mm9_v1_chr1_-_97564139_97564174	7.13273	FOXN1.p2	BC060112|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AJ223956|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_001159745|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_009183|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	X86000|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr11_-_11937330_11937512	6.86615	FOXN1.p2	AK030727|Grb10|14783|growth factor receptor bound protein 10	BC053842|Grb10|14783|growth factor receptor bound protein 10	AF022072|Grb10|14783|growth factor receptor bound protein 10	AK012646|Grb10|14783|growth factor receptor bound protein 10	AK163841|Grb10|14783|growth factor receptor bound protein 10	AK032927|Grb10|14783|growth factor receptor bound protein 10	NM_010345|Grb10|14783|growth factor receptor bound protein 10	FJ425892|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr2_-_73613381_73613446	6.10296	FOXN1.p2	NM_001113246|Chn1|108699|chimerin (chimaerin) 1	NM_001166603|Chn1|108699|chimerin (chimaerin) 1
mm9_v1_chr7_-_81158546_81158567	4.31848	FOXN1.p2	X83562|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	BC096546|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	NM_009181|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
mm9_v1_chr7_-_26082941_26082973	4.15351	FOXN1.p2	AK167496|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	BC067015|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	AK039375|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	AK154547|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	NM_008776|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	U57746|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
mm9_v1_chr4_-_22415277_22415277	4.13683	FOXN1.p2	NM_008899|Pou3f2|18992|POU domain, class 3, transcription factor 2
mm9_v1_chr13_-_56353523_56353523	3.77983	FOXN1.p2	BC062148|Neurog1|18014|neurogenin 1	NM_010896|Neurog1|18014|neurogenin 1
mm9_v1_chr1_-_97564064_97564129	3.65079	FOXN1.p2	AK041723|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK003690|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr8_-_26707934_26708016	3.4086	FOXN1.p2	AK076546|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	BC055685|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	NM_173012|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK041725|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK031563|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK034050|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK050943|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2	AK163507|Letm2|270035|leucine zipper-EF-hand containing transmembrane protein 2
mm9_v1_chr2_-_181333786_181333936	3.24636	FOXN1.p2	AK053884|Samd10|229011|sterile alpha motif domain containing 10	AK053048|Samd10|229011|sterile alpha motif domain containing 10	BC052921|Samd10|229011|sterile alpha motif domain containing 10	NM_172676|Samd10|229011|sterile alpha motif domain containing 10	AK171151|Samd10|229011|sterile alpha motif domain containing 10	BC019475|Samd10|229011|sterile alpha motif domain containing 10	AK164204|Samd10|229011|sterile alpha motif domain containing 10
mm9_v1_chr5_-_115750940_115750978	3.11326	FOXN1.p2	AK002522|Dynll1|56455|dynein light chain LC8-type 1	AK010614|Dynll1|56455|dynein light chain LC8-type 1	AK010685|Dynll1|56455|dynein light chain LC8-type 1	AK013721|Dynll1|56455|dynein light chain LC8-type 1	AK013725|Dynll1|56455|dynein light chain LC8-type 1	AK082923|Dynll1|56455|dynein light chain LC8-type 1	AK147977|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr7_-_88974235_88974382	3.0831	FOXN1.p2	BC072618|Btbd1|83962|BTB (POZ) domain containing 1	NM_146193|Btbd1|83962|BTB (POZ) domain containing 1	BC087937|Btbd1|83962|BTB (POZ) domain containing 1	AK088345|Btbd1|83962|BTB (POZ) domain containing 1
mm9_v1_chr5_-_84846348_84846408	3.01094	FOXN1.p2	BC057401|Epha5|13839|Eph receptor A5	AK133698|Epha5|13839|Eph receptor A5	AK034289|Epha5|13839|Eph receptor A5	AK049740|Epha5|13839|Eph receptor A5	NM_007937|Epha5|13839|Eph receptor A5
mm9_v1_chr13_+_54605152_54605165	2.97822	FOXN1.p2	NM_176987|4732471D19Rik|319719|RIKEN cDNA 4732471D19 gene
mm9_v1_chr4_-_22415444_22415519	2.96952	FOXN1.p2	X66602|Pou3f2|18992|POU domain, class 3, transcription factor 2
mm9_v1_chr14_+_115491436_115491496	2.85589	FOXN1.p2	AK134807|Gpc5|103978|glypican 5	NM_175500|Gpc5|103978|glypican 5	AK038547|Gpc5|103978|glypican 5	AK084223|Gpc5|103978|glypican 5
mm9_v1_chr11_-_84338922_84339036	2.75243	FOXN1.p2	Z27410|Lhx1|16869|LIM homeobox protein 1	BC092374|Lhx1|16869|LIM homeobox protein 1	NM_008498|Lhx1|16869|LIM homeobox protein 1	AK141086|Lhx1|16869|LIM homeobox protein 1
mm9_v1_chr2_-_153270059_153270214	2.73395	FOXN1.p2	BC079552|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK157863|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK139459|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	NM_001001986|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene
mm9_v1_chr1_+_55145132_55145232	2.73312	FOXN1.p2	AK088121|Hspe1|15528|heat shock protein 1 (chaperonin 10)	U09659|Hspe1|15528|heat shock protein 1 (chaperonin 10)	BC099385|Hspe1|15528|heat shock protein 1 (chaperonin 10)	AK151935|Hspe1|15528|heat shock protein 1 (chaperonin 10)	AK133876|Hspe1|15528|heat shock protein 1 (chaperonin 10)	BC024385|Hspe1|15528|heat shock protein 1 (chaperonin 10)
mm9_v1_chr2_-_157392026_157392132	2.62751	FOXN1.p2	AB037891|Blcap|53619|bladder cancer associated protein homolog (human)	BC026935|Blcap|53619|bladder cancer associated protein homolog (human)	BC083339|Blcap|53619|bladder cancer associated protein homolog (human)	AK038884|Blcap|53619|bladder cancer associated protein homolog (human)	AK011673|Blcap|53619|bladder cancer associated protein homolog (human)	AK170338|Blcap|53619|bladder cancer associated protein homolog (human)	AK018127|Blcap|53619|bladder cancer associated protein homolog (human)	NM_016916|Blcap|53619|bladder cancer associated protein homolog (human)
mm9_v1_chr8_-_85856284_85856386	2.62275	FOXN1.p2	AK041137|Elmod2|244548|ELMO domain containing 2	AK165222|Elmod2|244548|ELMO domain containing 2	AK036746|Elmod2|244548|ELMO domain containing 2	BC079654|Elmod2|244548|ELMO domain containing 2	AK029044|Elmod2|244548|ELMO domain containing 2	AK036607|Elmod2|244548|ELMO domain containing 2	AK084950|Elmod2|244548|ELMO domain containing 2	NM_001170691|Elmod2|244548|ELMO domain containing 2	NM_178736|Elmod2|244548|ELMO domain containing 2
mm9_v1_chr9_+_108241599_108241672	2.60619	FOXN1.p2	AK150548|Gpx1|14775|glutathione peroxidase 1	AK002245|Gpx1|14775|glutathione peroxidase 1	AK010999|Gpx1|14775|glutathione peroxidase 1	AK011019|Gpx1|14775|glutathione peroxidase 1	AK028171|Gpx1|14775|glutathione peroxidase 1	AK154833|Gpx1|14775|glutathione peroxidase 1	AK160388|Gpx1|14775|glutathione peroxidase 1	NM_008160|Gpx1|14775|glutathione peroxidase 1	BC086649|Gpx1|14775|glutathione peroxidase 1
mm9_v1_chr5_+_28492235_28492251	2.54546	FOXN1.p2	AK157766|En2|13799|engrailed 2	NM_010134|En2|13799|engrailed 2
mm9_v1_chr9_-_36954842_36954852	2.51117	FOXN1.p2	AK144270|Pknox2|208076|Pbx/knotted 1 homeobox 2	AK084178|Pknox2|208076|Pbx/knotted 1 homeobox 2	AK082952|Pknox2|208076|Pbx/knotted 1 homeobox 2	NM_001029838|Pknox2|208076|Pbx/knotted 1 homeobox 2
mm9_v1_chr6_-_47763309_47763428	2.51028	FOXN1.p2	AK168447|Pdia4|12304|protein disulfide isomerase associated 4	AK161534|Pdia4|12304|protein disulfide isomerase associated 4	AK146288|Pdia4|12304|protein disulfide isomerase associated 4	AK169387|Pdia4|12304|protein disulfide isomerase associated 4	AK028292|Pdia4|12304|protein disulfide isomerase associated 4	AK150566|Pdia4|12304|protein disulfide isomerase associated 4	J05186|Pdia4|12304|protein disulfide isomerase associated 4	BC141078|Pdia4|12304|protein disulfide isomerase associated 4	AK148801|Pdia4|12304|protein disulfide isomerase associated 4
mm9_v1_chr4_+_13670582_13670631	2.46855	FOXN1.p2	AK032132|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr2_+_174153230_174153414	2.45444	FOXN1.p2	AK020895|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF124383|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK086715|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC062654|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY682719|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr6_+_49772688_49772727	2.39644	FOXN1.p2	AK002982|Npy|109648|neuropeptide Y	BC043012|Npy|109648|neuropeptide Y	NM_023456|Npy|109648|neuropeptide Y
mm9_v1_chr2_+_32251776_32251794	2.34798	FOXN1.p2	BC004846|Ptges2|96979|prostaglandin E synthase 2	AK050616|Ptges2|96979|prostaglandin E synthase 2	AK002798|Ptges2|96979|prostaglandin E synthase 2
mm9_v1_chr11_+_103635438_103635563	2.33845	FOXN1.p2	AK132516|Wnt3|22415|wingless-related MMTV integration site 3	NM_009521|Wnt3|22415|wingless-related MMTV integration site 3	M32502|Wnt3|22415|wingless-related MMTV integration site 3	BC152305|Wnt3|22415|wingless-related MMTV integration site 3	BC152537|Wnt3|22415|wingless-related MMTV integration site 3	BC152304|Wnt3|22415|wingless-related MMTV integration site 3	AK141154|Wnt3|22415|wingless-related MMTV integration site 3	BC141271|Wnt3|22415|wingless-related MMTV integration site 3	BC141274|Wnt3|22415|wingless-related MMTV integration site 3
mm9_v1_chrX_+_96331434_96331470	2.33696	FOXN1.p2	AK034996|Efnb1|13641|ephrin B1	NM_010110|Efnb1|13641|ephrin B1
mm9_v1_chr10_-_116661519_116661571	2.31558	FOXN1.p2	AK012096|Yeats4|64050|YEATS domain containing 4	BC020043|Yeats4|64050|YEATS domain containing 4	AK081867|Yeats4|64050|YEATS domain containing 4	AK010522|Yeats4|64050|YEATS domain containing 4	NM_026570|Yeats4|64050|YEATS domain containing 4
mm9_v1_chr6_-_32538191_32538191	2.27101	FOXN1.p2	AB073228|Plxna4|243743|plexin A4	NM_175750|Plxna4|243743|plexin A4
mm9_v1_chr9_-_45792865_45792953	2.26991	FOXN1.p2	AK164573|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK012116|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	U57747|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK012164|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC003771|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	BC002037|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC056211|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK011326|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK153424|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	NM_008775|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm9_v1_chr11_+_52045464_52045596	2.23615	FOXN1.p2	NM_011543|Skp1a|21402|S-phase kinase-associated protein 1A	AK078330|Skp1a|21402|S-phase kinase-associated protein 1A	AK002983|Skp1a|21402|S-phase kinase-associated protein 1A	AK012498|Skp1a|21402|S-phase kinase-associated protein 1A	AK014245|Skp1a|21402|S-phase kinase-associated protein 1A	AK027909|Skp1a|21402|S-phase kinase-associated protein 1A	AK088339|Skp1a|21402|S-phase kinase-associated protein 1A	AK160198|Skp1a|21402|S-phase kinase-associated protein 1A	AK158209|Skp1a|21402|S-phase kinase-associated protein 1A	AK166673|Skp1a|21402|S-phase kinase-associated protein 1A	AK152609|Skp1a|21402|S-phase kinase-associated protein 1A	Z47088|Skp1a|21402|S-phase kinase-associated protein 1A	BC002115|Skp1a|21402|S-phase kinase-associated protein 1A	AF083214|Skp1a|21402|S-phase kinase-associated protein 1A
mm9_v1_chr17_-_25570112_25570251	2.22539	FOXN1.p2	AF334706|Cacna1h|58226|calcium channel, voltage-dependent, T type, alpha 1H subunit
mm9_v1_chr1_+_95651481_95651610	2.19124	FOXN1.p2	AK010949|Atg4b|66615|autophagy-related 4B (yeast)	AK088811|Atg4b|66615|autophagy-related 4B (yeast)	BC027184|Atg4b|66615|autophagy-related 4B (yeast)	AK028712|Atg4b|66615|autophagy-related 4B (yeast)	AK075796|Atg4b|66615|autophagy-related 4B (yeast)	AK031570|Atg4b|66615|autophagy-related 4B (yeast)	AK144239|Atg4b|66615|autophagy-related 4B (yeast)	NM_174874|Atg4b|66615|autophagy-related 4B (yeast)
mm9_v1_chr13_-_99086890_99086960	2.17313	FOXN1.p2	BC080837|Btf3|218490|basic transcription factor 3	BC008233|Btf3|218490|basic transcription factor 3	BC064010|Btf3|218490|basic transcription factor 3	NM_145455|Btf3|218490|basic transcription factor 3	AK160227|Btf3|218490|basic transcription factor 3	AK139664|Btf3|218490|basic transcription factor 3	AK147171|Btf3|218490|basic transcription factor 3	AK146332|Btf3|218490|basic transcription factor 3	NM_001170540|Btf3|218490|basic transcription factor 3
mm9_v1_chr11_-_60988419_60988468	2.17102	FOXN1.p2	BC080737|Usp22|216825|ubiquitin specific peptidase 22	AK160992|Usp22|216825|ubiquitin specific peptidase 22
mm9_v1_chr19_+_36908682_36908797	2.14176	FOXN1.p2	NM_001163635|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm9_v1_chr8_-_112217144_112217225	2.09832	FOXN1.p2	AK161899|2400003C14Rik|71955|RIKEN cDNA 2400003C14 gene	AK088192|2400003C14Rik|71955|RIKEN cDNA 2400003C14 gene	AK050468|2400003C14Rik|71955|RIKEN cDNA 2400003C14 gene	AK152830|2400003C14Rik|71955|RIKEN cDNA 2400003C14 gene	BC017605|2400003C14Rik|71955|RIKEN cDNA 2400003C14 gene	AK010262|2400003C14Rik|71955|RIKEN cDNA 2400003C14 gene	NM_028018|2400003C14Rik|71955|RIKEN cDNA 2400003C14 gene
mm9_v1_chr8_-_112217133_112217143	2.09183	FOXN1.p2	BC039052|2400003C14Rik|71955|RIKEN cDNA 2400003C14 gene
mm9_v1_chrX_-_137077133_137077229	2.09007	FOXN1.p2	AF201287|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr1_+_134212642_134212774	2.06285	FOXN1.p2	NM_001195025|Nuak2|74137|NUAK family, SNF1-like kinase, 2	NM_028778|Nuak2|74137|NUAK family, SNF1-like kinase, 2	AK034082|Nuak2|74137|NUAK family, SNF1-like kinase, 2	AK004737|Nuak2|74137|NUAK family, SNF1-like kinase, 2	AK033672|Nuak2|74137|NUAK family, SNF1-like kinase, 2	BC046833|Nuak2|74137|NUAK family, SNF1-like kinase, 2	BC033302|Nuak2|74137|NUAK family, SNF1-like kinase, 2
mm9_v1_chr16_-_37539763_37539874	2.06202	FOXN1.p2	AK080478|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK154283|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK031528|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK011543|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	NM_028812|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK084978|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	BC056966|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)
mm9_v1_chr14_+_25309938_25309954	2.0311	FOXN1.p2	AK002495|Rps24|20088|ribosomal protein S24	AK005358|Rps24|20088|ribosomal protein S24	AK007776|Rps24|20088|ribosomal protein S24	AK008386|Rps24|20088|ribosomal protein S24	AK009048|Rps24|20088|ribosomal protein S24	AK010856|Rps24|20088|ribosomal protein S24	AK018704|Rps24|20088|ribosomal protein S24	AK052480|Rps24|20088|ribosomal protein S24	BC086882|Rps24|20088|ribosomal protein S24	AK151111|Rps24|20088|ribosomal protein S24	AK049387|Rps24|20088|ribosomal protein S24	AK135247|Rps24|20088|ribosomal protein S24	AK012537|Rps24|20088|ribosomal protein S24	BC058817|Rps24|20088|ribosomal protein S24
mm9_v1_chr9_-_64585461_64585539	2.02436	FOXN1.p2	AK031143|Rab11a|53869|RAB11a, member RAS oncogene family
mm9_v1_chr8_-_97362140_97362260	2.00538	FOXN1.p2	AK088757|Ciapin1|109006|cytokine induced apoptosis inhibitor 1	BC021864|Ciapin1|109006|cytokine induced apoptosis inhibitor 1	AK146282|Ciapin1|109006|cytokine induced apoptosis inhibitor 1	AK168252|Ciapin1|109006|cytokine induced apoptosis inhibitor 1	AK076116|Ciapin1|109006|cytokine induced apoptosis inhibitor 1	AK079615|Ciapin1|109006|cytokine induced apoptosis inhibitor 1	AK163705|Ciapin1|109006|cytokine induced apoptosis inhibitor 1	AK136821|Ciapin1|109006|cytokine induced apoptosis inhibitor 1	NM_134141|Ciapin1|109006|cytokine induced apoptosis inhibitor 1
mm9_v1_chrX_+_98624989_98625073	1.99403	FOXN1.p2	NM_023144|Nono|53610|non-POU-domain-containing, octamer binding protein	AK161152|Nono|53610|non-POU-domain-containing, octamer binding protein	AK169303|Nono|53610|non-POU-domain-containing, octamer binding protein	AK145179|Nono|53610|non-POU-domain-containing, octamer binding protein	AK028338|Nono|53610|non-POU-domain-containing, octamer binding protein	AK004830|Nono|53610|non-POU-domain-containing, octamer binding protein	AK169202|Nono|53610|non-POU-domain-containing, octamer binding protein	AK165855|Nono|53610|non-POU-domain-containing, octamer binding protein	BC005465|Nono|53610|non-POU-domain-containing, octamer binding protein	S64860|Nono|53610|non-POU-domain-containing, octamer binding protein	AK167297|Nono|53610|non-POU-domain-containing, octamer binding protein	AK033201|Nono|53610|non-POU-domain-containing, octamer binding protein	AK013444|Nono|53610|non-POU-domain-containing, octamer binding protein
mm9_v1_chr4_-_120887671_120887722	1.99025	FOXN1.p2	AK132452|Rlf|109263|rearranged L-myc fusion sequence	AK045021|Rlf|109263|rearranged L-myc fusion sequence
mm9_v1_chr18_+_60685851_60685863	1.97647	FOXN1.p2	AK163240|Dctn4|67665|dynactin 4
mm9_v1_chr5_+_138220097_138220178	1.95729	FOXN1.p2	AK008148|2010007H12Rik|69871|RIKEN cDNA 2010007H12 gene	AK008184|2010007H12Rik|69871|RIKEN cDNA 2010007H12 gene	NM_027242|2010007H12Rik|69871|RIKEN cDNA 2010007H12 gene	BC052497|2010007H12Rik|69871|RIKEN cDNA 2010007H12 gene
mm9_v1_chr12_+_87423503_87423572	1.95009	FOXN1.p2	AK006115|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene	NM_029601|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene	BC038915|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene	BC034668|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene
mm9_v1_chr6_-_51419881_51419892	1.94707	FOXN1.p2	AK049771|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1	AK137214|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1	NM_016806|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1	NM_182650|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr8_+_28134259_28134401	1.92796	FOXN1.p2	BC036333|Erlin2|244373|ER lipid raft associated 2	AK030557|Erlin2|244373|ER lipid raft associated 2	BC038374|Erlin2|244373|ER lipid raft associated 2	NM_153592|Erlin2|244373|ER lipid raft associated 2
mm9_v1_chr18_+_10325174_10325177	1.89138	FOXN1.p2	AK142556|Greb1l|381157|growth regulation by estrogen in breast cancer-like	NM_001083628|Greb1l|381157|growth regulation by estrogen in breast cancer-like
mm9_v1_chr13_+_38296760_38296835	1.8858	FOXN1.p2	NM_026382|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK036713|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK012916|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK018315|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK087789|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK172155|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK007431|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	BC037073|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	BC021443|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)
mm9_v1_chr2_-_145760400_145760466	1.88219	FOXN1.p2	BC029187|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK004749|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	NM_025820|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK078271|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK088882|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK012962|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)	AK020002|Crnkl1|66877|Crn, crooked neck-like 1 (Drosophila)
mm9_v1_chr5_+_115751128_115751148	1.88001	FOXN1.p2	
mm9_v1_chr2_+_69699618_69699738	1.87175	FOXN1.p2	NM_001110145|Ssb|20823|Sjogren syndrome antigen B	NM_009278|Ssb|20823|Sjogren syndrome antigen B	AK088650|Ssb|20823|Sjogren syndrome antigen B	AK134864|Ssb|20823|Sjogren syndrome antigen B	AK168828|Ssb|20823|Sjogren syndrome antigen B	AK032940|Ssb|20823|Sjogren syndrome antigen B	AK017822|Ssb|20823|Sjogren syndrome antigen B	AK088370|Ssb|20823|Sjogren syndrome antigen B	AK088677|Ssb|20823|Sjogren syndrome antigen B	L00993|Ssb|20823|Sjogren syndrome antigen B	Y07951|Ssb|20823|Sjogren syndrome antigen B	AK141487|Ssb|20823|Sjogren syndrome antigen B	BC003820|Ssb|20823|Sjogren syndrome antigen B	BC106150|Ssb|20823|Sjogren syndrome antigen B
mm9_v1_chr19_-_14672472_14672537	1.86038	FOXN1.p2	AK017548|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	NM_011600|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr7_-_99889932_99889979	1.84367	FOXN1.p2	AK014157|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK051992|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK018467|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK019505|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084903|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084084|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK145781|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene
mm9_v1_chr9_+_54997159_54997206	1.82023	FOXN1.p2	AK042515|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	NM_180600|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	AK083216|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2
mm9_v1_chr19_+_41557168_41557205	1.78141	FOXN1.p2	AK077424|Lcor|212391|ligand dependent nuclear receptor corepressor	AB076079|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr17_-_30713158_30713239	1.77499	FOXN1.p2	AK153973|Btbd9|224671|BTB (POZ) domain containing 9	NM_027060|Btbd9|224671|BTB (POZ) domain containing 9	NM_172618|Btbd9|224671|BTB (POZ) domain containing 9
mm9_v1_chr2_-_125684720_125684819	1.76486	FOXN1.p2	AF071312|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	BC023096|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AF087688|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK145225|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK146153|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK132207|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK084421|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK010383|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK037757|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK132776|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	NM_009939|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm9_v1_chr3_+_151873407_151873495	1.74999	FOXN1.p2	AK028418|Fubp1|51886|far upstream element (FUSE) binding protein 1	NM_057172|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK167730|Fubp1|51886|far upstream element (FUSE) binding protein 1	BC023780|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK032517|Fubp1|51886|far upstream element (FUSE) binding protein 1	BC014763|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK029458|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK079204|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK138011|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK166066|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK160815|Fubp1|51886|far upstream element (FUSE) binding protein 1
mm9_v1_chr17_+_30713483_30713498	1.74482	FOXN1.p2	AK006324|0710001D07Rik|67679|RIKEN cDNA 0710001D07 gene
mm9_v1_chr1_+_129765349_129765386	1.73304	FOXN1.p2	NM_178690|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK172881|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK035603|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK076399|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK080432|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK134604|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK164523|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK170768|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	BC046297|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK076244|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1
mm9_v1_chr13_-_32430412_32430498	1.69417	FOXN1.p2	BC031788|Gmds|218138|GDP-mannose 4, 6-dehydratase	NM_146041|Gmds|218138|GDP-mannose 4, 6-dehydratase	BC093502|Gmds|218138|GDP-mannose 4, 6-dehydratase	AK086076|Gmds|218138|GDP-mannose 4, 6-dehydratase
mm9_v1_chr15_-_79604806_79604924	1.68989	FOXN1.p2	BC005426|Dnalc4|54152|dynein, axonemal, light chain 4	AK002657|Dnalc4|54152|dynein, axonemal, light chain 4	AB010031|Dnalc4|54152|dynein, axonemal, light chain 4	AK132061|Dnalc4|54152|dynein, axonemal, light chain 4	NM_017470|Dnalc4|54152|dynein, axonemal, light chain 4
mm9_v1_chr2_-_53937785_53937964	1.62775	FOXN1.p2	BC030065|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	AK014769|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	AB043586|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	AK010465|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	NM_023396|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate
mm9_v1_chr9_-_100446444_100446539	1.62027	FOXN1.p2	BC002015|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	NM_010878|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK051854|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr16_-_96303958_96304070	1.61906	FOXN1.p2	BC095940|Brwd1|93871|bromodomain and WD repeat domain containing 1	BC145265|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292467|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292468|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK030493|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_001103179|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_145125|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_176928|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK051870|Brwd1|93871|bromodomain and WD repeat domain containing 1
mm9_v1_chr1_-_156946739_156946767	1.61119	FOXN1.p2	BC051986|Ier5|15939|immediate early response 5	BC021013|Ier5|15939|immediate early response 5	BC037147|Ier5|15939|immediate early response 5	AK146609|Ier5|15939|immediate early response 5	AK150461|Ier5|15939|immediate early response 5	AF079527|Ier5|15939|immediate early response 5	NM_010500|Ier5|15939|immediate early response 5
mm9_v1_chr5_+_67999118_67999207	1.59473	FOXN1.p2	AK143290|Shisa3|330096|shisa homolog 3 (Xenopus laevis)	NM_001033415|Shisa3|330096|shisa homolog 3 (Xenopus laevis)	AK085772|Shisa3|330096|shisa homolog 3 (Xenopus laevis)
mm9_v1_chr19_+_46227039_46227050	1.57625	FOXN1.p2	BC076569|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	NM_178930|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chrX_+_45610055_45610110	1.57579	FOXN1.p2	AK134348|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	BC062165|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK165575|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK165628|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK012492|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	BC082590|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK134784|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AY316163|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK172924|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	NM_028276|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
mm9_v1_chr1_+_154802144_154802177	1.57452	FOXN1.p2	AK129155|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr9_-_44042043_44042131	1.56527	FOXN1.p2	BC125285|Cbl|12402|Casitas B-lineage lymphoma	X57111|Cbl|12402|Casitas B-lineage lymphoma	AK153915|Cbl|12402|Casitas B-lineage lymphoma	AK163907|Cbl|12402|Casitas B-lineage lymphoma	NM_007619|Cbl|12402|Casitas B-lineage lymphoma	AK029826|Cbl|12402|Casitas B-lineage lymphoma
mm9_v1_chr9_-_99469067_99469110	1.56363	FOXN1.p2	AK078280|Armc8|74125|armadillo repeat containing 8	AK083094|Armc8|74125|armadillo repeat containing 8
mm9_v1_chr11_-_65981945_65982052	1.55785	FOXN1.p2	AK082443|Dnahc9|237806|dynein, axonemal, heavy chain 9	AK030981|Dnahc9|237806|dynein, axonemal, heavy chain 9	AK044263|Dnahc9|237806|dynein, axonemal, heavy chain 9	NM_001099633|Dnahc9|237806|dynein, axonemal, heavy chain 9
mm9_v1_chr14_+_32064678_32064794	1.5474	FOXN1.p2	BC050901|Bap1|104416|Brca1 associated protein 1	BC042489|Bap1|104416|Brca1 associated protein 1	AK129108|Bap1|104416|Brca1 associated protein 1	AB047820|Bap1|104416|Brca1 associated protein 1
mm9_v1_chr11_+_84339151_84339188	1.53582	FOXN1.p2	AK018772|1500016L03Rik|78365|RIKEN cDNA 1500016L03 gene
mm9_v1_chr18_-_38094995_38095137	1.52466	FOXN1.p2	AK140734|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK220466|Diap1|13367|diaphanous homolog 1 (Drosophila)	NM_007858|Diap1|13367|diaphanous homolog 1 (Drosophila)	U96963|Diap1|13367|diaphanous homolog 1 (Drosophila)	BC070412|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK012707|Diap1|13367|diaphanous homolog 1 (Drosophila)
mm9_v1_chr10_-_116018526_116018566	1.52033	FOXN1.p2	AK149767|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	BC043133|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK167834|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK202363|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK172132|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	BC063105|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK078121|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK011231|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	BC065171|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_001037846|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_001037847|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_001037848|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_028082|Cnot2|72068|CCR4-NOT transcription complex, subunit 2
mm9_v1_chr14_+_99499149_99499178	1.4911	FOXN1.p2	AK045133|Pibf1|52023|progesterone immunomodulatory binding factor 1	AK030385|Pibf1|52023|progesterone immunomodulatory binding factor 1	BC113804|Pibf1|52023|progesterone immunomodulatory binding factor 1	BC129811|Pibf1|52023|progesterone immunomodulatory binding factor 1	BC129812|Pibf1|52023|progesterone immunomodulatory binding factor 1	AK050974|Pibf1|52023|progesterone immunomodulatory binding factor 1	AK015781|Pibf1|52023|progesterone immunomodulatory binding factor 1
mm9_v1_chr2_+_19367264_19367426	1.48612	FOXN1.p2	AK007922|Ptf1a|19213|pancreas specific transcription factor, 1a	AB035675|Ptf1a|19213|pancreas specific transcription factor, 1a	NM_018809|Ptf1a|19213|pancreas specific transcription factor, 1a	BC132505|Ptf1a|19213|pancreas specific transcription factor, 1a	BC138507|Ptf1a|19213|pancreas specific transcription factor, 1a
mm9_v1_chr11_+_69154265_69154342	1.45401	FOXN1.p2	AK002962|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	AK045471|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	AB041807|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	BC021519|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene
mm9_v1_chr5_+_73305509_73305751	1.45266	FOXN1.p2	NM_001113423|Slain2|75991|SLAIN motif family, member 2	NM_153567|Slain2|75991|SLAIN motif family, member 2	AK146432|Slain2|75991|SLAIN motif family, member 2	AK129365|Slain2|75991|SLAIN motif family, member 2	BC010836|Slain2|75991|SLAIN motif family, member 2	AK033137|Slain2|75991|SLAIN motif family, member 2	AK039970|Slain2|75991|SLAIN motif family, member 2	BC076573|Slain2|75991|SLAIN motif family, member 2
mm9_v1_chr19_+_3768145_3768217	1.40019	FOXN1.p2	BC011214|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK139255|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	BC075709|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK152179|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm9_v1_chr7_-_89079168_89079313	1.377	FOXN1.p2	AK014849|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK044858|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK051401|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK135495|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr9_+_21397165_21397375	1.37542	FOXN1.p2	BC057071|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	NM_178619|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK030602|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK028799|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene
mm9_v1_chr4_-_136604609_136604715	1.37364	FOXN1.p2	BC059177|Zbtb40|230848|zinc finger and BTB domain containing 40	NM_198248|Zbtb40|230848|zinc finger and BTB domain containing 40	AK036584|Zbtb40|230848|zinc finger and BTB domain containing 40
mm9_v1_chr13_+_77274778_77274859	1.36839	FOXN1.p2	NM_001081353|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	NM_001145676|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	AK165312|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	AK050886|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	AK008859|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	BC089469|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	BC151066|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	BC157949|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	AK143619|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene
mm9_v1_chr3_+_102824539_102824560	1.36095	FOXN1.p2	AK154068|Csde1|229663|cold shock domain containing E1, RNA binding	AK155751|Csde1|229663|cold shock domain containing E1, RNA binding	AK145428|Csde1|229663|cold shock domain containing E1, RNA binding	AK145932|Csde1|229663|cold shock domain containing E1, RNA binding	AK150882|Csde1|229663|cold shock domain containing E1, RNA binding	AK153196|Csde1|229663|cold shock domain containing E1, RNA binding	BC062097|Csde1|229663|cold shock domain containing E1, RNA binding	AK122393|Csde1|229663|cold shock domain containing E1, RNA binding	AK189439|Csde1|229663|cold shock domain containing E1, RNA binding	BC031404|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr13_+_55565627_55565671	1.35999	FOXN1.p2	NM_001030296|Prr7|432763|proline rich 7 (synaptic)	AK133129|Prr7|432763|proline rich 7 (synaptic)
mm9_v1_chr14_-_80171003_80171120	1.35715	FOXN1.p2	AK140407|Pcdh8|18530|protocadherin 8	AF231125|Pcdh8|18530|protocadherin 8	BC052388|Pcdh8|18530|protocadherin 8	BC053008|Pcdh8|18530|protocadherin 8	AK048638|Pcdh8|18530|protocadherin 8	AK049982|Pcdh8|18530|protocadherin 8	NM_001042726|Pcdh8|18530|protocadherin 8	NM_021543|Pcdh8|18530|protocadherin 8
mm9_v1_chr19_-_14672540_14672588	1.34818	FOXN1.p2	AK134989|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	BC086631|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr3_+_79395280_79395367	1.34358	FOXN1.p2	AK150520|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK151091|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	BC019778|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	NM_026352|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	BC011499|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK016221|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK013919|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK051597|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK003402|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)
mm9_v1_chr9_+_72510153_72510370	1.34246	FOXN1.p2	D85414|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	NM_010890|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK088767|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK133838|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK144240|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK169582|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK088620|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	BC138813|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK050517|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK080349|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK160570|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK122203|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	BC080710|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr11_-_100259061_100259098	1.33287	FOXN1.p2	AK170934|Jup|16480|junction plakoglobin	AK171501|Jup|16480|junction plakoglobin	AK145895|Jup|16480|junction plakoglobin
mm9_v1_chrX_-_137077639_137077729	1.32954	FOXN1.p2	BC028813|Tsc22d3|14605|TSC22 domain family, member 3	AF201288|Tsc22d3|14605|TSC22 domain family, member 3	AF024519|Tsc22d3|14605|TSC22 domain family, member 3	AK083389|Tsc22d3|14605|TSC22 domain family, member 3	NM_010286|Tsc22d3|14605|TSC22 domain family, member 3	AK144196|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr3_+_82162091_82162153	1.32411	FOXN1.p2	AK135823|Mtap9|213582|microtubule-associated protein 9	BC087935|Mtap9|213582|microtubule-associated protein 9	AK147287|Mtap9|213582|microtubule-associated protein 9	AK147416|Mtap9|213582|microtubule-associated protein 9	BC061216|Mtap9|213582|microtubule-associated protein 9	AK030527|Mtap9|213582|microtubule-associated protein 9
mm9_v1_chr15_-_38008565_38008625	1.3182	FOXN1.p2	NM_001081359|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5	NM_001112721|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5
mm9_v1_chrX_-_130432840_130432967	1.31378	FOXN1.p2	AK160313|Tspan6|56496|tetraspanin 6	AK167384|Tspan6|56496|tetraspanin 6	AK146673|Tspan6|56496|tetraspanin 6	AK149204|Tspan6|56496|tetraspanin 6	BC110314|Tspan6|56496|tetraspanin 6	BC003733|Tspan6|56496|tetraspanin 6	NM_019656|Tspan6|56496|tetraspanin 6
mm9_v1_chr7_+_134614507_134614614	1.3137	FOXN1.p2	AK151203|Prr14|233895|proline rich 14	AK145816|Prr14|233895|proline rich 14	AK139559|Prr14|233895|proline rich 14
mm9_v1_chr13_-_64376186_64376295	1.30915	FOXN1.p2	BC057357|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	BC049794|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	AK161345|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_172587|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
mm9_v1_chr11_-_50024275_50024312	1.30552	FOXN1.p2	U57413|Sqstm1|18412|sequestosome 1	NM_011018|Sqstm1|18412|sequestosome 1	U40930|Sqstm1|18412|sequestosome 1
mm9_v1_chr11_+_3190781_3190835	1.30181	FOXN1.p2	AK217423|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr5_-_139060905_139060950	1.29903	FOXN1.p2	AK153887|Zfp68|24135|zinc finger protein 68	AK146092|Zfp68|24135|zinc finger protein 68	AK044831|Zfp68|24135|zinc finger protein 68
mm9_v1_chr18_-_46685557_46685627	1.29889	FOXN1.p2	AK129440|Fem1c|240263|fem-1 homolog c (C.elegans)	AK049336|Fem1c|240263|fem-1 homolog c (C.elegans)	AK028330|Fem1c|240263|fem-1 homolog c (C.elegans)	NM_173423|Fem1c|240263|fem-1 homolog c (C.elegans)
mm9_v1_chr18_+_60685866_60685974	1.29628	FOXN1.p2	AK162552|Dctn4|67665|dynactin 4	AK168484|Dctn4|67665|dynactin 4	AK160813|Dctn4|67665|dynactin 4	AK050896|Dctn4|67665|dynactin 4	AK019382|Dctn4|67665|dynactin 4	BC034725|Dctn4|67665|dynactin 4	NM_026302|Dctn4|67665|dynactin 4	AK141855|Dctn4|67665|dynactin 4	AK003238|Dctn4|67665|dynactin 4	AK089264|Dctn4|67665|dynactin 4	BC006677|Dctn4|67665|dynactin 4	AK177969|Dctn4|67665|dynactin 4	AK197489|Dctn4|67665|dynactin 4
mm9_v1_chr9_-_113935832_113935880	1.29193	FOXN1.p2	AK013142|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK089994|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145665|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145998|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK045742|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC096582|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK141177|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK163472|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK044693|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK039010|Fbxl2|72179|F-box and leucine-rich repeat protein 2	NM_178624|Fbxl2|72179|F-box and leucine-rich repeat protein 2
mm9_v1_chr8_+_63471991_63472061	1.29171	FOXN1.p2	AK173292|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AY850065|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	NM_175089|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK077047|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK045202|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC070443|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC157939|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC158009|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC172091|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1
mm9_v1_chr9_-_37240759_37240759	1.27983	FOXN1.p2	NM_001164767|Robo3|19649|roundabout homolog 3 (Drosophila)
mm9_v1_chr14_+_17197678_17197719	1.26841	FOXN1.p2	AK087535|Top2b|21974|topoisomerase (DNA) II beta	AK163043|Top2b|21974|topoisomerase (DNA) II beta	AK041054|Top2b|21974|topoisomerase (DNA) II beta	BC041106|Top2b|21974|topoisomerase (DNA) II beta	BC054541|Top2b|21974|topoisomerase (DNA) II beta	NM_009409|Top2b|21974|topoisomerase (DNA) II beta
mm9_v1_chr9_-_35365985_35366129	1.25612	FOXN1.p2	AF142630|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	BC024852|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	BC061130|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	AK078340|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	AK050693|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25	NM_013932|Ddx25|30959|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25
mm9_v1_chr6_+_6906000_6906017	1.25462	FOXN1.p2	AK046436|Acn9|71238|ACN9 homolog (S. cerevisiae)	AK016986|Acn9|71238|ACN9 homolog (S. cerevisiae)	BC061217|Acn9|71238|ACN9 homolog (S. cerevisiae)	BC118928|Acn9|71238|ACN9 homolog (S. cerevisiae)	BC118927|Acn9|71238|ACN9 homolog (S. cerevisiae)	NM_001077713|Acn9|71238|ACN9 homolog (S. cerevisiae)
mm9_v1_chr5_-_102498929_102498975	1.25312	FOXN1.p2	AK047077|Wdfy3|72145|WD repeat and FYVE domain containing 3	AY336569|Wdfy3|72145|WD repeat and FYVE domain containing 3	NM_172882|Wdfy3|72145|WD repeat and FYVE domain containing 3
mm9_v1_chr3_-_14611236_14611288	1.25184	FOXN1.p2	BC100488|1810022K09Rik|69126|RIKEN cDNA 1810022K09 gene	BC045157|1810022K09Rik|69126|RIKEN cDNA 1810022K09 gene	BC055766|1810022K09Rik|69126|RIKEN cDNA 1810022K09 gene	BC083104|1810022K09Rik|69126|RIKEN cDNA 1810022K09 gene	BC100487|1810022K09Rik|69126|RIKEN cDNA 1810022K09 gene	AK007585|1810022K09Rik|69126|RIKEN cDNA 1810022K09 gene	NM_001099674|1810022K09Rik|69126|RIKEN cDNA 1810022K09 gene
mm9_v1_chr19_+_46227031_46227037	1.23692	FOXN1.p2	AK143358|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr2_-_28438708_28438725	1.23599	FOXN1.p2	BC027247|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	BC039171|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr2_+_152561983_152562076	1.23333	FOXN1.p2	M31885|Id1|15901|inhibitor of DNA binding 1	AK008264|Id1|15901|inhibitor of DNA binding 1	BC025073|Id1|15901|inhibitor of DNA binding 1	NM_010495|Id1|15901|inhibitor of DNA binding 1	U43884|Id1|15901|inhibitor of DNA binding 1	AB221668|Id1|15901|inhibitor of DNA binding 1	CT010243|Id1|15901|inhibitor of DNA binding 1
mm9_v1_chr14_-_119324535_119324628	1.22914	FOXN1.p2	AK141247|Dzip1|66573|DAZ interacting protein 1	BC098211|Dzip1|66573|DAZ interacting protein 1
mm9_v1_chr3_-_104315750_104315755	1.2164	FOXN1.p2	AK173030|Lrig2|269473|leucine-rich repeats and immunoglobulin-like domains 2
mm9_v1_chr1_+_168184269_168184413	1.21121	FOXN1.p2	NM_001164528|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024494|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024495|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024496|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024497|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024498|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024499|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024500|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024501|Ildr2|100039795|immunoglobulin-like domain containing receptor 2
mm9_v1_chr9_+_20385734_20385771	1.19674	FOXN1.p2	NM_172919|Zfp846|244721|zinc finger protein 846
mm9_v1_chr1_-_65225583_65225732	1.19564	FOXN1.p2	AK087063|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK151212|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK149019|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK159173|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK160896|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK167583|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK167158|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK168832|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	BC088986|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	NM_010497|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble
mm9_v1_chr2_-_130665832_130665882	1.19427	FOXN1.p2	BC052447|4930402H24Rik|228602|RIKEN cDNA 4930402H24 gene	NM_029432|4930402H24Rik|228602|RIKEN cDNA 4930402H24 gene	AK015050|4930402H24Rik|228602|RIKEN cDNA 4930402H24 gene	AK158367|4930402H24Rik|228602|RIKEN cDNA 4930402H24 gene	AK089462|4930402H24Rik|228602|RIKEN cDNA 4930402H24 gene	AK143611|4930402H24Rik|228602|RIKEN cDNA 4930402H24 gene	AK045996|4930402H24Rik|228602|RIKEN cDNA 4930402H24 gene
mm9_v1_chr1_+_59969845_59969868	1.19172	FOXN1.p2	AK154812|Fam117b|72750|family with sequence similarity 117, member B	NM_001037725|Fam117b|72750|family with sequence similarity 117, member B
mm9_v1_chr2_+_181231870_181232009	1.19112	FOXN1.p2	AK171825|Tpd52l2|66314|tumor protein D52-like 2	AK147885|Tpd52l2|66314|tumor protein D52-like 2	AK161092|Tpd52l2|66314|tumor protein D52-like 2	AK013188|Tpd52l2|66314|tumor protein D52-like 2	AK051268|Tpd52l2|66314|tumor protein D52-like 2	AK160727|Tpd52l2|66314|tumor protein D52-like 2	AK013085|Tpd52l2|66314|tumor protein D52-like 2	AK155987|Tpd52l2|66314|tumor protein D52-like 2	AK159925|Tpd52l2|66314|tumor protein D52-like 2	BC006886|Tpd52l2|66314|tumor protein D52-like 2	NM_025482|Tpd52l2|66314|tumor protein D52-like 2
mm9_v1_chr5_+_77380665_77380712	1.1871	FOXN1.p2	AK012118|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm9_v1_chr6_-_30846696_30846797	1.17711	FOXN1.p2	AF205065|Copg2|54160|coatomer protein complex, subunit gamma 2	AK079599|Copg2|54160|coatomer protein complex, subunit gamma 2	AK178636|Copg2|54160|coatomer protein complex, subunit gamma 2	AK186993|Copg2|54160|coatomer protein complex, subunit gamma 2	AK149462|Copg2|54160|coatomer protein complex, subunit gamma 2	BC145898|Copg2|54160|coatomer protein complex, subunit gamma 2	BC145900|Copg2|54160|coatomer protein complex, subunit gamma 2	AK147943|Copg2|54160|coatomer protein complex, subunit gamma 2	BC049178|Copg2|54160|coatomer protein complex, subunit gamma 2	NM_017478|Copg2|54160|coatomer protein complex, subunit gamma 2	AK163668|Copg2|54160|coatomer protein complex, subunit gamma 2	AJ251067|Copg2|54160|coatomer protein complex, subunit gamma 2	AK088492|Copg2|54160|coatomer protein complex, subunit gamma 2
mm9_v1_chr7_+_107520844_107520880	1.17525	FOXN1.p2	AK148365|C2cd3|277939|C2 calcium-dependent domain containing 3
mm9_v1_chr5_+_147042806_147042851	1.16915	FOXN1.p2	AK131948|Cdk8|264064|cyclin-dependent kinase 8
mm9_v1_chr2_-_56967331_56967448	1.16904	FOXN1.p2	S53744|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2	AK158607|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2	NM_013613|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2
mm9_v1_chr17_+_35031503_35031575	1.16597	FOXN1.p2	BC062159|Zbtb12|193736|zinc finger and BTB domain containing 12	NM_198886|Zbtb12|193736|zinc finger and BTB domain containing 12	BC020447|Zbtb12|193736|zinc finger and BTB domain containing 12
mm9_v1_chr1_-_84281164_84281254	1.16411	FOXN1.p2	BC080290|Pid1|98496|phosphotyrosine interaction domain containing 1	AK164328|Pid1|98496|phosphotyrosine interaction domain containing 1	AK151267|Pid1|98496|phosphotyrosine interaction domain containing 1	AK163691|Pid1|98496|phosphotyrosine interaction domain containing 1	NM_001003948|Pid1|98496|phosphotyrosine interaction domain containing 1
mm9_v1_chr13_+_55724400_55724442	1.15707	FOXN1.p2	U21960|Caml|12328|calcium modulating ligand	BC005688|Caml|12328|calcium modulating ligand
mm9_v1_chr8_-_41596638_41596711	1.15662	FOXN1.p2	AK044535|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	NM_011135|Cnot7|18983|CCR4-NOT transcription complex, subunit 7
mm9_v1_chr11_+_30671734_30671781	1.15364	FOXN1.p2	NM_134013|Psme4|103554|proteasome (prosome, macropain) activator subunit 4
mm9_v1_chr9_+_70055127_70055237	1.14439	FOXN1.p2	AK009155|Myo1e|71602|myosin IE	AK009427|Myo1e|71602|myosin IE	AK029145|Myo1e|71602|myosin IE	NM_181072|Myo1e|71602|myosin IE	BC040786|Myo1e|71602|myosin IE	BC051391|Myo1e|71602|myosin IE
mm9_v1_chr8_+_124474484_124474529	1.14133	FOXN1.p2	BC021650|Banp|53325|BTG3 associated nuclear protein	BC022168|Banp|53325|BTG3 associated nuclear protein	AK154088|Banp|53325|BTG3 associated nuclear protein
mm9_v1_chr8_+_41597112_41597221	1.13912	FOXN1.p2	AK171221|Vps37a|52348|vacuolar protein sorting 37A (yeast)	NM_033560|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK170961|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK171055|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK137479|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK016385|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK048942|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK054055|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK170280|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK157507|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK170943|Vps37a|52348|vacuolar protein sorting 37A (yeast)	BC039290|Vps37a|52348|vacuolar protein sorting 37A (yeast)	BC110396|Vps37a|52348|vacuolar protein sorting 37A (yeast)
mm9_v1_chr16_-_96304116_96304132	1.13171	FOXN1.p2	BC056618|Brwd1|93871|bromodomain and WD repeat domain containing 1
mm9_v1_chr11_+_29273673_29273774	1.1234	FOXN1.p2	AK051140|Ccdc88a|108686|coiled coil domain containing 88A	NM_176841|Ccdc88a|108686|coiled coil domain containing 88A
mm9_v1_chr17_+_6106857_6106857	1.10605	FOXN1.p2	AK043826|Tulp4|68842|tubby like protein 4	AK084820|Tulp4|68842|tubby like protein 4
mm9_v1_chr1_-_84281018_84281160	1.10134	FOXN1.p2	AK035542|Pid1|98496|phosphotyrosine interaction domain containing 1	AK083256|Pid1|98496|phosphotyrosine interaction domain containing 1	AK150971|Pid1|98496|phosphotyrosine interaction domain containing 1
mm9_v1_chr2_+_75497282_75497379	1.09584	FOXN1.p2	NM_053263|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	NM_146130|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	NM_198090|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AK133860|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AK010481|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC038364|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AK169663|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AB201711|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC057655|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC062198|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AF463524|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC116250|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC116251|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC157904|Gm6793|627828|heterogeneous nuclear ribonucleoprotein A3 pseudogene	BC157919|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC158038|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC158074|Gm6793|627828|heterogeneous nuclear ribonucleoprotein A3 pseudogene	BC172011|Gm6793|627828|heterogeneous nuclear ribonucleoprotein A3 pseudogene	BC023908|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC064824|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3
mm9_v1_chr4_+_94281210_94281261	1.09432	FOXN1.p2	NM_026319|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC005798|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK014770|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK011690|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK053369|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC023760|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC049156|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)
mm9_v1_chr5_+_123844794_123844938	1.09289	FOXN1.p2	AK047475|Mlxip|208104|MLX interacting protein	NM_133917|Mlxip|208104|MLX interacting protein	NM_177582|Mlxip|208104|MLX interacting protein	BC137770|Mlxip|208104|MLX interacting protein	AY968204|Mlxip|208104|MLX interacting protein
mm9_v1_chr12_-_99812921_99812948	1.08227	FOXN1.p2	AK019376|Kcnk10|72258|potassium channel, subfamily K, member 10
mm9_v1_chr2_-_74497475_74497613	1.08201	FOXN1.p2	M93128|Evx2|14029|even skipped homeotic gene 2 homolog	NM_007967|Evx2|14029|even skipped homeotic gene 2 homolog	BC061467|Evx2|14029|even skipped homeotic gene 2 homolog
mm9_v1_chr8_+_124474432_124474469	1.06582	FOXN1.p2	NM_001110100|Banp|53325|BTG3 associated nuclear protein	NM_016812|Banp|53325|BTG3 associated nuclear protein	BC062641|Banp|53325|BTG3 associated nuclear protein
mm9_v1_chrX_-_11657678_11657678	1.06377	FOXN1.p2	AK053309|Bcor|71458|BCL6 interacting corepressor	NM_029510|Bcor|71458|BCL6 interacting corepressor	NM_175044|Bcor|71458|BCL6 interacting corepressor	NM_175045|Bcor|71458|BCL6 interacting corepressor	NM_175046|Bcor|71458|BCL6 interacting corepressor
mm9_v1_chr13_+_48356487_48356596	1.06139	FOXN1.p2	AK041164|Id4|15904|inhibitor of DNA binding 4
mm9_v1_chr8_+_124114323_124114400	1.05629	FOXN1.p2	AF255953|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK132329|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC068180|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK002795|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003558|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK012604|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003106|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003205|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	NM_026160|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK151614|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC028812|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC110308|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC086774|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta
mm9_v1_chr19_+_54019308_54019391	1.05566	FOXN1.p2	NM_019658|Shoc2|56392|soc-2 (suppressor of clear) homolog (C. elegans)	AK146447|Shoc2|56392|soc-2 (suppressor of clear) homolog (C. elegans)
mm9_v1_chr10_-_116813919_116814033	1.05505	FOXN1.p2	AK048615|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK046856|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK168764|Cpsf6|432508|cleavage and polyadenylation specific factor 6	BC068133|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK049749|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK077684|Cpsf6|432508|cleavage and polyadenylation specific factor 6	NM_001013391|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr2_+_181599126_181599193	1.04216	FOXN1.p2	AK010875|Polr3k|67005|polymerase (RNA) III (DNA directed) polypeptide K	AK021353|Polr3k|67005|polymerase (RNA) III (DNA directed) polypeptide K	AK031110|Polr3k|67005|polymerase (RNA) III (DNA directed) polypeptide K	AK005152|Polr3k|67005|polymerase (RNA) III (DNA directed) polypeptide K	AK088206|Polr3k|67005|polymerase (RNA) III (DNA directed) polypeptide K	AK008637|Polr3k|67005|polymerase (RNA) III (DNA directed) polypeptide K
mm9_v1_chr5_-_145952388_145952448	1.0277	FOXN1.p2	BC029226|Atp5j2|57423|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2	AK003235|Atp5j2|57423|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2	AK151737|Atp5j2|57423|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2	AK002519|Atp5j2|57423|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2	AK003817|Atp5j2|57423|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2	AK013130|Atp5j2|57423|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2	AK168095|Atp5j2|57423|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
mm9_v1_chr13_+_55724355_55724380	1.02711	FOXN1.p2	AK002895|Caml|12328|calcium modulating ligand	NM_007596|Caml|12328|calcium modulating ligand
mm9_v1_chr13_+_81922236_81922300	1.02606	FOXN1.p2	AK017505|Cetn3|12626|centrin 3	BC002162|Cetn3|12626|centrin 3	BC054097|Cetn3|12626|centrin 3	AK003473|Cetn3|12626|centrin 3	AK006289|Cetn3|12626|centrin 3	AK004532|Cetn3|12626|centrin 3	AK006891|Cetn3|12626|centrin 3	NM_007684|Cetn3|12626|centrin 3	AK011821|Cetn3|12626|centrin 3
mm9_v1_chr8_-_114516147_114516201	1.02584	FOXN1.p2	BC019976|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK039699|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK161044|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK035614|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK082399|Adat1|30947|adenosine deaminase, tRNA-specific 1	NM_013925|Adat1|30947|adenosine deaminase, tRNA-specific 1
mm9_v1_chr9_-_58402890_58402948	1.02148	FOXN1.p2	AK155114|Cd276|102657|CD276 antigen	DQ832276|Cd276|102657|CD276 antigen
mm9_v1_chr2_-_5863788_5863851	1.01963	FOXN1.p2	BC117994|Dhtkd1|209692|dehydrogenase E1 and transketolase domain containing 1	AK049272|Dhtkd1|209692|dehydrogenase E1 and transketolase domain containing 1	NM_001081131|Dhtkd1|209692|dehydrogenase E1 and transketolase domain containing 1
mm9_v1_chr17_+_78599556_78599594	1.0192	FOXN1.p2	NM_015800|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr1_+_154802091_154802137	1.01908	FOXN1.p2	AK084041|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	AK083532|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr13_-_77274698_77274775	1.01877	FOXN1.p2	AK047775|Ankrd32|105377|ankyrin repeat domain 32	BC100362|Ankrd32|105377|ankyrin repeat domain 32	BC061188|Ankrd32|105377|ankyrin repeat domain 32	AK012253|Ankrd32|105377|ankyrin repeat domain 32	AK089501|Ankrd32|105377|ankyrin repeat domain 32	AK171473|Ankrd32|105377|ankyrin repeat domain 32	NM_134071|Ankrd32|105377|ankyrin repeat domain 32
mm9_v1_chr5_-_84846256_84846332	1.0186	FOXN1.p2	AK089143|Epha5|13839|Eph receptor A5
mm9_v1_chr3_-_90313339_90313430	1.01416	FOXN1.p2	AK004558|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	NM_023215|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	AB041654|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	AK152492|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	BC066837|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	BC051939|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	AK005377|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	AK047914|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	AK132769|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	AK135914|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	AK010866|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene	AK077960|2500003M10Rik|66511|RIKEN cDNA 2500003M10 gene
mm9_v1_chr5_+_110973321_110973404	1.00274	FOXN1.p2	NM_198306|Galnt9|231605|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9	AK032568|Galnt9|231605|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9
mm9_v1_chr4_+_147314951_147315041	1.0002	FOXN1.p2	AK011059|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK153761|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	NM_029841|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	BC012878|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK173332|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene
mm9_v1_chr12_-_40763924_40763965	0.998929	FOXN1.p2	BC029234|Arl4a|11861|ADP-ribosylation factor-like 4A	BC003725|Arl4a|11861|ADP-ribosylation factor-like 4A	AK168618|Arl4a|11861|ADP-ribosylation factor-like 4A	AK048606|Arl4a|11861|ADP-ribosylation factor-like 4A	AK137751|Arl4a|11861|ADP-ribosylation factor-like 4A	NM_007487|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr11_+_3190334_3190510	0.997108	FOXN1.p2	AK166189|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	BC043035|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	AB029397|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	NM_019574|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr14_+_76245136_76245138	0.992896	FOXN1.p2	AK149695|Tpt1|22070|tumor protein, translationally-controlled 1	AK150500|Tpt1|22070|tumor protein, translationally-controlled 1	AK151266|Tpt1|22070|tumor protein, translationally-controlled 1	AK151375|Tpt1|22070|tumor protein, translationally-controlled 1	AK151894|Tpt1|22070|tumor protein, translationally-controlled 1	AK152690|Tpt1|22070|tumor protein, translationally-controlled 1	AK159516|Tpt1|22070|tumor protein, translationally-controlled 1	AK165736|Tpt1|22070|tumor protein, translationally-controlled 1	AK167413|Tpt1|22070|tumor protein, translationally-controlled 1	AK167936|Tpt1|22070|tumor protein, translationally-controlled 1	AK168151|Tpt1|22070|tumor protein, translationally-controlled 1	AK150300|Tpt1|22070|tumor protein, translationally-controlled 1	AK150858|Tpt1|22070|tumor protein, translationally-controlled 1	AK151059|Tpt1|22070|tumor protein, translationally-controlled 1	AK152808|Tpt1|22070|tumor protein, translationally-controlled 1	AK159565|Tpt1|22070|tumor protein, translationally-controlled 1	X06407|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr16_-_26105869_26105946	0.992832	FOXN1.p2	AJ430350|Leprel1|210530|leprecan-like 1	NM_173379|Leprel1|210530|leprecan-like 1
mm9_v1_chr6_+_6906033_6906087	0.986904	FOXN1.p2	AK002229|Acn9|71238|ACN9 homolog (S. cerevisiae)	AK028031|Acn9|71238|ACN9 homolog (S. cerevisiae)	AK004417|Acn9|71238|ACN9 homolog (S. cerevisiae)
mm9_v1_chr2_-_167457476_167457545	0.985931	FOXN1.p2	AK012021|Ube2v1|66589|ubiquitin-conjugating enzyme E2 variant 1	BC003449|Ube2v1|66589|ubiquitin-conjugating enzyme E2 variant 1	AK158230|Ube2v1|66589|ubiquitin-conjugating enzyme E2 variant 1	NM_023230|Ube2v1|66589|ubiquitin-conjugating enzyme E2 variant 1
mm9_v1_chr2_-_29904342_29904416	0.979449	FOXN1.p2	BC085113|Wdr34|71820|WD repeat domain 34	AK014304|Wdr34|71820|WD repeat domain 34	NM_001008498|Wdr34|71820|WD repeat domain 34
mm9_v1_chr11_+_74644479_74644499	0.976242	FOXN1.p2	Y07609|Mnt|17428|max binding protein	BC054534|Mnt|17428|max binding protein
mm9_v1_chr1_+_89652645_89652774	0.970369	FOXN1.p2	AK030983|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	NM_029846|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK145673|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK155358|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK163246|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK170073|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	BC049122|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK048873|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK005181|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087879|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087880|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087881|Atg16l1|77040|autophagy-related 16-like 1 (yeast)
mm9_v1_chr3_-_104315778_104315782	0.966186	FOXN1.p2	AK036116|Lrig2|269473|leucine-rich repeats and immunoglobulin-like domains 2	NM_001025067|Lrig2|269473|leucine-rich repeats and immunoglobulin-like domains 2
mm9_v1_chr16_+_58408609_58408667	0.957429	FOXN1.p2	BC066097|Dcbld2|73379|discoidin, CUB and LCCL domain containing 2	NM_028523|Dcbld2|73379|discoidin, CUB and LCCL domain containing 2
mm9_v1_chr5_-_125029032_125029085	0.956894	FOXN1.p2	BC003426|Eif2b1|209354|eukaryotic translation initiation factor 2B, subunit 1 (alpha)	AK088066|Eif2b1|209354|eukaryotic translation initiation factor 2B, subunit 1 (alpha)	AK133695|Eif2b1|209354|eukaryotic translation initiation factor 2B, subunit 1 (alpha)	NM_145371|Eif2b1|209354|eukaryotic translation initiation factor 2B, subunit 1 (alpha)
mm9_v1_chr19_+_41557126_41557136	0.952174	FOXN1.p2	AK155007|Lcor|212391|ligand dependent nuclear receptor corepressor	BC099938|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr18_-_46685512_46685538	0.950999	FOXN1.p2	AK147729|Fem1c|240263|fem-1 homolog c (C.elegans)
mm9_v1_chr17_-_80461511_80461673	0.947435	FOXN1.p2	AK160943|Hnrpll|72692|heterogeneous nuclear ribonucleoprotein L-like	BC012849|Hnrpll|72692|heterogeneous nuclear ribonucleoprotein L-like	AK034860|Hnrpll|72692|heterogeneous nuclear ribonucleoprotein L-like	AK146879|Hnrpll|72692|heterogeneous nuclear ribonucleoprotein L-like	NM_144802|Hnrpll|72692|heterogeneous nuclear ribonucleoprotein L-like
mm9_v1_chr15_-_76487319_76487388	0.941622	FOXN1.p2	BC062184|Cyhr1|54151|cysteine and histidine rich 1	BC082772|Cyhr1|54151|cysteine and histidine rich 1	AK080867|Cyhr1|54151|cysteine and histidine rich 1
mm9_v1_chr5_-_86601756_86601789	0.916498	FOXN1.p2	AK053583|Uba6|231380|ubiquitin-like modifier activating enzyme 6	BC063048|Uba6|231380|ubiquitin-like modifier activating enzyme 6	NM_172712|Uba6|231380|ubiquitin-like modifier activating enzyme 6	AK086539|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr19_-_5731699_5731742	0.910575	FOXN1.p2	AB012865|Sssca1|56390|Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)	AK005265|Sssca1|56390|Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)	BC021593|Sssca1|56390|Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)	AK012592|Sssca1|56390|Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)	AK012704|Sssca1|56390|Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)	AK011957|Sssca1|56390|Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)	NM_020491|Sssca1|56390|Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)
mm9_v1_chr2_+_32731648_32731777	0.906204	FOXN1.p2	NM_146119|Fam129b|227737|family with sequence similarity 129, member B	AK146953|Fam129b|227737|family with sequence similarity 129, member B	AK033735|Fam129b|227737|family with sequence similarity 129, member B	AK152207|Fam129b|227737|family with sequence similarity 129, member B	AK153489|Fam129b|227737|family with sequence similarity 129, member B	AK170512|Fam129b|227737|family with sequence similarity 129, member B	AK051396|Fam129b|227737|family with sequence similarity 129, member B	AK150642|Fam129b|227737|family with sequence similarity 129, member B	AK149818|Fam129b|227737|family with sequence similarity 129, member B	BC027843|Fam129b|227737|family with sequence similarity 129, member B	AK149888|Fam129b|227737|family with sequence similarity 129, member B	AK046583|Fam129b|227737|family with sequence similarity 129, member B
mm9_v1_chr2_+_120229945_120229959	0.889392	FOXN1.p2	BC075687|Ganc|76051|glucosidase, alpha; neutral C	AK135218|Ganc|76051|glucosidase, alpha; neutral C	AK220303|Ganc|76051|glucosidase, alpha; neutral C
mm9_v1_chr5_+_53132801_53132856	0.88761	FOXN1.p2	NM_025951|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	NM_028744|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AK035523|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AK170730|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AK016754|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AY148879|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AK011751|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta
mm9_v1_chr6_-_121423633_121423663	0.887572	FOXN1.p2	AK147351|Iqsec3|243621|IQ motif and Sec7 domain 3
mm9_v1_chr3_-_115710131_115710328	0.884226	FOXN1.p2	AF529196|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AF233322|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC050193|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC017136|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK075802|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK010008|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	NM_023214|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7
mm9_v1_chr7_-_134488827_134488936	0.882907	FOXN1.p2	BC026432|Zfp768|233890|zinc finger protein 768	NM_146202|Zfp768|233890|zinc finger protein 768	AK080841|Zfp768|233890|zinc finger protein 768	AK155155|Zfp768|233890|zinc finger protein 768
mm9_v1_chr11_-_116196604_116196673	0.877593	FOXN1.p2	AK140847|Foxj1|15223|forkhead box J1	BC082543|Foxj1|15223|forkhead box J1	NM_008240|Foxj1|15223|forkhead box J1
mm9_v1_chr11_-_23533564_23533665	0.875188	FOXN1.p2	AK129454|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	BC055049|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	BC079876|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	BC072622|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	AK053838|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene	NM_027860|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene
mm9_v1_chr10_+_117578842_117578914	0.872697	FOXN1.p2	NM_001162904|Mdm1|17245|transformed mouse 3T3 cell double minute 1	NM_001162905|Mdm1|17245|transformed mouse 3T3 cell double minute 1	NM_010785|Mdm1|17245|transformed mouse 3T3 cell double minute 1	NM_148922|Mdm1|17245|transformed mouse 3T3 cell double minute 1	AK004789|Mdm1|17245|transformed mouse 3T3 cell double minute 1	AK011769|Mdm1|17245|transformed mouse 3T3 cell double minute 1	BC052680|Mdm1|17245|transformed mouse 3T3 cell double minute 1	BC137608|Mdm1|17245|transformed mouse 3T3 cell double minute 1	BC144777|Mdm1|17245|transformed mouse 3T3 cell double minute 1
mm9_v1_chr9_+_55388955_55389013	0.865293	FOXN1.p2	NM_027397|Isl2|104360|insulin related protein 2 (islet 2)	AK013964|Isl2|104360|insulin related protein 2 (islet 2)	BC120880|Isl2|104360|insulin related protein 2 (islet 2)	BC148307|Isl2|104360|insulin related protein 2 (islet 2)
mm9_v1_chr2_-_25110765_25110876	0.856359	FOXN1.p2	
mm9_v1_chr9_+_72833327_72833369	0.85201	FOXN1.p2	NM_001114328|Ccpg1|72278|cell cycle progression 1	NM_028181|Ccpg1|72278|cell cycle progression 1
mm9_v1_chrX_+_20938001_20938025	0.843581	FOXN1.p2	BC137827|Gm5124|331392|predicted pseudogene 5124
mm9_v1_chr6_+_107479719_107479841	0.835826	FOXN1.p2	AK139965|Lrrn1|16979|leucine rich repeat protein 1, neuronal	AK139355|Lrrn1|16979|leucine rich repeat protein 1, neuronal	AK164849|Lrrn1|16979|leucine rich repeat protein 1, neuronal	D45913|Lrrn1|16979|leucine rich repeat protein 1, neuronal	NM_008516|Lrrn1|16979|leucine rich repeat protein 1, neuronal	BC058701|Lrrn1|16979|leucine rich repeat protein 1, neuronal	AK160841|Lrrn1|16979|leucine rich repeat protein 1, neuronal
mm9_v1_chr10_+_82321923_82322011	0.83455	FOXN1.p2	AB027565|Txnrd1|50493|thioredoxin reductase 1	AK151927|Txnrd1|50493|thioredoxin reductase 1	NM_001042513|Txnrd1|50493|thioredoxin reductase 1	NM_015762|Txnrd1|50493|thioredoxin reductase 1	AK146125|Txnrd1|50493|thioredoxin reductase 1	AK149625|Txnrd1|50493|thioredoxin reductase 1	AK168356|Txnrd1|50493|thioredoxin reductase 1	AK011902|Txnrd1|50493|thioredoxin reductase 1	AK186760|Txnrd1|50493|thioredoxin reductase 1	AK186897|Txnrd1|50493|thioredoxin reductase 1	AK194169|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr13_-_55614750_55614802	0.830972	FOXN1.p2	AK003019|Pdlim7|67399|PDZ and LIM domain 7	BC052698|Pdlim7|67399|PDZ and LIM domain 7	AK142933|Pdlim7|67399|PDZ and LIM domain 7	AK003338|Pdlim7|67399|PDZ and LIM domain 7	AK010141|Pdlim7|67399|PDZ and LIM domain 7	AK128987|Pdlim7|67399|PDZ and LIM domain 7	BC049565|Pdlim7|67399|PDZ and LIM domain 7	AK010339|Pdlim7|67399|PDZ and LIM domain 7	AK033091|Pdlim7|67399|PDZ and LIM domain 7	AK049902|Pdlim7|67399|PDZ and LIM domain 7	AK077998|Pdlim7|67399|PDZ and LIM domain 7	AK167476|Pdlim7|67399|PDZ and LIM domain 7	NM_001114087|Pdlim7|67399|PDZ and LIM domain 7	NM_001114088|Pdlim7|67399|PDZ and LIM domain 7	NM_026131|Pdlim7|67399|PDZ and LIM domain 7
mm9_v1_chr14_+_58042878_58042962	0.829926	FOXN1.p2	AK160633|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	NM_009376|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	AK135110|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	BC012250|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	AK168395|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	L31959|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)
mm9_v1_chr8_-_69010394_69010447	0.827244	FOXN1.p2	BC016246|1810029B16Rik|66282|RIKEN cDNA 1810029B16 gene	BC034844|1810029B16Rik|66282|RIKEN cDNA 1810029B16 gene	AK007637|1810029B16Rik|66282|RIKEN cDNA 1810029B16 gene	NM_025465|1810029B16Rik|66282|RIKEN cDNA 1810029B16 gene	AK009167|1810029B16Rik|66282|RIKEN cDNA 1810029B16 gene	AK011532|1810029B16Rik|66282|RIKEN cDNA 1810029B16 gene	AK051835|1810029B16Rik|66282|RIKEN cDNA 1810029B16 gene	AK031875|1810029B16Rik|66282|RIKEN cDNA 1810029B16 gene
mm9_v1_chr15_-_11925724_11925789	0.818181	FOXN1.p2	J03750|Sub1|20024|SUB1 homolog (S. cerevisiae)	BC010967|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK146335|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK154114|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK049260|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK132021|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK151734|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK048371|Sub1|20024|SUB1 homolog (S. cerevisiae)	NM_011294|Sub1|20024|SUB1 homolog (S. cerevisiae)
mm9_v1_chr4_-_131767968_131768170	0.816246	FOXN1.p2	AK083882|Ythdf2|213541|YTH domain family 2	BC028994|Ythdf2|213541|YTH domain family 2	BC014797|Ythdf2|213541|YTH domain family 2	AK150350|Ythdf2|213541|YTH domain family 2	AK150669|Ythdf2|213541|YTH domain family 2	AK151392|Ythdf2|213541|YTH domain family 2	AK151862|Ythdf2|213541|YTH domain family 2	AK159548|Ythdf2|213541|YTH domain family 2	AK031616|Ythdf2|213541|YTH domain family 2	AK144209|Ythdf2|213541|YTH domain family 2	AK034655|Ythdf2|213541|YTH domain family 2	NM_145393|Ythdf2|213541|YTH domain family 2
mm9_v1_chr14_+_61403399_61403486	0.815904	FOXN1.p2	NM_027436|Mipep|70478|mitochondrial intermediate peptidase	AK038479|Mipep|70478|mitochondrial intermediate peptidase	AK044460|Mipep|70478|mitochondrial intermediate peptidase	AK146428|Mipep|70478|mitochondrial intermediate peptidase	BC144798|Mipep|70478|mitochondrial intermediate peptidase	BC145711|Mipep|70478|mitochondrial intermediate peptidase	BC110358|Mipep|70478|mitochondrial intermediate peptidase	AK017491|Mipep|70478|mitochondrial intermediate peptidase	AK049000|Mipep|70478|mitochondrial intermediate peptidase	AK076613|Mipep|70478|mitochondrial intermediate peptidase
mm9_v1_chr1_+_92895285_92895313	0.81457	FOXN1.p2	NM_001111312|Lrrfip1|16978|leucine rich repeat (in FLII) interacting protein 1	AK044174|Lrrfip1|16978|leucine rich repeat (in FLII) interacting protein 1
mm9_v1_chr10_-_80630456_80630508	0.813573	FOXN1.p2	AK131903|Pias4|59004|protein inhibitor of activated STAT 4	AK076943|Pias4|59004|protein inhibitor of activated STAT 4	BC025159|Pias4|59004|protein inhibitor of activated STAT 4	NM_021501|Pias4|59004|protein inhibitor of activated STAT 4	AK131822|Pias4|59004|protein inhibitor of activated STAT 4	AK148066|Pias4|59004|protein inhibitor of activated STAT 4	AK147813|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr7_-_74790088_74790121	0.812053	FOXN1.p2	AK004904|Lrrc28|67867|leucine rich repeat containing 28	AK008713|Lrrc28|67867|leucine rich repeat containing 28	AK159417|Lrrc28|67867|leucine rich repeat containing 28	AK050154|Lrrc28|67867|leucine rich repeat containing 28	AK077270|Lrrc28|67867|leucine rich repeat containing 28	NM_027413|Lrrc28|67867|leucine rich repeat containing 28	NM_175124|Lrrc28|67867|leucine rich repeat containing 28
mm9_v1_chr4_-_141155782_141155838	0.809661	FOXN1.p2	X66903|Fblim1|74202|filamin binding LIM protein 1	NM_001163256|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr9_-_64585540_64585555	0.802891	FOXN1.p2	AK132072|Rab11a|53869|RAB11a, member RAS oncogene family	AK132159|Rab11a|53869|RAB11a, member RAS oncogene family	BC010722|Rab11a|53869|RAB11a, member RAS oncogene family
mm9_v1_chr11_-_120209770_120209811	0.802691	FOXN1.p2	M21495|Actg1|11465|actin, gamma, cytoplasmic 1	BC099371|Actg1|11465|actin, gamma, cytoplasmic 1	BC003337|Actg1|11465|actin, gamma, cytoplasmic 1	BC018571|Actg1|11465|actin, gamma, cytoplasmic 1	BC021796|Actg1|11465|actin, gamma, cytoplasmic 1	BC023248|Actg1|11465|actin, gamma, cytoplasmic 1	NM_009609|Actg1|11465|actin, gamma, cytoplasmic 1	AF195094|Actg1|11465|actin, gamma, cytoplasmic 1	AK149927|Actg1|11465|actin, gamma, cytoplasmic 1	AK150209|Actg1|11465|actin, gamma, cytoplasmic 1	AK162157|Actg1|11465|actin, gamma, cytoplasmic 1	AK076081|Actg1|11465|actin, gamma, cytoplasmic 1	AK087983|Actg1|11465|actin, gamma, cytoplasmic 1	AK157726|Actg1|11465|actin, gamma, cytoplasmic 1	AK012251|Actg1|11465|actin, gamma, cytoplasmic 1	AK152202|Actg1|11465|actin, gamma, cytoplasmic 1	AK153446|Actg1|11465|actin, gamma, cytoplasmic 1	AK159867|Actg1|11465|actin, gamma, cytoplasmic 1
mm9_v1_chr19_+_46227029_46227030	0.796402	FOXN1.p2	AK039570|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr1_+_180336178_180336231	0.785043	FOXN1.p2	AK019802|Efcab2|68226|EF-hand calcium binding domain 2	AK019663|Efcab2|68226|EF-hand calcium binding domain 2	AK015157|Efcab2|68226|EF-hand calcium binding domain 2	AK029880|Efcab2|68226|EF-hand calcium binding domain 2
mm9_v1_chr17_+_25910720_25910771	0.784409	FOXN1.p2	AK145408|Narfl|67563|nuclear prelamin A recognition factor-like	NM_026238|Narfl|67563|nuclear prelamin A recognition factor-like	AK014038|Narfl|67563|nuclear prelamin A recognition factor-like	AK043694|Narfl|67563|nuclear prelamin A recognition factor-like	AK018548|Narfl|67563|nuclear prelamin A recognition factor-like	BC052830|Narfl|67563|nuclear prelamin A recognition factor-like	BC020468|Narfl|67563|nuclear prelamin A recognition factor-like	BC025108|Narfl|67563|nuclear prelamin A recognition factor-like
mm9_v1_chr2_-_28438765_28438804	0.782182	FOXN1.p2	BC027055|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	AK147014|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	AK137359|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	NM_148928|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr14_-_32308152_32308237	0.780073	FOXN1.p2	BC030449|Mettl6|67011|methyltransferase like 6	NM_025907|Mettl6|67011|methyltransferase like 6	AK133735|Mettl6|67011|methyltransferase like 6	AK006715|Mettl6|67011|methyltransferase like 6	AK005448|Mettl6|67011|methyltransferase like 6	AK078185|Mettl6|67011|methyltransferase like 6	AK082949|Mettl6|67011|methyltransferase like 6
mm9_v1_chr14_-_76410654_76410753	0.778532	FOXN1.p2	BC027173|Gtf2f2|68705|general transcription factor IIF, polypeptide 2	AK144858|Gtf2f2|68705|general transcription factor IIF, polypeptide 2	NM_026816|Gtf2f2|68705|general transcription factor IIF, polypeptide 2
mm9_v1_chr14_-_34260308_34260313	0.772819	FOXN1.p2	BC053027|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr5_-_89104575_89104676	0.763855	FOXN1.p2	AK168385|Grsf1|231413|G-rich RNA sequence binding factor 1	AK168459|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_001098476|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr14_-_20642973_20643066	0.761302	FOXN1.p2	AK162433|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK148686|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK162070|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK160555|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK012451|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	BC023932|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	BC096571|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK012460|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK003732|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	BC048357|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK012486|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	NM_026528|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK160696|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene
mm9_v1_chr7_+_117161821_117161836	0.761018	FOXN1.p2	AK079903|Ipo7|233726|importin 7	AK148820|Ipo7|233726|importin 7	AK169981|Ipo7|233726|importin 7
mm9_v1_chr13_+_78337168_78337277	0.755718	FOXN1.p2	AK082108|A830082K12Rik|320174|RIKEN cDNA A830082K12 gene
mm9_v1_chr4_+_100449274_100449299	0.755289	FOXN1.p2	AK080923|Cachd1|320508|cache domain containing 1	BC058676|Cachd1|320508|cache domain containing 1	NM_198037|Cachd1|320508|cache domain containing 1
mm9_v1_chr1_-_174136809_174136866	0.754356	FOXN1.p2	BC038282|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK161635|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK077421|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK089070|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK161977|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK153493|Pea15a|18611|phosphoprotein enriched in astrocytes 15A	AK153141|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr16_+_16870904_16870931	0.752608	FOXN1.p2	AB045324|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr16_-_45724422_45724643	0.748288	FOXN1.p2	BC043027|Tagln3|56370|transgelin 3	AB031291|Tagln3|56370|transgelin 3	AK013484|Tagln3|56370|transgelin 3	BC055338|Tagln3|56370|transgelin 3	NM_019754|Tagln3|56370|transgelin 3
mm9_v1_chr9_-_107192018_107192146	0.746538	FOXN1.p2	AK051962|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	AK078977|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	AK172578|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	AK172344|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	AK151881|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	AK144637|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3
mm9_v1_chr2_-_126701791_126701996	0.744614	FOXN1.p2	BC145122|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	BC150709|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AF376052|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK162483|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK014698|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AF149013|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AY032951|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK052823|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	NM_001164325|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	NM_021450|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7
mm9_v1_chr12_+_88488104_88488148	0.742873	FOXN1.p2	AB041613|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr5_+_149996135_149996309	0.740509	FOXN1.p2	NM_001013378|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115149|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115150|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115151|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115153|Uspl1|231915|ubiquitin specific peptidase like 1	AK050969|Uspl1|231915|ubiquitin specific peptidase like 1	AK145409|Uspl1|231915|ubiquitin specific peptidase like 1	BC028849|Uspl1|231915|ubiquitin specific peptidase like 1	AK168981|Uspl1|231915|ubiquitin specific peptidase like 1	AK146820|Uspl1|231915|ubiquitin specific peptidase like 1	AK168702|Uspl1|231915|ubiquitin specific peptidase like 1	AK088787|Uspl1|231915|ubiquitin specific peptidase like 1	AK161654|Uspl1|231915|ubiquitin specific peptidase like 1	BC086664|Uspl1|231915|ubiquitin specific peptidase like 1	AK179867|Uspl1|231915|ubiquitin specific peptidase like 1
mm9_v1_chr6_-_51419726_51419880	0.740058	FOXN1.p2	BC141253|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1	BC145588|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1	AF073993|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1	AK089012|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr7_+_146038066_146038078	0.738433	FOXN1.p2	BC066022|Ppp2r2d|52432|protein phosphatase 2, regulatory subunit B, delta isoform	NM_026391|Ppp2r2d|52432|protein phosphatase 2, regulatory subunit B, delta isoform
mm9_v1_chr12_-_71212591_71212711	0.738213	FOXN1.p2	AK141891|Nin|18080|ninein	AK134860|Nin|18080|ninein
mm9_v1_chr5_-_34278864_34278941	0.733856	FOXN1.p2	AF101435|Whsc2|24116|Wolf-Hirschhorn syndrome candidate 2 (human)	BC038003|Whsc2|24116|Wolf-Hirschhorn syndrome candidate 2 (human)	AK137949|Whsc2|24116|Wolf-Hirschhorn syndrome candidate 2 (human)	AK078760|Whsc2|24116|Wolf-Hirschhorn syndrome candidate 2 (human)	NM_011914|Whsc2|24116|Wolf-Hirschhorn syndrome candidate 2 (human)	AK144173|Whsc2|24116|Wolf-Hirschhorn syndrome candidate 2 (human)	AK088384|Whsc2|24116|Wolf-Hirschhorn syndrome candidate 2 (human)
mm9_v1_chr6_+_71657791_71657963	0.731864	FOXN1.p2	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr7_-_107520411_107520510	0.731847	FOXN1.p2	AK146268|Ppme1|72590|protein phosphatase methylesterase 1	AK028261|Ppme1|72590|protein phosphatase methylesterase 1	AK012256|Ppme1|72590|protein phosphatase methylesterase 1	AK154876|Ppme1|72590|protein phosphatase methylesterase 1
mm9_v1_chr11_-_104411728_104411933	0.731696	FOXN1.p2	AK039377|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK148278|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC023187|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK161471|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC157955|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172100|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172149|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	NM_145436|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)
mm9_v1_chr16_+_37539964_37540021	0.730887	FOXN1.p2	AK016099|Rabl3|67657|RAB, member of RAS oncogene family-like 3	NM_001042499|Rabl3|67657|RAB, member of RAS oncogene family-like 3	AK011280|Rabl3|67657|RAB, member of RAS oncogene family-like 3	AK028195|Rabl3|67657|RAB, member of RAS oncogene family-like 3	AK156982|Rabl3|67657|RAB, member of RAS oncogene family-like 3	AK028269|Rabl3|67657|RAB, member of RAS oncogene family-like 3	BC050194|Rabl3|67657|RAB, member of RAS oncogene family-like 3
mm9_v1_chr4_+_106584074_106584164	0.730754	FOXN1.p2	AK017711|Ssbp3|72475|single-stranded DNA binding protein 3	NM_023672|Ssbp3|72475|single-stranded DNA binding protein 3	NM_198438|Ssbp3|72475|single-stranded DNA binding protein 3	AK011853|Ssbp3|72475|single-stranded DNA binding protein 3	BC035475|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr11_-_94382743_94382835	0.727621	FOXN1.p2	AK029929|Mycbpap|104601|MYCBP associated protein	NM_170671|Mycbpap|104601|MYCBP associated protein
mm9_v1_chr13_-_104564553_104564699	0.726725	FOXN1.p2	AK039311|Srsf12|218543|serine/arginine-rich splicing factor 12	AK052265|Srsf12|218543|serine/arginine-rich splicing factor 12
mm9_v1_chr2_+_160471695_160471802	0.725501	FOXN1.p2	AK164061|Top1|21969|topoisomerase (DNA) I	AK083930|Top1|21969|topoisomerase (DNA) I	AK166844|Top1|21969|topoisomerase (DNA) I	BC048743|Top1|21969|topoisomerase (DNA) I	BC002095|Top1|21969|topoisomerase (DNA) I	AK160590|Top1|21969|topoisomerase (DNA) I	BC092349|Top1|21969|topoisomerase (DNA) I
mm9_v1_chr18_+_61714969_61714972	0.723634	FOXN1.p2	AK152793|Csnk1a1|93687|casein kinase 1, alpha 1	AK166318|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr14_-_52898946_52899069	0.722329	FOXN1.p2	AK044202|Rab2b|76338|RAB2B, member RAS oncogene family	BC033312|Rab2b|76338|RAB2B, member RAS oncogene family	AK005230|Rab2b|76338|RAB2B, member RAS oncogene family	BC054719|Rab2b|76338|RAB2B, member RAS oncogene family	AK038393|Rab2b|76338|RAB2B, member RAS oncogene family	AK038576|Rab2b|76338|RAB2B, member RAS oncogene family	AK169657|Rab2b|76338|RAB2B, member RAS oncogene family	BC046334|Rab2b|76338|RAB2B, member RAS oncogene family	NM_172601|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr5_-_4104331_4104507	0.720323	FOXN1.p2	AK028355|Cyp51|13121|cytochrome P450, family 51	BC031813|Cyp51|13121|cytochrome P450, family 51	AK031059|Cyp51|13121|cytochrome P450, family 51	AK075764|Cyp51|13121|cytochrome P450, family 51	AK076983|Cyp51|13121|cytochrome P450, family 51	AF166266|Cyp51|13121|cytochrome P450, family 51	AK028815|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr7_-_26035683_26035785	0.716495	FOXN1.p2	BC063092|Erf|13875|Ets2 repressor factor	BC053045|Erf|13875|Ets2 repressor factor	BC059176|Erf|13875|Ets2 repressor factor	AK159225|Erf|13875|Ets2 repressor factor	NM_010155|Erf|13875|Ets2 repressor factor
mm9_v1_chrX_-_50973482_50973619	0.716489	FOXN1.p2	AK003646|Cxx1b|553127|CAAX box 1 homolog B (human)	BC029838|Cxx1b|553127|CAAX box 1 homolog B (human)	NM_001018063|Cxx1b|553127|CAAX box 1 homolog B (human)
mm9_v1_chr8_-_124999921_124999977	0.715394	FOXN1.p2	AK079883|Rnf166|68718|ring finger protein 166	BC131924|Rnf166|68718|ring finger protein 166	BC132281|Rnf166|68718|ring finger protein 166	AK151813|Rnf166|68718|ring finger protein 166	NM_001033142|Rnf166|68718|ring finger protein 166
mm9_v1_chr19_+_46227016_46227019	0.707863	FOXN1.p2	AK041959|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr3_+_82162037_82162075	0.705902	FOXN1.p2	AK162555|Mtap9|213582|microtubule-associated protein 9
mm9_v1_chr17_+_6106829_6106853	0.703883	FOXN1.p2	NM_001103181|Tulp4|68842|tubby like protein 4
mm9_v1_chr14_-_52898915_52898939	0.699028	FOXN1.p2	AB232586|Rab2b|76338|RAB2B, member RAS oncogene family	AK160351|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr14_+_56472872_56473037	0.693984	FOXN1.p2	BC151043|Nynrin|277154|NYN domain and retroviral integrase containing	NM_001040072|Nynrin|277154|NYN domain and retroviral integrase containing
mm9_v1_chr6_-_21802087_21802170	0.691794	FOXN1.p2	BC065152|Tspan12|269831|tetraspanin 12	AK033554|Tspan12|269831|tetraspanin 12	BC068240|Tspan12|269831|tetraspanin 12
mm9_v1_chr1_-_78193381_78193710	0.683151	FOXN1.p2	BC048699|Pax3|18505|paired box gene 3	AK157760|Pax3|18505|paired box gene 3	AK012493|Pax3|18505|paired box gene 3	AK014337|Pax3|18505|paired box gene 3	AK044985|Pax3|18505|paired box gene 3	AK144973|Pax3|18505|paired box gene 3	AK147919|Pax3|18505|paired box gene 3	X59358|Pax3|18505|paired box gene 3	AK048723|Pax3|18505|paired box gene 3	AK083424|Pax3|18505|paired box gene 3	AK148354|Pax3|18505|paired box gene 3	AK045018|Pax3|18505|paired box gene 3	NM_001159520|Pax3|18505|paired box gene 3	NM_008781|Pax3|18505|paired box gene 3
mm9_v1_chr4_-_124370770_124370859	0.683061	FOXN1.p2	BC043139|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK012550|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	NM_026031|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK147113|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	BC061074|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK145266|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr4_+_56815193_56815243	0.680435	FOXN1.p2	NM_001081420|BC026590|230234|cDNA sequence BC026590	AK043588|BC026590|230234|cDNA sequence BC026590	BC026590|BC026590|230234|cDNA sequence BC026590
mm9_v1_chr9_-_100446544_100446556	0.680388	FOXN1.p2	AF043259|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr19_+_45438212_45438344	0.679243	FOXN1.p2	NM_001037758|Btrc|12234|beta-transducin repeat containing protein	NM_009771|Btrc|12234|beta-transducin repeat containing protein	AK220183|Btrc|12234|beta-transducin repeat containing protein	AK145624|Btrc|12234|beta-transducin repeat containing protein	AK052317|Btrc|12234|beta-transducin repeat containing protein	AK083257|Btrc|12234|beta-transducin repeat containing protein	AF081887|Btrc|12234|beta-transducin repeat containing protein	AK032221|Btrc|12234|beta-transducin repeat containing protein	AK145091|Btrc|12234|beta-transducin repeat containing protein	BC052879|Btrc|12234|beta-transducin repeat containing protein	BC003989|Btrc|12234|beta-transducin repeat containing protein	AF099932|Btrc|12234|beta-transducin repeat containing protein	AF110396|Btrc|12234|beta-transducin repeat containing protein	AF112979|Btrc|12234|beta-transducin repeat containing protein	AK180045|Btrc|12234|beta-transducin repeat containing protein	AK188552|Btrc|12234|beta-transducin repeat containing protein	AK189588|Btrc|12234|beta-transducin repeat containing protein
mm9_v1_chr11_+_77576790_77576810	0.678166	FOXN1.p2	AK146852|Myo18a|360013|myosin XVIIIA
mm9_v1_chr1_-_59176583_59176664	0.677434	FOXN1.p2	AK170118|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	AK167733|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_001037812|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
mm9_v1_chr15_-_79376944_79377023	0.673923	FOXN1.p2	AK151061|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK152749|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK152831|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	BC062910|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK161001|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK161012|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	AK039888|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	NM_199079|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr5_+_77380332_77380435	0.673274	FOXN1.p2	AK146722|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	BC052691|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	NM_025939|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm9_v1_chr17_-_37088578_37088736	0.671548	FOXN1.p2	BC027737|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK077455|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK089107|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK162607|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK170104|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK005379|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	NM_029632|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm9_v1_chr8_-_41597015_41597116	0.670572	FOXN1.p2	AK132063|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	BC006021|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK137838|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK147048|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK166449|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK007767|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK009561|Cnot7|18983|CCR4-NOT transcription complex, subunit 7
mm9_v1_chr18_+_35931207_35931276	0.670518	FOXN1.p2	NM_019912|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	AK146659|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	AK160567|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	AK005355|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	AK139623|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	U62483|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	AK136197|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2
mm9_v1_chr17_-_84865455_84865547	0.666207	FOXN1.p2	EF222207|Thada|240174|thyroid adenoma associated	AK154078|Thada|240174|thyroid adenoma associated	AK044550|Thada|240174|thyroid adenoma associated	NM_183021|Thada|240174|thyroid adenoma associated
mm9_v1_chr9_+_35366065_35366179	0.664738	FOXN1.p2	AK030639|Pus3|67049|pseudouridine synthase 3
mm9_v1_chr2_+_151319915_151320083	0.664517	FOXN1.p2	AK039136|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	AK137088|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	AK013024|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	BC050936|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	NM_198326|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	BC106101|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	AK181317|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)
mm9_v1_chr4_-_133801438_133801522	0.664089	FOXN1.p2	AK156931|Zfp593|68040|zinc finger protein 593	BC003465|Zfp593|68040|zinc finger protein 593	AK014081|Zfp593|68040|zinc finger protein 593	AK133585|Zfp593|68040|zinc finger protein 593	AK005247|Zfp593|68040|zinc finger protein 593	NM_024215|Zfp593|68040|zinc finger protein 593
mm9_v1_chr8_+_19784580_19784661	0.663129	FOXN1.p2	AK088897|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene
mm9_v1_chr17_+_56109884_56109905	0.66095	FOXN1.p2	AK142491|Shd|20420|src homology 2 domain-containing transforming protein D	NM_001159523|Shd|20420|src homology 2 domain-containing transforming protein D	NM_009168|Shd|20420|src homology 2 domain-containing transforming protein D	AB018423|Shd|20420|src homology 2 domain-containing transforming protein D
mm9_v1_chr13_+_14156038_14156092	0.657365	FOXN1.p2	AK136105|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK041414|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_194262|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_198122|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK161669|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK031062|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)
mm9_v1_chr2_-_152223710_152223930	0.653639	FOXN1.p2	BC067019|Sox12|20667|SRY-box containing gene 12	NM_011438|Sox12|20667|SRY-box containing gene 12
mm9_v1_chr7_-_106632113_106632218	0.649618	FOXN1.p2	AK206775|Rps3|27050|ribosomal protein S3	X76772|Rps3|27050|ribosomal protein S3	BC010721|Rps3|27050|ribosomal protein S3	AK165174|Rps3|27050|ribosomal protein S3	AK167266|Rps3|27050|ribosomal protein S3	AK168845|Rps3|27050|ribosomal protein S3	AK150479|Rps3|27050|ribosomal protein S3	AK003181|Rps3|27050|ribosomal protein S3	AK011655|Rps3|27050|ribosomal protein S3	AK146796|Rps3|27050|ribosomal protein S3	AK012234|Rps3|27050|ribosomal protein S3	AK012314|Rps3|27050|ribosomal protein S3	AK012538|Rps3|27050|ribosomal protein S3	AK088038|Rps3|27050|ribosomal protein S3	AK143603|Rps3|27050|ribosomal protein S3	AK148030|Rps3|27050|ribosomal protein S3	AK160526|Rps3|27050|ribosomal protein S3	AK167210|Rps3|27050|ribosomal protein S3	AK010579|Rps3|27050|ribosomal protein S3	AK010678|Rps3|27050|ribosomal protein S3	AK051243|Rps3|27050|ribosomal protein S3	AK146165|Rps3|27050|ribosomal protein S3	AK159508|Rps3|27050|ribosomal protein S3	AK164077|Rps3|27050|ribosomal protein S3	AK166750|Rps3|27050|ribosomal protein S3	NM_012052|Rps3|27050|ribosomal protein S3
mm9_v1_chr2_-_25110892_25110940	0.641121	FOXN1.p2	BC049789|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK163207|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK143124|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK169885|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK019617|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	NM_001082476|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1
mm9_v1_chr11_-_85048564_85048637	0.635423	FOXN1.p2	BC018442|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	BC019152|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK133853|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	NM_025825|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK004888|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm9_v1_chrX_-_13423666_13423727	0.631186	FOXN1.p2	NM_009806|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17137|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17138|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm9_v1_chr3_+_67178037_67178091	0.630873	FOXN1.p2	BC027526|Mlf1|17349|myeloid leukemia factor 1	AF100171|Mlf1|17349|myeloid leukemia factor 1
mm9_v1_chr9_-_21856445_21856470	0.627893	FOXN1.p2	U29148|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	BC052097|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	AK090281|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	NM_010487|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm9_v1_chr7_-_120512849_120512864	0.627817	FOXN1.p2	BC050781|Btbd10|68815|BTB (POZ) domain containing 10	NM_133700|Btbd10|68815|BTB (POZ) domain containing 10
mm9_v1_chr3_-_108365251_108365316	0.623792	FOXN1.p2	AK046697|Tmem167b|67495|transmembrane protein 167B	BC050932|Tmem167b|67495|transmembrane protein 167B	AK008415|Tmem167b|67495|transmembrane protein 167B	BC055449|Tmem167b|67495|transmembrane protein 167B
mm9_v1_chr11_-_100302306_100302402	0.622428	FOXN1.p2	AK162770|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	AK148222|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	AK166393|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	AK082816|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	NM_001102650|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	NM_026561|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like
mm9_v1_chr2_+_145501211_145501298	0.620634	FOXN1.p2	AK031463|BC039771|408057|cDNA sequence BC039771
mm9_v1_chr19_+_5637741_5637828	0.615878	FOXN1.p2	AK089489|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK144565|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK154630|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK155889|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK157076|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	M61909|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	DQ020177|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr1_+_10029834_10029872	0.615426	FOXN1.p2	AK032310|Cspp1|211660|centrosome and spindle pole associated protein 1	AK077173|Cspp1|211660|centrosome and spindle pole associated protein 1	AK013065|Cspp1|211660|centrosome and spindle pole associated protein 1	AK015133|Cspp1|211660|centrosome and spindle pole associated protein 1
mm9_v1_chr4_-_56815114_56815205	0.613615	FOXN1.p2	BC052387|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF140786|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK031367|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF367244|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AF387811|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK035944|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	NM_026079|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	AK147153|Ikbkap|230233|inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein
mm9_v1_chr19_-_46072931_46072993	0.611184	FOXN1.p2	AK159765|9130011E15Rik|71617|RIKEN cDNA 9130011E15 gene	NM_198296|9130011E15Rik|71617|RIKEN cDNA 9130011E15 gene
mm9_v1_chr14_-_76510534_76510637	0.608439	FOXN1.p2	AK173238|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	BC029731|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK004707|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK082912|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	NM_026177|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK016681|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene
mm9_v1_chr14_+_76245144_76245241	0.604175	FOXN1.p2	BC092381|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr3_-_104315689_104315735	0.603899	FOXN1.p2	BC138422|Lrig2|269473|leucine-rich repeats and immunoglobulin-like domains 2	BC094228|Lrig2|269473|leucine-rich repeats and immunoglobulin-like domains 2
mm9_v1_chr2_-_151566988_151567015	0.602912	FOXN1.p2	AK078867|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	BC012260|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	AK032644|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	AK045891|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	AK078035|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1
mm9_v1_chr9_-_60535699_60535786	0.601612	FOXN1.p2	BC016574|Lrrc49|102747|leucine rich repeat containing 49	AK041627|Lrrc49|102747|leucine rich repeat containing 49	AK049268|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr1_+_136311948_136312075	0.593043	FOXN1.p2	AK012847|Adipor1|72674|adiponectin receptor 1	AK143679|Adipor1|72674|adiponectin receptor 1	AK168069|Adipor1|72674|adiponectin receptor 1	NM_028320|Adipor1|72674|adiponectin receptor 1	AK151565|Adipor1|72674|adiponectin receptor 1	AY424290|Adipor1|72674|adiponectin receptor 1	BC014875|Adipor1|72674|adiponectin receptor 1	AK148140|Adipor1|72674|adiponectin receptor 1	AK167896|Adipor1|72674|adiponectin receptor 1
mm9_v1_chr9_+_22280158_22280205	0.589926	FOXN1.p2	BC046426|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	NM_178415|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	NM_181316|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK166297|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK086114|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK144730|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK028200|Bbs9|319845|Bardet-Biedl syndrome 9 (human)
mm9_v1_chr11_+_119464299_119464363	0.589788	FOXN1.p2	AK087217|Rptor|74370|regulatory associated protein of MTOR, complex 1	NM_028898|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK029341|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK144082|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK172276|Rptor|74370|regulatory associated protein of MTOR, complex 1
mm9_v1_chr1_-_33871261_33871282	0.589233	FOXN1.p2	AK122541|Zfp451|98403|zinc finger protein 451	BC019546|Zfp451|98403|zinc finger protein 451	AK030088|Zfp451|98403|zinc finger protein 451	NM_133817|Zfp451|98403|zinc finger protein 451
mm9_v1_chr17_+_26698421_26698560	0.585486	FOXN1.p2	BC005516|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	NM_026170|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK173123|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK003239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK088157|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK004629|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK151239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK084385|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	BC083144|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AB093571|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	CT010230|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr1_+_89223558_89223642	0.583698	FOXN1.p2	NM_146112|Gigyf2|227331|GRB10 interacting GYF protein 2	AK079246|Gigyf2|227331|GRB10 interacting GYF protein 2	NM_001110212|Gigyf2|227331|GRB10 interacting GYF protein 2	AK011414|Gigyf2|227331|GRB10 interacting GYF protein 2	AK034426|Gigyf2|227331|GRB10 interacting GYF protein 2	AK160878|Gigyf2|227331|GRB10 interacting GYF protein 2	AK144058|Gigyf2|227331|GRB10 interacting GYF protein 2	BC089036|Gigyf2|227331|GRB10 interacting GYF protein 2	BC006835|Gigyf2|227331|GRB10 interacting GYF protein 2	BC076610|Gigyf2|227331|GRB10 interacting GYF protein 2	AY176043|Gigyf2|227331|GRB10 interacting GYF protein 2	AK137375|Gigyf2|227331|GRB10 interacting GYF protein 2
mm9_v1_chr19_+_5637712_5637737	0.580753	FOXN1.p2	BC003818|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr9_-_96918641_96918773	0.579312	FOXN1.p2	BC055705|Spsb4|211949|splA/ryanodine receptor domain and SOCS box containing 4	AK142195|Spsb4|211949|splA/ryanodine receptor domain and SOCS box containing 4	AF403039|Spsb4|211949|splA/ryanodine receptor domain and SOCS box containing 4	NM_145134|Spsb4|211949|splA/ryanodine receptor domain and SOCS box containing 4
mm9_v1_chr7_+_133630844_133630958	0.577383	FOXN1.p2	NM_001163713|Tufm|233870|Tu translation elongation factor, mitochondrial	NM_172745|Tufm|233870|Tu translation elongation factor, mitochondrial	AK152858|Tufm|233870|Tu translation elongation factor, mitochondrial	AK153135|Tufm|233870|Tu translation elongation factor, mitochondrial	BC100596|Tufm|233870|Tu translation elongation factor, mitochondrial	AK084724|Tufm|233870|Tu translation elongation factor, mitochondrial	BC060959|Tufm|233870|Tu translation elongation factor, mitochondrial	AK075857|Tufm|233870|Tu translation elongation factor, mitochondrial
mm9_v1_chr9_+_21397379_21397470	0.573508	FOXN1.p2	AK088045|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK089121|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	BC025883|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK034762|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene
mm9_v1_chr12_+_112997057_112997169	0.5729	FOXN1.p2	NM_001025360|Klc1|16593|kinesin light chain 1	NM_001081959|Klc1|16593|kinesin light chain 1	NM_008450|Klc1|16593|kinesin light chain 1	AK031309|Klc1|16593|kinesin light chain 1	AF055665|Klc1|16593|kinesin light chain 1
mm9_v1_chr7_+_35697397_35697452	0.57021	FOXN1.p2	AK145843|Pepd|18624|peptidase D	BC131945|Pepd|18624|peptidase D	BC131973|Pepd|18624|peptidase D	NM_008820|Pepd|18624|peptidase D	U51014|Pepd|18624|peptidase D	AK168384|Pepd|18624|peptidase D	AK010581|Pepd|18624|peptidase D	D82983|Pepd|18624|peptidase D	BC086644|Pepd|18624|peptidase D
mm9_v1_chr15_-_81877947_81878027	0.570131	FOXN1.p2	BC083315|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK134943|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	BC026755|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	BC054450|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK004489|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK168930|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	U95114|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK168808|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK145608|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK169103|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	AK145391|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	NM_011482|Nhp2l1|20826|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
mm9_v1_chr17_-_33822327_33822413	0.567451	FOXN1.p2	BC035525|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK159848|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	BC017539|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	BC065172|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK168347|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK133911|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK166670|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK169101|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK171892|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK145343|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK011521|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK051976|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK220299|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	NM_001109913|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	NM_029804|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M
mm9_v1_chr2_-_44782719_44782794	0.565532	FOXN1.p2	AK028468|Gtdc1|227835|glycosyltransferase-like domain containing 1	AK163943|Gtdc1|227835|glycosyltransferase-like domain containing 1
mm9_v1_chr15_-_44259378_44259454	0.56397	FOXN1.p2	AK167855|Nudcd1|67429|NudC domain containing 1	AK168122|Nudcd1|67429|NudC domain containing 1	AK029339|Nudcd1|67429|NudC domain containing 1	BC031583|Nudcd1|67429|NudC domain containing 1	AK077673|Nudcd1|67429|NudC domain containing 1	AK083587|Nudcd1|67429|NudC domain containing 1
mm9_v1_chr9_+_78296012_78296019	0.561149	FOXN1.p2	NM_026658|Mto1|68291|mitochondrial translation optimization 1 homolog (S. cerevisiae)	AK019088|Mto1|68291|mitochondrial translation optimization 1 homolog (S. cerevisiae)	AK017573|Mto1|68291|mitochondrial translation optimization 1 homolog (S. cerevisiae)
mm9_v1_chr10_+_62562532_62562550	0.559428	FOXN1.p2	BC092234|Atoh7|53404|atonal homolog 7 (Drosophila)
mm9_v1_chr14_-_34260323_34260352	0.557444	FOXN1.p2	AK139498|Mapk8|26419|mitogen-activated protein kinase 8	AK032486|Mapk8|26419|mitogen-activated protein kinase 8	AK043102|Mapk8|26419|mitogen-activated protein kinase 8	AK085745|Mapk8|26419|mitogen-activated protein kinase 8	AK030767|Mapk8|26419|mitogen-activated protein kinase 8	NM_016700|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr5_+_9266137_9266216	0.55735	FOXN1.p2	AK079644|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK165601|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK081041|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK034358|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK045969|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK048738|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK133610|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	NM_172706|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	BC132290|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	BC138012|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene
mm9_v1_chr7_+_146038086_146038160	0.557154	FOXN1.p2	AF366393|Ppp2r2d|52432|protein phosphatase 2, regulatory subunit B, delta isoform
mm9_v1_chr12_+_9036802_9036858	0.554988	FOXN1.p2	AK078146|Ttc32|75516|tetratricopeptide repeat domain 32	NM_029321|Ttc32|75516|tetratricopeptide repeat domain 32	AK005950|Ttc32|75516|tetratricopeptide repeat domain 32	BC119273|Ttc32|75516|tetratricopeptide repeat domain 32	AK144458|Ttc32|75516|tetratricopeptide repeat domain 32
mm9_v1_chr5_+_32000312_32000424	0.554394	FOXN1.p2	AK156929|Bre|107976|brain and reproductive organ-expressed protein	AK020047|Bre|107976|brain and reproductive organ-expressed protein	BC061000|Bre|107976|brain and reproductive organ-expressed protein	AK050695|Bre|107976|brain and reproductive organ-expressed protein	AK080991|Bre|107976|brain and reproductive organ-expressed protein	AK166884|Bre|107976|brain and reproductive organ-expressed protein	AF440752|Bre|107976|brain and reproductive organ-expressed protein	AF527952|Bre|107976|brain and reproductive organ-expressed protein	AF527953|Bre|107976|brain and reproductive organ-expressed protein	AF527954|Bre|107976|brain and reproductive organ-expressed protein	AF527955|Bre|107976|brain and reproductive organ-expressed protein	AF538925|Bre|107976|brain and reproductive organ-expressed protein	NM_144541|Bre|107976|brain and reproductive organ-expressed protein	NM_181279|Bre|107976|brain and reproductive organ-expressed protein	NM_181280|Bre|107976|brain and reproductive organ-expressed protein	NM_181281|Bre|107976|brain and reproductive organ-expressed protein	NM_181282|Bre|107976|brain and reproductive organ-expressed protein
mm9_v1_chr4_-_118905241_118905332	0.554388	FOXN1.p2	AK158349|AU022252|230696|expressed sequence AU022252	AK167445|AU022252|230696|expressed sequence AU022252	BC035522|AU022252|230696|expressed sequence AU022252	AK082225|4930538K18Rik|75180|RIKEN cDNA 4930538K18 gene	BC089614|AU022252|230696|expressed sequence AU022252	NM_001012400|AU022252|230696|expressed sequence AU022252
mm9_v1_chr1_-_127808723_127808763	0.553451	FOXN1.p2	BC058599|Lypd1|72585|Ly6/Plaur domain containing 1
mm9_v1_chr19_+_8994860_8994941	0.55204	FOXN1.p2	AK144402|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC004038|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	NM_024256|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK048428|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC012930|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK140424|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
mm9_v1_chr11_-_102417449_102417456	0.549057	FOXN1.p2	AK084888|Gpatch8|237943|G patch domain containing 8
mm9_v1_chr3_-_104315837_104315857	0.546323	FOXN1.p2	AK158022|Lrig2|269473|leucine-rich repeats and immunoglobulin-like domains 2	AK155089|Lrig2|269473|leucine-rich repeats and immunoglobulin-like domains 2
mm9_v1_chr4_+_119212261_119212343	0.546201	FOXN1.p2	AK082840|Foxj3|230700|forkhead box J3	AK171564|Foxj3|230700|forkhead box J3	AK129271|Foxj3|230700|forkhead box J3	BC058231|Foxj3|230700|forkhead box J3	NM_172699|Foxj3|230700|forkhead box J3	AK133640|Foxj3|230700|forkhead box J3	AK163298|Foxj3|230700|forkhead box J3	AK086875|Foxj3|230700|forkhead box J3	AK139508|Foxj3|230700|forkhead box J3
mm9_v1_chr5_+_77380615_77380657	0.545578	FOXN1.p2	AK159398|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm9_v1_chr1_-_159342713_159342735	0.542143	FOXN1.p2	AK039584|Rasal2|226525|RAS protein activator like 2	NM_177644|Rasal2|226525|RAS protein activator like 2
mm9_v1_chr7_-_4966232_4966265	0.540864	FOXN1.p2	AF126746|Fiz1|23877|Flt3 interacting zinc finger protein 1	BC106113|Fiz1|23877|Flt3 interacting zinc finger protein 1	AK162454|Fiz1|23877|Flt3 interacting zinc finger protein 1	AK170633|Fiz1|23877|Flt3 interacting zinc finger protein 1	AK139120|Fiz1|23877|Flt3 interacting zinc finger protein 1	AK220212|Fiz1|23877|Flt3 interacting zinc finger protein 1
mm9_v1_chrX_-_72661877_72661890	0.540586	FOXN1.p2	NM_001039373|Mtcp1|17763|mature T-cell proliferation 1	NM_010839|Mtcp1|17763|mature T-cell proliferation 1	U32332|Mtcp1|17763|mature T-cell proliferation 1	Z35294|Mtcp1|17763|mature T-cell proliferation 1
mm9_v1_chr2_+_83484637_83484674	0.540429	FOXN1.p2	AK005661|Zc3h15|69082|zinc finger CCCH-type containing 15	AK139511|Zc3h15|69082|zinc finger CCCH-type containing 15	AK012012|Zc3h15|69082|zinc finger CCCH-type containing 15	AK152374|Zc3h15|69082|zinc finger CCCH-type containing 15	AK167696|Zc3h15|69082|zinc finger CCCH-type containing 15	AK159596|Zc3h15|69082|zinc finger CCCH-type containing 15
mm9_v1_chr2_+_75670230_75670233	0.540074	FOXN1.p2	AK031049|Agps|228061|alkylglycerone phosphate synthase	NM_172666|Agps|228061|alkylglycerone phosphate synthase
mm9_v1_chr8_-_75094915_75095130	0.537562	FOXN1.p2	BC037511|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK152451|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK152748|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK035786|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK151539|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	NM_172396|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AF140607|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	BC055692|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK009731|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK148562|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK149156|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK169625|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK018610|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	BC060963|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK206814|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene
mm9_v1_chr11_-_59041663_59041762	0.535556	FOXN1.p2	NM_001130408|Arf1|11840|ADP-ribosylation factor 1	AK152479|Arf1|11840|ADP-ribosylation factor 1	BC021403|Arf1|11840|ADP-ribosylation factor 1	AK170586|Arf1|11840|ADP-ribosylation factor 1	AK151696|Arf1|11840|ADP-ribosylation factor 1	AK168081|Arf1|11840|ADP-ribosylation factor 1	AK167000|Arf1|11840|ADP-ribosylation factor 1	AK151821|Arf1|11840|ADP-ribosylation factor 1	AK152382|Arf1|11840|ADP-ribosylation factor 1	AK152015|Arf1|11840|ADP-ribosylation factor 1	AK167543|Arf1|11840|ADP-ribosylation factor 1	AK169166|Arf1|11840|ADP-ribosylation factor 1	D87898|Arf1|11840|ADP-ribosylation factor 1	AK170092|Arf1|11840|ADP-ribosylation factor 1	AK077542|Arf1|11840|ADP-ribosylation factor 1	AK150699|Arf1|11840|ADP-ribosylation factor 1	AK151223|Arf1|11840|ADP-ribosylation factor 1	AK159174|Arf1|11840|ADP-ribosylation factor 1	AK166628|Arf1|11840|ADP-ribosylation factor 1	AK168686|Arf1|11840|ADP-ribosylation factor 1	AK148873|Arf1|11840|ADP-ribosylation factor 1	AK167931|Arf1|11840|ADP-ribosylation factor 1	AK148458|Arf1|11840|ADP-ribosylation factor 1	AK167129|Arf1|11840|ADP-ribosylation factor 1	AK153132|Arf1|11840|ADP-ribosylation factor 1	AK150092|Arf1|11840|ADP-ribosylation factor 1	AK151225|Arf1|11840|ADP-ribosylation factor 1
mm9_v1_chr2_+_130665909_130665931	0.534272	FOXN1.p2	AK021082|C030014O09Rik|77463|RIKEN cDNA C030014O09 gene
mm9_v1_chr5_-_123974130_123974185	0.529213	FOXN1.p2	AF203914|Diablo|66593|diablo homolog (Drosophila)	AK002887|Diablo|66593|diablo homolog (Drosophila)	AK082903|Diablo|66593|diablo homolog (Drosophila)	AK169573|Diablo|66593|diablo homolog (Drosophila)	BC024780|Diablo|66593|diablo homolog (Drosophila)	AK077198|Diablo|66593|diablo homolog (Drosophila)	AK133194|Diablo|66593|diablo homolog (Drosophila)	BC054109|Diablo|66593|diablo homolog (Drosophila)	AK012760|Diablo|66593|diablo homolog (Drosophila)	NM_023232|Diablo|66593|diablo homolog (Drosophila)
mm9_v1_chr10_+_117578960_117579000	0.528938	FOXN1.p2	M20823|Mdm1|17245|transformed mouse 3T3 cell double minute 1	M20824|Mdm1|17245|transformed mouse 3T3 cell double minute 1	EU490427|Mdm1|17245|transformed mouse 3T3 cell double minute 1	EU490428|Mdm1|17245|transformed mouse 3T3 cell double minute 1
mm9_v1_chr2_-_180689380_180689413	0.527579	FOXN1.p2	BC061107|Nkain4|58237|Na+/K+ transporting ATPase interacting 4	AK021096|Nkain4|58237|Na+/K+ transporting ATPase interacting 4	NM_001141933|Nkain4|58237|Na+/K+ transporting ATPase interacting 4	NM_021426|Nkain4|58237|Na+/K+ transporting ATPase interacting 4
mm9_v1_chr4_+_43970559_43970608	0.526397	FOXN1.p2	BC031750|Glipr2|384009|GLI pathogenesis-related 2	NM_027450|Glipr2|384009|GLI pathogenesis-related 2	AK167595|Glipr2|384009|GLI pathogenesis-related 2	AK141459|Glipr2|384009|GLI pathogenesis-related 2	AK154433|Glipr2|384009|GLI pathogenesis-related 2	AK089960|Glipr2|384009|GLI pathogenesis-related 2	AK017557|Glipr2|384009|GLI pathogenesis-related 2
mm9_v1_chr9_-_99776467_99776588	0.525219	FOXN1.p2	BC069948|Sox14|20669|SRY-box containing gene 14	AK138208|Sox14|20669|SRY-box containing gene 14	BC055767|Sox14|20669|SRY-box containing gene 14	BC083360|Sox14|20669|SRY-box containing gene 14	BC100555|Sox14|20669|SRY-box containing gene 14	NM_011440|Sox14|20669|SRY-box containing gene 14
mm9_v1_chr5_-_67009992_67010044	0.523702	FOXN1.p2	AK169959|Apbb2|11787|amyloid beta (A4) precursor protein-binding, family B, member 2	AK153260|Apbb2|11787|amyloid beta (A4) precursor protein-binding, family B, member 2
mm9_v1_chr17_+_88071837_88071915	0.522355	FOXN1.p2	U21011|Msh2|17685|mutS homolog 2 (E. coli)	AK157842|Msh2|17685|mutS homolog 2 (E. coli)	BC047117|Msh2|17685|mutS homolog 2 (E. coli)	NM_008628|Msh2|17685|mutS homolog 2 (E. coli)	X81143|Msh2|17685|mutS homolog 2 (E. coli)	AK051960|Msh2|17685|mutS homolog 2 (E. coli)	AK078775|Msh2|17685|mutS homolog 2 (E. coli)	AK166179|Msh2|17685|mutS homolog 2 (E. coli)	BC050897|Msh2|17685|mutS homolog 2 (E. coli)
mm9_v1_chr14_-_54873524_54873603	0.522177	FOXN1.p2	BC053379|Dad1|13135|defender against cell death 1	AK006711|Dad1|13135|defender against cell death 1	BC024378|Dad1|13135|defender against cell death 1	AK054480|Dad1|13135|defender against cell death 1	U83628|Dad1|13135|defender against cell death 1	AK030925|Dad1|13135|defender against cell death 1	BC058116|Dad1|13135|defender against cell death 1	AK002446|Dad1|13135|defender against cell death 1	NM_001113358|Dad1|13135|defender against cell death 1	NM_010015|Dad1|13135|defender against cell death 1
mm9_v1_chr9_-_44773594_44773682	0.521716	FOXN1.p2	BC025043|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028721|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC006649|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC021406|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028850|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK172893|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	NM_145400|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)
mm9_v1_chr2_-_163470841_163470868	0.521234	FOXN1.p2	BC029026|Serinc3|26943|serine incorporator 3	BC029980|Serinc3|26943|serine incorporator 3	AK031101|Serinc3|26943|serine incorporator 3
mm9_v1_chr14_-_99498905_99499000	0.520615	FOXN1.p2	AK012840|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	BC027357|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	AK038313|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	NM_028315|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)
mm9_v1_chr2_-_118305356_118305444	0.520233	FOXN1.p2	M29264|Srp14|20813|signal recognition particle 14	AK156845|Srp14|20813|signal recognition particle 14	AK167821|Srp14|20813|signal recognition particle 14	BC021537|Srp14|20813|signal recognition particle 14	AK168144|Srp14|20813|signal recognition particle 14	AK019310|Srp14|20813|signal recognition particle 14	NM_009273|Srp14|20813|signal recognition particle 14
mm9_v1_chr15_-_51696910_51697018	0.518789	FOXN1.p2	AK177719|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	BC014755|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	NM_080635|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK167651|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK003560|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	BC091728|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK149081|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK159113|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H
mm9_v1_chr14_+_8912873_8912900	0.518109	FOXN1.p2	AK012105|Rpp14|67053|ribonuclease P 14 subunit (human)	AK016631|Rpp14|67053|ribonuclease P 14 subunit (human)	BC026988|Rpp14|67053|ribonuclease P 14 subunit (human)	BC046803|Rpp14|67053|ribonuclease P 14 subunit (human)
mm9_v1_chr1_-_182743632_182743738	0.515872	FOXN1.p2	BC106177|H3f3a|15078|H3 histone, family 3A	BC088835|H3f3a|15078|H3 histone, family 3A	BC012687|H3f3a|15078|H3 histone, family 3A	BC083353|H3f3a|15078|H3 histone, family 3A	BC002268|H3f3a|15078|H3 histone, family 3A	Z85979|H3f3a|15078|H3 histone, family 3A	AK152293|H3f3a|15078|H3 histone, family 3A	AK150591|H3f3a|15078|H3 histone, family 3A	AK150928|H3f3a|15078|H3 histone, family 3A	AK160635|H3f3a|15078|H3 histone, family 3A	AK169608|H3f3a|15078|H3 histone, family 3A	AK162040|H3f3a|15078|H3 histone, family 3A	AK153034|H3f3a|15078|H3 histone, family 3A	AK160677|H3f3a|15078|H3 histone, family 3A	AK167879|H3f3a|15078|H3 histone, family 3A	AK168197|H3f3a|15078|H3 histone, family 3A	AK150467|H3f3a|15078|H3 histone, family 3A	AK150468|H3f3a|15078|H3 histone, family 3A	AK151634|H3f3a|15078|H3 histone, family 3A	AK037900|H3f3a|15078|H3 histone, family 3A	NM_008210|H3f3a|15078|H3 histone, family 3A
mm9_v1_chr11_-_118216591_118216621	0.515578	FOXN1.p2	M82858|Timp2|21858|tissue inhibitor of metalloproteinase 2	X62622|Timp2|21858|tissue inhibitor of metalloproteinase 2	BC049126|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr9_+_57408729_57408820	0.515183	FOXN1.p2	AK003080|Scamp2|24044|secretory carrier membrane protein 2	AK161002|Scamp2|24044|secretory carrier membrane protein 2	NM_022813|Scamp2|24044|secretory carrier membrane protein 2	AF295402|Scamp2|24044|secretory carrier membrane protein 2	AK171766|Scamp2|24044|secretory carrier membrane protein 2	BC003452|Scamp2|24044|secretory carrier membrane protein 2	BC014751|Scamp2|24044|secretory carrier membrane protein 2
mm9_v1_chr14_+_21493519_21493615	0.514936	FOXN1.p2	AK036519|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	NM_001168273|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	NM_172596|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	AK011880|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	AK122199|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	BC040370|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)
mm9_v1_chr5_+_125029125_125029191	0.514866	FOXN1.p2	NM_181410|Gtf2h3|209357|general transcription factor IIH, polypeptide 3	AK050227|Gtf2h3|209357|general transcription factor IIH, polypeptide 3	BC017515|Gtf2h3|209357|general transcription factor IIH, polypeptide 3	AK133941|Gtf2h3|209357|general transcription factor IIH, polypeptide 3
mm9_v1_chr5_-_107125559_107125584	0.511526	FOXN1.p2	AK162026|Zfp644|52397|zinc finger protein 644
mm9_v1_chr9_+_66198310_66198332	0.510235	FOXN1.p2	AK083823|Herc1|235439|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1
mm9_v1_chr5_-_86601802_86601829	0.509658	FOXN1.p2	AK049603|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr5_-_141306258_141306416	0.507922	FOXN1.p2	BC111810|Gna12|14673|guanine nucleotide binding protein, alpha 12	M63659|Gna12|14673|guanine nucleotide binding protein, alpha 12	NM_010302|Gna12|14673|guanine nucleotide binding protein, alpha 12
mm9_v1_chr15_+_99532698_99532771	0.506708	FOXN1.p2	NM_031842|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC059921|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	M25773|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66620|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC079839|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr12_-_117501430_117501510	0.503793	FOXN1.p2	BC138916|Wdr60|217935|WD repeat domain 60	AK046002|Wdr60|217935|WD repeat domain 60	AK140242|Wdr60|217935|WD repeat domain 60	AK079764|Wdr60|217935|WD repeat domain 60	AK032986|Wdr60|217935|WD repeat domain 60	AK046399|Wdr60|217935|WD repeat domain 60	AK052482|Wdr60|217935|WD repeat domain 60	AK144138|Wdr60|217935|WD repeat domain 60	NM_146039|Wdr60|217935|WD repeat domain 60
mm9_v1_chr13_+_49063750_49063790	0.503474	FOXN1.p2	AK014080|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene	AK021143|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene
mm9_v1_chr10_+_84218792_84218938	0.503305	FOXN1.p2	NM_001024918|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AK034131|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AK090309|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AY102010|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AY342003|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AB086957|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)
mm9_v1_chr10_-_62486581_62486641	0.503175	FOXN1.p2	AK158707|D10Bwg1070e|52902|DNA segment, Chr 10, Brigham & Women's Genetics 1070 expressed	BC049652|Hnrnph3|432467|heterogeneous nuclear ribonucleoprotein H3	NM_001079824|Hnrnph3|432467|heterogeneous nuclear ribonucleoprotein H3	AK156477|D10Bwg1070e|52902|DNA segment, Chr 10, Brigham & Women's Genetics 1070 expressed
mm9_v1_chr9_+_106073265_106073336	0.501828	FOXN1.p2	BC094419|Wdr82|77305|WD repeat domain containing 82	BC157945|Wdr82|77305|WD repeat domain containing 82	BC158054|Wdr82|77305|WD repeat domain containing 82	BC157943|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr14_+_25309968_25309977	0.501567	FOXN1.p2	AK167874|Rps24|20088|ribosomal protein S24
mm9_v1_chr5_+_45911467_45911626	0.500494	FOXN1.p2	NM_025895|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK007855|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AF318060|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK154249|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	BC024941|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK003854|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK005681|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK201969|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)
mm9_v1_chr19_-_36994088_36994132	0.499713	FOXN1.p2	BC055778|Fgfbp3|72514|fibroblast growth factor binding protein 3	NM_028263|Fgfbp3|72514|fibroblast growth factor binding protein 3	AK167949|Fgfbp3|72514|fibroblast growth factor binding protein 3
mm9_v1_chr4_+_13670425_13670448	0.499336	FOXN1.p2	AK142006|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001111026|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr12_+_75008853_75009062	0.491221	FOXN1.p2	NM_010431|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK034087|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK150367|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK138944|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK017853|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	BC026139|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AF003695|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr9_-_59334393_59334511	0.490857	FOXN1.p2	BC057680|Arih1|23806|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm9_v1_chr1_+_92499999_92500134	0.490797	FOXN1.p2	NM_133805|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	BC021488|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK142989|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK079522|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	BC024421|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK079111|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK162502|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK090013|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK145899|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK088323|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm9_v1_chr11_+_69805051_69805216	0.487377	FOXN1.p2	BC002126|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	BC024621|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	AK002879|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	AF161587|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	BC029329|Gabarap|56486|gamma-aminobutyric acid receptor associated protein	AK011731|Gabarap|56486|gamma-aminobutyric acid receptor associated protein
mm9_v1_chr7_+_108812146_108812327	0.482783	FOXN1.p2	AK006072|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK138593|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK159314|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK154577|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK049768|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK028101|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK141383|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	U09874|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	BC048175|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	NM_009191|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK032421|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK145641|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)
mm9_v1_chr12_+_113384418_113384445	0.482321	FOXN1.p2	NM_001097621|Kif26a|668303|kinesin family member 26A
mm9_v1_chr5_-_4104696_4104696	0.478592	FOXN1.p2	NM_020010|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr16_+_16870955_16870979	0.476298	FOXN1.p2	AK146475|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr14_+_76245115_76245135	0.475738	FOXN1.p2	AK166584|Tpt1|22070|tumor protein, translationally-controlled 1	AK169730|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr14_+_115491514_115491644	0.47542	FOXN1.p2	BC115712|Gpc5|103978|glypican 5
mm9_v1_chr17_-_85489544_85489623	0.47457	FOXN1.p2	AK083070|Prepl|213760|prolyl endopeptidase-like	BC004612|Prepl|213760|prolyl endopeptidase-like	AK028877|Prepl|213760|prolyl endopeptidase-like	AK163108|Prepl|213760|prolyl endopeptidase-like	AK020557|Prepl|213760|prolyl endopeptidase-like	AK050878|Prepl|213760|prolyl endopeptidase-like	NM_001163622|Prepl|213760|prolyl endopeptidase-like	NM_001163623|Prepl|213760|prolyl endopeptidase-like	NM_145984|Prepl|213760|prolyl endopeptidase-like	NM_001163624|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr2_+_160471623_160471632	0.473514	FOXN1.p2	AK145538|Top1|21969|topoisomerase (DNA) I	NM_009408|Top1|21969|topoisomerase (DNA) I
mm9_v1_chr12_+_106923552_106923650	0.471903	FOXN1.p2	NM_178613|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK171097|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	BC031494|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK168962|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK042664|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK079775|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK020785|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK029484|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene
mm9_v1_chr8_-_87956606_87956658	0.471722	FOXN1.p2	AK007050|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK013123|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	BC040087|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene
mm9_v1_chr3_+_102824561_102824586	0.471688	FOXN1.p2	AK145351|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr2_-_180689328_180689372	0.46615	FOXN1.p2	EF058055|Nkain4|58237|Na+/K+ transporting ATPase interacting 4	EF058056|Nkain4|58237|Na+/K+ transporting ATPase interacting 4	EF058057|Nkain4|58237|Na+/K+ transporting ATPase interacting 4	BC089330|Nkain4|58237|Na+/K+ transporting ATPase interacting 4	AB030182|Nkain4|58237|Na+/K+ transporting ATPase interacting 4	AK007632|Nkain4|58237|Na+/K+ transporting ATPase interacting 4	AK005262|Nkain4|58237|Na+/K+ transporting ATPase interacting 4
mm9_v1_chr17_-_29374656_29374735	0.465176	FOXN1.p2	AK147529|Cpne5|240058|copine V	AK044042|Cpne5|240058|copine V	NM_153166|Cpne5|240058|copine V	BC036971|Cpne5|240058|copine V
mm9_v1_chr1_+_23768764_23768872	0.464007	FOXN1.p2	AK052640|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	NM_172124|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	AB055902|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	AK048146|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	AK220433|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	BC056368|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	BC058082|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm9_v1_chr3_+_68298129_68298184	0.461578	FOXN1.p2	AK146930|Schip1|30953|schwannomin interacting protein 1	AK168005|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr13_+_49777464_49777562	0.46113	FOXN1.p2	NM_172015|Iars|105148|isoleucine-tRNA synthetase	BC067029|Iars|105148|isoleucine-tRNA synthetase	AK087992|Iars|105148|isoleucine-tRNA synthetase	AK133856|Iars|105148|isoleucine-tRNA synthetase	AK136132|Iars|105148|isoleucine-tRNA synthetase
mm9_v1_chr6_+_54545104_54545338	0.460596	FOXN1.p2	AK078040|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001164361|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK170592|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chr11_+_100943878_100943967	0.459581	FOXN1.p2	AK004878|Coasy|71743|Coenzyme A synthase	AK170330|Coasy|71743|Coenzyme A synthase	AK159405|Coasy|71743|Coenzyme A synthase	AK159912|Coasy|71743|Coenzyme A synthase	NM_027896|Coasy|71743|Coenzyme A synthase	AK166894|Coasy|71743|Coenzyme A synthase
mm9_v1_chr8_-_89409079_89409204	0.457824	FOXN1.p2	AK134934|N4bp1|80750|NEDD4 binding protein 1	AK172981|N4bp1|80750|NEDD4 binding protein 1	AK147522|N4bp1|80750|NEDD4 binding protein 1	NM_030563|N4bp1|80750|NEDD4 binding protein 1
mm9_v1_chr5_-_115750998_115751012	0.454221	FOXN1.p2	NM_019682|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr7_+_87377748_87377824	0.453863	FOXN1.p2	AK166345|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK143704|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK085577|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK086166|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	NM_178752|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK084531|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	BC037479|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene
mm9_v1_chr13_-_99696254_99696340	0.453356	FOXN1.p2	AK030580|Tnpo1|238799|transportin 1	AK087194|Tnpo1|238799|transportin 1	AK037001|Tnpo1|238799|transportin 1	AK029953|Tnpo1|238799|transportin 1	NM_178716|Tnpo1|238799|transportin 1
mm9_v1_chr14_+_56364551_56364563	0.45139	FOXN1.p2	AK152732|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK159798|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK146687|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene
mm9_v1_chr3_+_65470149_65470220	0.450354	FOXN1.p2	NM_001166659|Lekr1|624866|leucine, glutamate and lysine rich 1	NM_001037923|Lekr1|624866|leucine, glutamate and lysine rich 1	AK137452|Lekr1|624866|leucine, glutamate and lysine rich 1	BC147278|Lekr1|624866|leucine, glutamate and lysine rich 1	BC147279|Lekr1|624866|leucine, glutamate and lysine rich 1
mm9_v1_chr3_+_41368846_41368849	0.447571	FOXN1.p2	AK129445|Phf17|269424|PHD finger protein 17
mm9_v1_chr19_+_46150352_46150506	0.445824	FOXN1.p2	NM_001039351|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	NM_001039352|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	NM_001039353|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	NM_053086|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	AK166753|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	AK014336|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	AK034817|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	AK147118|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	AK029150|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	AK150332|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	AK151031|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	AK152941|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1	BC003244|Nolc1|70769|nucleolar and coiled-body phosphoprotein 1
mm9_v1_chr1_-_39634096_39634285	0.445601	FOXN1.p2	BC115968|Rnf149|67702|ring finger protein 149	NM_001033135|Rnf149|67702|ring finger protein 149	AK155360|Rnf149|67702|ring finger protein 149
mm9_v1_chr2_-_180869947_180869970	0.445197	FOXN1.p2	AK161558|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2
mm9_v1_chr5_+_36807807_36807839	0.444571	FOXN1.p2	AK161688|Grpel1|17713|GrpE-like 1, mitochondrial	AK048732|Grpel1|17713|GrpE-like 1, mitochondrial	NM_024478|Grpel1|17713|GrpE-like 1, mitochondrial	AK089113|Grpel1|17713|GrpE-like 1, mitochondrial	AK050445|Grpel1|17713|GrpE-like 1, mitochondrial
mm9_v1_chr1_+_59030365_59030647	0.442561	FOXN1.p2	AK140272|Stradb|227154|STE20-related kinase adaptor beta	NM_172656|Stradb|227154|STE20-related kinase adaptor beta	AK036678|Stradb|227154|STE20-related kinase adaptor beta	BC055814|Stradb|227154|STE20-related kinase adaptor beta	AK046790|Stradb|227154|STE20-related kinase adaptor beta	AK080096|Stradb|227154|STE20-related kinase adaptor beta	AK035207|Stradb|227154|STE20-related kinase adaptor beta	AK086974|Stradb|227154|STE20-related kinase adaptor beta	BC037003|Stradb|227154|STE20-related kinase adaptor beta	BC060956|Stradb|227154|STE20-related kinase adaptor beta	AK146079|Stradb|227154|STE20-related kinase adaptor beta	AB057666|Stradb|227154|STE20-related kinase adaptor beta	AB057667|Stradb|227154|STE20-related kinase adaptor beta
mm9_v1_chr9_-_110556645_110556664	0.442079	FOXN1.p2	BC157956|Nbeal2|235627|neurobeachin-like 2	BC172118|Nbeal2|235627|neurobeachin-like 2	NM_183276|Nbeal2|235627|neurobeachin-like 2
mm9_v1_chr1_-_167167019_167167127	0.441555	FOXN1.p2	BC058250|Tiprl|226591|TIP41, TOR signalling pathway regulator-like (S. cerevisiae)	BC002098|Tiprl|226591|TIP41, TOR signalling pathway regulator-like (S. cerevisiae)	AK049119|Tiprl|226591|TIP41, TOR signalling pathway regulator-like (S. cerevisiae)	AK075774|Tiprl|226591|TIP41, TOR signalling pathway regulator-like (S. cerevisiae)	AK049784|Tiprl|226591|TIP41, TOR signalling pathway regulator-like (S. cerevisiae)	NM_145513|Tiprl|226591|TIP41, TOR signalling pathway regulator-like (S. cerevisiae)
mm9_v1_chr16_-_85173918_85173926	0.440166	FOXN1.p2	AK161976|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr3_+_108394195_108394337	0.437227	FOXN1.p2	NM_181400|Wdr47|99512|WD repeat domain 47	AK047357|Wdr47|99512|WD repeat domain 47	AK163422|Wdr47|99512|WD repeat domain 47	BC040337|Wdr47|99512|WD repeat domain 47
mm9_v1_chr2_+_131036131_131036175	0.436136	FOXN1.p2	AK009634|2310035K24Rik|69596|RIKEN cDNA 2310035K24 gene	AK002807|2310035K24Rik|69596|RIKEN cDNA 2310035K24 gene	BC048399|2310035K24Rik|69596|RIKEN cDNA 2310035K24 gene	NM_027129|2310035K24Rik|69596|RIKEN cDNA 2310035K24 gene
mm9_v1_chr11_-_87800799_87801034	0.434348	FOXN1.p2	AK028319|Dynll2|68097|dynein light chain LC8-type 2	BC011289|Dynll2|68097|dynein light chain LC8-type 2	BC058797|Dynll2|68097|dynein light chain LC8-type 2	BC040822|Dynll2|68097|dynein light chain LC8-type 2	AK011284|Dynll2|68097|dynein light chain LC8-type 2	AK160114|Dynll2|68097|dynein light chain LC8-type 2	AK049645|Dynll2|68097|dynein light chain LC8-type 2	AK078434|Dynll2|68097|dynein light chain LC8-type 2	AK169212|Dynll2|68097|dynein light chain LC8-type 2	NM_026556|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr11_-_102417457_102417523	0.430914	FOXN1.p2	AK135410|Gpatch8|237943|G patch domain containing 8	NM_001159492|Gpatch8|237943|G patch domain containing 8
mm9_v1_chr5_-_90795190_90795275	0.430116	FOXN1.p2	AK031350|Ankrd17|81702|ankyrin repeat domain 17	NM_030886|Ankrd17|81702|ankyrin repeat domain 17	NM_198010|Ankrd17|81702|ankyrin repeat domain 17
mm9_v1_chr16_-_45724720_45724763	0.429201	FOXN1.p2	AK012333|Tagln3|56370|transgelin 3
mm9_v1_chrX_+_131120189_131120255	0.428037	FOXN1.p2	NM_019865|Rpl36a|19982|ribosomal protein L36A	AK002540|Rpl36a|19982|ribosomal protein L36A	AK170127|Rpl36a|19982|ribosomal protein L36A	AK168535|Rpl36a|19982|ribosomal protein L36A	AK012502|Rpl36a|19982|ribosomal protein L36A	AK164483|Rpl36a|19982|ribosomal protein L36A	BC027515|Rpl36a|19982|ribosomal protein L36A	BC086777|Rpl36a|19982|ribosomal protein L36A
mm9_v1_chr2_-_9969885_9970221	0.427391	FOXN1.p2	AK033848|Taf3|209361|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AJ292189|Taf3|209361|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC089030|Taf3|209361|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC137617|Taf3|209361|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC137618|Taf3|209361|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC039989|Taf3|209361|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC094546|Taf3|209361|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr7_+_135110992_135111067	0.425036	FOXN1.p2	NM_139149|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK132141|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK134491|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK146198|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK149118|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK145582|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK032815|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK038226|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK139960|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK172554|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	BC058247|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	BC011078|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	BC040827|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AF224264|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)
mm9_v1_chr11_-_59653240_59653315	0.424307	FOXN1.p2	AK142318|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	AK048906|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	AF071313|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	BC068179|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	NM_011991|Cops3|26572|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
mm9_v1_chr15_-_85412250_85412299	0.42374	FOXN1.p2	BC058398|Wnt7b|22422|wingless-related MMTV integration site 7B	NM_009528|Wnt7b|22422|wingless-related MMTV integration site 7B
mm9_v1_chr10_-_108448003_108448027	0.423318	FOXN1.p2	BC048187|Syt1|20979|synaptotagmin I	AK019304|Syt1|20979|synaptotagmin I	AK048973|Syt1|20979|synaptotagmin I	AK133578|Syt1|20979|synaptotagmin I
mm9_v1_chr6_+_4853319_4853431	0.420978	FOXN1.p2	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr10_-_33343965_33344073	0.41891	FOXN1.p2	AK049896|Clvs2|215890|clavesin 2	AK049988|Clvs2|215890|clavesin 2
mm9_v1_chr7_-_36181628_36181850	0.418565	FOXN1.p2	BC096687|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK153918|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK082457|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	NM_178643|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK040248|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK031566|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK166481|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene
mm9_v1_chr18_-_10610315_10610349	0.416417	FOXN1.p2	AK145333|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	NM_001081222|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm9_v1_chr13_-_14155631_14155710	0.415247	FOXN1.p2	BC006798|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK132907|Ggps1|14593|geranylgeranyl diphosphate synthase 1	BC069913|Ggps1|14593|geranylgeranyl diphosphate synthase 1	NM_010282|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK007605|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK089026|Ggps1|14593|geranylgeranyl diphosphate synthase 1	AK011980|Ggps1|14593|geranylgeranyl diphosphate synthase 1
mm9_v1_chr15_-_98398066_98398161	0.414693	FOXN1.p2	AF087662|Ccnt1|12455|cyclin T1	AF095640|Ccnt1|12455|cyclin T1	AF109179|Ccnt1|12455|cyclin T1	AF113951|Ccnt1|12455|cyclin T1	BC131685|Ccnt1|12455|cyclin T1	BC131686|Ccnt1|12455|cyclin T1	NM_009833|Ccnt1|12455|cyclin T1	AK083037|Ccnt1|12455|cyclin T1
mm9_v1_chr11_+_87881747_87881842	0.413152	FOXN1.p2	AF104410|Vezf1|22344|vascular endothelial zinc finger 1	NM_016686|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr11_+_120582777_120582942	0.412439	FOXN1.p2	AK150203|Rac3|170758|RAS-related C3 botulinum substrate 3	NM_133223|Rac3|170758|RAS-related C3 botulinum substrate 3	AK089930|Rac3|170758|RAS-related C3 botulinum substrate 3	BC117028|Rac3|170758|RAS-related C3 botulinum substrate 3	BC119041|Rac3|170758|RAS-related C3 botulinum substrate 3	AB040819|Rac3|170758|RAS-related C3 botulinum substrate 3	AY974601|Rac3|170758|RAS-related C3 botulinum substrate 3
mm9_v1_chr14_+_47896669_47896817	0.408998	FOXN1.p2	BC057159|Socs4|67296|suppressor of cytokine signaling 4	AK014115|Socs4|67296|suppressor of cytokine signaling 4	NM_080843|Socs4|67296|suppressor of cytokine signaling 4
mm9_v1_chr2_+_91551067_91551117	0.407242	FOXN1.p2	AK147045|Harbi1|241547|harbinger transposase derived 1	AK084226|Harbi1|241547|harbinger transposase derived 1	AK080671|Harbi1|241547|harbinger transposase derived 1	BC094315|Harbi1|241547|harbinger transposase derived 1	NM_178724|Harbi1|241547|harbinger transposase derived 1	AK045343|Harbi1|241547|harbinger transposase derived 1
mm9_v1_chr19_-_44144244_44144286	0.406737	FOXN1.p2	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr17_-_30713105_30713132	0.403212	FOXN1.p2	BC057897|Btbd9|224671|BTB (POZ) domain containing 9	AK052664|Btbd9|224671|BTB (POZ) domain containing 9	AK087881|Btbd9|224671|BTB (POZ) domain containing 9
mm9_v1_chr1_-_90102270_90102322	0.401107	FOXN1.p2	AK005690|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	AK005688|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	BC048490|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_008299|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	U95607|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3
mm9_v1_chr2_-_151566894_151566981	0.400339	FOXN1.p2	BC131928|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	BC131930|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1
mm9_v1_chr7_+_146038021_146038054	0.399561	FOXN1.p2	AK129386|Ppp2r2d|52432|protein phosphatase 2, regulatory subunit B, delta isoform	AK011198|Ppp2r2d|52432|protein phosphatase 2, regulatory subunit B, delta isoform
mm9_v1_chr13_-_65214222_65214309	0.398465	FOXN1.p2	BC033469|Hiatl1|66631|hippocampus abundant transcript-like 1	AK090174|Hiatl1|66631|hippocampus abundant transcript-like 1	AK146596|Hiatl1|66631|hippocampus abundant transcript-like 1	NM_001083901|Hiatl1|66631|hippocampus abundant transcript-like 1	NM_133680|Hiatl1|66631|hippocampus abundant transcript-like 1
mm9_v1_chr16_-_14159346_14159388	0.397946	FOXN1.p2	AK158881|4921513D23Rik|223989|RIKEN cDNA 4921513D23 gene	NM_001081154|4921513D23Rik|223989|RIKEN cDNA 4921513D23 gene
mm9_v1_chr2_+_157105002_157105058	0.397457	FOXN1.p2	AK161624|Rpn2|20014|ribophorin II	AK166778|Rpn2|20014|ribophorin II	AK167864|Rpn2|20014|ribophorin II	AK167866|Rpn2|20014|ribophorin II	AK168221|Rpn2|20014|ribophorin II
mm9_v1_chr12_+_107022903_107023027	0.396695	FOXN1.p2	NM_011112|Papola|18789|poly (A) polymerase alpha	AK028940|Papola|18789|poly (A) polymerase alpha	AK090096|Papola|18789|poly (A) polymerase alpha	AK132704|Papola|18789|poly (A) polymerase alpha	AK134552|Papola|18789|poly (A) polymerase alpha	BC060128|Papola|18789|poly (A) polymerase alpha	U58134|Papola|18789|poly (A) polymerase alpha	U52197|Papola|18789|poly (A) polymerase alpha
mm9_v1_chr2_+_11093739_11093765	0.396146	FOXN1.p2	AK085546|Prkcq|18761|protein kinase C, theta
mm9_v1_chr3_+_102824510_102824537	0.392214	FOXN1.p2	AK146586|Csde1|229663|cold shock domain containing E1, RNA binding	AK147012|Csde1|229663|cold shock domain containing E1, RNA binding	AK151723|Csde1|229663|cold shock domain containing E1, RNA binding	AK151970|Csde1|229663|cold shock domain containing E1, RNA binding	AK144097|Csde1|229663|cold shock domain containing E1, RNA binding	BC029688|Csde1|229663|cold shock domain containing E1, RNA binding	AK151638|Csde1|229663|cold shock domain containing E1, RNA binding	AK152531|Csde1|229663|cold shock domain containing E1, RNA binding	AK168556|Csde1|229663|cold shock domain containing E1, RNA binding	AK159258|Csde1|229663|cold shock domain containing E1, RNA binding	AK159863|Csde1|229663|cold shock domain containing E1, RNA binding	AK146706|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr9_-_107192203_107192207	0.392111	FOXN1.p2	AK170456|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	BC031467|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	NM_178907|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3
mm9_v1_chr2_+_157563136_157563225	0.391968	FOXN1.p2	NM_025680|Ctnnbl1|66642|catenin, beta like 1	BC050787|Ctnnbl1|66642|catenin, beta like 1	AY009405|Ctnnbl1|66642|catenin, beta like 1	AK145888|Ctnnbl1|66642|catenin, beta like 1	AK146274|Ctnnbl1|66642|catenin, beta like 1	AK145147|Ctnnbl1|66642|catenin, beta like 1	AK077616|Ctnnbl1|66642|catenin, beta like 1	AK145598|Ctnnbl1|66642|catenin, beta like 1	AK145719|Ctnnbl1|66642|catenin, beta like 1	AK044690|Ctnnbl1|66642|catenin, beta like 1	AK010547|Ctnnbl1|66642|catenin, beta like 1
mm9_v1_chr10_-_60915513_60915586	0.391746	FOXN1.p2	BC015082|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	AK148374|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr9_+_14664653_14664697	0.391507	FOXN1.p2	AK035356|Gpr83|14608|G protein-coupled receptor 83	AK041527|Gpr83|14608|G protein-coupled receptor 83	AK081276|Gpr83|14608|G protein-coupled receptor 83	M80481|Gpr83|14608|G protein-coupled receptor 83	NM_010287|Gpr83|14608|G protein-coupled receptor 83
mm9_v1_chr19_-_5912757_5912865	0.390809	FOXN1.p2	U10435|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK215194|Dpf2|19708|D4, zinc and double PHD fingers family 2	BC012709|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK138047|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144848|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK019051|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144106|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK004812|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144954|Dpf2|19708|D4, zinc and double PHD fingers family 2	U43921|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK145851|Dpf2|19708|D4, zinc and double PHD fingers family 2	NM_011262|Dpf2|19708|D4, zinc and double PHD fingers family 2
mm9_v1_chr1_+_64579358_64579513	0.390662	FOXN1.p2	NM_001037726|Creb1|12912|cAMP responsive element binding protein 1	NM_009952|Creb1|12912|cAMP responsive element binding protein 1	NM_133828|Creb1|12912|cAMP responsive element binding protein 1	AK079223|Creb1|12912|cAMP responsive element binding protein 1	X92497|Creb1|12912|cAMP responsive element binding protein 1	AK042595|Creb1|12912|cAMP responsive element binding protein 1	BC021649|Creb1|12912|cAMP responsive element binding protein 1	M95106|Creb1|12912|cAMP responsive element binding protein 1	AF448507|Creb1|12912|cAMP responsive element binding protein 1
mm9_v1_chr3_+_108086993_108087000	0.388399	FOXN1.p2	AK147442|Sort1|20661|sortilin 1
mm9_v1_chr1_-_174136874_174136913	0.388139	FOXN1.p2	NM_011063|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr11_+_30854457_30854463	0.386374	FOXN1.p2	AK010315|Asb3|65257|ankyrin repeat and SOCS box-containing 3	BC023086|Asb3|65257|ankyrin repeat and SOCS box-containing 3
mm9_v1_chr10_+_127472624_127472720	0.386188	FOXN1.p2	AK169432|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK146197|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AL355707|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK168023|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	U48364|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK146149|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK168169|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK151928|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK169435|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK161678|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC029830|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC083340|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	AK168607|Naca|17938|nascent polypeptide-associated complex alpha polypeptide
mm9_v1_chr9_-_4309446_4309517	0.385163	FOXN1.p2	AK013111|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK076099|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK010557|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK028700|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC038013|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC049851|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK008554|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC030043|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK144671|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK076866|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK014188|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK029523|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK081818|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK031766|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK088977|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK007737|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	NM_026276|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
mm9_v1_chr18_+_36894692_36894835	0.383794	FOXN1.p2	AK046207|Tmco6|71983|transmembrane and coiled-coil domains 6	BC005637|Tmco6|71983|transmembrane and coiled-coil domains 6	NM_028036|Tmco6|71983|transmembrane and coiled-coil domains 6	AK164554|Tmco6|71983|transmembrane and coiled-coil domains 6	AK010487|Tmco6|71983|transmembrane and coiled-coil domains 6
mm9_v1_chr1_-_75475845_75475926	0.382767	FOXN1.p2	BC071273|Chpf|74241|chondroitin polymerizing factor	BC057050|Chpf|74241|chondroitin polymerizing factor	BC060598|Chpf|74241|chondroitin polymerizing factor
mm9_v1_chr9_-_107775011_107775029	0.382026	FOXN1.p2	AK220446|Rbm6|19654|RNA binding motif protein 6	AJ006486|Rbm6|19654|RNA binding motif protein 6	BC026130|Rbm6|19654|RNA binding motif protein 6
mm9_v1_chr2_-_153458365_153458496	0.381787	FOXN1.p2	AK177311|Commd7|99311|COMM domain containing 7	BC065794|Commd7|99311|COMM domain containing 7	AK164805|Commd7|99311|COMM domain containing 7	BC092215|Commd7|99311|COMM domain containing 7	BC003310|Commd7|99311|COMM domain containing 7	AK077349|Commd7|99311|COMM domain containing 7	AK089926|Commd7|99311|COMM domain containing 7	AK169037|Commd7|99311|COMM domain containing 7	AK046582|Commd7|99311|COMM domain containing 7	AK008447|Commd7|99311|COMM domain containing 7	BC094216|Commd7|99311|COMM domain containing 7	AK078774|Commd7|99311|COMM domain containing 7	AK009274|Commd7|99311|COMM domain containing 7
mm9_v1_chr19_+_36908807_36908893	0.381206	FOXN1.p2	AK047094|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AK163335|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm9_v1_chr15_+_100299408_100299504	0.37775	FOXN1.p2	NM_134093|Letmd1|68614|LETM1 domain containing 1	AK158718|Letmd1|68614|LETM1 domain containing 1
mm9_v1_chr16_+_16870878_16870901	0.376743	FOXN1.p2	BC006614|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr5_+_145901253_145901281	0.376383	FOXN1.p2	BC057025|Bud31|231889|BUD31 homolog (yeast)	NM_001008705|Bud31|231889|BUD31 homolog (yeast)	BC006861|Bud31|231889|BUD31 homolog (yeast)
mm9_v1_chr14_-_75347637_75347721	0.376116	FOXN1.p2	AK129264|Lrch1|380916|leucine-rich repeats and calponin homology (CH) domain containing 1	AK143909|Lrch1|380916|leucine-rich repeats and calponin homology (CH) domain containing 1	NM_001033439|Lrch1|380916|leucine-rich repeats and calponin homology (CH) domain containing 1
mm9_v1_chr14_+_52899216_52899320	0.374219	FOXN1.p2	AK041829|Tox4|268741|TOX high mobility group box family member 4	AK042459|Tox4|268741|TOX high mobility group box family member 4	AK147023|Tox4|268741|TOX high mobility group box family member 4	AK173012|Tox4|268741|TOX high mobility group box family member 4	AK147834|Tox4|268741|TOX high mobility group box family member 4	AK088144|Tox4|268741|TOX high mobility group box family member 4	AK153278|Tox4|268741|TOX high mobility group box family member 4	BC050091|Tox4|268741|TOX high mobility group box family member 4
mm9_v1_chrX_+_147955201_147955234	0.372756	FOXN1.p2	AK040969|Phf8|320595|PHD finger protein 8	NM_001113354|Phf8|320595|PHD finger protein 8	NM_177201|Phf8|320595|PHD finger protein 8
mm9_v1_chr2_+_53051140_53051188	0.36951	FOXN1.p2	AK016267|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK032740|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK052010|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK082824|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	BC019550|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK159990|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK011070|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AF133913|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6
mm9_v1_chrX_-_153929935_153930011	0.366607	FOXN1.p2	AK017775|Sms|20603|spermine synthase	Y09419|Sms|20603|spermine synthase	BC046623|Sms|20603|spermine synthase	AF031486|Sms|20603|spermine synthase	AK049787|Sms|20603|spermine synthase	AK160637|Sms|20603|spermine synthase	AK149929|Sms|20603|spermine synthase	AK002687|Sms|20603|spermine synthase	AK049780|Sms|20603|spermine synthase	AK136798|Sms|20603|spermine synthase	AK011542|Sms|20603|spermine synthase	AK160659|Sms|20603|spermine synthase	NM_009214|Sms|20603|spermine synthase	AK166665|Sms|20603|spermine synthase
mm9_v1_chr11_-_120685860_120685860	0.36602	FOXN1.p2	NM_007988|Fasn|14104|fatty acid synthase
mm9_v1_chr12_+_114378688_114378782	0.366014	FOXN1.p2	AF469648|Crip2|68337|cysteine rich protein 2	BC002093|Crip2|68337|cysteine rich protein 2	AK002484|Crip2|68337|cysteine rich protein 2	BC002096|Crip2|68337|cysteine rich protein 2	BC007149|Crip2|68337|cysteine rich protein 2	CT010309|Crip2|68337|cysteine rich protein 2
mm9_v1_chr17_+_85489991_85490039	0.365956	FOXN1.p2	AK155246|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene	NM_028576|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene
mm9_v1_chrX_+_96331496_96331657	0.365521	FOXN1.p2	BC021656|Efnb1|13641|ephrin B1	BC006797|Efnb1|13641|ephrin B1	Z48781|Efnb1|13641|ephrin B1	BC018572|Efnb1|13641|ephrin B1
mm9_v1_chr5_-_138596915_138596971	0.363319	FOXN1.p2	BC052453|Zfp113|56314|zinc finger protein 113	BC054525|Zfp113|56314|zinc finger protein 113	BC056991|Zfp113|56314|zinc finger protein 113	AF167320|Zfp113|56314|zinc finger protein 113	AK076349|Zfp113|56314|zinc finger protein 113	AK220556|Zfp113|56314|zinc finger protein 113	NM_019747|Zfp113|56314|zinc finger protein 113
mm9_v1_chr2_+_32251976_32252050	0.362583	FOXN1.p2	AK182234|Ptges2|96979|prostaglandin E synthase 2
mm9_v1_chr4_-_148800321_148800361	0.361078	FOXN1.p2	AK083409|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	AK029914|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm9_v1_chr10_-_38853662_38853700	0.360835	FOXN1.p2	BC094255|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene	AK006431|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene	AK006353|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene	NM_183254|1700025K23Rik|66337|RIKEN cDNA 1700025K23 gene
mm9_v1_chr2_+_22924699_22924786	0.360355	FOXN1.p2	BC084584|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr14_-_19103447_19103585	0.359825	FOXN1.p2	BC081441|Rpl15|66480|ribosomal protein L15	BC079842|Rpl15|66480|ribosomal protein L15	AK012423|Rpl15|66480|ribosomal protein L15	AK151138|Rpl15|66480|ribosomal protein L15	AK152711|Rpl15|66480|ribosomal protein L15	AK169662|Rpl15|66480|ribosomal protein L15	AK002234|Rpl15|66480|ribosomal protein L15	AK012025|Rpl15|66480|ribosomal protein L15	AK167996|Rpl15|66480|ribosomal protein L15	AK159183|Rpl15|66480|ribosomal protein L15	AK159626|Rpl15|66480|ribosomal protein L15	AK010674|Rpl15|66480|ribosomal protein L15	AK010319|Rpl15|66480|ribosomal protein L15	AK010916|Rpl15|66480|ribosomal protein L15	AK010931|Rpl15|66480|ribosomal protein L15	AK168125|Rpl15|66480|ribosomal protein L15	NM_025586|Rpl15|66480|ribosomal protein L15	BC087917|Rpl15|66480|ribosomal protein L15
mm9_v1_chr4_-_134828699_134828733	0.35609	FOXN1.p2	AK170942|Clic4|29876|chloride intracellular channel 4 (mitochondrial)
mm9_v1_chr3_+_103718466_103718512	0.355664	FOXN1.p2	AK138603|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC069993|Rsbn1|229675|rosbin, round spermatid basic protein 1	AK122577|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC094667|Rsbn1|229675|rosbin, round spermatid basic protein 1
mm9_v1_chr12_+_8320219_8320268	0.355548	FOXN1.p2	AK040654|Hs1bp3|58240|HCLS1 binding protein 3	NM_021429|Hs1bp3|58240|HCLS1 binding protein 3	AK154696|Hs1bp3|58240|HCLS1 binding protein 3	AK084802|Hs1bp3|58240|HCLS1 binding protein 3	AK170838|Hs1bp3|58240|HCLS1 binding protein 3	BC095977|Hs1bp3|58240|HCLS1 binding protein 3	AJ132192|Hs1bp3|58240|HCLS1 binding protein 3
mm9_v1_chr6_+_125045998_125046234	0.352412	FOXN1.p2	AK147695|Chd4|107932|chromodomain helicase DNA binding protein 4	AK040005|Chd4|107932|chromodomain helicase DNA binding protein 4	AK132004|Chd4|107932|chromodomain helicase DNA binding protein 4	BC058578|Chd4|107932|chromodomain helicase DNA binding protein 4	NM_145979|Chd4|107932|chromodomain helicase DNA binding protein 4	AK145532|Chd4|107932|chromodomain helicase DNA binding protein 4
mm9_v1_chr8_+_108404773_108404850	0.352356	FOXN1.p2	AK152963|Edc4|234699|enhancer of mRNA decapping 4	AK146527|Edc4|234699|enhancer of mRNA decapping 4	BC053081|Edc4|234699|enhancer of mRNA decapping 4	NM_181594|Edc4|234699|enhancer of mRNA decapping 4
mm9_v1_chr3_+_96439352_96439425	0.352346	FOXN1.p2	NM_001162387|Pex11b|18632|peroxisomal biogenesis factor 11 beta	NM_011069|Pex11b|18632|peroxisomal biogenesis factor 11 beta	AK082778|Pex11b|18632|peroxisomal biogenesis factor 11 beta
mm9_v1_chr2_-_128513089_128513155	0.352065	FOXN1.p2	BC057201|Anapc1|17222|anaphase promoting complex subunit 1	AK149762|Anapc1|17222|anaphase promoting complex subunit 1	AK052404|Anapc1|17222|anaphase promoting complex subunit 1	AK053383|Anapc1|17222|anaphase promoting complex subunit 1	AK090134|Anapc1|17222|anaphase promoting complex subunit 1	AK054305|Anapc1|17222|anaphase promoting complex subunit 1	BC139002|Anapc1|17222|anaphase promoting complex subunit 1	BC145492|Anapc1|17222|anaphase promoting complex subunit 1	AK164804|Anapc1|17222|anaphase promoting complex subunit 1	X80169|Anapc1|17222|anaphase promoting complex subunit 1	AK077847|Anapc1|17222|anaphase promoting complex subunit 1	NM_008569|Anapc1|17222|anaphase promoting complex subunit 1
mm9_v1_chr17_+_36003527_36003630	0.350679	FOXN1.p2	NM_175242|2310014H01Rik|76448|RIKEN cDNA 2310014H01 gene	AK051656|2310014H01Rik|76448|RIKEN cDNA 2310014H01 gene
mm9_v1_chr8_+_108535363_108535459	0.348057	FOXN1.p2	AK009391|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)	AK077451|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)	NM_025518|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)	BC116934|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)	BC116936|Dus2l|66369|dihydrouridine synthase 2-like (SMM1, S. cerevisiae)
mm9_v1_chr11_-_100621034_100621091	0.347958	FOXN1.p2	BC150990|Kcnh4|380728|potassium voltage-gated channel, subfamily H (eag-related), member 4	BC150994|Kcnh4|380728|potassium voltage-gated channel, subfamily H (eag-related), member 4	NM_001081194|Kcnh4|380728|potassium voltage-gated channel, subfamily H (eag-related), member 4
mm9_v1_chr5_-_107125618_107125653	0.347587	FOXN1.p2	AK144865|Zfp644|52397|zinc finger protein 644
mm9_v1_chr7_-_53086135_53086313	0.347365	FOXN1.p2	BC008121|Grwd1|101612|glutamate-rich WD repeat containing 1	BC083143|Grwd1|101612|glutamate-rich WD repeat containing 1	BC028896|Grwd1|101612|glutamate-rich WD repeat containing 1	NM_153419|Grwd1|101612|glutamate-rich WD repeat containing 1	AK077611|Grwd1|101612|glutamate-rich WD repeat containing 1	AB001539|Grwd1|101612|glutamate-rich WD repeat containing 1
mm9_v1_chr6_+_116287992_116288071	0.347362	FOXN1.p2	AK154976|March8|71779|membrane-associated ring finger (C3HC4) 8	BC050908|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chrX_+_20937988_20937991	0.345541	FOXN1.p2	AK032684|Gm5124|331392|predicted pseudogene 5124	NM_198633|Gm5124|331392|predicted pseudogene 5124
mm9_v1_chr1_-_55144687_55144775	0.343562	FOXN1.p2	AK088844|Hspd1|15510|heat shock protein 1 (chaperonin)	AK146831|Hspd1|15510|heat shock protein 1 (chaperonin)	NM_010477|Hspd1|15510|heat shock protein 1 (chaperonin)
mm9_v1_chr4_+_40669478_40669634	0.343277	FOXN1.p2	NM_008298|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	AK049963|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	AK145963|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	AK083046|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	AK167139|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	AK167212|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	AF055664|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	BC057876|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	BC158024|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1
mm9_v1_chr8_-_114400574_114400649	0.343251	FOXN1.p2	AK018496|Tmem170|66817|transmembrane protein 170	NM_025781|Tmem170|66817|transmembrane protein 170	AK007926|Tmem170|66817|transmembrane protein 170	BC139377|Tmem170|66817|transmembrane protein 170	BC145964|Tmem170|66817|transmembrane protein 170
mm9_v1_chr9_+_66198234_66198299	0.341267	FOXN1.p2	AK047003|Herc1|235439|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	NM_145617|Herc1|235439|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1
mm9_v1_chr19_-_5098486_5098495	0.340943	FOXN1.p2	BC103797|Cnih2|12794|cornichon homolog 2 (Drosophila)
mm9_v1_chr10_-_99949933_99949987	0.340465	FOXN1.p2	AK044857|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	AK149759|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	AK158192|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	AK165838|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	NM_001033332|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	NM_001110013|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3
mm9_v1_chr14_-_57397125_57397185	0.339458	FOXN1.p2	BC026772|Pspc1|66645|paraspeckle protein 1	AK011272|Pspc1|66645|paraspeckle protein 1	AK017689|Pspc1|66645|paraspeckle protein 1	AK150823|Pspc1|66645|paraspeckle protein 1	AK160722|Pspc1|66645|paraspeckle protein 1	NM_025682|Pspc1|66645|paraspeckle protein 1
mm9_v1_chr5_-_144493077_144493148	0.338117	FOXN1.p2	NM_029749|Usp42|76800|ubiquitin specific peptidase 42
mm9_v1_chr6_-_39067918_39068240	0.336653	FOXN1.p2	AK162200|Parp12|243771|poly (ADP-ribose) polymerase family, member 12	BC120733|Parp12|243771|poly (ADP-ribose) polymerase family, member 12	BC137645|Parp12|243771|poly (ADP-ribose) polymerase family, member 12	AK156623|Parp12|243771|poly (ADP-ribose) polymerase family, member 12
mm9_v1_chr2_+_35516774_35517011	0.335566	FOXN1.p2	AY305656|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr9_+_110034489_110034583	0.333318	FOXN1.p2	NM_009211|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK143485|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK144122|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK133922|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U85614|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK144631|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK145352|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK042194|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC056375|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC052423|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC053064|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC022173|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm9_v1_chr1_-_173211220_173211350	0.332998	FOXN1.p2	AK134341|Ppox|19044|protoporphyrinogen oxidase	AK142632|Ppox|19044|protoporphyrinogen oxidase	BC002047|Ppox|19044|protoporphyrinogen oxidase	U25114|Ppox|19044|protoporphyrinogen oxidase	NM_008911|Ppox|19044|protoporphyrinogen oxidase
mm9_v1_chr8_-_92872139_92872206	0.331522	FOXN1.p2	AK082602|Tox3|244579|TOX high mobility group box family member 3	NM_172913|Tox3|244579|TOX high mobility group box family member 3
mm9_v1_chr3_+_85378033_85378116	0.331084	FOXN1.p2	AK166231|Pet112l|229487|PET112-like (yeast)	AK053978|Pet112l|229487|PET112-like (yeast)	AK081800|Pet112l|229487|PET112-like (yeast)	BC005709|Pet112l|229487|PET112-like (yeast)	AK034702|Pet112l|229487|PET112-like (yeast)	NM_144896|Pet112l|229487|PET112-like (yeast)	AK028193|Pet112l|229487|PET112-like (yeast)	AK134831|Pet112l|229487|PET112-like (yeast)
mm9_v1_chr17_+_56109922_56110011	0.330581	FOXN1.p2	AK164639|Shd|20420|src homology 2 domain-containing transforming protein D	BC103798|Shd|20420|src homology 2 domain-containing transforming protein D
mm9_v1_chr9_+_118415358_118415568	0.330196	FOXN1.p2	AK161568|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AK172292|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC037641|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AF051357|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC003268|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC096467|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	NM_018748|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC023102|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC057561|Golga4|54214|golgi autoantigen, golgin subfamily a, 4
mm9_v1_chr2_-_121632749_121632811	0.329938	FOXN1.p2	AK054484|Frmd5|228564|FERM domain containing 5	BC062889|Frmd5|228564|FERM domain containing 5	AK146383|Frmd5|228564|FERM domain containing 5	AK048865|Frmd5|228564|FERM domain containing 5	NM_172673|Frmd5|228564|FERM domain containing 5
mm9_v1_chrX_+_55283804_55283819	0.328589	FOXN1.p2	AK139364|Zic3|22773|zinc finger protein of the cerebellum 3	NM_009575|Zic3|22773|zinc finger protein of the cerebellum 3
mm9_v1_chr4_-_45333366_45333502	0.32661	FOXN1.p2	AK006281|Exosc3|66362|exosome component 3	BC023669|Exosc3|66362|exosome component 3	BC054085|Exosc3|66362|exosome component 3	NM_025513|Exosc3|66362|exosome component 3	AK012689|Exosc3|66362|exosome component 3
mm9_v1_chr6_+_115551903_115551958	0.326145	FOXN1.p2	BC025547|Mkrn2|67027|makorin, ring finger protein, 2	AK009515|Mkrn2|67027|makorin, ring finger protein, 2	AK077926|Mkrn2|67027|makorin, ring finger protein, 2	NM_023290|Mkrn2|67027|makorin, ring finger protein, 2
mm9_v1_chr1_+_89652595_89652635	0.325264	FOXN1.p2	AK134333|Atg16l1|77040|autophagy-related 16-like 1 (yeast)
mm9_v1_chrX_-_50946805_50946943	0.324975	FOXN1.p2	BC003436|Cxx1a|66158|CAAX box 1 homolog A (human)	AK002323|Cxx1a|66158|CAAX box 1 homolog A (human)	NM_024170|Cxx1a|66158|CAAX box 1 homolog A (human)
mm9_v1_chr4_-_81088575_81088736	0.324641	FOXN1.p2	AJ131869|Mpdz|17475|multiple PDZ domain protein	NM_010820|Mpdz|17475|multiple PDZ domain protein	AK051782|Mpdz|17475|multiple PDZ domain protein	AK160603|Mpdz|17475|multiple PDZ domain protein
mm9_v1_chr4_+_140857147_140857182	0.3242	FOXN1.p2	AK137704|Epha2|13836|Eph receptor A2	AK144202|Epha2|13836|Eph receptor A2	NM_010139|Epha2|13836|Eph receptor A2	U07634|Epha2|13836|Eph receptor A2	BC140960|Epha2|13836|Eph receptor A2	X78339|Epha2|13836|Eph receptor A2
mm9_v1_chr15_-_73253659_73253720	0.323833	FOXN1.p2	AY916078|Ptk2|14083|PTK2 protein tyrosine kinase 2	DQ478406|Ptk2|14083|PTK2 protein tyrosine kinase 2	DQ478407|Ptk2|14083|PTK2 protein tyrosine kinase 2
mm9_v1_chr9_+_122026424_122026492	0.323565	FOXN1.p2	BC094658|Snrk|20623|SNF related kinase	BC020189|Snrk|20623|SNF related kinase
mm9_v1_chr19_+_3768021_3768138	0.322239	FOXN1.p2	AY555192|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK082660|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK054093|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm9_v1_chr5_-_139060952_139060970	0.32065	FOXN1.p2	AB024005|Zfp68|24135|zinc finger protein 68	BC018171|Zfp68|24135|zinc finger protein 68	AK013868|Zfp68|24135|zinc finger protein 68	NM_001044747|Zfp68|24135|zinc finger protein 68	NM_001163797|Zfp68|24135|zinc finger protein 68	NM_013844|Zfp68|24135|zinc finger protein 68
mm9_v1_chr7_-_54387915_54388047	0.32046	FOXN1.p2	NM_001163565|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	BC079592|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr14_-_62175545_62175639	0.316918	FOXN1.p2	BC037015|6330409N04Rik|66674|RIKEN cDNA 6330409N04 gene	AK167306|6330409N04Rik|66674|RIKEN cDNA 6330409N04 gene	AK169059|6330409N04Rik|66674|RIKEN cDNA 6330409N04 gene	AK018290|6330409N04Rik|66674|RIKEN cDNA 6330409N04 gene	AK137685|6330409N04Rik|66674|RIKEN cDNA 6330409N04 gene	AK150789|6330409N04Rik|66674|RIKEN cDNA 6330409N04 gene	AK018044|6330409N04Rik|66674|RIKEN cDNA 6330409N04 gene
mm9_v1_chr19_-_5098381_5098484	0.315965	FOXN1.p2	BC137585|Cnih2|12794|cornichon homolog 2 (Drosophila)	BC137586|Cnih2|12794|cornichon homolog 2 (Drosophila)	BC144739|Cnih2|12794|cornichon homolog 2 (Drosophila)	AB006191|Cnih2|12794|cornichon homolog 2 (Drosophila)	NM_009920|Cnih2|12794|cornichon homolog 2 (Drosophila)
mm9_v1_chr2_+_83484686_83484734	0.315938	FOXN1.p2	AK050782|Zc3h15|69082|zinc finger CCCH-type containing 15	BC031845|Zc3h15|69082|zinc finger CCCH-type containing 15	NM_026934|Zc3h15|69082|zinc finger CCCH-type containing 15
mm9_v1_chr11_+_102110161_102110288	0.315644	FOXN1.p2	NM_153544|BC030867|217216|cDNA sequence BC030867	AK029811|BC030867|217216|cDNA sequence BC030867	BC030867|BC030867|217216|cDNA sequence BC030867	BC108338|BC030867|217216|cDNA sequence BC030867	BC085317|BC030867|217216|cDNA sequence BC030867
mm9_v1_chr14_+_84843366_84843370	0.314763	FOXN1.p2	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr7_-_133709900_133709929	0.314554	FOXN1.p2	BC025032|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK013160|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK009925|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK088076|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK166743|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C
mm9_v1_chr4_-_11003327_11003375	0.314434	FOXN1.p2	AK009547|2310030N02Rik|76947|RIKEN cDNA 2310030N02 gene	AK041507|2310030N02Rik|76947|RIKEN cDNA 2310030N02 gene	NM_001085493|2310030N02Rik|76947|RIKEN cDNA 2310030N02 gene
mm9_v1_chr11_-_69485842_69485924	0.314165	FOXN1.p2	NM_001159375|Eif4a1|13681|eukaryotic translation initiation factor 4A1	NM_144958|Eif4a1|13681|eukaryotic translation initiation factor 4A1
mm9_v1_chr3_-_14611203_14611220	0.313726	FOXN1.p2	BC115807|1810022K09Rik|69126|RIKEN cDNA 1810022K09 gene
mm9_v1_chr10_-_108447996_108448001	0.313331	FOXN1.p2	AK013798|Syt1|20979|synaptotagmin I	AK078790|Syt1|20979|synaptotagmin I
mm9_v1_chr3_+_108087046_108087050	0.31278	FOXN1.p2	BC056343|Sort1|20661|sortilin 1	NM_019972|Sort1|20661|sortilin 1
mm9_v1_chr7_+_140968543_140968573	0.312425	FOXN1.p2	AY819025|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1	AK017071|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1	AK005694|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1	BC046278|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1	NM_025850|Fank1|66930|fibronectin type 3 and ankyrin repeat domains 1
mm9_v1_chr17_-_46766302_46766478	0.312036	FOXN1.p2	AF531873|Ptk7|71461|PTK7 protein tyrosine kinase 7	AK053044|Ptk7|71461|PTK7 protein tyrosine kinase 7	AK087891|Ptk7|71461|PTK7 protein tyrosine kinase 7	AK163135|Ptk7|71461|PTK7 protein tyrosine kinase 7	BC076578|Ptk7|71461|PTK7 protein tyrosine kinase 7	NM_175168|Ptk7|71461|PTK7 protein tyrosine kinase 7
mm9_v1_chr8_-_19893102_19893120	0.310311	FOXN1.p2	AK030539|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK088897|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene
mm9_v1_chr3_+_121977291_121977338	0.309916	FOXN1.p2	AK133904|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	AK168536|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	AK135957|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	BC028305|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	NM_153806|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	AK016368|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2
mm9_v1_chr11_+_17157549_17157664	0.307748	FOXN1.p2	X95591|C1d|57316|C1D nuclear receptor co-repressor	AK028702|C1d|57316|C1D nuclear receptor co-repressor	AK035169|C1d|57316|C1D nuclear receptor co-repressor	NM_020558|C1d|57316|C1D nuclear receptor co-repressor	BC005436|C1d|57316|C1D nuclear receptor co-repressor
mm9_v1_chr13_-_8995234_8995327	0.306355	FOXN1.p2	AK163372|Gtpbp4|69237|GTP binding protein 4	BC005514|Gtpbp4|69237|GTP binding protein 4	AF325354|Gtpbp4|69237|GTP binding protein 4	BC025431|Gtpbp4|69237|GTP binding protein 4	AK164330|Gtpbp4|69237|GTP binding protein 4	NM_027000|Gtpbp4|69237|GTP binding protein 4	AK166711|Gtpbp4|69237|GTP binding protein 4	AF348208|Gtpbp4|69237|GTP binding protein 4	AK011580|Gtpbp4|69237|GTP binding protein 4	AK141852|Gtpbp4|69237|GTP binding protein 4
mm9_v1_chr4_+_58956460_58956499	0.305284	FOXN1.p2	NM_001099323|Zkscan16|100041581|zinc finger with KRAB and SCAN domains 16
mm9_v1_chr15_-_75812067_75812212	0.305048	FOXN1.p2	AK205415|2410075B13Rik|223648|RIKEN cDNA 2410075B13 gene
mm9_v1_chr4_-_129419450_129419570	0.304391	FOXN1.p2	BC002051|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	U17046|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK146815|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	U17961|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK150687|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK152084|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	NM_011317|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK044927|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK050520|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK137122|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1
mm9_v1_chr4_+_116381175_116381228	0.30428	FOXN1.p2	AK002768|Ccdc163|68394|coiled-coil domain containing 163	AK016995|Ccdc163|68394|coiled-coil domain containing 163
mm9_v1_chr16_-_32003226_32003372	0.303837	FOXN1.p2	AK158338|Senp5|320213|SUMO/sentrin specific peptidase 5	AY522918|Senp5|320213|SUMO/sentrin specific peptidase 5	BC080830|Senp5|320213|SUMO/sentrin specific peptidase 5	AK043171|Senp5|320213|SUMO/sentrin specific peptidase 5	AK042087|Senp5|320213|SUMO/sentrin specific peptidase 5	AK028177|Senp5|320213|SUMO/sentrin specific peptidase 5	NM_177103|Senp5|320213|SUMO/sentrin specific peptidase 5
mm9_v1_chr2_-_174289526_174289563	0.300552	FOXN1.p2	BC046612|Atp5e|67126|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
mm9_v1_chr2_+_109731003_109731053	0.299693	FOXN1.p2	AK135810|Lin7c|22343|lin-7 homolog C (C. elegans)	AK083299|Lin7c|22343|lin-7 homolog C (C. elegans)	AK015399|Lin7c|22343|lin-7 homolog C (C. elegans)	AK078923|Lin7c|22343|lin-7 homolog C (C. elegans)	AK128989|Lin7c|22343|lin-7 homolog C (C. elegans)	BC052471|Lin7c|22343|lin-7 homolog C (C. elegans)	AK133531|Lin7c|22343|lin-7 homolog C (C. elegans)	AF173083|Lin7c|22343|lin-7 homolog C (C. elegans)	AF087695|Lin7c|22343|lin-7 homolog C (C. elegans)	BC046966|Lin7c|22343|lin-7 homolog C (C. elegans)	NM_011699|Lin7c|22343|lin-7 homolog C (C. elegans)	AK161076|Lin7c|22343|lin-7 homolog C (C. elegans)
mm9_v1_chr16_-_31274947_31275377	0.297059	FOXN1.p2	AK015349|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK053657|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC069886|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK002671|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK032462|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK028603|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC069885|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK150281|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_025800|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm9_v1_chr15_+_81702875_81703029	0.29699	FOXN1.p2	NM_080633|Aco2|11429|aconitase 2, mitochondrial	AK143917|Aco2|11429|aconitase 2, mitochondrial	AK145511|Aco2|11429|aconitase 2, mitochondrial	AK150027|Aco2|11429|aconitase 2, mitochondrial	AK150954|Aco2|11429|aconitase 2, mitochondrial	AK165411|Aco2|11429|aconitase 2, mitochondrial	BC094462|Aco2|11429|aconitase 2, mitochondrial	AK029122|LOC100504340|100504340|hypothetical protein LOC100504340
mm9_v1_chr16_+_32914183_32914232	0.296914	FOXN1.p2	AK155550|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	NM_001081255|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK076529|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC151058|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC157924|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC172144|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK133482|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3
mm9_v1_chr10_-_62113923_62113962	0.295093	FOXN1.p2	BC055440|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	AF334104|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	NM_053183|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	BC049906|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	AK162423|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
mm9_v1_chr4_-_131817388_131817463	0.294519	FOXN1.p2	BC046983|Gmeb1|56809|glucocorticoid modulatory element binding protein 1	AK134349|Gmeb1|56809|glucocorticoid modulatory element binding protein 1	NM_001122992|Gmeb1|56809|glucocorticoid modulatory element binding protein 1	NM_020273|Gmeb1|56809|glucocorticoid modulatory element binding protein 1
mm9_v1_chr11_-_60988490_60988572	0.293999	FOXN1.p2	AK220368|Usp22|216825|ubiquitin specific peptidase 22	AK040187|Usp22|216825|ubiquitin specific peptidase 22	AK034492|Usp22|216825|ubiquitin specific peptidase 22	AK155071|Usp22|216825|ubiquitin specific peptidase 22	NM_001004143|Usp22|216825|ubiquitin specific peptidase 22
mm9_v1_chr11_+_82577835_82577869	0.292929	FOXN1.p2	AK008475|Zfp830|66983|zinc finger protein 830	AK132497|Zfp830|66983|zinc finger protein 830	NM_025884|Zfp830|66983|zinc finger protein 830	AK148058|Zfp830|66983|zinc finger protein 830	AK050043|Zfp830|66983|zinc finger protein 830	AK010353|Zfp830|66983|zinc finger protein 830	AK167656|Zfp830|66983|zinc finger protein 830	BC024340|Zfp830|66983|zinc finger protein 830	AK168417|Zfp830|66983|zinc finger protein 830	AK017640|Zfp830|66983|zinc finger protein 830
mm9_v1_chr5_-_122822329_122822391	0.29243	FOXN1.p2	BC019498|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	AK005211|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	AK150218|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene
mm9_v1_chr5_-_77334487_77334538	0.29238	FOXN1.p2	BC094507|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK217387|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK038779|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK043807|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK136849|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK148405|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	NM_173765|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase
mm9_v1_chr13_+_54723144_54723248	0.291904	FOXN1.p2	NM_178397|Faf2|76577|Fas associated factor family member 2	AK170111|Faf2|76577|Fas associated factor family member 2	AK171922|Faf2|76577|Fas associated factor family member 2	AK051724|Faf2|76577|Fas associated factor family member 2	BC046817|Faf2|76577|Fas associated factor family member 2	AK148529|Faf2|76577|Fas associated factor family member 2	AK151617|Faf2|76577|Fas associated factor family member 2	BC048767|Faf2|76577|Fas associated factor family member 2	AK122394|Faf2|76577|Fas associated factor family member 2
mm9_v1_chr4_+_24825226_24825304	0.291592	FOXN1.p2	NM_026742|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK160341|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK034728|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK019042|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	BC028764|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK003553|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4
mm9_v1_chr12_-_80190607_80190656	0.291175	FOXN1.p2	BC086806|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK030744|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK020902|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK167892|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	NM_029988|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H
mm9_v1_chr5_+_31916313_31916404	0.290594	FOXN1.p2	NM_025796|Mrpl33|66845|mitochondrial ribosomal protein L33	AB049651|Mrpl33|66845|mitochondrial ribosomal protein L33	AK167883|Mrpl33|66845|mitochondrial ribosomal protein L33	AK002421|Mrpl33|66845|mitochondrial ribosomal protein L33	AK008431|Mrpl33|66845|mitochondrial ribosomal protein L33	AK021173|Mrpl33|66845|mitochondrial ribosomal protein L33	AK165856|Mrpl33|66845|mitochondrial ribosomal protein L33	BC059722|Mrpl33|66845|mitochondrial ribosomal protein L33	BC051471|Mrpl33|66845|mitochondrial ribosomal protein L33	BC027018|Mrpl33|66845|mitochondrial ribosomal protein L33	BC037363|Mrpl33|66845|mitochondrial ribosomal protein L33	BC055724|Mrpl33|66845|mitochondrial ribosomal protein L33	AK041771|Mrpl33|66845|mitochondrial ribosomal protein L33	BC006029|Mrpl33|66845|mitochondrial ribosomal protein L33
mm9_v1_chr9_+_114597854_114597998	0.289586	FOXN1.p2	AK082950|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	AK159702|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	BC023347|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	NM_146229|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1
mm9_v1_chr8_-_108535317_108535385	0.287174	FOXN1.p2	AK010396|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	AK163480|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC058568|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120556|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120582|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	NM_028038|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
mm9_v1_chr19_-_36993636_36993708	0.285852	FOXN1.p2	DQ503577|Fgfbp3|72514|fibroblast growth factor binding protein 3
mm9_v1_chr3_+_137527448_137527565	0.284053	FOXN1.p2	AK088704|H2afz|51788|H2A histone family, member Z	AK146181|H2afz|51788|H2A histone family, member Z	BC079903|H2afz|51788|H2A histone family, member Z	AK143572|H2afz|51788|H2A histone family, member Z	AK151052|H2afz|51788|H2A histone family, member Z	AK151509|H2afz|51788|H2A histone family, member Z	AK152848|H2afz|51788|H2A histone family, member Z	AK168178|H2afz|51788|H2A histone family, member Z	AK169003|H2afz|51788|H2A histone family, member Z	AY074806|H2afz|51788|H2A histone family, member Z	AK028176|H2afz|51788|H2A histone family, member Z	AK150454|H2afz|51788|H2A histone family, member Z	AK151462|H2afz|51788|H2A histone family, member Z	AK151868|H2afz|51788|H2A histone family, member Z	AK152398|H2afz|51788|H2A histone family, member Z	NM_016750|H2afz|51788|H2A histone family, member Z	U70494|H2afz|51788|H2A histone family, member Z	AK212062|H2afz|51788|H2A histone family, member Z
mm9_v1_chr2_+_153567020_153567113	0.283542	FOXN1.p2	NM_007896|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC043333|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK154245|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK013626|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	U51196|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK146206|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC052728|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC064444|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1
mm9_v1_chr9_+_107904919_107905018	0.283067	FOXN1.p2	AK172921|Ip6k1|27399|inositol hexaphosphate kinase 1	AK037925|Ip6k1|27399|inositol hexaphosphate kinase 1	AK088872|Ip6k1|27399|inositol hexaphosphate kinase 1	BC053030|Ip6k1|27399|inositol hexaphosphate kinase 1	AK171310|Ip6k1|27399|inositol hexaphosphate kinase 1	AK166143|Ip6k1|27399|inositol hexaphosphate kinase 1	BC059006|Ip6k1|27399|inositol hexaphosphate kinase 1	NM_013785|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr1_-_38954933_38955026	0.282814	FOXN1.p2	BC056956|Chst10|98388|carbohydrate sulfotransferase 10	AK047378|Chst10|98388|carbohydrate sulfotransferase 10	NM_145142|Chst10|98388|carbohydrate sulfotransferase 10	AK050676|Chst10|98388|carbohydrate sulfotransferase 10
mm9_v1_chr8_+_74116052_74116115	0.28179	FOXN1.p2	AK044914|Pgls|66171|6-phosphogluconolactonase	AK003985|Pgls|66171|6-phosphogluconolactonase	AK036059|Pgls|66171|6-phosphogluconolactonase	NM_025396|Pgls|66171|6-phosphogluconolactonase	AK172066|Pgls|66171|6-phosphogluconolactonase	AK003134|Pgls|66171|6-phosphogluconolactonase	AK028344|Pgls|66171|6-phosphogluconolactonase	BC006594|Pgls|66171|6-phosphogluconolactonase
mm9_v1_chr7_-_140900737_140900782	0.28173	FOXN1.p2	AK145902|Uros|22276|uroporphyrinogen III synthase	AK164297|Uros|22276|uroporphyrinogen III synthase	U18867|Uros|22276|uroporphyrinogen III synthase	AK002971|Uros|22276|uroporphyrinogen III synthase	BC068161|Uros|22276|uroporphyrinogen III synthase	AK135314|Uros|22276|uroporphyrinogen III synthase
mm9_v1_chr2_+_154262114_154262265	0.279759	FOXN1.p2	AK148027|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_009823|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_172860|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK040403|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	DQ213025|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC064679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK049206|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chr4_-_135577545_135577644	0.279082	FOXN1.p2	AB025015|Tceb3|27224|transcription elongation factor B (SIII), polypeptide 3	AK147088|Tceb3|27224|transcription elongation factor B (SIII), polypeptide 3	BC049885|Tceb3|27224|transcription elongation factor B (SIII), polypeptide 3	AK036592|Tceb3|27224|transcription elongation factor B (SIII), polypeptide 3	AK145994|Tceb3|27224|transcription elongation factor B (SIII), polypeptide 3	NM_013736|Tceb3|27224|transcription elongation factor B (SIII), polypeptide 3
mm9_v1_chr2_-_120178819_120178881	0.278798	FOXN1.p2	BC007479|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281050|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281051|Vps39|269338|vacuolar protein sorting 39 (yeast)	AB028844|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK141424|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK038824|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK042253|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK154103|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK170831|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK171008|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK159889|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK160109|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK084743|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_147153|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_178851|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK140041|Vps39|269338|vacuolar protein sorting 39 (yeast)
mm9_v1_chr2_+_3035692_3035956	0.278552	FOXN1.p2	BC138175|Fam171a1|269233|family with sequence similarity 171, member A1	BC145171|Fam171a1|269233|family with sequence similarity 171, member A1	AK077831|Fam171a1|269233|family with sequence similarity 171, member A1
mm9_v1_chr8_+_23171187_23171223	0.277855	FOXN1.p2	NM_183142|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	AK157746|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	AK046475|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	BC061469|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	AK134312|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)
mm9_v1_chr7_-_31935974_31936116	0.277396	FOXN1.p2	AK150032|Gramd1a|52857|GRAM domain containing 1A	AK150196|Gramd1a|52857|GRAM domain containing 1A	AK150837|Gramd1a|52857|GRAM domain containing 1A	AK151987|Gramd1a|52857|GRAM domain containing 1A	AK152294|Gramd1a|52857|GRAM domain containing 1A	AK083837|Gramd1a|52857|GRAM domain containing 1A	AK004885|Gramd1a|52857|GRAM domain containing 1A	AK154821|Gramd1a|52857|GRAM domain containing 1A	NM_027898|Gramd1a|52857|GRAM domain containing 1A
mm9_v1_chr3_+_102824458_102824505	0.276878	FOXN1.p2	NM_001161854|Csde1|229663|cold shock domain containing E1, RNA binding	NM_144901|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr8_+_85689250_85689250	0.274299	FOXN1.p2	AK049049|Tbc1d9|71310|TBC1 domain family, member 9	NM_001111304|Tbc1d9|71310|TBC1 domain family, member 9	NM_027758|Tbc1d9|71310|TBC1 domain family, member 9
mm9_v1_chr1_-_186635045_186635085	0.273066	FOXN1.p2	AK011722|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1	AK004989|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1
mm9_v1_chr14_-_58508974_58509153	0.270429	FOXN1.p2	AK020965|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AY668951|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK170139|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK031184|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK139216|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK140182|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK049270|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK163174|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK017158|Zdhhc20|75965|zinc finger, DHHC domain containing 20	NM_029492|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK151840|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK170017|Zdhhc20|75965|zinc finger, DHHC domain containing 20	BC019536|Zdhhc20|75965|zinc finger, DHHC domain containing 20
mm9_v1_chr11_-_69485800_69485832	0.270157	FOXN1.p2	BC099392|Eif4a1|13681|eukaryotic translation initiation factor 4A1	BC012282|Eif4a1|13681|eukaryotic translation initiation factor 4A1	BC049915|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169030|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166527|Eif4a1|13681|eukaryotic translation initiation factor 4A1	X03039|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK159643|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167205|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK168697|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169156|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK011529|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK077429|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK135752|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK135994|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK144850|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK146464|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166439|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167003|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167083|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167988|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK168780|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169023|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169057|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169279|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166572|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK088124|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK145375|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK145508|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK146424|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK152694|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK162017|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166674|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167196|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167906|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK010644|Eif4a1|13681|eukaryotic translation initiation factor 4A1
mm9_v1_chr11_-_118216689_118216724	0.268792	FOXN1.p2	NM_011594|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr17_-_56856195_56856299	0.268388	FOXN1.p2	AK145854|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	AK078549|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	AK170944|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein
mm9_v1_chr4_-_131909543_131909559	0.268293	FOXN1.p2	AJ006837|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3	AK076188|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3
mm9_v1_chr4_+_149611305_149611392	0.268011	FOXN1.p2	NM_023119|Eno1|13806|enolase 1, alpha non-neuron	AK002336|Eno1|13806|enolase 1, alpha non-neuron	AK014335|Eno1|13806|enolase 1, alpha non-neuron	AK147987|Eno1|13806|enolase 1, alpha non-neuron	AK150161|Eno1|13806|enolase 1, alpha non-neuron	AK150192|Eno1|13806|enolase 1, alpha non-neuron	AK153321|Eno1|13806|enolase 1, alpha non-neuron	AK002322|Eno1|13806|enolase 1, alpha non-neuron	BC003934|Eno1|13806|enolase 1, alpha non-neuron	AK204692|Eno1|13806|enolase 1, alpha non-neuron	AK088788|Eno1|13806|enolase 1, alpha non-neuron	X52379|Eno1|13806|enolase 1, alpha non-neuron	BC003891|Eno1|13806|enolase 1, alpha non-neuron	BC010685|Eno1|13806|enolase 1, alpha non-neuron	BC083334|Eno1|13806|enolase 1, alpha non-neuron	BC024644|Eno1|13806|enolase 1, alpha non-neuron	BC039179|Eno1|13806|enolase 1, alpha non-neuron
mm9_v1_chr11_+_98603186_98603266	0.267968	FOXN1.p2	AK078233|Thra|21833|thyroid hormone receptor alpha	NM_178060|Thra|21833|thyroid hormone receptor alpha	BC046795|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chrX_+_71528035_71528145	0.26714	FOXN1.p2	NM_001173547|Taz|66826|tafazzin	NM_181516|Taz|66826|tafazzin	AK172563|Taz|66826|tafazzin	AK019872|Taz|66826|tafazzin	AK076481|Taz|66826|tafazzin	AK160327|Taz|66826|tafazzin	AK170662|Taz|66826|tafazzin	AK004035|Taz|66826|tafazzin	AK075615|Taz|66826|tafazzin	BC015305|Taz|66826|tafazzin
mm9_v1_chr4_-_33037783_33037814	0.266808	FOXN1.p2	AK135024|Ankrd6|140577|ankyrin repeat domain 6	NM_001012451|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr4_+_117222924_117223239	0.266502	FOXN1.p2	AK144107|Eri3|140546|exoribonuclease 3	BC096545|Eri3|140546|exoribonuclease 3	AK083017|Eri3|140546|exoribonuclease 3	NM_080469|Eri3|140546|exoribonuclease 3	BC116685|Eri3|140546|exoribonuclease 3	BC117540|Eri3|140546|exoribonuclease 3
mm9_v1_chr9_+_120019498_120019516	0.266195	FOXN1.p2	AK078385|Slc25a38|208638|solute carrier family 25, member 38	BC010801|Slc25a38|208638|solute carrier family 25, member 38	NM_144793|Slc25a38|208638|solute carrier family 25, member 38
mm9_v1_chr17_-_71824652_71824682	0.266187	FOXN1.p2	AK078494|Smchd1|74355|SMC hinge domain containing 1	NM_028887|Smchd1|74355|SMC hinge domain containing 1
mm9_v1_chr2_+_21127350_21127413	0.264839	FOXN1.p2	AK029518|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_001001297|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_177588|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK083895|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK033465|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK087148|Thnsl1|208967|threonine synthase-like 1 (bacterial)
mm9_v1_chr9_+_119311561_119311618	0.26459	FOXN1.p2	BC106189|Acvr2b|11481|activin receptor IIB	M84120|Acvr2b|11481|activin receptor IIB	NM_007397|Acvr2b|11481|activin receptor IIB
mm9_v1_chr10_+_7400978_7401034	0.263207	FOXN1.p2	AK038612|Lats1|16798|large tumor suppressor	NM_010690|Lats1|16798|large tumor suppressor	BC158123|Lats1|16798|large tumor suppressor
mm9_v1_chr6_+_125142154_125142245	0.262862	FOXN1.p2	AK007615|Mrpl51|66493|mitochondrial ribosomal protein L51	AK012524|Mrpl51|66493|mitochondrial ribosomal protein L51	AK076130|Mrpl51|66493|mitochondrial ribosomal protein L51	BC094621|Mrpl51|66493|mitochondrial ribosomal protein L51	AK007256|Mrpl51|66493|mitochondrial ribosomal protein L51	AK010268|Mrpl51|66493|mitochondrial ribosomal protein L51	NM_025595|Mrpl51|66493|mitochondrial ribosomal protein L51	AK012126|Mrpl51|66493|mitochondrial ribosomal protein L51	BC021535|Mrpl51|66493|mitochondrial ribosomal protein L51	AK011966|Mrpl51|66493|mitochondrial ribosomal protein L51	BC100602|Mrpl51|66493|mitochondrial ribosomal protein L51	AB049960|Mrpl51|66493|mitochondrial ribosomal protein L51
mm9_v1_chr9_-_72833159_72833188	0.26122	FOXN1.p2	BC099568|Gm5918|546143|predicted gene 5918	BC048630|Gm5918|546143|predicted gene 5918	NM_001198789|Gm5918|546143|predicted gene 5918	AK145722|Gm5918|546143|predicted gene 5918
mm9_v1_chr4_+_122673318_122673349	0.26025	FOXN1.p2	AK146959|Mycl1|16918|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC053059|Mycl1|16918|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC089346|Mycl1|16918|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_008506|Mycl1|16918|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
mm9_v1_chr5_+_144090975_144090986	0.258857	FOXN1.p2	AK002861|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene	AK009603|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene	AK144491|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene
mm9_v1_chr12_-_88784769_88784966	0.254647	FOXN1.p2	BC050856|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC094381|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK012518|Nrp|654309|neural regeneration protein	AK143105|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK042102|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK049549|Nrp|654309|neural regeneration protein	AK144828|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	NM_001102565|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC119399|Nrp|654309|neural regeneration protein	BC119401|Nrp|654309|neural regeneration protein	AY753183|Nrp|654309|neural regeneration protein	NM_001013372|Nrp|654309|neural regeneration protein
mm9_v1_chr5_+_130647678_130647743	0.253856	FOXN1.p2	NM_001199059|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	AF093590|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	AK146734|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr7_-_133709864_133709898	0.253056	FOXN1.p2	BC024855|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	NM_146200|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK168160|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK168174|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK076165|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK152693|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK160078|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C
mm9_v1_chrX_-_71674201_71674273	0.253053	FOXN1.p2	Z11911|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	AK088135|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	AK148031|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	AK165207|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked
mm9_v1_chr13_-_8870231_8870293	0.253045	FOXN1.p2	AK129254|Wdr37|207615|WD repeat domain 37	AK032582|Wdr37|207615|WD repeat domain 37	AK146209|Wdr37|207615|WD repeat domain 37	AK014128|Wdr37|207615|WD repeat domain 37	AK044740|Wdr37|207615|WD repeat domain 37	AK036203|Wdr37|207615|WD repeat domain 37	NM_001039389|Wdr37|207615|WD repeat domain 37	NM_172445|Wdr37|207615|WD repeat domain 37
mm9_v1_chr2_-_168032561_168032640	0.250412	FOXN1.p2	NM_009628|Adnp|11538|activity-dependent neuroprotective protein	AK129214|Adnp|11538|activity-dependent neuroprotective protein
mm9_v1_chr11_+_104987738_104987813	0.250071	FOXN1.p2	AK048040|Mettl2|52686|methyltransferase like 2	NM_172567|Mettl2|52686|methyltransferase like 2	AK030739|Mettl2|52686|methyltransferase like 2	AK133887|Mettl2|52686|methyltransferase like 2	BC089591|Mettl2|52686|methyltransferase like 2	AK153431|Mettl2|52686|methyltransferase like 2
mm9_v1_chr9_+_123022332_123022396	0.249056	FOXN1.p2	BC132363|Exosc7|66446|exosome component 7	BC145675|Exosc7|66446|exosome component 7	NM_001081188|Exosc7|66446|exosome component 7	AK085426|Exosc7|66446|exosome component 7	AK011294|Exosc7|66446|exosome component 7	BC039655|Exosc7|66446|exosome component 7	BC052656|Exosc7|66446|exosome component 7	AK129057|Exosc7|66446|exosome component 7
mm9_v1_chr4_+_122513481_122513506	0.248962	FOXN1.p2	AK151107|Ppt1|19063|palmitoyl-protein thioesterase 1	AK152940|Ppt1|19063|palmitoyl-protein thioesterase 1	NM_008917|Ppt1|19063|palmitoyl-protein thioesterase 1	AK152474|Ppt1|19063|palmitoyl-protein thioesterase 1	AK014561|Ppt1|19063|palmitoyl-protein thioesterase 1	AK153106|Ppt1|19063|palmitoyl-protein thioesterase 1	AK153316|Ppt1|19063|palmitoyl-protein thioesterase 1	AK171668|Ppt1|19063|palmitoyl-protein thioesterase 1	AF087568|Ppt1|19063|palmitoyl-protein thioesterase 1	AK169658|Ppt1|19063|palmitoyl-protein thioesterase 1	AK151055|Ppt1|19063|palmitoyl-protein thioesterase 1	AK148314|Ppt1|19063|palmitoyl-protein thioesterase 1	AF326557|Ppt1|19063|palmitoyl-protein thioesterase 1	AF326558|Ppt1|19063|palmitoyl-protein thioesterase 1	AK169579|Ppt1|19063|palmitoyl-protein thioesterase 1
mm9_v1_chr12_+_45429966_45429998	0.24887	FOXN1.p2	AJ543321|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr14_-_67691221_67691310	0.248	FOXN1.p2	BC080692|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK161704|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK167530|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK220192|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK161507|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	NM_028032|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK010380|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	BC065100|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK090027|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK164497|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK167189|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform
mm9_v1_chr2_-_136942066_136942255	0.244927	FOXN1.p2	NM_013822|Jag1|16449|jagged 1	AK137092|Jag1|16449|jagged 1	AF171092|Jag1|16449|jagged 1
mm9_v1_chr2_+_22924561_22924686	0.244496	FOXN1.p2	NM_001102437|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_001102438|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK147839|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC053518|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC035202|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr16_-_87432721_87432850	0.244351	FOXN1.p2	AK173009|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK165062|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK036725|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK019706|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116272|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116273|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	NM_001081068|Ltn1|78913|listerin E3 ubiquitin protein ligase 1
mm9_v1_chr2_-_37214740_37214764	0.243021	FOXN1.p2	AK028668|Pdcl|67466|phosducin-like	AK028814|Pdcl|67466|phosducin-like	AK166983|Pdcl|67466|phosducin-like	BC006578|Pdcl|67466|phosducin-like	AK133747|Pdcl|67466|phosducin-like
mm9_v1_chr17_+_35068184_35068197	0.242699	FOXN1.p2	NM_010893|Neu1|18010|neuraminidase 1
mm9_v1_chr2_+_181599056_181599106	0.241154	FOXN1.p2	NM_025901|Polr3k|67005|polymerase (RNA) III (DNA directed) polypeptide K
mm9_v1_chr1_-_82287990_82288082	0.241021	FOXN1.p2	AK045317|Irs1|16367|insulin receptor substrate 1	NM_010570|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr2_+_84877428_84877456	0.239945	FOXN1.p2	BC042502|Ssrp1|20833|structure specific recognition protein 1
mm9_v1_chr7_+_19589718_19589775	0.237649	FOXN1.p2	BC019164|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK083013|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1
mm9_v1_chrX_+_20539226_20539259	0.235836	FOXN1.p2	AK038883|A230072C01Rik|320742|RIKEN cDNA A230072C01 gene
mm9_v1_chr8_+_13757654_13757836	0.235245	FOXN1.p2	AK147938|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK167965|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK158014|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	BC026606|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	NM_027276|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK168978|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)
mm9_v1_chr19_+_4962305_4962355	0.235093	FOXN1.p2	NM_025553|Mrpl11|66419|mitochondrial ribosomal protein L11	AK010329|Mrpl11|66419|mitochondrial ribosomal protein L11	AB049639|Mrpl11|66419|mitochondrial ribosomal protein L11	AK167247|Mrpl11|66419|mitochondrial ribosomal protein L11	AK002797|Mrpl11|66419|mitochondrial ribosomal protein L11	BC046750|Mrpl11|66419|mitochondrial ribosomal protein L11
mm9_v1_chrX_-_160396490_160396625	0.235067	FOXN1.p2	BC083160|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	BC099617|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	BC065693|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	D45205|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	AK030296|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	AK045504|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	NM_009453|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	NM_178794|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
mm9_v1_chr17_+_85489932_85489979	0.233872	FOXN1.p2	AK007130|1700106N22Rik|73582|RIKEN cDNA 1700106N22 gene
mm9_v1_chr16_+_3744037_3744202	0.233697	FOXN1.p2	NM_148924|Zfp263|74120|zinc finger protein 263	AK004765|Zfp263|74120|zinc finger protein 263	AK159455|Zfp263|74120|zinc finger protein 263	AF499776|Zfp263|74120|zinc finger protein 263	BC060162|Zfp263|74120|zinc finger protein 263
mm9_v1_chr14_+_33015123_33015189	0.23362	FOXN1.p2	AK036656|Parg|26430|poly (ADP-ribose) glycohydrolase	AK163388|Parg|26430|poly (ADP-ribose) glycohydrolase	EF382673|Parg|26430|poly (ADP-ribose) glycohydrolase	BC059827|Parg|26430|poly (ADP-ribose) glycohydrolase	NM_011960|Parg|26430|poly (ADP-ribose) glycohydrolase	BC050892|Parg|26430|poly (ADP-ribose) glycohydrolase	AK080306|Parg|26430|poly (ADP-ribose) glycohydrolase	AK164013|Parg|26430|poly (ADP-ribose) glycohydrolase	BC053037|Parg|26430|poly (ADP-ribose) glycohydrolase
mm9_v1_chr12_-_71212906_71213013	0.233587	FOXN1.p2	BC137789|Nin|18080|ninein	BC144913|Nin|18080|ninein	BC144914|Nin|18080|ninein	AK129394|Nin|18080|ninein	NM_008697|Nin|18080|ninein	U40342|Nin|18080|ninein	AK162150|Nin|18080|ninein	AK167264|Nin|18080|ninein
mm9_v1_chr3_-_89141938_89141960	0.233442	FOXN1.p2	AK012195|Efna4|13639|ephrin A4	AK142604|Efna4|13639|ephrin A4	NM_007910|Efna4|13639|ephrin A4	AK144085|Efna4|13639|ephrin A4
mm9_v1_chr1_-_59176902_59176978	0.233076	FOXN1.p2	BC147243|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	BC147244|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	AK161697|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_001033449|Als2cr4|381259|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
mm9_v1_chr17_+_24857052_24857220	0.232929	FOXN1.p2	AK012360|Rps2|16898|ribosomal protein S2	AK146259|Rps2|16898|ribosomal protein S2	AK166664|Rps2|16898|ribosomal protein S2	BC087956|Rps2|16898|ribosomal protein S2	AK004568|Rps2|16898|ribosomal protein S2	AK019265|Rps2|16898|ribosomal protein S2	AK151119|Rps2|16898|ribosomal protein S2	AK151985|Rps2|16898|ribosomal protein S2	AK152299|Rps2|16898|ribosomal protein S2	AK159121|Rps2|16898|ribosomal protein S2	AK159138|Rps2|16898|ribosomal protein S2	AK163821|Rps2|16898|ribosomal protein S2	AK166549|Rps2|16898|ribosomal protein S2	AK166726|Rps2|16898|ribosomal protein S2	AK167799|Rps2|16898|ribosomal protein S2	AK167974|Rps2|16898|ribosomal protein S2	AK168307|Rps2|16898|ribosomal protein S2	AK168528|Rps2|16898|ribosomal protein S2	AK169119|Rps2|16898|ribosomal protein S2	AK167033|Rps2|16898|ribosomal protein S2	AK168630|Rps2|16898|ribosomal protein S2	BC002186|Rps2|16898|ribosomal protein S2	BC091730|Rps2|16898|ribosomal protein S2	BC091755|Rps2|16898|ribosomal protein S2	BC092286|Rps2|16898|ribosomal protein S2	BC094058|Rps2|16898|ribosomal protein S2	BC094273|Rps2|16898|ribosomal protein S2	BC106136|Rps2|16898|ribosomal protein S2	BC110678|Rps2|16898|ribosomal protein S2	BC116446|Rps2|16898|ribosomal protein S2	BC093493|Rps2|16898|ribosomal protein S2	BC117558|Rps2|16898|ribosomal protein S2	AF283559|Rps2|16898|ribosomal protein S2
mm9_v1_chr3_+_98944990_98945019	0.231657	FOXN1.p2	BC089583|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK036902|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK017602|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK042715|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK042964|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	NM_027462|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK033774|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)
mm9_v1_chr14_+_31764562_31764704	0.2313	FOXN1.p2	AK078809|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AJ223071|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	Y09234|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK147381|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK132803|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK149584|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK168094|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	BC057939|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AF099067|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	NM_011849|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4	AK144130|Nek4|23955|NIMA (never in mitosis gene a)-related expressed kinase 4
mm9_v1_chr1_-_95375372_95375387	0.230631	FOXN1.p2	BC027779|Hdlbp|110611|high density lipoprotein (HDL) binding protein	BC027788|Hdlbp|110611|high density lipoprotein (HDL) binding protein	NM_133808|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr4_-_125933482_125933589	0.228295	FOXN1.p2	BC023677|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	BC023774|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	AK151613|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_001145970|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_144941|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1
mm9_v1_chr4_+_116230293_116230350	0.225826	FOXN1.p2	AK037224|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK133761|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK019942|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	BC066034|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	NM_029868|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1
mm9_v1_chr13_-_78337844_78338043	0.225333	FOXN1.p2	U07625|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	BC048695|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1
mm9_v1_chr6_-_47544925_47545028	0.22504	FOXN1.p2	BC003772|Ezh2|14056|enhancer of zeste homolog 2 (Drosophila)	BC016391|Ezh2|14056|enhancer of zeste homolog 2 (Drosophila)	BC079538|Ezh2|14056|enhancer of zeste homolog 2 (Drosophila)	AK220174|Ezh2|14056|enhancer of zeste homolog 2 (Drosophila)	U52951|Ezh2|14056|enhancer of zeste homolog 2 (Drosophila)	AK157853|Ezh2|14056|enhancer of zeste homolog 2 (Drosophila)	NM_001146689|Ezh2|14056|enhancer of zeste homolog 2 (Drosophila)	NM_007971|Ezh2|14056|enhancer of zeste homolog 2 (Drosophila)
mm9_v1_chrX_-_131543723_131543772	0.22411	FOXN1.p2	BC067022|Zmat1|215693|zinc finger, matrin type 1	NM_175446|Zmat1|215693|zinc finger, matrin type 1
mm9_v1_chr9_-_96378951_96379045	0.223574	FOXN1.p2	AK007588|Rnf7|19823|ring finger protein 7	BC011127|Rnf7|19823|ring finger protein 7	AK002628|Rnf7|19823|ring finger protein 7	AK003248|Rnf7|19823|ring finger protein 7	AK003963|Rnf7|19823|ring finger protein 7	AK011328|Rnf7|19823|ring finger protein 7	AK146030|Rnf7|19823|ring finger protein 7	NM_011279|Rnf7|19823|ring finger protein 7	AF092877|Rnf7|19823|ring finger protein 7
mm9_v1_chr7_-_36000343_36000392	0.222916	FOXN1.p2	AK149337|Lrp3|435965|low density lipoprotein receptor-related protein 3	NM_001024707|Lrp3|435965|low density lipoprotein receptor-related protein 3
mm9_v1_chr13_-_93300744_93300828	0.222654	FOXN1.p2	AK122241|Zfyve16|218441|zinc finger, FYVE domain containing 16	BC042669|Zfyve16|218441|zinc finger, FYVE domain containing 16	NM_173392|Zfyve16|218441|zinc finger, FYVE domain containing 16	AK170435|Zfyve16|218441|zinc finger, FYVE domain containing 16	AK045090|Zfyve16|218441|zinc finger, FYVE domain containing 16
mm9_v1_chr14_+_76815627_76815627	0.2223	FOXN1.p2	BC058660|Tsc22d1|21807|TSC22 domain family, member 1	NM_207652|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr6_+_53989925_53989975	0.222011	FOXN1.p2	AK030336|Chn2|69993|chimerin (chimaerin) 2	NM_001163640|Chn2|69993|chimerin (chimaerin) 2
mm9_v1_chr2_-_130110142_130110202	0.221536	FOXN1.p2	BC009022|Idh3b|170718|isocitrate dehydrogenase 3 (NAD+) beta	AY035212|Idh3b|170718|isocitrate dehydrogenase 3 (NAD+) beta	AK046059|Idh3b|170718|isocitrate dehydrogenase 3 (NAD+) beta	NM_130884|Idh3b|170718|isocitrate dehydrogenase 3 (NAD+) beta
mm9_v1_chr4_+_40669908_40669973	0.221487	FOXN1.p2	NM_001164671|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	NM_001164672|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1
mm9_v1_chr7_-_89079335_89079355	0.221451	FOXN1.p2	AK045542|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	NM_013886|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr11_+_6289339_6289394	0.221078	FOXN1.p2	NM_028601|Zmiz2|52915|zinc finger, MIZ-type containing 2
mm9_v1_chr6_-_83456775_83456962	0.220755	FOXN1.p2	AK167071|Dguok|27369|deoxyguanosine kinase	U90524|Dguok|27369|deoxyguanosine kinase	AJ133749|Dguok|27369|deoxyguanosine kinase	AY037862|Dguok|27369|deoxyguanosine kinase	BC012647|Dguok|27369|deoxyguanosine kinase	AK035281|Dguok|27369|deoxyguanosine kinase	BC094920|Dguok|27369|deoxyguanosine kinase	NM_001162521|Dguok|27369|deoxyguanosine kinase	NM_013764|Dguok|27369|deoxyguanosine kinase
mm9_v1_chr7_+_130521491_130521589	0.220646	FOXN1.p2	NM_025304|Lcmt1|30949|leucine carboxyl methyltransferase 1	AK003424|Lcmt1|30949|leucine carboxyl methyltransferase 1	BC132507|Lcmt1|30949|leucine carboxyl methyltransferase 1	BC132509|Lcmt1|30949|leucine carboxyl methyltransferase 1	BC145301|Lcmt1|30949|leucine carboxyl methyltransferase 1
mm9_v1_chr11_-_4494790_4494809	0.220045	FOXN1.p2	BC032166|Mtmr3|74302|myotubularin related protein 3	AK141138|Mtmr3|74302|myotubularin related protein 3	BC081544|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr13_+_15555483_15555555	0.219153	FOXN1.p2	AK158261|Gli3|14634|GLI-Kruppel family member GLI3	NM_008130|Gli3|14634|GLI-Kruppel family member GLI3
mm9_v1_chr1_-_55144637_55144685	0.217979	FOXN1.p2	X55023|Hspd1|15510|heat shock protein 1 (chaperonin)	BC016400|Hspd1|15510|heat shock protein 1 (chaperonin)	AK143882|Hspd1|15510|heat shock protein 1 (chaperonin)
mm9_v1_chr1_-_95651350_95651356	0.216019	FOXN1.p2	AK140888|Thap4|67026|THAP domain containing 4
mm9_v1_chr4_+_59016013_59016081	0.214048	FOXN1.p2	NM_001033165|Dnajc25|72429|DnaJ (Hsp40) homolog, subfamily C, member 25
mm9_v1_chr11_+_112643501_112643595	0.214021	FOXN1.p2	NM_011448|Sox9|20682|SRY-box containing gene 9	AK049986|Sox9|20682|SRY-box containing gene 9	AK030187|Sox9|20682|SRY-box containing gene 9	AK031516|Sox9|20682|SRY-box containing gene 9	BC023796|Sox9|20682|SRY-box containing gene 9	BC023808|Sox9|20682|SRY-box containing gene 9	BC024958|Sox9|20682|SRY-box containing gene 9	BC023953|Sox9|20682|SRY-box containing gene 9	AK220197|Sox9|20682|SRY-box containing gene 9	BC034264|Sox9|20682|SRY-box containing gene 9
mm9_v1_chr4_-_62186041_62186047	0.211407	FOXN1.p2	AF230806|Pole3|59001|polymerase (DNA directed), epsilon 3 (p17 subunit)	BC024996|Pole3|59001|polymerase (DNA directed), epsilon 3 (p17 subunit)	NM_021498|Pole3|59001|polymerase (DNA directed), epsilon 3 (p17 subunit)
mm9_v1_chr9_-_75458918_75458929	0.210322	FOXN1.p2	AK018223|Tmod2|50876|tropomodulin 2
mm9_v1_chr7_-_34918076_34918310	0.209997	FOXN1.p2	BC054125|Wtip|101543|WT1-interacting protein	NM_207212|Wtip|101543|WT1-interacting protein
mm9_v1_chr12_+_72075637_72075733	0.209649	FOXN1.p2	AK165424|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AK002877|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AF055983|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AK168495|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AK169577|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	BC091743|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3	AF060089|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3
mm9_v1_chr5_-_124134289_124134379	0.209334	FOXN1.p2	BC007191|Clip1|56430|CAP-GLY domain containing linker protein 1	NM_019765|Clip1|56430|CAP-GLY domain containing linker protein 1	AK220172|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr2_+_32631305_32631345	0.208483	FOXN1.p2	AK132137|Ptrh1|329384|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)	BC098218|Ptrh1|329384|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)	AK075833|Ptrh1|329384|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)	NM_178595|Ptrh1|329384|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)
mm9_v1_chr1_+_159342882_159342921	0.206662	FOXN1.p2	BC055878|2810025M15Rik|69953|RIKEN cDNA 2810025M15 gene	AK012812|2810025M15Rik|69953|RIKEN cDNA 2810025M15 gene
mm9_v1_chr4_+_124527985_124528057	0.20607	FOXN1.p2	AK153627|Yrdc|230734|yrdC domain containing (E.coli)	NM_153566|Yrdc|230734|yrdC domain containing (E.coli)	BC023823|Yrdc|230734|yrdC domain containing (E.coli)	AY283537|Yrdc|230734|yrdC domain containing (E.coli)
mm9_v1_chr6_-_81915918_81915957	0.205996	FOXN1.p2	BC020315|Mrpl19|56284|mitochondrial ribosomal protein L19	BC043921|Mrpl19|56284|mitochondrial ribosomal protein L19	BC061064|Mrpl19|56284|mitochondrial ribosomal protein L19	AK030793|Mrpl19|56284|mitochondrial ribosomal protein L19	AK021180|Mrpl19|56284|mitochondrial ribosomal protein L19	AK050637|Mrpl19|56284|mitochondrial ribosomal protein L19	NM_026490|Mrpl19|56284|mitochondrial ribosomal protein L19	AK141554|Mrpl19|56284|mitochondrial ribosomal protein L19
mm9_v1_chr17_+_24625943_24625963	0.205977	FOXN1.p2	AK129327|Caskin1|268932|CASK interacting protein 1	BC060720|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr9_-_108480927_108481054	0.20505	FOXN1.p2	BC054367|Wdr6|83669|WD repeat domain 6	AK163752|Wdr6|83669|WD repeat domain 6	AK052235|Wdr6|83669|WD repeat domain 6	AK146617|Wdr6|83669|WD repeat domain 6	AK165935|Wdr6|83669|WD repeat domain 6	AK046119|Wdr6|83669|WD repeat domain 6	AK037181|Wdr6|83669|WD repeat domain 6	AK166265|Wdr6|83669|WD repeat domain 6	AF348591|Wdr6|83669|WD repeat domain 6	BC050894|Wdr6|83669|WD repeat domain 6	NM_031392|Wdr6|83669|WD repeat domain 6	AK169357|Wdr6|83669|WD repeat domain 6
mm9_v1_chr4_+_155266340_155266446	0.204595	FOXN1.p2	BC098196|Acap3|140500|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3	BC025556|Acap3|140500|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
mm9_v1_chr17_-_48061577_48061752	0.204342	FOXN1.p2	BC057110|Foxp4|74123|forkhead box P4	NM_001110824|Foxp4|74123|forkhead box P4	NM_001110825|Foxp4|74123|forkhead box P4	NM_028767|Foxp4|74123|forkhead box P4
mm9_v1_chr5_-_42099382_42099426	0.204327	FOXN1.p2	AK159493|Rab28|100972|RAB28, member RAS oncogene family	BC004580|Rab28|100972|RAB28, member RAS oncogene family	NM_027295|Rab28|100972|RAB28, member RAS oncogene family	AK012286|Rab28|100972|RAB28, member RAS oncogene family
mm9_v1_chr3_-_158225075_158225097	0.204106	FOXN1.p2	BC138450|Lrrc7|242274|leucine rich repeat containing 7
mm9_v1_chr10_-_128026556_128026720	0.203788	FOXN1.p2	AY686636|Erbb3|13867|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	NM_010153|Erbb3|13867|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	BC106091|Erbb3|13867|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)
mm9_v1_chr2_-_24790784_24790800	0.203064	FOXN1.p2	NM_001162485|Arrdc1|215705|arrestin domain containing 1	NM_178408|Arrdc1|215705|arrestin domain containing 1
mm9_v1_chr11_+_68873212_68873277	0.202975	FOXN1.p2	AK009886|2310047M10Rik|71923|RIKEN cDNA 2310047M10 gene	AK151629|2310047M10Rik|71923|RIKEN cDNA 2310047M10 gene	NM_028005|2310047M10Rik|71923|RIKEN cDNA 2310047M10 gene
mm9_v1_chr18_+_9957913_9958236	0.20277	FOXN1.p2	AK168619|Thoc1|225160|THO complex 1	BC024951|Thoc1|225160|THO complex 1	AK167374|Thoc1|225160|THO complex 1	AK042867|Thoc1|225160|THO complex 1	AK139307|Thoc1|225160|THO complex 1	AK013983|Thoc1|225160|THO complex 1	AK031785|Thoc1|225160|THO complex 1	AK032200|Thoc1|225160|THO complex 1	NM_153552|Thoc1|225160|THO complex 1	AK052835|Thoc1|225160|THO complex 1	AK082591|Thoc1|225160|THO complex 1
mm9_v1_chr6_-_113433154_113433156	0.2025	FOXN1.p2	AK033890|Il17rc|171095|interleukin 17 receptor C	AK040950|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr10_+_77068939_77069034	0.201754	FOXN1.p2	AK012742|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK150063|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK150200|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK162035|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK160169|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK013019|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK148306|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK168988|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	NM_019929|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK167207|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AF063847|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	BC115488|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	BC115489|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)
mm9_v1_chr12_+_113384460_113384575	0.201423	FOXN1.p2	GQ489027|Kif26a|668303|kinesin family member 26A
mm9_v1_chr13_-_69877709_69877899	0.200644	FOXN1.p2	BC058543|Ube2ql1|76980|ubiquitin-conjugating enzyme E2Q family-like 1	BC116979|Ube2ql1|76980|ubiquitin-conjugating enzyme E2Q family-like 1	BC116981|Ube2ql1|76980|ubiquitin-conjugating enzyme E2Q family-like 1
mm9_v1_chr18_-_35821788_35821845	0.19985	FOXN1.p2	BC060950|Spata24|71242|spermatogenesis associated 24	AK017218|Spata24|71242|spermatogenesis associated 24	AK016341|Spata24|71242|spermatogenesis associated 24	AK012241|Spata24|71242|spermatogenesis associated 24	AY730532|Spata24|71242|spermatogenesis associated 24	NM_027733|Spata24|71242|spermatogenesis associated 24	NM_029485|Spata24|71242|spermatogenesis associated 24
mm9_v1_chr13_+_89680240_89680277	0.198644	FOXN1.p2	AK032750|Hapln1|12950|hyaluronan and proteoglycan link protein 1	NM_013500|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr9_-_45714487_45714524	0.196701	FOXN1.p2	AK032376|Rnf214|235315|ring finger protein 214
mm9_v1_chr3_-_151873242_151873265	0.195496	FOXN1.p2	NM_027287|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK077587|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr2_-_127073455_127073460	0.195133	FOXN1.p2	BC004089|Ciao1|26371|cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)
mm9_v1_chr15_-_73253617_73253652	0.194695	FOXN1.p2	AK220543|Ptk2|14083|PTK2 protein tyrosine kinase 2	NM_001130409|Ptk2|14083|PTK2 protein tyrosine kinase 2	NM_007982|Ptk2|14083|PTK2 protein tyrosine kinase 2	AK005468|Ptk2|14083|PTK2 protein tyrosine kinase 2
mm9_v1_chr5_+_65928483_65928591	0.192783	FOXN1.p2	AK139564|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_016786|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK048194|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK035371|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK018366|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK160728|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK031055|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK036068|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK162142|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB011081|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC085311|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK166647|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
mm9_v1_chr3_+_145650833_145650943	0.192352	FOXN1.p2	NM_001166064|Syde2|214804|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
mm9_v1_chr4_-_11181373_11181380	0.19232	FOXN1.p2	AK169552|Ints8|72656|integrator complex subunit 8	AK049513|Ints8|72656|integrator complex subunit 8
mm9_v1_chr5_+_9266131_9266133	0.190866	FOXN1.p2	AK134808|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK161902|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene
mm9_v1_chr8_-_109572384_109572545	0.189523	FOXN1.p2	AK075957|Pdf|68023|peptide deformylase (mitochondrial)	NM_026513|Pdf|68023|peptide deformylase (mitochondrial)
mm9_v1_chrX_-_12250659_12250764	0.188864	FOXN1.p2	BC038642|1810030O07Rik|69155|RIKEN cDNA 1810030O07 gene	AK078166|1810030O07Rik|69155|RIKEN cDNA 1810030O07 gene	NM_175141|1810030O07Rik|69155|RIKEN cDNA 1810030O07 gene	AK169085|1810030O07Rik|69155|RIKEN cDNA 1810030O07 gene	BC051146|1810030O07Rik|69155|RIKEN cDNA 1810030O07 gene	AK146041|1810030O07Rik|69155|RIKEN cDNA 1810030O07 gene	AK007661|1810030O07Rik|69155|RIKEN cDNA 1810030O07 gene	BC137660|1810030O07Rik|69155|RIKEN cDNA 1810030O07 gene
mm9_v1_chr5_+_87233239_87233314	0.188512	FOXN1.p2	AK135309|Ythdc1|231386|YTH domain containing 1
mm9_v1_chr4_-_41222121_41222174	0.187969	FOXN1.p2	BC007179|Ubap2|68926|ubiquitin-associated protein 2	NM_026872|Ubap2|68926|ubiquitin-associated protein 2
mm9_v1_chr11_-_62462024_62462096	0.186825	FOXN1.p2	BC053455|BC046404|192976|cDNA sequence BC046404	NM_198861|BC046404|192976|cDNA sequence BC046404
mm9_v1_chr5_+_53132872_53132957	0.186362	FOXN1.p2	BC062144|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta	AF411321|Pi4k2b|67073|phosphatidylinositol 4-kinase type 2 beta
mm9_v1_chr8_-_20020350_20020421	0.185816	FOXN1.p2	BC025151|2610005L07Rik|381598|cadherin 11 pseudogene	AK009182|2610005L07Rik|381598|cadherin 11 pseudogene	AK160987|2610005L07Rik|381598|cadherin 11 pseudogene	AK131627|2610005L07Rik|381598|cadherin 11 pseudogene	AK035187|2610005L07Rik|381598|cadherin 11 pseudogene
mm9_v1_chr5_+_130620730_130620855	0.184812	FOXN1.p2	AK162568|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK083583|Kctd7|212919|potassium channel tetramerisation domain containing 7	NM_172509|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK029942|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK034583|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK140606|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC139070|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC141201|Kctd7|212919|potassium channel tetramerisation domain containing 7
mm9_v1_chr5_+_124990703_124991022	0.184505	FOXN1.p2	BC131977|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC138294|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC083140|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	NM_019770|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK089965|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AB025218|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK179651|Tmed2|56334|transmembrane emp24 domain trafficking protein 2
mm9_v1_chr8_+_86239094_86239097	0.184279	FOXN1.p2	NM_197982|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm9_v1_chr14_-_47896531_47896541	0.184132	FOXN1.p2	NM_172598|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1
mm9_v1_chr7_+_38968802_38968906	0.183138	FOXN1.p2	NM_028166|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	AK146474|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	AK005449|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	AK032342|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	AK032135|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	BC010476|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	BC085480|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	BC092099|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene
mm9_v1_chr4_-_41261815_41261871	0.183072	FOXN1.p2	AK087517|Dcaf12|68970|DDB1 and CUL4 associated factor 12	BC023852|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK083369|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK031089|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr5_+_122822549_122822598	0.182781	FOXN1.p2	AK087968|Gpn3|68080|GPN-loop GTPase 3	AK080720|Gpn3|68080|GPN-loop GTPase 3	AK146783|Gpn3|68080|GPN-loop GTPase 3	AK016996|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr4_-_11181388_11181409	0.182107	FOXN1.p2	AK140829|Ints8|72656|integrator complex subunit 8	NM_001159595|Ints8|72656|integrator complex subunit 8	NM_178112|Ints8|72656|integrator complex subunit 8
mm9_v1_chr3_+_51219882_51219968	0.181583	FOXN1.p2	NM_053089|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm9_v1_chr8_+_86239131_86239208	0.181151	FOXN1.p2	AK146294|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK145927|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK150997|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK172448|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK012002|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK016960|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK149475|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK151395|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK152394|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK137114|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	BC020134|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK164289|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK168079|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK167890|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm9_v1_chr3_-_19935200_19935283	0.180797	FOXN1.p2	AK170581|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK034377|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK169855|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	BC058235|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)
mm9_v1_chr11_+_70658271_70658306	0.17969	FOXN1.p2	BC060166|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC009814|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC080274|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AK019413|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AK151901|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AK137236|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1
mm9_v1_chr16_-_62846777_62846879	0.179521	FOXN1.p2	AK016794|Arl13b|68146|ADP-ribosylation factor-like 13B	AK020859|Arl13b|68146|ADP-ribosylation factor-like 13B	AK051159|Arl13b|68146|ADP-ribosylation factor-like 13B	AK021270|Arl13b|68146|ADP-ribosylation factor-like 13B	NM_026577|Arl13b|68146|ADP-ribosylation factor-like 13B
mm9_v1_chr19_-_5349326_5349384	0.179255	FOXN1.p2	BC027680|Cst6|73720|cystatin E/M	BC061036|Cst6|73720|cystatin E/M	AK003744|Cst6|73720|cystatin E/M
mm9_v1_chr19_+_4839365_4839460	0.17911	FOXN1.p2	NM_207268|Ccdc87|399599|coiled-coil domain containing 87	AK029877|Ccdc87|399599|coiled-coil domain containing 87	BC145660|Ccdc87|399599|coiled-coil domain containing 87
mm9_v1_chrX_+_148238186_148238218	0.178209	FOXN1.p2	AK166712|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK142956|Huwe1|59026|HECT, UBA and WWE domain containing 1
mm9_v1_chr3_-_33042147_33042183	0.178005	FOXN1.p2	AK044552|Pex5l|58869|peroxisomal biogenesis factor 5-like
mm9_v1_chr9_-_99469275_99469317	0.177197	FOXN1.p2	BC038866|Armc8|74125|armadillo repeat containing 8	AK004793|Armc8|74125|armadillo repeat containing 8	NM_001166138|Armc8|74125|armadillo repeat containing 8	NM_028768|Armc8|74125|armadillo repeat containing 8
mm9_v1_chr16_-_11134587_11134761	0.177101	FOXN1.p2	AK157288|Txndc11|106200|thioredoxin domain containing 11	BC029643|Txndc11|106200|thioredoxin domain containing 11	NM_029582|Txndc11|106200|thioredoxin domain containing 11	AK156154|Txndc11|106200|thioredoxin domain containing 11	AK170352|Txndc11|106200|thioredoxin domain containing 11	AK013044|Txndc11|106200|thioredoxin domain containing 11	AK155844|Txndc11|106200|thioredoxin domain containing 11	AK159484|Txndc11|106200|thioredoxin domain containing 11	BC020363|Txndc11|106200|thioredoxin domain containing 11	AK139620|Txndc11|106200|thioredoxin domain containing 11	AK157948|Txndc11|106200|thioredoxin domain containing 11	AK156590|Txndc11|106200|thioredoxin domain containing 11	AK029166|Txndc11|106200|thioredoxin domain containing 11
mm9_v1_chr7_+_29062724_29062783	0.176515	FOXN1.p2	NM_001177427|Eid2b|434156|EP300 interacting inhibitor of differentiation 2B	AK044722|Eid2b|434156|EP300 interacting inhibitor of differentiation 2B
mm9_v1_chr1_+_64579559_64579575	0.175722	FOXN1.p2	AK044992|Creb1|12912|cAMP responsive element binding protein 1	AK044993|Creb1|12912|cAMP responsive element binding protein 1
mm9_v1_chr11_-_57981970_57982020	0.172765	FOXN1.p2	AK049216|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC137802|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144921|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144922|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK143536|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK131137|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr7_+_104520120_104520143	0.172729	FOXN1.p2	AK166897|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	NM_199035|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	AK141341|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	AK166755|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	BC061244|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)
mm9_v1_chr10_+_80568647_80568919	0.172629	FOXN1.p2	AK080574|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK172055|Map2k2|26396|mitogen-activated protein kinase kinase 2	NM_023138|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK171584|Map2k2|26396|mitogen-activated protein kinase kinase 2	BC014830|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK143425|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK138130|Map2k2|26396|mitogen-activated protein kinase kinase 2	S68267|Map2k2|26396|mitogen-activated protein kinase kinase 2
mm9_v1_chr8_-_96536437_96536583	0.172601	FOXN1.p2	BC040338|Amfr|23802|autocrine motility factor receptor	BC034538|Amfr|23802|autocrine motility factor receptor	AK038442|Amfr|23802|autocrine motility factor receptor	AK170716|Amfr|23802|autocrine motility factor receptor	AK157327|Amfr|23802|autocrine motility factor receptor	NM_011787|Amfr|23802|autocrine motility factor receptor
mm9_v1_chr5_-_145900858_145900915	0.172382	FOXN1.p2	BC055927|Pdap1|231887|PDGFA associated protein 1	AK169233|Pdap1|231887|PDGFA associated protein 1	BC139204|Pdap1|231887|PDGFA associated protein 1	BC139205|Pdap1|231887|PDGFA associated protein 1
mm9_v1_chr8_-_124175827_124175832	0.171921	FOXN1.p2	BC132449|Zcchc14|142682|zinc finger, CCHC domain containing 14	BC137853|Zcchc14|142682|zinc finger, CCHC domain containing 14	AB030244|Zcchc14|142682|zinc finger, CCHC domain containing 14	NM_080855|Zcchc14|142682|zinc finger, CCHC domain containing 14
mm9_v1_chr9_-_44575861_44575929	0.171415	FOXN1.p2	BC034754|Arcn1|213827|archain 1	BC083152|Arcn1|213827|archain 1	BC017124|Arcn1|213827|archain 1	AK031385|Arcn1|213827|archain 1	BC033387|Arcn1|213827|archain 1	NM_145985|Arcn1|213827|archain 1	AK154066|Arcn1|213827|archain 1	AK028556|Arcn1|213827|archain 1	AK128973|Arcn1|213827|archain 1	BC023728|Arcn1|213827|archain 1	AK147747|Arcn1|213827|archain 1	AK047995|Arcn1|213827|archain 1
mm9_v1_chr2_+_28980511_28980658	0.170033	FOXN1.p2	AK044730|Setx|269254|senataxin	NM_198033|Setx|269254|senataxin
mm9_v1_chr1_+_152239986_152240102	0.169837	FOXN1.p2	BC141406|Tpr|108989|translocated promoter region	BC141410|Tpr|108989|translocated promoter region
mm9_v1_chr1_-_145624156_145624181	0.168622	FOXN1.p2	AK076167|Trove2|20822|TROVE domain family, member 2	NM_013835|Trove2|20822|TROVE domain family, member 2
mm9_v1_chr11_-_116714406_116714411	0.168036	FOXN1.p2	AK165670|Srsf2|20382|serine/arginine-rich splicing factor 2	NM_011358|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr6_+_85401961_85402121	0.167016	FOXN1.p2	AK168087|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK150160|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK169426|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK012201|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK167367|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK166888|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK146902|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK167938|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK167827|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK168272|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK077781|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	BC008255|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK184902|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK198665|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK203942|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)
mm9_v1_chr19_-_44144175_44144240	0.166404	FOXN1.p2	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr11_-_69793943_69794050	0.165819	FOXN1.p2	BC003752|Rai12|54351|retinoic acid induced 12	AF004107|Rai12|54351|retinoic acid induced 12
mm9_v1_chr7_+_148633501_148633587	0.165538	FOXN1.p2	AK008344|Rplp2|67186|ribosomal protein, large P2	AK010618|Rplp2|67186|ribosomal protein, large P2	AK012526|Rplp2|67186|ribosomal protein, large P2	NM_026020|Rplp2|67186|ribosomal protein, large P2	AK088737|Rplp2|67186|ribosomal protein, large P2	AK134206|Rplp2|67186|ribosomal protein, large P2	AK028140|Rplp2|67186|ribosomal protein, large P2	AK028149|Rplp2|67186|ribosomal protein, large P2	AK012402|Rplp2|67186|ribosomal protein, large P2	BC012413|Rplp2|67186|ribosomal protein, large P2	AK002419|Rplp2|67186|ribosomal protein, large P2	AK166774|Rplp2|67186|ribosomal protein, large P2
mm9_v1_chr17_+_73457324_73457400	0.165289	FOXN1.p2	NM_001081071|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177967|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177968|Lclat1|225010|lysocardiolipin acyltransferase 1	AK144580|Lclat1|225010|lysocardiolipin acyltransferase 1	BC147499|Lclat1|225010|lysocardiolipin acyltransferase 1	BC150884|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158076|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158079|Lclat1|225010|lysocardiolipin acyltransferase 1
mm9_v1_chr4_-_59562054_59562263	0.165135	FOXN1.p2	BC057641|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	BC006638|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK033732|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK088560|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_144904|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_178164|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)
mm9_v1_chr8_-_98412271_98412300	0.164696	FOXN1.p2	AK098166|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK167767|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	BC089015|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK155075|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK149886|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK149926|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK136556|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK152921|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chr7_-_105326751_105326764	0.164467	FOXN1.p2	AK155179|Capn5|12337|calpain 5
mm9_v1_chrX_+_151696991_151697138	0.164201	FOXN1.p2	AK168713|Acot9|56360|acyl-CoA thioesterase 9	NM_019736|Acot9|56360|acyl-CoA thioesterase 9	AK076513|Acot9|56360|acyl-CoA thioesterase 9	BC021763|Acot9|56360|acyl-CoA thioesterase 9	AK002892|Acot9|56360|acyl-CoA thioesterase 9	AK009717|Acot9|56360|acyl-CoA thioesterase 9	AK088082|Acot9|56360|acyl-CoA thioesterase 9	AK170876|Acot9|56360|acyl-CoA thioesterase 9	AJ238893|Acot9|56360|acyl-CoA thioesterase 9	AB028898|Acot9|56360|acyl-CoA thioesterase 9
mm9_v1_chr5_+_53174293_53174344	0.16378	FOXN1.p2	AK138997|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK049511|Zcchc4|78796|zinc finger, CCHC domain containing 4	NM_030185|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK019621|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK143805|Zcchc4|78796|zinc finger, CCHC domain containing 4
mm9_v1_chr18_+_33954513_33954583	0.16306	FOXN1.p2	AK010403|2410004N09Rik|69749|RIKEN cDNA 2410004N09 gene
mm9_v1_chr12_-_80273320_80273473	0.162802	FOXN1.p2	AF035821|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AF035208|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC009810|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC080204|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC002290|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK160624|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK002289|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	NM_016800|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog
mm9_v1_chr12_-_71087988_71088118	0.162647	FOXN1.p2	AJ292968|Sav1|64010|salvador homolog 1 (Drosophila)	NM_022028|Sav1|64010|salvador homolog 1 (Drosophila)
mm9_v1_chr8_-_98412302_98412339	0.161767	FOXN1.p2	BC089341|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK147953|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chr2_+_84877325_84877397	0.159859	FOXN1.p2	AK151584|Ssrp1|20833|structure specific recognition protein 1	AK147005|Ssrp1|20833|structure specific recognition protein 1	AK146446|Ssrp1|20833|structure specific recognition protein 1	AK146585|Ssrp1|20833|structure specific recognition protein 1	NM_182990|Ssrp1|20833|structure specific recognition protein 1	AK146607|Ssrp1|20833|structure specific recognition protein 1	AK146691|Ssrp1|20833|structure specific recognition protein 1	S68099|Ssrp1|20833|structure specific recognition protein 1
mm9_v1_chr11_-_102091406_102091485	0.15919	FOXN1.p2	BC049926|Hdac5|15184|histone deacetylase 5	AK146483|Hdac5|15184|histone deacetylase 5	BC058554|Hdac5|15184|histone deacetylase 5	AK145972|Hdac5|15184|histone deacetylase 5	AK139202|Hdac5|15184|histone deacetylase 5	AK155335|Hdac5|15184|histone deacetylase 5	NM_001077696|Hdac5|15184|histone deacetylase 5	NM_010412|Hdac5|15184|histone deacetylase 5
mm9_v1_chr1_-_75475320_75475722	0.158856	FOXN1.p2	AK160734|Chpf|74241|chondroitin polymerizing factor	AK177663|Chpf|74241|chondroitin polymerizing factor	AK187637|Chpf|74241|chondroitin polymerizing factor	AK190649|Chpf|74241|chondroitin polymerizing factor	BC030889|Chpf|74241|chondroitin polymerizing factor	AK006466|Chpf|74241|chondroitin polymerizing factor	AK155424|Chpf|74241|chondroitin polymerizing factor
mm9_v1_chr11_-_97561808_97561839	0.158423	FOXN1.p2	NM_009545|Pcgf2|22658|polycomb group ring finger 2
mm9_v1_chr4_+_109349189_109349242	0.157924	FOXN1.p2	BC065098|Faf1|14084|Fas-associated factor 1	NM_007983|Faf1|14084|Fas-associated factor 1
mm9_v1_chr1_+_154802198_154802230	0.157917	FOXN1.p2	BC089007|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	NM_175460|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr19_-_54018933_54018969	0.157479	FOXN1.p2	BC040803|Bbip1|66360|BBSome interacting protein 1	AK011271|Bbip1|66360|BBSome interacting protein 1
mm9_v1_chr6_-_39068340_39068419	0.157327	FOXN1.p2	AK036886|Parp12|243771|poly (ADP-ribose) polymerase family, member 12	NM_172893|Parp12|243771|poly (ADP-ribose) polymerase family, member 12
mm9_v1_chr9_-_59598416_59598455	0.15699	FOXN1.p2	BC037443|Senp8|71599|SUMO/sentrin specific peptidase 8	AK018606|Senp8|71599|SUMO/sentrin specific peptidase 8	AK029856|Senp8|71599|SUMO/sentrin specific peptidase 8	AK049120|Senp8|71599|SUMO/sentrin specific peptidase 8	AK136214|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172068|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172069|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172070|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172071|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_027838|Senp8|71599|SUMO/sentrin specific peptidase 8
mm9_v1_chr17_-_15664238_15664282	0.156953	FOXN1.p2	DQ906042|Pdcd2|18567|programmed cell death 2	U10903|Pdcd2|18567|programmed cell death 2	AK045985|Pdcd2|18567|programmed cell death 2	NM_008799|Pdcd2|18567|programmed cell death 2
mm9_v1_chr8_-_28285056_28285121	0.156947	FOXN1.p2	AK014696|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK089792|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	BC125400|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	BC132094|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK166735|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK086797|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK151024|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK030769|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	NM_001080813|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	NM_029423|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)
mm9_v1_chr4_-_45024999_45025283	0.156931	FOXN1.p2	AK160003|Zbtb5|230119|zinc finger and BTB domain containing 5	BC054551|Zbtb5|230119|zinc finger and BTB domain containing 5	AK031172|Zbtb5|230119|zinc finger and BTB domain containing 5	AY635051|Zbtb5|230119|zinc finger and BTB domain containing 5	BC057545|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_001163283|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_001163284|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_173399|Zbtb5|230119|zinc finger and BTB domain containing 5
mm9_v1_chr4_-_148800458_148800500	0.1569	FOXN1.p2	BC067402|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm9_v1_chr18_-_67770442_67770527	0.156051	FOXN1.p2	AK129296|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr2_+_22924846_22924986	0.155962	FOXN1.p2	AK005001|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC061484|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr9_+_120019521_120019545	0.15588	FOXN1.p2	AK167737|Slc25a38|208638|solute carrier family 25, member 38
mm9_v1_chr5_-_117565868_117565988	0.155405	FOXN1.p2	BC062176|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK010274|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK150633|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AF469109|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK043652|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK138947|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	BC055764|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK045475|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)
mm9_v1_chr9_+_85736444_85736534	0.153849	FOXN1.p2	NM_001164792|Tpbg|21983|trophoblast glycoprotein	AK165553|Tpbg|21983|trophoblast glycoprotein	BC058198|Tpbg|21983|trophoblast glycoprotein	AK143519|Tpbg|21983|trophoblast glycoprotein
mm9_v1_chr16_+_23127862_23127891	0.152785	FOXN1.p2	AK018147|6330408M09Rik|70749|RIKEN cDNA 6330408M09 gene	AK135589|6330408M09Rik|70749|RIKEN cDNA 6330408M09 gene
mm9_v1_chr2_-_127073464_127073551	0.152629	FOXN1.p2	AK028376|Ciao1|26371|cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)	AK004129|Ciao1|26371|cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)	AK002314|Ciao1|26371|cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)	NM_025296|Ciao1|26371|cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae)
mm9_v1_chr9_-_123022207_123022342	0.152529	FOXN1.p2	BC052464|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK169197|Zdhhc3|69035|zinc finger, DHHC domain containing 3	BC018334|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK018755|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK080541|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK007355|Zdhhc3|69035|zinc finger, DHHC domain containing 3	BC005531|Zdhhc3|69035|zinc finger, DHHC domain containing 3	BC025126|Zdhhc3|69035|zinc finger, DHHC domain containing 3	AK046166|Zdhhc3|69035|zinc finger, DHHC domain containing 3	NM_026917|Zdhhc3|69035|zinc finger, DHHC domain containing 3
mm9_v1_chr14_+_28242002_28242052	0.152468	FOXN1.p2	AK016751|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed	AK044563|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed	NM_001114879|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed	NM_028945|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed
mm9_v1_chr6_+_108733075_108733279	0.151559	FOXN1.p2	AK152798|Arl8b|67166|ADP-ribosylation factor-like 8B	AK144177|Arl8b|67166|ADP-ribosylation factor-like 8B	AK076292|Arl8b|67166|ADP-ribosylation factor-like 8B	AK146307|Arl8b|67166|ADP-ribosylation factor-like 8B	AK159348|Arl8b|67166|ADP-ribosylation factor-like 8B	AK170645|Arl8b|67166|ADP-ribosylation factor-like 8B	AK012024|Arl8b|67166|ADP-ribosylation factor-like 8B	AK075941|Arl8b|67166|ADP-ribosylation factor-like 8B	AK151036|Arl8b|67166|ADP-ribosylation factor-like 8B	AK149822|Arl8b|67166|ADP-ribosylation factor-like 8B	BC013719|Arl8b|67166|ADP-ribosylation factor-like 8B	AK009279|Arl8b|67166|ADP-ribosylation factor-like 8B	AK169929|Arl8b|67166|ADP-ribosylation factor-like 8B	AK005999|Arl8b|67166|ADP-ribosylation factor-like 8B	AK195129|Arl8b|67166|ADP-ribosylation factor-like 8B	AB185206|Arl8b|67166|ADP-ribosylation factor-like 8B	CT010337|Arl8b|67166|ADP-ribosylation factor-like 8B	AK203754|Arl8b|67166|ADP-ribosylation factor-like 8B
mm9_v1_chr4_+_43455122_43455148	0.151252	FOXN1.p2	BC099699|Tesk1|21754|testis specific protein kinase 1	NM_011571|Tesk1|21754|testis specific protein kinase 1
mm9_v1_chr11_-_102680467_102680523	0.150381	FOXN1.p2	BC050840|Gjc1|14615|gap junction protein, gamma 1	NM_001159382|Gjc1|14615|gap junction protein, gamma 1	BC023153|Gjc1|14615|gap junction protein, gamma 1	AY390397|Gjc1|14615|gap junction protein, gamma 1
mm9_v1_chr7_+_116094153_116094278	0.150115	FOXN1.p2	AK158865|BC049265|414075|cDNA sequence BC049265	BC030475|BC049265|414075|cDNA sequence BC049265	BC049265|BC049265|414075|cDNA sequence BC049265
mm9_v1_chr18_-_46358466_46358474	0.149837	FOXN1.p2	NM_001170855|Trim36|28105|tripartite motif-containing 36
mm9_v1_chr10_-_86168115_86168230	0.149639	FOXN1.p2	BC010445|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	M16370|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	J03297|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	NM_011631|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	BC011439|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK151413|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK150811|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK153550|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK160093|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK165975|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK168952|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK169090|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK159974|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chr9_-_63605917_63606020	0.149484	FOXN1.p2	BC022904|Smad3|17127|MAD homolog 3 (Drosophila)
mm9_v1_chr14_+_27457610_27457865	0.149234	FOXN1.p2	AK013892|Arf4|11843|ADP-ribosylation factor 4	AK002302|Arf4|11843|ADP-ribosylation factor 4	AK168793|Arf4|11843|ADP-ribosylation factor 4	NM_007479|Arf4|11843|ADP-ribosylation factor 4	AK081686|Arf4|11843|ADP-ribosylation factor 4	AK153011|Arf4|11843|ADP-ribosylation factor 4	BC115650|Arf4|11843|ADP-ribosylation factor 4	BC115651|Arf4|11843|ADP-ribosylation factor 4	D87901|Arf4|11843|ADP-ribosylation factor 4
mm9_v1_chr17_+_15636851_15636923	0.149153	FOXN1.p2	AK085037|Tbp|21374|TATA box binding protein	NM_013684|Tbp|21374|TATA box binding protein	BC016476|Tbp|21374|TATA box binding protein	AK089397|Tbp|21374|TATA box binding protein	BC050136|Tbp|21374|TATA box binding protein	U63933|Tbp|21374|TATA box binding protein	BC012685|Tbp|21374|TATA box binding protein
mm9_v1_chr14_+_76510684_76510739	0.14852	FOXN1.p2	AK032324|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	NM_013745|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	AK156205|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	AK009260|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	BC020364|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	BC056192|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	AF159549|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1
mm9_v1_chr2_-_64860728_64860875	0.147944	FOXN1.p2	BC138581|Grb14|50915|growth factor receptor bound protein 14	BC145913|Grb14|50915|growth factor receptor bound protein 14	AF155647|Grb14|50915|growth factor receptor bound protein 14	NM_016719|Grb14|50915|growth factor receptor bound protein 14	AK147041|Grb14|50915|growth factor receptor bound protein 14	AK010849|Grb14|50915|growth factor receptor bound protein 14	AK010903|Grb14|50915|growth factor receptor bound protein 14
mm9_v1_chr2_-_120229789_120229851	0.147762	FOXN1.p2	AK086738|Tmem87a|211499|transmembrane protein 87A	BC004047|Tmem87a|211499|transmembrane protein 87A	AK044591|Tmem87a|211499|transmembrane protein 87A	AK134268|Tmem87a|211499|transmembrane protein 87A	AK137137|Tmem87a|211499|transmembrane protein 87A	BC027354|Tmem87a|211499|transmembrane protein 87A	AK088559|Tmem87a|211499|transmembrane protein 87A	NM_001110496|Tmem87a|211499|transmembrane protein 87A	NM_001110497|Tmem87a|211499|transmembrane protein 87A	NM_173734|Tmem87a|211499|transmembrane protein 87A
mm9_v1_chr17_+_73185961_73186089	0.147572	FOXN1.p2	AK167998|Ypel5|383295|yippee-like 5 (Drosophila)	AK165943|Ypel5|383295|yippee-like 5 (Drosophila)	AK169241|Ypel5|383295|yippee-like 5 (Drosophila)	AK049096|Ypel5|383295|yippee-like 5 (Drosophila)	AK171010|Ypel5|383295|yippee-like 5 (Drosophila)	NM_027166|Ypel5|383295|yippee-like 5 (Drosophila)	AK046281|Ypel5|383295|yippee-like 5 (Drosophila)	AK049644|Ypel5|383295|yippee-like 5 (Drosophila)	AK169986|Ypel5|383295|yippee-like 5 (Drosophila)	AK137446|Ypel5|383295|yippee-like 5 (Drosophila)	AK010201|Ypel5|383295|yippee-like 5 (Drosophila)
mm9_v1_chr3_+_102799658_102799677	0.14619	FOXN1.p2	AK014113|Sike1|66641|suppressor of IKBKE 1	AK033553|Sike1|66641|suppressor of IKBKE 1	NM_025679|Sike1|66641|suppressor of IKBKE 1	AK017452|Sike1|66641|suppressor of IKBKE 1	AK017694|Sike1|66641|suppressor of IKBKE 1	BC004090|Sike1|66641|suppressor of IKBKE 1	AK019264|Sike1|66641|suppressor of IKBKE 1
mm9_v1_chr5_+_13399301_13399308	0.146044	FOXN1.p2	D85028|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	NM_009152|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr8_+_124474475_124474479	0.145079	FOXN1.p2	AK170884|Banp|53325|BTG3 associated nuclear protein	AF091234|Banp|53325|BTG3 associated nuclear protein	AF235503|Banp|53325|BTG3 associated nuclear protein
mm9_v1_chr2_-_37214772_37214851	0.143713	FOXN1.p2	AK004704|Pdcl|67466|phosducin-like	NM_026176|Pdcl|67466|phosducin-like
mm9_v1_chr5_-_38550627_38550759	0.143642	FOXN1.p2	AF035683|Nsg1|18196|neuron specific gene family member 1	AK144503|Nsg1|18196|neuron specific gene family member 1	BC008272|Nsg1|18196|neuron specific gene family member 1	AK078054|Nsg1|18196|neuron specific gene family member 1	AK148941|Nsg1|18196|neuron specific gene family member 1	AX775765|Nsg1|18196|neuron specific gene family member 1	NM_010942|Nsg1|18196|neuron specific gene family member 1
mm9_v1_chr9_-_45714959_45715007	0.143459	FOXN1.p2	AK051527|Rnf214|235315|ring finger protein 214	NM_178709|Rnf214|235315|ring finger protein 214	AK046997|Rnf214|235315|ring finger protein 214	AK030208|Rnf214|235315|ring finger protein 214
mm9_v1_chr16_-_23127779_23127814	0.143439	FOXN1.p2	AK146954|Rfc4|106344|replication factor C (activator 1) 4	AK147030|Rfc4|106344|replication factor C (activator 1) 4	BC003335|Rfc4|106344|replication factor C (activator 1) 4	NM_145480|Rfc4|106344|replication factor C (activator 1) 4
mm9_v1_chr5_+_31797101_31797147	0.142673	FOXN1.p2	AK010393|Gpn1|74254|GPN-loop GTPase 1	AK146686|Gpn1|74254|GPN-loop GTPase 1	AK163635|Gpn1|74254|GPN-loop GTPase 1	BC064761|Gpn1|74254|GPN-loop GTPase 1	AK077645|Gpn1|74254|GPN-loop GTPase 1	BC020174|Gpn1|74254|GPN-loop GTPase 1	NM_133756|Gpn1|74254|GPN-loop GTPase 1	AK145957|Gpn1|74254|GPN-loop GTPase 1	BC096466|Gpn1|74254|GPN-loop GTPase 1
mm9_v1_chr10_+_78037712_78037795	0.14167	FOXN1.p2	AK133553|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like	AK146075|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like	AK169899|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like	AK143918|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like	AK087956|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like
mm9_v1_chr14_+_30791522_30791616	0.141234	FOXN1.p2	NM_027493|Actr8|56249|ARP8 actin-related protein 8 homolog (S. cerevisiae)	AK017815|Actr8|56249|ARP8 actin-related protein 8 homolog (S. cerevisiae)	AK045862|Actr8|56249|ARP8 actin-related protein 8 homolog (S. cerevisiae)	BC027281|Actr8|56249|ARP8 actin-related protein 8 homolog (S. cerevisiae)
mm9_v1_chr17_-_32458048_32458134	0.140951	FOXN1.p2	BC078448|Akap8|56399|A kinase (PRKA) anchor protein 8	BC060170|Akap8|56399|A kinase (PRKA) anchor protein 8	BC042602|Akap8|56399|A kinase (PRKA) anchor protein 8	BC125521|Akap8|56399|A kinase (PRKA) anchor protein 8	BC137746|Akap8|56399|A kinase (PRKA) anchor protein 8	AK143300|Akap8|56399|A kinase (PRKA) anchor protein 8	AB028920|Akap8|56399|A kinase (PRKA) anchor protein 8	AK004801|Akap8|56399|A kinase (PRKA) anchor protein 8	BC054433|Akap8|56399|A kinase (PRKA) anchor protein 8	AK089092|Akap8|56399|A kinase (PRKA) anchor protein 8	NM_019774|Akap8|56399|A kinase (PRKA) anchor protein 8
mm9_v1_chr9_+_75862772_75862821	0.140566	FOXN1.p2	BC037381|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	NM_173731|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK141622|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK164164|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm9_v1_chr10_+_51742333_51742337	0.140302	FOXN1.p2	AK052987|Vgll2|215031|vestigial like 2 homolog (Drosophila)	AK048390|Vgll2|215031|vestigial like 2 homolog (Drosophila)
mm9_v1_chr19_-_46073001_46073107	0.139968	FOXN1.p2	
mm9_v1_chr2_+_156688814_156688934	0.137957	FOXN1.p2	NM_026124|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK003568|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK078178|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK031002|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK002452|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK155559|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	BC019445|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene
mm9_v1_chr15_-_64753721_64753861	0.137738	FOXN1.p2	U85021|Adcy8|11514|adenylate cyclase 8	BC094231|Adcy8|11514|adenylate cyclase 8	AK163443|Adcy8|11514|adenylate cyclase 8	AK138244|Adcy8|11514|adenylate cyclase 8	NM_009623|Adcy8|11514|adenylate cyclase 8
mm9_v1_chr7_-_107269928_107270049	0.137562	FOXN1.p2	AK180448|Pold3|67967|polymerase (DNA-directed), delta 3, accessory subunit	AK189114|Pold3|67967|polymerase (DNA-directed), delta 3, accessory subunit	AK168179|Pold3|67967|polymerase (DNA-directed), delta 3, accessory subunit	AK088385|Pold3|67967|polymerase (DNA-directed), delta 3, accessory subunit	AK010805|Pold3|67967|polymerase (DNA-directed), delta 3, accessory subunit	AK031778|Pold3|67967|polymerase (DNA-directed), delta 3, accessory subunit	NM_133692|Pold3|67967|polymerase (DNA-directed), delta 3, accessory subunit	BC055325|Pold3|67967|polymerase (DNA-directed), delta 3, accessory subunit	AF294329|Pold3|67967|polymerase (DNA-directed), delta 3, accessory subunit
mm9_v1_chr9_+_106270889_106271052	0.137523	FOXN1.p2	AK140372|Dusp7|235584|dual specificity phosphatase 7	NM_153459|Dusp7|235584|dual specificity phosphatase 7
mm9_v1_chr3_-_57651409_57651501	0.137085	FOXN1.p2	AJ272203|Pfn2|18645|profilin 2	BC024363|Pfn2|18645|profilin 2	AK132651|Pfn2|18645|profilin 2
mm9_v1_chr10_-_62254998_62255005	0.136734	FOXN1.p2	AF465615|Ccar1|67500|cell division cycle and apoptosis regulator 1	AK012111|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC060130|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC039939|Ccar1|67500|cell division cycle and apoptosis regulator 1
mm9_v1_chr6_-_127718746_127718746	0.136439	FOXN1.p2	BC060250|Prmt8|381813|protein arginine N-methyltransferase 8	NM_201371|Prmt8|381813|protein arginine N-methyltransferase 8
mm9_v1_chr11_-_95574067_95574079	0.13597	FOXN1.p2	AK027957|1110035M17Rik|432396|RIKEN cDNA 1110035M17 gene
mm9_v1_chr7_+_89319717_89319836	0.135574	FOXN1.p2	NM_017400|Sh3gl3|20408|SH3-domain GRB2-like 3	AK012114|Sh3gl3|20408|SH3-domain GRB2-like 3	BC100453|Sh3gl3|20408|SH3-domain GRB2-like 3
mm9_v1_chr1_+_173275837_173275844	0.135342	FOXN1.p2	Y17393|Pfdn2|18637|prefoldin 2	BC026839|Pfdn2|18637|prefoldin 2
mm9_v1_chrX_+_17739762_17739792	0.135337	FOXN1.p2	AK164941|Kdm6a|22289|4lysine (K)-specific demethylase 6A	AK144654|Kdm6a|22289|4lysine (K)-specific demethylase 6A	AK080370|Kdm6a|22289|4lysine (K)-specific demethylase 6A	BC053433|Kdm6a|22289|4lysine (K)-specific demethylase 6A	NM_009483|Kdm6a|22289|4lysine (K)-specific demethylase 6A
mm9_v1_chr17_-_24833089_24833122	0.134242	FOXN1.p2	BC023941|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)	AK146579|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)	NM_023040|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)
mm9_v1_chr6_+_115551969_115552002	0.134167	FOXN1.p2	AK011295|Mkrn2|67027|makorin, ring finger protein, 2	AF277171|Mkrn2|67027|makorin, ring finger protein, 2
mm9_v1_chr9_+_69837253_69837421	0.134068	FOXN1.p2	AK169609|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK054288|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	NM_016787|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK159745|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK014659|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK161116|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	BC012670|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AF035207|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr4_-_58924786_58924804	0.133723	FOXN1.p2	AK038775|AI314180|230249|expressed sequence AI314180	AK043020|AI314180|230249|expressed sequence AI314180
mm9_v1_chr18_-_63851841_63852091	0.13333	FOXN1.p2	AF052660|Txnl1|53382|thioredoxin-like 1	AK144211|Txnl1|53382|thioredoxin-like 1	AK150326|Txnl1|53382|thioredoxin-like 1	AK168712|Txnl1|53382|thioredoxin-like 1	AK150887|Txnl1|53382|thioredoxin-like 1	AK152101|Txnl1|53382|thioredoxin-like 1	AK150983|Txnl1|53382|thioredoxin-like 1	AK167954|Txnl1|53382|thioredoxin-like 1	AK051698|Txnl1|53382|thioredoxin-like 1	AK029807|Txnl1|53382|thioredoxin-like 1	NM_016792|Txnl1|53382|thioredoxin-like 1	BC061123|Txnl1|53382|thioredoxin-like 1
mm9_v1_chrX_+_71516128_71516339	0.132557	FOXN1.p2	NM_052835|Rpl10|110954|ribosomal protein 10	AK146217|Rpl10|110954|ribosomal protein 10	AK011022|Rpl10|110954|ribosomal protein 10	AK088777|Rpl10|110954|ribosomal protein 10	AK144831|Rpl10|110954|ribosomal protein 10	AK151416|Rpl10|110954|ribosomal protein 10	AK151655|Rpl10|110954|ribosomal protein 10	AK152123|Rpl10|110954|ribosomal protein 10	AK152854|Rpl10|110954|ribosomal protein 10	AK153345|Rpl10|110954|ribosomal protein 10	AK160618|Rpl10|110954|ribosomal protein 10	AK167966|Rpl10|110954|ribosomal protein 10	AK168854|Rpl10|110954|ribosomal protein 10	BC086917|Rpl10|110954|ribosomal protein 10	M93980|Rpl10|110954|ribosomal protein 10	AK014054|Rpl10|110954|ribosomal protein 10	AK151736|Rpl10|110954|ribosomal protein 10	AK166610|Rpl10|110954|ribosomal protein 10	AK168250|Rpl10|110954|ribosomal protein 10	AK012561|Rpl10|110954|ribosomal protein 10	AK167239|Rpl10|110954|ribosomal protein 10	BC092383|Rpl10|110954|ribosomal protein 10	BC098204|Rpl10|110954|ribosomal protein 10	X75312|Rpl10|110954|ribosomal protein 10	BC048872|Rpl10|110954|ribosomal protein 10	BC099437|Rpl10|110954|ribosomal protein 10	BC024901|Rpl10|110954|ribosomal protein 10	BC082293|Rpl10|110954|ribosomal protein 10	BC083327|Rpl10|110954|ribosomal protein 10	BC006068|Rpl10|110954|ribosomal protein 10
mm9_v1_chr11_-_96805259_96805283	0.131621	FOXN1.p2	BC010785|Pnpo|103711|pyridoxine 5'-phosphate oxidase	AK154004|Pnpo|103711|pyridoxine 5'-phosphate oxidase
mm9_v1_chr7_-_87516011_87516144	0.131531	FOXN1.p2	AK044028|Man2a2|140481|mannosidase 2, alpha 2	NM_172903|Man2a2|140481|mannosidase 2, alpha 2	AK029913|Man2a2|140481|mannosidase 2, alpha 2
mm9_v1_chr14_-_62175657_62175722	0.131279	FOXN1.p2	AK018153|6330409N04Rik|66674|RIKEN cDNA 6330409N04 gene	NM_025697|6330409N04Rik|66674|RIKEN cDNA 6330409N04 gene
mm9_v1_chr1_-_173177238_173177241	0.129715	FOXN1.p2	AK167016|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr12_+_111839571_111839706	0.129663	FOXN1.p2	NM_030238|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1	AY004877|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1	AK045747|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1	AK052908|Dync1h1|13424|dynein cytoplasmic 1 heavy chain 1
mm9_v1_chr14_+_25309895_25309936	0.128812	FOXN1.p2	NM_011297|Rps24|20088|ribosomal protein S24	NM_207634|Rps24|20088|ribosomal protein S24	NM_207635|Rps24|20088|ribosomal protein S24
mm9_v1_chr14_+_14845004_14845173	0.128749	FOXN1.p2	AK046679|Atxn7|246103|ataxin 7	NM_139227|Atxn7|246103|ataxin 7	BC137846|Atxn7|246103|ataxin 7
mm9_v1_chr11_-_106992869_106992950	0.128466	FOXN1.p2	BC037661|Bptf|207165|bromodomain PHD finger transcription factor	BC046973|Bptf|207165|bromodomain PHD finger transcription factor
mm9_v1_chr19_+_59017874_59017915	0.127492	FOXN1.p2	NM_178689|Eno4|226265|enolase 4	AK032395|Eno4|226265|enolase 4
mm9_v1_chr13_-_95992547_95992641	0.127269	FOXN1.p2	AK083166|Pde8b|218461|phosphodiesterase 8B
mm9_v1_chr2_-_28438389_28438521	0.127128	FOXN1.p2	AK045419|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr4_-_62069611_62069739	0.125967	FOXN1.p2	AK012627|Cdc26|66440|cell division cycle 26	NM_139291|Cdc26|66440|cell division cycle 26	AK135556|Cdc26|66440|cell division cycle 26	AK047055|Cdc26|66440|cell division cycle 26
mm9_v1_chr12_+_33063653_33063723	0.125933	FOXN1.p2	NM_001162903|2010109K11Rik|72123|RIKEN cDNA 2010109K11 gene
mm9_v1_chr11_+_120345915_120346014	0.125857	FOXN1.p2	AK134816|Mrpl12|56282|mitochondrial ribosomal protein L12	AK166969|Mrpl12|56282|mitochondrial ribosomal protein L12	AK002757|Mrpl12|56282|mitochondrial ribosomal protein L12	AK028168|Mrpl12|56282|mitochondrial ribosomal protein L12	AK168337|Mrpl12|56282|mitochondrial ribosomal protein L12	BC005712|Mrpl12|56282|mitochondrial ribosomal protein L12	NM_027204|Mrpl12|56282|mitochondrial ribosomal protein L12	BC019565|Mrpl12|56282|mitochondrial ribosomal protein L12
mm9_v1_chr18_-_84758848_84758918	0.125462	FOXN1.p2	AK032536|Zfp407|240476|zinc finger protein 407	NM_001033341|Zfp407|240476|zinc finger protein 407
mm9_v1_chr16_+_58408533_58408602	0.125253	FOXN1.p2	AF442820|Dcbld2|73379|discoidin, CUB and LCCL domain containing 2	AF387548|Dcbld2|73379|discoidin, CUB and LCCL domain containing 2
mm9_v1_chr11_-_69609411_69609422	0.125227	FOXN1.p2	AK087554|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr8_+_108583449_108583790	0.125183	FOXN1.p2	NM_010901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK147708|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK155087|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK051602|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK134054|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK039929|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK220187|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120900|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	D85612|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887629|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887630|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887631|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
mm9_v1_chr11_+_116532973_116533009	0.124414	FOXN1.p2	AK007675|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	AK013681|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	AK037979|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	BC055707|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene	AK088915|1810032O08Rik|66293|RIKEN cDNA 1810032O08 gene
mm9_v1_chr1_+_121423003_121423069	0.124293	FOXN1.p2	AK010846|Tmem185b|226351|transmembrane protein 185B
mm9_v1_chr13_+_3537308_3537410	0.124052	FOXN1.p2	NM_008112|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK143681|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK150655|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK167659|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK149958|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK078514|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK079690|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK090083|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK137761|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK143633|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK013104|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK159734|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK166317|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK007871|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK078144|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK083063|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK150356|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK152250|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	BC055341|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	BC024971|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK153381|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK169299|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr11_+_59015985_59016052	0.122866	FOXN1.p2	AK012143|Mrpl55|67212|mitochondrial ribosomal protein L55	AK012885|Mrpl55|67212|mitochondrial ribosomal protein L55	NM_026035|Mrpl55|67212|mitochondrial ribosomal protein L55	BC028538|Mrpl55|67212|mitochondrial ribosomal protein L55
mm9_v1_chr12_+_52792192_52792204	0.122302	FOXN1.p2	BC053339|Ap4s1|11782|adaptor-related protein complex AP-4, sigma 1	AK005283|Ap4s1|11782|adaptor-related protein complex AP-4, sigma 1
mm9_v1_chr11_-_93746982_93747028	0.121693	FOXN1.p2	AK154637|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	AK032265|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr5_+_129526311_129526363	0.120733	FOXN1.p2	AK012268|Ran|19384|RAN, member RAS oncogene family	AK010569|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr7_+_16633755_16633793	0.119597	FOXN1.p2	AK008102|2010004M13Rik|76511|RIKEN cDNA 2010004M13 gene
mm9_v1_chr7_+_16986478_16986599	0.119534	FOXN1.p2	NM_198631|Zc3h4|330474|zinc finger CCCH-type containing 4	AK151148|Zc3h4|330474|zinc finger CCCH-type containing 4	AK151306|Zc3h4|330474|zinc finger CCCH-type containing 4	BC057627|Zc3h4|330474|zinc finger CCCH-type containing 4
mm9_v1_chr2_+_109857966_109858261	0.119112	FOXN1.p2	AK147056|Ccdc34|68201|coiled-coil domain containing 34	NM_026613|Ccdc34|68201|coiled-coil domain containing 34	BC108339|Ccdc34|68201|coiled-coil domain containing 34	AK019172|Ccdc34|68201|coiled-coil domain containing 34	AK033555|Ccdc34|68201|coiled-coil domain containing 34	AK019247|Ccdc34|68201|coiled-coil domain containing 34	AK012383|Ccdc34|68201|coiled-coil domain containing 34	BC062248|Ccdc34|68201|coiled-coil domain containing 34	AK014021|Ccdc34|68201|coiled-coil domain containing 34	BC089458|Ccdc34|68201|coiled-coil domain containing 34	BC049229|Ccdc34|68201|coiled-coil domain containing 34
mm9_v1_chr13_-_76081244_76081314	0.11862	FOXN1.p2	BC005664|Rhobtb3|73296|Rho-related BTB domain containing 3	BC050836|Rhobtb3|73296|Rho-related BTB domain containing 3	NM_028493|Rhobtb3|73296|Rho-related BTB domain containing 3	AK129234|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr10_-_25798407_25798455	0.117714	FOXN1.p2	AK032569|Tmem200a|77220|transmembrane protein 200A	AK163932|Tmem200a|77220|transmembrane protein 200A
mm9_v1_chr2_+_112333086_112333189	0.117679	FOXN1.p2	AK006808|Aven|74268|apoptosis, caspase activation inhibitor	NM_028844|Aven|74268|apoptosis, caspase activation inhibitor	BC100725|Aven|74268|apoptosis, caspase activation inhibitor	BC100735|Aven|74268|apoptosis, caspase activation inhibitor
mm9_v1_chr10_-_118677059_118677116	0.117189	FOXN1.p2	AK129225|Cand1|71902|cullin associated and neddylation disassociated 1	AK144869|Cand1|71902|cullin associated and neddylation disassociated 1	AK158080|Cand1|71902|cullin associated and neddylation disassociated 1	NM_027994|Cand1|71902|cullin associated and neddylation disassociated 1
mm9_v1_chr9_-_45714409_45714473	0.11688	FOXN1.p2	BC094247|Rnf214|235315|ring finger protein 214	AK033867|Rnf214|235315|ring finger protein 214
mm9_v1_chr4_-_62186095_62186117	0.116475	FOXN1.p2	AK007693|Pole3|59001|polymerase (DNA directed), epsilon 3 (p17 subunit)
mm9_v1_chr10_-_7400836_7400969	0.115746	FOXN1.p2	AK030763|BC020402|407824|cDNA sequence BC020402	BC020402|BC020402|407824|cDNA sequence BC020402	AK132475|BC020402|407824|cDNA sequence BC020402
mm9_v1_chr9_+_110235804_110235881	0.115623	FOXN1.p2	AK150275|Scap|235623|SREBF chaperone	AK152478|Scap|235623|SREBF chaperone	AK153330|Scap|235623|SREBF chaperone	BC072633|Scap|235623|SREBF chaperone	BC070437|Scap|235623|SREBF chaperone	AK146658|Scap|235623|SREBF chaperone
mm9_v1_chr5_+_139676589_139676634	0.11544	FOXN1.p2	AK014585|Sun1|77053|Sad1 and UNC84 domain containing 1	AK036187|Sun1|77053|Sad1 and UNC84 domain containing 1	AK161959|Sun1|77053|Sad1 and UNC84 domain containing 1	AK162533|Sun1|77053|Sad1 and UNC84 domain containing 1	AK167686|Sun1|77053|Sad1 and UNC84 domain containing 1	BC048156|Sun1|77053|Sad1 and UNC84 domain containing 1	BC047928|Sun1|77053|Sad1 and UNC84 domain containing 1	NM_024451|Sun1|77053|Sad1 and UNC84 domain containing 1	AK160281|Sun1|77053|Sad1 and UNC84 domain containing 1
mm9_v1_chr1_-_121318824_121318824	0.115351	FOXN1.p2	AK132352|Inhbb|16324|inhibin beta-B	NM_008381|Inhbb|16324|inhibin beta-B
mm9_v1_chr11_+_64792527_64792682	0.115273	FOXN1.p2	AK156730|Elac2|68626|elaC homolog 2 (E. coli)	NM_023479|Elac2|68626|elaC homolog 2 (E. coli)	AK172604|Elac2|68626|elaC homolog 2 (E. coli)	BC023134|Elac2|68626|elaC homolog 2 (E. coli)	AF308696|Elac2|68626|elaC homolog 2 (E. coli)	BC048235|Elac2|68626|elaC homolog 2 (E. coli)
mm9_v1_chr19_+_46576137_46576194	0.115053	FOXN1.p2	NM_053100|Trim8|93679|tripartite motif-containing 8	AK155303|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr15_-_100325669_100325697	0.114995	FOXN1.p2	BC035295|Csrnp2|207785|cysteine-serine-rich nuclear protein 2	NM_153407|Csrnp2|207785|cysteine-serine-rich nuclear protein 2	AK146924|Csrnp2|207785|cysteine-serine-rich nuclear protein 2	AK050864|Csrnp2|207785|cysteine-serine-rich nuclear protein 2	AK166557|Csrnp2|207785|cysteine-serine-rich nuclear protein 2
mm9_v1_chr4_+_138908512_138908512	0.113199	FOXN1.p2	AK049061|C230096C10Rik|230866|RIKEN cDNA C230096C10 gene	AK077496|C230096C10Rik|230866|RIKEN cDNA C230096C10 gene
mm9_v1_chr4_+_137772474_137772594	0.112722	FOXN1.p2	AK150784|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK166161|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	NM_001122896|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	NM_010470|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK004938|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK028181|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK050234|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK075725|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK043260|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK161041|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	BC020024|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	BC107687|Hp1bp3|15441|heterochromatin protein 1, binding protein 3
mm9_v1_chr6_+_83065466_83065564	0.111779	FOXN1.p2	AK144946|Mogs|57377|mannosyl-oligosaccharide glucosidase	BC051949|Mogs|57377|mannosyl-oligosaccharide glucosidase	NM_020619|Mogs|57377|mannosyl-oligosaccharide glucosidase	AK157286|Mogs|57377|mannosyl-oligosaccharide glucosidase
mm9_v1_chrX_+_91612443_91612460	0.110979	FOXN1.p2	NM_026673|Apoo|68316|apolipoprotein O
mm9_v1_chr7_-_27951724_27951820	0.110582	FOXN1.p2	AF453879|Egln2|112406|EGL nine homolog 2 (C. elegans)	BC023299|Egln2|112406|EGL nine homolog 2 (C. elegans)	BC086764|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK075582|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK159206|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK167477|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK152223|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK152056|Egln2|112406|EGL nine homolog 2 (C. elegans)	AJ310547|Egln2|112406|EGL nine homolog 2 (C. elegans)	NM_053208|Egln2|112406|EGL nine homolog 2 (C. elegans)
mm9_v1_chr9_-_86465373_86465470	0.110087	FOXN1.p2	BC138700|Pgm3|109785|phosphoglucomutase 3	AK051706|Pgm3|109785|phosphoglucomutase 3	AK032776|Pgm3|109785|phosphoglucomutase 3	AK049337|Pgm3|109785|phosphoglucomutase 3	AK169141|Pgm3|109785|phosphoglucomutase 3	AK169082|Pgm3|109785|phosphoglucomutase 3	AK169787|Pgm3|109785|phosphoglucomutase 3	AK165513|Pgm3|109785|phosphoglucomutase 3	AK013402|Pgm3|109785|phosphoglucomutase 3	AK036561|Pgm3|109785|phosphoglucomutase 3	AK049758|Pgm3|109785|phosphoglucomutase 3	AK028066|Pgm3|109785|phosphoglucomutase 3	AK160913|Pgm3|109785|phosphoglucomutase 3	AK043547|Pgm3|109785|phosphoglucomutase 3	NM_001163746|Pgm3|109785|phosphoglucomutase 3	NM_028352|Pgm3|109785|phosphoglucomutase 3
mm9_v1_chr1_-_64167952_64168022	0.109305	FOXN1.p2	BC019604|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	NM_033563|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC004700|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC040794|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AF338369|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK149362|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr4_-_41261874_41261885	0.10927	FOXN1.p2	AK005099|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK090028|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK030173|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK143635|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr18_+_35931332_35931453	0.107794	FOXN1.p2	AK172088|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	AK148089|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2	AK162093|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2
mm9_v1_chr6_-_7643156_7643286	0.10675	FOXN1.p2	AK167933|Asns|27053|asparagine synthetase	AK167524|Asns|27053|asparagine synthetase	BC005552|Asns|27053|asparagine synthetase	NM_012055|Asns|27053|asparagine synthetase	U38940|Asns|27053|asparagine synthetase	AK160459|Asns|27053|asparagine synthetase	AK076207|Asns|27053|asparagine synthetase
mm9_v1_chrX_+_7419025_7419257	0.106681	FOXN1.p2	AK010750|Otud5|54644|OTU domain containing 5	AK149777|Otud5|54644|OTU domain containing 5	AK171874|Otud5|54644|OTU domain containing 5	BC051111|Otud5|54644|OTU domain containing 5	AK169921|Otud5|54644|OTU domain containing 5
mm9_v1_chr3_+_105255444_105255490	0.106276	FOXN1.p2	AK033962|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr6_+_83745142_83745245	0.105469	FOXN1.p2	NM_001164187|Nagk|56174|N-acetylglucosamine kinase	AK155292|Nagk|56174|N-acetylglucosamine kinase	BC004689|Nagk|56174|N-acetylglucosamine kinase	AJ242911|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chr7_-_100022714_100022747	0.105022	FOXN1.p2	BC066148|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene	AK154915|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene	AK014608|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene	DQ400346|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene	NM_001080995|4632434I11Rik|74041|RIKEN cDNA 4632434I11 gene
mm9_v1_chr16_+_32332294_32332380	0.104671	FOXN1.p2	NM_177633|Ubxn7|224111|UBX domain protein 7	AK147730|Ubxn7|224111|UBX domain protein 7	BC062904|Ubxn7|224111|UBX domain protein 7
mm9_v1_chr6_-_124364880_124365084	0.10398	FOXN1.p2	AK088886|Pex5|19305|peroxisomal biogenesis factor 5	AK145361|Pex5|19305|peroxisomal biogenesis factor 5	BC029748|Pex5|19305|peroxisomal biogenesis factor 5	AK145111|Pex5|19305|peroxisomal biogenesis factor 5	AJ416473|Pex5|19305|peroxisomal biogenesis factor 5	AK161470|Pex5|19305|peroxisomal biogenesis factor 5	NM_008995|Pex5|19305|peroxisomal biogenesis factor 5	NM_175933|Pex5|19305|peroxisomal biogenesis factor 5
mm9_v1_chr2_+_155890933_155891049	0.103843	FOXN1.p2	AK220494|Spag4|245865|sperm associated antigen 4	NM_139151|Spag4|245865|sperm associated antigen 4	AK043812|Spag4|245865|sperm associated antigen 4	AK028080|Spag4|245865|sperm associated antigen 4	BC107321|Spag4|245865|sperm associated antigen 4
mm9_v1_chr3_+_89263039_89263081	0.103688	FOXN1.p2	NM_026784|Pmvk|68603|phosphomevalonate kinase
mm9_v1_chr15_+_80085923_80086003	0.103656	FOXN1.p2	AK146193|Atf4|11911|activating transcription factor 4	AK144777|Atf4|11911|activating transcription factor 4	AK155254|Atf4|11911|activating transcription factor 4	AK138657|Atf4|11911|activating transcription factor 4	AK150231|Atf4|11911|activating transcription factor 4	X61507|Atf4|11911|activating transcription factor 4	AK156298|Atf4|11911|activating transcription factor 4	M94087|Atf4|11911|activating transcription factor 4	BC031542|Atf4|11911|activating transcription factor 4	AK157839|Atf4|11911|activating transcription factor 4	AK195416|Atf4|11911|activating transcription factor 4
mm9_v1_chr11_+_60541880_60542010	0.103491	FOXN1.p2	NM_001009927|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK156917|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK171444|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	BC088984|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)
mm9_v1_chr1_-_82287067_82287145	0.103484	FOXN1.p2	L24563|Irs1|16367|insulin receptor substrate 1
mm9_v1_chrX_-_132706705_132706789	0.103383	FOXN1.p2	AK137039|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK012030|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK027927|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK083347|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK156414|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK014459|Tceal8|66684|transcription elongation factor A (SII)-like 8	BC027269|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK076203|Tceal8|66684|transcription elongation factor A (SII)-like 8	NM_001168578|Tceal8|66684|transcription elongation factor A (SII)-like 8	NM_025703|Tceal8|66684|transcription elongation factor A (SII)-like 8
mm9_v1_chr3_+_41546539_41546585	0.103053	FOXN1.p2	AK138405|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	NM_001099785|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	NM_027271|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	NM_028667|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK085404|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK012700|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK039725|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK045813|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK144064|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK044548|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	BC062244|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed
mm9_v1_chr13_+_83861149_83861193	0.101672	FOXN1.p2	
mm9_v1_chr15_-_27560282_27560465	0.101218	FOXN1.p2	AK134955|Fam105b|432940|family with sequence similarity 105, member B	AK150371|Fam105b|432940|family with sequence similarity 105, member B	NM_001013792|Fam105b|432940|family with sequence similarity 105, member B
mm9_v1_chr13_+_81922310_81922339	0.100497	FOXN1.p2	Y12474|Cetn3|12626|centrin 3
mm9_v1_chr7_+_146038277_146038301	0.100196	FOXN1.p2	AK005033|Ppp2r2d|52432|protein phosphatase 2, regulatory subunit B, delta isoform
mm9_v1_chr8_-_27126047_27126068	0.0999684	FOXN1.p2	AK153252|Fnta|14272|farnesyltransferase, CAAX box, alpha	D49744|Fnta|14272|farnesyltransferase, CAAX box, alpha
mm9_v1_chr13_-_92901606_92901650	0.0996845	FOXN1.p2	AK158472|Rasgrf2|19418|RAS protein-specific guanine nucleotide-releasing factor 2
mm9_v1_chr2_+_144353506_144353513	0.0995628	FOXN1.p2	AK013084|Polr3f|70408|polymerase (RNA) III (DNA directed) polypeptide F
mm9_v1_chr8_+_73222841_73222868	0.0995367	FOXN1.p2	BC023211|Jund|16478|Jun proto-oncogene related gene d	BC094068|Jund|16478|Jun proto-oncogene related gene d	BC010572|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr19_+_36422888_36423026	0.0989299	FOXN1.p2	AK002387|Pcgf5|76073|polycomb group ring finger 5	AK080025|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chr2_-_164860303_164860336	0.0988808	FOXN1.p2	AK173226|Ncoa5|228869|nuclear receptor coactivator 5
mm9_v1_chr2_+_104430617_104430708	0.0988766	FOXN1.p2	AK158169|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	NM_001037326|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	NM_145529|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	NM_177253|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	BC003241|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	BC058605|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	AK028899|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm9_v1_chr14_-_47896506_47896522	0.0987226	FOXN1.p2	AK052690|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1
mm9_v1_chr12_+_88784853_88784880	0.097901	FOXN1.p2	AK007699|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC116739|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC116741|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC048513|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	AK028746|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC065396|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	AJ293625|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC100567|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene
mm9_v1_chr15_-_98126513_98126591	0.0978553	FOXN1.p2	AK036826|Zfp641|239652|zinc finger protein 641	BC111896|Zfp641|239652|zinc finger protein 641	BC112418|Zfp641|239652|zinc finger protein 641	NM_173769|Zfp641|239652|zinc finger protein 641	AK087530|Zfp641|239652|zinc finger protein 641	AK136402|Zfp641|239652|zinc finger protein 641
mm9_v1_chrX_-_54646073_54646213	0.097837	FOXN1.p2	AK207357|Rbmx|19655|RNA binding motif protein, X chromosome	AJ237846|Rbmx|19655|RNA binding motif protein, X chromosome	AJ237847|Rbmx|19655|RNA binding motif protein, X chromosome	AK165006|Rbmx|19655|RNA binding motif protein, X chromosome	BC003710|Rbmx|19655|RNA binding motif protein, X chromosome	AK083899|Rbmx|19655|RNA binding motif protein, X chromosome	AK135164|Rbmx|19655|RNA binding motif protein, X chromosome	NM_001166623|Rbmx|19655|RNA binding motif protein, X chromosome	NM_011252|Rbmx|19655|RNA binding motif protein, X chromosome
mm9_v1_chr11_-_57982024_57982049	0.0977883	FOXN1.p2	NM_001166669|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166670|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166671|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_172558|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr8_-_94879643_94879671	0.097252	FOXN1.p2	AK181465|4933436C20Rik|71296|RIKEN cDNA 4933436C20 gene
mm9_v1_chr7_+_73205454_73205492	0.097136	FOXN1.p2	BC013777|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	BC029642|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AF230356|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'
mm9_v1_chr19_-_14671832_14671910	0.0970656	FOXN1.p2	AF229633|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr9_-_86775154_86775279	0.0970432	FOXN1.p2	M83985|Snap91|20616|synaptosomal-associated protein 91	NM_013669|Snap91|20616|synaptosomal-associated protein 91	BC031773|Snap91|20616|synaptosomal-associated protein 91	AK159570|Snap91|20616|synaptosomal-associated protein 91	AK147087|Snap91|20616|synaptosomal-associated protein 91
mm9_v1_chr2_+_139502919_139502927	0.0968779	FOXN1.p2	AK044859|Ism1|319909|isthmin 1 homolog (zebrafish)
mm9_v1_chr7_-_134655863_134655912	0.0964928	FOXN1.p2	BC049754|1700008J07Rik|629159|RIKEN cDNA 1700008J07 gene	AK131716|1700008J07Rik|629159|RIKEN cDNA 1700008J07 gene	AK005774|1700008J07Rik|629159|RIKEN cDNA 1700008J07 gene
mm9_v1_chr11_+_75401554_75401692	0.0963675	FOXN1.p2	AK144618|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152089|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK153569|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK167760|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152874|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK165659|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168720|Pitpna|18738|phosphatidylinositol transfer protein, alpha	U96725|Pitpna|18738|phosphatidylinositol transfer protein, alpha	NM_008850|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK149745|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK151496|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168187|Pitpna|18738|phosphatidylinositol transfer protein, alpha	BC056171|Pitpna|18738|phosphatidylinositol transfer protein, alpha
mm9_v1_chr4_+_147315190_147315222	0.0961086	FOXN1.p2	AK194052|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene
mm9_v1_chr1_-_173177236_173177237	0.0958079	FOXN1.p2	AK150431|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	AK165426|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr1_-_180267841_180267909	0.0956666	FOXN1.p2	AF073992|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK159956|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK037517|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK168657|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK029944|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK159084|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr5_+_30481786_30481870	0.0955969	FOXN1.p2	AK083164|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	AK168594|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	AK083767|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	AK171803|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	AK076814|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	AK150889|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	AK169637|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	BC005585|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	NM_145558|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	AK033462|Hadhb|231086|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit
mm9_v1_chr16_+_81200909_81200967	0.0954429	FOXN1.p2	NM_001113208|Ncam2|17968|neural cell adhesion molecule 2	NM_010954|Ncam2|17968|neural cell adhesion molecule 2
mm9_v1_chr15_+_80086643_80086644	0.0951806	FOXN1.p2	L13791|Atf4|11911|activating transcription factor 4
mm9_v1_chr18_+_35278585_35278617	0.0948569	FOXN1.p2	BC105576|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	AK004623|Ctnna1|12385|catenin (cadherin associated protein), alpha 1
mm9_v1_chr1_-_163181313_163181346	0.0948085	FOXN1.p2	AK157820|Prdx6|11758|peroxiredoxin 6	Y12883|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr11_+_70577932_70578003	0.094522	FOXN1.p2	AK045753|Zfp3|193043|zinc finger protein 3	NM_177565|Zfp3|193043|zinc finger protein 3	BC096463|Zfp3|193043|zinc finger protein 3
mm9_v1_chr11_+_70658310_70658476	0.0941952	FOXN1.p2	AK205489|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AB001750|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	D86066|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC129853|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC129854|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AF248489|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AF248490|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1
mm9_v1_chr1_+_173200454_173200531	0.0936979	FOXN1.p2	NM_020579|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	AK155471|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	BC013619|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	BC004095|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	BC021830|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	AF142671|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
mm9_v1_chr7_+_73205419_73205451	0.0936538	FOXN1.p2	AK005256|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK151800|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK153502|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK152546|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK088438|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'
mm9_v1_chr14_-_47896464_47896499	0.0926299	FOXN1.p2	BC063740|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1	AK042443|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1	AK036390|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1
mm9_v1_chr2_-_3430013_3430085	0.0924535	FOXN1.p2	BC002056|Hspa14|50497|heat shock protein 14	AK088996|Hspa14|50497|heat shock protein 14	AK031489|Hspa14|50497|heat shock protein 14	AK031579|Hspa14|50497|heat shock protein 14	AK145937|Hspa14|50497|heat shock protein 14	AK153397|Hspa14|50497|heat shock protein 14	AK150000|Hspa14|50497|heat shock protein 14	NM_015765|Hspa14|50497|heat shock protein 14
mm9_v1_chr4_+_108673212_108673409	0.0922443	FOXN1.p2	AK166470|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1	BC036128|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1	BC026832|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1	AK031548|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1	NM_146150|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1
mm9_v1_chr7_-_71537085_71537174	0.0917459	FOXN1.p2	BC049270|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	BC038033|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	AK013337|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	BC018177|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	AK017490|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	NM_026483|Mphosph10|67973|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
mm9_v1_chr8_-_108375786_108375962	0.0912708	FOXN1.p2	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr15_-_44259348_44259361	0.0901467	FOXN1.p2	
mm9_v1_chr16_-_34096095_34096116	0.0898368	FOXN1.p2	AK088732|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr4_-_155135137_155135233	0.0892955	FOXN1.p2	BC060036|Atad3a|108888|ATPase family, AAA domain containing 3A	BC023301|Atad3a|108888|ATPase family, AAA domain containing 3A	BC047047|Atad3a|108888|ATPase family, AAA domain containing 3A	BC058373|Atad3a|108888|ATPase family, AAA domain containing 3A	AK075921|Atad3a|108888|ATPase family, AAA domain containing 3A	AK165724|Atad3a|108888|ATPase family, AAA domain containing 3A	AK166099|Atad3a|108888|ATPase family, AAA domain containing 3A	AK172038|Atad3a|108888|ATPase family, AAA domain containing 3A	AK150037|Atad3a|108888|ATPase family, AAA domain containing 3A	AK148974|Atad3a|108888|ATPase family, AAA domain containing 3A	AK149702|Atad3a|108888|ATPase family, AAA domain containing 3A	AK172350|Atad3a|108888|ATPase family, AAA domain containing 3A	NM_179203|Atad3a|108888|ATPase family, AAA domain containing 3A
mm9_v1_chr9_-_122860070_122860097	0.0889847	FOXN1.p2	AK220157|1110059G10Rik|66202|RIKEN cDNA 1110059G10 gene	BC034133|1110059G10Rik|66202|RIKEN cDNA 1110059G10 gene	AK083316|1110059G10Rik|66202|RIKEN cDNA 1110059G10 gene
mm9_v1_chr19_+_55390770_55390846	0.0887257	FOXN1.p2	AK135463|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK014541|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK148281|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK030538|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AF035209|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	BC089321|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AF035823|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK028646|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	NM_016862|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	BC012211|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK035895|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
mm9_v1_chr1_+_141351340_141351508	0.0885739	FOXN1.p2	AK052326|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	NM_009791|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK050785|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AF533752|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK083710|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK079744|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK052515|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AY971958|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)
mm9_v1_chr7_+_36182085_36182138	0.0881414	FOXN1.p2	AK012067|Ccdc123|72140|coiled-coil domain containing 123	NM_028120|Ccdc123|72140|coiled-coil domain containing 123	AK082303|Ccdc123|72140|coiled-coil domain containing 123
mm9_v1_chr5_-_109058760_109058761	0.0879604	FOXN1.p2	AK159767|Gak|231580|cyclin G associated kinase
mm9_v1_chr1_-_173177232_173177235	0.0878621	FOXN1.p2	AK168971|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr11_-_69572134_69572140	0.0873898	FOXN1.p2	AK154270|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	AK154389|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	AK155391|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A
mm9_v1_chrX_-_72661900_72661926	0.0868052	FOXN1.p2	AK142198|Mtcp1|17763|mature T-cell proliferation 1	AK140533|Mtcp1|17763|mature T-cell proliferation 1
mm9_v1_chr10_-_39966784_39966854	0.0863523	FOXN1.p2	AK051135|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	NM_001042556|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK020030|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AB041810|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK017678|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK013395|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK011644|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK012641|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK010776|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK012188|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	NM_023323|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)
mm9_v1_chr1_+_44176812_44176851	0.0863206	FOXN1.p2	AK047404|Bivm|246229|basic, immunoglobulin-like variable motif containing	NM_144558|Bivm|246229|basic, immunoglobulin-like variable motif containing	AK032375|Bivm|246229|basic, immunoglobulin-like variable motif containing	AK034329|Bivm|246229|basic, immunoglobulin-like variable motif containing
mm9_v1_chr7_+_52669049_52669064	0.0862367	FOXN1.p2	BC052191|Ntf5|78405|neurotrophin 5	NM_198190|Ntf5|78405|neurotrophin 5
mm9_v1_chr10_-_114821398_114821490	0.0857646	FOXN1.p2	BC027502|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK051198|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK009162|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK018577|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK081303|Thap2|66816|THAP domain containing, apoptosis associated protein 2	NM_025780|Thap2|66816|THAP domain containing, apoptosis associated protein 2
mm9_v1_chr1_-_95532242_95532249	0.085365	FOXN1.p2	AK152917|Stk25|59041|serine/threonine kinase 25 (yeast)
mm9_v1_chr9_-_8134293_8134451	0.0847895	FOXN1.p2	BC119072|AK129341|234915|cDNA sequence AK129341	BC120489|AK129341|234915|cDNA sequence AK129341	NM_001045524|AK129341|234915|cDNA sequence AK129341
mm9_v1_chr17_-_36169573_36169660	0.0847261	FOXN1.p2	AF100699|H2-T23|15040|histocompatibility 2, T region locus 23	AF100700|H2-T23|15040|histocompatibility 2, T region locus 23	AF100702|H2-T23|15040|histocompatibility 2, T region locus 23	AF057279|H2-T23|15040|histocompatibility 2, T region locus 23	AF082510|H2-T23|15040|histocompatibility 2, T region locus 23	BC099472|H2-T23|15040|histocompatibility 2, T region locus 23	AB359230|H2-T23|15040|histocompatibility 2, T region locus 23	AK133502|H2-T23|15040|histocompatibility 2, T region locus 23	M11284|H2-T23|15040|histocompatibility 2, T region locus 23	NM_010398|H2-T23|15040|histocompatibility 2, T region locus 23
mm9_v1_chr12_+_110132481_110132526	0.0847024	FOXN1.p2	NM_177602|Wdr25|212198|WD repeat domain 25	AK147993|Wdr25|212198|WD repeat domain 25
mm9_v1_chr4_+_148859397_148859441	0.0846279	FOXN1.p2	BC023174|Lzic|69151|leucine zipper and CTNNBIP1 domain containing	NM_026963|Lzic|69151|leucine zipper and CTNNBIP1 domain containing
mm9_v1_chrX_-_34650263_34650340	0.0841928	FOXN1.p2	AK019989|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC058761|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK162222|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK011606|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK145431|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	NM_026573|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC117769|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC117770|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm9_v1_chr11_-_102680999_102681013	0.0841401	FOXN1.p2	BC071230|Gjc1|14615|gap junction protein, gamma 1	NM_001159383|Gjc1|14615|gap junction protein, gamma 1	AY390396|Gjc1|14615|gap junction protein, gamma 1
mm9_v1_chr2_-_72817311_72817337	0.0836546	FOXN1.p2	AK088238|Sp3|20687|trans-acting transcription factor 3	NM_001098425|Sp3|20687|trans-acting transcription factor 3
mm9_v1_chr12_+_72075602_72075612	0.0833518	FOXN1.p2	NM_011184|Psma3|19167|proteasome (prosome, macropain) subunit, alpha type 3
mm9_v1_chr9_-_13631432_13631439	0.0833174	FOXN1.p2	AK019414|Cep57|74360|centrosomal protein 57	AK167523|Cep57|74360|centrosomal protein 57
mm9_v1_chr2_-_131005791_131005843	0.083241	FOXN1.p2	BC071269|Cenpb|12616|centromere protein B
mm9_v1_chr1_-_43220804_43220805	0.0829404	FOXN1.p2	AK147024|Fhl2|14200|four and a half LIM domains 2	NM_010212|Fhl2|14200|four and a half LIM domains 2
mm9_v1_chr3_+_145587194_145587422	0.082614	FOXN1.p2	AK171687|Bcl10|12042|B-cell leukemia/lymphoma 10	AK156890|Bcl10|12042|B-cell leukemia/lymphoma 10	AK076082|Bcl10|12042|B-cell leukemia/lymphoma 10	AK172158|Bcl10|12042|B-cell leukemia/lymphoma 10	BC003703|Bcl10|12042|B-cell leukemia/lymphoma 10	AK169126|Bcl10|12042|B-cell leukemia/lymphoma 10	AK146236|Bcl10|12042|B-cell leukemia/lymphoma 10	AK168084|Bcl10|12042|B-cell leukemia/lymphoma 10	AK150883|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152563|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152847|Bcl10|12042|B-cell leukemia/lymphoma 10	AF057701|Bcl10|12042|B-cell leukemia/lymphoma 10	AF100339|Bcl10|12042|B-cell leukemia/lymphoma 10	AF134396|Bcl10|12042|B-cell leukemia/lymphoma 10	NM_009740|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172007|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172009|Bcl10|12042|B-cell leukemia/lymphoma 10	AJ006289|Bcl10|12042|B-cell leukemia/lymphoma 10	BC024379|Bcl10|12042|B-cell leukemia/lymphoma 10	AK140179|Bcl10|12042|B-cell leukemia/lymphoma 10	AF127387|Bcl10|12042|B-cell leukemia/lymphoma 10
mm9_v1_chr17_-_34137221_34137291	0.0825042	FOXN1.p2	AK150790|H2-K1|14972|histocompatibility 2, K1, K region	AK150967|H2-K1|14972|histocompatibility 2, K1, K region	AK159321|H2-K1|14972|histocompatibility 2, K1, K region	AK160102|H2-K1|14972|histocompatibility 2, K1, K region	AK168517|H2-K1|14972|histocompatibility 2, K1, K region	L23494|H2-K1|14972|histocompatibility 2, K1, K region	L23495|H2-K1|14972|histocompatibility 2, K1, K region	BC151193|H2-K1|14972|histocompatibility 2, K1, K region	AK153419|H2-K1|14972|histocompatibility 2, K1, K region	NM_001001892|H2-K1|14972|histocompatibility 2, K1, K region	AF470231|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr7_-_34981664_34981695	0.0817955	FOXN1.p2	BC115797|Pdcd2l|68079|programmed cell death 2-like	AK077948|Pdcd2l|68079|programmed cell death 2-like	NM_026549|Pdcd2l|68079|programmed cell death 2-like	AK151495|Pdcd2l|68079|programmed cell death 2-like	AK003339|Pdcd2l|68079|programmed cell death 2-like	AK154811|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr9_-_9239054_9239155	0.0813799	FOXN1.p2	AK082857|Arhgap42|71544|Rho GTPase activating protein 42
mm9_v1_chr2_-_27331122_27331221	0.0813	FOXN1.p2	AK076472|Brd3|67382|bromodomain containing 3	AK136429|Brd3|67382|bromodomain containing 3	BC004832|Brd3|67382|bromodomain containing 3	AF269193|Brd3|67382|bromodomain containing 3	AK161164|Brd3|67382|bromodomain containing 3	AK167573|Brd3|67382|bromodomain containing 3	AK136007|Brd3|67382|bromodomain containing 3	AK160752|Brd3|67382|bromodomain containing 3	AK081471|Brd3|67382|bromodomain containing 3	AK037435|Brd3|67382|bromodomain containing 3	AK159827|Brd3|67382|bromodomain containing 3	NM_001113573|Brd3|67382|bromodomain containing 3	NM_001113574|Brd3|67382|bromodomain containing 3
mm9_v1_chr12_-_88607158_88607275	0.0812102	FOXN1.p2	BC016646|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK082261|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK049643|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK079055|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK038165|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK046322|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK145043|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142580|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142581|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK020129|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator
mm9_v1_chr12_-_27100112_27100136	0.0808908	FOXN1.p2	AF360998|Rnf144a|108089|ring finger protein 144A	NM_001081977|Rnf144a|108089|ring finger protein 144A	NM_080563|Rnf144a|108089|ring finger protein 144A
mm9_v1_chr14_+_52898820_52898820	0.0806769	FOXN1.p2	NM_023434|Tox4|268741|TOX high mobility group box family member 4
mm9_v1_chr7_-_74367343_74367421	0.0804068	FOXN1.p2	AK038598|1700112J16Rik|76628|RIKEN cDNA 1700112J16 gene
mm9_v1_chr6_-_137118197_137118219	0.0798922	FOXN1.p2	AK028025|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	AK133734|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr3_-_105604199_105604320	0.0797518	FOXN1.p2	AK152504|Rap1a|109905|RAS-related protein-1a	AK030897|Rap1a|109905|RAS-related protein-1a	BC051419|Rap1a|109905|RAS-related protein-1a	NM_145541|Rap1a|109905|RAS-related protein-1a
mm9_v1_chr15_-_79664645_79664773	0.0797062	FOXN1.p2	BC011199|Cbx6|494448|chromobox homolog 6	BC048240|Cbx6|494448|chromobox homolog 6	AK004679|Cbx6|494448|chromobox homolog 6	AK090253|Cbx6|494448|chromobox homolog 6	AK146048|Cbx6|494448|chromobox homolog 6	AK146103|Cbx6|494448|chromobox homolog 6	AY394488|Npcd|504193|neuronal pentraxin chromo domain	AY394489|Npcd|504193|neuronal pentraxin chromo domain	AY395907|Npcd|504193|neuronal pentraxin chromo domain	AK035250|Cbx6|494448|chromobox homolog 6	NM_001013360|Npcd|504193|neuronal pentraxin chromo domain	NM_001013362|Npcd|504193|neuronal pentraxin chromo domain	NM_028763|Cbx6|494448|chromobox homolog 6
mm9_v1_chr5_-_77380593_77380602	0.0791898	FOXN1.p2	AK159141|Ppat|231327|phosphoribosyl pyrophosphate amidotransferase	AK159859|Ppat|231327|phosphoribosyl pyrophosphate amidotransferase	NM_172146|Ppat|231327|phosphoribosyl pyrophosphate amidotransferase
mm9_v1_chr15_-_96472600_96472827	0.0791199	FOXN1.p2	AK040250|Slc38a1|105727|solute carrier family 38, member 1	AK029189|Slc38a1|105727|solute carrier family 38, member 1	BC066815|Slc38a1|105727|solute carrier family 38, member 1	BC030378|Slc38a1|105727|solute carrier family 38, member 1	AK049173|Slc38a1|105727|solute carrier family 38, member 1	AK050914|Slc38a1|105727|solute carrier family 38, member 1	AK082683|Slc38a1|105727|solute carrier family 38, member 1	NM_001166456|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr12_+_29436660_29436756	0.079114	FOXN1.p2	AK150308|Tssc1|380752|tumor suppressing subtransferable candidate 1	AK151830|Tssc1|380752|tumor suppressing subtransferable candidate 1	NM_201357|Tssc1|380752|tumor suppressing subtransferable candidate 1	BC031458|Tssc1|380752|tumor suppressing subtransferable candidate 1
mm9_v1_chr11_+_64248779_64248833	0.0786655	FOXN1.p2	BC094320|Hs3st3a1|15478|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	AK051284|Hs3st3a1|15478|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	NM_178870|Hs3st3a1|15478|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
mm9_v1_chr1_-_75502814_75502969	0.078277	FOXN1.p2	AK029863|Obsl1|98733|obscurin-like 1	AK162473|Obsl1|98733|obscurin-like 1	AK034852|Obsl1|98733|obscurin-like 1
mm9_v1_chr9_+_59465036_59465209	0.0777101	FOXN1.p2	NM_029922|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	BC052064|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	AK076321|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	AK007206|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	AK035349|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	AK021076|Parp6|67287|poly (ADP-ribose) polymerase family, member 6
mm9_v1_chr8_+_48760744_48760757	0.0775519	FOXN1.p2	AK083994|AA386476|546058|expressed sequence AA386476	AK140353|AA386476|546058|expressed sequence AA386476
mm9_v1_chr10_-_79896386_79896387	0.0773703	FOXN1.p2	AK146786|Tcf3|21423|transcription factor 3
mm9_v1_chr17_+_32173346_32173404	0.0771949	FOXN1.p2	
mm9_v1_chr3_+_108087057_108087088	0.0770972	FOXN1.p2	AF175279|Sort1|20661|sortilin 1
mm9_v1_chr7_+_19661548_19661579	0.0769878	FOXN1.p2	NM_010058|Dmwd|13401|dystrophia myotonica-containing WD repeat motif
mm9_v1_chr8_-_107165567_107165632	0.0768869	FOXN1.p2	BC055880|Fam96b|68523|family with sequence similarity 96, member B	AK003830|Fam96b|68523|family with sequence similarity 96, member B	NM_026753|Fam96b|68523|family with sequence similarity 96, member B
mm9_v1_chr7_-_13623158_13623326	0.0760587	FOXN1.p2	BC021792|Ube2m|22192|ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast)	NM_145578|Ube2m|22192|ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast)
mm9_v1_chr15_+_83002779_83002785	0.0760485	FOXN1.p2	AK033475|7530414M10Rik|320374|RIKEN cDNA 7530414M10 gene	AK034072|7530414M10Rik|320374|RIKEN cDNA 7530414M10 gene
mm9_v1_chr13_-_85428605_85428737	0.0757984	FOXN1.p2	BC065082|Rasa1|218397|RAS p21 protein activator 1	AK161497|Rasa1|218397|RAS p21 protein activator 1
mm9_v1_chr4_+_109349259_109349419	0.0752231	FOXN1.p2	AK053752|Faf1|14084|Fas-associated factor 1	U39643|Faf1|14084|Fas-associated factor 1
mm9_v1_chr10_+_85061155_85061265	0.0750801	FOXN1.p2	NM_001017525|Btbd11|74007|BTB (POZ) domain containing 11	AK044022|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr4_-_153534748_153534817	0.0749045	FOXN1.p2	BC019544|Tprgl|67808|transformation related protein 63 regulated like	AK004777|Tprgl|67808|transformation related protein 63 regulated like	AK155413|Tprgl|67808|transformation related protein 63 regulated like	NM_026388|Tprgl|67808|transformation related protein 63 regulated like
mm9_v1_chr9_-_110019806_110019945	0.073837	FOXN1.p2	BC062885|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK153969|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK184646|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK159601|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK146326|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr4_+_155484072_155484109	0.0738043	FOXN1.p2	AK029276|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	BC004010|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_145557|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_177205|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	AK034620|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene
mm9_v1_chr4_+_155079379_155079488	0.0737597	FOXN1.p2	AK019168|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm9_v1_chr5_-_99466008_99466097	0.0730184	FOXN1.p2	BC113205|Prkg2|19092|protein kinase, cGMP-dependent, type II	AK038739|Prkg2|19092|protein kinase, cGMP-dependent, type II	AK081422|Prkg2|19092|protein kinase, cGMP-dependent, type II	NM_008926|Prkg2|19092|protein kinase, cGMP-dependent, type II
mm9_v1_chrX_-_71674499_71674499	0.072733	FOXN1.p2	BC075663|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked	NM_008062|G6pdx|14381|glucose-6-phosphate dehydrogenase X-linked
mm9_v1_chr15_+_44259636_44259698	0.0725985	FOXN1.p2	AK007877|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AF173297|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	BC048361|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	NM_175009|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK032957|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK162511|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK160628|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK016562|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)	AK087816|Eny2|223527|enhancer of yellow 2 homolog (Drosophila)
mm9_v1_chr15_-_50721552_50721725	0.0713212	FOXN1.p2	BC099962|Trps1|83925|trichorhinophalangeal syndrome I (human)	AF346836|Trps1|83925|trichorhinophalangeal syndrome I (human)	NM_032000|Trps1|83925|trichorhinophalangeal syndrome I (human)
mm9_v1_chr3_-_108714578_108714667	0.0712402	FOXN1.p2	BC050900|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC052077|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	NM_025845|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK015938|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK040788|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK159267|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK018126|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr7_-_27951432_27951507	0.0705905	FOXN1.p2	AK166661|Egln2|112406|EGL nine homolog 2 (C. elegans)
mm9_v1_chr16_+_32099870_32099906	0.0702086	FOXN1.p2	AK005324|1500031L02Rik|66994|RIKEN cDNA 1500031L02 gene	NM_025892|1500031L02Rik|66994|RIKEN cDNA 1500031L02 gene	AK007713|1500031L02Rik|66994|RIKEN cDNA 1500031L02 gene
mm9_v1_chr1_-_152240082_152240184	0.0702009	FOXN1.p2	NM_001077237|BC003331|226499|cDNA sequence BC003331	NM_145511|BC003331|226499|cDNA sequence BC003331
mm9_v1_chr8_-_74116341_74116362	0.070036	FOXN1.p2	AK080749|Pgls|66171|6-phosphogluconolactonase
mm9_v1_chr4_+_21775172_21775224	0.0699321	FOXN1.p2	AK162695|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK012036|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK031964|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK017507|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK020035|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK081407|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK083021|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK160288|Sfrs18|66625|serine/arginine-rich splicing factor 18	BC060111|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr10_-_80630518_80630667	0.0698471	FOXN1.p2	AK145367|Pias4|59004|protein inhibitor of activated STAT 4	AF109174|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr11_-_121066021_121066027	0.0697284	FOXN1.p2	AK007883|1110031I02Rik|66179|RIKEN cDNA 1110031I02 gene	AK145938|1110031I02Rik|66179|RIKEN cDNA 1110031I02 gene
mm9_v1_chr2_+_34262387_34262397	0.0696175	FOXN1.p2	BC096618|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr8_-_36889525_36889612	0.0695196	FOXN1.p2	AK009330|Cldn23|71908|claudin 23	AK037108|Cldn23|71908|claudin 23	BC019534|Cldn23|71908|claudin 23	BC085262|Cldn23|71908|claudin 23	AK145246|Cldn23|71908|claudin 23	NM_027998|Cldn23|71908|claudin 23
mm9_v1_chr17_+_78599825_78599875	0.0692641	FOXN1.p2	BC100348|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr10_+_88194103_88194147	0.0692198	FOXN1.p2	AK088330|Arl1|104303|ADP-ribosylation factor-like 1	AK009226|Arl1|104303|ADP-ribosylation factor-like 1	BC116894|Arl1|104303|ADP-ribosylation factor-like 1	BC116896|Arl1|104303|ADP-ribosylation factor-like 1
mm9_v1_chrX_+_34283626_34283705	0.0688395	FOXN1.p2	BC147709|Slc25a43|194744|solute carrier family 25, member 43	BC147717|Slc25a43|194744|solute carrier family 25, member 43	BC172137|Slc25a43|194744|solute carrier family 25, member 43	NM_001085497|Slc25a43|194744|solute carrier family 25, member 43	AK153028|Slc25a43|194744|solute carrier family 25, member 43
mm9_v1_chr8_+_86590718_86590827	0.0686725	FOXN1.p2	AK147790|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	AK036208|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	AK044607|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	NM_009055|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	BC057018|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	AK083571|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	X76088|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)
mm9_v1_chr14_-_58283787_58283830	0.0683653	FOXN1.p2	AK129430|Xpo4|57258|exportin 4	AF145021|Xpo4|57258|exportin 4	NM_020506|Xpo4|57258|exportin 4	AK163558|Xpo4|57258|exportin 4	AK084907|Xpo4|57258|exportin 4
mm9_v1_chr1_+_43502790_43502813	0.0681864	FOXN1.p2	AK014772|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2
mm9_v1_chrX_-_49518099_49518099	0.0679063	FOXN1.p2	BC006622|Gpc4|14735|glypican 4	NM_008150|Gpc4|14735|glypican 4
mm9_v1_chr16_-_52452766_52452798	0.0675284	FOXN1.p2	AY644766|Alcam|11658|activated leukocyte cell adhesion molecule	BC027280|Alcam|11658|activated leukocyte cell adhesion molecule	AB003026|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chr2_+_27370649_27370751	0.0674158	FOXN1.p2	NM_080848|Wdr5|140858|WD repeat domain 5	BC025801|Wdr5|140858|WD repeat domain 5	AK075937|Wdr5|140858|WD repeat domain 5	AK144091|Wdr5|140858|WD repeat domain 5	BC016103|Wdr5|140858|WD repeat domain 5
mm9_v1_chr18_-_60783889_60783905	0.0673554	FOXN1.p2	AK158933|Synpo|104027|synaptopodin	AK171288|Synpo|104027|synaptopodin
mm9_v1_chr2_+_112106470_112106612	0.0673244	FOXN1.p2	BC062099|Slc12a6|107723|solute carrier family 12, member 6	NM_133649|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr3_-_116365414_116365594	0.0671859	FOXN1.p2	AK135865|Hiat1|15247|hippocampus abundant gene transcript 1	BC118047|Hiat1|15247|hippocampus abundant gene transcript 1	D88315|Hiat1|15247|hippocampus abundant gene transcript 1	AK004779|Hiat1|15247|hippocampus abundant gene transcript 1	AK169626|Hiat1|15247|hippocampus abundant gene transcript 1	AK158838|Hiat1|15247|hippocampus abundant gene transcript 1	NM_008246|Hiat1|15247|hippocampus abundant gene transcript 1
mm9_v1_chr1_-_194597214_194597412	0.0671504	FOXN1.p2	AK028230|Hhat|226861|hedgehog acyltransferase	AK134661|Hhat|226861|hedgehog acyltransferase	AK172126|Hhat|226861|hedgehog acyltransferase	BC008159|Hhat|226861|hedgehog acyltransferase	NM_144881|Hhat|226861|hedgehog acyltransferase
mm9_v1_chr5_-_118694869_118695124	0.0671172	FOXN1.p2	AK046850|Rnft2|269695|ring finger protein, transmembrane 2	NM_172998|Rnft2|269695|ring finger protein, transmembrane 2	BC057302|Rnft2|269695|ring finger protein, transmembrane 2	AK148930|Rnft2|269695|ring finger protein, transmembrane 2	NM_001109902|Rnft2|269695|ring finger protein, transmembrane 2	AK090256|Rnft2|269695|ring finger protein, transmembrane 2
mm9_v1_chr7_-_108986589_108986739	0.0670508	FOXN1.p2	AF162781|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_010567|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chrX_+_139115908_139116076	0.0669237	FOXN1.p2	AK166488|Tmem164|209497|transmembrane protein 164	BC056470|Tmem164|209497|transmembrane protein 164	NM_177592|Tmem164|209497|transmembrane protein 164
mm9_v1_chr4_+_122911060_122911106	0.0667072	FOXN1.p2	AK028596|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	AK165078|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	AK004697|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	AK080822|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	BC130263|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	AB093590|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like
mm9_v1_chr9_+_86360760_86360843	0.0664146	FOXN1.p2	NM_177208|Dopey1|320615|dopey family member 1	AK054511|Dopey1|320615|dopey family member 1	AK082462|Dopey1|320615|dopey family member 1	AK044820|Dopey1|320615|dopey family member 1	AK052544|Dopey1|320615|dopey family member 1	AK045873|Dopey1|320615|dopey family member 1
mm9_v1_chr16_+_18066571_18066594	0.0663631	FOXN1.p2	AF021031|Dgcr6|13353|DiGeorge syndrome critical region gene 6
mm9_v1_chr5_+_127722177_127722219	0.0657608	FOXN1.p2	AK028289|Tmem132c|208213|transmembrane protein 132C	AK013435|Tmem132c|208213|transmembrane protein 132C	NM_175432|Tmem132c|208213|transmembrane protein 132C	AK028541|Tmem132c|208213|transmembrane protein 132C	AK157823|Tmem132c|208213|transmembrane protein 132C
mm9_v1_chr1_-_99558252_99558259	0.0656035	FOXN1.p2	AK137265|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed
mm9_v1_chr11_+_115015491_115015512	0.065052	FOXN1.p2	BC050757|Rab37|58222|RAB37, member of RAS oncogene family	NM_021411|Rab37|58222|RAB37, member of RAS oncogene family	AK040216|Rab37|58222|RAB37, member of RAS oncogene family	AK039716|Rab37|58222|RAB37, member of RAS oncogene family	AK050483|Rab37|58222|RAB37, member of RAS oncogene family	BC128020|Rab37|58222|RAB37, member of RAS oncogene family	AB232633|Rab37|58222|RAB37, member of RAS oncogene family	AF233582|Rab37|58222|RAB37, member of RAS oncogene family
mm9_v1_chr2_+_180234680_180234753	0.064889	FOXN1.p2	AB017027|Ntsr1|18216|neurotensin receptor 1	NM_018766|Ntsr1|18216|neurotensin receptor 1	BC087730|Ntsr1|18216|neurotensin receptor 1
mm9_v1_chr11_-_100711785_100712037	0.0648493	FOXN1.p2	Z48539|Stat5b|20851|signal transducer and activator of transcription 5B	BC024319|Stat5b|20851|signal transducer and activator of transcription 5B	AK154664|Stat5b|20851|signal transducer and activator of transcription 5B	AK150098|Stat5b|20851|signal transducer and activator of transcription 5B	NM_001113563|Stat5b|20851|signal transducer and activator of transcription 5B	AK045531|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr5_+_129526383_129526424	0.0647876	FOXN1.p2	L32751|Ran|19384|RAN, member RAS oncogene family	AF159256|Ran|19384|RAN, member RAS oncogene family	M79316|Ran|19384|RAN, member RAS oncogene family	AK217413|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr11_+_59652927_59652959	0.06443	FOXN1.p2	AK035283|Nt5m|103850|5',3'-nucleotidase, mitochondrial
mm9_v1_chr5_-_37187931_37187942	0.064228	FOXN1.p2	AK018675|Mrfap1|67568|Morf4 family associated protein 1	AK020049|Mrfap1|67568|Morf4 family associated protein 1	AK170789|Mrfap1|67568|Morf4 family associated protein 1
mm9_v1_chr13_+_44826638_44826639	0.0638726	FOXN1.p2	AK147226|Jarid2|16468|jumonji, AT rich interactive domain 2
mm9_v1_chr3_+_79395257_79395275	0.0635936	FOXN1.p2	AK142413|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)
mm9_v1_chr13_-_21845695_21845780	0.0631979	FOXN1.p2	NM_178183|Hist1h2ak|319169|histone cluster 1, H2ak	BC119335|Hist1h2ak|319169|histone cluster 1, H2ak
mm9_v1_chr11_+_23565975_23566215	0.0629341	FOXN1.p2	NM_028304|Pus10|74467|pseudouridylate synthase 10	AK145055|Pus10|74467|pseudouridylate synthase 10	BC025555|Pus10|74467|pseudouridylate synthase 10	AK087766|Pus10|74467|pseudouridylate synthase 10	AK012737|Pus10|74467|pseudouridylate synthase 10
mm9_v1_chr19_-_27504303_27504360	0.0627078	FOXN1.p2	AK088081|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	AK141893|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	BC145533|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	NM_177474|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	AK050829|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	BC016186|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
mm9_v1_chr18_-_42110847_42110895	0.0625584	FOXN1.p2	BC119251|Prelid2|77619|PRELI domain containing 2	BC120711|Prelid2|77619|PRELI domain containing 2	BC145035|Prelid2|77619|PRELI domain containing 2	NM_029942|Prelid2|77619|PRELI domain containing 2	AK021193|Prelid2|77619|PRELI domain containing 2
mm9_v1_chr2_+_128926721_128926816	0.0625073	FOXN1.p2	NM_009086|Polr1b|20017|polymerase (RNA) I polypeptide B	AK156712|Polr1b|20017|polymerase (RNA) I polypeptide B	AK144616|Polr1b|20017|polymerase (RNA) I polypeptide B	AK083732|Polr1b|20017|polymerase (RNA) I polypeptide B	AK052672|Polr1b|20017|polymerase (RNA) I polypeptide B	U58280|Polr1b|20017|polymerase (RNA) I polypeptide B	AK143501|Polr1b|20017|polymerase (RNA) I polypeptide B	BC060656|Polr1b|20017|polymerase (RNA) I polypeptide B
mm9_v1_chr12_+_103366928_103366945	0.0624501	FOXN1.p2	AK044368|Slc24a4|238384|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	AK044239|Slc24a4|238384|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm9_v1_chr2_+_105744791_105744850	0.0622641	FOXN1.p2	AK005356|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK011278|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	NM_028260|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK011382|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK078300|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK011466|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK015978|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK011618|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK011872|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK011420|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK135670|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK009570|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK010075|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK012181|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	AK168202|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	BC008259|Immp1l|66541|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
mm9_v1_chrX_-_35809466_35809639	0.0619287	FOXN1.p2	BC138718|Lamp2|16784|lysosomal-associated membrane protein 2	BC138723|Lamp2|16784|lysosomal-associated membrane protein 2	J05287|Lamp2|16784|lysosomal-associated membrane protein 2	AK048174|Lamp2|16784|lysosomal-associated membrane protein 2	AK159272|Lamp2|16784|lysosomal-associated membrane protein 2	AK159731|Lamp2|16784|lysosomal-associated membrane protein 2	AK136550|Lamp2|16784|lysosomal-associated membrane protein 2	AK012149|Lamp2|16784|lysosomal-associated membrane protein 2	AK032974|Lamp2|16784|lysosomal-associated membrane protein 2	AK150766|Lamp2|16784|lysosomal-associated membrane protein 2	AK088804|Lamp2|16784|lysosomal-associated membrane protein 2	AK146731|Lamp2|16784|lysosomal-associated membrane protein 2	AK078193|Lamp2|16784|lysosomal-associated membrane protein 2	NM_001017959|Lamp2|16784|lysosomal-associated membrane protein 2	NM_010685|Lamp2|16784|lysosomal-associated membrane protein 2	AK163933|Lamp2|16784|lysosomal-associated membrane protein 2
mm9_v1_chr7_-_4787775_4787856	0.0607738	FOXN1.p2	AK085127|Shisa7|232813|shisa homolog 7 (Xenopus laevis)	AK145016|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr2_+_155833791_155833870	0.0607453	FOXN1.p2	BC057130|Ergic3|66366|ERGIC and golgi 3	AK050285|Ergic3|66366|ERGIC and golgi 3	BC043720|Ergic3|66366|ERGIC and golgi 3	AK009350|Ergic3|66366|ERGIC and golgi 3	AK013942|Ergic3|66366|ERGIC and golgi 3	NM_025516|Ergic3|66366|ERGIC and golgi 3
mm9_v1_chr8_+_131209614_131209661	0.0602479	FOXN1.p2	AK088016|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	AK135521|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	AK167682|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr14_+_75132097_75132190	0.060239	FOXN1.p2	AK010683|Esd|13885|esterase D/formylglutathione hydrolase	AK007527|Esd|13885|esterase D/formylglutathione hydrolase	AB025408|Esd|13885|esterase D/formylglutathione hydrolase	AK180750|Esd|13885|esterase D/formylglutathione hydrolase	AK079131|Esd|13885|esterase D/formylglutathione hydrolase	NM_016903|Esd|13885|esterase D/formylglutathione hydrolase	AK021209|Esd|13885|esterase D/formylglutathione hydrolase	AK163074|Esd|13885|esterase D/formylglutathione hydrolase	BC046766|Esd|13885|esterase D/formylglutathione hydrolase	BC096644|Esd|13885|esterase D/formylglutathione hydrolase	AK088115|Esd|13885|esterase D/formylglutathione hydrolase
mm9_v1_chr11_+_108286571_108286590	0.0598943	FOXN1.p2	NM_029606|Ccdc46|76380|coiled-coil domain containing 46	AK160317|Ccdc46|76380|coiled-coil domain containing 46
mm9_v1_chr12_+_81216835_81216867	0.0589514	FOXN1.p2	AK040614|1300014J16Rik|74160|RIKEN cDNA 1300014J16 gene	AK005005|1300014J16Rik|74160|RIKEN cDNA 1300014J16 gene
mm9_v1_chr2_+_53051093_53051128	0.0589138	FOXN1.p2	NM_022989|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK035521|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	BC157980|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6
mm9_v1_chr2_-_156688501_156688698	0.0586824	FOXN1.p2	BC042697|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene	AK134962|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene	AK134903|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene	AK012005|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene	AK017271|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene
mm9_v1_chr4_-_10934608_10934850	0.0585178	FOXN1.p2	BC016134|Plekhf2|71801|pleckstrin homology domain containing, family F (with FYVE domain) member 2	BC039276|Plekhf2|71801|pleckstrin homology domain containing, family F (with FYVE domain) member 2	AK154634|Plekhf2|71801|pleckstrin homology domain containing, family F (with FYVE domain) member 2	AK033666|Plekhf2|71801|pleckstrin homology domain containing, family F (with FYVE domain) member 2	NM_175175|Plekhf2|71801|pleckstrin homology domain containing, family F (with FYVE domain) member 2
mm9_v1_chr10_-_128002991_128003052	0.058421	FOXN1.p2	AK166936|Pa2g4|18813|proliferation-associated 2G4	X84789|Pa2g4|18813|proliferation-associated 2G4	AK144645|Pa2g4|18813|proliferation-associated 2G4
mm9_v1_chr16_+_77013880_77014313	0.0582997	FOXN1.p2	AK011798|Usp25|30940|ubiquitin specific peptidase 25	AK036456|Usp25|30940|ubiquitin specific peptidase 25	AF170563|Usp25|30940|ubiquitin specific peptidase 25	BC048171|Usp25|30940|ubiquitin specific peptidase 25	BC063059|Usp25|30940|ubiquitin specific peptidase 25	NM_013918|Usp25|30940|ubiquitin specific peptidase 25
mm9_v1_chr4_+_115500670_115500814	0.0574368	FOXN1.p2	AK084014|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	AK148476|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	NM_175308|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	BC099740|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	BC137587|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	BC137589|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)
mm9_v1_chrX_-_20539095_20539142	0.0568004	FOXN1.p2	AK027917|Uxt|22294|ubiquitously expressed transcript	NM_013840|Uxt|22294|ubiquitously expressed transcript	AK086822|Uxt|22294|ubiquitously expressed transcript	AK163983|Uxt|22294|ubiquitously expressed transcript
mm9_v1_chr17_+_88035996_88036037	0.0563681	FOXN1.p2	AK133510|Epcam|17075|epithelial cell adhesion molecule	BC094465|Epcam|17075|epithelial cell adhesion molecule
mm9_v1_chr8_+_123059756_123059756	0.0558687	FOXN1.p2	AK033263|Gse1|382034|genetic suppressor element 1	NM_001145897|Gse1|382034|genetic suppressor element 1
mm9_v1_chr1_-_173080710_173080755	0.0555196	FOXN1.p2	BC083091|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	BC005779|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK002459|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK135503|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK012818|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK032458|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	NM_025321|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein
mm9_v1_chr11_+_62364951_62365050	0.0554251	FOXN1.p2	AK007273|Ubb|22187|ubiquitin B	AK003190|Ubb|22187|ubiquitin B	AK010413|Ubb|22187|ubiquitin B	AK010625|Ubb|22187|ubiquitin B	AK012443|Ubb|22187|ubiquitin B	AK013027|Ubb|22187|ubiquitin B	AK132747|Ubb|22187|ubiquitin B	AK165313|Ubb|22187|ubiquitin B	NM_011664|Ubb|22187|ubiquitin B	X51703|Ubb|22187|ubiquitin B	AK160683|Ubb|22187|ubiquitin B	AK013873|Ubb|22187|ubiquitin B	BC019850|Ubb|22187|ubiquitin B	BC100341|Ubb|22187|ubiquitin B
mm9_v1_chr9_-_108481069_108481081	0.0550598	FOXN1.p2	AB041854|Wdr6|83669|WD repeat domain 6
mm9_v1_chr7_+_104480819_104480860	0.0547203	FOXN1.p2	NM_001039039|Kctd21|622320|potassium channel tetramerisation domain containing 21	AK141547|Kctd21|622320|potassium channel tetramerisation domain containing 21
mm9_v1_chr11_-_3352243_3352377	0.0546288	FOXN1.p2	AK167455|Rnf185|193670|ring finger protein 185	AK077638|Rnf185|193670|ring finger protein 185	BC014812|Rnf185|193670|ring finger protein 185	AK149640|Rnf185|193670|ring finger protein 185	AK168904|Rnf185|193670|ring finger protein 185	AK053358|Rnf185|193670|ring finger protein 185	AK034108|Rnf185|193670|ring finger protein 185	NM_145355|Rnf185|193670|ring finger protein 185	AK052436|Rnf185|193670|ring finger protein 185
mm9_v1_chr9_+_110235785_110235800	0.0543401	FOXN1.p2	NM_001001144|Scap|235623|SREBF chaperone	NM_001103162|Scap|235623|SREBF chaperone
mm9_v1_chr12_-_58646914_58647013	0.0543316	FOXN1.p2	X74936|Foxa1|15375|forkhead box A1	U44752|Foxa1|15375|forkhead box A1
mm9_v1_chr12_-_111840150_111840172	0.0542626	FOXN1.p2	
mm9_v1_chr11_+_77796714_77796777	0.0537035	FOXN1.p2	BC043080|Phf12|268448|PHD finger protein 12
mm9_v1_chr6_-_137118238_137118241	0.0532384	FOXN1.p2	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr15_+_87455659_87455659	0.0530205	FOXN1.p2	AY325124|Fam19a5|106014|family with sequence similarity 19, member A5	BC015306|Fam19a5|106014|family with sequence similarity 19, member A5	NM_134096|Fam19a5|106014|family with sequence similarity 19, member A5
mm9_v1_chr4_+_124743933_124743973	0.0526251	FOXN1.p2	AK010794|Snip1|76793|Smad nuclear interacting protein 1	AK040571|Snip1|76793|Smad nuclear interacting protein 1	AK049254|Snip1|76793|Smad nuclear interacting protein 1	AK049318|Snip1|76793|Smad nuclear interacting protein 1	AK143801|Snip1|76793|Smad nuclear interacting protein 1	NM_175246|Snip1|76793|Smad nuclear interacting protein 1	AK078163|Snip1|76793|Smad nuclear interacting protein 1	AK132768|Snip1|76793|Smad nuclear interacting protein 1	BC064067|Snip1|76793|Smad nuclear interacting protein 1
mm9_v1_chr19_+_46576203_46576224	0.0526199	FOXN1.p2	BC029283|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr17_-_24346280_24346475	0.0526009	FOXN1.p2	BC094362|Ntn3|18209|netrin 3	NM_010947|Ntn3|18209|netrin 3	AK083904|Ntn3|18209|netrin 3	BC053038|Ntn3|18209|netrin 3	AK031199|Ntn3|18209|netrin 3
mm9_v1_chr3_+_102799653_102799657	0.0517495	FOXN1.p2	AK014247|Sike1|66641|suppressor of IKBKE 1
mm9_v1_chr4_+_155079153_155079290	0.0514516	FOXN1.p2	AK148131|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	AK004446|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	AK005220|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	BC016544|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm9_v1_chr4_+_115457560_115457648	0.051351	FOXN1.p2	BC044874|Atpaf1|230649|ATP synthase mitochondrial F1 complex assembly factor 1	NM_181040|Atpaf1|230649|ATP synthase mitochondrial F1 complex assembly factor 1
mm9_v1_chr2_+_32143868_32143875	0.0505793	FOXN1.p2	BC011407|Golga2|99412|golgi autoantigen, golgin subfamily a, 2
mm9_v1_chr17_-_24346171_24346241	0.0505504	FOXN1.p2	AF128866|Ntn3|18209|netrin 3	AK141856|Ntn3|18209|netrin 3
mm9_v1_chr17_+_15511962_15511979	0.0505006	FOXN1.p2	AK044580|A930024N18Rik|328748|RIKEN cDNA A930024N18 gene
mm9_v1_chr6_-_85911593_85911675	0.0502412	FOXN1.p2	BC067028|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK040232|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK079991|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK081629|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK088941|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_028099|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
mm9_v1_chr6_+_113433408_113433466	0.0500235	FOXN1.p2	AK042344|Creld1|171508|cysteine-rich with EGF-like domains 1	AK077726|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chr7_-_134417572_134417575	0.0495664	FOXN1.p2	AK077573|Sephs2|20768|selenophosphate synthetase 2	AK168722|Sephs2|20768|selenophosphate synthetase 2	AK168965|Sephs2|20768|selenophosphate synthetase 2	NM_009266|Sephs2|20768|selenophosphate synthetase 2
mm9_v1_chr10_-_29081811_29081881	0.0491578	FOXN1.p2	AK012080|Rnf146|68031|ring finger protein 146	AK169237|Rnf146|68031|ring finger protein 146
mm9_v1_chr8_+_87583954_87584056	0.0489469	FOXN1.p2	AK156709|Fbxw9|68628|F-box and WD-40 domain protein 9	NM_026791|Fbxw9|68628|F-box and WD-40 domain protein 9	BC043658|Fbxw9|68628|F-box and WD-40 domain protein 9
mm9_v1_chr13_+_31717603_31717684	0.0487194	FOXN1.p2	AK132385|Foxf2|14238|forkhead box F2	NM_010225|Foxf2|14238|forkhead box F2
mm9_v1_chr11_-_53520800_53520809	0.0486456	FOXN1.p2	AK144155|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr9_+_81525964_81526022	0.0486117	FOXN1.p2	AK162636|D430036J16Rik|319405|RIKEN cDNA D430036J16 gene
mm9_v1_chr4_-_62186055_62186086	0.0478265	FOXN1.p2	BC034004|Pole3|59001|polymerase (DNA directed), epsilon 3 (p17 subunit)
mm9_v1_chr13_+_38437584_38437664	0.0477065	FOXN1.p2	NM_007556|Bmp6|12161|bone morphogenetic protein 6	X80992|Bmp6|12161|bone morphogenetic protein 6	BC138593|Bmp6|12161|bone morphogenetic protein 6	BC138595|Bmp6|12161|bone morphogenetic protein 6
mm9_v1_chr9_+_13632152_13632249	0.0476379	FOXN1.p2	AK145026|Fam76b|72826|family with sequence similarity 76, member B	BC043120|Fam76b|72826|family with sequence similarity 76, member B	NM_176836|Fam76b|72826|family with sequence similarity 76, member B	AK052430|Fam76b|72826|family with sequence similarity 76, member B	BC050870|Fam76b|72826|family with sequence similarity 76, member B
mm9_v1_chr13_-_95992994_95993009	0.0471464	FOXN1.p2	AK043680|Pde8b|218461|phosphodiesterase 8B	AK045991|Pde8b|218461|phosphodiesterase 8B	NM_001170669|Pde8b|218461|phosphodiesterase 8B
mm9_v1_chr19_+_10969876_10969936	0.0469972	FOXN1.p2	AK047693|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	AB222602|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)
mm9_v1_chr17_+_35479186_35479277	0.0464213	FOXN1.p2	BC138688|H2-Q2|15013|histocompatibility 2, Q region locus 2	BC138689|H2-Q2|15013|histocompatibility 2, Q region locus 2	AY989880|H2-Q2|15013|histocompatibility 2, Q region locus 2	NM_010392|H2-Q2|15013|histocompatibility 2, Q region locus 2
mm9_v1_chr1_+_152240389_152240449	0.0463323	FOXN1.p2	AK132381|Tpr|108989|translocated promoter region	AK088078|Tpr|108989|translocated promoter region	AK157716|Tpr|108989|translocated promoter region
mm9_v1_chr17_-_84031234_84031246	0.0462443	FOXN1.p2	AF454551|Kcng3|225030|potassium voltage-gated channel, subfamily G, member 3	AF454552|Kcng3|225030|potassium voltage-gated channel, subfamily G, member 3	NM_153512|Kcng3|225030|potassium voltage-gated channel, subfamily G, member 3
mm9_v1_chr17_+_44914115_44914127	0.0461893	FOXN1.p2	AK075916|Supt3h|109115|suppressor of Ty 3 homolog (S. cerevisiae)	NM_178652|Supt3h|109115|suppressor of Ty 3 homolog (S. cerevisiae)
mm9_v1_chr4_+_144482979_144483095	0.0461463	FOXN1.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr12_-_81744771_81744855	0.0457714	FOXN1.p2	BC107315|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC107316|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC132421|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC132423|Erh|13877|enhancer of rudimentary homolog (Drosophila)	U66870|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC099476|Erh|13877|enhancer of rudimentary homolog (Drosophila)	U01140|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC083141|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK171834|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK010451|Erh|13877|enhancer of rudimentary homolog (Drosophila)	D73368|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK168188|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK080617|Erh|13877|enhancer of rudimentary homolog (Drosophila)	NM_007951|Erh|13877|enhancer of rudimentary homolog (Drosophila)
mm9_v1_chr15_-_75509153_75509239	0.0457354	FOXN1.p2	BC138582|Top1mt|72960|DNA topoisomerase 1, mitochondrial	BC138583|Top1mt|72960|DNA topoisomerase 1, mitochondrial	BC145336|Top1mt|72960|DNA topoisomerase 1, mitochondrial	AF362952|Top1mt|72960|DNA topoisomerase 1, mitochondrial	NM_028404|Top1mt|72960|DNA topoisomerase 1, mitochondrial	AK147119|Top1mt|72960|DNA topoisomerase 1, mitochondrial
mm9_v1_chr8_+_63369202_63369282	0.0450936	FOXN1.p2	AK151754|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	BC042740|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	NM_028299|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	AK150453|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	AK157260|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	AK012304|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene
mm9_v1_chr15_+_74346835_74346839	0.0437135	FOXN1.p2	AK147494|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr9_-_99336923_99337150	0.0434158	FOXN1.p2	AK050469|Mras|17532|muscle and microspikes RAS	AB004879|Mras|17532|muscle and microspikes RAS	NM_008624|Mras|17532|muscle and microspikes RAS
mm9_v1_chr2_-_42508486_42508592	0.0432909	FOXN1.p2	BC064765|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	AK080989|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	AK039425|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)
mm9_v1_chr7_-_112959469_112959543	0.0432585	FOXN1.p2	AK012906|Mrpl17|27397|mitochondrial ribosomal protein L17	AK088838|Mrpl17|27397|mitochondrial ribosomal protein L17	BC010718|Mrpl17|27397|mitochondrial ribosomal protein L17	AK147957|Mrpl17|27397|mitochondrial ribosomal protein L17	AK144092|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr10_-_62255007_62255115	0.0430642	FOXN1.p2	BC034174|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC051052|Ccar1|67500|cell division cycle and apoptosis regulator 1	NM_026201|Ccar1|67500|cell division cycle and apoptosis regulator 1
mm9_v1_chr12_-_99972803_99972854	0.0430181	FOXN1.p2	D37801|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK013777|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK030456|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	NM_011877|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21
mm9_v1_chr1_-_173177243_173177273	0.0430142	FOXN1.p2	AK146269|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr1_-_173211042_173211071	0.0430114	FOXN1.p2	D45185|Ppox|19044|protoporphyrinogen oxidase
mm9_v1_chr10_-_33927262_33927356	0.042961	FOXN1.p2	AK045065|Dse|212898|dermatan sulfate epimerase	BC053095|Dse|212898|dermatan sulfate epimerase	NM_172508|Dse|212898|dermatan sulfate epimerase
mm9_v1_chr11_-_69615126_69615217	0.0429408	FOXN1.p2	NM_010198|Fgf11|14166|fibroblast growth factor 11	U66203|Fgf11|14166|fibroblast growth factor 11	BC066859|Fgf11|14166|fibroblast growth factor 11
mm9_v1_chr19_+_37000568_37000661	0.0425656	FOXN1.p2	NM_001080706|Btaf1|107182|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm9_v1_chr4_+_62069801_62069844	0.042512	FOXN1.p2	NM_027297|Prpf4|70052|PRP4 pre-mRNA processing factor 4 homolog (yeast)	AK166912|Prpf4|70052|PRP4 pre-mRNA processing factor 4 homolog (yeast)	AK005464|Prpf4|70052|PRP4 pre-mRNA processing factor 4 homolog (yeast)	AK167216|Prpf4|70052|PRP4 pre-mRNA processing factor 4 homolog (yeast)	AK090114|Prpf4|70052|PRP4 pre-mRNA processing factor 4 homolog (yeast)
mm9_v1_chr7_-_26601526_26601576	0.042326	FOXN1.p2	AK087069|Cyp2s1|74134|cytochrome P450, family 2, subfamily s, polypeptide 1	AK004699|Cyp2s1|74134|cytochrome P450, family 2, subfamily s, polypeptide 1	NM_028775|Cyp2s1|74134|cytochrome P450, family 2, subfamily s, polypeptide 1	BC064733|Cyp2s1|74134|cytochrome P450, family 2, subfamily s, polypeptide 1	AK054324|Cyp2s1|74134|cytochrome P450, family 2, subfamily s, polypeptide 1
mm9_v1_chr11_+_49944855_49944942	0.0412675	FOXN1.p2	NM_029745|Tbc1d9b|76795|TBC1 domain family, member 9B	BC062928|Tbc1d9b|76795|TBC1 domain family, member 9B	AK166472|Tbc1d9b|76795|TBC1 domain family, member 9B	BC065080|Tbc1d9b|76795|TBC1 domain family, member 9B	AK035457|Tbc1d9b|76795|TBC1 domain family, member 9B	AK147964|Tbc1d9b|76795|TBC1 domain family, member 9B	AK049999|Tbc1d9b|76795|TBC1 domain family, member 9B	BC065130|Tbc1d9b|76795|TBC1 domain family, member 9B	AK172999|Tbc1d9b|76795|TBC1 domain family, member 9B
mm9_v1_chr12_+_45429857_45429887	0.0411616	FOXN1.p2	AK043838|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_001146031|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_176930|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr10_-_79896330_79896385	0.0407642	FOXN1.p2	BC006860|Tcf3|21423|transcription factor 3	AK017617|Tcf3|21423|transcription factor 3	AK156265|Tcf3|21423|transcription factor 3	AK034777|Tcf3|21423|transcription factor 3	AK161009|Tcf3|21423|transcription factor 3	AK038738|Tcf3|21423|transcription factor 3
mm9_v1_chr6_+_137683599_137683666	0.040298	FOXN1.p2	AK147179|Strap|20901|serine/threonine kinase receptor associated protein	NM_011499|Strap|20901|serine/threonine kinase receptor associated protein	AK154158|Strap|20901|serine/threonine kinase receptor associated protein	AK075804|Strap|20901|serine/threonine kinase receptor associated protein	AF096285|Strap|20901|serine/threonine kinase receptor associated protein	AK077504|Strap|20901|serine/threonine kinase receptor associated protein	AK145971|Strap|20901|serine/threonine kinase receptor associated protein	BC141076|Strap|20901|serine/threonine kinase receptor associated protein	BC145342|Strap|20901|serine/threonine kinase receptor associated protein
mm9_v1_chr15_-_34608600_34608626	0.0402388	FOXN1.p2	AK038556|Nipal2|223473|NIPA-like domain containing 2	BC058207|Nipal2|223473|NIPA-like domain containing 2
mm9_v1_chr15_+_102300902_102300971	0.0399526	FOXN1.p2	AK169268|Pcbp2|18521|poly(rC) binding protein 2
mm9_v1_chr17_-_87846158_87846274	0.0395283	FOXN1.p2	BC021347|Calm2|12314|calmodulin 2	BC051444|Calm2|12314|calmodulin 2	BC100301|Calm2|12314|calmodulin 2	AK013068|Calm2|12314|calmodulin 2	AK012247|Calm2|12314|calmodulin 2	AK168741|Calm2|12314|calmodulin 2	AK005089|Calm2|12314|calmodulin 2	AK012564|Calm2|12314|calmodulin 2	AK161268|Calm2|12314|calmodulin 2	AK161984|Calm2|12314|calmodulin 2	AK152303|Calm2|12314|calmodulin 2	L31642|Calm2|12314|calmodulin 2	AK160636|Calm2|12314|calmodulin 2	NM_007589|Calm2|12314|calmodulin 2
mm9_v1_chr10_-_79896388_79896431	0.0394879	FOXN1.p2	AK170674|Tcf3|21423|transcription factor 3	NM_001164147|Tcf3|21423|transcription factor 3	NM_001164148|Tcf3|21423|transcription factor 3	NM_001164149|Tcf3|21423|transcription factor 3	NM_001164150|Tcf3|21423|transcription factor 3	NM_001164151|Tcf3|21423|transcription factor 3	NM_001164152|Tcf3|21423|transcription factor 3	NM_001164153|Tcf3|21423|transcription factor 3	NM_011548|Tcf3|21423|transcription factor 3	AK147735|Tcf3|21423|transcription factor 3
mm9_v1_chr2_+_32143769_32143812	0.039154	FOXN1.p2	AK077516|Golga2|99412|golgi autoantigen, golgin subfamily a, 2	NM_001080968|Golga2|99412|golgi autoantigen, golgin subfamily a, 2	NM_133852|Golga2|99412|golgi autoantigen, golgin subfamily a, 2
mm9_v1_chr7_+_107520787_107520818	0.0390928	FOXN1.p2	AK165331|C2cd3|277939|C2 calcium-dependent domain containing 3	AK162155|C2cd3|277939|C2 calcium-dependent domain containing 3
mm9_v1_chr10_+_82323085_82323203	0.0388466	FOXN1.p2	NM_001042514|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr17_+_29628249_29628310	0.038835	FOXN1.p2	AK154669|Pim1|18712|proviral integration site 1
mm9_v1_chr2_+_34262372_34262384	0.0382261	FOXN1.p2	AK042154|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	AK148428|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr4_-_116380924_116380989	0.0379439	FOXN1.p2	AK007725|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria	AK012761|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria	BC054756|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria	AK084194|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria	NM_025962|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria
mm9_v1_chr10_+_7499982_7500066	0.0377651	FOXN1.p2	
mm9_v1_chr8_+_26895748_26895788	0.0376554	FOXN1.p2	BC021460|Lsm1|67207|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr3_+_51219971_51220063	0.037493	FOXN1.p2	AF510858|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	BC050017|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm9_v1_chr1_-_173177212_173177226	0.0374729	FOXN1.p2	AK151746|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	AK153364|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	BC003898|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr17_+_47027617_47027637	0.0373068	FOXN1.p2	AK132036|Tbcc|72726|tubulin-specific chaperone C	AK012950|Tbcc|72726|tubulin-specific chaperone C	BC019476|Tbcc|72726|tubulin-specific chaperone C	BC083164|Tbcc|72726|tubulin-specific chaperone C
mm9_v1_chrX_-_92640149_92640178	0.0367906	FOXN1.p2	BC053442|Fam123b|72345|family with sequence similarity 123, member B	AK012651|Fam123b|72345|family with sequence similarity 123, member B	AK049774|Fam123b|72345|family with sequence similarity 123, member B	NM_175179|Fam123b|72345|family with sequence similarity 123, member B
mm9_v1_chr1_+_162836541_162836569	0.0366537	FOXN1.p2	NM_001024952|Rc3h1|381305|RING CCCH (C3H) domains 1	AK139648|Rc3h1|381305|RING CCCH (C3H) domains 1
mm9_v1_chr16_-_65105465_65105679	0.036562	FOXN1.p2	BC120507|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	BC137604|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	NM_008310|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	Z14224|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	AK045364|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F
mm9_v1_chr11_-_44283916_44284049	0.0362983	FOXN1.p2	AK015910|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK172546|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK043952|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK050031|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK153998|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK147744|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	NM_024475|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1
mm9_v1_chr19_+_36484237_36484340	0.0362742	FOXN1.p2	AK146133|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chr19_-_40686672_40686686	0.0351602	FOXN1.p2	BC080805|Tctn3|67590|tectonic family member 3
mm9_v1_chr4_+_130225132_130225155	0.0342583	FOXN1.p2	AK154059|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr5_+_137735875_137735896	0.0341231	FOXN1.p2	BC087958|Ufsp1|70240|UFM1-specific peptidase 1	BC016577|Ufsp1|70240|UFM1-specific peptidase 1	AK012343|Ufsp1|70240|UFM1-specific peptidase 1	NM_027356|Ufsp1|70240|UFM1-specific peptidase 1
mm9_v1_chr15_+_74346853_74346867	0.0341068	FOXN1.p2	AK147600|Bai1|107831|brain-specific angiogenesis inhibitor 1
mm9_v1_chr6_+_66986592_66986609	0.0340242	FOXN1.p2	AK029473|E230016M11Rik|320172|RIKEN cDNA E230016M11 gene
mm9_v1_chr8_-_36028698_36028768	0.0338969	FOXN1.p2	BC057370|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	AK080913|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	NM_175091|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm9_v1_chr1_+_75165201_75165358	0.0336138	FOXN1.p2	NM_001159905|Zfand2b|68818|zinc finger, AN1 type domain 2B	NM_001159906|Zfand2b|68818|zinc finger, AN1 type domain 2B	BC011495|Zfand2b|68818|zinc finger, AN1 type domain 2B	AK151430|Zfand2b|68818|zinc finger, AN1 type domain 2B	NM_026846|Zfand2b|68818|zinc finger, AN1 type domain 2B	AK004332|Zfand2b|68818|zinc finger, AN1 type domain 2B
mm9_v1_chr7_+_94395160_94395355	0.0333917	FOXN1.p2	AK169304|Nox4|50490|NADPH oxidase 4	AK087097|Nox4|50490|NADPH oxidase 4	AF261944|Nox4|50490|NADPH oxidase 4	AF276957|Nox4|50490|NADPH oxidase 4	AK050371|Nox4|50490|NADPH oxidase 4	AK085509|Nox4|50490|NADPH oxidase 4	AK149398|Nox4|50490|NADPH oxidase 4	AK149455|Nox4|50490|NADPH oxidase 4	AK149492|Nox4|50490|NADPH oxidase 4	NM_015760|Nox4|50490|NADPH oxidase 4	AK052905|Nox4|50490|NADPH oxidase 4	AB041034|Nox4|50490|NADPH oxidase 4	AB042745|Nox4|50490|NADPH oxidase 4	AF218723|Nox4|50490|NADPH oxidase 4	BC138918|Nox4|50490|NADPH oxidase 4	BC145462|Nox4|50490|NADPH oxidase 4	BC021378|Nox4|50490|NADPH oxidase 4	EU861989|Nox4|50490|NADPH oxidase 4
mm9_v1_chr5_+_12383165_12383165	0.0333417	FOXN1.p2	AK052671|Sema3d|108151|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	NM_028882|Sema3d|108151|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
mm9_v1_chr10_-_127103595_127103798	0.0331782	FOXN1.p2	AK171180|Nab2|17937|Ngfi-A binding protein 2	BC045139|Nab2|17937|Ngfi-A binding protein 2	AK155501|Nab2|17937|Ngfi-A binding protein 2	AK158688|Nab2|17937|Ngfi-A binding protein 2	U47543|Nab2|17937|Ngfi-A binding protein 2	NM_001122895|Nab2|17937|Ngfi-A binding protein 2	NM_008668|Nab2|17937|Ngfi-A binding protein 2
mm9_v1_chr13_+_14046883_14047111	0.0330364	FOXN1.p2	AK044785|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK151677|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK153362|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK035259|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK084275|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK085691|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK134868|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK167635|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	NM_178640|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	BC085110|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK041022|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AB116655|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK144880|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
mm9_v1_chr8_+_89147925_89148062	0.0329885	FOXN1.p2	AK088348|Lonp2|66887|lon peptidase 2, peroxisomal	NM_025827|Lonp2|66887|lon peptidase 2, peroxisomal	AK168628|Lonp2|66887|lon peptidase 2, peroxisomal	AK151103|Lonp2|66887|lon peptidase 2, peroxisomal	AK168791|Lonp2|66887|lon peptidase 2, peroxisomal	AK168956|Lonp2|66887|lon peptidase 2, peroxisomal	AK151406|Lonp2|66887|lon peptidase 2, peroxisomal	AK152964|Lonp2|66887|lon peptidase 2, peroxisomal	BC049090|Lonp2|66887|lon peptidase 2, peroxisomal	AK004843|Lonp2|66887|lon peptidase 2, peroxisomal	AK169656|Lonp2|66887|lon peptidase 2, peroxisomal	AK050231|Lonp2|66887|lon peptidase 2, peroxisomal
mm9_v1_chr1_-_99557957_99557974	0.0329728	FOXN1.p2	BC034088|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed
mm9_v1_chr11_+_120534337_120534436	0.0327489	FOXN1.p2	BC022115|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	BC019177|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	BC031153|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	AY349133|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	AK088197|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm9_v1_chr2_-_33743465_33743465	0.0325082	FOXN1.p2	BC059907|Fam125b|72543|family with sequence similarity 125, member B	NM_175184|Fam125b|72543|family with sequence similarity 125, member B
mm9_v1_chr10_+_127472725_127472748	0.0318331	FOXN1.p2	U22151|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC099375|Naca|17938|nascent polypeptide-associated complex alpha polypeptide
mm9_v1_chr6_+_113392563_113392636	0.0315018	FOXN1.p2	AK141417|Jagn1|67767|jagunal homolog 1 (Drosophila)	AK043698|Jagn1|67767|jagunal homolog 1 (Drosophila)	AK151252|Jagn1|67767|jagunal homolog 1 (Drosophila)	AK170345|Jagn1|67767|jagunal homolog 1 (Drosophila)	BC011296|Jagn1|67767|jagunal homolog 1 (Drosophila)	AK020149|Jagn1|67767|jagunal homolog 1 (Drosophila)	BC025910|Jagn1|67767|jagunal homolog 1 (Drosophila)	AK034671|Jagn1|67767|jagunal homolog 1 (Drosophila)	BC037019|Jagn1|67767|jagunal homolog 1 (Drosophila)	AK017953|Jagn1|67767|jagunal homolog 1 (Drosophila)	NM_026365|Jagn1|67767|jagunal homolog 1 (Drosophila)	AK003673|Jagn1|67767|jagunal homolog 1 (Drosophila)
mm9_v1_chr5_+_130731488_130731494	0.030957	FOXN1.p2	AK045279|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	NM_178897|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
mm9_v1_chr2_-_37278415_37278506	0.0308128	FOXN1.p2	BC117951|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	BC117952|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	AK053071|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	NM_001100591|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2
mm9_v1_chr7_+_30906952_30907031	0.0303113	FOXN1.p2	NM_001081007|Zfp382|233060|zinc finger protein 382	AK134263|Zfp382|233060|zinc finger protein 382	BC151163|Zfp382|233060|zinc finger protein 382
mm9_v1_chr17_+_87362450_87362450	0.0291317	FOXN1.p2	BC056363|Rhoq|104215|ras homolog gene family, member Q	NM_145491|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chr13_-_91947224_91947313	0.0285892	FOXN1.p2	BC024496|Zcchc9|69085|zinc finger, CCHC domain containing 9	AK007541|Zcchc9|69085|zinc finger, CCHC domain containing 9	AK044802|Zcchc9|69085|zinc finger, CCHC domain containing 9	NM_145453|Zcchc9|69085|zinc finger, CCHC domain containing 9	AK051610|Zcchc9|69085|zinc finger, CCHC domain containing 9
mm9_v1_chr2_+_120229988_120230073	0.0272422	FOXN1.p2	BC058197|Ganc|76051|glucosidase, alpha; neutral C
mm9_v1_chr9_-_79566528_79566565	0.0269686	FOXN1.p2	AK028536|Col12a1|12816|collagen, type XII, alpha 1
mm9_v1_chr5_-_20561610_20561764	0.0268584	FOXN1.p2	X63440|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	BC051980|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	NM_011203|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	AK154107|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12
mm9_v1_chr4_+_114079291_114079328	0.0263383	FOXN1.p2	NM_001085549|Gm12824|666048|predicted gene 12824
mm9_v1_chr9_+_78296020_78296030	0.026136	FOXN1.p2	AF369902|Mto1|68291|mitochondrial translation optimization 1 homolog (S. cerevisiae)	BC063256|Mto1|68291|mitochondrial translation optimization 1 homolog (S. cerevisiae)
mm9_v1_chr2_+_124435841_124435850	0.0261149	FOXN1.p2	AK052232|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr5_-_46247789_46247790	0.0261114	FOXN1.p2	AB076078|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK042567|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	NM_172153|Lcorl|209707|ligand dependent nuclear receptor corepressor-like
mm9_v1_chr12_-_11157178_11157178	0.0261026	FOXN1.p2	AK046054|Kcns3|238076|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	NM_173417|Kcns3|238076|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
mm9_v1_chr15_-_99705812_99705887	0.0259374	FOXN1.p2	BC031490|Lima1|65970|LIM domain and actin binding 1	AK028311|Lima1|65970|LIM domain and actin binding 1	AK049350|Lima1|65970|LIM domain and actin binding 1	AF307845|Lima1|65970|LIM domain and actin binding 1	AK078959|Lima1|65970|LIM domain and actin binding 1	NM_001113545|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr6_+_88852457_88852516	0.0259104	FOXN1.p2	AK164913|Tpra1|24100|transmembrane protein, adipocyte asscociated 1
mm9_v1_chr3_+_37538808_37538883	0.025723	FOXN1.p2	BC053428|Spry1|24063|sprouty homolog 1 (Drosophila)	NM_011896|Spry1|24063|sprouty homolog 1 (Drosophila)	AK014578|Spry1|24063|sprouty homolog 1 (Drosophila)	AK140405|Spry1|24063|sprouty homolog 1 (Drosophila)	BC039139|Spry1|24063|sprouty homolog 1 (Drosophila)
mm9_v1_chr7_-_138506189_138506246	0.0256519	FOXN1.p2	BC052432|2310057M21Rik|68277|RIKEN cDNA 2310057M21 gene	AK019097|2310057M21Rik|68277|RIKEN cDNA 2310057M21 gene	NM_026655|2310057M21Rik|68277|RIKEN cDNA 2310057M21 gene	AK148008|2310057M21Rik|68277|RIKEN cDNA 2310057M21 gene	BC044749|2310057M21Rik|68277|RIKEN cDNA 2310057M21 gene	AK088850|2310057M21Rik|68277|RIKEN cDNA 2310057M21 gene
mm9_v1_chr19_+_53603807_53603807	0.0254978	FOXN1.p2	NM_001085390|Dusp5|240672|dual specificity phosphatase 5
mm9_v1_chr17_-_24844481_24844605	0.0253877	FOXN1.p2	AK193903|Tbl3|213773|transducin (beta)-like 3	AK210914|Tbl3|213773|transducin (beta)-like 3	AK210933|Tbl3|213773|transducin (beta)-like 3	BC019504|Tbl3|213773|transducin (beta)-like 3	AK137554|Tbl3|213773|transducin (beta)-like 3	AK028806|Tbl3|213773|transducin (beta)-like 3	AK163228|Tbl3|213773|transducin (beta)-like 3	AK165125|Tbl3|213773|transducin (beta)-like 3	AK167127|Tbl3|213773|transducin (beta)-like 3	AK081572|Tbl3|213773|transducin (beta)-like 3	AK149940|Tbl3|213773|transducin (beta)-like 3	AK083399|Tbl3|213773|transducin (beta)-like 3	AK081966|Tbl3|213773|transducin (beta)-like 3	NM_145396|Tbl3|213773|transducin (beta)-like 3
mm9_v1_chr12_-_110132316_110132383	0.0252536	FOXN1.p2	BC046232|Wars|22375|tryptophanyl-tRNA synthetase	AK183530|Wars|22375|tryptophanyl-tRNA synthetase	AK150090|Wars|22375|tryptophanyl-tRNA synthetase	AK150267|Wars|22375|tryptophanyl-tRNA synthetase	AK152966|Wars|22375|tryptophanyl-tRNA synthetase	AK153337|Wars|22375|tryptophanyl-tRNA synthetase	NM_001164314|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr3_+_51288108_51288406	0.0252169	FOXN1.p2	AK087967|Rab33b|19338|RAB33B, member of RAS oncogene family	AK144706|Rab33b|19338|RAB33B, member of RAS oncogene family	AK004974|Rab33b|19338|RAB33B, member of RAS oncogene family	AK159674|Rab33b|19338|RAB33B, member of RAS oncogene family	AB232629|Rab33b|19338|RAB33B, member of RAS oncogene family	AK170483|Rab33b|19338|RAB33B, member of RAS oncogene family	AK203331|Rab33b|19338|RAB33B, member of RAS oncogene family
mm9_v1_chr3_+_144233654_144233696	0.0248906	FOXN1.p2	AK159085|Sep15|93684|selenoprotein	BC019792|Sep15|93684|selenoprotein	AK020419|Sep15|93684|selenoprotein	AK159353|Sep15|93684|selenoprotein
mm9_v1_chrX_+_74756540_74756586	0.0248612	FOXN1.p2	AK036996|Tbl1x|21372|transducin (beta)-like 1 X-linked	AK038674|Tbl1x|21372|transducin (beta)-like 1 X-linked	NM_020601|Tbl1x|21372|transducin (beta)-like 1 X-linked
mm9_v1_chr16_-_17911283_17911450	0.0247873	FOXN1.p2	AK088520|Dgcr14|27886|DiGeorge syndrome critical region gene 14	AK142684|Dgcr14|27886|DiGeorge syndrome critical region gene 14	AK148404|Dgcr14|27886|DiGeorge syndrome critical region gene 14	BC013711|Dgcr14|27886|DiGeorge syndrome critical region gene 14	AF037256|Dgcr14|27886|DiGeorge syndrome critical region gene 14	NM_001081633|Dgcr14|27886|DiGeorge syndrome critical region gene 14	NM_022408|Dgcr14|27886|DiGeorge syndrome critical region gene 14
mm9_v1_chr9_-_114549261_114549332	0.0244878	FOXN1.p2	BC036179|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC039183|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK171701|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK161842|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr11_+_59652991_59653017	0.0243132	FOXN1.p2	AK008226|Nt5m|103850|5',3'-nucleotidase, mitochondrial
mm9_v1_chr4_-_132478424_132478474	0.0241975	FOXN1.p2	BC008163|Fam76a|230789|family with sequence similarity 76, member A	AK154575|Fam76a|230789|family with sequence similarity 76, member A	NM_001163792|Fam76a|230789|family with sequence similarity 76, member A	NM_145553|Fam76a|230789|family with sequence similarity 76, member A	AK038831|Fam76a|230789|family with sequence similarity 76, member A
mm9_v1_chr9_-_85220730_85220905	0.0236732	FOXN1.p2	NM_001160378|Fam46a|212943|family with sequence similarity 46, member A	AK135132|Fam46a|212943|family with sequence similarity 46, member A	NM_001160379|Fam46a|212943|family with sequence similarity 46, member A
mm9_v1_chr17_-_57170896_57170957	0.0230379	FOXN1.p2	AK077415|Khsrp|16549|KH-type splicing regulatory protein	AK156541|Khsrp|16549|KH-type splicing regulatory protein	NM_010613|Khsrp|16549|KH-type splicing regulatory protein
mm9_v1_chr19_-_4839234_4839274	0.0230176	FOXN1.p2	AF121906|Ccs|12460|copper chaperone for superoxide dismutase	AK050072|Ccs|12460|copper chaperone for superoxide dismutase
mm9_v1_chr11_+_77796215_77796321	0.0228956	FOXN1.p2	AK170155|Phf12|268448|PHD finger protein 12	AK089226|Phf12|268448|PHD finger protein 12	AK010807|Phf12|268448|PHD finger protein 12	AK155354|Phf12|268448|PHD finger protein 12	AK053787|Phf12|268448|PHD finger protein 12	NM_174852|Phf12|268448|PHD finger protein 12
mm9_v1_chr11_-_97560943_97560996	0.0228817	FOXN1.p2	NM_001163308|Pcgf2|22658|polycomb group ring finger 2
mm9_v1_chr4_+_12016499_12016564	0.0223069	FOXN1.p2	NM_198957|C430048L16Rik|77604|RIKEN cDNA C430048L16 gene	AK169895|C430048L16Rik|77604|RIKEN cDNA C430048L16 gene	BC080741|C430048L16Rik|77604|RIKEN cDNA C430048L16 gene
mm9_v1_chr12_-_113749361_113749362	0.0218563	FOXN1.p2	BC055014|Tmem179|104885|transmembrane protein 179
mm9_v1_chr7_-_150155131_150155168	0.0215082	FOXN1.p2	BC019520|Ascl2|17173|achaete-scute complex homolog 2 (Drosophila)	AK010738|Ascl2|17173|achaete-scute complex homolog 2 (Drosophila)	AK167324|Ascl2|17173|achaete-scute complex homolog 2 (Drosophila)	NM_008554|Ascl2|17173|achaete-scute complex homolog 2 (Drosophila)
mm9_v1_chr11_-_51670563_51670645	0.0213629	FOXN1.p2	AK035317|Phf15|76901|PHD finger protein 15
mm9_v1_chr11_-_116714173_116714405	0.0213001	FOXN1.p2	AK204489|Srsf2|20382|serine/arginine-rich splicing factor 2	L13610|Srsf2|20382|serine/arginine-rich splicing factor 2	BC005493|Srsf2|20382|serine/arginine-rich splicing factor 2	AF077858|Srsf2|20382|serine/arginine-rich splicing factor 2	U14648|Srsf2|20382|serine/arginine-rich splicing factor 2	AK161873|Srsf2|20382|serine/arginine-rich splicing factor 2	AK011528|Srsf2|20382|serine/arginine-rich splicing factor 2	AK076448|Srsf2|20382|serine/arginine-rich splicing factor 2	AK086103|Srsf2|20382|serine/arginine-rich splicing factor 2	AK088042|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr3_+_67178016_67178018	0.02053	FOXN1.p2	AK007292|Mlf1|17349|myeloid leukemia factor 1	AK133448|Mlf1|17349|myeloid leukemia factor 1	NM_001039543|Mlf1|17349|myeloid leukemia factor 1	NM_010801|Mlf1|17349|myeloid leukemia factor 1
mm9_v1_chr4_+_132194931_132195032	0.0200968	FOXN1.p2	AK164591|Eya3|14050|eyes absent 3 homolog (Drosophila)	NM_210071|Eya3|14050|eyes absent 3 homolog (Drosophila)	NM_211357|Eya3|14050|eyes absent 3 homolog (Drosophila)	AK144653|Eya3|14050|eyes absent 3 homolog (Drosophila)	NM_010166|Eya3|14050|eyes absent 3 homolog (Drosophila)	BC052860|Eya3|14050|eyes absent 3 homolog (Drosophila)	U81604|Eya3|14050|eyes absent 3 homolog (Drosophila)	AK017913|5830409B07Rik|76020|RIKEN cDNA 5830409B07 gene	BC063259|Eya3|14050|eyes absent 3 homolog (Drosophila)
mm9_v1_chr17_+_88036047_88036075	0.0194827	FOXN1.p2	AK167182|Epcam|17075|epithelial cell adhesion molecule	BC005618|Epcam|17075|epithelial cell adhesion molecule	M76124|Epcam|17075|epithelial cell adhesion molecule
mm9_v1_chr6_-_29162165_29162199	0.0192381	FOXN1.p2	U00978|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1
mm9_v1_chr11_-_62270815_62270835	0.0192235	FOXN1.p2	AK035813|Ncor1|20185|nuclear receptor co-repressor 1	AK077420|Ncor1|20185|nuclear receptor co-repressor 1	NM_011308|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr2_+_32251409_32251409	0.0187837	FOXN1.p2	NM_133783|Ptges2|96979|prostaglandin E synthase 2
mm9_v1_chr17_-_35371948_35372113	0.0187442	FOXN1.p2	X96706|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
mm9_v1_chr10_+_106708886_106708980	0.0186568	FOXN1.p2	NM_001033223|Lin7a|108030|lin-7 homolog A (C. elegans)	NM_001039354|Lin7a|108030|lin-7 homolog A (C. elegans)	BC105965|Lin7a|108030|lin-7 homolog A (C. elegans)	AK160671|Lin7a|108030|lin-7 homolog A (C. elegans)	BC029721|Lin7a|108030|lin-7 homolog A (C. elegans)
mm9_v1_chr9_-_60535841_60535940	0.0184378	FOXN1.p2	AK085022|Lrrc49|102747|leucine rich repeat containing 49	NM_001146046|Lrrc49|102747|leucine rich repeat containing 49	NM_145616|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr2_+_173902521_173902654	0.0183463	FOXN1.p2	AK078110|Stx16|228960|syntaxin 16	NM_001102423|Stx16|228960|syntaxin 16	NM_001102424|Stx16|228960|syntaxin 16	NM_001102425|Stx16|228960|syntaxin 16	NM_172675|Stx16|228960|syntaxin 16	BC094436|Stx16|228960|syntaxin 16	BC095989|Stx16|228960|syntaxin 16	BC138544|Stx16|228960|syntaxin 16
mm9_v1_chr14_+_8912826_8912868	0.0173137	FOXN1.p2	NM_025938|Rpp14|67053|ribonuclease P 14 subunit (human)
mm9_v1_chr8_+_107872157_107872157	0.0172937	FOXN1.p2	NM_001081332|Slc9a5|277973|solute carrier family 9 (sodium/hydrogen exchanger), member 5
mm9_v1_chr14_-_58284047_58284093	0.0169981	FOXN1.p2	AK163516|Xpo4|57258|exportin 4
mm9_v1_chr5_-_137755938_137756050	0.0168285	FOXN1.p2	
mm9_v1_chr3_+_105255247_105255337	0.0166352	FOXN1.p2	NM_001039347|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AK147574|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr4_+_148859321_148859391	0.016025	FOXN1.p2	AK146824|Lzic|69151|leucine zipper and CTNNBIP1 domain containing
mm9_v1_chr17_+_7183208_7183431	0.0159804	FOXN1.p2	NM_026611|Rnaset2b|68195|ribonuclease T2B	AK015947|Rnaset2a|100037283|ribonuclease T2A	AK018722|Rnaset2a|100037283|ribonuclease T2A	AK084454|Rnaset2b|68195|ribonuclease T2B	AK029149|Rnaset2b|68195|ribonuclease T2B	AK019234|Rnaset2a|100037283|ribonuclease T2A	BC031496|Rnaset2a|100037283|ribonuclease T2A	BC100330|Rnaset2b|68195|ribonuclease T2B
mm9_v1_chr4_-_155366696_155366786	0.0159802	FOXN1.p2	AK033608|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	AK090344|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	AY050569|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	BC082998|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	BC057933|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	AK078083|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6	NM_080445|B3galt6|117592|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6
mm9_v1_chr10_-_120416369_120416397	0.0159532	FOXN1.p2	AF112300|Lemd3|380664|LEM domain containing 3	NM_001081193|Lemd3|380664|LEM domain containing 3
mm9_v1_chr8_-_11550714_11550782	0.0151455	FOXN1.p2	AK009937|Cars2|71941|cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)	AK010665|Cars2|71941|cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)	AK041962|Cars2|71941|cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)	AK054486|Cars2|71941|cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)	NM_024248|Cars2|71941|cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)	AK038968|Cars2|71941|cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)
mm9_v1_chr3_+_75361454_75361503	0.0151391	FOXN1.p2	NM_009250|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AK032152|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AK133770|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	BC006776|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AJ001700|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1
mm9_v1_chr3_-_107499460_107499466	0.0151085	FOXN1.p2	NM_145542|Ahcyl1|229709|S-adenosylhomocysteine hydrolase-like 1
mm9_v1_chr19_-_5609896_5610062	0.0150794	FOXN1.p2	AK195015|Kat5|81601|K(lysine) acetyltransferase 5	AK159568|Kat5|81601|K(lysine) acetyltransferase 5	AK160077|Kat5|81601|K(lysine) acetyltransferase 5	BC129967|Kat5|81601|K(lysine) acetyltransferase 5	AF528195|Kat5|81601|K(lysine) acetyltransferase 5	AF528196|Kat5|81601|K(lysine) acetyltransferase 5	BC129968|Kat5|81601|K(lysine) acetyltransferase 5	DQ139980|Kat5|81601|K(lysine) acetyltransferase 5	NM_178637|Kat5|81601|K(lysine) acetyltransferase 5	BC110675|Kat5|81601|K(lysine) acetyltransferase 5	AK143674|Kat5|81601|K(lysine) acetyltransferase 5	AK146352|Kat5|81601|K(lysine) acetyltransferase 5
mm9_v1_chr7_+_53040723_53040749	0.0149385	FOXN1.p2	BC083185|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr16_-_5204036_5204064	0.0144994	FOXN1.p2	AK187933|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
mm9_v1_chr1_+_39957733_39957796	0.0141933	FOXN1.p2	NM_008696|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr17_+_57244828_57244840	0.0140348	FOXN1.p2	BC138767|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9	BC138770|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9	AK169471|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9
mm9_v1_chr19_+_4192077_4192212	0.0139438	FOXN1.p2	AK151582|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK150344|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK152051|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK152585|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK090070|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK167538|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK159575|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	BC014828|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	U25809|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK167244|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK167880|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK167981|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	NM_031868|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK007932|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK152667|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK028392|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK153517|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform	AK202833|Ppp1ca|19045|protein phosphatase 1, catalytic subunit, alpha isoform
mm9_v1_chr12_+_62624153_62624158	0.0137277	FOXN1.p2	AK162923|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5
mm9_v1_chr16_+_75593088_75593194	0.0134952	FOXN1.p2	BC050779|Rbm11|224344|RNA binding motif protein 11	NM_198302|Rbm11|224344|RNA binding motif protein 11	AK039297|Rbm11|224344|RNA binding motif protein 11
mm9_v1_chr4_+_65274679_65274844	0.012994	FOXN1.p2	
mm9_v1_chr8_-_47296201_47296416	0.0124052	FOXN1.p2	AK197947|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4	AK199193|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4	BC003791|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4	NM_007450|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4	U27315|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4	X74510|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4	BC026925|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4	AK051172|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4	AK078077|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
mm9_v1_chrX_-_138740740_138740752	0.0121813	FOXN1.p2	AJ131398|Kcne1l|66240|potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene	NM_021487|Kcne1l|66240|potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene
mm9_v1_chr19_+_10969734_10969805	0.01214	FOXN1.p2	AK088769|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	AF251503|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	BC004070|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	NM_134129|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)
mm9_v1_chr19_-_4839283_4839342	0.0118388	FOXN1.p2	AF173379|Ccs|12460|copper chaperone for superoxide dismutase	BC026938|Ccs|12460|copper chaperone for superoxide dismutase	NM_016892|Ccs|12460|copper chaperone for superoxide dismutase
mm9_v1_chr16_-_20302299_20302462	0.011546	FOXN1.p2	AK039142|Parl|381038|presenilin associated, rhomboid-like	BC083153|Parl|381038|presenilin associated, rhomboid-like	AK151652|Parl|381038|presenilin associated, rhomboid-like	NM_001005767|Parl|381038|presenilin associated, rhomboid-like	AK150980|Parl|381038|presenilin associated, rhomboid-like	AK207637|Parl|381038|presenilin associated, rhomboid-like
mm9_v1_chr7_-_112959591_112959616	0.0114688	FOXN1.p2	NM_025301|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr10_-_114752600_114752678	0.0109707	FOXN1.p2	AK172891|Rab21|216344|RAB21, member RAS oncogene family	BC055042|Rab21|216344|RAB21, member RAS oncogene family	NM_024454|Rab21|216344|RAB21, member RAS oncogene family	BC040104|Rab21|216344|RAB21, member RAS oncogene family
mm9_v1_chr11_+_55283201_55283255	0.0108616	FOXN1.p2	AK137344|G3bp1|27041|Ras-GTPase-activating protein SH3-domain binding protein 1	BC021156|G3bp1|27041|Ras-GTPase-activating protein SH3-domain binding protein 1	AB001927|G3bp1|27041|Ras-GTPase-activating protein SH3-domain binding protein 1	NM_013716|G3bp1|27041|Ras-GTPase-activating protein SH3-domain binding protein 1
mm9_v1_chr11_+_98603041_98603154	0.0108155	FOXN1.p2	AK082121|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr5_-_109058675_109058759	0.0105091	FOXN1.p2	BC062975|Gak|231580|cyclin G associated kinase	BC065051|Gak|231580|cyclin G associated kinase	BC060622|Gak|231580|cyclin G associated kinase	AK161151|Gak|231580|cyclin G associated kinase	BC065052|Gak|231580|cyclin G associated kinase	NM_153569|Gak|231580|cyclin G associated kinase	AK146695|Gak|231580|cyclin G associated kinase
mm9_v1_chr6_+_83745021_83745052	0.0102382	FOXN1.p2	AK007240|Nagk|56174|N-acetylglucosamine kinase	AK084646|Nagk|56174|N-acetylglucosamine kinase	AJ242909|Nagk|56174|N-acetylglucosamine kinase	NM_019542|Nagk|56174|N-acetylglucosamine kinase	AK089238|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chr1_-_95375363_95375369	0.00851795	FOXN1.p2	BC023806|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr12_-_113749363_113749407	0.00850233	FOXN1.p2	AK047810|Tmem179|104885|transmembrane protein 179	NM_178915|Tmem179|104885|transmembrane protein 179	BC046482|Tmem179|104885|transmembrane protein 179	AK090230|Tmem179|104885|transmembrane protein 179
mm9_v1_chr13_-_76081142_76081219	0.00846986	FOXN1.p2	AK139158|Rhobtb3|73296|Rho-related BTB domain containing 3	AK020938|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr16_-_90727466_90727648	0.00826003	FOXN1.p2	AK011719|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	AK014084|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	AK012533|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	NM_025642|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	BC079900|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene	AK163310|2610039C10Rik|66578|RIKEN cDNA 2610039C10 gene
mm9_v1_chr9_+_45715013_45715102	0.00798111	FOXN1.p2	AK165389|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK151980|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK148416|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	BC007322|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	U48830|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7
mm9_v1_chr17_+_25377114_25377187	0.00788873	FOXN1.p2	AK158743|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	NM_001163718|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	NM_026676|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK002309|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK003675|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK170074|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	BC089019|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK169072|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene
mm9_v1_chr13_+_77847947_77848021	0.0078568	FOXN1.p2	NM_001163419|Fam172a|68675|family with sequence similarity 172, member A	NM_001163420|Fam172a|68675|family with sequence similarity 172, member A	NM_138312|Fam172a|68675|family with sequence similarity 172, member A	AK165273|Fam172a|68675|family with sequence similarity 172, member A	AK052419|Fam172a|68675|family with sequence similarity 172, member A	AK166285|Fam172a|68675|family with sequence similarity 172, member A	BC057380|Fam172a|68675|family with sequence similarity 172, member A	AK049727|Fam172a|68675|family with sequence similarity 172, member A	AF064782|Fam172a|68675|family with sequence similarity 172, member A	AK081188|Fam172a|68675|family with sequence similarity 172, member A
mm9_v1_chr1_-_82287478_82287539	0.00770336	FOXN1.p2	AK142242|Irs1|16367|insulin receptor substrate 1	X69722|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr17_+_5841371_5841416	0.00765977	FOXN1.p2	BC014814|Snx9|66616|sorting nexin 9	NM_025664|Snx9|66616|sorting nexin 9
mm9_v1_chr2_-_156218547_156218745	0.00748353	FOXN1.p2	AK013851|2900097C17Rik|347740|RIKEN cDNA 2900097C17 gene	AK136079|2900097C17Rik|347740|RIKEN cDNA 2900097C17 gene	AK077867|2900097C17Rik|347740|RIKEN cDNA 2900097C17 gene
mm9_v1_chr3_-_33042050_33042124	0.00700643	FOXN1.p2	AK034497|Pex5l|58869|peroxisomal biogenesis factor 5-like
mm9_v1_chr7_-_147222126_147222249	0.00649906	FOXN1.p2	BC025582|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK167924|Tubgcp2|74237|tubulin, gamma complex associated protein 2	BC025564|Tubgcp2|74237|tubulin, gamma complex associated protein 2	BC012519|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK153511|Tubgcp2|74237|tubulin, gamma complex associated protein 2	BC027034|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK146771|Tubgcp2|74237|tubulin, gamma complex associated protein 2	NM_133755|Tubgcp2|74237|tubulin, gamma complex associated protein 2
mm9_v1_chr19_+_10969732_10969733	0.00621295	FOXN1.p2	AK164681|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)
mm9_v1_chr19_-_7416071_7416084	0.00621073	FOXN1.p2	AK220191|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr12_+_33063902_33064058	0.00521933	FOXN1.p2	AK171109|2010109K11Rik|72123|RIKEN cDNA 2010109K11 gene
mm9_v1_chr19_-_3282905_3283048	0.00507788	FOXN1.p2	L10075|Ighmbp2|20589|immunoglobulin mu binding protein 2	BC066215|Ighmbp2|20589|immunoglobulin mu binding protein 2	AK153763|Ighmbp2|20589|immunoglobulin mu binding protein 2	BC052025|Ighmbp2|20589|immunoglobulin mu binding protein 2	BC060085|Ighmbp2|20589|immunoglobulin mu binding protein 2	AK154805|Ighmbp2|20589|immunoglobulin mu binding protein 2	AK155899|Ighmbp2|20589|immunoglobulin mu binding protein 2	NM_009212|Ighmbp2|20589|immunoglobulin mu binding protein 2
mm9_v1_chr18_+_74375999_74376040	0.00498938	FOXN1.p2	BC030938|Cxxc1|74322|CXXC finger 1 (PHD domain)
mm9_v1_chr11_+_93857338_93857584	0.00493118	FOXN1.p2	AK161623|Spag9|70834|sperm associated antigen 9	NM_027569|Spag9|70834|sperm associated antigen 9	AF327451|Spag9|70834|sperm associated antigen 9	AB047782|Spag9|70834|sperm associated antigen 9	FJ042496|Spag9|70834|sperm associated antigen 9	AK030165|Spag9|70834|sperm associated antigen 9
mm9_v1_chr18_-_81130721_81130824	0.00476678	FOXN1.p2	BC057000|Atp9b|50771|ATPase, class II, type 9B	BC079626|Atp9b|50771|ATPase, class II, type 9B	AK044331|Atp9b|50771|ATPase, class II, type 9B	AK166562|Atp9b|50771|ATPase, class II, type 9B	NM_015805|Atp9b|50771|ATPase, class II, type 9B
mm9_v1_chr1_+_55144949_55145013	0.00432511	FOXN1.p2	NM_008303|Hspe1|15528|heat shock protein 1 (chaperonin 10)
mm9_v1_chr3_+_35964919_35965040	0.00371412	FOXN1.p2	NM_172678|Acad9|229211|acyl-Coenzyme A dehydrogenase family, member 9	BC031137|Acad9|229211|acyl-Coenzyme A dehydrogenase family, member 9	AK031820|Acad9|229211|acyl-Coenzyme A dehydrogenase family, member 9	BC032213|Acad9|229211|acyl-Coenzyme A dehydrogenase family, member 9	AK028571|Acad9|229211|acyl-Coenzyme A dehydrogenase family, member 9	BC033277|Acad9|229211|acyl-Coenzyme A dehydrogenase family, member 9	AK075984|Acad9|229211|acyl-Coenzyme A dehydrogenase family, member 9	AK145423|Acad9|229211|acyl-Coenzyme A dehydrogenase family, member 9
mm9_v1_chr15_-_96473193_96473343	0.00366843	FOXN1.p2	AK162612|Slc38a1|105727|solute carrier family 38, member 1	AK081724|Slc38a1|105727|solute carrier family 38, member 1	NM_001166458|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr2_+_148506844_148506905	0.00347732	FOXN1.p2	NM_028986|Gzf1|74533|GDNF-inducible zinc finger protein 1	AK141153|Gzf1|74533|GDNF-inducible zinc finger protein 1	AK052820|Gzf1|74533|GDNF-inducible zinc finger protein 1	AK053262|Gzf1|74533|GDNF-inducible zinc finger protein 1	AK080513|Gzf1|74533|GDNF-inducible zinc finger protein 1
mm9_v1_chr8_+_86496844_86496952	0.00320754	FOXN1.p2	NM_008854|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha	BC003238|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha	BC054834|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha	M12303|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha
mm9_v1_chr6_-_120244447_120244576	0.00249595	FOXN1.p2	BC139798|B4galnt3|330406|beta-1,4-N-acetyl-galactosaminyl transferase 3	AB114826|B4galnt3|330406|beta-1,4-N-acetyl-galactosaminyl transferase 3	NM_198884|B4galnt3|330406|beta-1,4-N-acetyl-galactosaminyl transferase 3
mm9_v1_chr10_+_88194153_88194296	0.0021728	FOXN1.p2	AK018138|Arl1|104303|ADP-ribosylation factor-like 1	AK010732|Arl1|104303|ADP-ribosylation factor-like 1	NM_025859|Arl1|104303|ADP-ribosylation factor-like 1	AK167748|Arl1|104303|ADP-ribosylation factor-like 1	BC096684|Arl1|104303|ADP-ribosylation factor-like 1
mm9_v1_chr16_-_14317418_14317497	0.00188151	FOXN1.p2	AK012206|0610037P05Rik|66086|RIKEN cDNA 0610037P05 gene	BC011300|0610037P05Rik|66086|RIKEN cDNA 0610037P05 gene	NM_025345|0610037P05Rik|66086|RIKEN cDNA 0610037P05 gene	AK153894|0610037P05Rik|66086|RIKEN cDNA 0610037P05 gene	AK002785|0610037P05Rik|66086|RIKEN cDNA 0610037P05 gene	AK146884|0610037P05Rik|66086|RIKEN cDNA 0610037P05 gene
mm9_v1_chr13_-_94269762_94269770	0.00169458	FOXN1.p2	AK141957|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr19_+_32560258_32560494	0.00148608	FOXN1.p2	AF046908|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	NM_010799|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK128911|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK017558|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK042453|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK151486|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK080471|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AB041574|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1
mm9_v1_chr9_-_45714921_45714956	0.00119069	FOXN1.p2	AK028768|Rnf214|235315|ring finger protein 214	AK046190|Rnf214|235315|ring finger protein 214	BC049909|Rnf214|235315|ring finger protein 214
mm9_v1_chrX_+_162676870_162676901	0.000700384	FOXN1.p2	NM_001177961|Gpm6b|14758|glycoprotein m6b	NM_001177962|Gpm6b|14758|glycoprotein m6b	NM_023122|Gpm6b|14758|glycoprotein m6b	AK132778|Gpm6b|14758|glycoprotein m6b
mm9_v1_chr15_-_7348393_7348394	0.000681522	FOXN1.p2	AK158909|Egflam|268780|EGF-like, fibronectin type III and laminin G domains
mm9_v1_chr10_+_128185549_128185593	0.000499348	FOXN1.p2	BC049647|Wibg|78428|within bgcn homolog (Drosophila)	NM_001170869|Wibg|78428|within bgcn homolog (Drosophila)
mm9_v1_chr3_+_95733186_95733221	0.000328913	FOXN1.p2	AK088401|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK012759|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK049647|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK159446|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK147888|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr2_-_131005549_131005768	0.000304498	FOXN1.p2	BC075733|Cenpb|12616|centromere protein B	BC006628|Cenpb|12616|centromere protein B	BC053333|Cenpb|12616|centromere protein B	NM_007682|Cenpb|12616|centromere protein B
mm9_v1_chr14_-_33015012_33015098	3.93838e-05	FOXN1.p2	BC062963|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK013976|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC132019|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC132319|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC096669|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK146516|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC037022|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC069903|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AB021122|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	NM_016897|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)
