238_148478288	0.00608636	FOXD3.p2	AK039227|Dffa|13347|DNA fragmentation factor, alpha subunit	NM_001025296|Dffa|13347|DNA fragmentation factor, alpha subunit	NM_010044|Dffa|13347|DNA fragmentation factor, alpha subunit	AK154488|Dffa|13347|DNA fragmentation factor, alpha subunit
mm9_v1_chr14_+_121325421_121325483	0.00606538	FOXD3.p2	BC020012|Ipo5|70572|importin 5
mm9_v1_chr10_+_86148239_86148360	0.00606395	FOXD3.p2	AK019015|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK007490|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK017634|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK012122|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK090016|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene
mm9_v1_chr2_+_109532592_109532697	0.0059935	FOXD3.p2	AY057913|Bdnf|12064|brain derived neurotrophic factor	EF125673|Bdnf|12064|brain derived neurotrophic factor	NM_001048141|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr2_+_130493536_130493589	0.00596746	FOXD3.p2	AK153806|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)	AK138101|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)	AK008279|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)	AK153904|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)	AB100501|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)	AK009248|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)	BC026508|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)	NM_025922|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)	AK139770|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)	BC094466|Itpa|16434|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
mm9_v1_chr13_+_67274117_67274142	0.00592409	FOXD3.p2	NM_001013769|Rsl1|380855|regulator of sex limited protein 1	AK164698|Rsl1|380855|regulator of sex limited protein 1	BC103788|Rsl1|380855|regulator of sex limited protein 1
mm9_v1_chr2_-_87814819_87814819	0.00588254	FOXD3.p2	AB061229|Olfr74|117005|olfactory receptor 74	NM_054091|Olfr74|117005|olfactory receptor 74
mm9_v1_chr13_-_30637108_30637234	0.00583468	FOXD3.p2	AK012180|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK003966|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK153139|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	NM_025710|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK014470|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	BC019934|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	BC047125|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK152391|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
mm9_v1_chr17_+_25359526_25359671	0.00581748	FOXD3.p2	AK004898|Unkl|74154|unkempt-like (Drosophila)	NM_028789|Unkl|74154|unkempt-like (Drosophila)	BC150842|Unkl|74154|unkempt-like (Drosophila)
mm9_v1_chr14_+_55308846_55308961	0.00577547	FOXD3.p2	
mm9_v1_chr10_+_127669154_127669189	0.00570717	FOXD3.p2	BC058641|Timeless|21853|timeless homolog (Drosophila)	BC082770|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr7_+_31017092_31017092	0.0057039	FOXD3.p2	BC062812|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I	NM_027259|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I
mm9_v1_chr15_+_101925801_101925989	0.0056097	FOXD3.p2	AK217495|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr2_+_88798624_88798624	0.00557853	FOXD3.p2	NM_207140|Olfr1212|258241|olfactory receptor 1212
mm9_v1_chr2_-_9981155_9981246	0.00554838	FOXD3.p2	AK187037|Atp5c1|11949|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
mm9_v1_chr8_+_88016492_88016583	0.00546052	FOXD3.p2	AK075894|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	AK076250|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	AK031958|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	AK033424|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	NM_173866|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2
mm9_v1_chr1_-_121809744_121809749	0.00542278	FOXD3.p2	BC094344|Tmem177|66343|transmembrane protein 177	NM_175106|Tmem177|66343|transmembrane protein 177	AK009043|Tmem177|66343|transmembrane protein 177	AK076108|Tmem177|66343|transmembrane protein 177
mm9_v1_chr4_-_128866766_128866902	0.00538924	FOXD3.p2	AK146310|S100pbp|74648|S100P binding protein	AK030636|S100pbp|74648|S100P binding protein	AK046756|S100pbp|74648|S100P binding protein	AK154074|S100pbp|74648|S100P binding protein	AK169364|S100pbp|74648|S100P binding protein	AK139097|S100pbp|74648|S100P binding protein	BC038329|S100pbp|74648|S100P binding protein
mm9_v1_chr12_-_85741801_85741813	0.00535861	FOXD3.p2	AK079267|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK002618|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr6_-_85854877_85854931	0.00528569	FOXD3.p2	BC029200|1700019G17Rik|75541|RIKEN cDNA 1700019G17 gene	NM_029331|1700019G17Rik|75541|RIKEN cDNA 1700019G17 gene
mm9_v1_chr3_+_90017618_90017636	0.00528102	FOXD3.p2	AK083292|Rab13|68328|RAB13, member RAS oncogene family	AK080805|Rab13|68328|RAB13, member RAS oncogene family
mm9_v1_chr6_+_29417738_29417806	0.00524865	FOXD3.p2	AK152929|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK007327|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	NM_025381|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK003419|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK152153|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK152959|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F
mm9_v1_chr1_+_174249713_174249834	0.00523284	FOXD3.p2	
mm9_v1_chr7_-_30638635_30638689	0.00522189	FOXD3.p2	AK132317|Zfp940|233057|zinc finger protein 940	AK139326|Zfp940|233057|zinc finger protein 940	BC027344|Zfp940|233057|zinc finger protein 940	NM_173738|Zfp940|233057|zinc finger protein 940	AK137204|Zfp940|233057|zinc finger protein 940	AK141787|Zfp940|233057|zinc finger protein 940
mm9_v1_chr6_-_30341017_30341032	0.00506629	FOXD3.p2	AK168071|Zc3hc1|232679|zinc finger, C3HC type 1	AK146228|Zc3hc1|232679|zinc finger, C3HC type 1	AK167992|Zc3hc1|232679|zinc finger, C3HC type 1
mm9_v1_chr4_+_147242922_147243087	0.00503678	FOXD3.p2	NM_010244|Fv1|14349|Friend virus susceptibility 1
mm9_v1_chr5_+_90893032_90893045	0.0050122	FOXD3.p2	M16111|Alb|11657|albumin
mm9_v1_chr5_-_110537170_110537204	0.00499393	FOXD3.p2	AK159462|Gtpbp6|107999|GTP binding protein 6 (putative)
mm9_v1_chr5_+_135845811_135845865	0.00499153	FOXD3.p2	AK079400|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	NM_145414|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AK156651|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AF412029|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AK149521|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5
mm9_v1_chr11_-_101323802_101323881	0.0048919	FOXD3.p2	BC024586|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK181513|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK183725|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK199516|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)
mm9_v1_chr19_-_8893759_8893788	0.00489031	FOXD3.p2	BC043061|Ttc9c|70387|tetratricopeptide repeat domain 9C	BC058967|Ttc9c|70387|tetratricopeptide repeat domain 9C	AK008753|Ttc9c|70387|tetratricopeptide repeat domain 9C	AK169288|Ttc9c|70387|tetratricopeptide repeat domain 9C	AK169296|Ttc9c|70387|tetratricopeptide repeat domain 9C	NM_027412|Ttc9c|70387|tetratricopeptide repeat domain 9C
mm9_v1_chr16_+_94906703_94906712	0.00488967	FOXD3.p2	BC048837|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr18_-_38760921_38761068	0.00487812	FOXD3.p2	BC050944|Spry4|24066|sprouty homolog 4 (Drosophila)	BC057005|Spry4|24066|sprouty homolog 4 (Drosophila)	NM_011898|Spry4|24066|sprouty homolog 4 (Drosophila)	AK139816|Spry4|24066|sprouty homolog 4 (Drosophila)	AB019280|Spry4|24066|sprouty homolog 4 (Drosophila)	AK037180|Spry4|24066|sprouty homolog 4 (Drosophila)	AK048122|Spry4|24066|sprouty homolog 4 (Drosophila)	AF176906|Spry4|24066|sprouty homolog 4 (Drosophila)
mm9_v1_chr14_-_47896464_47896499	0.00475299	FOXD3.p2	BC063740|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1	AK042443|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1	AK036390|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1
mm9_v1_chr15_+_97800138_97800260	0.00473057	FOXD3.p2	
mm9_v1_chr18_+_35750071_35750097	0.00472059	FOXD3.p2	AK166063|Matr3|17184|matrin 3
mm9_v1_chr18_+_61886043_61886108	0.00471023	FOXD3.p2	AK005240|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	AK133612|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	BC038318|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	BC047208|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene
mm9_v1_chr7_+_136735365_136735478	0.00461906	FOXD3.p2	NM_172255|Wdr11|207425|WD repeat domain 11	AK166369|Wdr11|207425|WD repeat domain 11	AK170058|Wdr11|207425|WD repeat domain 11	BC037177|Wdr11|207425|WD repeat domain 11
mm9_v1_chr11_+_75401554_75401692	0.00457564	FOXD3.p2	AK144618|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152089|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK153569|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK167760|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152874|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK165659|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168720|Pitpna|18738|phosphatidylinositol transfer protein, alpha	U96725|Pitpna|18738|phosphatidylinositol transfer protein, alpha	NM_008850|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK149745|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK151496|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168187|Pitpna|18738|phosphatidylinositol transfer protein, alpha	BC056171|Pitpna|18738|phosphatidylinositol transfer protein, alpha
mm9_v1_chr2_+_112102082_112102129	0.00456305	FOXD3.p2	AK004120|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)	AK012875|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)	NM_025403|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)	BC028497|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)
mm9_v1_chr19_+_29038435_29038489	0.00455227	FOXD3.p2	BC052412|Ppapdc2|74411|phosphatidic acid phosphatase type 2 domain containing 2
mm9_v1_chr17_+_56724423_56724443	0.00454878	FOXD3.p2	BC018200|Safb|224903|scaffold attachment factor B
mm9_v1_chr16_-_55838834_55839011	0.0045223	FOXD3.p2	AB020974|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	BC033044|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
mm9_v1_chr5_+_125997405_125997482	0.00449491	FOXD3.p2	
mm9_v1_chr13_+_30228397_30228535	0.00447593	FOXD3.p2	BC024653|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK020281|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK033388|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK137755|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK146984|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AB297382|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AB305045|Mboat1|218121|membrane bound O-acyltransferase domain containing 1
mm9_v1_chr16_+_94592359_94592368	0.0044447	FOXD3.p2	BC049277|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr6_-_90612275_90612375	0.00444259	FOXD3.p2	AK044711|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr6_-_54767627_54767644	0.00441243	FOXD3.p2	AK011926|2610209C05Rik|70449|RIKEN cDNA 2610209C05 gene
mm9_v1_chr7_-_132635008_132635055	0.00438456	FOXD3.p2	BC031848|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	BC049558|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	NM_026330|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr4_-_6202747_6202782	0.00435114	FOXD3.p2	BC130261|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050020|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050220|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050260|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	NM_007824|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050210|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1
mm9_v1_chr11_+_102297838_102297879	0.00433525	FOXD3.p2	
mm9_v1_chr11_-_88579392_88579430	0.00432384	FOXD3.p2	AK051269|Msi2|76626|Musashi homolog 2 (Drosophila)	AK031365|Msi2|76626|Musashi homolog 2 (Drosophila)	AK153928|Msi2|76626|Musashi homolog 2 (Drosophila)	AK169846|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr9_+_108294086_108294331	0.00431357	FOXD3.p2	AK193942|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK188202|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK181180|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)
mm9_v1_chr2_-_127034015_127034024	0.00431006	FOXD3.p2	AK052786|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene	NM_198630|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene
mm9_v1_chr7_-_30875415_30875528	0.00428105	FOXD3.p2	BC019790|Zfp566|72556|zinc finger protein 566	AK012367|Zfp566|72556|zinc finger protein 566	NM_152814|Zfp566|72556|zinc finger protein 566
mm9_v1_chr2_-_63022140_63022343	0.00427262	FOXD3.p2	AJ291608|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK052366|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK043768|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK034003|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_133207|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm9_v1_chr2_-_89247233_89247234	0.00425298	FOXD3.p2	NM_146790|Olfr1238|258786|olfactory receptor 1238	BC128571|Olfr1238|258786|olfactory receptor 1238
mm9_v1_chr9_-_56008828_56008912	0.00414838	FOXD3.p2	AK159621|Tspan3|56434|tetraspanin 3	AK159324|Tspan3|56434|tetraspanin 3	AK169068|Tspan3|56434|tetraspanin 3	BC043072|Tspan3|56434|tetraspanin 3	AK146130|Tspan3|56434|tetraspanin 3	AK168231|Tspan3|56434|tetraspanin 3	NM_019793|Tspan3|56434|tetraspanin 3
mm9_v1_chr13_-_40825789_40825811	0.0041143	FOXD3.p2	U17287|Tcfap2a|21418|transcription factor AP-2, alpha	AK053704|Tcfap2a|21418|transcription factor AP-2, alpha	NM_001122948|Tcfap2a|21418|transcription factor AP-2, alpha
mm9_v1_chr11_-_118162557_118162687	0.0040952	FOXD3.p2	
mm9_v1_chr2_+_155782193_155782305	0.00403282	FOXD3.p2	AK161443|Cep250|16328|centrosomal protein 250	AK145562|Cep250|16328|centrosomal protein 250	NM_001129999|Cep250|16328|centrosomal protein 250	NM_001130000|Cep250|16328|centrosomal protein 250	NM_008383|Cep250|16328|centrosomal protein 250	NM_177217|Cep250|16328|centrosomal protein 250	BC068153|Cep250|16328|centrosomal protein 250
mm9_v1_chr17_-_56144975_56145021	0.00401943	FOXD3.p2	BC026642|Stap2|106766|signal transducing adaptor family member 2	NM_145934|Stap2|106766|signal transducing adaptor family member 2	AK050172|Stap2|106766|signal transducing adaptor family member 2	AK050131|Stap2|106766|signal transducing adaptor family member 2
mm9_v1_chr8_+_81552335_81552485	0.00399181	FOXD3.p2	BC094552|Zfp827|622675|zinc finger protein 827	NM_178267|Zfp827|622675|zinc finger protein 827	BC151183|Zfp827|622675|zinc finger protein 827	AK154905|Zfp827|622675|zinc finger protein 827
mm9_v1_chr6_+_149090037_149090167	0.00397987	FOXD3.p2	AK160463|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK029471|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC046911|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC065807|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	NM_177101|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK077292|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC048711|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK132096|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene
mm9_v1_chr12_+_66137309_66137322	0.00397615	FOXD3.p2	AK154170|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)	NM_177806|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm9_v1_chr8_+_112514335_112514362	0.00396086	FOXD3.p2	NM_146214|Tat|234724|tyrosine aminotransferase	AK090244|Tat|234724|tyrosine aminotransferase	AK149383|Tat|234724|tyrosine aminotransferase	AK149526|Tat|234724|tyrosine aminotransferase	BC030728|Tat|234724|tyrosine aminotransferase	BC024120|Tat|234724|tyrosine aminotransferase	BC028821|Tat|234724|tyrosine aminotransferase	BC023949|Tat|234724|tyrosine aminotransferase	BC030729|Tat|234724|tyrosine aminotransferase
mm9_v1_chr13_-_21622917_21622982	0.00395281	FOXD3.p2	BC050152|Zfp192|93681|zinc finger protein 192	AK032718|Zfp192|93681|zinc finger protein 192	AK134299|Zfp192|93681|zinc finger protein 192	NM_139141|Zfp192|93681|zinc finger protein 192
mm9_v1_chr3_-_142456600_142456910	0.00393911	FOXD3.p2	AK140746|Pkn2|109333|protein kinase N2	AK084887|Pkn2|109333|protein kinase N2	AK082921|Pkn2|109333|protein kinase N2
mm9_v1_chr5_+_91456489_91456542	0.00392477	FOXD3.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr9_-_41932195_41932209	0.00391404	FOXD3.p2	AB015790|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing
mm9_v1_chr7_-_87547589_87547748	0.00387659	FOXD3.p2	L26489|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_011046|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr18_+_54021746_54021814	0.00381217	FOXD3.p2	AK049379|Csnk1g3|70425|casein kinase 1, gamma 3	NM_152809|Csnk1g3|70425|casein kinase 1, gamma 3	AK080491|Csnk1g3|70425|casein kinase 1, gamma 3
mm9_v1_chr12_-_82068951_82069043	0.00380969	FOXD3.p2	U95131|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	U95132|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	AB003303|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	BC021154|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1
mm9_v1_chr17_+_30272123_30272409	0.00380763	FOXD3.p2	BC027161|Zfand3|21769|zinc finger, AN1-type domain 3	EF437371|Zfand3|21769|zinc finger, AN1-type domain 3	BC024483|Zfand3|21769|zinc finger, AN1-type domain 3
mm9_v1_chr6_+_35202653_35202668	0.00375977	FOXD3.p2	AK082166|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene
mm9_v1_chrX_-_103207106_103207254	0.00372146	FOXD3.p2	AK144696|Magt1|67075|magnesium transporter 1	AK012185|Magt1|67075|magnesium transporter 1	AK013243|Magt1|67075|magnesium transporter 1	AK136622|Magt1|67075|magnesium transporter 1	BC003881|Magt1|67075|magnesium transporter 1	AK018623|Magt1|67075|magnesium transporter 1	AK010320|Magt1|67075|magnesium transporter 1	DQ000005|Magt1|67075|magnesium transporter 1	NM_001190409|Magt1|67075|magnesium transporter 1	NM_025952|Magt1|67075|magnesium transporter 1
mm9_v1_chr4_-_150421459_150421590	0.00371732	FOXD3.p2	
mm9_v1_chr2_+_37298785_37298902	0.0037164	FOXD3.p2	NM_146121|Rabgap1|227800|RAB GTPase activating protein 1	AK031315|Rabgap1|227800|RAB GTPase activating protein 1	AK021286|Rabgap1|227800|RAB GTPase activating protein 1	BC138337|Rabgap1|227800|RAB GTPase activating protein 1
mm9_v1_chr15_+_99239082_99239188	0.00371578	FOXD3.p2	AK039762|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK003483|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr4_+_126803283_126803296	0.00367645	FOXD3.p2	AK160613|Gm12942|100039968|predicted gene 12942	NM_001099319|Gm12942|100039968|predicted gene 12942
mm9_v1_chr19_-_38199737_38199810	0.00366038	FOXD3.p2	BC093529|Rbp4|19662|retinol binding protein 4, plasma	NM_001159487|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr2_+_14310024_14310041	0.00361305	FOXD3.p2	NM_001012305|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	AK134622|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC089362|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113764|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113765|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12
mm9_v1_chr1_+_75435521_75435559	0.00359359	FOXD3.p2	AK189243|Gmppa|69080|GDP-mannose pyrophosphorylase A
mm9_v1_chr17_-_35164860_35164960	0.00358639	FOXD3.p2	AK019275|Ng23|78376|Ng23 protein	BC147772|Ng23|78376|Ng23 protein	BC147780|Ng23|78376|Ng23 protein	BC172157|Ng23|78376|Ng23 protein	NM_023893|Ng23|78376|Ng23 protein
mm9_v1_chr10_-_127986187_127986227	0.00354459	FOXD3.p2	NM_018860|Rpl41|67945|ribosomal protein L41
mm9_v1_chr8_-_27109536_27109553	0.00350024	FOXD3.p2	
mm9_v1_chr14_+_63456514_63456721	0.00348732	FOXD3.p2	AK086275|Wdfy2|268752|WD repeat and FYVE domain containing 2	NM_175546|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK131958|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK169499|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK151817|Wdfy2|268752|WD repeat and FYVE domain containing 2	BC116632|Wdfy2|268752|WD repeat and FYVE domain containing 2	AK045072|Wdfy2|268752|WD repeat and FYVE domain containing 2
mm9_v1_chr11_+_3102997_3103023	0.00336714	FOXD3.p2	AK165678|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	NM_001166547|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	NM_001166549|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	AK128990|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1
mm9_v1_chr3_+_138190223_138190257	0.00334489	FOXD3.p2	AK167097|Eif4e|13684|eukaryotic translation initiation factor 4E	M61731|Eif4e|13684|eukaryotic translation initiation factor 4E	AK082867|Eif4e|13684|eukaryotic translation initiation factor 4E	AK146757|Eif4e|13684|eukaryotic translation initiation factor 4E	BC010759|Eif4e|13684|eukaryotic translation initiation factor 4E	BC085087|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr7_-_30954705_30954770	0.00330314	FOXD3.p2	AJ224763|Zfp146|26465|zinc finger protein 146	AK047696|Zfp146|26465|zinc finger protein 146	NM_011980|Zfp146|26465|zinc finger protein 146	AK037311|Zfp146|26465|zinc finger protein 146
mm9_v1_chr3_+_152377070_152377075	0.00328161	FOXD3.p2	AK082806|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K
mm9_v1_chr9_+_57770320_57770335	0.00324467	FOXD3.p2	AK207788|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)
mm9_v1_chr17_-_47639222_47639245	0.00313961	FOXD3.p2	BC057895|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	BC023756|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AF222802|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK045108|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK049949|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK076486|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK086656|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK161658|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK162110|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	NM_022015|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq
mm9_v1_chr7_+_129776837_129777102	0.00308165	FOXD3.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr7_-_135078992_135079041	0.00303467	FOXD3.p2	AK021185|Prss36|77613|protease, serine, 36
mm9_v1_chr6_-_56873822_56873940	0.00299663	FOXD3.p2	AK011894|Nt5c3|107569|5'-nucleotidase, cytosolic III	AK011525|Nt5c3|107569|5'-nucleotidase, cytosolic III	NM_026004|Nt5c3|107569|5'-nucleotidase, cytosolic III
mm9_v1_chr8_+_89240252_89240401	0.00299316	FOXD3.p2	AK197630|Lonp2|66887|lon peptidase 2, peroxisomal
mm9_v1_chr18_+_78021267_78021344	0.00297347	FOXD3.p2	
mm9_v1_chr17_-_53678775_53678775	0.00293504	FOXD3.p2	AK076579|4921523A10Rik|110332|RIKEN cDNA 4921523A10 gene	NM_173449|4921523A10Rik|110332|RIKEN cDNA 4921523A10 gene
mm9_v1_chr19_+_10703592_10703743	0.00291245	FOXD3.p2	AK191685|Ddb1|13194|damage specific DNA binding protein 1	AK195557|Ddb1|13194|damage specific DNA binding protein 1	AK195744|Ddb1|13194|damage specific DNA binding protein 1	AK004284|Ddb1|13194|damage specific DNA binding protein 1
mm9_v1_chr15_-_32174172_32174174	0.00290383	FOXD3.p2	AK007520|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chr7_+_109054350_109054514	0.0028696	FOXD3.p2	NM_025605|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK010247|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK013389|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC126973|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK144476|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC020142|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK003509|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC092062|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK009320|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC096412|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK019947|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK203171|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene
mm9_v1_chr5_-_17341512_17341522	0.00281173	FOXD3.p2	AK052825|Cd36|12491|CD36 antigen
mm9_v1_chr6_-_115573479_115573509	0.00279996	FOXD3.p2	AK190457|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr2_-_75816235_75816356	0.00278517	FOXD3.p2	NM_001081228|Ttc30a2|620631|tetratricopeptide repeat domain 30A2	BC157934|Ttc30a2|620631|tetratricopeptide repeat domain 30A2	BC172090|Ttc30a2|620631|tetratricopeptide repeat domain 30A2	BC158130|Ttc30a2|620631|tetratricopeptide repeat domain 30A2
mm9_v1_chr12_+_4850108_4850199	0.00275851	FOXD3.p2	NM_001170858|BC068281|238037|cDNA sequence BC068281	NM_173416|BC068281|238037|cDNA sequence BC068281	AK163398|BC068281|238037|cDNA sequence BC068281	AK040407|BC068281|238037|cDNA sequence BC068281	BC068281|BC068281|238037|cDNA sequence BC068281	AK155130|BC068281|238037|cDNA sequence BC068281	AK164024|BC068281|238037|cDNA sequence BC068281
mm9_v1_chr2_+_172198490_172198574	0.00273602	FOXD3.p2	AK177487|Cstf1|67337|cleavage stimulation factor, 3' pre-RNA, subunit 1
mm9_v1_chr3_-_113332817_113333068	0.00268054	FOXD3.p2	AK173272|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK179549|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK187884|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK084372|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK013288|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161974|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK163729|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK134241|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	BC043695|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161063|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_001038696|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_026043|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3
mm9_v1_chr13_+_48356487_48356596	0.00267145	FOXD3.p2	AK041164|Id4|15904|inhibitor of DNA binding 4
mm9_v1_chr17_+_45701100_45701100	0.00262198	FOXD3.p2	AK167343|Slc35b2|73836|solute carrier family 35, member B2	NM_028662|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr13_+_91881065_91881204	0.0025992	FOXD3.p2	AK034622|Acot12|74156|acyl-CoA thioesterase 12	AK004905|Acot12|74156|acyl-CoA thioesterase 12	AK033663|Acot12|74156|acyl-CoA thioesterase 12	NM_028790|Acot12|74156|acyl-CoA thioesterase 12	AB078618|Acot12|74156|acyl-CoA thioesterase 12	BC025852|Acot12|74156|acyl-CoA thioesterase 12
mm9_v1_chr2_-_154429414_154429464	0.00259661	FOXD3.p2	AK003127|Pxmp4|59038|peroxisomal membrane protein 4	AK019381|Pxmp4|59038|peroxisomal membrane protein 4	AK013793|Pxmp4|59038|peroxisomal membrane protein 4
mm9_v1_chr10_-_24431707_24431809	0.00259199	FOXD3.p2	AK029600|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AF339910|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AK145233|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AK036952|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AK088857|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	AK164619|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1
mm9_v1_chr11_-_95137035_95137140	0.00257928	FOXD3.p2	AK179739|Myst2|217127|MYST histone acetyltransferase 2	AK178421|Myst2|217127|MYST histone acetyltransferase 2	AK179227|Myst2|217127|MYST histone acetyltransferase 2	AK186092|Myst2|217127|MYST histone acetyltransferase 2	AK203203|Myst2|217127|MYST histone acetyltransferase 2	AK204177|Myst2|217127|MYST histone acetyltransferase 2	AK212451|Myst2|217127|MYST histone acetyltransferase 2
mm9_v1_chr3_-_10208575_10208582	0.00255681	FOXD3.p2	AK003143|Fabp4|11770|fatty acid binding protein 4, adipocyte	AK088535|Fabp4|11770|fatty acid binding protein 4, adipocyte	NM_024406|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr9_+_114632997_114633011	0.00254712	FOXD3.p2	
mm9_v1_chr2_+_131036279_131036392	0.00253376	FOXD3.p2	
mm9_v1_chr11_-_49525870_49525985	0.00249021	FOXD3.p2	AK187687|Cnot6|104625|CCR4-NOT transcription complex, subunit 6
mm9_v1_chr18_+_32416881_32416904	0.00245212	FOXD3.p2	BC024446|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm9_v1_chr3_-_152003317_152003373	0.00241954	FOXD3.p2	BC138328|Fam73a|215708|family with sequence similarity 73, member A	BC138329|Fam73a|215708|family with sequence similarity 73, member A	AK166051|Fam73a|215708|family with sequence similarity 73, member A	BC059928|Fam73a|215708|family with sequence similarity 73, member A	AK044739|Fam73a|215708|family with sequence similarity 73, member A	BC098205|Fam73a|215708|family with sequence similarity 73, member A	AK045347|Fam73a|215708|family with sequence similarity 73, member A	AK143366|Fam73a|215708|family with sequence similarity 73, member A	AK085017|Fam73a|215708|family with sequence similarity 73, member A	NM_001162375|Fam73a|215708|family with sequence similarity 73, member A	NM_174868|Fam73a|215708|family with sequence similarity 73, member A
mm9_v1_chr13_+_48356795_48356817	0.00236629	FOXD3.p2	NM_031166|Id4|15904|inhibitor of DNA binding 4	X75018|Id4|15904|inhibitor of DNA binding 4	BC145367|Id4|15904|inhibitor of DNA binding 4
mm9_v1_chr16_-_92697567_92697590	0.0023603	FOXD3.p2	AK155262|Runx1|12394|runt related transcription factor 1	D26532|Runx1|12394|runt related transcription factor 1	NM_001111023|Runx1|12394|runt related transcription factor 1	NM_009821|Runx1|12394|runt related transcription factor 1
mm9_v1_chr2_+_145760519_145760551	0.00233508	FOXD3.p2	AK019712|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK038772|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	NM_175280|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK086391|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107030|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107031|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC057361|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC058733|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene
mm9_v1_chr5_+_117825813_117825951	0.00233192	FOXD3.p2	
mm9_v1_chr1_-_173177227_173177229	0.0023149	FOXD3.p2	BC016097|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr13_-_98786061_98786107	0.00228719	FOXD3.p2	AK048676|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr17_+_73186929_73186985	0.0022861	FOXD3.p2	BC085109|Ypel5|383295|yippee-like 5 (Drosophila)
mm9_v1_chr3_+_97705125_97705203	0.00228426	FOXD3.p2	AK010363|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK034973|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK017237|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK037918|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK088514|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK134215|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	NM_011342|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK089928|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	BC009024|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	U91538|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
mm9_v1_chr7_-_48648629_48648748	0.00225064	FOXD3.p2	BC052842|AI987944|233168|expressed sequence AI987944	BC138015|AI987944|233168|expressed sequence AI987944	NM_183167|AI987944|233168|expressed sequence AI987944	BC036560|AI987944|233168|expressed sequence AI987944	BC099396|AI987944|233168|expressed sequence AI987944
mm9_v1_chr15_-_82184631_82184726	0.00225052	FOXD3.p2	AK002749|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK010988|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK012328|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	BC048451|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	NM_025987|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)
mm9_v1_chr19_+_10701999_10702078	0.00220632	FOXD3.p2	AK192850|Ddb1|13194|damage specific DNA binding protein 1	AK215812|Ddb1|13194|damage specific DNA binding protein 1
mm9_v1_chr9_+_15043658_15043696	0.00215311	FOXD3.p2	AK161045|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene
mm9_v1_chr1_-_156993820_156993943	0.00211974	FOXD3.p2	AF010448|Mr1|15064|major histocompatibility complex, class I-related	AF010449|Mr1|15064|major histocompatibility complex, class I-related	AF010450|Mr1|15064|major histocompatibility complex, class I-related	AF010452|Mr1|15064|major histocompatibility complex, class I-related	AF010453|Mr1|15064|major histocompatibility complex, class I-related	U94989|Mr1|15064|major histocompatibility complex, class I-related	AK162712|Mr1|15064|major histocompatibility complex, class I-related	NM_008209|Mr1|15064|major histocompatibility complex, class I-related	BC026137|Mr1|15064|major histocompatibility complex, class I-related	AK042119|Mr1|15064|major histocompatibility complex, class I-related	AK137171|Mr1|15064|major histocompatibility complex, class I-related	AK144040|Mr1|15064|major histocompatibility complex, class I-related	AK041171|Mr1|15064|major histocompatibility complex, class I-related
mm9_v1_chr5_-_136386045_136386060	0.0020651	FOXD3.p2	AK179188|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK181145|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK191464|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr3_+_95965959_95965978	0.00202201	FOXD3.p2	BC051083|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr11_-_50125157_50125288	0.00198726	FOXD3.p2	L23865|Canx|12330|calnexin	L18888|Canx|12330|calnexin
mm9_v1_chr2_+_153171562_153171582	0.00198333	FOXD3.p2	AK081063|Asxl1|228790|additional sex combs like 1 (Drosophila)
mm9_v1_chr3_+_63100101_63100109	0.00195934	FOXD3.p2	AK033824|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr7_+_27814096_27814122	0.00194447	FOXD3.p2	BC018356|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	NM_133657|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	BC094017|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	L06463|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12
mm9_v1_chr5_-_149363989_149364264	0.00194201	FOXD3.p2	BC025595|Ubl3|24109|ubiquitin-like 3	AK145952|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr2_+_129627196_129627289	0.00188002	FOXD3.p2	BC047277|Stk35|67333|serine/threonine kinase 35
mm9_v1_chr7_-_139346304_139346369	0.00172905	FOXD3.p2	AK038874|Cpxm2|55987|carboxypeptidase X 2 (M14 family)	BC021444|Cpxm2|55987|carboxypeptidase X 2 (M14 family)
mm9_v1_chr6_-_148894953_148895000	0.00172099	FOXD3.p2	BC076599|Fam60a|56306|family with sequence similarity 60, member A	NM_019643|Fam60a|56306|family with sequence similarity 60, member A	AK166569|Fam60a|56306|family with sequence similarity 60, member A	AK145384|Fam60a|56306|family with sequence similarity 60, member A
mm9_v1_chr16_+_38742446_38742523	0.00171794	FOXD3.p2	AK041692|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK136637|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
mm9_v1_chr6_-_124861656_124861722	0.00166703	FOXD3.p2	BC120591|Lag3|16768|lymphocyte-activation gene 3	NM_008479|Lag3|16768|lymphocyte-activation gene 3	X98113|Lag3|16768|lymphocyte-activation gene 3
mm9_v1_chr9_-_20189550_20189620	0.00160542	FOXD3.p2	AK006129|Zfp560|434377|zinc finger protein 560	AK012259|Zfp560|434377|zinc finger protein 560	AK009475|Zfp560|434377|zinc finger protein 560	AK009542|Zfp560|434377|zinc finger protein 560	AK010001|Zfp560|434377|zinc finger protein 560	BC141211|Zfp560|434377|zinc finger protein 560	AK141494|Zfp560|434377|zinc finger protein 560	NM_001004190|Zfp560|434377|zinc finger protein 560	AK012062|Zfp560|434377|zinc finger protein 560
mm9_v1_chr13_+_31650033_31650038	0.00158413	FOXD3.p2	AK147202|Foxq1|15220|forkhead box Q1	NM_008239|Foxq1|15220|forkhead box Q1
mm9_v1_chr11_+_43247209_43247232	0.00157641	FOXD3.p2	NM_148673|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	NM_198936|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr17_+_13208071_13208135	0.00156372	FOXD3.p2	AK206580|Sod2|20656|superoxide dismutase 2, mitochondrial
mm9_v1_chr15_+_81494364_81494367	0.00156151	FOXD3.p2	AK132012|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK156236|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	NM_145993|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK036510|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr18_+_79306780_79306919	0.00155007	FOXD3.p2	AK048807|Gm10265|791301|predicted gene 10265
mm9_v1_chr2_+_119456102_119456195	0.00149534	FOXD3.p2	BC009096|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr8_-_72149070_72149075	0.00148864	FOXD3.p2	AK139223|Zfp868|234362|zinc finger protein 868	NM_001045553|Zfp868|234362|zinc finger protein 868
mm9_v1_chr3_-_63733305_63733317	0.0014667	FOXD3.p2	AK087526|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene	NM_177856|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene
mm9_v1_chr9_-_21043659_21043781	0.00144445	FOXD3.p2	AK150437|Keap1|50868|kelch-like ECH-associated protein 1	AK152142|Keap1|50868|kelch-like ECH-associated protein 1	AK004738|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110305|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110306|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110307|Keap1|50868|kelch-like ECH-associated protein 1	NM_016679|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chr15_-_79845237_79845237	0.00142216	FOXD3.p2	BC053430|Pdgfb|18591|platelet derived growth factor, B polypeptide	NM_011057|Pdgfb|18591|platelet derived growth factor, B polypeptide
mm9_v1_chr5_-_17355533_17355611	0.00141822	FOXD3.p2	AK172162|Cd36|12491|CD36 antigen	BC010262|Cd36|12491|CD36 antigen	AK150648|Cd36|12491|CD36 antigen	NM_001159556|Cd36|12491|CD36 antigen	NM_001159557|Cd36|12491|CD36 antigen
mm9_v1_chr10_+_126437764_126437859	0.00139041	FOXD3.p2	NM_009635|Avil|11567|advillin	AF059486|Avil|11567|advillin	AK154851|Avil|11567|advillin	AK155900|Avil|11567|advillin	AK170878|Avil|11567|advillin	AK171324|Avil|11567|advillin	AK171319|Avil|11567|advillin	AF041448|Avil|11567|advillin	BC119222|Avil|11567|advillin	BC120545|Avil|11567|advillin
mm9_v1_chr13_-_104710374_104710739	0.00135518	FOXD3.p2	BC141178|Erbb2ip|59079|Erbb2 interacting protein	BC141188|Erbb2ip|59079|Erbb2 interacting protein	BC145498|Erbb2ip|59079|Erbb2 interacting protein	BC145509|Erbb2ip|59079|Erbb2 interacting protein	AK169529|Erbb2ip|59079|Erbb2 interacting protein	NM_001005868|Erbb2ip|59079|Erbb2 interacting protein	NM_021563|Erbb2ip|59079|Erbb2 interacting protein
mm9_v1_chr5_-_22252628_22252724	0.00128706	FOXD3.p2	BC030424|A930003O13Rik|330052|RIKEN cDNA A930003O13 gene	AK044256|A930003O13Rik|330052|RIKEN cDNA A930003O13 gene
mm9_v1_chr12_-_86691817_86691869	0.0012807	FOXD3.p2	AK191153|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK198152|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK201939|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK206502|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK207697|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK216393|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC006774|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr12_+_56404272_56404278	0.00127866	FOXD3.p2	AK172942|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr11_-_6428731_6428778	0.00123094	FOXD3.p2	AK160548|Gm11974|100041286|predicted gene 11974
mm9_v1_chr11_-_101087730_101087737	0.00120842	FOXD3.p2	AK154565|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr3_-_63733328_63733393	0.0011757	FOXD3.p2	BC125500|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene	BC132160|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene
mm9_v1_chr7_+_111054855_111054855	0.00115392	FOXD3.p2	BC137766|Olfr65|18365|olfactory receptor 65	NM_013616|Olfr65|18365|olfactory receptor 65
mm9_v1_chr2_+_34628721_34628809	0.00114634	FOXD3.p2	AK219322|Hspa5|14828|heat shock protein 5
mm9_v1_chr12_+_113917038_113917088	0.00105072	FOXD3.p2	BC046387|Zbtb42|382639|zinc finger and BTB domain containing 42	NM_001100460|Zbtb42|382639|zinc finger and BTB domain containing 42
mm9_v1_chr2_-_136716832_136716934	0.00103327	FOXD3.p2	AK008160|Mkks|59030|McKusick-Kaufman syndrome protein	AK008406|Mkks|59030|McKusick-Kaufman syndrome protein	BC024359|Mkks|59030|McKusick-Kaufman syndrome protein	AK004987|Mkks|59030|McKusick-Kaufman syndrome protein	BC100336|Mkks|59030|McKusick-Kaufman syndrome protein	AK032528|Mkks|59030|McKusick-Kaufman syndrome protein	AK032554|Mkks|59030|McKusick-Kaufman syndrome protein	AF254074|Mkks|59030|McKusick-Kaufman syndrome protein
mm9_v1_chr3_+_14533787_14533872	0.00102377	FOXD3.p2	AK004646|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	NM_001163579|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	NM_001163580|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	NM_028915|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC138734|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC138735|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC099680|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC061202|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK030355|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK016559|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK173256|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK029563|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1
mm9_v1_chr3_-_51129908_51129958	0.00102063	FOXD3.p2	AF256216|Elf2|69257|E74-like factor 2	AF256217|Elf2|69257|E74-like factor 2	NM_023502|Elf2|69257|E74-like factor 2	BC092057|Elf2|69257|E74-like factor 2
mm9_v1_chr11_-_69227176_69227176	0.000979334	FOXD3.p2	NM_001017426|Kdm6b|216850|KDM1 lysine (K)-specific demethylase 6B
mm9_v1_chr17_+_38040466_38040492	0.00097701	FOXD3.p2	BC132433|Olfr127|258374|olfactory receptor 127	BC145997|Olfr127|258374|olfactory receptor 127	NM_146377|Olfr127|258374|olfactory receptor 127
mm9_v1_chr8_-_118231677_118231736	0.000970826	FOXD3.p2	S74567|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	AK019255|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr3_+_88520743_88520881	0.000870447	FOXD3.p2	NM_001163310|Rit1|19769|Ras-like without CAAX 1	NM_009069|Rit1|19769|Ras-like without CAAX 1	AK014126|Rit1|19769|Ras-like without CAAX 1	AK164196|Rit1|19769|Ras-like without CAAX 1	AK005357|Rit1|19769|Ras-like without CAAX 1	AK168254|Rit1|19769|Ras-like without CAAX 1	BC012694|Rit1|19769|Ras-like without CAAX 1	AK018785|Rit1|19769|Ras-like without CAAX 1	U71205|Rit1|19769|Ras-like without CAAX 1
mm9_v1_chr1_+_163899318_163899328	0.000803385	FOXD3.p2	AK016394|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	NM_001039045|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	NM_026078|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	AK152660|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C
mm9_v1_chr9_+_47338255_47338425	0.000803367	FOXD3.p2	BC090970|Cadm1|54725|cell adhesion molecule 1	AF434663|Cadm1|54725|cell adhesion molecule 1	AK013911|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr17_+_24665193_24665201	0.000781051	FOXD3.p2	AK011460|2610019E17Rik|75614|RIKEN cDNA 2610019E17 gene
mm9_v1_chr5_+_138526303_138526341	0.000766731	FOXD3.p2	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr11_+_115106897_115107042	0.0006978	FOXD3.p2	
mm9_v1_chr6_-_25639812_25639825	0.000670538	FOXD3.p2	AK032525|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr13_+_97408920_97408964	0.000664831	FOXD3.p2	AK020301|Col4a3bp|68018|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm9_v1_chr11_-_79337251_79337263	0.000664751	FOXD3.p2	NM_001077496|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr17_+_6106829_6106853	0.000653825	FOXD3.p2	NM_001103181|Tulp4|68842|tubby like protein 4
mm9_v1_chr7_-_97624504_97624555	0.000634408	FOXD3.p2	AK003201|Tmem126b|68472|transmembrane protein 126B	BC049680|Tmem126b|68472|transmembrane protein 126B	NM_026734|Tmem126b|68472|transmembrane protein 126B
mm9_v1_chr2_-_163896796_163896916	0.000584241	FOXD3.p2	BC018278|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK011786|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK168329|Tomm34|67145|translocase of outer mitochondrial membrane 34	NM_025996|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK017699|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK075873|Tomm34|67145|translocase of outer mitochondrial membrane 34
mm9_v1_chr8_+_86520110_86520238	0.000497871	FOXD3.p2	AK131888|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha
mm9_v1_chr10_-_19627418_19627496	0.000472739	FOXD3.p2	AK160195|Pex7|18634|peroxisomal biogenesis factor 7	BC132213|Pex7|18634|peroxisomal biogenesis factor 7	BC132503|Pex7|18634|peroxisomal biogenesis factor 7	BC145300|Pex7|18634|peroxisomal biogenesis factor 7	U69171|Pex7|18634|peroxisomal biogenesis factor 7	AK053868|Pex7|18634|peroxisomal biogenesis factor 7	AK004687|Pex7|18634|peroxisomal biogenesis factor 7	NM_001161825|Pex7|18634|peroxisomal biogenesis factor 7	NM_008822|Pex7|18634|peroxisomal biogenesis factor 7
mm9_v1_chr12_-_81269174_81269180	0.000463757	FOXD3.p2	AK037382|Actn1|109711|actinin, alpha 1
mm9_v1_chr17_+_56724247_56724295	0.000451868	FOXD3.p2	AK014067|Safb|224903|scaffold attachment factor B
mm9_v1_chr6_-_83456775_83456962	0.000440643	FOXD3.p2	AK167071|Dguok|27369|deoxyguanosine kinase	U90524|Dguok|27369|deoxyguanosine kinase	AJ133749|Dguok|27369|deoxyguanosine kinase	AY037862|Dguok|27369|deoxyguanosine kinase	BC012647|Dguok|27369|deoxyguanosine kinase	AK035281|Dguok|27369|deoxyguanosine kinase	BC094920|Dguok|27369|deoxyguanosine kinase	NM_001162521|Dguok|27369|deoxyguanosine kinase	NM_013764|Dguok|27369|deoxyguanosine kinase
mm9_v1_chr19_+_23240506_23240595	0.000433061	FOXD3.p2	AK187278|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr5_+_122821868_122821884	0.000399613	FOXD3.p2	AK042405|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr10_+_61245998_61246044	0.000387843	FOXD3.p2	
mm9_v1_chr8_-_86794243_86794302	0.00034219	FOXD3.p2	AK015911|Ccdc130|67736|coiled-coil domain containing 130	NM_026350|Ccdc130|67736|coiled-coil domain containing 130
mm9_v1_chr17_-_46169322_46169332	0.000327015	FOXD3.p2	NM_001025250|Vegfa|22339|vascular endothelial growth factor A	NM_001025257|Vegfa|22339|vascular endothelial growth factor A	NM_009505|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr11_-_102546084_102546176	0.000288972	FOXD3.p2	
mm9_v1_chr1_-_173177146_173177172	0.000255884	FOXD3.p2	
mm9_v1_chr12_-_113749363_113749407	0.000184606	FOXD3.p2	AK047810|Tmem179|104885|transmembrane protein 179	NM_178915|Tmem179|104885|transmembrane protein 179	BC046482|Tmem179|104885|transmembrane protein 179	AK090230|Tmem179|104885|transmembrane protein 179
mm9_v1_chr1_-_121545158_121545240	0.000183961	FOXD3.p2	BC003937|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chr19_-_4801605_4801652	0.000149949	FOXD3.p2	
mm9_v1_chr15_-_32174187_32174189	0.000121144	FOXD3.p2	AK007719|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chr3_-_95686120_95686174	4.52207e-05	FOXD3.p2	AK156084|Gm129|229599|predicted gene 129	AK164001|Gm129|229599|predicted gene 129	NM_001033302|Gm129|229599|predicted gene 129
mm9_v1_chr9_+_39421128_39421153	3.37704e-05	FOXD3.p2	BC125353|Olfr148|258498|olfactory receptor 148	BC132239|Olfr148|258498|olfactory receptor 148	NM_146505|Olfr148|258498|olfactory receptor 148
mm9_v1_chr13_+_51245730_51245816	2.51739e-05	FOXD3.p2	
