mm9_v1_chrM_+_3913_4410	13.4798	FOXQ1.p2	
mm9_v1_chr9_-_91255831_91255857	12.2727	FOXQ1.p2	AK141431|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chrM_+_3844_3864	11.7479	FOXQ1.p2	
mm9_v1_chrM_+_11812_11845	10.6744	FOXQ1.p2	
mm9_v1_chr12_+_110783593_110783620	9.97135	FOXQ1.p2	AK018105|Meg3|17263|maternally expressed 3	AK140201|Meg3|17263|maternally expressed 3
mm9_v1_chrM_+_3320_3438	9.62763	FOXQ1.p2	
mm9_v1_chrM_+_12383_12506	9.5917	FOXQ1.p2	
mm9_v1_chrM_+_14143_14189	9.29945	FOXQ1.p2	
mm9_v1_chr2_-_37502738_37502804	8.77426	FOXQ1.p2	X84692|Strbp|20744|spermatid perinuclear RNA binding protein	NM_009261|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr9_-_30957394_30957461	7.42886	FOXQ1.p2	
mm9_v1_chrM_+_13998_14016	6.33916	FOXQ1.p2	
mm9_v1_chr6_-_87793459_87793650	6.10283	FOXQ1.p2	AK211658|Cnbp|12785|cellular nucleic acid binding protein	BC003805|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chrM_+_12178_12184	5.73367	FOXQ1.p2	
mm9_v1_chrM_+_13543_13577	5.714	FOXQ1.p2	
mm9_v1_chr8_+_59934719_59934875	4.71426	FOXQ1.p2	AJ223206|Scrg1|20284|scrapie responsive gene 1	NM_009136|Scrg1|20284|scrapie responsive gene 1	BC058532|Scrg1|20284|scrapie responsive gene 1	AK046213|Scrg1|20284|scrapie responsive gene 1
mm9_v1_chr5_-_104542751_104542758	4.48454	FOXQ1.p2	BC003759|Sparcl1|13602|SPARC-like 1
mm9_v1_chr6_+_30756073_30756380	4.38563	FOXQ1.p2	AK031986|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2	AK039295|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2	AK087162|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2	AK086806|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr5_-_104542729_104542746	4.37142	FOXQ1.p2	AK134608|Sparcl1|13602|SPARC-like 1
mm9_v1_chrM_-_16187_16189	4.26071	FOXQ1.p2	
mm9_v1_chr10_-_36855292_36855411	4.17944	FOXQ1.p2	AK082623|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK136452|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr12_+_110783786_110783839	4.1736	FOXQ1.p2	BC048191|Meg3|17263|maternally expressed 3
mm9_v1_chr7_+_107789414_107789679	4.14871	FOXQ1.p2	AK191812|Rab6|19346|RAB6, member RAS oncogene family
mm9_v1_chr16_-_85120798_85120921	4.12138	FOXQ1.p2	AK194233|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr15_-_81222718_81222746	3.94858	FOXQ1.p2	AK205921|St13|70356|suppression of tumorigenicity 13
mm9_v1_chrM_+_5398_5404	3.77329	FOXQ1.p2	
mm9_v1_chrM_+_409_428	3.73643	FOXQ1.p2	
mm9_v1_chr7_+_17659388_17659431	3.72568	FOXQ1.p2	BC030357|Psg16|26436|pregnancy specific glycoprotein 16	NM_007676|Psg16|26436|pregnancy specific glycoprotein 16	U34272|Psg16|26436|pregnancy specific glycoprotein 16
mm9_v1_chr18_+_23468655_23468725	3.52565	FOXQ1.p2	X95227|Dtna|13527|dystrobrevin alpha
mm9_v1_chr7_+_53039273_53039322	3.45819	FOXQ1.p2	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr5_-_104542641_104542708	3.41549	FOXQ1.p2	U64827|Sparcl1|13602|SPARC-like 1
mm9_v1_chrM_+_5462_5556	3.41318	FOXQ1.p2	
mm9_v1_chrM_+_5322_5396	3.18312	FOXQ1.p2	AK159262|COX1|17708|cytochrome c oxidase subunit I	AK136262|COX1|17708|cytochrome c oxidase subunit I	AK138996|COX1|17708|cytochrome c oxidase subunit I	AK142003|COX1|17708|cytochrome c oxidase subunit I	AK166684|COX1|17708|cytochrome c oxidase subunit I	AK166798|COX1|17708|cytochrome c oxidase subunit I	AK166978|COX1|17708|cytochrome c oxidase subunit I
mm9_v1_chr2_-_170232008_170232013	3.02678	FOXQ1.p2	AK008957|Bcas1|76960|breast carcinoma amplified sequence 1	AK031825|Bcas1|76960|breast carcinoma amplified sequence 1
mm9_v1_chr4_+_138012860_138012969	2.97654	FOXQ1.p2	AK021100|Camk2n1|66259|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm9_v1_chrM_+_1550_2087	2.88764	FOXQ1.p2	
mm9_v1_chr5_-_104542598_104542621	2.81615	FOXQ1.p2	AK158725|Sparcl1|13602|SPARC-like 1
mm9_v1_chr1_-_134603848_134603902	2.8046	FOXQ1.p2	AK129207|Nfasc|269116|neurofascin	NM_001160318|Nfasc|269116|neurofascin
mm9_v1_chr19_-_5800268_5800325	2.79703	FOXQ1.p2	
mm9_v1_chr12_+_101447480_101447584	2.73563	FOXQ1.p2	BC021618|Calm1|12313|calmodulin 1
mm9_v1_chr7_-_29678773_29678890	2.72001	FOXQ1.p2	AK195007|Actn4|60595|actinin alpha 4
mm9_v1_chr2_+_121184334_121184455	2.71256	FOXQ1.p2	AK131953|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	NM_009897|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	Z13968|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK005076|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK018487|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous
mm9_v1_chr7_+_129776837_129777102	2.69703	FOXQ1.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr1_+_179374783_179374796	2.61623	FOXQ1.p2	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr6_-_51416921_51416984	2.59893	FOXQ1.p2	BC059107|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr19_+_7631935_7632013	2.55128	FOXQ1.p2	AK163505|Pla2g16|225845|phospholipase A2, group XVI	NM_139269|Pla2g16|225845|phospholipase A2, group XVI	AX775891|Pla2g16|225845|phospholipase A2, group XVI	AK052657|Pla2g16|225845|phospholipase A2, group XVI	AK039703|Pla2g16|225845|phospholipase A2, group XVI	AK042007|Pla2g16|225845|phospholipase A2, group XVI	BC024581|Pla2g16|225845|phospholipase A2, group XVI
mm9_v1_chr14_-_65035722_65035811	2.52049	FOXQ1.p2	AK018338|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr18_+_23468585_23468619	2.47118	FOXQ1.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr19_-_17912073_17912162	2.46181	FOXQ1.p2	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr18_-_15562126_15562266	2.43142	FOXQ1.p2	AK044074|Aqp4|11829|aquaporin 4	BC024526|Aqp4|11829|aquaporin 4	NM_009700|Aqp4|11829|aquaporin 4	AF469168|Aqp4|11829|aquaporin 4
mm9_v1_chr3_+_135488617_135488753	2.40122	FOXQ1.p2	AK085740|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135149|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135150|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr10_+_41607235_41607307	2.26454	FOXQ1.p2	NM_001013370|Sesn1|140742|sestrin 1	BC055753|Sesn1|140742|sestrin 1	AK160083|Sesn1|140742|sestrin 1	AK159531|Sesn1|140742|sestrin 1
mm9_v1_chrM_+_1091_1314	2.246	FOXQ1.p2	
mm9_v1_chr8_+_48072271_48072307	2.23343	FOXQ1.p2	AK046881|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK046797|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_177304|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079642|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079352|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK038460|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	BC096376|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm9_v1_chr11_-_51414597_51414704	2.20707	FOXQ1.p2	AK193201|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK196074|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK186800|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr7_-_148615247_148615354	2.17231	FOXQ1.p2	AF243130|Cend1|57754|cell cycle exit and neuronal differentiation 1	AK005092|Cend1|57754|cell cycle exit and neuronal differentiation 1	BC023032|Cend1|57754|cell cycle exit and neuronal differentiation 1	AK079045|Cend1|57754|cell cycle exit and neuronal differentiation 1	NM_021316|Cend1|57754|cell cycle exit and neuronal differentiation 1
mm9_v1_chr9_-_108474818_108474985	2.16661	FOXQ1.p2	AK184880|Dalrd3|67789|DALR anticodon binding domain containing 3
mm9_v1_chr1_-_137064124_137064257	2.07194	FOXQ1.p2	AK158275|Gpr37l1|171469|G protein-coupled receptor 37-like 1	NM_134438|Gpr37l1|171469|G protein-coupled receptor 37-like 1
mm9_v1_chr18_+_78016286_78016338	2.06204	FOXQ1.p2	AK157529|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK192613|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK196974|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK209959|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr11_-_53083217_53083336	2.03564	FOXQ1.p2	AK180907|Hspa4|15525|heat shock protein 4	AK148883|Hspa4|15525|heat shock protein 4
mm9_v1_chr3_-_143868114_143868170	1.98774	FOXQ1.p2	AK033097|Lmo4|16911|LIM domain only 4	AK159590|Lmo4|16911|LIM domain only 4
mm9_v1_chr18_+_69843730_69844096	1.96586	FOXQ1.p2	AK021032|Tcf4|21413|transcription factor 4	AK047926|Tcf4|21413|transcription factor 4	AK045400|Tcf4|21413|transcription factor 4	AK083152|Tcf4|21413|transcription factor 4	AK039181|Tcf4|21413|transcription factor 4	AK040346|Tcf4|21413|transcription factor 4	AK032345|Tcf4|21413|transcription factor 4
mm9_v1_chr6_+_14851348_14851478	1.90975	FOXQ1.p2	NM_053242|Foxp2|114142|forkhead box P2	AK051668|Foxp2|114142|forkhead box P2	AK085080|Foxp2|114142|forkhead box P2	AK080549|Foxp2|114142|forkhead box P2
mm9_v1_chr5_-_124053691_124053818	1.88393	FOXQ1.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr7_+_120909680_120909687	1.88258	FOXQ1.p2	AK134774|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein	AK146506|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr13_+_59234737_59234835	1.87184	FOXQ1.p2	AK021108|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr11_-_62206116_62206160	1.86694	FOXQ1.p2	AK137695|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr3_+_136598485_136598597	1.84871	FOXQ1.p2	AK053582|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chrX_-_132738383_132738456	1.83138	FOXQ1.p2	AK032140|Tceal5|331532|transcription elongation factor A (SII)-like 5	NM_177919|Tceal5|331532|transcription elongation factor A (SII)-like 5	BC100415|Tceal5|331532|transcription elongation factor A (SII)-like 5
mm9_v1_chrM_-_13886_13905	1.82821	FOXQ1.p2	
mm9_v1_chr2_+_164311755_164311970	1.8143	FOXQ1.p2	BC030298|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_026797|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr14_+_112074336_112074336	1.80658	FOXQ1.p2	NM_198865|Slitrk5|75409|SLIT and NTRK-like family, member 5
mm9_v1_chr11_-_107776248_107776368	1.80113	FOXQ1.p2	AK080762|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5	AK032260|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5	AK034065|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5
mm9_v1_chr2_-_7002344_7002370	1.79325	FOXQ1.p2	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr2_-_7002287_7002310	1.78348	FOXQ1.p2	AK137292|Celf2|14007|CUGBP, Elav-like family member 2	AK164914|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chrX_+_132806184_132806337	1.76186	FOXQ1.p2	L10905|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chrM_-_14069_14070	1.73831	FOXQ1.p2	AK138272|ND6|17722|NADH dehydrogenase subunit 6	AK140300|ND6|17722|NADH dehydrogenase subunit 6
mm9_v1_chr2_+_174171943_174171964	1.73823	FOXQ1.p2	
mm9_v1_chr15_+_3220994_3220998	1.70512	FOXQ1.p2	AK002450|Sepp1|20363|selenoprotein P, plasma, 1	AK077265|Sepp1|20363|selenoprotein P, plasma, 1	AK146774|Sepp1|20363|selenoprotein P, plasma, 1	AK148623|Sepp1|20363|selenoprotein P, plasma, 1	AK159269|Sepp1|20363|selenoprotein P, plasma, 1	AK159524|Sepp1|20363|selenoprotein P, plasma, 1	AK159911|Sepp1|20363|selenoprotein P, plasma, 1	AK159935|Sepp1|20363|selenoprotein P, plasma, 1	AK167611|Sepp1|20363|selenoprotein P, plasma, 1	AK168631|Sepp1|20363|selenoprotein P, plasma, 1	AK168747|Sepp1|20363|selenoprotein P, plasma, 1	AK168926|Sepp1|20363|selenoprotein P, plasma, 1	AK169011|Sepp1|20363|selenoprotein P, plasma, 1	AK169158|Sepp1|20363|selenoprotein P, plasma, 1	AK169362|Sepp1|20363|selenoprotein P, plasma, 1	AK159894|Sepp1|20363|selenoprotein P, plasma, 1	AK168583|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr1_-_55044032_55044295	1.69898	FOXQ1.p2	AK077993|Sf3b1|81898|splicing factor 3b, subunit 1	AK087700|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr15_+_6336747_6336872	1.67644	FOXQ1.p2	NM_001037905|Dab2|13132|disabled homolog 2 (Drosophila)	NM_001102400|Dab2|13132|disabled homolog 2 (Drosophila)	NM_023118|Dab2|13132|disabled homolog 2 (Drosophila)	AK154716|Dab2|13132|disabled homolog 2 (Drosophila)	AK162744|Dab2|13132|disabled homolog 2 (Drosophila)	AK162851|Dab2|13132|disabled homolog 2 (Drosophila)	AK168375|Dab2|13132|disabled homolog 2 (Drosophila)	U18869|Dab2|13132|disabled homolog 2 (Drosophila)	AK165810|Dab2|13132|disabled homolog 2 (Drosophila)
mm9_v1_chr8_-_108467294_108467304	1.64766	FOXQ1.p2	AK149476|Lcat|16816|lecithin cholesterol acyltransferase	NM_008490|Lcat|16816|lecithin cholesterol acyltransferase
mm9_v1_chrM_+_6139_6178	1.63011	FOXQ1.p2	
mm9_v1_chr15_+_80541675_80541764	1.6227	FOXQ1.p2	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr3_+_135488454_135488592	1.58826	FOXQ1.p2	AK028215|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_026228|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	AK016853|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr7_-_147268395_147268472	1.58608	FOXQ1.p2	AK002979|Caly|68566|calcyon neuron-specific vesicular protein	AK163466|Caly|68566|calcyon neuron-specific vesicular protein	AK003400|Caly|68566|calcyon neuron-specific vesicular protein	NM_001190385|Caly|68566|calcyon neuron-specific vesicular protein	NM_026769|Caly|68566|calcyon neuron-specific vesicular protein
mm9_v1_chr13_+_24893310_24893891	1.57236	FOXQ1.p2	AK035718|BC005537|79555|cDNA sequence BC005537	NM_024473|BC005537|79555|cDNA sequence BC005537	AK078765|BC005537|79555|cDNA sequence BC005537	BC005537|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr12_-_101963226_101963268	1.54018	FOXQ1.p2	AY341873|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	AY341881|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	BC035298|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	NM_153587|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5
mm9_v1_chr15_+_3220999_3221005	1.53515	FOXQ1.p2	AK168463|Sepp1|20363|selenoprotein P, plasma, 1	BC001991|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr2_+_136539202_136539314	1.5203	FOXQ1.p2	AK138653|Snap25|20614|synaptosomal-associated protein 25	AK161896|Snap25|20614|synaptosomal-associated protein 25	M22012|Snap25|20614|synaptosomal-associated protein 25	BC018249|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr8_+_56122680_56122847	1.51382	FOXQ1.p2	BC023461|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr16_-_31314534_31314685	1.51066	FOXQ1.p2	X82648|Apod|11815|apolipoprotein D	AK158118|Apod|11815|apolipoprotein D	AK157925|Apod|11815|apolipoprotein D	AK135046|Apod|11815|apolipoprotein D	AK157917|Apod|11815|apolipoprotein D	AK160729|Apod|11815|apolipoprotein D	AK162392|Apod|11815|apolipoprotein D	NM_007470|Apod|11815|apolipoprotein D	AK158405|Apod|11815|apolipoprotein D
mm9_v1_chr10_+_126921038_126921212	1.50709	FOXQ1.p2	BC023826|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr11_-_4987973_4988127	1.50446	FOXQ1.p2	AK178351|Ewsr1|14030|Ewing sarcoma breakpoint region 1
mm9_v1_chr4_+_154927385_154927543	1.48286	FOXQ1.p2	BC003294|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr15_+_3229159_3229218	1.47645	FOXQ1.p2	AK183252|Sepp1|20363|selenoprotein P, plasma, 1	AK190256|Sepp1|20363|selenoprotein P, plasma, 1	AK199458|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr14_-_104243541_104243687	1.47558	FOXQ1.p2	BC026553|Ednrb|13618|endothelin receptor type B
mm9_v1_chr1_-_156993820_156993943	1.46651	FOXQ1.p2	AF010448|Mr1|15064|major histocompatibility complex, class I-related	AF010449|Mr1|15064|major histocompatibility complex, class I-related	AF010450|Mr1|15064|major histocompatibility complex, class I-related	AF010452|Mr1|15064|major histocompatibility complex, class I-related	AF010453|Mr1|15064|major histocompatibility complex, class I-related	U94989|Mr1|15064|major histocompatibility complex, class I-related	AK162712|Mr1|15064|major histocompatibility complex, class I-related	NM_008209|Mr1|15064|major histocompatibility complex, class I-related	BC026137|Mr1|15064|major histocompatibility complex, class I-related	AK042119|Mr1|15064|major histocompatibility complex, class I-related	AK137171|Mr1|15064|major histocompatibility complex, class I-related	AK144040|Mr1|15064|major histocompatibility complex, class I-related	AK041171|Mr1|15064|major histocompatibility complex, class I-related
mm9_v1_chr15_+_61817102_61817119	1.44884	FOXQ1.p2	AK087961|Myc|17869|myelocytomatosis oncogene	AK133952|Myc|17869|myelocytomatosis oncogene
mm9_v1_chrM_+_9875_9905	1.44588	FOXQ1.p2	AK140187|ND4L|17720|NADH dehydrogenase subunit 4L	AK157367|ND4L|17720|NADH dehydrogenase subunit 4L	AK144853|ND4L|17720|NADH dehydrogenase subunit 4L	AK153747|ND4L|17720|NADH dehydrogenase subunit 4L
mm9_v1_chr3_+_17954324_17954405	1.41423	FOXQ1.p2	BC053007|Bhlhe22|59058|basic helix-loop-helix family, member e22	NM_021560|Bhlhe22|59058|basic helix-loop-helix family, member e22	AK076228|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr10_+_56097078_56097350	1.41176	FOXQ1.p2	AY427554|Gja1|14609|gap junction protein, alpha 1	AY427555|Gja1|14609|gap junction protein, alpha 1	NM_010288|Gja1|14609|gap junction protein, alpha 1	M63801|Gja1|14609|gap junction protein, alpha 1	AK011459|Gja1|14609|gap junction protein, alpha 1	AK036979|Gja1|14609|gap junction protein, alpha 1	AK145692|Gja1|14609|gap junction protein, alpha 1	AK161997|Gja1|14609|gap junction protein, alpha 1	AK171955|Gja1|14609|gap junction protein, alpha 1	AY427560|Gja1|14609|gap junction protein, alpha 1	BC006894|Gja1|14609|gap junction protein, alpha 1	BC055375|Gja1|14609|gap junction protein, alpha 1	AK029291|Gja1|14609|gap junction protein, alpha 1	AK165986|Gja1|14609|gap junction protein, alpha 1	X61576|Gja1|14609|gap junction protein, alpha 1	AY427556|Gja1|14609|gap junction protein, alpha 1	AY427557|Gja1|14609|gap junction protein, alpha 1	AY427558|Gja1|14609|gap junction protein, alpha 1
mm9_v1_chr11_+_20124648_20124793	1.4025	FOXQ1.p2	AK207850|Rab1|19324|RAB1, member RAS oncogene family	AK215283|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chrM_+_2750_2751	1.39708	FOXQ1.p2	
mm9_v1_chr9_-_61970402_61970500	1.36437	FOXQ1.p2	AK048088|Glce|93683|glucuronyl C5-epimerase	AK043997|Glce|93683|glucuronyl C5-epimerase	AK043361|Glce|93683|glucuronyl C5-epimerase	AF325532|Glce|93683|glucuronyl C5-epimerase
mm9_v1_chr4_+_154927575_154927585	1.35655	FOXQ1.p2	AK209108|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK213242|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK217766|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK219535|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr6_-_148392841_148392873	1.33879	FOXQ1.p2	AK137545|Tmtc1|387314|transmembrane and tetratricopeptide repeat containing 1	AK046396|Tmtc1|387314|transmembrane and tetratricopeptide repeat containing 1	NM_198967|Tmtc1|387314|transmembrane and tetratricopeptide repeat containing 1
mm9_v1_chr1_+_91351435_91351522	1.33761	FOXQ1.p2	BC096588|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr9_+_96096690_96096766	1.323	FOXQ1.p2	AK044784|Tfdp2|211586|transcription factor Dp 2	NM_001184706|Tfdp2|211586|transcription factor Dp 2	NM_001184708|Tfdp2|211586|transcription factor Dp 2	NM_178667|Tfdp2|211586|transcription factor Dp 2	AK029055|Tfdp2|211586|transcription factor Dp 2	AK053881|Tfdp2|211586|transcription factor Dp 2	AK162972|Tfdp2|211586|transcription factor Dp 2	AK079624|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr16_+_7409879_7410026	1.31407	FOXQ1.p2	AK034297|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr3_-_86590158_86590303	1.30424	FOXQ1.p2	AK205115|Dclk2|70762|doublecortin-like kinase 2
mm9_v1_chr19_-_8797689_8797858	1.27694	FOXQ1.p2	AK161280|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	NM_001161413|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr5_+_148241736_148241750	1.27363	FOXQ1.p2	AK153632|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr10_+_79389816_79389883	1.26738	FOXQ1.p2	AK154956|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)	NM_007880|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)	BC050925|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)
mm9_v1_chr3_+_17954500_17954591	1.25851	FOXQ1.p2	AK047201|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr2_+_155213904_155214229	1.24608	FOXQ1.p2	AK194878|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK201306|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK212674|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK213253|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK188182|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK191290|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK194673|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK204807|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK200413|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK212877|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr2_+_76244603_76244617	1.22378	FOXQ1.p2	AK037703|Osbpl6|99031|oxysterol binding protein-like 6	AK157944|Osbpl6|99031|oxysterol binding protein-like 6	AK220498|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr1_+_45368443_45368526	1.21892	FOXQ1.p2	AK220558|Col3a1|12825|collagen, type III, alpha 1	AK013329|Col3a1|12825|collagen, type III, alpha 1	AK041115|Col3a1|12825|collagen, type III, alpha 1	AK048546|Col3a1|12825|collagen, type III, alpha 1	AK157762|Col3a1|12825|collagen, type III, alpha 1	AK159763|Col3a1|12825|collagen, type III, alpha 1	AK159920|Col3a1|12825|collagen, type III, alpha 1	AK160048|Col3a1|12825|collagen, type III, alpha 1	AK160107|Col3a1|12825|collagen, type III, alpha 1	AK160818|Col3a1|12825|collagen, type III, alpha 1	AK147542|Col3a1|12825|collagen, type III, alpha 1	AK159985|Col3a1|12825|collagen, type III, alpha 1	AK029212|Col3a1|12825|collagen, type III, alpha 1	BC052398|Col3a1|12825|collagen, type III, alpha 1	BC043089|Col3a1|12825|collagen, type III, alpha 1	AK031544|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr10_-_60294129_60294365	1.19301	FOXQ1.p2	BC048162|Unc5b|107449|unc-5 homolog B (C. elegans)	BC057560|Unc5b|107449|unc-5 homolog B (C. elegans)	AJ487853|Unc5b|107449|unc-5 homolog B (C. elegans)	AK170513|Unc5b|107449|unc-5 homolog B (C. elegans)	AK154287|Unc5b|107449|unc-5 homolog B (C. elegans)	AK158284|Unc5b|107449|unc-5 homolog B (C. elegans)	AK018177|Unc5b|107449|unc-5 homolog B (C. elegans)	AK154271|Unc5b|107449|unc-5 homolog B (C. elegans)	NM_029770|Unc5b|107449|unc-5 homolog B (C. elegans)
mm9_v1_chr5_-_122915995_122916040	1.15381	FOXQ1.p2	AK210339|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr2_+_136539143_136539198	1.14203	FOXQ1.p2	NM_011428|Snap25|20614|synaptosomal-associated protein 25	AK078038|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr1_-_196957466_196957592	1.13647	FOXQ1.p2	M23446|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC092048|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC028945|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK134226|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr1_-_170085798_170085873	1.13456	FOXQ1.p2	AK080184|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK032161|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK043495|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK085198|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr5_-_104543106_104543114	1.12538	FOXQ1.p2	NM_010097|Sparcl1|13602|SPARC-like 1
mm9_v1_chr7_+_28438881_28439052	1.1184	FOXQ1.p2	AK013779|Ttc9b|73032|tetratricopeptide repeat domain 9B	BC089566|Ttc9b|73032|tetratricopeptide repeat domain 9B	NM_028417|Ttc9b|73032|tetratricopeptide repeat domain 9B	BC048750|Ttc9b|73032|tetratricopeptide repeat domain 9B
mm9_v1_chr5_+_104864136_104864144	1.11468	FOXQ1.p2	AK160540|Spp1|20750|secreted phosphoprotein 1	NM_009263|Spp1|20750|secreted phosphoprotein 1	AK133555|Spp1|20750|secreted phosphoprotein 1	AK145099|Spp1|20750|secreted phosphoprotein 1	AK149588|Spp1|20750|secreted phosphoprotein 1	AK150819|Spp1|20750|secreted phosphoprotein 1	AK150845|Spp1|20750|secreted phosphoprotein 1	AK151562|Spp1|20750|secreted phosphoprotein 1	AK153089|Spp1|20750|secreted phosphoprotein 1	AK154908|Spp1|20750|secreted phosphoprotein 1	AK165393|Spp1|20750|secreted phosphoprotein 1	AK165965|Spp1|20750|secreted phosphoprotein 1	AK166395|Spp1|20750|secreted phosphoprotein 1	AK171158|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr9_-_112090150_112090479	1.11227	FOXQ1.p2	BC128376|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AF324451|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_033264|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK159004|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK002950|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	BC027107|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK160860|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177615|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177620|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_028755|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chrX_+_7496899_7497045	1.0974	FOXQ1.p2	AF181560|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013892|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AF293356|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK076137|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK002969|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	BC012263|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor
mm9_v1_chr10_-_59414516_59414582	1.08904	FOXQ1.p2	BC131992|Ddit4|74747|DNA-damage-inducible transcript 4	BC132645|Ddit4|74747|DNA-damage-inducible transcript 4	BC145370|Ddit4|74747|DNA-damage-inducible transcript 4	AK017926|Ddit4|74747|DNA-damage-inducible transcript 4	NM_029083|Ddit4|74747|DNA-damage-inducible transcript 4	AK081046|Ddit4|74747|DNA-damage-inducible transcript 4
mm9_v1_chr18_-_80904852_80904931	1.07999	FOXQ1.p2	EU887569|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887571|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887572|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AF049606|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK004810|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164111|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164112|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_016791|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr16_-_85030543_85030555	1.07844	FOXQ1.p2	AK076506|App|11820|amyloid beta (A4) precursor protein	AK200287|App|11820|amyloid beta (A4) precursor protein	AK203089|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr10_+_115580947_115580958	1.07784	FOXQ1.p2	Z30313|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr11_+_48617662_48617753	1.07265	FOXQ1.p2	AK186349|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chr16_+_5885447_5885760	1.07223	FOXQ1.p2	AB041596|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AK158194|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr12_+_8944952_8945067	1.07197	FOXQ1.p2	
mm9_v1_chrM_+_67_138	1.06887	FOXQ1.p2	
mm9_v1_chr10_-_61441842_61441910	1.0575	FOXQ1.p2	NM_007731|Col13a1|12817|collagen, type XIII, alpha 1	U30292|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr12_-_101963277_101963329	1.05675	FOXQ1.p2	AK032316|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5
mm9_v1_chr6_-_48658211_48658242	1.0495	FOXQ1.p2	AK030902|Gimap6|231931|GTPase, IMAP family member 6	AK087275|Gimap6|231931|GTPase, IMAP family member 6	AF503921|Gimap6|231931|GTPase, IMAP family member 6	NM_153175|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr7_+_120909625_120909653	1.04642	FOXQ1.p2	BC020531|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr3_-_59066744_59066767	1.04488	FOXQ1.p2	BC025428|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12	AK013804|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12	NM_027571|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12
mm9_v1_chr18_-_39078304_39078358	1.04354	FOXQ1.p2	U67610|Fgf1|14164|fibroblast growth factor 1	AK035330|Fgf1|14164|fibroblast growth factor 1	NM_010197|Fgf1|14164|fibroblast growth factor 1
mm9_v1_chr11_+_51419592_51419613	1.0412	FOXQ1.p2	
mm9_v1_chr6_-_145167481_145167570	1.04009	FOXQ1.p2	BC014700|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC031623|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
mm9_v1_chr11_+_75439670_75439831	1.03203	FOXQ1.p2	AK218843|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK214842|Pitpna|18738|phosphatidylinositol transfer protein, alpha
mm9_v1_chr3_+_136598184_136598389	1.01018	FOXQ1.p2	AK218972|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK179617|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK145309|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr17_+_30272123_30272409	1.0078	FOXQ1.p2	BC027161|Zfand3|21769|zinc finger, AN1-type domain 3	EF437371|Zfand3|21769|zinc finger, AN1-type domain 3	BC024483|Zfand3|21769|zinc finger, AN1-type domain 3
mm9_v1_chr1_-_172040852_172040945	1.00738	FOXQ1.p2	AK198669|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr13_+_99124196_99124209	0.996119	FOXQ1.p2	AK164408|Foxd1|15229|forkhead box D1	AK142034|Foxd1|15229|forkhead box D1	AK132390|Foxd1|15229|forkhead box D1	AK142838|Foxd1|15229|forkhead box D1	NM_008242|Foxd1|15229|forkhead box D1	L38607|Foxd1|15229|forkhead box D1
mm9_v1_chr2_+_69588414_69588564	0.995995	FOXQ1.p2	AK079931|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK045812|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr16_+_49913305_49913369	0.989808	FOXQ1.p2	AK050387|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr5_+_148242018_148242155	0.980997	FOXQ1.p2	NM_028291|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr10_-_60915251_60915468	0.974879	FOXQ1.p2	AK133912|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	BC119539|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	NM_010124|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	U75530|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr15_-_42508294_42508522	0.96857	FOXQ1.p2	U83509|Angpt1|11600|angiopoietin 1	BC067410|Angpt1|11600|angiopoietin 1	NM_009640|Angpt1|11600|angiopoietin 1	AK172868|Angpt1|11600|angiopoietin 1	AK012027|Angpt1|11600|angiopoietin 1	AK088439|Angpt1|11600|angiopoietin 1
mm9_v1_chr11_+_98667577_98667599	0.954623	FOXQ1.p2	AK031902|Msl1|74026|male-specific lethal 1 homolog (Drosophila)
mm9_v1_chr11_-_115941908_115941939	0.948781	FOXQ1.p2	AK208273|Wbp2|22378|WW domain binding protein 2
mm9_v1_chr14_-_31166671_31166671	0.948209	FOXQ1.p2	AK147415|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit	NM_001083616|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm9_v1_chr3_+_98084352_98084426	0.936264	FOXQ1.p2	NM_008256|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK004865|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK004902|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK098104|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	BC014714|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	BC024744|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
mm9_v1_chr1_+_88024759_88024856	0.932431	FOXQ1.p2	BC002203|Psmd1|70247|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
mm9_v1_chr4_+_104829963_104829965	0.929068	FOXQ1.p2	BC005558|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr1_-_166368439_166368560	0.925907	FOXQ1.p2	EF437334|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chr4_-_96258099_96258268	0.924326	FOXQ1.p2	BC119556|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	AK018422|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	AK033961|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	AF336850|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	NM_028979|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9	AK037031|Cyp2j9|74519|cytochrome P450, family 2, subfamily j, polypeptide 9
mm9_v1_chr6_+_53523365_53523387	0.923309	FOXQ1.p2	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr19_-_5797749_5797761	0.919196	FOXQ1.p2	AK141413|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr10_-_83989221_83989289	0.914253	FOXQ1.p2	AK205593|Ckap4|216197|cytoskeleton-associated protein 4	AK212843|Ckap4|216197|cytoskeleton-associated protein 4	AK217343|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr18_+_78016353_78016381	0.904038	FOXQ1.p2	AK164193|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr6_-_124861656_124861722	0.88475	FOXQ1.p2	BC120591|Lag3|16768|lymphocyte-activation gene 3	NM_008479|Lag3|16768|lymphocyte-activation gene 3	X98113|Lag3|16768|lymphocyte-activation gene 3
mm9_v1_chr5_-_90692344_90692414	0.881603	FOXQ1.p2	AK153560|Ankrd17|81702|ankyrin repeat domain 17
mm9_v1_chr9_+_86465577_86465659	0.876652	FOXQ1.p2	NM_001145969|Rwdd2a|69519|RWD domain containing 2A	AK006533|Rwdd2a|69519|RWD domain containing 2A	BC115691|Rwdd2a|69519|RWD domain containing 2A	BC115692|Rwdd2a|69519|RWD domain containing 2A	NM_001145968|Rwdd2a|69519|RWD domain containing 2A	NM_027100|Rwdd2a|69519|RWD domain containing 2A
mm9_v1_chr7_+_128219633_128219975	0.875707	FOXQ1.p2	AK003378|Mettl9|59052|methyltransferase like 9	AK194757|Mettl9|59052|methyltransferase like 9	AK206305|Mettl9|59052|methyltransferase like 9	AK208785|Mettl9|59052|methyltransferase like 9	AK209460|Mettl9|59052|methyltransferase like 9	AK211016|Mettl9|59052|methyltransferase like 9	AK212761|Mettl9|59052|methyltransferase like 9	AK216310|Mettl9|59052|methyltransferase like 9	AK218040|Mettl9|59052|methyltransferase like 9	AK196516|Mettl9|59052|methyltransferase like 9	AK199334|Mettl9|59052|methyltransferase like 9	AK212785|Mettl9|59052|methyltransferase like 9
mm9_v1_chr11_-_59220890_59220958	0.859747	FOXQ1.p2	AK213485|Snap47|67826|synaptosomal-associated protein, 47
mm9_v1_chr10_-_80363606_80363713	0.850629	FOXQ1.p2	AF144702|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	NM_013895|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr4_+_102242664_102242699	0.836862	FOXQ1.p2	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr11_-_94902584_94902717	0.835828	FOXQ1.p2	AF267660|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	AK002647|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	BC021764|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	NM_133667|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2
mm9_v1_chr1_-_80272987_80273120	0.832679	FOXQ1.p2	
mm9_v1_chr7_+_30023324_30023364	0.824046	FOXQ1.p2	NM_001110201|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	NM_029887|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	BC109331|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	AK135529|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)
mm9_v1_chr5_+_136559785_136559909	0.821753	FOXQ1.p2	AK154335|Rasa4|54153|RAS p21 protein activator 4	AK155146|Rasa4|54153|RAS p21 protein activator 4	NM_001039103|Rasa4|54153|RAS p21 protein activator 4	NM_133914|Rasa4|54153|RAS p21 protein activator 4	BC049381|Rasa4|54153|RAS p21 protein activator 4	AK014220|Rasa4|54153|RAS p21 protein activator 4	AK133565|Rasa4|54153|RAS p21 protein activator 4	BC027230|Rasa4|54153|RAS p21 protein activator 4	AY591339|Rasa4|54153|RAS p21 protein activator 4	DQ317932|Rasa4|54153|RAS p21 protein activator 4	AK220218|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr5_-_135103569_135103648	0.819868	FOXQ1.p2	
mm9_v1_chr19_-_5093049_5093189	0.804105	FOXQ1.p2	AK211408|Cnih2|12794|cornichon homolog 2 (Drosophila)
mm9_v1_chr10_-_105011265_105011266	0.801404	FOXQ1.p2	BC138362|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	BC138363|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chr18_-_60908267_60908331	0.798935	FOXQ1.p2	AK147282|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AK035642|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr6_-_87285690_87285768	0.792786	FOXQ1.p2	AF378762|Antxr1|69538|anthrax toxin receptor 1	BC094544|Antxr1|69538|anthrax toxin receptor 1	AK031465|Antxr1|69538|anthrax toxin receptor 1	NM_054041|Antxr1|69538|anthrax toxin receptor 1
mm9_v1_chr18_-_62915799_62916000	0.789854	FOXQ1.p2	BC072581|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK012381|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK020725|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene
mm9_v1_chr19_-_38117813_38117907	0.788585	FOXQ1.p2	BC150790|Myof|226101|myoferlin	AK086107|Myof|226101|myoferlin	AK173131|Myof|226101|myoferlin	AK087302|Myof|226101|myoferlin	AK031666|Myof|226101|myoferlin	AK087176|Myof|226101|myoferlin
mm9_v1_chr7_+_97575023_97575086	0.786287	FOXQ1.p2	BC060150|Ccdc89|70054|coiled-coil domain containing 89
mm9_v1_chr5_-_143666064_143666381	0.780802	FOXQ1.p2	AK218630|Actb|11461|actin, beta	BC040513|Actb|11461|actin, beta	AB028847|Actb|11461|actin, beta	AK212447|Actb|11461|actin, beta	AY618569|Actb|11461|actin, beta	U89400|Actb|11461|actin, beta	AK187650|Actb|11461|actin, beta	AK201181|Actb|11461|actin, beta	AK204356|Actb|11461|actin, beta	AK208556|Actb|11461|actin, beta
mm9_v1_chr3_+_17954689_17954736	0.778493	FOXQ1.p2	AF218865|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr8_+_46744023_46744252	0.749078	FOXQ1.p2	AK079130|Sorbs2|234214|sorbin and SH3 domain containing 2	AK140498|Sorbs2|234214|sorbin and SH3 domain containing 2	AK050951|Sorbs2|234214|sorbin and SH3 domain containing 2	BC039163|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr8_+_46970814_46970842	0.74886	FOXQ1.p2	AF002283|Pdlim3|53318|PDZ and LIM domain 3	NM_016798|Pdlim3|53318|PDZ and LIM domain 3	AK078421|Pdlim3|53318|PDZ and LIM domain 3	AK141331|Pdlim3|53318|PDZ and LIM domain 3	AK164054|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr4_+_94406190_94406316	0.725794	FOXQ1.p2	X67553|Tek|21687|endothelial-specific receptor tyrosine kinase	X71426|Tek|21687|endothelial-specific receptor tyrosine kinase	S67051|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr18_+_23573908_23573935	0.706851	FOXQ1.p2	NM_010087|Dtna|13527|dystrobrevin alpha	NM_207650|Dtna|13527|dystrobrevin alpha
mm9_v1_chr14_-_55735399_55735483	0.706654	FOXQ1.p2	AK033956|Jph4|319984|junctophilin 4	AK034118|Jph4|319984|junctophilin 4	AK036161|Jph4|319984|junctophilin 4	AK028257|Jph4|319984|junctophilin 4
mm9_v1_chr12_-_85791897_85791926	0.698801	FOXQ1.p2	AF297860|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	NM_134042|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK164366|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK033587|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1
mm9_v1_chr4_-_82698070_82698070	0.692061	FOXQ1.p2	AB160986|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_001198811|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr2_+_177876635_177876639	0.690736	FOXQ1.p2	AK135144|Phactr3|74189|phosphatase and actin regulator 3	NM_028806|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr9_+_72596925_72596929	0.686723	FOXQ1.p2	AK195685|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr12_+_111805938_111806039	0.679279	FOXQ1.p2	AK047089|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK178752|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK196801|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK201559|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK211769|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr2_-_148701164_148701201	0.670873	FOXQ1.p2	AK161856|Cst3|13010|cystatin C	AK151160|Cst3|13010|cystatin C	AK013676|Cst3|13010|cystatin C	AK153533|Cst3|13010|cystatin C	AK166430|Cst3|13010|cystatin C
mm9_v1_chr2_+_174170886_174171016	0.664708	FOXQ1.p2	AK178212|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182236|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182338|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK183674|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK186374|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr3_-_50247306_50247534	0.662605	FOXQ1.p2	AK162233|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK170568|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141402|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141408|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AB022345|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766236|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766237|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK165599|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089202|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037742|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK076322|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK163168|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171252|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171327|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089283|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171192|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037490|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	NM_011990|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm9_v1_chr10_+_34017221_34017318	0.659026	FOXQ1.p2	NM_030203|Tspyl4|72480|TSPY-like 4	AK034070|Tspyl4|72480|TSPY-like 4	AK158197|Tspyl4|72480|TSPY-like 4	BC017540|Tspyl4|72480|TSPY-like 4	BC034656|Tspyl4|72480|TSPY-like 4	AK030740|Tspyl4|72480|TSPY-like 4	AK034414|Tspyl4|72480|TSPY-like 4	AK020999|Tspyl4|72480|TSPY-like 4
mm9_v1_chr2_+_180701920_180701946	0.649425	FOXQ1.p2	NM_001177707|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177708|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177709|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177710|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_145760|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK145879|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr2_+_174167172_174167173	0.641599	FOXQ1.p2	BC048834|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr2_+_152987262_152987297	0.637829	FOXQ1.p2	AK162435|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK048158|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK171487|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC110309|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK088012|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK047497|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK087048|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AB093220|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr2_+_120802698_120802797	0.637667	FOXQ1.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr11_-_120479218_120479273	0.625	FOXQ1.p2	AK166319|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	AK140458|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	AK144544|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine
mm9_v1_chr13_-_102453449_102453477	0.622836	FOXQ1.p2	AK138868|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK049798|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr17_+_29227908_29227961	0.621831	FOXQ1.p2	NM_001111099|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr1_+_24685377_24685468	0.619209	FOXQ1.p2	NM_026719|Lmbrd1|68421|LMBR1 domain containing 1	BC039053|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr14_-_55400722_55400814	0.618624	FOXQ1.p2	BC059004|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	NM_016972|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	AK044620|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm9_v1_chr15_+_36103768_36103779	0.617314	FOXQ1.p2	NM_001039368|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	NM_023127|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K
mm9_v1_chr8_+_68141935_68142010	0.612942	FOXQ1.p2	AK013582|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166372|March1|72925|membrane-associated ring finger (C3HC4) 1	AK086052|March1|72925|membrane-associated ring finger (C3HC4) 1	AK137337|March1|72925|membrane-associated ring finger (C3HC4) 1	AK160684|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr6_+_88045556_88045653	0.606378	FOXQ1.p2	BC002175|Rpn1|103963|ribophorin I
mm9_v1_chr18_+_37120093_37120209	0.604387	FOXQ1.p2	AY013763|Pcdha5|12941|protocadherin alpha 5	NM_009959|Pcdha5|12941|protocadherin alpha 5	AB008181|Pcdha5|12941|protocadherin alpha 5
mm9_v1_chr5_+_32794685_32794762	0.599238	FOXQ1.p2	AK017392|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr11_+_94812919_94812953	0.594574	FOXQ1.p2	AK159300|Col1a1|12842|collagen, type I, alpha 1
mm9_v1_chr9_-_101154160_101154163	0.590561	FOXQ1.p2	NM_001161362|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr16_-_29378636_29378817	0.589377	FOXQ1.p2	AK158355|Atp13a5|268878|ATPase type 13A5	BC115739|Atp13a5|268878|ATPase type 13A5	AK083102|Atp13a5|268878|ATPase type 13A5	AK083121|Atp13a5|268878|ATPase type 13A5	NM_175650|Atp13a5|268878|ATPase type 13A5
mm9_v1_chr9_+_92502908_92503003	0.587385	FOXQ1.p2	AK218100|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr19_-_5797068_5797184	0.583687	FOXQ1.p2	
mm9_v1_chr14_-_55735114_55735220	0.580477	FOXQ1.p2	AB099712|Jph4|319984|junctophilin 4	NM_177049|Jph4|319984|junctophilin 4
mm9_v1_chr12_+_30512469_30512567	0.57765	FOXQ1.p2	AK049967|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr2_+_13504271_13504305	0.573207	FOXQ1.p2	
mm9_v1_chr4_-_136454674_136454768	0.572529	FOXQ1.p2	X58861|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159343|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK002655|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK136737|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK150771|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159210|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	BC002086|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	NM_007572|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide
mm9_v1_chr1_+_180168023_180168042	0.571735	FOXQ1.p2	AK216786|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr15_+_103284200_103284376	0.570389	FOXQ1.p2	AK040192|Nckap1l|105855|NCK associated protein 1 like	NM_153505|Nckap1l|105855|NCK associated protein 1 like	AK149862|Nckap1l|105855|NCK associated protein 1 like	AK083390|Nckap1l|105855|NCK associated protein 1 like	BC037096|Nckap1l|105855|NCK associated protein 1 like	AK134039|Nckap1l|105855|NCK associated protein 1 like	BC030040|Nckap1l|105855|NCK associated protein 1 like	BC007186|Nckap1l|105855|NCK associated protein 1 like
mm9_v1_chr7_+_107423813_107423829	0.569582	FOXQ1.p2	AK164085|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr19_-_5799376_5799434	0.567793	FOXQ1.p2	AK020483|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr15_-_101947088_101947134	0.561665	FOXQ1.p2	
mm9_v1_chr2_+_177876858_177876930	0.560497	FOXQ1.p2	BC059869|Phactr3|74189|phosphatase and actin regulator 3	AK032242|Phactr3|74189|phosphatase and actin regulator 3	AY501387|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr6_-_39675456_39675512	0.559793	FOXQ1.p2	AK140431|Braf|109880|Braf transforming gene	NM_139294|Braf|109880|Braf transforming gene
mm9_v1_chr2_+_180701948_180701963	0.558204	FOXQ1.p2	AK168007|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK168602|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr2_-_102741483_102741651	0.555777	FOXQ1.p2	J05163|Cd44|12505|CD44 antigen	CT010324|Cd44|12505|CD44 antigen	X66081|Cd44|12505|CD44 antigen	X66082|Cd44|12505|CD44 antigen	X66083|Cd44|12505|CD44 antigen	X66084|Cd44|12505|CD44 antigen	BC005676|Cd44|12505|CD44 antigen	AJ251594|Cd44|12505|CD44 antigen	M30655|Cd44|12505|CD44 antigen	AK154411|Cd44|12505|CD44 antigen	AK166320|Cd44|12505|CD44 antigen	AK087472|Cd44|12505|CD44 antigen	AK152099|Cd44|12505|CD44 antigen	AK162720|Cd44|12505|CD44 antigen	AK144125|Cd44|12505|CD44 antigen	BC051388|Cd44|12505|CD44 antigen
mm9_v1_chr18_+_37644674_37644812	0.55517	FOXQ1.p2	BC017149|Pcdhb17|93888|protocadherin beta 17	NM_053142|Pcdhb17|93888|protocadherin beta 17	AK077255|Pcdhb17|93888|protocadherin beta 17	AF326310|Pcdhb17|93888|protocadherin beta 17	AY013778|Pcdhb17|93888|protocadherin beta 17
mm9_v1_chr15_+_99223622_99223695	0.551728	FOXQ1.p2	NM_001171035|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr1_+_173770709_173770788	0.542854	FOXQ1.p2	NM_013489|Cd84|12523|CD84 antigen	AF043445|Cd84|12523|CD84 antigen	AK171067|Cd84|12523|CD84 antigen	AK037385|Cd84|12523|CD84 antigen	AK040694|Cd84|12523|CD84 antigen	AK156464|Cd84|12523|CD84 antigen	AK157075|Cd84|12523|CD84 antigen	BC140952|Cd84|12523|CD84 antigen	BC144736|Cd84|12523|CD84 antigen	AK154834|Cd84|12523|CD84 antigen	AB196812|Cd84|12523|CD84 antigen	AB196813|Cd84|12523|CD84 antigen	AB196814|Cd84|12523|CD84 antigen	AB196815|Cd84|12523|CD84 antigen
mm9_v1_chr6_-_141804691_141804757	0.541416	FOXQ1.p2	AB031814|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4	NM_030687|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4
mm9_v1_chr15_-_54109855_54110038	0.541045	FOXQ1.p2	BC049782|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK140244|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	U94331|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK146105|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AB013898|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	NM_008764|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
mm9_v1_chr11_-_69476065_69476093	0.54084	FOXQ1.p2	BC026776|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK172020|Mpdu1|24070|mannose-P-dolichol utilization defect 1	BC048871|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AB024713|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK040432|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK089426|Mpdu1|24070|mannose-P-dolichol utilization defect 1
mm9_v1_chr4_+_126287086_126287097	0.540078	FOXQ1.p2	NM_001013755|5730409E04Rik|230757|RIKEN cDNA 5730409E04Rik gene	NM_001145950|5730409E04Rik|230757|RIKEN cDNA 5730409E04Rik gene
mm9_v1_chr7_+_3568955_3568990	0.537966	FOXQ1.p2	AK019099|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	NM_025348|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC120712|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC120714|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	AK006243|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC061002|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	AK003133|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3
mm9_v1_chr6_-_48036561_48036593	0.536409	FOXQ1.p2	AK156312|Zfp746|69228|zinc finger protein 746	NM_001163475|Zfp746|69228|zinc finger protein 746
mm9_v1_chr4_+_154929136_154929270	0.534943	FOXQ1.p2	AK218112|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK190349|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK191980|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK199789|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK200062|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr3_-_57105840_57105943	0.533658	FOXQ1.p2	BC083073|Tm4sf1|17112|transmembrane 4 superfamily member 1	NM_008536|Tm4sf1|17112|transmembrane 4 superfamily member 1	AK134603|Tm4sf1|17112|transmembrane 4 superfamily member 1
mm9_v1_chr2_-_60047891_60047922	0.530505	FOXQ1.p2	AK171175|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr2_+_24132788_24133018	0.525702	FOXQ1.p2	AK008977|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK009741|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK076547|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_019451|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK010020|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF200495|Il1f5|54450|interleukin 1 family, member 5 (delta)	AJ250429|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132600|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132602|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF230378|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr10_-_127188724_127188780	0.522526	FOXQ1.p2	BC125279|Gpr182|11536|G protein-coupled receptor 182	D17292|Gpr182|11536|G protein-coupled receptor 182
mm9_v1_chr11_-_55208276_55208319	0.520275	FOXQ1.p2	
mm9_v1_chr7_-_133938863_133938974	0.516129	FOXQ1.p2	
mm9_v1_chr15_+_3224767_3224812	0.511134	FOXQ1.p2	AK190911|Sepp1|20363|selenoprotein P, plasma, 1	AK192055|Sepp1|20363|selenoprotein P, plasma, 1	AK192611|Sepp1|20363|selenoprotein P, plasma, 1	AK193239|Sepp1|20363|selenoprotein P, plasma, 1	AK193304|Sepp1|20363|selenoprotein P, plasma, 1	AK193589|Sepp1|20363|selenoprotein P, plasma, 1	AK196001|Sepp1|20363|selenoprotein P, plasma, 1	AK199796|Sepp1|20363|selenoprotein P, plasma, 1	AK200678|Sepp1|20363|selenoprotein P, plasma, 1	AK201439|Sepp1|20363|selenoprotein P, plasma, 1	AK201752|Sepp1|20363|selenoprotein P, plasma, 1	AK202422|Sepp1|20363|selenoprotein P, plasma, 1	AK203751|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr4_+_115410434_115410451	0.510066	FOXQ1.p2	AK079503|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene
mm9_v1_chr1_-_195068455_195068557	0.510055	FOXQ1.p2	DQ089001|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	S75207|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK149518|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK165212|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	NM_001044751|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1
mm9_v1_chr8_-_88063071_88063191	0.507906	FOXQ1.p2	
mm9_v1_chr9_-_100407241_100407274	0.507684	FOXQ1.p2	AK053155|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK054051|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr5_+_33361479_33361562	0.506113	FOXQ1.p2	AK149224|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK083936|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	D87661|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	BC061497|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AF077002|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm9_v1_chr18_-_67712374_67712430	0.505416	FOXQ1.p2	BC058669|Spire1|68166|spire homolog 1 (Drosophila)	NM_194355|Spire1|68166|spire homolog 1 (Drosophila)	BC094375|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr5_+_93602126_93602279	0.500968	FOXQ1.p2	AK018083|Sept11|52398|septin 11	AK075989|Sept11|52398|septin 11
mm9_v1_chr5_+_123526279_123526440	0.500557	FOXQ1.p2	NM_001039723|Tmem120b|330189|transmembrane protein 120B	AK132283|Tmem120b|330189|transmembrane protein 120B	AK158123|Tmem120b|330189|transmembrane protein 120B	BC022593|Tmem120b|330189|transmembrane protein 120B	BC115785|Tmem120b|330189|transmembrane protein 120B	BC118014|Tmem120b|330189|transmembrane protein 120B	AK172110|Tmem120b|330189|transmembrane protein 120B
mm9_v1_chr2_+_164312023_164312078	0.495144	FOXQ1.p2	BC019947|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	AY187289|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr11_+_29607599_29607721	0.489225	FOXQ1.p2	AB073672|Rtn4|68585|reticulon 4
mm9_v1_chr16_-_84955488_84955582	0.488637	FOXQ1.p2	AK190067|App|11820|amyloid beta (A4) precursor protein	AK194558|App|11820|amyloid beta (A4) precursor protein	AK213784|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr19_+_34625183_34625183	0.488274	FOXQ1.p2	NM_008332|Ifit2|15958|interferon-induced protein with tetratricopeptide repeats 2
mm9_v1_chr13_-_8870975_8870975	0.484893	FOXQ1.p2	NM_001039388|Wdr37|207615|WD repeat domain 37
mm9_v1_chr3_+_60276971_60277044	0.483926	FOXQ1.p2	AK153827|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr2_+_71892681_71892690	0.483536	FOXQ1.p2	AB445011|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr6_-_71390481_71390504	0.483334	FOXQ1.p2	BC050876|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr11_+_8948594_8948715	0.481425	FOXQ1.p2	NM_001037928|Gm11992|626870|predicted gene 11992	AK154909|Gm11992|626870|predicted gene 11992	AK160996|Gm11992|626870|predicted gene 11992	BC147253|Gm11992|626870|predicted gene 11992	BC147254|Gm11992|626870|predicted gene 11992
mm9_v1_chr3_-_117571789_117571835	0.476345	FOXQ1.p2	AK170966|Snx7|76561|sorting nexin 7	AK052487|Snx7|76561|sorting nexin 7	AK011015|Snx7|76561|sorting nexin 7
mm9_v1_chr8_-_74195545_74195647	0.476282	FOXQ1.p2	AY753536|Unc13a|382018|unc-13 homolog A (C. elegans)	AK010728|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chr15_+_82005685_82005731	0.475146	FOXQ1.p2	AK197179|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr2_-_168427037_168427156	0.474116	FOXQ1.p2	EU887581|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887587|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887593|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887599|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK083119|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887583|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887585|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887589|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887591|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887595|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887597|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887601|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887603|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037178|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK044489|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr10_+_96945972_96946140	0.46831	FOXQ1.p2	BC060126|Dcn|13179|decorin	Y11757|Dcn|13179|decorin
mm9_v1_chr2_-_60047804_60047888	0.467846	FOXQ1.p2	AK166079|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr2_-_163470826_163470836	0.466888	FOXQ1.p2	BC011295|Serinc3|26943|serine incorporator 3
mm9_v1_chr6_+_124780226_124780272	0.466452	FOXQ1.p2	AK008606|Cdca3|14793|cell division cycle associated 3	AK169792|Cdca3|14793|cell division cycle associated 3	AK010409|Cdca3|14793|cell division cycle associated 3	AK028159|Cdca3|14793|cell division cycle associated 3	AK145537|Cdca3|14793|cell division cycle associated 3	BC002006|Cdca3|14793|cell division cycle associated 3	BC027172|Cdca3|14793|cell division cycle associated 3
mm9_v1_chr12_-_84938063_84938077	0.462921	FOXQ1.p2	AK090334|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr6_-_48658182_48658205	0.460608	FOXQ1.p2	AK050328|Gimap6|231931|GTPase, IMAP family member 6	AK160244|Gimap6|231931|GTPase, IMAP family member 6	BC028779|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr10_+_127669118_127669147	0.457674	FOXQ1.p2	BC052884|Timeless|21853|timeless homolog (Drosophila)	NM_001136082|Timeless|21853|timeless homolog (Drosophila)	NM_001164080|Timeless|21853|timeless homolog (Drosophila)	NM_001164081|Timeless|21853|timeless homolog (Drosophila)	AK162012|Timeless|21853|timeless homolog (Drosophila)	AK153838|Timeless|21853|timeless homolog (Drosophila)	BC064788|Timeless|21853|timeless homolog (Drosophila)	AB019001|Timeless|21853|timeless homolog (Drosophila)	AF071506|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr2_+_164312087_164312169	0.456815	FOXQ1.p2	AK013571|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr9_-_108551631_108551731	0.455514	FOXQ1.p2	AK165028|Arih2|23807|ariadne homolog 2 (Drosophila)	AK149936|Arih2|23807|ariadne homolog 2 (Drosophila)	BC051998|Arih2|23807|ariadne homolog 2 (Drosophila)	BC052422|Arih2|23807|ariadne homolog 2 (Drosophila)	NM_011790|Arih2|23807|ariadne homolog 2 (Drosophila)	AK011094|Arih2|23807|ariadne homolog 2 (Drosophila)	AK168055|Arih2|23807|ariadne homolog 2 (Drosophila)
mm9_v1_chr2_-_163470870_163470922	0.451868	FOXQ1.p2	NM_012032|Serinc3|26943|serine incorporator 3
mm9_v1_chr15_+_73582208_73582380	0.451396	FOXQ1.p2	BC027445|Ptp4a3|19245|protein tyrosine phosphatase 4a3	CT010215|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK003954|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr18_-_35374663_35374683	0.450794	FOXQ1.p2	AK122278|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK036155|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK044705|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046774|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	NM_178005|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr17_+_21093929_21094049	0.450596	FOXQ1.p2	AK178876|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
mm9_v1_chr11_-_101087738_101087767	0.449735	FOXQ1.p2	AK045374|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK138942|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	U60453|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK164192|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK140694|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	NM_007970|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr19_+_23240506_23240595	0.448114	FOXQ1.p2	AK187278|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr5_-_122907269_122907331	0.442568	FOXQ1.p2	AK195483|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK198267|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK202908|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK209825|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC022584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr16_-_84955086_84955166	0.438124	FOXQ1.p2	AK190928|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr18_+_37649118_37649272	0.432372	FOXQ1.p2	AK140341|Pcdhb18|93889|protocadherin beta 18	NM_053143|Pcdhb18|93889|protocadherin beta 18	BC099958|Pcdhb18|93889|protocadherin beta 18	AY013779|Pcdhb18|93889|protocadherin beta 18
mm9_v1_chr18_-_35374531_35374610	0.430475	FOXQ1.p2	AK043173|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046818|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK049920|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK043784|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr7_-_148452299_148452324	0.430271	FOXQ1.p2	NM_016850|Irf7|54123|interferon regulatory factor 7	U73037|Irf7|54123|interferon regulatory factor 7	AK004349|Irf7|54123|interferon regulatory factor 7	AK150608|Irf7|54123|interferon regulatory factor 7	AK158378|Irf7|54123|interferon regulatory factor 7	AK158403|Irf7|54123|interferon regulatory factor 7	AK089869|Irf7|54123|interferon regulatory factor 7	AK002830|Irf7|54123|interferon regulatory factor 7	AK079685|Irf7|54123|interferon regulatory factor 7	AK150403|Irf7|54123|interferon regulatory factor 7	AK151470|Irf7|54123|interferon regulatory factor 7	AK152401|Irf7|54123|interferon regulatory factor 7	AK152403|Irf7|54123|interferon regulatory factor 7	AK153054|Irf7|54123|interferon regulatory factor 7	AK155950|Irf7|54123|interferon regulatory factor 7	AK159142|Irf7|54123|interferon regulatory factor 7	AK159883|Irf7|54123|interferon regulatory factor 7
mm9_v1_chr5_-_92497375_92497432	0.429554	FOXQ1.p2	AK200302|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chrX_+_13209894_13209986	0.428196	FOXQ1.p2	DQ103766|Gpr34|23890|G protein-coupled receptor 34	DQ103767|Gpr34|23890|G protein-coupled receptor 34	NM_011823|Gpr34|23890|G protein-coupled receptor 34	AK033675|Gpr34|23890|G protein-coupled receptor 34	AK039528|Gpr34|23890|G protein-coupled receptor 34	AK039041|Gpr34|23890|G protein-coupled receptor 34	AK140507|Gpr34|23890|G protein-coupled receptor 34
mm9_v1_chr11_+_51926650_51926652	0.427696	FOXQ1.p2	AK199825|Ppp2ca|19052|protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
mm9_v1_chr12_+_99866348_99866525	0.427042	FOXQ1.p2	AK036359|Spata7|104871|spermatogenesis associated 7	AK169473|Spata7|104871|spermatogenesis associated 7	AK045704|Spata7|104871|spermatogenesis associated 7	AK153698|Spata7|104871|spermatogenesis associated 7	BC046960|Spata7|104871|spermatogenesis associated 7	NM_178914|Spata7|104871|spermatogenesis associated 7	AK161308|Spata7|104871|spermatogenesis associated 7	AK077500|Spata7|104871|spermatogenesis associated 7	DQ196101|Spata7|104871|spermatogenesis associated 7
mm9_v1_chr18_+_69753035_69753127	0.425853	FOXQ1.p2	AK014343|Tcf4|21413|transcription factor 4	U16321|Tcf4|21413|transcription factor 4	AK132140|Tcf4|21413|transcription factor 4	BC014293|Tcf4|21413|transcription factor 4
mm9_v1_chr2_+_131763454_131763725	0.425071	FOXQ1.p2	AK215651|Prnp|19122|prion protein	AK205534|Prnp|19122|prion protein	AK213884|Prnp|19122|prion protein	AK206219|Prnp|19122|prion protein
mm9_v1_chr6_-_124761078_124761358	0.420825	FOXQ1.p2	AK216486|Tpi1|21991|triosephosphate isomerase 1	AK201708|Tpi1|21991|triosephosphate isomerase 1	AK191907|Tpi1|21991|triosephosphate isomerase 1	AK191323|Tpi1|21991|triosephosphate isomerase 1	AK190112|Tpi1|21991|triosephosphate isomerase 1	AK204501|Tpi1|21991|triosephosphate isomerase 1
mm9_v1_chr11_-_51419012_51419040	0.420525	FOXQ1.p2	AK207379|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr19_-_23727286_23727303	0.420144	FOXQ1.p2	BC049563|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene	AK006473|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene	NM_026188|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene	AK014972|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene
mm9_v1_chr17_+_71168939_71168940	0.419791	FOXQ1.p2	AK034215|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr10_-_90616085_90616118	0.41966	FOXQ1.p2	AK186132|Tmpo|21917|thymopoietin	AK199505|Tmpo|21917|thymopoietin
mm9_v1_chr11_-_99105293_99105435	0.415151	FOXQ1.p2	BC079890|Krt222|268481|keratin 222	AK031954|Krt222|268481|keratin 222	NM_172946|Krt222|268481|keratin 222	AK044068|Krt222|268481|keratin 222	AK138778|Krt222|268481|keratin 222
mm9_v1_chr16_+_30599808_30599823	0.414226	FOXQ1.p2	AK083036|Fam43a|224093|family with sequence similarity 43, member A	NM_177632|Fam43a|224093|family with sequence similarity 43, member A	AK137950|Fam43a|224093|family with sequence similarity 43, member A	BC099947|Fam43a|224093|family with sequence similarity 43, member A
mm9_v1_chr7_+_86418127_86418181	0.414113	FOXQ1.p2	AK008690|Abhd2|54608|abhydrolase domain containing 2	AK053460|Abhd2|54608|abhydrolase domain containing 2	AK139526|Abhd2|54608|abhydrolase domain containing 2	NM_018811|Abhd2|54608|abhydrolase domain containing 2	AF546701|Abhd2|54608|abhydrolase domain containing 2	BC089477|Abhd2|54608|abhydrolase domain containing 2	AF201730|Abhd2|54608|abhydrolase domain containing 2	BC027098|Abhd2|54608|abhydrolase domain containing 2
mm9_v1_chr17_-_45722206_45722315	0.413404	FOXQ1.p2	AK214128|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AK215659|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AK216350|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AK220067|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr2_+_76244559_76244570	0.411775	FOXQ1.p2	AK004353|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr7_-_87547589_87547748	0.410715	FOXQ1.p2	L26489|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_011046|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr3_-_144372258_144372323	0.408519	FOXQ1.p2	AK178501|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)
mm9_v1_chr4_+_45811893_45811934	0.408375	FOXQ1.p2	NM_028270|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK088396|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	BC086768|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1
mm9_v1_chr16_+_4940212_4940403	0.406628	FOXQ1.p2	AK183937|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	AK193716|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
mm9_v1_chr17_-_45729199_45729441	0.406098	FOXQ1.p2	EU180577|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	BC006812|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AF131212|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	NM_022880|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr17_-_36045556_36045571	0.405756	FOXQ1.p2	AK042804|Atat1|73242|alpha tubulin acetyltransferase 1
mm9_v1_chr10_+_20059547_20059574	0.404947	FOXQ1.p2	AK169491|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr5_+_31350991_31351042	0.401282	FOXQ1.p2	NM_027855|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK151307|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK151366|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	BC049637|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AB009018|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK002276|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK169267|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	BC057097|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene
mm9_v1_chrX_+_20271802_20271845	0.399853	FOXQ1.p2	AK214881|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr11_+_43247209_43247232	0.398263	FOXQ1.p2	NM_148673|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	NM_198936|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr11_-_118162557_118162687	0.39779	FOXQ1.p2	
mm9_v1_chr5_-_135103492_135103493	0.397231	FOXQ1.p2	
mm9_v1_chr6_-_148937854_148937926	0.3946	FOXQ1.p2	AK143126|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr11_-_22185840_22185840	0.392295	FOXQ1.p2	AF424697|Ehbp1|216565|EH domain binding protein 1	NM_153078|Ehbp1|216565|EH domain binding protein 1
mm9_v1_chr2_-_163470787_163470825	0.388497	FOXQ1.p2	AB029499|Serinc3|26943|serine incorporator 3	AF181684|Serinc3|26943|serine incorporator 3	BC022901|Serinc3|26943|serine incorporator 3	AK170350|Serinc3|26943|serine incorporator 3	AK152720|Serinc3|26943|serine incorporator 3	AK159347|Serinc3|26943|serine incorporator 3	AK150106|Serinc3|26943|serine incorporator 3	AK155921|Serinc3|26943|serine incorporator 3	AK159488|Serinc3|26943|serine incorporator 3	AK159819|Serinc3|26943|serine incorporator 3	AK160005|Serinc3|26943|serine incorporator 3	AK160055|Serinc3|26943|serine incorporator 3	AK161981|Serinc3|26943|serine incorporator 3	AK164807|Serinc3|26943|serine incorporator 3	AK166924|Serinc3|26943|serine incorporator 3	AK145604|Serinc3|26943|serine incorporator 3
mm9_v1_chr4_+_104829951_104829954	0.387985	FOXQ1.p2	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr11_-_6333725_6333827	0.387668	FOXQ1.p2	AK178770|H2afv|77605|H2A histone family, member V
mm9_v1_chr12_-_70260137_70260172	0.387621	FOXQ1.p2	NM_009093|Rps29|20090|ribosomal protein S29
mm9_v1_chr16_+_43640198_43640217	0.386476	FOXQ1.p2	AK080813|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr6_-_58974400_58974495	0.386275	FOXQ1.p2	BC005554|Fam13a|58909|family with sequence similarity 13, member A	BC060978|Fam13a|58909|family with sequence similarity 13, member A	AK052421|Fam13a|58909|family with sequence similarity 13, member A	BC054053|Fam13a|58909|family with sequence similarity 13, member A	AJ510136|Fam13a|58909|family with sequence similarity 13, member A	AK054311|Fam13a|58909|family with sequence similarity 13, member A	BC080861|Fam13a|58909|family with sequence similarity 13, member A	NM_153574|Fam13a|58909|family with sequence similarity 13, member A
mm9_v1_chrX_-_149078963_149079085	0.385075	FOXQ1.p2	AK029338|Shroom2|110380|shroom family member 2	AK032256|Shroom2|110380|shroom family member 2	AK049850|Shroom2|110380|shroom family member 2	BC092373|Shroom2|110380|shroom family member 2
mm9_v1_chr6_-_83781657_83781701	0.384761	FOXQ1.p2	BC017133|Paip2b|232164|poly(A) binding protein interacting protein 2B	BC034096|Paip2b|232164|poly(A) binding protein interacting protein 2B	BC039969|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK173114|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK168804|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK045922|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr4_-_131394135_131394216	0.383244	FOXQ1.p2	BC080736|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	BC048694|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK052720|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	D88187|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK148515|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_001083119|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_011214|Ptpru|19273|protein tyrosine phosphatase, receptor type, U
mm9_v1_chr1_+_24685711_24685764	0.382435	FOXQ1.p2	AK158982|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr19_-_40588219_40588234	0.382398	FOXQ1.p2	AK087553|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_178362|Sorbs1|20411|sorbin and SH3 domain containing 1	BC012703|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr17_+_26852700_26852741	0.382312	FOXQ1.p2	BC113191|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	BC113192|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr2_-_7317513_7317626	0.382124	FOXQ1.p2	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr5_+_72091188_72091254	0.382014	FOXQ1.p2	BC157920|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	BC130258|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	NM_008069|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm9_v1_chr17_-_45704908_45704999	0.379944	FOXQ1.p2	
mm9_v1_chr6_-_142650737_142650793	0.379068	FOXQ1.p2	D86037|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	D86038|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	AF003531|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	U97066|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_001044720|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_011511|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021041|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021042|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
mm9_v1_chr6_+_121133684_121133684	0.378732	FOXQ1.p2	AK087637|Pex26|74043|peroxisomal biogenesis factor 26	NM_028730|Pex26|74043|peroxisomal biogenesis factor 26
mm9_v1_chr12_-_79944026_79944112	0.375396	FOXQ1.p2	
mm9_v1_chr19_-_18655597_18655704	0.374214	FOXQ1.p2	AK205236|Ostf1|20409|osteoclast stimulating factor 1	AK207431|Ostf1|20409|osteoclast stimulating factor 1	AK209921|Ostf1|20409|osteoclast stimulating factor 1
mm9_v1_chr11_+_95198329_95198359	0.371056	FOXQ1.p2	AK077747|Fam117a|215512|family with sequence similarity 117, memberA	AK143632|Fam117a|215512|family with sequence similarity 117, memberA	AK165378|Fam117a|215512|family with sequence similarity 117, memberA	AK167417|Fam117a|215512|family with sequence similarity 117, memberA	NM_172543|Fam117a|215512|family with sequence similarity 117, memberA	BC055690|Fam117a|215512|family with sequence similarity 117, memberA
mm9_v1_chr7_+_53039094_53039107	0.370372	FOXQ1.p2	BC059845|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr12_-_104681842_104681891	0.367645	FOXQ1.p2	AY090098|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK040279|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK160503|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC086889|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC100588|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	NM_029803|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A
mm9_v1_chr14_+_122879276_122879283	0.364566	FOXQ1.p2	AK158319|Zic2|22772|zinc finger protein of the cerebellum 2
mm9_v1_chr6_+_22825464_22825502	0.362833	FOXQ1.p2	AK081698|Ptprz1|19283|protein tyrosine phosphatase, receptor type Z, polypeptide 1	NM_001081306|Ptprz1|19283|protein tyrosine phosphatase, receptor type Z, polypeptide 1
mm9_v1_chr1_-_173537404_173537546	0.362643	FOXQ1.p2	M84412|Ly9|17085|lymphocyte antigen 9	BC055380|Ly9|17085|lymphocyte antigen 9	BC066212|Ly9|17085|lymphocyte antigen 9	AB196804|Ly9|17085|lymphocyte antigen 9	AB196805|Ly9|17085|lymphocyte antigen 9	AB196806|Ly9|17085|lymphocyte antigen 9	AB196807|Ly9|17085|lymphocyte antigen 9	AK087345|Ly9|17085|lymphocyte antigen 9	BC095921|Ly9|17085|lymphocyte antigen 9	AK134106|Ly9|17085|lymphocyte antigen 9	AK150121|Ly9|17085|lymphocyte antigen 9	AK042288|Ly9|17085|lymphocyte antigen 9	AK088815|Ly9|17085|lymphocyte antigen 9	AK040306|Ly9|17085|lymphocyte antigen 9	NM_008534|Ly9|17085|lymphocyte antigen 9	AF244130|Ly9|17085|lymphocyte antigen 9	AF244131|Ly9|17085|lymphocyte antigen 9
mm9_v1_chr19_-_41289262_41289457	0.361806	FOXQ1.p2	AK008994|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK159802|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr1_-_57029287_57029345	0.356199	FOXQ1.p2	AK129270|Satb2|212712|special AT-rich sequence binding protein 2
mm9_v1_chr1_+_45390415_45390462	0.355433	FOXQ1.p2	BC039923|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr1_+_59538966_59539075	0.353922	FOXQ1.p2	NM_008057|Fzd7|14369|frizzled homolog 7 (Drosophila)	BC063077|Fzd7|14369|frizzled homolog 7 (Drosophila)
mm9_v1_chr17_-_37160143_37160232	0.350875	FOXQ1.p2	AY566830|Mog|17441|myelin oligodendrocyte glycoprotein	BC080860|Mog|17441|myelin oligodendrocyte glycoprotein	U64572|Mog|17441|myelin oligodendrocyte glycoprotein	BC050763|Mog|17441|myelin oligodendrocyte glycoprotein	AK135036|Mog|17441|myelin oligodendrocyte glycoprotein
mm9_v1_chr19_-_55177562_55177604	0.350532	FOXQ1.p2	AK047295|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial	AK173202|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial
mm9_v1_chr2_-_34681707_34681829	0.347746	FOXQ1.p2	AK033129|Fbxw2|30050|F-box and WD-40 domain protein 2	AK004015|Fbxw2|30050|F-box and WD-40 domain protein 2	AK005103|Fbxw2|30050|F-box and WD-40 domain protein 2	AK040764|Fbxw2|30050|F-box and WD-40 domain protein 2	AK145405|Fbxw2|30050|F-box and WD-40 domain protein 2	AK133758|Fbxw2|30050|F-box and WD-40 domain protein 2	AK045743|Fbxw2|30050|F-box and WD-40 domain protein 2	AK014858|Fbxw2|30050|F-box and WD-40 domain protein 2	AK184904|Fbxw2|30050|F-box and WD-40 domain protein 2	AK078815|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164769|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164770|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164772|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_013890|Fbxw2|30050|F-box and WD-40 domain protein 2	BC003834|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr10_-_61441817_61441832	0.347622	FOXQ1.p2	BC034164|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr15_+_4105188_4105206	0.346508	FOXQ1.p2	
mm9_v1_chr13_+_43497279_43497424	0.340062	FOXQ1.p2	AK140839|Nol7|70078|nucleolar protein 7
mm9_v1_chr13_-_54561296_54561396	0.340015	FOXQ1.p2	AK216441|Thoc3|73666|THO complex 3
mm9_v1_chr6_-_56654667_56654692	0.338281	FOXQ1.p2	BC048459|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK008480|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK011218|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC061085|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK009617|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132626|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132628|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_025520|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr1_+_59543450_59543567	0.337871	FOXQ1.p2	
mm9_v1_chr19_+_12040391_12040437	0.337854	FOXQ1.p2	BC107327|Osbp|76303|oxysterol binding protein	BC107328|Osbp|76303|oxysterol binding protein
mm9_v1_chr9_+_19426674_19426747	0.337275	FOXQ1.p2	AK030030|Zfp317|244713|zinc finger protein 317
mm9_v1_chr19_+_25073995_25074066	0.336222	FOXQ1.p2	AK050543|Dock8|76088|dedicator of cytokinesis 8	NM_028785|Dock8|76088|dedicator of cytokinesis 8	BC141358|Dock8|76088|dedicator of cytokinesis 8	AK170538|Dock8|76088|dedicator of cytokinesis 8
mm9_v1_chr2_-_91516101_91516113	0.336209	FOXQ1.p2	BC024457|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr1_-_180259336_180259529	0.333713	FOXQ1.p2	AK049375|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK080656|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr17_-_56207814_56207863	0.330811	FOXQ1.p2	
mm9_v1_chr10_+_25079661_25079716	0.329806	FOXQ1.p2	AK170275|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK167434|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	BC023768|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK052475|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr7_+_52882857_52882906	0.329244	FOXQ1.p2	AK156602|Rasip1|69903|Ras interacting protein 1	BC127059|Rasip1|69903|Ras interacting protein 1	BC028483|Rasip1|69903|Ras interacting protein 1	BC150766|Rasip1|69903|Ras interacting protein 1	NM_028544|Rasip1|69903|Ras interacting protein 1
mm9_v1_chr9_+_72892614_72892671	0.328916	FOXQ1.p2	BC008173|Rab27a|11891|RAB27A, member RAS oncogene family	BC009656|Rab27a|11891|RAB27A, member RAS oncogene family	AK030529|Rab27a|11891|RAB27A, member RAS oncogene family	NM_023635|Rab27a|11891|RAB27A, member RAS oncogene family
mm9_v1_chr16_-_85455370_85455468	0.327724	FOXQ1.p2	
mm9_v1_chr5_+_145888588_145888809	0.324641	FOXQ1.p2	AK192837|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr7_-_35005925_35005938	0.323014	FOXQ1.p2	AK194043|Gpi1|14751|glucose phosphate isomerase 1	AK196108|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr5_-_100391613_100391631	0.322144	FOXQ1.p2	AK012230|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr11_+_106889431_106889676	0.321444	FOXQ1.p2	AK007422|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	NM_001163473|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	BC124997|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	BC125006|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene
mm9_v1_chr19_-_7877136_7877156	0.320739	FOXQ1.p2	BC014805|BC014805|236149|cDNA sequence BC014805	NM_146232|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr8_+_72696276_72696336	0.319646	FOXQ1.p2	AK032711|Tmem161a|234371|transmembrane protein 161A	AK082916|Tmem161a|234371|transmembrane protein 161A	AK049979|Tmem161a|234371|transmembrane protein 161A	NM_145597|Tmem161a|234371|transmembrane protein 161A	AK082758|Tmem161a|234371|transmembrane protein 161A	AK147962|Tmem161a|234371|transmembrane protein 161A	AK088569|Tmem161a|234371|transmembrane protein 161A	AK167517|Tmem161a|234371|transmembrane protein 161A	BC021367|Tmem161a|234371|transmembrane protein 161A
mm9_v1_chr8_+_23868194_23868239	0.319371	FOXQ1.p2	AK053476|Plat|18791|plasminogen activator, tissue	NM_008872|Plat|18791|plasminogen activator, tissue	BC011256|Plat|18791|plasminogen activator, tissue	AK135857|Plat|18791|plasminogen activator, tissue	AK135965|Plat|18791|plasminogen activator, tissue	AK141665|Plat|18791|plasminogen activator, tissue	AK159620|Plat|18791|plasminogen activator, tissue	AK166639|Plat|18791|plasminogen activator, tissue	BC061508|Plat|18791|plasminogen activator, tissue	BC057967|Plat|18791|plasminogen activator, tissue	J03520|Plat|18791|plasminogen activator, tissue
mm9_v1_chr19_-_11410534_11410635	0.318235	FOXQ1.p2	AK085297|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC019784|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC024402|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AF237917|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_027836|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK149890|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK018686|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK151261|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK152098|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_001025610|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK046559|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7
mm9_v1_chr3_-_27795287_27795289	0.318199	FOXQ1.p2	AK053134|Tmem212|208613|transmembrane protein 212	BC119391|Tmem212|208613|transmembrane protein 212	BC119393|Tmem212|208613|transmembrane protein 212	NM_001164437|Tmem212|208613|transmembrane protein 212
mm9_v1_chr7_-_93924317_93924373	0.316937	FOXQ1.p2	BC119604|Folh1|53320|folate hydrolase	BC119605|Folh1|53320|folate hydrolase	AK002920|Folh1|53320|folate hydrolase	AF026380|Folh1|53320|folate hydrolase	AK090289|Folh1|53320|folate hydrolase	NM_001159706|Folh1|53320|folate hydrolase	NM_016770|Folh1|53320|folate hydrolase
mm9_v1_chr18_+_69504145_69504185	0.314812	FOXQ1.p2	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr11_+_29642253_29642464	0.312505	FOXQ1.p2	AK186869|Rtn4|68585|reticulon 4	AK186438|Rtn4|68585|reticulon 4	AK047253|Rtn4|68585|reticulon 4
mm9_v1_chr19_-_43749067_43749205	0.310885	FOXQ1.p2	AF377993|Slc25a28|246696|solute carrier family 25, member 28	AF377994|Slc25a28|246696|solute carrier family 25, member 28
mm9_v1_chr3_-_146433544_146433656	0.309413	FOXQ1.p2	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr19_-_40588193_40588218	0.308837	FOXQ1.p2	AK122487|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr5_+_123093892_123094082	0.308015	FOXQ1.p2	AK144585|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038839|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038845|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038887|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_011027|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK171132|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC062808|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC141120|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145211|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145050|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ009823|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489296|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489297|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128303|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128304|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7
mm9_v1_chr2_+_34631438_34631582	0.30774	FOXQ1.p2	AK218616|Hspa5|14828|heat shock protein 5	AK186478|Hspa5|14828|heat shock protein 5	AK192310|Hspa5|14828|heat shock protein 5
mm9_v1_chr3_+_136333083_136333098	0.306396	FOXQ1.p2	AK146387|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr10_-_127617294_127617366	0.30445	FOXQ1.p2	AK147838|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	NM_001039080|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chr6_+_38542722_38542769	0.30391	FOXQ1.p2	BC002314|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr8_+_32239179_32239274	0.302607	FOXQ1.p2	AK004356|Rnf122|68867|ring finger protein 122
mm9_v1_chr18_+_37906739_37906841	0.298623	FOXQ1.p2	AY013793|Pcdhga10|93722|protocadherin gamma subfamily A, 10	NM_033593|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chr6_-_83781704_83781750	0.297442	FOXQ1.p2	AK140686|Paip2b|232164|poly(A) binding protein interacting protein 2B	AK159287|Paip2b|232164|poly(A) binding protein interacting protein 2B	NM_146169|Paip2b|232164|poly(A) binding protein interacting protein 2B
mm9_v1_chr5_-_35441823_35441913	0.297395	FOXQ1.p2	AK206813|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1
mm9_v1_chr11_-_106576550_106576578	0.295448	FOXQ1.p2	AK084527|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	AK169431|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	BC008519|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr4_+_154932115_154932142	0.295153	FOXQ1.p2	
mm9_v1_chr5_+_130731488_130731494	0.293947	FOXQ1.p2	AK045279|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	NM_178897|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
mm9_v1_chr2_+_90936845_90937066	0.293219	FOXQ1.p2	AK154945|Sfpi1|20375|SFFV proviral integration 1	AK155085|Sfpi1|20375|SFFV proviral integration 1	AK153524|Sfpi1|20375|SFFV proviral integration 1	AK142246|Sfpi1|20375|SFFV proviral integration 1	M38252|Sfpi1|20375|SFFV proviral integration 1	NM_011355|Sfpi1|20375|SFFV proviral integration 1	M32370|Sfpi1|20375|SFFV proviral integration 1	BC003815|Sfpi1|20375|SFFV proviral integration 1	L03215|Sfpi1|20375|SFFV proviral integration 1
mm9_v1_chr2_-_126943852_126943869	0.291315	FOXQ1.p2	AK193653|Ncaph|215387|non-SMC condensin I complex, subunit H
mm9_v1_chr7_+_116081258_116081309	0.288405	FOXQ1.p2	AK217928|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F	AK192917|Eif3f|66085|eukaryotic translation initiation factor 3, subunit F
mm9_v1_chr12_+_56937309_56937356	0.286467	FOXQ1.p2	AK154678|Brms1l|52592|breast cancer metastasis-suppressor 1-like	AK155742|Brms1l|52592|breast cancer metastasis-suppressor 1-like	NM_001037756|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr6_+_38484796_38484868	0.285397	FOXQ1.p2	AK003231|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	BC059710|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	AK008291|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	NM_025363|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	AK009186|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene
mm9_v1_chr7_+_138589597_138589692	0.284753	FOXQ1.p2	AK078636|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain
mm9_v1_chr2_-_57905140_57905276	0.28242	FOXQ1.p2	DQ334270|Ermn|77767|ermin, ERM-like protein	BC089515|Ermn|77767|ermin, ERM-like protein	NM_029972|Ermn|77767|ermin, ERM-like protein	BC090670|Ermn|77767|ermin, ERM-like protein	AK078089|Ermn|77767|ermin, ERM-like protein	AK136820|Ermn|77767|ermin, ERM-like protein	AK137305|Ermn|77767|ermin, ERM-like protein	AK020733|Ermn|77767|ermin, ERM-like protein	AK220372|Ermn|77767|ermin, ERM-like protein
mm9_v1_chr1_+_136321327_136321456	0.282399	FOXQ1.p2	AK214372|Adipor1|72674|adiponectin receptor 1	AK180261|Adipor1|72674|adiponectin receptor 1
mm9_v1_chr11_-_101087730_101087737	0.280993	FOXQ1.p2	AK154565|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr17_-_91492065_91492142	0.279563	FOXQ1.p2	BC079893|Nrxn1|18189|neurexin I	AK005349|Nrxn1|18189|neurexin I	AK139280|Nrxn1|18189|neurexin I	AK163484|Nrxn1|18189|neurexin I	AK037724|Nrxn1|18189|neurexin I	AB093249|Nrxn1|18189|neurexin I	NM_020252|Nrxn1|18189|neurexin I	NM_177284|Nrxn1|18189|neurexin I	AK137407|Nrxn1|18189|neurexin I
mm9_v1_chr14_-_45838944_45839057	0.278224	FOXQ1.p2	BC052488|Txndc16|70561|thioredoxin domain containing 16	AK017582|Txndc16|70561|thioredoxin domain containing 16	AK034025|Txndc16|70561|thioredoxin domain containing 16
mm9_v1_chr19_-_40588235_40588251	0.27697	FOXQ1.p2	U58883|Sorbs1|20411|sorbin and SH3 domain containing 1	AK035212|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr9_-_56995928_56996111	0.2766	FOXQ1.p2	AK155405|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	AK013322|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC043297|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC034873|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)
mm9_v1_chr8_+_46970860_46970893	0.275255	FOXQ1.p2	AK016447|Pdlim3|53318|PDZ and LIM domain 3	BC070418|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr13_-_58227306_58227430	0.275058	FOXQ1.p2	BC048746|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr11_-_79344055_79344121	0.274963	FOXQ1.p2	AK046407|Evi2a|14017|ecotropic viral integration site 2a	BC038124|Evi2a|14017|ecotropic viral integration site 2a	AK170527|Evi2a|14017|ecotropic viral integration site 2a	AK005353|Evi2a|14017|ecotropic viral integration site 2a	NM_146023|Evi2b|216984|ecotropic viral integration site 2b	NM_001033711|Evi2a|14017|ecotropic viral integration site 2a	NM_010161|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr6_+_38868942_38869113	0.274767	FOXQ1.p2	BC029014|Tbxas1|21391|thromboxane A synthase 1, platelet	NM_011539|Tbxas1|21391|thromboxane A synthase 1, platelet	AK048544|Tbxas1|21391|thromboxane A synthase 1, platelet	AK139479|Tbxas1|21391|thromboxane A synthase 1, platelet	L18868|Tbxas1|21391|thromboxane A synthase 1, platelet
mm9_v1_chr8_-_113426341_113426387	0.274264	FOXQ1.p2	AK140503|Fuk|234730|fucokinase	AK164340|Fuk|234730|fucokinase	AJ297482|Fuk|234730|fucokinase	AJ534942|Fuk|234730|fucokinase	AY223865|Fuk|234730|fucokinase	NM_172283|Fuk|234730|fucokinase	NM_181666|Fuk|234730|fucokinase	AK161763|Fuk|234730|fucokinase
mm9_v1_chr15_-_48623520_48623540	0.272078	FOXQ1.p2	AK140264|Csmd3|239420|CUB and Sushi multiple domains 3	AK163122|Csmd3|239420|CUB and Sushi multiple domains 3	NM_001081391|Csmd3|239420|CUB and Sushi multiple domains 3
mm9_v1_chr9_+_5345475_5345506	0.27104	FOXQ1.p2	AK077256|Casp12|12364|caspase 12	AK080045|Casp12|12364|caspase 12	NM_009808|Casp12|12364|caspase 12	AK046681|Casp12|12364|caspase 12	BC028979|Casp12|12364|caspase 12	AK161525|Casp12|12364|caspase 12	AK053407|Casp12|12364|caspase 12	AK030309|Casp12|12364|caspase 12	AY675223|Casp12|12364|caspase 12	AY675224|Casp12|12364|caspase 12
mm9_v1_chr7_-_52754120_52754139	0.270488	FOXQ1.p2	AK194015|Nucb1|18220|nucleobindin 1
mm9_v1_chr2_+_84574217_84574360	0.27047	FOXQ1.p2	AB098743|Ypel4|241525|yippee-like 4 (Drosophila)	NM_001005342|Ypel4|241525|yippee-like 4 (Drosophila)
mm9_v1_chr4_+_8534378_8534506	0.270381	FOXQ1.p2	AK216326|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr2_-_131000485_131000584	0.270001	FOXQ1.p2	BC006046|Spef1|70997|sperm flagellar 1	AK047675|Spef1|70997|sperm flagellar 1	NM_027641|Spef1|70997|sperm flagellar 1	AY860964|Spef1|70997|sperm flagellar 1	AK016476|Spef1|70997|sperm flagellar 1
mm9_v1_chrX_+_109714134_109714134	0.269883	FOXQ1.p2	AK038956|Zfp711|245595|zinc finger protein 711	NM_177747|Zfp711|245595|zinc finger protein 711
mm9_v1_chr15_-_38770160_38770167	0.26646	FOXQ1.p2	
mm9_v1_chr11_-_116711807_116712035	0.265849	FOXQ1.p2	AK211203|Srsf2|20382|serine/arginine-rich splicing factor 2	AK207032|Srsf2|20382|serine/arginine-rich splicing factor 2	AK212169|Srsf2|20382|serine/arginine-rich splicing factor 2	AK220014|Srsf2|20382|serine/arginine-rich splicing factor 2	AF250134|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr2_+_5766079_5766079	0.263926	FOXQ1.p2	AK088222|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5	NM_016918|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5
mm9_v1_chr1_+_51345952_51345993	0.261504	FOXQ1.p2	AK035324|Sdpr|20324|serum deprivation response	BC027005|Sdpr|20324|serum deprivation response	NM_138741|Sdpr|20324|serum deprivation response	AK132324|Sdpr|20324|serum deprivation response
mm9_v1_chr9_-_75531734_75531890	0.261197	FOXQ1.p2	AK158315|Scg3|20255|secretogranin III	AK133655|Scg3|20255|secretogranin III	AK139140|Scg3|20255|secretogranin III	AK164089|Scg3|20255|secretogranin III	BC024785|Scg3|20255|secretogranin III	U02982|Scg3|20255|secretogranin III	AK148498|Scg3|20255|secretogranin III	NM_001164790|Scg3|20255|secretogranin III	NM_009130|Scg3|20255|secretogranin III
mm9_v1_chr18_+_56899574_56899584	0.260696	FOXQ1.p2	
mm9_v1_chr2_-_24618566_24618692	0.258292	FOXQ1.p2	AF042317|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_001042528|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_007579|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	U04999|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm9_v1_chr14_-_31981780_31981787	0.258154	FOXQ1.p2	AK149309|Stab1|192187|stabilin 1	AK159416|Stab1|192187|stabilin 1
mm9_v1_chr5_-_149862867_149863025	0.257728	FOXQ1.p2	BC110667|Hmgb1|15289|high mobility group box 1	AK037928|Hmgb1|15289|high mobility group box 1
mm9_v1_chr6_+_129483295_129483425	0.256201	FOXQ1.p2	AK006103|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK014083|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK015049|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr10_-_90582332_90582452	0.255825	FOXQ1.p2	AK195219|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK212727|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK216642|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK180258|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK188364|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm9_v1_chr11_-_86171026_86171057	0.255346	FOXQ1.p2	NM_001080931|Med13|327987|mediator complex subunit 13
mm9_v1_chr10_-_127188787_127188853	0.255265	FOXQ1.p2	AK031480|Gpr182|11536|G protein-coupled receptor 182	NM_007412|Gpr182|11536|G protein-coupled receptor 182
mm9_v1_chr7_-_97052120_97052138	0.254501	FOXQ1.p2	AK014876|Ccdc81|70884|coiled-coil domain containing 81	BC127049|Ccdc81|70884|coiled-coil domain containing 81	BC152307|Ccdc81|70884|coiled-coil domain containing 81	BC152308|Ccdc81|70884|coiled-coil domain containing 81	AK029544|Ccdc81|70884|coiled-coil domain containing 81	NM_001162979|Ccdc81|70884|coiled-coil domain containing 81
mm9_v1_chr5_-_147032490_147032561	0.254276	FOXQ1.p2	AK017576|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK029912|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK150269|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK152106|Rnf6|74132|ring finger protein (C3H2C3 type) 6
mm9_v1_chr4_-_11131570_11131684	0.253892	FOXQ1.p2	AK050920|Ints8|72656|integrator complex subunit 8
mm9_v1_chr13_+_51245730_51245816	0.248901	FOXQ1.p2	
mm9_v1_chr1_+_140864297_140864301	0.248511	FOXQ1.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr12_-_32893074_32893513	0.24821	FOXQ1.p2	BC051246|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137620|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146201|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AJ249280|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_020272|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137470|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK040543|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK132553|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146200|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide
mm9_v1_chr15_-_58614642_58614788	0.247491	FOXQ1.p2	AK011623|Tmem65|74868|transmembrane protein 65
mm9_v1_chr1_-_64167818_64167853	0.246793	FOXQ1.p2	AF327568|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr2_+_67955769_67955862	0.245521	FOXQ1.p2	NM_020283|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC094660|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132246|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132528|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm9_v1_chr1_+_45401303_45401332	0.244721	FOXQ1.p2	AK159868|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr15_-_77137015_77137087	0.244583	FOXQ1.p2	BC027263|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr2_-_163462584_163462669	0.244455	FOXQ1.p2	AK128955|Serinc3|26943|serine incorporator 3
mm9_v1_chr3_-_97628441_97628543	0.243929	FOXQ1.p2	AK031066|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	NM_001110163|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr11_-_45758413_45758456	0.243426	FOXQ1.p2	AF514309|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11	BC094286|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11	AK143661|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11	AK082292|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11	NM_028185|Lsm11|72290|U7 snRNP-specific Sm-like protein LSM11
mm9_v1_chr16_-_94509462_94509462	0.242214	FOXQ1.p2	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr16_+_5884885_5884885	0.241379	FOXQ1.p2	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr2_+_76244578_76244594	0.241106	FOXQ1.p2	AK044411|Osbpl6|99031|oxysterol binding protein-like 6	NM_145525|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr8_-_18741546_18741552	0.240211	FOXQ1.p2	AK143974|Angpt2|11601|angiopoietin 2	AK019860|Angpt2|11601|angiopoietin 2	NM_007426|Angpt2|11601|angiopoietin 2
mm9_v1_chr16_+_44394895_44394931	0.238378	FOXQ1.p2	BC100518|Wdr52|212517|WD repeat domain 52	NM_001033247|Wdr52|212517|WD repeat domain 52	BC050980|Wdr52|212517|WD repeat domain 52
mm9_v1_chr15_-_3253525_3253525	0.238222	FOXQ1.p2	NM_001166063|Ccdc152|100039139|coiled-coil domain containing 152
mm9_v1_chr15_+_99984826_99984839	0.236497	FOXQ1.p2	AK030064|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_172819|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	BC137857|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	BC137858|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm9_v1_chr18_+_69753146_69753168	0.236368	FOXQ1.p2	AK151433|Tcf4|21413|transcription factor 4
mm9_v1_chr2_+_91570249_91570297	0.236064	FOXQ1.p2	NM_001080754|Ambra1|228361|autophagy/beclin 1 regulator 1	NM_172669|Ambra1|228361|autophagy/beclin 1 regulator 1
mm9_v1_chr4_+_101180625_101180708	0.234518	FOXQ1.p2	AK147570|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK147637|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr7_+_18398030_18398100	0.232725	FOXQ1.p2	AK005390|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005482|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005509|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005533|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	NM_025957|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	BC099412|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14
mm9_v1_chr19_+_46697882_46697901	0.232428	FOXQ1.p2	AK078491|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK142695|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	NM_001177813|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK052400|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed
mm9_v1_chr5_+_20692068_20692169	0.230472	FOXQ1.p2	AK137494|Pion|212167|pigeon homolog (Drosophila)	BC043137|Pion|212167|pigeon homolog (Drosophila)	BC059054|Pion|212167|pigeon homolog (Drosophila)	NM_175437|Pion|212167|pigeon homolog (Drosophila)	AK033694|Pion|212167|pigeon homolog (Drosophila)	AK039306|Pion|212167|pigeon homolog (Drosophila)	AK080244|Pion|212167|pigeon homolog (Drosophila)	AK170515|Pion|212167|pigeon homolog (Drosophila)	BC022737|Pion|212167|pigeon homolog (Drosophila)	BC144952|Pion|212167|pigeon homolog (Drosophila)	BC144953|Pion|212167|pigeon homolog (Drosophila)
mm9_v1_chr5_+_32780438_32780530	0.227911	FOXQ1.p2	AK198041|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK202060|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK217081|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK214320|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr6_+_39542563_39542611	0.225821	FOXQ1.p2	AK028334|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	AK010642|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	AK019008|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	NM_026612|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	BC013510|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	AK007495|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2
mm9_v1_chrX_+_7274259_7274353	0.223378	FOXQ1.p2	NM_173747|Gpkow|209416|G patch domain and KOW motifs	AK017864|Gpkow|209416|G patch domain and KOW motifs	AK144167|Gpkow|209416|G patch domain and KOW motifs	AK028433|Gpkow|209416|G patch domain and KOW motifs	BC092224|Gpkow|209416|G patch domain and KOW motifs
mm9_v1_chr7_-_4796261_4796301	0.222653	FOXQ1.p2	NM_172737|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr6_+_48689045_48689097	0.222644	FOXQ1.p2	NM_008376|Gimap1|16205|GTPase, IMAP family member 1	NM_175860|Gimap1|16205|GTPase, IMAP family member 1	AK156732|Gimap1|16205|GTPase, IMAP family member 1	BC132601|Gimap1|16205|GTPase, IMAP family member 1	BC132603|Gimap1|16205|GTPase, IMAP family member 1	AK169133|Gimap1|16205|GTPase, IMAP family member 1
mm9_v1_chr19_+_3935169_3935313	0.222286	FOXQ1.p2	NM_001161428|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	NM_019449|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	BC018388|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK030488|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK039526|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK165060|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK155556|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK162535|Unc93b1|54445|unc-93 homolog B1 (C. elegans)
mm9_v1_chr11_-_79343891_79344047	0.221947	FOXQ1.p2	AK171332|Evi2a|14017|ecotropic viral integration site 2a	AK044098|Evi2a|14017|ecotropic viral integration site 2a	AK162958|Evi2a|14017|ecotropic viral integration site 2a	AK171594|Evi2a|14017|ecotropic viral integration site 2a	AK160302|Evi2a|14017|ecotropic viral integration site 2a	M34896|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr6_-_51419893_51420010	0.22175	FOXQ1.p2	AK139427|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr13_-_54652983_54653158	0.221529	FOXQ1.p2	AK216925|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK206564|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK215484|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK216083|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK218676|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene
mm9_v1_chr9_+_106091656_106091698	0.221068	FOXQ1.p2	BC054453|Wdr82|77305|WD repeat domain containing 82	BC112907|Wdr82|77305|WD repeat domain containing 82	BC044669|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr9_-_59988919_59989026	0.219717	FOXQ1.p2	BC139329|Thsd4|207596|thrombospondin, type I, domain containing 4	AK045414|Thsd4|207596|thrombospondin, type I, domain containing 4	NM_172444|Thsd4|207596|thrombospondin, type I, domain containing 4
mm9_v1_chr4_+_139178924_139178962	0.219537	FOXQ1.p2	BC056226|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr4_-_106136553_106136700	0.219223	FOXQ1.p2	AY273821|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9
mm9_v1_chr2_+_126533042_126533178	0.218106	FOXQ1.p2	AK166540|Usp8|84092|ubiquitin specific peptidase 8	BC038123|Usp8|84092|ubiquitin specific peptidase 8	AK129003|Usp8|84092|ubiquitin specific peptidase 8	BC050947|Usp8|84092|ubiquitin specific peptidase 8	BC061465|Usp8|84092|ubiquitin specific peptidase 8	NM_019729|Usp8|84092|ubiquitin specific peptidase 8	BC066126|Usp8|84092|ubiquitin specific peptidase 8	AK134058|Usp8|84092|ubiquitin specific peptidase 8	AK040791|Usp8|84092|ubiquitin specific peptidase 8	AK163469|Usp8|84092|ubiquitin specific peptidase 8	AK122195|Usp8|84092|ubiquitin specific peptidase 8	AK153015|Usp8|84092|ubiquitin specific peptidase 8
mm9_v1_chr4_+_144482979_144483095	0.216914	FOXQ1.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr14_+_55082960_55083081	0.216888	FOXQ1.p2	AK144035|Lrp10|65107|low-density lipoprotein receptor-related protein 10	NM_022993|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK132169|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK170325|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC052378|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC054447|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AB042200|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr5_+_33760994_33761117	0.216341	FOXQ1.p2	AK084585|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene	AK163728|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene
mm9_v1_chr17_+_47027553_47027615	0.216111	FOXQ1.p2	NM_178385|Tbcc|72726|tubulin-specific chaperone C
mm9_v1_chr7_-_112292815_112292822	0.215996	FOXQ1.p2	BC111830|Olfr683|259047|olfactory receptor 683	BC148203|Olfr683|259047|olfactory receptor 683	NM_147045|Olfr683|259047|olfactory receptor 683
mm9_v1_chr10_-_95010006_95010009	0.215126	FOXQ1.p2	AK190818|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK196789|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK201590|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK202794|Nudt4|71207|nudix (nucleoside diphosphate linked moiety X)-type motif 4
mm9_v1_chr1_+_152239957_152239972	0.213917	FOXQ1.p2	AK076012|Tpr|108989|translocated promoter region	NM_133780|Tpr|108989|translocated promoter region
mm9_v1_chr7_-_135034440_135034483	0.213568	FOXQ1.p2	AK220244|Prss53|330657|protease, serine, 53	BC147509|Prss53|330657|protease, serine, 53	BC151010|Prss53|330657|protease, serine, 53	BC151017|Prss53|330657|protease, serine, 53	BC172059|Prss53|330657|protease, serine, 53	NM_001081268|Prss53|330657|protease, serine, 53
mm9_v1_chr11_+_19837169_19837251	0.212238	FOXQ1.p2	
mm9_v1_chr1_+_34364633_34364780	0.211527	FOXQ1.p2	AK009079|Dst|13518|dystonin
mm9_v1_chr10_+_38685309_38685399	0.211071	FOXQ1.p2	AK053234|Lama4|16775|laminin, alpha 4	NM_010681|Lama4|16775|laminin, alpha 4	AK031189|Lama4|16775|laminin, alpha 4	AK087015|Lama4|16775|laminin, alpha 4	AK164903|Lama4|16775|laminin, alpha 4	U69176|Lama4|16775|laminin, alpha 4
mm9_v1_chr17_-_23782209_23782235	0.210926	FOXQ1.p2	BC059059|Mmp25|240047|matrix metallopeptidase 25	AK154458|Mmp25|240047|matrix metallopeptidase 25	NM_001033339|Mmp25|240047|matrix metallopeptidase 25
mm9_v1_chr2_+_91050920_91051054	0.209746	FOXQ1.p2	AK080581|Acp2|11432|acid phosphatase 2, lysosomal
mm9_v1_chr5_-_143666425_143666452	0.209319	FOXQ1.p2	
mm9_v1_chr10_-_126532862_126532974	0.209144	FOXQ1.p2	
mm9_v1_chr1_+_36568707_36568722	0.208684	FOXQ1.p2	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr17_-_66234633_66234667	0.208223	FOXQ1.p2	AK145387|Ralbp1|19765|ralA binding protein 1	BC028516|Ralbp1|19765|ralA binding protein 1	AK133613|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr3_+_89222501_89222609	0.207659	FOXQ1.p2	AK049357|Shc1|20416|src homology 2 domain-containing transforming protein C1	BC036172|Shc1|20416|src homology 2 domain-containing transforming protein C1	U15784|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr5_-_92483744_92484066	0.205866	FOXQ1.p2	AK169571|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK220349|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr2_+_148515898_148515954	0.205588	FOXQ1.p2	AK208985|Gzf1|74533|GDNF-inducible zinc finger protein 1
mm9_v1_chr2_-_131855937_131856045	0.204931	FOXQ1.p2	AK172906|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr11_-_102017662_102017746	0.204724	FOXQ1.p2	AK012106|Tmem101|76547|transmembrane protein 101	AK041154|Tmem101|76547|transmembrane protein 101	BC011109|Tmem101|76547|transmembrane protein 101	AK049378|Tmem101|76547|transmembrane protein 101	AK140260|Tmem101|76547|transmembrane protein 101	NM_029649|Tmem101|76547|transmembrane protein 101
mm9_v1_chr6_-_93628981_93629110	0.203399	FOXQ1.p2	AF027505|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK081387|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr3_+_27081918_27081998	0.202754	FOXQ1.p2	AK128968|Nceh1|320024|arylacetamide deacetylase-like 1	AK038691|Nceh1|320024|arylacetamide deacetylase-like 1	AK045363|Nceh1|320024|arylacetamide deacetylase-like 1	AK085767|Nceh1|320024|arylacetamide deacetylase-like 1	NM_178772|Nceh1|320024|arylacetamide deacetylase-like 1	AK135837|Nceh1|320024|arylacetamide deacetylase-like 1	BC082569|Nceh1|320024|arylacetamide deacetylase-like 1	AK173158|Nceh1|320024|arylacetamide deacetylase-like 1	AK034339|Nceh1|320024|arylacetamide deacetylase-like 1
mm9_v1_chr4_+_150239183_150239284	0.202165	FOXQ1.p2	AK205245|Errfi1|74155|ERBB receptor feedback inhibitor 1
mm9_v1_chr2_+_180701966_180702005	0.201601	FOXQ1.p2	BC027794|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC016228|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030295|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AJ401461|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC052922|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK089321|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK052985|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK134402|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC059817|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030520|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177706|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr3_+_99689339_99689354	0.201094	FOXQ1.p2	AK029691|Spag17|74362|sperm associated antigen 17	NM_028892|Spag17|74362|sperm associated antigen 17	AK029947|Spag17|74362|sperm associated antigen 17	AK016477|Spag17|74362|sperm associated antigen 17	AY555275|Spag17|74362|sperm associated antigen 17	AY792594|Spag17|74362|sperm associated antigen 17
mm9_v1_chrX_+_50341236_50341389	0.20014	FOXQ1.p2	NM_013556|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	AK002286|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	AK146626|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	J00423|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	BC004686|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	AK082827|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	AK088114|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase	BC083145|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase
mm9_v1_chr15_+_99532787_99532913	0.200003	FOXQ1.p2	BC026783|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr11_+_119961534_119961626	0.199886	FOXQ1.p2	
mm9_v1_chr2_+_152695336_152695453	0.199131	FOXQ1.p2	AK167030|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK011311|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm9_v1_chr3_+_157610182_157610429	0.198125	FOXQ1.p2	AK135906|Ankrd13c|433667|ankyrin repeat domain 13c	AK157542|Ankrd13c|433667|ankyrin repeat domain 13c	BC065088|Ankrd13c|433667|ankyrin repeat domain 13c	BC138991|Ankrd13c|433667|ankyrin repeat domain 13c	BC138992|Ankrd13c|433667|ankyrin repeat domain 13c	NM_001013806|Ankrd13c|433667|ankyrin repeat domain 13c
mm9_v1_chr11_-_100683830_100683883	0.197045	FOXQ1.p2	AY040231|Stat5b|20851|signal transducer and activator of transcription 5B	AY042906|Stat5b|20851|signal transducer and activator of transcription 5B	AY044901|Stat5b|20851|signal transducer and activator of transcription 5B	AY044902|Stat5b|20851|signal transducer and activator of transcription 5B	AY044903|Stat5b|20851|signal transducer and activator of transcription 5B	U21110|Stat5b|20851|signal transducer and activator of transcription 5B	AK088966|Stat5b|20851|signal transducer and activator of transcription 5B	AK154014|Stat5b|20851|signal transducer and activator of transcription 5B	NM_011489|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr2_-_120346171_120346284	0.194961	FOXQ1.p2	AF060245|Zfp106|20402|zinc finger protein 106	AK029313|Zfp106|20402|zinc finger protein 106
mm9_v1_chr19_-_10557362_10557417	0.193929	FOXQ1.p2	BC118523|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AY032666|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	NM_133689|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK005821|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK016325|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene
mm9_v1_chr10_+_79516232_79516445	0.193906	FOXQ1.p2	D87896|Gpx4|625249|glutathione peroxidase 4	NM_008162|Gpx4|625249|glutathione peroxidase 4	AF045768|Gpx4|625249|glutathione peroxidase 4	AK167881|Gpx4|625249|glutathione peroxidase 4	AK006441|Gpx4|625249|glutathione peroxidase 4	AK160389|Gpx4|625249|glutathione peroxidase 4	AK168027|Gpx4|625249|glutathione peroxidase 4	AF045769|Gpx4|625249|glutathione peroxidase 4	AK160509|Gpx4|625249|glutathione peroxidase 4	BC083137|Gpx4|625249|glutathione peroxidase 4
mm9_v1_chr12_-_101397818_101397862	0.193456	FOXQ1.p2	AK036688|BC002230|217827|cDNA sequence BC002230	AK032800|BC002230|217827|cDNA sequence BC002230	NM_183155|BC002230|217827|cDNA sequence BC002230
mm9_v1_chr8_-_42127242_42127289	0.192945	FOXQ1.p2	AK030510|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005865|Mtus1|102103|mitochondrial tumor suppressor 1	AY626781|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr1_+_95405907_95405920	0.192212	FOXQ1.p2	
mm9_v1_chr6_-_136121885_136121906	0.191607	FOXQ1.p2	AK163195|Grin2b|14812|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm9_v1_chr2_-_155127037_155127091	0.191436	FOXQ1.p2	BC013076|Pigu|228812|phosphatidylinositol glycan anchor biosynthesis, class U
mm9_v1_chr6_+_134870418_134870458	0.190655	FOXQ1.p2	AK047669|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	NM_009875|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK050240|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK158411|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	BC014296|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr17_+_72022598_72022608	0.189936	FOXQ1.p2	NM_177087|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr15_+_32850477_32850629	0.189546	FOXQ1.p2	NM_008304|Sdc2|15529|syndecan 2	U00674|Sdc2|15529|syndecan 2	BC047144|Sdc2|15529|syndecan 2	AK011042|Sdc2|15529|syndecan 2
mm9_v1_chr4_+_97439255_97439362	0.189205	FOXQ1.p2	AK037386|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene	D90174|Nfia|18027|nuclear factor I/A
mm9_v1_chr14_-_73785035_73785066	0.188874	FOXQ1.p2	AK002599|Itm2b|16432|integral membrane protein 2B	AK153103|Itm2b|16432|integral membrane protein 2B	AK159307|Itm2b|16432|integral membrane protein 2B	AK003224|Itm2b|16432|integral membrane protein 2B	BC004731|Itm2b|16432|integral membrane protein 2B	AK003587|Itm2b|16432|integral membrane protein 2B	AK003928|Itm2b|16432|integral membrane protein 2B	AK088270|Itm2b|16432|integral membrane protein 2B	AK159340|Itm2b|16432|integral membrane protein 2B	AK159426|Itm2b|16432|integral membrane protein 2B	AK159628|Itm2b|16432|integral membrane protein 2B	AK159792|Itm2b|16432|integral membrane protein 2B	AK160101|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr19_-_16342088_16342126	0.188315	FOXQ1.p2	
mm9_v1_chr2_+_129442079_129442192	0.188212	FOXQ1.p2	AK195466|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chrX_-_150130711_150130822	0.185138	FOXQ1.p2	AK046557|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK050097|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK046708|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK085035|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	BC064459|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	NM_175429|Kctd12b|207474|potassium channel tetramerisation domain containing 12b
mm9_v1_chr1_-_20793592_20793721	0.184571	FOXQ1.p2	AK219838|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)
mm9_v1_chr9_-_55359898_55360033	0.184004	FOXQ1.p2	BC096645|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	BC003432|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK133525|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK032830|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK168321|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK167572|Etfa|110842|electron transferring flavoprotein, alpha polypeptide
mm9_v1_chr12_+_109926485_109926622	0.183683	FOXQ1.p2	
mm9_v1_chrX_+_138662725_138662809	0.183518	FOXQ1.p2	NM_172782|Nxt2|237082|nuclear transport factor 2-like export factor 2	AK144349|Nxt2|237082|nuclear transport factor 2-like export factor 2	BC064727|Nxt2|237082|nuclear transport factor 2-like export factor 2	AK032102|Nxt2|237082|nuclear transport factor 2-like export factor 2	BC068166|Nxt2|237082|nuclear transport factor 2-like export factor 2	BC118503|Nxt2|237082|nuclear transport factor 2-like export factor 2	BC094570|Nxt2|237082|nuclear transport factor 2-like export factor 2
mm9_v1_chr19_-_8788307_8788398	0.183345	FOXQ1.p2	X14309|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AB023408|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	U25708|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	BC065173|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK090046|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK165550|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK165417|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	NM_008577|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr7_-_72515798_72515900	0.183188	FOXQ1.p2	BC138028|Tjp1|21872|tight junction protein 1	BC145100|Tjp1|21872|tight junction protein 1
mm9_v1_chr5_-_104508289_104508325	0.182262	FOXQ1.p2	AK002996|Sparcl1|13602|SPARC-like 1
mm9_v1_chr9_-_4795830_4795938	0.180208	FOXQ1.p2	AK135034|Gria4|14802|glutamate receptor, ionotropic, AMPA4 (alpha 4)
mm9_v1_chr3_+_89222458_89222496	0.179803	FOXQ1.p2	NM_011368|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr2_-_105228042_105228114	0.179127	FOXQ1.p2	AK213156|Rcn1|19672|reticulocalbin 1
mm9_v1_chr18_-_64664117_64664189	0.178732	FOXQ1.p2	AK193538|Nars|70223|asparaginyl-tRNA synthetase
mm9_v1_chr1_+_154621524_154621665	0.178627	FOXQ1.p2	AK209951|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK205293|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr14_-_58190396_58190409	0.178349	FOXQ1.p2	BC051925|N6amt2|68043|N-6 adenine-specific DNA methyltransferase 2 (putative)	AK005312|N6amt2|68043|N-6 adenine-specific DNA methyltransferase 2 (putative)	AK010911|N6amt2|68043|N-6 adenine-specific DNA methyltransferase 2 (putative)	AK012083|N6amt2|68043|N-6 adenine-specific DNA methyltransferase 2 (putative)	NM_026526|N6amt2|68043|N-6 adenine-specific DNA methyltransferase 2 (putative)
mm9_v1_chr4_-_123395382_123395431	0.177179	FOXQ1.p2	BC002163|BC002163|170658|NADH dehydrogenase Fe-S protein 5 pseudogene	AK152845|Ndufs5|595136|NADH dehydrogenase (ubiquinone) Fe-S protein 5	AK148505|Ndufs5|595136|NADH dehydrogenase (ubiquinone) Fe-S protein 5	NM_001030274|Ndufs5|595136|NADH dehydrogenase (ubiquinone) Fe-S protein 5
mm9_v1_chr8_-_42127124_42127219	0.176996	FOXQ1.p2	AF173380|Mtus1|102103|mitochondrial tumor suppressor 1	AF493235|Mtus1|102103|mitochondrial tumor suppressor 1	AK031693|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr18_+_63137573_63137600	0.175764	FOXQ1.p2	AK164149|Napg|108123|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm9_v1_chr5_+_130535973_130536156	0.175317	FOXQ1.p2	
mm9_v1_chr7_+_86418082_86418112	0.174925	FOXQ1.p2	AK153642|Abhd2|54608|abhydrolase domain containing 2
mm9_v1_chr8_+_23337748_23337837	0.174405	FOXQ1.p2	BC029898|Thsd1|56229|thrombospondin, type I, domain 1	AK049636|Thsd1|56229|thrombospondin, type I, domain 1	BC051957|Thsd1|56229|thrombospondin, type I, domain 1	AK052555|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr3_+_96363312_96363547	0.174232	FOXQ1.p2	AK217452|Txnip|56338|thioredoxin interacting protein	AK219290|Txnip|56338|thioredoxin interacting protein	AK200630|Txnip|56338|thioredoxin interacting protein
mm9_v1_chr1_+_9535477_9535591	0.174004	FOXQ1.p2	AK142041|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	NM_021511|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	BC003481|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AB041589|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK122207|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	BC055925|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK017683|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK010178|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK019913|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK019257|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm9_v1_chr2_-_60589953_60589966	0.173753	FOXQ1.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr6_-_60779848_60779848	0.172917	FOXQ1.p2	AF179273|Snca|20617|synuclein, alpha	NM_009221|Snca|20617|synuclein, alpha
mm9_v1_chr18_+_37607310_37607496	0.172831	FOXQ1.p2	AK032156|Pcdhb14|93885|protocadherin beta 14	NM_053139|Pcdhb14|93885|protocadherin beta 14	AK008662|Pcdhb14|93885|protocadherin beta 14	BC059821|Pcdhb14|93885|protocadherin beta 14	AK083065|Pcdhb14|93885|protocadherin beta 14	AY013775|Pcdhb14|93885|protocadherin beta 14
mm9_v1_chr11_-_69476100_69476163	0.17269	FOXQ1.p2	AK080233|Mpdu1|24070|mannose-P-dolichol utilization defect 1	NM_011900|Mpdu1|24070|mannose-P-dolichol utilization defect 1
mm9_v1_chr7_+_149646740_149646803	0.170802	FOXQ1.p2	BC044736|Lsp1|16985|lymphocyte specific 1	AK003081|Lsp1|16985|lymphocyte specific 1	M89956|Lsp1|16985|lymphocyte specific 1	NM_001136071|Lsp1|16985|lymphocyte specific 1	S74179|Lsp1|16985|lymphocyte specific 1
mm9_v1_chr4_+_134481298_134481299	0.170473	FOXQ1.p2	
mm9_v1_chr14_-_56402855_56402888	0.169192	FOXQ1.p2	AF442771|Adcy4|104110|adenylate cyclase 4	BC015299|Adcy4|104110|adenylate cyclase 4	NM_080435|Adcy4|104110|adenylate cyclase 4	AK161880|Adcy4|104110|adenylate cyclase 4	AK141767|Adcy4|104110|adenylate cyclase 4
mm9_v1_chr4_-_116323979_116324063	0.168889	FOXQ1.p2	AK128906|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK186333|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK192030|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK210646|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK219186|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK009462|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC003850|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr5_+_125365789_125365870	0.168877	FOXQ1.p2	BC096550|Zfp664|269704|zinc finger protein 664
mm9_v1_chr11_-_115948258_115948310	0.168499	FOXQ1.p2	AK079300|Wbp2|22378|WW domain binding protein 2	AK151368|Wbp2|22378|WW domain binding protein 2	AK170317|Wbp2|22378|WW domain binding protein 2	NM_016852|Wbp2|22378|WW domain binding protein 2	U40826|Wbp2|22378|WW domain binding protein 2	AK004824|Wbp2|22378|WW domain binding protein 2	AK146572|Wbp2|22378|WW domain binding protein 2	AK170474|Wbp2|22378|WW domain binding protein 2	BC055058|Wbp2|22378|WW domain binding protein 2
mm9_v1_chr10_+_127669154_127669189	0.167764	FOXQ1.p2	BC058641|Timeless|21853|timeless homolog (Drosophila)	BC082770|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr15_-_58046428_58046480	0.167748	FOXQ1.p2	AK014793|Fbxo32|67731|F-box protein 32	NM_026346|Fbxo32|67731|F-box protein 32	AF441120|Fbxo32|67731|F-box protein 32
mm9_v1_chr3_+_145421621_145421769	0.167476	FOXQ1.p2	AK143507|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1	AK148907|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1	NM_026993|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1	AK010430|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1	BC034505|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1
mm9_v1_chr17_-_65890082_65890121	0.166906	FOXQ1.p2	BC150885|Tmem232|381107|transmembrane protein 232	BC172032|Tmem232|381107|transmembrane protein 232	AF338469|Tmem232|381107|transmembrane protein 232	NM_001008973|Tmem232|381107|transmembrane protein 232
mm9_v1_chr1_+_173053280_173053294	0.166619	FOXQ1.p2	BC061017|1700009P17Rik|75472|RIKEN cDNA 1700009P17 gene
mm9_v1_chr1_+_34347244_34347312	0.166091	FOXQ1.p2	AK037206|Dst|13518|dystonin
mm9_v1_chr1_-_99024782_99024879	0.165423	FOXQ1.p2	BC139066|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	BC139067|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK132668|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK161249|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK016647|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK029505|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	NM_028942|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1
mm9_v1_chr1_-_55283618_55283625	0.164879	FOXQ1.p2	AK012229|Rftn2|74013|raftlin family member 2	AK031158|Rftn2|74013|raftlin family member 2	BC038341|Rftn2|74013|raftlin family member 2	NM_028713|Rftn2|74013|raftlin family member 2
mm9_v1_chr12_-_113749363_113749407	0.16438	FOXQ1.p2	AK047810|Tmem179|104885|transmembrane protein 179	NM_178915|Tmem179|104885|transmembrane protein 179	BC046482|Tmem179|104885|transmembrane protein 179	AK090230|Tmem179|104885|transmembrane protein 179
mm9_v1_chr3_-_107957795_107957821	0.163155	FOXQ1.p2	AK032627|Gpr61|229714|G protein-coupled receptor 61	AK133702|Gpr61|229714|G protein-coupled receptor 61	NM_175470|Gpr61|229714|G protein-coupled receptor 61
mm9_v1_chr14_+_67487686_67487690	0.162868	FOXQ1.p2	AK135012|Gm5464|432870|predicted gene 5464	NM_001034881|Gm5464|432870|predicted gene 5464	BC147346|Gm5464|432870|predicted gene 5464	BC147347|Gm5464|432870|predicted gene 5464
mm9_v1_chr19_+_12040311_12040373	0.161431	FOXQ1.p2	NM_001033174|Osbp|76303|oxysterol binding protein
mm9_v1_chr11_+_75578548_75578573	0.161337	FOXQ1.p2	AK204716|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK199717|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr5_-_31350934_31350934	0.160482	FOXQ1.p2	AK158896|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	NM_001177621|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm9_v1_chr10_+_7309565_7309776	0.160284	FOXQ1.p2	AK048919|Lrp11|237253|low density lipoprotein receptor-related protein 11	NM_172784|Lrp11|237253|low density lipoprotein receptor-related protein 11	AK036676|Lrp11|237253|low density lipoprotein receptor-related protein 11	AK050544|Lrp11|237253|low density lipoprotein receptor-related protein 11	AK031994|Lrp11|237253|low density lipoprotein receptor-related protein 11	BC059874|Lrp11|237253|low density lipoprotein receptor-related protein 11
mm9_v1_chr1_-_64167574_64167617	0.160145	FOXQ1.p2	AB221646|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr4_-_40886191_40886208	0.159911	FOXQ1.p2	AK188292|Bag1|12017|BCL2-associated athanogene 1
mm9_v1_chr6_-_118089060_118089172	0.159744	FOXQ1.p2	AK028045|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK145992|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK160867|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK019496|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	NM_030165|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2
mm9_v1_chr3_+_134970663_134970722	0.159543	FOXQ1.p2	AK029417|Nhedc2|97086|Na+/H+ exchanger domain containing 2	NM_178877|Nhedc2|97086|Na+/H+ exchanger domain containing 2	AK076505|Nhedc2|97086|Na+/H+ exchanger domain containing 2	BC090977|Nhedc2|97086|Na+/H+ exchanger domain containing 2
mm9_v1_chrX_+_20037652_20037652	0.159296	FOXQ1.p2	BC130270|Phf16|382207|PHD finger protein 16	NM_199317|Phf16|382207|PHD finger protein 16
mm9_v1_chr9_-_119977358_119977413	0.158555	FOXQ1.p2	BC012653|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK035902|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK140010|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AF102269|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	NM_009987|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK045634|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK137388|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK044557|Cx3cr1|13051|chemokine (C-X3-C) receptor 1
mm9_v1_chr1_+_87942437_87942543	0.158359	FOXQ1.p2	BC137675|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	BC144821|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144992|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144993|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene
mm9_v1_chr9_-_20933055_20933154	0.156925	FOXQ1.p2	BC053021|Tyk2|54721|tyrosine kinase 2	BC094240|Tyk2|54721|tyrosine kinase 2
mm9_v1_chr17_+_34056585_34056649	0.156856	FOXQ1.p2	AK077299|Tapbp|21356|TAP binding protein	AK151134|Tapbp|21356|TAP binding protein	AK169697|Tapbp|21356|TAP binding protein	AK151878|Tapbp|21356|TAP binding protein	AK152019|Tapbp|21356|TAP binding protein	AK170528|Tapbp|21356|TAP binding protein	AK151807|Tapbp|21356|TAP binding protein	BC015074|Tapbp|21356|TAP binding protein	BC052870|Tapbp|21356|TAP binding protein	AF106278|Tapbp|21356|TAP binding protein	AJ316613|Tapbp|21356|TAP binding protein	AY734471|Tapbp|21356|TAP binding protein	AY734477|Tapbp|21356|TAP binding protein	AY734468|Tapbp|21356|TAP binding protein	AY734469|Tapbp|21356|TAP binding protein
mm9_v1_chr2_+_177876710_177876721	0.156325	FOXQ1.p2	BC058621|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr7_-_29185621_29185738	0.155534	FOXQ1.p2	
mm9_v1_chr1_+_137635977_137636035	0.152919	FOXQ1.p2	CT010278|Csrp1|13007|cysteine and glycine-rich protein 1
mm9_v1_chr17_-_45730551_45730602	0.152861	FOXQ1.p2	BC004828|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr4_+_139179011_139179044	0.152798	FOXQ1.p2	AK044712|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1	BC039281|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr1_+_173612173_173612224	0.152128	FOXQ1.p2	X17501|Cd48|12506|CD48 antigen	X53526|Cd48|12506|CD48 antigen	AK007741|Cd48|12506|CD48 antigen	NM_007649|Cd48|12506|CD48 antigen	AK151601|Cd48|12506|CD48 antigen	AB196820|Cd48|12506|CD48 antigen	AB196821|Cd48|12506|CD48 antigen	AB196822|Cd48|12506|CD48 antigen	AB196823|Cd48|12506|CD48 antigen
mm9_v1_chr13_+_49703402_49703439	0.151962	FOXQ1.p2	AK028300|Ogn|18295|osteoglycin	AK160760|Ogn|18295|osteoglycin	AK053650|Ogn|18295|osteoglycin	NM_008760|Ogn|18295|osteoglycin
mm9_v1_chr1_-_54983132_54983204	0.151129	FOXQ1.p2	AK157584|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr5_-_91069499_91069680	0.150241	FOXQ1.p2	AK005472|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	AK132288|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	NM_028478|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	BC031808|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6
mm9_v1_chr6_-_131197295_131197381	0.150217	FOXQ1.p2	U10304|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	AK017140|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	BC064711|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_001170851|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_008462|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2
mm9_v1_chrX_+_71549202_71549226	0.149203	FOXQ1.p2	
mm9_v1_chr2_-_56976530_56976555	0.14718	FOXQ1.p2	AK087495|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2
mm9_v1_chr11_-_97372344_97372370	0.146338	FOXQ1.p2	AK051643|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr11_-_75841236_75841315	0.146236	FOXQ1.p2	AK171075|Fam101b|76566|family with sequence similarity 101, member B	AK005164|Fam101b|76566|family with sequence similarity 101, member B	NM_029658|Fam101b|76566|family with sequence similarity 101, member B
mm9_v1_chr1_-_36300951_36301026	0.146231	FOXQ1.p2	AK087883|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK144381|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr2_+_154692935_154692951	0.145932	FOXQ1.p2	AK048403|C130057N11Rik|99061|RIKEN cDNA C130057N11 gene
mm9_v1_chr1_-_52874276_52874420	0.145889	FOXQ1.p2	BC025072|Inpp1|16329|inositol polyphosphate-1-phosphatase	U27295|Inpp1|16329|inositol polyphosphate-1-phosphatase	AK078382|Inpp1|16329|inositol polyphosphate-1-phosphatase
mm9_v1_chr9_-_62644026_62644272	0.143709	FOXQ1.p2	AK078303|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK160393|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr5_-_65726802_65726885	0.143701	FOXQ1.p2	U07157|Rfc1|19687|replication factor C (activator 1) 1	X72711|Rfc1|19687|replication factor C (activator 1) 1	BC085174|Rfc1|19687|replication factor C (activator 1) 1	U01222|Rfc1|19687|replication factor C (activator 1) 1	U36441|Rfc1|19687|replication factor C (activator 1) 1	BC085173|Rfc1|19687|replication factor C (activator 1) 1	AK136937|Rfc1|19687|replication factor C (activator 1) 1	AK132028|Rfc1|19687|replication factor C (activator 1) 1	AK146164|Rfc1|19687|replication factor C (activator 1) 1	AK146314|Rfc1|19687|replication factor C (activator 1) 1	NM_011258|Rfc1|19687|replication factor C (activator 1) 1	U15037|Rfc1|19687|replication factor C (activator 1) 1
mm9_v1_chr17_+_88382830_88382866	0.143096	FOXQ1.p2	BC035274|Msh6|17688|mutS homolog 6 (E. coli)
mm9_v1_chr8_+_13172593_13172648	0.142996	FOXQ1.p2	AK178587|Lamp1|16783|lysosomal-associated membrane protein 1	AK182384|Lamp1|16783|lysosomal-associated membrane protein 1	AK183572|Lamp1|16783|lysosomal-associated membrane protein 1	AK186457|Lamp1|16783|lysosomal-associated membrane protein 1	AK191738|Lamp1|16783|lysosomal-associated membrane protein 1	AK208324|Lamp1|16783|lysosomal-associated membrane protein 1	AK214647|Lamp1|16783|lysosomal-associated membrane protein 1	AK219163|Lamp1|16783|lysosomal-associated membrane protein 1	AK180006|Lamp1|16783|lysosomal-associated membrane protein 1
mm9_v1_chr13_-_90229117_90229212	0.142452	FOXQ1.p2	AB055154|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	AK009951|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	AK053612|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	AK088281|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	BC025538|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4	NM_028012|Xrcc4|108138|X-ray repair complementing defective repair in Chinese hamster cells 4
mm9_v1_chr2_-_66248146_66248185	0.141998	FOXQ1.p2	
mm9_v1_chr17_+_70774131_70774133	0.141449	FOXQ1.p2	NM_027712|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	NM_177639|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	BC062120|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr5_-_23012407_23012525	0.141373	FOXQ1.p2	AK044922|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK201776|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chrX_-_156560678_156560850	0.141122	FOXQ1.p2	AL355693|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1
mm9_v1_chr6_-_71582562_71582698	0.140581	FOXQ1.p2	BC059264|Kdm3a|104263|lysine (K)-specific demethylase 3A	AK144825|Kdm3a|104263|lysine (K)-specific demethylase 3A	NM_173001|Kdm3a|104263|lysine (K)-specific demethylase 3A
mm9_v1_chr2_-_84316891_84316933	0.139753	FOXQ1.p2	BC036146|Tfpi|21788|tissue factor pathway inhibitor	NM_001177319|Tfpi|21788|tissue factor pathway inhibitor	AK034752|Tfpi|21788|tissue factor pathway inhibitor	NM_001177320|Tfpi|21788|tissue factor pathway inhibitor
mm9_v1_chr12_-_85791928_85791966	0.13941	FOXQ1.p2	AK128924|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK169915|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171896|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK155814|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK170305|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK082790|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK147146|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171581|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1
mm9_v1_chr10_+_105011586_105011626	0.139163	FOXQ1.p2	AK034146|9330159K06|327812|hypothetical protein 9330159K06
mm9_v1_chr9_-_113562893_113563007	0.139115	FOXQ1.p2	AK035750|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK086540|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK157704|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr7_-_51808828_51809055	0.138819	FOXQ1.p2	BC106148|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	U09419|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2
mm9_v1_chr12_+_112776828_112777065	0.136571	FOXQ1.p2	AK167331|Eif5|217869|eukaryotic translation initiation factor 5
mm9_v1_chr15_-_5058532_5058532	0.13583	FOXQ1.p2	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr19_-_5457470_5457607	0.135425	FOXQ1.p2	BC016659|Ccdc85b|240514|coiled-coil domain containing 85B	BC094592|Ccdc85b|240514|coiled-coil domain containing 85B	BC058411|Ccdc85b|240514|coiled-coil domain containing 85B	NM_198616|Ccdc85b|240514|coiled-coil domain containing 85B
mm9_v1_chr14_+_35147355_35147375	0.135218	FOXQ1.p2	AK219236|Glud1|14661|glutamate dehydrogenase 1
mm9_v1_chr9_-_115152895_115153139	0.134788	FOXQ1.p2	AK213927|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr10_-_116494883_116494953	0.134597	FOXQ1.p2	AK205966|Cct2|12461|chaperonin containing Tcp1, subunit 2 (beta)
mm9_v1_chr17_+_47641999_47642189	0.134185	FOXQ1.p2	NM_001081635|Ccnd3|12445|cyclin D3	NM_001081636|Ccnd3|12445|cyclin D3	AK161758|Ccnd3|12445|cyclin D3	AK083384|Ccnd3|12445|cyclin D3	AK020317|Ccnd3|12445|cyclin D3
mm9_v1_chrX_+_8849905_8850039	0.133946	FOXQ1.p2	AK007734|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	NM_023500|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	AY534248|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125618|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125620|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr15_-_66801093_66801186	0.133875	FOXQ1.p2	BC141246|Ndrg1|17988|N-myc downstream regulated gene 1	BC171968|Ndrg1|17988|N-myc downstream regulated gene 1	BC015282|Ndrg1|17988|N-myc downstream regulated gene 1	U52073|Ndrg1|17988|N-myc downstream regulated gene 1	BC071235|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr7_-_77505248_77505478	0.133444	FOXQ1.p2	X76653|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	U07635|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK140125|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	BC042484|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_009697|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr6_+_122463663_122463700	0.132102	FOXQ1.p2	AK003479|Mfap5|50530|microfibrillar associated protein 5	AF180805|Mfap5|50530|microfibrillar associated protein 5	NM_015776|Mfap5|50530|microfibrillar associated protein 5	BC025131|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr17_-_35183667_35183733	0.131701	FOXQ1.p2	NM_001146215|Msh5|17687|mutS homolog 5 (E. coli)	AF107352|Msh5|17687|mutS homolog 5 (E. coli)	AK042083|Msh5|17687|mutS homolog 5 (E. coli)
mm9_v1_chr11_-_54533036_54533041	0.131612	FOXQ1.p2	
mm9_v1_chr16_-_91069378_91069389	0.131204	FOXQ1.p2	AK035767|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	AK043035|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	AK016554|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	NM_001163695|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	NM_028905|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene
mm9_v1_chr4_-_101028734_101028813	0.130914	FOXQ1.p2	AK021368|E130102H24Rik|77866|RIKEN cDNA E130102H24 gene
mm9_v1_chr4_+_102243132_102243254	0.130314	FOXQ1.p2	AK171700|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK150868|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr17_+_74154180_74154211	0.13023	FOXQ1.p2	AK141265|Ehd3|57440|EH-domain containing 3	NM_020578|Ehd3|57440|EH-domain containing 3	AK128964|Ehd3|57440|EH-domain containing 3	AF155883|Ehd3|57440|EH-domain containing 3
mm9_v1_chr7_+_63185457_63185630	0.130172	FOXQ1.p2	AK195390|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	AK052509|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1
mm9_v1_chr15_+_86025174_86025178	0.129907	FOXQ1.p2	
mm9_v1_chr12_+_111724001_111724119	0.129425	FOXQ1.p2	AB055635|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AB055636|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	U37353|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr7_-_36340918_36340946	0.129386	FOXQ1.p2	BC051553|Nudt19|110959|nudix (nucleoside diphosphate linked moiety X)-type motif 19	NM_033080|Nudt19|110959|nudix (nucleoside diphosphate linked moiety X)-type motif 19
mm9_v1_chr2_-_174252996_174253198	0.128493	FOXQ1.p2	AK182217|Th1l|57314|TH1-like homolog (Drosophila)
mm9_v1_chr12_-_106103285_106103341	0.127857	FOXQ1.p2	AB047978|Clmn|94040|calmin	AB059643|Clmn|94040|calmin	AB059644|Clmn|94040|calmin	AB059645|Clmn|94040|calmin	AB059646|Clmn|94040|calmin	AB059647|Clmn|94040|calmin	AB059648|Clmn|94040|calmin	NM_001040682|Clmn|94040|calmin	NM_053155|Clmn|94040|calmin
mm9_v1_chr6_-_129422702_129422806	0.127744	FOXQ1.p2	AY534909|Clec7a|56644|C-type lectin domain family 7, member a	BC027742|Clec7a|56644|C-type lectin domain family 7, member a	AF262985|Clec7a|56644|C-type lectin domain family 7, member a	NM_020008|Clec7a|56644|C-type lectin domain family 7, member a
mm9_v1_chr6_-_48036471_48036546	0.127347	FOXQ1.p2	
mm9_v1_chr6_-_122560002_122560015	0.127134	FOXQ1.p2	BC103565|Gdf3|14562|growth differentiation factor 3	BC101963|Gdf3|14562|growth differentiation factor 3	BC101964|Gdf3|14562|growth differentiation factor 3	BC101965|Gdf3|14562|growth differentiation factor 3	AK082877|Gdf3|14562|growth differentiation factor 3	AK146174|Gdf3|14562|growth differentiation factor 3	AK167962|Gdf3|14562|growth differentiation factor 3
mm9_v1_chr7_-_106976715_106976926	0.12699	FOXQ1.p2	BC116892|Neu3|50877|neuraminidase 3	BC116924|Neu3|50877|neuraminidase 3	AK050428|Neu3|50877|neuraminidase 3	AK134405|Neu3|50877|neuraminidase 3	AB026842|Neu3|50877|neuraminidase 3	NM_016720|Neu3|50877|neuraminidase 3
mm9_v1_chr13_+_54682957_54683061	0.126983	FOXQ1.p2	AK090305|Arl10|56795|ADP-ribosylation factor-like 10
mm9_v1_chr8_+_94192087_94192089	0.125633	FOXQ1.p2	
mm9_v1_chr5_-_122020680_122020739	0.125402	FOXQ1.p2	AK184586|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK189526|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK188389|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial
mm9_v1_chr11_+_119134231_119134236	0.124936	FOXQ1.p2	AK192147|Gaa|14387|glucosidase, alpha, acid	AK197764|Gaa|14387|glucosidase, alpha, acid	AK210560|Gaa|14387|glucosidase, alpha, acid
mm9_v1_chr8_+_81033220_81033473	0.124651	FOXQ1.p2	NM_029736|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK160402|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK079901|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152752|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152849|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK010834|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK165983|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK040517|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116666|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116717|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825926|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825927|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825928|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm9_v1_chr19_-_40588255_40588287	0.124402	FOXQ1.p2	AK166943|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr17_-_65944300_65944335	0.124361	FOXQ1.p2	AK149040|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr7_+_80520360_80520429	0.123637	FOXQ1.p2	AK082560|Rgma|244058|RGM domain family, member A	BC059072|Rgma|244058|RGM domain family, member A	NM_177740|Rgma|244058|RGM domain family, member A
mm9_v1_chr6_-_87285797_87285814	0.121837	FOXQ1.p2	AK048637|Antxr1|69538|anthrax toxin receptor 1
mm9_v1_chr12_+_25741653_25741728	0.121413	FOXQ1.p2	BC059030|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr7_+_133966816_133966816	0.121036	FOXQ1.p2	AK131642|Fam57b|68952|family with sequence similarity 57, member B	NM_029978|Fam57b|68952|family with sequence similarity 57, member B
mm9_v1_chrX_-_34708836_34708836	0.120767	FOXQ1.p2	AK133120|Akap14|434756|A kinase (PRKA) anchor protein 14	BC147265|Akap14|434756|A kinase (PRKA) anchor protein 14	BC147494|Akap14|434756|A kinase (PRKA) anchor protein 14	NM_001033785|Akap14|434756|A kinase (PRKA) anchor protein 14
mm9_v1_chr2_-_37558794_37558806	0.120263	FOXQ1.p2	BC014710|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr11_+_69435553_69435610	0.119881	FOXQ1.p2	AK011406|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	AK161230|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	BC061227|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	NM_026991|Sat2|69215|spermidine/spermine N1-acetyl transferase 2
mm9_v1_chr9_-_21043659_21043781	0.119512	FOXQ1.p2	AK150437|Keap1|50868|kelch-like ECH-associated protein 1	AK152142|Keap1|50868|kelch-like ECH-associated protein 1	AK004738|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110305|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110306|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110307|Keap1|50868|kelch-like ECH-associated protein 1	NM_016679|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chr17_+_3115197_3115372	0.119226	FOXQ1.p2	AK171078|Scaf8|106583|SR-related CTD-associated factor 8	AK050652|Scaf8|106583|SR-related CTD-associated factor 8	BC038363|Scaf8|106583|SR-related CTD-associated factor 8	AK207242|Scaf8|106583|SR-related CTD-associated factor 8	AK211575|Scaf8|106583|SR-related CTD-associated factor 8	AK213588|Scaf8|106583|SR-related CTD-associated factor 8	AK213688|Scaf8|106583|SR-related CTD-associated factor 8	AK218304|Scaf8|106583|SR-related CTD-associated factor 8	AK215751|Scaf8|106583|SR-related CTD-associated factor 8
mm9_v1_chr9_-_55995361_55995384	0.119038	FOXQ1.p2	AK212256|Tspan3|56434|tetraspanin 3
mm9_v1_chr8_-_122086343_122086607	0.117747	FOXQ1.p2	BC037193|Hsdl1|72552|hydroxysteroid dehydrogenase like 1	BC038480|Hsdl1|72552|hydroxysteroid dehydrogenase like 1	BC058121|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
mm9_v1_chr1_+_74408681_74408737	0.11698	FOXQ1.p2	AK138157|Gm216|241112|predicted gene 216	NM_001033345|Gm216|241112|predicted gene 216
mm9_v1_chr3_+_85888818_85888835	0.11682	FOXQ1.p2	BC028254|Sh3d19|27059|SH3 domain protein D19
mm9_v1_chr18_+_63137605_63137624	0.116793	FOXQ1.p2	AK090379|Napg|108123|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm9_v1_chr9_-_7835107_7835268	0.11608	FOXQ1.p2	BC145985|Birc2|11797|baculoviral IAP repeat-containing 2	NM_007465|Birc2|11797|baculoviral IAP repeat-containing 2	U88909|Birc2|11797|baculoviral IAP repeat-containing 2	BC033480|Birc2|11797|baculoviral IAP repeat-containing 2
mm9_v1_chr1_-_181682859_181682906	0.116068	FOXQ1.p2	AK016646|Ahctf1|226747|AT hook containing transcription factor 1
mm9_v1_chr6_+_121014481_121014613	0.115698	FOXQ1.p2	AK085340|Gm4651|100043793|predicted gene 4651
mm9_v1_chr11_+_50798159_50798204	0.115459	FOXQ1.p2	BC137754|Olfr1377|258913|olfactory receptor 1377	NM_146911|Olfr1377|258913|olfactory receptor 1377
mm9_v1_chrX_+_98877684_98877720	0.115042	FOXQ1.p2	AK041765|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm9_v1_chr15_+_99223377_99223451	0.114631	FOXQ1.p2	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr15_-_76476688_76476767	0.114581	FOXQ1.p2	AK028994|Cyhr1|54151|cysteine and histidine rich 1
mm9_v1_chr2_-_77784222_77784355	0.113764	FOXQ1.p2	BC003993|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	BC099952|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK089988|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK149528|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK051237|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK077961|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK088752|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK166487|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	NM_030560|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK045589|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK143352|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	BC089523|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK132001|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm9_v1_chr16_-_44114803_44114836	0.112976	FOXQ1.p2	AK181657|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A
mm9_v1_chr3_+_79689897_79689949	0.112442	FOXQ1.p2	AF285091|Fam198b|68659|family with sequence similarity 198, member B
mm9_v1_chr17_-_24769539_24769566	0.112116	FOXQ1.p2	AK147487|Tsc2|22084|tuberous sclerosis 2	AK171007|Tsc2|22084|tuberous sclerosis 2	U39818|Tsc2|22084|tuberous sclerosis 2	AK147016|Tsc2|22084|tuberous sclerosis 2	BC052449|Tsc2|22084|tuberous sclerosis 2	BC060701|Tsc2|22084|tuberous sclerosis 2	AK190188|Tsc2|22084|tuberous sclerosis 2	AK170589|Tsc2|22084|tuberous sclerosis 2	AK148062|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr15_+_76406764_76406899	0.111578	FOXQ1.p2	AK039217|Adck5|268822|aarF domain containing kinase 5	NM_172960|Adck5|268822|aarF domain containing kinase 5	BC030881|Adck5|268822|aarF domain containing kinase 5	AK163557|Adck5|268822|aarF domain containing kinase 5	BC060528|Adck5|268822|aarF domain containing kinase 5
mm9_v1_chr3_+_94203140_94203230	0.111058	FOXQ1.p2	AK040952|Lingo4|320747|leucine rich repeat and Ig domain containing 4	NM_177250|Lingo4|320747|leucine rich repeat and Ig domain containing 4	BC117866|Lingo4|320747|leucine rich repeat and Ig domain containing 4	BC117867|Lingo4|320747|leucine rich repeat and Ig domain containing 4
mm9_v1_chr3_+_14886253_14886451	0.110913	FOXQ1.p2	NM_009801|Car2|12349|carbonic anhydrase 2	U37705|Car2|12349|carbonic anhydrase 2
mm9_v1_chr2_-_102741661_102741678	0.109406	FOXQ1.p2	AK045226|Cd44|12505|CD44 antigen
mm9_v1_chr3_-_79541715_79541801	0.109142	FOXQ1.p2	AY509975|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	NM_212452|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	AK137655|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1
mm9_v1_chr14_-_31981750_31981759	0.108899	FOXQ1.p2	AF290914|Stab1|192187|stabilin 1	BC058607|Stab1|192187|stabilin 1
mm9_v1_chr1_+_51346108_51346149	0.108806	FOXQ1.p2	S67386|Sdpr|20324|serum deprivation response	BC020008|Sdpr|20324|serum deprivation response
mm9_v1_chr19_-_24758826_24758856	0.107505	FOXQ1.p2	AK020587|Pgm5|226041|phosphoglucomutase 5
mm9_v1_chr4_+_120550473_120550605	0.107307	FOXQ1.p2	AY326953|Rims3|242662|regulating synaptic membrane exocytosis 3	BC115536|Rims3|242662|regulating synaptic membrane exocytosis 3	NM_182929|Rims3|242662|regulating synaptic membrane exocytosis 3	AK122226|Rims3|242662|regulating synaptic membrane exocytosis 3
mm9_v1_chr13_+_55827167_55827225	0.106827	FOXQ1.p2	AK209800|Txndc15|69672|thioredoxin domain containing 15	AK213704|Txndc15|69672|thioredoxin domain containing 15	AK206830|Txndc15|69672|thioredoxin domain containing 15
mm9_v1_chr10_-_116652417_116652563	0.106643	FOXQ1.p2	AK188062|Yeats4|64050|YEATS domain containing 4
mm9_v1_chr3_-_51081421_51081435	0.10635	FOXQ1.p2	AK088422|Elf2|69257|E74-like factor 2
mm9_v1_chr6_+_142712854_142712889	0.106088	FOXQ1.p2	
mm9_v1_chr15_+_10994444_10994583	0.105459	FOXQ1.p2	AK145096|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK135354|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	NM_175501|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK054015|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK048612|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm9_v1_chr17_-_53678775_53678775	0.104721	FOXQ1.p2	AK076579|4921523A10Rik|110332|RIKEN cDNA 4921523A10 gene	NM_173449|4921523A10Rik|110332|RIKEN cDNA 4921523A10 gene
mm9_v1_chr3_-_146444377_146444386	0.104167	FOXQ1.p2	AK150122|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK150134|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164200|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr9_-_71326295_71326316	0.103971	FOXQ1.p2	
mm9_v1_chr16_+_14705932_14706066	0.103801	FOXQ1.p2	AK133968|Snai2|20583|snail homolog 2 (Drosophila)	BC062164|Snai2|20583|snail homolog 2 (Drosophila)	NM_011415|Snai2|20583|snail homolog 2 (Drosophila)	U79550|Snai2|20583|snail homolog 2 (Drosophila)	U97059|Snai2|20583|snail homolog 2 (Drosophila)
mm9_v1_chr11_-_51414445_51414449	0.103607	FOXQ1.p2	
mm9_v1_chr11_-_106576585_106576603	0.103313	FOXQ1.p2	NM_001032378|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	NM_008816|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr1_-_179178874_179178897	0.102875	FOXQ1.p2	AF124142|Akt3|23797|thymoma viral proto-oncogene 3	BC066861|Akt3|23797|thymoma viral proto-oncogene 3	NM_011785|Akt3|23797|thymoma viral proto-oncogene 3
mm9_v1_chr3_+_136333793_136333805	0.10281	FOXQ1.p2	BC096652|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr18_-_60872888_60873042	0.102736	FOXQ1.p2	AF049894|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AF074926|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC066098|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC079561|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	NM_008306|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr19_+_46227052_46227083	0.10232	FOXQ1.p2	BC082336|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	AK019933|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	BC011335|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr2_+_30006546_30006566	0.102227	FOXQ1.p2	AK011204|Tbc1d13|70296|TBC1 domain family, member 13
mm9_v1_chr14_+_65271350_65271386	0.10209	FOXQ1.p2	AK019919|Kif13b|16554|kinesin family member 13B	NM_001081177|Kif13b|16554|kinesin family member 13B	AK031482|Kif13b|16554|kinesin family member 13B
mm9_v1_chr5_+_9100681_9100767	0.101623	FOXQ1.p2	AK140314|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene	NM_001081029|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene	AK087170|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene
mm9_v1_chr15_+_3230053_3230123	0.101575	FOXQ1.p2	
mm9_v1_chr1_-_72583137_72583137	0.100869	FOXQ1.p2	BC098191|March4|381270|membrane-associated ring finger (C3HC4) 4	NM_001045533|March4|381270|membrane-associated ring finger (C3HC4) 4
mm9_v1_chr3_-_129035406_129035666	0.100612	FOXQ1.p2	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr5_-_29704731_29704866	0.100426	FOXQ1.p2	AF190665|Lmbr1|56873|limb region 1	AF190666|Lmbr1|56873|limb region 1	BC016110|Lmbr1|56873|limb region 1	AK030631|Lmbr1|56873|limb region 1
mm9_v1_chr16_+_44943790_44943885	0.0998371	FOXQ1.p2	NM_001128132|Cd200r3|74603|CD200 receptor 3	NM_001128133|Cd200r3|74603|CD200 receptor 3	NM_027578|Cd200r3|74603|CD200 receptor 3	NM_029018|Cd200r3|74603|CD200 receptor 3	AK040868|Cd200r3|74603|CD200 receptor 3	AK014637|Cd200r3|74603|CD200 receptor 3	AY230199|Cd200r3|74603|CD200 receptor 3	BC106838|Cd200r3|74603|CD200 receptor 3	AK014671|Cd200r3|74603|CD200 receptor 3	AK170363|Cd200r3|74603|CD200 receptor 3	AY703837|Cd200r3|74603|CD200 receptor 3	AY703838|Cd200r3|74603|CD200 receptor 3	AY703839|Cd200r3|74603|CD200 receptor 3	AY703840|Cd200r3|74603|CD200 receptor 3	AY703841|Cd200r3|74603|CD200 receptor 3	AY703842|Cd200r3|74603|CD200 receptor 3
mm9_v1_chr6_+_143156520_143156614	0.0997905	FOXQ1.p2	AK004338|Etnk1|75320|ethanolamine kinase 1
mm9_v1_chr1_-_64167952_64168022	0.0996949	FOXQ1.p2	BC019604|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	NM_033563|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC004700|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC040794|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AF338369|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK149362|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr7_-_51807815_51807956	0.0990714	FOXQ1.p2	
mm9_v1_chr11_+_82988687_82988701	0.0985894	FOXQ1.p2	BC044865|Slfn4|20558|schlafen 4	NM_011410|Slfn4|20558|schlafen 4	AK137559|Slfn4|20558|schlafen 4	AK137689|Slfn4|20558|schlafen 4
mm9_v1_chr5_-_31522802_31522840	0.0978255	FOXQ1.p2	U42383|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
mm9_v1_chr9_+_59526881_59526990	0.0975424	FOXQ1.p2	AK187622|Pkm2|18746|pyruvate kinase, muscle	AK189986|Pkm2|18746|pyruvate kinase, muscle	AK191750|Pkm2|18746|pyruvate kinase, muscle	AK193178|Pkm2|18746|pyruvate kinase, muscle	AK194857|Pkm2|18746|pyruvate kinase, muscle	AK195839|Pkm2|18746|pyruvate kinase, muscle	AK196046|Pkm2|18746|pyruvate kinase, muscle	AK196682|Pkm2|18746|pyruvate kinase, muscle	AK198278|Pkm2|18746|pyruvate kinase, muscle	AK198346|Pkm2|18746|pyruvate kinase, muscle	AK198579|Pkm2|18746|pyruvate kinase, muscle	AK199500|Pkm2|18746|pyruvate kinase, muscle	AK200354|Pkm2|18746|pyruvate kinase, muscle	AK201799|Pkm2|18746|pyruvate kinase, muscle	AK204154|Pkm2|18746|pyruvate kinase, muscle	AK219384|Pkm2|18746|pyruvate kinase, muscle	AK197608|Pkm2|18746|pyruvate kinase, muscle
mm9_v1_chr11_-_51449228_51449289	0.0969594	FOXQ1.p2	BC016075|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chr1_-_82232392_82232507	0.0969281	FOXQ1.p2	AK141842|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr14_+_61757271_61757327	0.0964888	FOXQ1.p2	AK160797|Sacs|50720|sacsin	NM_172809|Sacs|50720|sacsin	AK046501|Sacs|50720|sacsin
mm9_v1_chr16_+_17018484_17018507	0.0963463	FOXQ1.p2	AK193161|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr9_+_60560734_60560795	0.0960629	FOXQ1.p2	BC090615|Larp6|67557|La ribonucleoprotein domain family, member 6
mm9_v1_chr3_-_27610155_27610257	0.0958503	FOXQ1.p2	AK045099|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr8_+_97579002_97579028	0.0957512	FOXQ1.p2	AY352586|Ccdc135|330830|coiled-coil domain containing 135	NM_001042715|Ccdc135|330830|coiled-coil domain containing 135	AK076786|Ccdc135|330830|coiled-coil domain containing 135	BC117982|Ccdc135|330830|coiled-coil domain containing 135	BC117983|Ccdc135|330830|coiled-coil domain containing 135
mm9_v1_chr17_+_56752805_56752873	0.0955181	FOXQ1.p2	NM_018730|Rpl36|54217|ribosomal protein L36	AK003115|Rpl36|54217|ribosomal protein L36	BC086914|Rpl36|54217|ribosomal protein L36	BC021595|Rpl36|54217|ribosomal protein L36	X75895|Rpl36|54217|ribosomal protein L36
mm9_v1_chrX_-_45944937_45944938	0.0948117	FOXQ1.p2	BC051397|Zfp280c|208968|zinc finger protein 280C	NM_001166650|Zfp280c|208968|zinc finger protein 280C	BC028839|Zfp280c|208968|zinc finger protein 280C
mm9_v1_chr18_-_36675393_36675437	0.0944868	FOXQ1.p2	L07264|Hbegf|15200|heparin-binding EGF-like growth factor	AK145548|Hbegf|15200|heparin-binding EGF-like growth factor	AK160575|Hbegf|15200|heparin-binding EGF-like growth factor	BC089607|Hbegf|15200|heparin-binding EGF-like growth factor	AK052084|Hbegf|15200|heparin-binding EGF-like growth factor
mm9_v1_chr1_+_181476534_181476659	0.0937809	FOXQ1.p2	AK146681|Cnst|226744|consortin, connexin sorting protein	AK089290|Cnst|226744|consortin, connexin sorting protein	AK036332|Cnst|226744|consortin, connexin sorting protein	AK040899|Cnst|226744|consortin, connexin sorting protein	AK040666|Cnst|226744|consortin, connexin sorting protein	AK087361|Cnst|226744|consortin, connexin sorting protein	BC054802|Cnst|226744|consortin, connexin sorting protein	NM_146105|Cnst|226744|consortin, connexin sorting protein
mm9_v1_chr19_-_15980575_15980624	0.0937004	FOXQ1.p2	AK191047|Psat1|107272|phosphoserine aminotransferase 1	AK196852|Psat1|107272|phosphoserine aminotransferase 1	AK204592|Psat1|107272|phosphoserine aminotransferase 1
mm9_v1_chr7_-_127038916_127038971	0.0936323	FOXQ1.p2	AK029043|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	NM_173408|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm9_v1_chr11_+_69139759_69139835	0.0929604	FOXQ1.p2	AK049316|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK083134|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	NM_010599|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK046194|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK031806|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK044102|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	BC017518|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3
mm9_v1_chr7_-_29123383_29123453	0.092356	FOXQ1.p2	BC058598|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)
mm9_v1_chr6_-_115570256_115570290	0.0921985	FOXQ1.p2	AB052739|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr2_+_80193710_80193811	0.0907442	FOXQ1.p2	
mm9_v1_chr2_+_112105869_112105981	0.09067	FOXQ1.p2	AK133006|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr14_+_13116681_13116761	0.0906398	FOXQ1.p2	NM_146051|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	NM_178141|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK076182|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC094456|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK089971|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC027421|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene
mm9_v1_chr3_+_27883092_27883235	0.0904322	FOXQ1.p2	NM_008875|Pld1|18805|phospholipase D1	BC068144|Pld1|18805|phospholipase D1
mm9_v1_chr1_-_54983211_54983245	0.0899521	FOXQ1.p2	AK038343|Ankrd44|329154|ankyrin repeat domain 44	NM_001081433|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr4_-_136913576_136913662	0.0898807	FOXQ1.p2	U37720|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167195|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	BC064792|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167400|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168013|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168076|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168089|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168276|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169232|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK144216|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167609|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK003098|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK075567|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK145659|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK154870|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK166281|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK051543|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151726|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168820|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK150563|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168503|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169122|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169805|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151087|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK153564|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168758|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK159470|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	NM_009861|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr3_+_85888355_85888355	0.0898145	FOXQ1.p2	NM_001082414|Sh3d19|27059|SH3 domain protein D19
mm9_v1_chr19_+_45101318_45101473	0.0891495	FOXQ1.p2	AK202462|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK203408|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK205448|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK210216|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215584|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215776|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK217660|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr10_-_61970481_61970509	0.0884883	FOXQ1.p2	BC037076|Srgn|19073|serglycin	J04549|Srgn|19073|serglycin	AK157945|Srgn|19073|serglycin	M34603|Srgn|19073|serglycin	NM_011157|Srgn|19073|serglycin	X16133|Srgn|19073|serglycin	AK168124|Srgn|19073|serglycin	AK151357|Srgn|19073|serglycin
mm9_v1_chr17_-_8020162_8020169	0.0882736	FOXQ1.p2	
mm9_v1_chr10_+_126703317_126703496	0.0882669	FOXQ1.p2	NM_001190453|Dctn2|69654|dynactin 2	NM_001190454|Dctn2|69654|dynactin 2	NM_027151|Dctn2|69654|dynactin 2	AK081785|Dctn2|69654|dynactin 2	AK054390|Dctn2|69654|dynactin 2	AK164021|Dctn2|69654|dynactin 2	AK144464|Dctn2|69654|dynactin 2	AK144505|Dctn2|69654|dynactin 2	BC004613|Dctn2|69654|dynactin 2
mm9_v1_chr11_+_68859125_68859285	0.08765	FOXQ1.p2	NM_011496|Aurkb|20877|aurora kinase B	AK132006|Aurkb|20877|aurora kinase B	BC003261|Aurkb|20877|aurora kinase B	AK075951|Aurkb|20877|aurora kinase B	U69107|Aurkb|20877|aurora kinase B	AK191945|Aurkb|20877|aurora kinase B
mm9_v1_chr11_-_106576380_106576409	0.0876273	FOXQ1.p2	BC085502|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr6_+_30758582_30758676	0.0873741	FOXQ1.p2	AK014219|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr11_+_97702591_97702632	0.0867659	FOXQ1.p2	AK081899|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK140210|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK042827|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK031146|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK035650|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK018341|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK080808|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK082773|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene
mm9_v1_chrX_-_71638317_71638612	0.086252	FOXQ1.p2	BC011237|Fam3a|66294|family with sequence similarity 3, member A	AK007715|Fam3a|66294|family with sequence similarity 3, member A	NM_025473|Fam3a|66294|family with sequence similarity 3, member A	BC019752|Fam3a|66294|family with sequence similarity 3, member A	BC069871|Fam3a|66294|family with sequence similarity 3, member A
mm9_v1_chr12_-_110098804_110098955	0.0859463	FOXQ1.p2	AK185973|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr6_-_112646587_112646665	0.0857333	FOXQ1.p2	AF205278|Rad18|58186|RAD18 homolog (S. cerevisiae)	BC011120|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK048975|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK028505|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK012795|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK030043|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_001167730|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_021385|Rad18|58186|RAD18 homolog (S. cerevisiae)
mm9_v1_chr6_+_73221007_73221091	0.0857021	FOXQ1.p2	AK204482|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr7_+_25682507_25682533	0.0855525	FOXQ1.p2	AK143605|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)	NM_007655|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)	X13450|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)	BC027633|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)
mm9_v1_chr2_+_164312376_164312376	0.0854766	FOXQ1.p2	AK003735|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2	NM_001048228|Dbndd2|52840|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm9_v1_chr5_+_135845811_135845865	0.0854412	FOXQ1.p2	AK079400|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	NM_145414|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AK156651|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AF412029|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AK149521|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5
mm9_v1_chr10_+_92951804_92951841	0.0852707	FOXQ1.p2	AK028963|Hal|15109|histidine ammonia lyase	AK081409|Hal|15109|histidine ammonia lyase	BC057637|Hal|15109|histidine ammonia lyase	L07645|Hal|15109|histidine ammonia lyase
mm9_v1_chr2_+_169459145_169459258	0.0850093	FOXQ1.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr15_-_98593505_98593647	0.0849684	FOXQ1.p2	D87900|Arf3|11842|ADP-ribosylation factor 3	BC014778|Arf3|11842|ADP-ribosylation factor 3	NM_007478|Arf3|11842|ADP-ribosylation factor 3	AK171354|Arf3|11842|ADP-ribosylation factor 3	BC024935|Arf3|11842|ADP-ribosylation factor 3	AK154948|Arf3|11842|ADP-ribosylation factor 3	AK165176|Arf3|11842|ADP-ribosylation factor 3	AK151296|Arf3|11842|ADP-ribosylation factor 3
mm9_v1_chr2_+_152139317_152139577	0.0848119	FOXQ1.p2	AK192023|Tbc1d20|67231|TBC1 domain family, member 20	AK194089|Tbc1d20|67231|TBC1 domain family, member 20	AK199107|Tbc1d20|67231|TBC1 domain family, member 20	AK202139|Tbc1d20|67231|TBC1 domain family, member 20	AK212404|Tbc1d20|67231|TBC1 domain family, member 20	AK213499|Tbc1d20|67231|TBC1 domain family, member 20	AK219611|Tbc1d20|67231|TBC1 domain family, member 20
mm9_v1_chr9_+_110558996_110559065	0.0846857	FOXQ1.p2	AK012610|Ccdc12|72654|coiled-coil domain containing 12	NM_028312|Ccdc12|72654|coiled-coil domain containing 12	BC026668|Ccdc12|72654|coiled-coil domain containing 12
mm9_v1_chr19_-_24299389_24299452	0.0846225	FOXQ1.p2	AK028494|Tjp2|21873|tight junction protein 2
mm9_v1_chr15_+_99543952_99544029	0.0843629	FOXQ1.p2	AK190322|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr6_-_39369941_39369948	0.0838439	FOXQ1.p2	AK005137|Mkrn1|54484|makorin, ring finger protein, 1
mm9_v1_chr2_+_154439056_154439103	0.083778	FOXQ1.p2	AK089176|Zfp341|228807|zinc finger protein 341	BC057098|Zfp341|228807|zinc finger protein 341	NM_199304|Zfp341|228807|zinc finger protein 341
mm9_v1_chr11_+_100931369_100931476	0.083311	FOXQ1.p2	AK143546|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	NM_013792|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK170758|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK158045|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK164125|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	BC055733|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	U85247|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm9_v1_chr14_-_52533114_52533162	0.0829829	FOXQ1.p2	NM_001145959|Ndrg2|29811|N-myc downstream regulated gene 2	NM_013864|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr14_-_94287950_94288026	0.0826977	FOXQ1.p2	NM_001081377|Pcdh9|211712|protocadherin 9	BC157952|Pcdh9|211712|protocadherin 9	BC172098|Pcdh9|211712|protocadherin 9	BC158114|Pcdh9|211712|protocadherin 9	BC158117|Pcdh9|211712|protocadherin 9
mm9_v1_chr3_+_136333251_136333262	0.0821342	FOXQ1.p2	AK166287|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr11_-_106163120_106163178	0.0818831	FOXQ1.p2	AK019956|Gh|14599|growth hormone	AK019952|Gh|14599|growth hormone	AK019954|Gh|14599|growth hormone	AK019959|Gh|14599|growth hormone	AK019961|Gh|14599|growth hormone	AK030715|Gh|14599|growth hormone	BC061157|Gh|14599|growth hormone	NM_008117|Gh|14599|growth hormone	X02891|Gh|14599|growth hormone	AK030419|Gh|14599|growth hormone
mm9_v1_chr10_-_126959397_126959444	0.0818063	FOXQ1.p2	BC051396|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK012355|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK169192|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)
mm9_v1_chr11_-_102152310_102152512	0.0815663	FOXQ1.p2	AK218190|Atxn7l3|217218|ataxin 7-like 3	AK053165|Atxn7l3|217218|ataxin 7-like 3
mm9_v1_chr8_-_122071463_122071711	0.0813703	FOXQ1.p2	AF094820|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	DQ913734|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK210818|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC054837|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr14_-_45839064_45839076	0.0808564	FOXQ1.p2	AK039945|Txndc16|70561|thioredoxin domain containing 16	AK046466|Txndc16|70561|thioredoxin domain containing 16	NM_172597|Txndc16|70561|thioredoxin domain containing 16	BC060101|Txndc16|70561|thioredoxin domain containing 16	AK164111|Txndc16|70561|thioredoxin domain containing 16
mm9_v1_chr6_+_87040212_87040221	0.080655	FOXQ1.p2	AK013141|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr4_-_131481251_131481396	0.0805985	FOXQ1.p2	AK010038|Epb4.1|269587|erythrocyte protein band 4.1	AK213490|Epb4.1|269587|erythrocyte protein band 4.1	AK214122|Epb4.1|269587|erythrocyte protein band 4.1
mm9_v1_chr18_+_56732519_56732526	0.0805856	FOXQ1.p2	NM_019996|Phax|56698|phosphorylated adaptor for RNA export
mm9_v1_chr11_+_44431601_44431727	0.080386	FOXQ1.p2	AK141175|Ebf1|13591|early B-cell factor 1	AK051438|Ebf1|13591|early B-cell factor 1	AK139021|Ebf1|13591|early B-cell factor 1	AK031239|Ebf1|13591|early B-cell factor 1	L12147|Ebf1|13591|early B-cell factor 1	NM_007897|Ebf1|13591|early B-cell factor 1	BC139362|Ebf1|13591|early B-cell factor 1	BC139364|Ebf1|13591|early B-cell factor 1	AK137389|Ebf1|13591|early B-cell factor 1	AK035781|Ebf1|13591|early B-cell factor 1
mm9_v1_chr1_-_74590801_74590859	0.0799832	FOXQ1.p2	BC139091|Usp37|319651|ubiquitin specific peptidase 37	AK133317|Usp37|319651|ubiquitin specific peptidase 37	AK030013|Usp37|319651|ubiquitin specific peptidase 37	NM_176972|Usp37|319651|ubiquitin specific peptidase 37
mm9_v1_chr11_+_49477111_49477127	0.0796854	FOXQ1.p2	AF313456|Scgb3a1|68662|secretoglobin, family 3A, member 1	AF313457|Scgb3a1|68662|secretoglobin, family 3A, member 1	NM_054037|Scgb3a1|68662|secretoglobin, family 3A, member 1	NM_170727|Scgb3a1|68662|secretoglobin, family 3A, member 1	AK003988|Scgb3a1|68662|secretoglobin, family 3A, member 1	BC086910|Scgb3a1|68662|secretoglobin, family 3A, member 1	AF436840|Scgb3a1|68662|secretoglobin, family 3A, member 1
mm9_v1_chr16_-_60605072_60605085	0.0796605	FOXQ1.p2	U58332|Epha6|13840|Eph receptor A6
mm9_v1_chr8_+_67471046_67471202	0.0789042	FOXQ1.p2	AK013998|Tmem192|73067|transmembrane protein 192	NM_001163747|Tmem192|73067|transmembrane protein 192	NM_028427|Tmem192|73067|transmembrane protein 192	AK168146|Tmem192|73067|transmembrane protein 192	AK046181|Tmem192|73067|transmembrane protein 192	AK132619|Tmem192|73067|transmembrane protein 192	BC020157|Tmem192|73067|transmembrane protein 192
mm9_v1_chr2_+_69560861_69560899	0.0788783	FOXQ1.p2	BC016126|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC048905|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr19_-_34329804_34329828	0.0787346	FOXQ1.p2	X13297|Acta2|11475|actin, alpha 2, smooth muscle, aorta	BC064800|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK017374|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK156331|Acta2|11475|actin, alpha 2, smooth muscle, aorta	NM_007392|Acta2|11475|actin, alpha 2, smooth muscle, aorta
mm9_v1_chr2_+_25719373_25719373	0.078731	FOXQ1.p2	FJ628361|Kcnt1|227632|potassium channel, subfamily T, member 1	NM_001145403|Kcnt1|227632|potassium channel, subfamily T, member 1
mm9_v1_chr1_-_99873795_99873812	0.0786083	FOXQ1.p2	BC129869|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr16_+_4940800_4940851	0.0785045	FOXQ1.p2	
mm9_v1_chrX_-_67618136_67618224	0.0775654	FOXQ1.p2	AK166178|Ids|15931|iduronate 2-sulfatase	AK166443|Ids|15931|iduronate 2-sulfatase
mm9_v1_chr3_+_9403021_9403077	0.0768854	FOXQ1.p2	AK039918|C030034L19Rik|320088|RIKEN cDNA C030034L19 gene	AK053975|C030034L19Rik|320088|RIKEN cDNA C030034L19 gene	AK081263|C030034L19Rik|320088|RIKEN cDNA C030034L19 gene	AK030949|C030034L19Rik|320088|RIKEN cDNA C030034L19 gene
mm9_v1_chr17_-_47027336_47027357	0.0761326	FOXQ1.p2	AK039293|A330017A19Rik|442840|RIKEN cDNA A330017A19 gene
mm9_v1_chr16_-_13984713_13984713	0.0761244	FOXQ1.p2	AK017110|Ifitm7|74482|interferon induced transmembrane protein 7	NM_028968|Ifitm7|74482|interferon induced transmembrane protein 7
mm9_v1_chr4_+_144483110_144483188	0.0758078	FOXQ1.p2	AK087137|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr17_+_29797537_29797684	0.0752143	FOXQ1.p2	AK080379|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	NM_028791|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK049190|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK154773|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK042060|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK043733|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK088624|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK150392|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK151194|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152276|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152799|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK153021|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK153066|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	BC024691|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK005044|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152452|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK198101|Ftsjd2|74157|FtsJ methyltransferase domain containing 2
mm9_v1_chr11_-_97857486_97857496	0.0750598	FOXQ1.p2	BC065791|Arl5c|217151|ADP-ribosylation factor-like 5C	NM_207231|Arl5c|217151|ADP-ribosylation factor-like 5C	AK171194|Arl5c|217151|ADP-ribosylation factor-like 5C
mm9_v1_chr19_+_38339167_38339370	0.0744958	FOXQ1.p2	AK045443|Lgi1|56839|leucine-rich repeat LGI family, member 1	BC066090|Lgi1|56839|leucine-rich repeat LGI family, member 1	NM_020278|Lgi1|56839|leucine-rich repeat LGI family, member 1	AF246818|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK035873|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK031996|Lgi1|56839|leucine-rich repeat LGI family, member 1
mm9_v1_chr16_-_87486487_87486518	0.0742371	FOXQ1.p2	AK207150|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)
mm9_v1_chr18_-_56732585_56732592	0.0742243	FOXQ1.p2	NM_001127338|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr14_+_76906602_76906698	0.0741878	FOXQ1.p2	AK186529|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr18_-_39649411_39649429	0.0740439	FOXQ1.p2	BC008154|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr2_+_34287544_34287544	0.0738998	FOXQ1.p2	BC090644|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	NM_177345|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr16_-_36071600_36071716	0.0724651	FOXQ1.p2	AK009946|Fam162a|70186|family with sequence similarity 162, member A	NM_027342|Fam162a|70186|family with sequence similarity 162, member A	BC010826|Fam162a|70186|family with sequence similarity 162, member A	AK033568|Fam162a|70186|family with sequence similarity 162, member A
mm9_v1_chr5_+_21049368_21049436	0.0721327	FOXQ1.p2	AK014767|Lrrc17|74511|leucine rich repeat containing 17	AK018071|Lrrc17|74511|leucine rich repeat containing 17	BC030317|Lrrc17|74511|leucine rich repeat containing 17
mm9_v1_chr2_-_9981155_9981246	0.0715849	FOXQ1.p2	AK187037|Atp5c1|11949|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
mm9_v1_chr1_+_176019168_176019170	0.0710621	FOXQ1.p2	NM_146722|Olfr429|258717|olfactory receptor 429	BC127973|Olfr429|258717|olfactory receptor 429
mm9_v1_chr5_-_139936448_139936481	0.0708353	FOXQ1.p2	BC044867|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene	AK014271|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene	BC058580|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene
mm9_v1_chr15_-_96529121_96529237	0.070516	FOXQ1.p2	AK164568|Slc38a2|67760|solute carrier family 38, member 2	AK018767|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr13_+_40955500_40955723	0.0702405	FOXQ1.p2	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr3_-_88351996_88352227	0.0702316	FOXQ1.p2	AB232620|Rab25|53868|RAB25, member RAS oncogene family	AF119675|Rab25|53868|RAB25, member RAS oncogene family	BC006624|Rab25|53868|RAB25, member RAS oncogene family	AK003260|Rab25|53868|RAB25, member RAS oncogene family	NM_016899|Rab25|53868|RAB25, member RAS oncogene family
mm9_v1_chrX_-_67618235_67618286	0.0701079	FOXQ1.p2	AK132287|Ids|15931|iduronate 2-sulfatase	AK085237|Ids|15931|iduronate 2-sulfatase	AF538870|Ids|15931|iduronate 2-sulfatase	NM_010498|Ids|15931|iduronate 2-sulfatase
mm9_v1_chr4_+_6321713_6321979	0.0701038	FOXQ1.p2	AK213873|Sdcbp|53378|syndecan binding protein
mm9_v1_chr9_+_20016650_20016744	0.0700307	FOXQ1.p2	NM_146903|Olfr871|258905|olfactory receptor 871	BC119201|Olfr871|258905|olfactory receptor 871	BC119203|Olfr871|258905|olfactory receptor 871
mm9_v1_chr10_+_41250456_41250646	0.0697978	FOXQ1.p2	AK217133|Cd164|53599|CD164 antigen	AK135616|Cd164|53599|CD164 antigen
mm9_v1_chr2_-_28438389_28438521	0.0693476	FOXQ1.p2	AK045419|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr10_-_88067758_88067896	0.0691843	FOXQ1.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr19_-_4287408_4287579	0.0689424	FOXQ1.p2	AK153543|Adrbk1|110355|adrenergic receptor kinase, beta 1
mm9_v1_chr13_+_73674194_73674271	0.0687393	FOXQ1.p2	BC054119|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	NM_010020|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK032629|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK136885|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	U16265|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AF109072|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3
mm9_v1_chr3_+_136333670_136333672	0.0686621	FOXQ1.p2	AK150393|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr2_-_79269110_79269144	0.0685335	FOXQ1.p2	BC046474|Cerkl|228094|ceramide kinase-like	NM_001048176|Cerkl|228094|ceramide kinase-like
mm9_v1_chr1_+_75139300_75139429	0.0679653	FOXQ1.p2	AK034667|Fam134a|227298|family with sequence similarity 134, member A	NM_170755|Fam134a|227298|family with sequence similarity 134, member A	AK172093|Fam134a|227298|family with sequence similarity 134, member A	BC070406|Fam134a|227298|family with sequence similarity 134, member A	AK165957|Fam134a|227298|family with sequence similarity 134, member A	AK160400|Fam134a|227298|family with sequence similarity 134, member A
mm9_v1_chr11_-_60013141_60013246	0.0669072	FOXQ1.p2	AK040663|Srebf1|20787|sterol regulatory element binding transcription factor 1
mm9_v1_chr18_+_23573939_23573956	0.0666815	FOXQ1.p2	BC040364|Dtna|13527|dystrobrevin alpha
mm9_v1_chr6_+_100654716_100654748	0.0660969	FOXQ1.p2	BC049816|Gxylt2|232313|glucoside xylosyltransferase 2	NM_198612|Gxylt2|232313|glucoside xylosyltransferase 2	AK144790|Gxylt2|232313|glucoside xylosyltransferase 2
mm9_v1_chr8_+_126547293_126547372	0.0659012	FOXQ1.p2	BC151125|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	NM_001029876|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm9_v1_chr2_-_56976413_56976478	0.0653191	FOXQ1.p2	NM_001139509|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2
mm9_v1_chr8_+_73282270_73282383	0.0650336	FOXQ1.p2	
mm9_v1_chr18_+_44540137_44540241	0.0644506	FOXQ1.p2	AK153105|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	NM_027490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK008609|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK017809|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK166560|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK010490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK152160|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153264|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153310|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)
mm9_v1_chr9_+_121860105_121860137	0.0640406	FOXQ1.p2	AK158406|Fam198a|245050|family with sequence similarity 198, member A	AK139038|Fam198a|245050|family with sequence similarity 198, member A
mm9_v1_chr3_+_105261699_105261733	0.0640009	FOXQ1.p2	BC141097|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	BC141098|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107781|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107782|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	NM_019931|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr14_+_117324518_117324572	0.0639299	FOXQ1.p2	AK164668|Gpc6|23888|glypican 6	AK135442|Gpc6|23888|glypican 6	NM_001079844|Gpc6|23888|glypican 6	NM_011821|Gpc6|23888|glypican 6
mm9_v1_chr13_-_23790310_23790328	0.063765	FOXQ1.p2	BC115451|Hist1h4c|319155|histone cluster 1, H4c	BC115450|Hist1h4c|319155|histone cluster 1, H4c	BC139809|Hist1h4c|319155|histone cluster 1, H4c	NM_178208|Hist1h4c|319155|histone cluster 1, H4c
mm9_v1_chr18_+_37152024_37152120	0.063612	FOXQ1.p2	BC139424|Pcdha8|353235|protocadherin alpha 8	BC139426|Pcdha8|353235|protocadherin alpha 8	AY013766|Pcdha8|353235|protocadherin alpha 8	NM_201243|Pcdha8|353235|protocadherin alpha 8
mm9_v1_chr9_+_13553574_13553628	0.0635102	FOXQ1.p2	AK020065|Mtmr2|77116|myotubularin related protein 2	NM_023858|Mtmr2|77116|myotubularin related protein 2
mm9_v1_chr6_-_113291897_113291906	0.0634243	FOXQ1.p2	AK205870|Camk1|52163|calcium/calmodulin-dependent protein kinase I
mm9_v1_chr18_+_36526187_36526274	0.0626142	FOXQ1.p2	AK003470|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene
mm9_v1_chr9_-_54407862_54407915	0.0622722	FOXQ1.p2	AB016080|Cib2|56506|calcium and integrin binding family member 2	NM_019686|Cib2|56506|calcium and integrin binding family member 2	BC005739|Cib2|56506|calcium and integrin binding family member 2
mm9_v1_chr14_+_45839391_45839393	0.0618692	FOXQ1.p2	AK082691|Gpr137c|70713|G protein-coupled receptor 137C	NM_027518|Gpr137c|70713|G protein-coupled receptor 137C	AK018183|Gpr137c|70713|G protein-coupled receptor 137C
mm9_v1_chr11_+_116295502_116295595	0.0618407	FOXQ1.p2	AK050732|Fam100b|319370|family with sequence similarity 100, member B	BC119080|Fam100b|319370|family with sequence similarity 100, member B	BC116983|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr5_+_73039034_73039056	0.0618235	FOXQ1.p2	AK075654|Nipal1|70701|NIPA-like domain containing 1	NM_001081205|Nipal1|70701|NIPA-like domain containing 1
mm9_v1_chr9_-_21116749_21116776	0.0617221	FOXQ1.p2	AF067146|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK010478|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK082674|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_001110300|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_009678|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit
mm9_v1_chr3_-_88214215_88214225	0.0616016	FOXQ1.p2	BC034333|Pmf1|67037|polyamine-modulated factor 1
mm9_v1_chr18_-_25637786_25637794	0.0605012	FOXQ1.p2	AK078071|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr6_-_137519312_137519326	0.0604229	FOXQ1.p2	AK149683|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chr10_+_77085039_77085135	0.0601763	FOXQ1.p2	AK154464|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AK146554|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	BC010321|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	NM_019803|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AK136365|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AF296657|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AK183367|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2	AK185288|Ube2g2|22213|ubiquitin-conjugating enzyme E2G 2
mm9_v1_chr8_+_73053432_73053453	0.0598059	FOXQ1.p2	AB154247|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr2_-_51790406_51790534	0.0597304	FOXQ1.p2	BC003333|Rbm43|71684|RNA binding motif protein 43	NM_001141981|Rbm43|71684|RNA binding motif protein 43	NM_030243|Rbm43|71684|RNA binding motif protein 43
mm9_v1_chr9_+_20692618_20692740	0.0595834	FOXQ1.p2	NM_145610|Ppan|235036|peter pan homolog (Drosophila)	BC014688|Ppan|235036|peter pan homolog (Drosophila)	AK085695|Ppan|235036|peter pan homolog (Drosophila)	AK039027|Ppan|235036|peter pan homolog (Drosophila)	AK172615|Ppan|235036|peter pan homolog (Drosophila)	AK171672|Ppan|235036|peter pan homolog (Drosophila)	BC059277|Ppan|235036|peter pan homolog (Drosophila)
mm9_v1_chr17_+_34400152_34400289	0.059534	FOXQ1.p2	NM_207105|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK077436|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC008168|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK170370|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171211|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK155573|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171281|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK172409|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK156899|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171005|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171290|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171298|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC010322|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC057998|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M15848|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065913|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119251|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119252|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AY452202|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13537|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13538|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13539|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13540|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M66213|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065912|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13541|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1
mm9_v1_chr6_+_85418280_85418317	0.0592759	FOXQ1.p2	
mm9_v1_chr8_-_27109536_27109553	0.0592543	FOXQ1.p2	
mm9_v1_chr2_-_148701126_148701154	0.059065	FOXQ1.p2	M59470|Cst3|13010|cystatin C	BC002072|Cst3|13010|cystatin C
mm9_v1_chr8_-_114045885_114045888	0.0584148	FOXQ1.p2	AK030644|Wdr59|319481|WD repeat domain 59
mm9_v1_chr17_-_85461840_85461859	0.0580299	FOXQ1.p2	AK019367|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr9_-_113935832_113935880	0.0579072	FOXQ1.p2	AK013142|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK089994|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145665|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145998|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK045742|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC096582|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK141177|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK163472|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK044693|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK039010|Fbxl2|72179|F-box and leucine-rich repeat protein 2	NM_178624|Fbxl2|72179|F-box and leucine-rich repeat protein 2
mm9_v1_chr4_-_19447698_19447753	0.0578663	FOXQ1.p2	BC053980|Cpne3|70568|copine III
mm9_v1_chr5_+_121039024_121039042	0.057697	FOXQ1.p2	AK076996|Iqcd|75732|IQ motif containing D	NM_029408|Iqcd|75732|IQ motif containing D	AK017032|Iqcd|75732|IQ motif containing D	BC125429|Iqcd|75732|IQ motif containing D	BC137644|Iqcd|75732|IQ motif containing D	BC100441|Iqcd|75732|IQ motif containing D
mm9_v1_chr2_+_26775279_26775409	0.056053	FOXQ1.p2	AK215042|Surf2|20931|surfeit gene 2
mm9_v1_chr13_-_54694915_54694970	0.0560494	FOXQ1.p2	AK213322|Cltb|74325|clathrin, light polypeptide (Lcb)
mm9_v1_chr13_+_21404071_21404118	0.0558372	FOXQ1.p2	NM_145451|Gpx6|75512|glutathione peroxidase 6	BC013526|Gpx6|75512|glutathione peroxidase 6
mm9_v1_chr18_-_65553541_65553541	0.0555913	FOXQ1.p2	NM_001037294|Alpk2|225638|alpha-kinase 2
mm9_v1_chr13_+_36209279_36209279	0.0544819	FOXQ1.p2	NM_001039189|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	NM_024274|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr3_-_129525375_129525422	0.0544559	FOXQ1.p2	BC046288|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK044717|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AF012271|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK021379|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	NM_009102|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog
mm9_v1_chrX_-_99700697_99700735	0.0541874	FOXQ1.p2	AK131998|Hdac8|70315|histone deacetylase 8
mm9_v1_chr4_+_32504409_32504501	0.0539067	FOXQ1.p2	NM_001109661|Bach2|12014|BTB and CNC homology 2	BC131642|Bach2|12014|BTB and CNC homology 2
mm9_v1_chr15_-_88953516_88953579	0.0531623	FOXQ1.p2	AK052441|Tubgcp6|328580|tubulin, gamma complex associated protein 6	AK129420|Tubgcp6|328580|tubulin, gamma complex associated protein 6	NM_001163319|Tubgcp6|328580|tubulin, gamma complex associated protein 6
mm9_v1_chr11_-_78020896_78021039	0.0531588	FOXQ1.p2	AK207208|Supt6h|20926|suppressor of Ty 6 homolog (S. cerevisiae)
mm9_v1_chr15_+_91958558_91958558	0.0529999	FOXQ1.p2	NM_007727|Cntn1|12805|contactin 1
mm9_v1_chr10_+_25079603_25079644	0.052892	FOXQ1.p2	AK144088|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr12_+_60114357_60114456	0.0523418	FOXQ1.p2	AK005928|Sip1|66603|survival of motor neuron protein interacting protein 1	AK007515|Sip1|66603|survival of motor neuron protein interacting protein 1	NM_025656|Sip1|66603|survival of motor neuron protein interacting protein 1	AK013414|Sip1|66603|survival of motor neuron protein interacting protein 1	BC053424|Sip1|66603|survival of motor neuron protein interacting protein 1
mm9_v1_chr11_-_106640755_106640876	0.0522548	FOXQ1.p2	AF177202|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC119131|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC144810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK042777|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK041591|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK164730|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK169977|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	NM_015810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit
mm9_v1_chr15_+_78730168_78730275	0.0517358	FOXQ1.p2	AK161215|Sh3bp1|20401|SH3-domain binding protein 1	NM_009164|Sh3bp1|20401|SH3-domain binding protein 1	AK172060|Sh3bp1|20401|SH3-domain binding protein 1	AK166337|Sh3bp1|20401|SH3-domain binding protein 1	AK145156|Sh3bp1|20401|SH3-domain binding protein 1
mm9_v1_chr9_+_72892697_72892708	0.0516907	FOXQ1.p2	AK010373|Rab27a|11891|RAB27A, member RAS oncogene family
mm9_v1_chr2_+_121854287_121854425	0.0514964	FOXQ1.p2	AK148004|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK154934|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK161038|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	NM_144545|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	BC080788|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK147154|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK019219|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J
mm9_v1_chr11_-_79337178_79337240	0.0512734	FOXQ1.p2	AK171686|Evi2b|216984|ecotropic viral integration site 2b	BC017548|Evi2b|216984|ecotropic viral integration site 2b	AK170476|Evi2b|216984|ecotropic viral integration site 2b	AK039968|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr13_-_38085986_38086062	0.0510294	FOXQ1.p2	BC011255|Ssr1|107513|signal sequence receptor, alpha	AK010884|Ssr1|107513|signal sequence receptor, alpha	AK167793|Ssr1|107513|signal sequence receptor, alpha	AK160285|Ssr1|107513|signal sequence receptor, alpha	AF326229|Ssr1|107513|signal sequence receptor, alpha	AF395811|Ssr1|107513|signal sequence receptor, alpha	AY993942|Ssr1|107513|signal sequence receptor, alpha	AK166235|Ssr1|107513|signal sequence receptor, alpha	AK031538|Ssr1|107513|signal sequence receptor, alpha	AB009295|Ssr1|107513|signal sequence receptor, alpha	NM_025965|Ssr1|107513|signal sequence receptor, alpha
mm9_v1_chr4_-_132313025_132313152	0.0509256	FOXQ1.p2	AK166253|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	BC009087|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	NM_133888|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	AK154599|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B
mm9_v1_chr7_-_25873560_25873562	0.0504955	FOXQ1.p2	
mm9_v1_chr11_-_97857184_97857252	0.0498412	FOXQ1.p2	AK154137|Arl5c|217151|ADP-ribosylation factor-like 5C	AK032519|Arl5c|217151|ADP-ribosylation factor-like 5C
mm9_v1_chr18_+_34480612_34480673	0.0490942	FOXQ1.p2	AK137301|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr10_+_51246145_51246210	0.0477911	FOXQ1.p2	
mm9_v1_chr19_-_41068625_41068698	0.047421	FOXQ1.p2	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr2_+_179805287_179805329	0.0473493	FOXQ1.p2	AK163448|Gtpbp5|52856|GTP binding protein 5	AK040689|Gtpbp5|52856|GTP binding protein 5	NM_001083328|Gtpbp5|52856|GTP binding protein 5	NM_001083329|Gtpbp5|52856|GTP binding protein 5	NM_028422|Gtpbp5|52856|GTP binding protein 5	NM_181424|Gtpbp5|52856|GTP binding protein 5	AK013710|Gtpbp5|52856|GTP binding protein 5	BC025144|Gtpbp5|52856|GTP binding protein 5
mm9_v1_chr7_+_16894925_16895103	0.0472291	FOXQ1.p2	NM_133234|Bbc3|170770|BCL2 binding component 3	BC044782|Bbc3|170770|BCL2 binding component 3	AF332560|Bbc3|170770|BCL2 binding component 3	BC060370|Bbc3|170770|BCL2 binding component 3	BC147261|Bbc3|170770|BCL2 binding component 3	BC147262|Bbc3|170770|BCL2 binding component 3
mm9_v1_chr18_-_56722155_56722190	0.0465053	FOXQ1.p2	AK189373|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr4_+_45811944_45812018	0.0460332	FOXQ1.p2	BC020001|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK150992|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK151349|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK151364|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK153416|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK012213|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1
mm9_v1_chr1_-_178143971_178144072	0.0449534	FOXQ1.p2	AK082725|Pld5|319455|phospholipase D family, member 5	NM_001195816|Pld5|319455|phospholipase D family, member 5
mm9_v1_chr3_+_136333733_136333756	0.044847	FOXQ1.p2	J05479|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	NM_008913|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	BC138612|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr2_-_87475901_87475901	0.0448109	FOXQ1.p2	NM_146836|Olfr1132|258833|olfactory receptor 1132
mm9_v1_chr7_-_116073666_116073691	0.0435919	FOXQ1.p2	AK032446|Nlrp10|244202|NLR family, pyrin domain containing 10	BC113194|Nlrp10|244202|NLR family, pyrin domain containing 10	BC113801|Nlrp10|244202|NLR family, pyrin domain containing 10	AK028802|Nlrp10|244202|NLR family, pyrin domain containing 10	NM_175532|Nlrp10|244202|NLR family, pyrin domain containing 10	AK028575|Nlrp10|244202|NLR family, pyrin domain containing 10
mm9_v1_chr18_-_70301202_70301243	0.0435627	FOXQ1.p2	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr19_-_43749304_43749360	0.0434734	FOXQ1.p2	AK155044|Slc25a28|246696|solute carrier family 25, member 28
mm9_v1_chr10_-_6373309_6373324	0.0433636	FOXQ1.p2	BC058265|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm9_v1_chr16_-_32877730_32877851	0.0432434	FOXQ1.p2	AK170312|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene
mm9_v1_chr10_+_57786213_57786415	0.0425127	FOXQ1.p2	AK014954|Lims1|110829|LIM and senescent cell antigen-like domains 1	NM_026148|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK088939|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK153346|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK151235|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK151938|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK152679|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK082932|Lims1|110829|LIM and senescent cell antigen-like domains 1	BC005621|Lims1|110829|LIM and senescent cell antigen-like domains 1	BC067393|Lims1|110829|LIM and senescent cell antigen-like domains 1
mm9_v1_chr18_+_37571327_37571327	0.0424856	FOXQ1.p2	NM_053135|Pcdhb10|93881|protocadherin beta 10
mm9_v1_chr4_+_59016013_59016081	0.0423162	FOXQ1.p2	NM_001033165|Dnajc25|72429|DnaJ (Hsp40) homolog, subfamily C, member 25
mm9_v1_chr13_+_31650192_31650305	0.0422434	FOXQ1.p2	BC047155|Foxq1|15220|forkhead box Q1
mm9_v1_chr12_-_86097486_86097537	0.0420221	FOXQ1.p2	
mm9_v1_chr1_+_24685556_24685610	0.041613	FOXQ1.p2	BC025579|Lmbrd1|68421|LMBR1 domain containing 1	BC031902|Lmbrd1|68421|LMBR1 domain containing 1	AK167080|Lmbrd1|68421|LMBR1 domain containing 1	AK152170|Lmbrd1|68421|LMBR1 domain containing 1	AK153237|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr9_-_57474908_57475111	0.0415123	FOXQ1.p2	AK194012|Csk|12988|c-src tyrosine kinase
mm9_v1_chr7_-_88060541_88060574	0.0414457	FOXQ1.p2	AK184425|Sec11a|56529|SEC11 homolog A (S. cerevisiae)
mm9_v1_chr6_-_3295980_3296101	0.040517	FOXQ1.p2	AK035387|9530028C05|330256|hypothetical protein 9530028C05
mm9_v1_chr19_-_15980291_15980379	0.0404795	FOXQ1.p2	AK191308|Psat1|107272|phosphoserine aminotransferase 1	AK177700|Psat1|107272|phosphoserine aminotransferase 1
mm9_v1_chr13_-_23712946_23712992	0.0398948	FOXQ1.p2	AK049948|Hist1h2be|319179|histone cluster 1, H2be	NM_001177653|Hist1h2be|319179|histone cluster 1, H2be	AK030546|Hist1h2be|319179|histone cluster 1, H2be	NM_178194|Hist1h2be|319179|histone cluster 1, H2be
mm9_v1_chr5_+_104864168_104864178	0.0383006	FOXQ1.p2	AK151069|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr19_+_18745776_18745818	0.0380074	FOXQ1.p2	AK178550|2410127L17Rik|67383|RIKEN cDNA 2410127L17 gene	AK182869|2410127L17Rik|67383|RIKEN cDNA 2410127L17 gene
mm9_v1_chr13_-_54570167_54570211	0.0376825	FOXQ1.p2	BC019603|Thoc3|73666|THO complex 3	AK010668|Thoc3|73666|THO complex 3	NM_028597|Thoc3|73666|THO complex 3
mm9_v1_chr2_-_180396124_180396180	0.0372774	FOXQ1.p2	AK031764|Dido1|23856|death inducer-obliterator 1
mm9_v1_chr15_-_34424900_34424913	0.0372486	FOXQ1.p2	BC125590|Hrsp12|15473|heat-responsive protein 12	BC125592|Hrsp12|15473|heat-responsive protein 12
mm9_v1_chr18_+_50115628_50115725	0.0370898	FOXQ1.p2	AK046910|Dmxl1|240283|Dmx-like 1
mm9_v1_chr5_-_31350374_31350626	0.0369943	FOXQ1.p2	AK161633|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	NM_177870|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	AK088682|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm9_v1_chr11_-_68635236_68635451	0.0357716	FOXQ1.p2	AK194070|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr1_+_97210162_97210393	0.0355124	FOXQ1.p2	BC021428|Fam174a|67698|family with sequence similarity 174, member A	AK084861|Fam174a|67698|family with sequence similarity 174, member A	NM_026321|Fam174a|67698|family with sequence similarity 174, member A	AK009797|Fam174a|67698|family with sequence similarity 174, member A	AK017318|Fam174a|67698|family with sequence similarity 174, member A	AK009892|Fam174a|67698|family with sequence similarity 174, member A	AK020633|Fam174a|67698|family with sequence similarity 174, member A	AK148807|Fam174a|67698|family with sequence similarity 174, member A	AK033948|Fam174a|67698|family with sequence similarity 174, member A	AB154249|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr8_+_34763709_34763709	0.0352637	FOXQ1.p2	BC056357|Gsr|14782|glutathione reductase	BC057325|Gsr|14782|glutathione reductase	NM_010344|Gsr|14782|glutathione reductase
mm9_v1_chr7_+_63305516_63305584	0.0352496	FOXQ1.p2	NM_010418|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr4_-_43666412_43666469	0.0350257	FOXQ1.p2	AK132968|Spag8|433700|sperm associated antigen 8	AY769082|Spag8|433700|sperm associated antigen 8	NM_001007463|Spag8|433700|sperm associated antigen 8	BC150868|Spag8|433700|sperm associated antigen 8
mm9_v1_chr13_+_97158340_97158355	0.0349083	FOXQ1.p2	AK098149|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr1_-_58558259_58558259	0.0347461	FOXQ1.p2	AB190256|Orc2|18393|origin recognition complex, subunit 2	NM_001025378|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr2_+_127429570_127429640	0.0343888	FOXQ1.p2	AK047438|Mrps5|77721|mitochondrial ribosomal protein S5
mm9_v1_chr13_-_74460431_74460546	0.0339849	FOXQ1.p2	
mm9_v1_chr3_-_89824973_89824990	0.0339668	FOXQ1.p2	AK208727|Ubap2l|74383|ubiquitin associated protein 2-like	AK218166|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr12_-_84938095_84938119	0.0336803	FOXQ1.p2	AK170954|Zfyve1|217695|zinc finger, FYVE domain containing 1	NM_183154|Zfyve1|217695|zinc finger, FYVE domain containing 1	AK139825|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr7_-_134005318_134005413	0.0336106	FOXQ1.p2	AK135531|Ino80e|233875|INO80 complex subunit E	BC025527|Ino80e|233875|INO80 complex subunit E	AK040862|Ino80e|233875|INO80 complex subunit E
mm9_v1_chr3_+_66789859_66789903	0.0335842	FOXQ1.p2	BC043045|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chrX_+_131135770_131135834	0.0335724	FOXQ1.p2	AK141861|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK164115|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK168116|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	BC005461|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK169104|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK077716|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	NM_019868|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2
mm9_v1_chr11_+_97258202_97258205	0.0330535	FOXQ1.p2	AK138734|Socs7|192157|suppressor of cytokine signaling 7
mm9_v1_chrX_-_7651692_7651751	0.0328719	FOXQ1.p2	AK169389|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK088405|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AF193861|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AF019969|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK132238|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	BC023860|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)
mm9_v1_chr2_-_163896796_163896916	0.0327917	FOXQ1.p2	BC018278|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK011786|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK168329|Tomm34|67145|translocase of outer mitochondrial membrane 34	NM_025996|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK017699|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK075873|Tomm34|67145|translocase of outer mitochondrial membrane 34
mm9_v1_chr11_-_101321789_101321881	0.0326929	FOXQ1.p2	AK216339|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)
mm9_v1_chr10_+_57718246_57718291	0.0311997	FOXQ1.p2	AK008992|Gcc2|70297|GRIP and coiled-coil domain containing 2	AK011206|Gcc2|70297|GRIP and coiled-coil domain containing 2	AK045701|Gcc2|70297|GRIP and coiled-coil domain containing 2	NM_027375|Gcc2|70297|GRIP and coiled-coil domain containing 2	BC139007|Gcc2|70297|GRIP and coiled-coil domain containing 2	BC145495|Gcc2|70297|GRIP and coiled-coil domain containing 2	BC027339|Gcc2|70297|GRIP and coiled-coil domain containing 2
mm9_v1_chr10_+_127936302_127936454	0.0310755	FOXQ1.p2	AK040027|A430046D13Rik|654440|Riken cDNA A430046D13 gene
mm9_v1_chr18_+_37637421_37637642	0.0305584	FOXQ1.p2	NM_053141|Pcdhb16|93887|protocadherin beta 16	AK030612|Pcdhb16|93887|protocadherin beta 16	AK036829|Pcdhb16|93887|protocadherin beta 16	BC115720|Pcdhb16|93887|protocadherin beta 16	BC116625|Pcdhb16|93887|protocadherin beta 16	AY013777|Pcdhb16|93887|protocadherin beta 16
mm9_v1_chr3_+_33707638_33707720	0.030555	FOXQ1.p2	AK016428|Ttc14|67120|tetratricopeptide repeat domain 14	BC103802|Ttc14|67120|tetratricopeptide repeat domain 14
mm9_v1_chr8_-_95803605_95803656	0.0305146	FOXQ1.p2	BC013479|Ces1f|234564|carboxylesterase 1F	AK136491|Ces1f|234564|carboxylesterase 1F	NM_144930|Ces1f|234564|carboxylesterase 1F
mm9_v1_chr1_+_130140700_130141098	0.0304273	FOXQ1.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr11_+_94426358_94426387	0.0303486	FOXQ1.p2	AK158297|Chad|12643|chondroadherin	NM_007689|Chad|12643|chondroadherin
mm9_v1_chr17_-_27889845_27889920	0.0300462	FOXQ1.p2	AK081219|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	AK082788|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed
mm9_v1_chr7_-_109248742_109248742	0.0293947	FOXQ1.p2	AK132854|Art5|11875|ADP-ribosyltransferase 5	NM_007491|Art5|11875|ADP-ribosyltransferase 5
mm9_v1_chr2_-_131846852_131846920	0.0293034	FOXQ1.p2	AK037601|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr12_-_106103171_106103182	0.0288991	FOXQ1.p2	BC096470|Clmn|94040|calmin
mm9_v1_chr7_+_97177668_97177676	0.0287754	FOXQ1.p2	AK165252|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK157435|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK046045|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene
mm9_v1_chr15_-_76554192_76554281	0.0286207	FOXQ1.p2	AK046662|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	BC026997|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	BC019462|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK053546|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK163615|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK021050|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK165937|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK075645|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK085641|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK140368|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK140578|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	NM_145472|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	NM_176828|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene
mm9_v1_chr11_+_69749297_69749476	0.0284827	FOXQ1.p2	BC141112|Ybx2|53422|Y box protein 2	BC100454|Ybx2|53422|Y box protein 2	NM_016875|Ybx2|53422|Y box protein 2	AK131786|Ybx2|53422|Y box protein 2	AF073954|Ybx2|53422|Y box protein 2
mm9_v1_chr9_+_13553629_13553630	0.0283788	FOXQ1.p2	AK133476|Mtmr2|77116|myotubularin related protein 2
mm9_v1_chr12_-_16596537_16596561	0.028277	FOXQ1.p2	AK141489|Lpin1|14245|lipin 1	AF180471|Lpin1|14245|lipin 1
mm9_v1_chr7_-_97278443_97278523	0.0280754	FOXQ1.p2	AK019082|2310010J17Rik|78329|RIKEN cDNA 2310010J17 gene
mm9_v1_chr8_+_114464651_114464671	0.0279204	FOXQ1.p2	
mm9_v1_chr16_-_26755585_26755590	0.0278055	FOXQ1.p2	
mm9_v1_chr3_+_94217197_94217322	0.0275754	FOXQ1.p2	BC057030|Tdrkh|72634|tudor and KH domain containing protein	BC031886|Tdrkh|72634|tudor and KH domain containing protein	BC049363|Tdrkh|72634|tudor and KH domain containing protein	NM_028307|Tdrkh|72634|tudor and KH domain containing protein
mm9_v1_chr10_+_66559194_66559239	0.0275522	FOXQ1.p2	AK140633|Jmjd1c|108829|jumonji domain containing 1C
mm9_v1_chr1_-_136700389_136700428	0.027433	FOXQ1.p2	AK035285|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm9_v1_chr10_+_23908526_23908598	0.0270817	FOXQ1.p2	AK198523|Stx7|53331|syntaxin 7
mm9_v1_chr2_-_148701203_148701269	0.0257861	FOXQ1.p2	AK002438|Cst3|13010|cystatin C	NM_009976|Cst3|13010|cystatin C	AK014368|Cst3|13010|cystatin C	AK131728|Cst3|13010|cystatin C	AK146333|Cst3|13010|cystatin C
mm9_v1_chr9_+_114632997_114633011	0.0253608	FOXQ1.p2	
mm9_v1_chr14_+_34767188_34767245	0.025147	FOXQ1.p2	BC083133|Rbp3|19661|retinol binding protein 3, interstitial	BC017610|Rbp3|19661|retinol binding protein 3, interstitial	NM_015745|Rbp3|19661|retinol binding protein 3, interstitial	BC040282|Rbp3|19661|retinol binding protein 3, interstitial	BC042480|Rbp3|19661|retinol binding protein 3, interstitial
mm9_v1_chr17_-_36169573_36169660	0.0249932	FOXQ1.p2	AF100699|H2-T23|15040|histocompatibility 2, T region locus 23	AF100700|H2-T23|15040|histocompatibility 2, T region locus 23	AF100702|H2-T23|15040|histocompatibility 2, T region locus 23	AF057279|H2-T23|15040|histocompatibility 2, T region locus 23	AF082510|H2-T23|15040|histocompatibility 2, T region locus 23	BC099472|H2-T23|15040|histocompatibility 2, T region locus 23	AB359230|H2-T23|15040|histocompatibility 2, T region locus 23	AK133502|H2-T23|15040|histocompatibility 2, T region locus 23	M11284|H2-T23|15040|histocompatibility 2, T region locus 23	NM_010398|H2-T23|15040|histocompatibility 2, T region locus 23
mm9_v1_chr8_+_114464639_114464646	0.0234856	FOXQ1.p2	BC026798|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm9_v1_chr18_+_37560490_37560542	0.0234636	FOXQ1.p2	AK032626|Pcdhb9|93880|protocadherin beta 9	NM_053134|Pcdhb9|93880|protocadherin beta 9	BC055319|Pcdhb9|93880|protocadherin beta 9	BC062640|Pcdhb9|93880|protocadherin beta 9
mm9_v1_chr3_+_144260300_144260351	0.0233121	FOXQ1.p2	AK205282|Sep15|93684|selenoprotein	AK213933|Sep15|93684|selenoprotein	AK218207|Sep15|93684|selenoprotein
mm9_v1_chr10_+_85811980_85812061	0.0232892	FOXQ1.p2	Z31358|Timp3|21859|tissue inhibitor of metalloproteinase 3
mm9_v1_chr10_+_86148239_86148360	0.0230843	FOXQ1.p2	AK019015|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK007490|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK017634|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK012122|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK090016|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene
mm9_v1_chr8_+_13705888_13705888	0.0225568	FOXQ1.p2	AK038767|4932443I19Rik|403185|RIKEN cDNA 4932443I19 gene	NM_001101519|4932443I19Rik|403185|RIKEN cDNA 4932443I19 gene
mm9_v1_chr7_-_108080671_108080707	0.0222983	FOXQ1.p2	NM_001081116|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr5_+_124933122_124933232	0.0219203	FOXQ1.p2	AK039064|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	BC043031|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	BC058361|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	NM_029532|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	AK018232|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)
mm9_v1_chr2_-_24647157_24647300	0.0218661	FOXQ1.p2	AK020308|Ehmt1|77683|euchromatic histone methyltransferase 1
mm9_v1_chr11_+_77845840_77845855	0.0215742	FOXQ1.p2	AK011939|Dhrs13|70451|dehydrogenase/reductase (SDR family) member 13	BC115881|Dhrs13|70451|dehydrogenase/reductase (SDR family) member 13	AK046465|Dhrs13|70451|dehydrogenase/reductase (SDR family) member 13
mm9_v1_chr9_+_21229348_21229458	0.0215633	FOXQ1.p2	AK172231|Dnm2|13430|dynamin 2	AK170574|Dnm2|13430|dynamin 2	AK005012|Dnm2|13430|dynamin 2	AK157844|Dnm2|13430|dynamin 2	AK150046|Dnm2|13430|dynamin 2	AK171566|Dnm2|13430|dynamin 2	NM_001039520|Dnm2|13430|dynamin 2	AK171049|Dnm2|13430|dynamin 2	L31398|Dnm2|13430|dynamin 2
mm9_v1_chr10_+_120471255_120471291	0.021081	FOXQ1.p2	BC013268|Wif1|24117|Wnt inhibitory factor 1	AF122923|Wif1|24117|Wnt inhibitory factor 1
mm9_v1_chr16_+_17045284_17045304	0.0207411	FOXQ1.p2	AK018549|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chrX_+_72341436_72341443	0.0206977	FOXQ1.p2	BC068171|Dkc1|245474|dyskeratosis congenita 1, dyskerin homolog (human)	AK167973|Dkc1|245474|dyskeratosis congenita 1, dyskerin homolog (human)
mm9_v1_chr19_-_10752469_10752560	0.0202019	FOXQ1.p2	AF240776|Pga5|58803|pepsinogen 5, group I	AK004109|Pga5|58803|pepsinogen 5, group I	AK168924|Pga5|58803|pepsinogen 5, group I	BC119523|Pga5|58803|pepsinogen 5, group I	AK053965|Pga5|58803|pepsinogen 5, group I	NM_021453|Pga5|58803|pepsinogen 5, group I
mm9_v1_chr10_-_117261663_117261731	0.0200536	FOXQ1.p2	M79314|Rap1b|215449|RAS related protein 1b	BC147700|Rap1b|215449|RAS related protein 1b	BC147713|Rap1b|215449|RAS related protein 1b
mm9_v1_chr4_+_97439119_97439136	0.0198859	FOXQ1.p2	AK161966|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene
mm9_v1_chr3_-_88897207_88897284	0.019531	FOXQ1.p2	AK039664|Rusc1|72296|RUN and SH3 domain containing 1	BC056360|Rusc1|72296|RUN and SH3 domain containing 1	AK042689|Rusc1|72296|RUN and SH3 domain containing 1	NM_001083807|Rusc1|72296|RUN and SH3 domain containing 1	NM_028188|Rusc1|72296|RUN and SH3 domain containing 1
mm9_v1_chr3_-_130951398_130951434	0.019396	FOXQ1.p2	AK169238|Hadh|15107|hydroxyacyl-Coenzyme A dehydrogenase
mm9_v1_chr16_+_59302980_59302980	0.0193925	FOXQ1.p2	BC128025|Olfr203|258479|olfactory receptor 203	NM_146486|Olfr203|258479|olfactory receptor 203
mm9_v1_chr6_+_122871804_122871930	0.0192884	FOXQ1.p2	BC049354|Clec4a1|269799|C-type lectin domain family 4, member a1	NM_199311|Clec4a1|269799|C-type lectin domain family 4, member a1	AY397675|Clec4a1|269799|C-type lectin domain family 4, member a1
mm9_v1_chr1_+_65357830_65357830	0.0191724	FOXQ1.p2	AK045576|Pth2r|213527|parathyroid hormone 2 receptor	NM_139270|Pth2r|213527|parathyroid hormone 2 receptor
mm9_v1_chr4_+_139178802_139178820	0.0191389	FOXQ1.p2	BC060650|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1	NM_175438|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr3_+_67406958_67407063	0.0183832	FOXQ1.p2	AK171855|Mfsd1|66868|major facilitator superfamily domain containing 1
mm9_v1_chr9_-_43921555_43921605	0.0182173	FOXQ1.p2	BC111036|Rnf26|213211|ring finger protein 26	AK157821|Rnf26|213211|ring finger protein 26	AK085078|Rnf26|213211|ring finger protein 26	AK033164|Rnf26|213211|ring finger protein 26
mm9_v1_chr7_-_132635008_132635055	0.0181914	FOXQ1.p2	BC031848|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	BC049558|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	NM_026330|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr6_+_48995303_48995460	0.0181224	FOXQ1.p2	AK179971|Gpnmb|93695|glycoprotein (transmembrane) nmb
mm9_v1_chr6_+_129130632_129130672	0.0173167	FOXQ1.p2	AY320031|Clec2d|93694|C-type lectin domain family 2, member d	AF321553|Clec2d|93694|C-type lectin domain family 2, member d	NM_053109|Clec2d|93694|C-type lectin domain family 2, member d	AF350409|Clec2d|93694|C-type lectin domain family 2, member d	BC106776|Clec2d|93694|C-type lectin domain family 2, member d
mm9_v1_chr6_+_8898613_8898694	0.0170315	FOXQ1.p2	AK083014|Nxph1|18231|neurexophilin 1
mm9_v1_chr14_-_55710878_55710884	0.0170207	FOXQ1.p2	AB190186|Zfhx2|239102|zinc finger homeobox 2	NM_001039198|Zfhx2|239102|zinc finger homeobox 2
mm9_v1_chr7_-_52271450_52271636	0.016864	FOXQ1.p2	BC042576|Scaf1|233208|SR-related CTD-associated factor 1	AK141920|Scaf1|233208|SR-related CTD-associated factor 1	BC085153|Scaf1|233208|SR-related CTD-associated factor 1	NM_001008422|Scaf1|233208|SR-related CTD-associated factor 1	BC079873|Scaf1|233208|SR-related CTD-associated factor 1
mm9_v1_chr3_-_30498769_30498835	0.016514	FOXQ1.p2	AK007208|Arpm1|76652|actin related protein M1	AK047260|Arpm1|76652|actin related protein M1	NM_029690|Arpm1|76652|actin related protein M1	BC107277|Arpm1|76652|actin related protein M1	BC107278|Arpm1|76652|actin related protein M1
mm9_v1_chr5_-_144670646_144670709	0.015763	FOXQ1.p2	BC026958|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024410|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC026972|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024480|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_001172146|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_146165|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
mm9_v1_chr11_-_53242501_53242651	0.0150406	FOXQ1.p2	
mm9_v1_chr11_-_98885428_98885514	0.0149692	FOXQ1.p2	D12513|Top2a|21973|topoisomerase (DNA) II alpha	BC057873|Top2a|21973|topoisomerase (DNA) II alpha	BC008170|Top2a|21973|topoisomerase (DNA) II alpha	NM_011623|Top2a|21973|topoisomerase (DNA) II alpha
mm9_v1_chr5_-_100929644_100929677	0.0146524	FOXQ1.p2	AK220225|Lin54|231506|lin-54 homolog (C. elegans)	AK134320|Lin54|231506|lin-54 homolog (C. elegans)	AK029288|Lin54|231506|lin-54 homolog (C. elegans)	NM_172714|Lin54|231506|lin-54 homolog (C. elegans)
mm9_v1_chr3_+_159158396_159158460	0.0144153	FOXQ1.p2	NM_001172092|Depdc1a|76131|DEP domain containing 1a	NM_001172093|Depdc1a|76131|DEP domain containing 1a	NM_029523|Depdc1a|76131|DEP domain containing 1a	BC023934|Depdc1a|76131|DEP domain containing 1a	AK088719|Depdc1a|76131|DEP domain containing 1a	AK146458|Depdc1a|76131|DEP domain containing 1a	AK050456|Depdc1a|76131|DEP domain containing 1a
mm9_v1_chr10_+_82359714_82359858	0.0143468	FOXQ1.p2	AK007891|Txnrd1|50493|thioredoxin reductase 1	AK202828|Txnrd1|50493|thioredoxin reductase 1	AK204569|Txnrd1|50493|thioredoxin reductase 1	AK217830|Txnrd1|50493|thioredoxin reductase 1	AK194198|Txnrd1|50493|thioredoxin reductase 1	AK203123|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr17_+_34056367_34056478	0.0137794	FOXQ1.p2	NM_001025313|Tapbp|21356|TAP binding protein	NM_009318|Tapbp|21356|TAP binding protein
mm9_v1_chr3_-_117571853_117571885	0.0137196	FOXQ1.p2	AK038971|Snx7|76561|sorting nexin 7	NM_001190156|Snx7|76561|sorting nexin 7	NM_029655|Snx7|76561|sorting nexin 7
mm9_v1_chr1_+_17135421_17135611	0.0131747	FOXQ1.p2	AK149281|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK083814|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	NM_010267|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK045460|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	Y17850|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK020988|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC048177|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC060212|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK049655|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC051135|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK139057|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1
mm9_v1_chr5_-_101103051_101103304	0.0127331	FOXQ1.p2	BC080773|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK009092|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	NM_027978|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)
mm9_v1_chr14_-_60216634_60216802	0.0126723	FOXQ1.p2	AK217714|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	BC006901|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK038926|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK032600|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK009280|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK032813|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK045962|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK039148|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK042494|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168535|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168536|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168537|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168538|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_027986|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1
mm9_v1_chr8_-_98377390_98377440	0.0123227	FOXQ1.p2	AK052548|Slc38a7|234595|solute carrier family 38, member 7	NM_172758|Slc38a7|234595|solute carrier family 38, member 7	AK195271|Slc38a7|234595|solute carrier family 38, member 7	AK171137|Slc38a7|234595|solute carrier family 38, member 7
mm9_v1_chr2_-_102741782_102741821	0.0121355	FOXQ1.p2	NM_001039150|Cd44|12505|CD44 antigen	NM_001039151|Cd44|12505|CD44 antigen	NM_001177785|Cd44|12505|CD44 antigen	NM_001177786|Cd44|12505|CD44 antigen	NM_001177787|Cd44|12505|CD44 antigen	NM_009851|Cd44|12505|CD44 antigen
mm9_v1_chr5_-_114280434_114280521	0.01211	FOXQ1.p2	AK089214|Selplg|20345|selectin, platelet (p-selectin) ligand	AK155762|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156933|Selplg|20345|selectin, platelet (p-selectin) ligand	AK158134|Selplg|20345|selectin, platelet (p-selectin) ligand	BC003874|Selplg|20345|selectin, platelet (p-selectin) ligand	AK172077|Selplg|20345|selectin, platelet (p-selectin) ligand	AK171693|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156551|Selplg|20345|selectin, platelet (p-selectin) ligand	AK089188|Selplg|20345|selectin, platelet (p-selectin) ligand	NM_009151|Selplg|20345|selectin, platelet (p-selectin) ligand
mm9_v1_chr12_-_112907828_112907859	0.011993	FOXQ1.p2	X04591|Ckb|12709|creatine kinase, brain
mm9_v1_chr2_-_152657392_152657404	0.0118553	FOXQ1.p2	AK150028|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr11_+_46268432_46268486	0.0117004	FOXQ1.p2	AK148474|Havcr2|171285|hepatitis A virus cellular receptor 2	NM_134250|Havcr2|171285|hepatitis A virus cellular receptor 2	AF450241|Havcr2|171285|hepatitis A virus cellular receptor 2	AY553334|Havcr2|171285|hepatitis A virus cellular receptor 2	AK170775|Havcr2|171285|hepatitis A virus cellular receptor 2	BC106851|Havcr2|171285|hepatitis A virus cellular receptor 2	BC106852|Havcr2|171285|hepatitis A virus cellular receptor 2	AF399831|Havcr2|171285|hepatitis A virus cellular receptor 2
mm9_v1_chr6_+_87859720_87859763	0.0116984	FOXQ1.p2	AK192006|Copg|54161|coatomer protein complex, subunit gamma	AK196464|Copg|54161|coatomer protein complex, subunit gamma
mm9_v1_chr9_+_95538038_95538059	0.0113168	FOXQ1.p2	AK010249|Pcolce2|76477|procollagen C-endopeptidase enhancer 2	NM_029620|Pcolce2|76477|procollagen C-endopeptidase enhancer 2
mm9_v1_chr6_+_128349783_128350065	0.0112721	FOXQ1.p2	AJ278170|Nrip2|60345|nuclear receptor interacting protein 2	NM_001162858|Nrip2|60345|nuclear receptor interacting protein 2	NM_021717|Nrip2|60345|nuclear receptor interacting protein 2	AK156526|Nrip2|60345|nuclear receptor interacting protein 2	AK134689|Nrip2|60345|nuclear receptor interacting protein 2	BC115523|Nrip2|60345|nuclear receptor interacting protein 2	BC094230|Nrip2|60345|nuclear receptor interacting protein 2
mm9_v1_chr1_+_75432496_75432530	0.0110269	FOXQ1.p2	NM_133708|Gmppa|69080|GDP-mannose pyrophosphorylase A	AK007463|Gmppa|69080|GDP-mannose pyrophosphorylase A
mm9_v1_chr15_+_97077537_97077537	0.0110204	FOXQ1.p2	AK051480|Fam113b|239647|family with sequence similarity 113, member B	NM_172293|Fam113b|239647|family with sequence similarity 113, member B
mm9_v1_chr2_-_51828440_51828551	0.0106801	FOXQ1.p2	BC002019|Nmi|64685|N-myc (and STAT) interactor	AK146577|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr16_+_49699314_49699432	0.0104781	FOXQ1.p2	DQ266091|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AF274590|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK047217|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	NM_028680|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK014731|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138143|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138144|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)
mm9_v1_chr3_-_142456600_142456910	0.0100283	FOXQ1.p2	AK140746|Pkn2|109333|protein kinase N2	AK084887|Pkn2|109333|protein kinase N2	AK082921|Pkn2|109333|protein kinase N2
mm9_v1_chr5_+_150821249_150821339	0.00993151	FOXQ1.p2	AF346501|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	NM_080468|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC120741|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144802|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144803|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	AK034592|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2
mm9_v1_chr2_+_172198490_172198574	0.00973085	FOXQ1.p2	AK177487|Cstf1|67337|cleavage stimulation factor, 3' pre-RNA, subunit 1
mm9_v1_chr12_-_106103214_106103237	0.00939451	FOXQ1.p2	BC141280|Clmn|94040|calmin
mm9_v1_chr12_-_74147698_74147707	0.00918428	FOXQ1.p2	AK131925|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	NM_009189|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	AK144753|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chr2_+_92025639_92025639	0.00871231	FOXQ1.p2	AK037174|Phf21a|192285|PHD finger protein 21A	NM_001109691|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr2_-_35972131_35972337	0.00858933	FOXQ1.p2	AK220096|Rbm18|67889|RNA binding motif protein 18
mm9_v1_chr4_+_125701902_125702025	0.00815305	FOXQ1.p2	AK144318|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	NM_007782|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	AK089305|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	M58288|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC115865|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC116635|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)
mm9_v1_chr15_+_10106992_10106998	0.00804225	FOXQ1.p2	AK054551|Prlr|19116|prolactin receptor	NM_011169|Prlr|19116|prolactin receptor	AK042147|Prlr|19116|prolactin receptor
mm9_v1_chr1_+_51346086_51346100	0.00796057	FOXQ1.p2	AK084096|Sdpr|20324|serum deprivation response
mm9_v1_chr6_-_23600205_23600304	0.00793033	FOXQ1.p2	BC116423|Rnf133|386611|ring finger protein 133	BC116424|Rnf133|386611|ring finger protein 133	AK028082|Rnf133|386611|ring finger protein 133	NM_198251|Rnf133|386611|ring finger protein 133
mm9_v1_chr5_-_24781987_24782111	0.00789118	FOXQ1.p2	AK077567|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3
mm9_v1_chr13_-_12350266_12350476	0.00775929	FOXQ1.p2	BC145683|Mtr|238505|5-methyltetrahydrofolate-homocysteine methyltransferase	BC145685|Mtr|238505|5-methyltetrahydrofolate-homocysteine methyltransferase	NM_001081128|Mtr|238505|5-methyltetrahydrofolate-homocysteine methyltransferase	AK142258|Mtr|238505|5-methyltetrahydrofolate-homocysteine methyltransferase	AK037599|Mtr|238505|5-methyltetrahydrofolate-homocysteine methyltransferase
mm9_v1_chr6_+_54251485_54251608	0.00769826	FOXQ1.p2	
mm9_v1_chr12_+_38607291_38607482	0.00733258	FOXQ1.p2	AK139408|Dgkb|217480|diacylglycerol kinase, beta	NM_178681|Dgkb|217480|diacylglycerol kinase, beta	AK083222|Dgkb|217480|diacylglycerol kinase, beta	AK047682|Dgkb|217480|diacylglycerol kinase, beta	AK044516|Dgkb|217480|diacylglycerol kinase, beta
mm9_v1_chr6_+_145756902_145756931	0.00714956	FOXQ1.p2	AF424737|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_027760|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC115779|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC117546|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm9_v1_chr17_+_41071633_41071710	0.00710055	FOXQ1.p2	NM_008650|Mut|17850|methylmalonyl-Coenzyme A mutase	BC019175|Mut|17850|methylmalonyl-Coenzyme A mutase	AK146309|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr2_-_17978221_17978239	0.00705771	FOXQ1.p2	AK007903|1810059C17Rik|69818|RIKEN cDNA 1810059C17 gene
mm9_v1_chr5_+_122821868_122821884	0.00669855	FOXQ1.p2	AK042405|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr2_-_32279522_32279542	0.00663229	FOXQ1.p2	BC022114|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	BC019978|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr7_+_24897332_24897378	0.00661298	FOXQ1.p2	AF167319|Zfp112|57745|zinc finger protein 112	NM_021307|Zfp112|57745|zinc finger protein 112	BC120886|Zfp112|57745|zinc finger protein 112
mm9_v1_chr1_-_75250520_75250549	0.0056124	FOXQ1.p2	BC064020|Ptprn|19275|protein tyrosine phosphatase, receptor type, N
mm9_v1_chr2_+_34262399_34262511	0.00507156	FOXQ1.p2	BC043296|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr5_+_91456489_91456542	0.00500438	FOXQ1.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr1_+_45368568_45368573	0.00482118	FOXQ1.p2	M18933|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr2_+_162759135_162759161	0.00469452	FOXQ1.p2	AK212807|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr7_-_4817767_4817818	0.00452975	FOXQ1.p2	BC049278|Isoc2b|67441|isochorismatase domain containing 2b	AK002905|Isoc2b|67441|isochorismatase domain containing 2b	NM_026158|Isoc2b|67441|isochorismatase domain containing 2b
mm9_v1_chr15_+_9001154_9001214	0.00382948	FOXQ1.p2	BC115776|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr8_-_74998992_74999131	0.00368558	FOXQ1.p2	BC032191|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK144328|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AF536541|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK049765|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK017525|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	BC020488|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	NM_138585|Cherp|27967|calcium homeostasis endoplasmic reticulum protein
mm9_v1_chr2_-_105843271_105843398	0.00364808	FOXQ1.p2	BC091774|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24	AY028460|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24
mm9_v1_chr9_+_77961211_77961215	0.0035779	FOXQ1.p2	AF225918|Ick|56542|intestinal cell kinase
mm9_v1_chr1_+_90303576_90303673	0.00329969	FOXQ1.p2	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr2_-_51828671_51828727	0.00305685	FOXQ1.p2	NM_001141948|Nmi|64685|N-myc (and STAT) interactor	NM_001141949|Nmi|64685|N-myc (and STAT) interactor	NM_019401|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr2_-_89247233_89247234	0.00297694	FOXQ1.p2	NM_146790|Olfr1238|258786|olfactory receptor 1238	BC128571|Olfr1238|258786|olfactory receptor 1238
mm9_v1_chr17_+_34056555_34056581	0.00288037	FOXQ1.p2	AK014566|Tapbp|21356|TAP binding protein	AF043943|Tapbp|21356|TAP binding protein
mm9_v1_chr3_+_84668066_84668066	0.0025327	FOXQ1.p2	BC066093|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_001177774|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr13_-_41582649_41582707	0.00213767	FOXQ1.p2	BC053713|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK083374|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK030985|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AF009366|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_001111324|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr8_-_114045907_114045969	0.00180371	FOXQ1.p2	AK173301|Wdr59|319481|WD repeat domain 59
mm9_v1_chr4_-_150421459_150421590	0.00171133	FOXQ1.p2	
mm9_v1_chr5_+_32761533_32761558	0.00119483	FOXQ1.p2	AK147112|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK157914|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr16_+_13358513_13358556	0.00020795	FOXQ1.p2	NM_153588|Mkl2|239719|MKL/myocardin-like 2
