mm9_v1_chr1_+_134212642_134212774	1.90653	GAGAUGA	NM_001195025|Nuak2|74137|NUAK family, SNF1-like kinase, 2	NM_028778|Nuak2|74137|NUAK family, SNF1-like kinase, 2	AK034082|Nuak2|74137|NUAK family, SNF1-like kinase, 2	AK004737|Nuak2|74137|NUAK family, SNF1-like kinase, 2	AK033672|Nuak2|74137|NUAK family, SNF1-like kinase, 2	BC046833|Nuak2|74137|NUAK family, SNF1-like kinase, 2	BC033302|Nuak2|74137|NUAK family, SNF1-like kinase, 2
mm9_v1_chr1_-_72921438_72921462	1.76141	GAGAUGA	BC057447|Igfbp5|16011|insulin-like growth factor binding protein 5	NM_010518|Igfbp5|16011|insulin-like growth factor binding protein 5	AK142108|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr12_+_53800369_53800393	1.07349	GAGAUGA	AK147248|Akap6|238161|A kinase (PRKA) anchor protein 6	AK147371|Akap6|238161|A kinase (PRKA) anchor protein 6	NM_198111|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr13_+_15555483_15555555	0.98957	GAGAUGA	AK158261|Gli3|14634|GLI-Kruppel family member GLI3	NM_008130|Gli3|14634|GLI-Kruppel family member GLI3
mm9_v1_chr2_+_162880370_162880424	0.821734	GAGAUGA	AK028497|Mybl2|17865|myeloblastosis oncogene-like 2	NM_008652|Mybl2|17865|myeloblastosis oncogene-like 2	X70472|Mybl2|17865|myeloblastosis oncogene-like 2	BC050842|Mybl2|17865|myeloblastosis oncogene-like 2
mm9_v1_chr19_-_47538898_47538933	0.752384	GAGAUGA	AJ007012|Sh3pxd2a|14218|SH3 and PX domains 2A	NM_001164717|Sh3pxd2a|14218|SH3 and PX domains 2A	NM_008018|Sh3pxd2a|14218|SH3 and PX domains 2A
mm9_v1_chr4_-_131978279_131978374	0.726417	GAGAUGA	BC096033|Phactr4|100169|phosphatase and actin regulator 4	AK049209|Phactr4|100169|phosphatase and actin regulator 4	BC075672|Phactr4|100169|phosphatase and actin regulator 4	AK220496|Phactr4|100169|phosphatase and actin regulator 4	NM_001161797|Phactr4|100169|phosphatase and actin regulator 4	NM_175306|Phactr4|100169|phosphatase and actin regulator 4
mm9_v1_chr8_+_72346327_72346515	0.710915	GAGAUGA	BC060131|Lpar2|53978|lysophosphatidic acid receptor 2	BC064676|Lpar2|53978|lysophosphatidic acid receptor 2	AK144861|Lpar2|53978|lysophosphatidic acid receptor 2	NM_020028|Lpar2|53978|lysophosphatidic acid receptor 2	AK143792|Lpar2|53978|lysophosphatidic acid receptor 2	AK051092|Lpar2|53978|lysophosphatidic acid receptor 2
mm9_v1_chr6_+_133985717_133985901	0.681474	GAGAUGA	AK155150|Etv6|14011|ets variant gene 6 (TEL oncogene)	NM_007961|Etv6|14011|ets variant gene 6 (TEL oncogene)	AK154569|Etv6|14011|ets variant gene 6 (TEL oncogene)
mm9_v1_chr10_+_17516024_17516131	0.674471	GAGAUGA	AK084639|Txlnb|378431|taxilin beta	NM_138628|Txlnb|378431|taxilin beta	AK084579|Txlnb|378431|taxilin beta	AK052324|Txlnb|378431|taxilin beta	AF422244|Txlnb|378431|taxilin beta	AF422245|Txlnb|378431|taxilin beta	AK137442|Txlnb|378431|taxilin beta	BC141023|Txlnb|378431|taxilin beta	AK085904|Txlnb|378431|taxilin beta
mm9_v1_chr7_+_82600419_82600490	0.574317	GAGAUGA	NM_029332|Akap13|75547|A kinase (PRKA) anchor protein 13	AK157986|Akap13|75547|A kinase (PRKA) anchor protein 13	AK172125|Akap13|75547|A kinase (PRKA) anchor protein 13
mm9_v1_chrX_+_97972559_97972657	0.515352	GAGAUGA	NM_001177780|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK159655|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK167365|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK148464|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chr6_-_82724366_82724447	0.505338	GAGAUGA	BC054472|Hk2|15277|hexokinase 2	AJ238540|Hk2|15277|hexokinase 2	AK019092|Hk2|15277|hexokinase 2	AK145936|Hk2|15277|hexokinase 2	AK009328|Hk2|15277|hexokinase 2	NM_013820|Hk2|15277|hexokinase 2
mm9_v1_chr5_+_104183148_104183208	0.505036	GAGAUGA	AK142554|Aff1|17355|AF4/FMR2 family, member 1	NM_133919|Aff1|17355|AF4/FMR2 family, member 1
mm9_v1_chr5_+_143722032_143722059	0.478999	GAGAUGA	NM_007984|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	AK083935|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	AK167670|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	BC052408|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	BC029281|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	BC010338|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	BC037137|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	L33726|Fscn1|14086|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)
mm9_v1_chr4_+_100449274_100449299	0.476169	GAGAUGA	AK080923|Cachd1|320508|cache domain containing 1	BC058676|Cachd1|320508|cache domain containing 1	NM_198037|Cachd1|320508|cache domain containing 1
mm9_v1_chr1_-_159342713_159342735	0.443804	GAGAUGA	AK039584|Rasal2|226525|RAS protein activator like 2	NM_177644|Rasal2|226525|RAS protein activator like 2
mm9_v1_chr17_+_27693518_27693641	0.421059	GAGAUGA	NM_001025427|Hmga1|15361|high mobility group AT-hook 1	NM_001039356|Hmga1|15361|high mobility group AT-hook 1	NM_001166535|Hmga1|15361|high mobility group AT-hook 1	NM_001166536|Hmga1|15361|high mobility group AT-hook 1	NM_001166539|Hmga1|15361|high mobility group AT-hook 1	NM_001166540|Hmga1|15361|high mobility group AT-hook 1	NM_001166541|Hmga1|15361|high mobility group AT-hook 1	NM_001166542|Hmga1|15361|high mobility group AT-hook 1	NM_001166543|Hmga1|15361|high mobility group AT-hook 1	NM_001166544|Hmga1|15361|high mobility group AT-hook 1	NM_001166545|Hmga1|15361|high mobility group AT-hook 1	NM_001166546|Hmga1|15361|high mobility group AT-hook 1	NM_001166537|Hmga1|15361|high mobility group AT-hook 1	NM_016660|Hmga1|15361|high mobility group AT-hook 1	AK171334|Hmga1|15361|high mobility group AT-hook 1	AK155661|Hmga1|15361|high mobility group AT-hook 1	BC013455|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	AK010617|Hmga1|15361|high mobility group AT-hook 1	AK169783|Hmga1|15361|high mobility group AT-hook 1	NM_001166476|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	NM_001166477|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	AK154957|Hmga1|15361|high mobility group AT-hook 1	AK160036|Hmga1|15361|high mobility group AT-hook 1	BC008125|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	BC093496|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1
mm9_v1_chr11_+_57822347_57822565	0.41947	GAGAUGA	NM_028451|Larp1|73158|La ribonucleoprotein domain family, member 1
mm9_v1_chr7_+_65913571_65913874	0.385969	GAGAUGA	NM_009728|Atp10a|11982|ATPase, class V, type 10A	AK132174|Atp10a|11982|ATPase, class V, type 10A	AK172149|Atp10a|11982|ATPase, class V, type 10A	AF156549|Atp10a|11982|ATPase, class V, type 10A	BC138356|Atp10a|11982|ATPase, class V, type 10A	BC138357|Atp10a|11982|ATPase, class V, type 10A	AK172972|Atp10a|11982|ATPase, class V, type 10A	AF011337|Atp10a|11982|ATPase, class V, type 10A
mm9_v1_chr4_+_135762279_135762338	0.383533	GAGAUGA	NM_001008232|Asap3|230837|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3	AK132294|Asap3|230837|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3	BC085250|Asap3|230837|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
mm9_v1_chr6_-_145198693_145198778	0.357358	GAGAUGA	BC119495|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC004642|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC010202|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	AK155064|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	AK164065|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	NM_021284|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
mm9_v1_chr1_+_89223558_89223642	0.354388	GAGAUGA	NM_146112|Gigyf2|227331|GRB10 interacting GYF protein 2	AK079246|Gigyf2|227331|GRB10 interacting GYF protein 2	NM_001110212|Gigyf2|227331|GRB10 interacting GYF protein 2	AK011414|Gigyf2|227331|GRB10 interacting GYF protein 2	AK034426|Gigyf2|227331|GRB10 interacting GYF protein 2	AK160878|Gigyf2|227331|GRB10 interacting GYF protein 2	AK144058|Gigyf2|227331|GRB10 interacting GYF protein 2	BC089036|Gigyf2|227331|GRB10 interacting GYF protein 2	BC006835|Gigyf2|227331|GRB10 interacting GYF protein 2	BC076610|Gigyf2|227331|GRB10 interacting GYF protein 2	AY176043|Gigyf2|227331|GRB10 interacting GYF protein 2	AK137375|Gigyf2|227331|GRB10 interacting GYF protein 2
mm9_v1_chr1_-_97564139_97564174	0.346554	GAGAUGA	BC060112|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AJ223956|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_001159745|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_009183|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	X86000|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chrX_+_135744582_135744582	0.333239	GAGAUGA	NM_001164630|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_175541|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr18_-_77803843_77803942	0.315179	GAGAUGA	DQ465971|8030462N17Rik|212163|RIKEN cDNA 8030462N17 gene	NM_001164504|Rnf165|225743|ring finger protein 165
mm9_v1_chr16_+_13256573_13256634	0.31123	GAGAUGA	NM_001122667|Mkl2|239719|MKL/myocardin-like 2	X66901|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chrX_-_137077639_137077729	0.310614	GAGAUGA	BC028813|Tsc22d3|14605|TSC22 domain family, member 3	AF201288|Tsc22d3|14605|TSC22 domain family, member 3	AF024519|Tsc22d3|14605|TSC22 domain family, member 3	AK083389|Tsc22d3|14605|TSC22 domain family, member 3	NM_010286|Tsc22d3|14605|TSC22 domain family, member 3	AK144196|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr6_+_120786207_120786296	0.287922	GAGAUGA	AK171256|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK148007|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK031018|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK088417|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK143457|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK132774|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK047223|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	BC029016|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	NM_153516|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK165068|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK168833|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)
mm9_v1_chrX_+_55283804_55283819	0.27577	GAGAUGA	AK139364|Zic3|22773|zinc finger protein of the cerebellum 3	NM_009575|Zic3|22773|zinc finger protein of the cerebellum 3
mm9_v1_chr13_+_98011057_98011069	0.273293	GAGAUGA	AK132173|Enc1|13803|ectodermal-neural cortex 1	NM_007930|Enc1|13803|ectodermal-neural cortex 1	AK044906|Enc1|13803|ectodermal-neural cortex 1	AK049187|Enc1|13803|ectodermal-neural cortex 1
mm9_v1_chr19_-_36994088_36994132	0.26994	GAGAUGA	BC055778|Fgfbp3|72514|fibroblast growth factor binding protein 3	NM_028263|Fgfbp3|72514|fibroblast growth factor binding protein 3	AK167949|Fgfbp3|72514|fibroblast growth factor binding protein 3
mm9_v1_chr1_-_153937364_153937449	0.264477	GAGAUGA	AK144357|LOC545371|545371|hypothetical protein LOC545371	NM_197990|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene
mm9_v1_chr2_+_5872500_5872551	0.248811	GAGAUGA	BC049622|Upf2|326622|UPF2 regulator of nonsense transcripts homolog (yeast)	NM_001081132|Upf2|326622|UPF2 regulator of nonsense transcripts homolog (yeast)	BC138358|Upf2|326622|UPF2 regulator of nonsense transcripts homolog (yeast)	BC138359|Upf2|326622|UPF2 regulator of nonsense transcripts homolog (yeast)
mm9_v1_chr19_-_12576485_12576634	0.239758	GAGAUGA	NM_172442|Dtx4|207521|deltex 4 homolog (Drosophila)
mm9_v1_chr8_+_74659107_74659219	0.235256	GAGAUGA	AK049383|Tpm4|326618|tropomyosin 4	BC070421|Tpm4|326618|tropomyosin 4	NM_001001491|Tpm4|326618|tropomyosin 4	BC023701|Tpm4|326618|tropomyosin 4	BC032174|Tpm4|326618|tropomyosin 4	BC032175|Tpm4|326618|tropomyosin 4	BC023827|Tpm4|326618|tropomyosin 4
mm9_v1_chr11_-_88579517_88579542	0.23105	GAGAUGA	AK156439|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049637|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049688|Msi2|76626|Musashi homolog 2 (Drosophila)	NM_054043|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr6_+_83065466_83065564	0.226264	GAGAUGA	AK144946|Mogs|57377|mannosyl-oligosaccharide glucosidase	BC051949|Mogs|57377|mannosyl-oligosaccharide glucosidase	NM_020619|Mogs|57377|mannosyl-oligosaccharide glucosidase	AK157286|Mogs|57377|mannosyl-oligosaccharide glucosidase
mm9_v1_chr1_+_177810908_177810944	0.217191	GAGAUGA	NM_012012|Exo1|26909|exonuclease 1	AK028728|Exo1|26909|exonuclease 1	AK166425|Exo1|26909|exonuclease 1	BC006671|Exo1|26909|exonuclease 1
mm9_v1_chr2_-_166888514_166888514	0.213195	GAGAUGA	AK147564|Znfx1|98999|zinc finger, NFX1-type containing 1	AK147652|Znfx1|98999|zinc finger, NFX1-type containing 1	NM_001033196|Znfx1|98999|zinc finger, NFX1-type containing 1
mm9_v1_chr18_+_42435006_42435038	0.206099	GAGAUGA	NM_172626|Rbm27|225432|RNA binding motif protein 27	AY461716|Rbm27|225432|RNA binding motif protein 27
mm9_v1_chr9_-_44150387_44150463	0.19704	GAGAUGA	AK028234|Hmbs|15288|hydroxymethylbilane synthase	AK143558|Hmbs|15288|hydroxymethylbilane synthase	AK158160|Hmbs|15288|hydroxymethylbilane synthase	NM_001110251|Hmbs|15288|hydroxymethylbilane synthase
mm9_v1_chr8_+_41597112_41597221	0.193665	GAGAUGA	AK171221|Vps37a|52348|vacuolar protein sorting 37A (yeast)	NM_033560|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK170961|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK171055|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK137479|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK016385|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK048942|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK054055|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK170280|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK157507|Vps37a|52348|vacuolar protein sorting 37A (yeast)	AK170943|Vps37a|52348|vacuolar protein sorting 37A (yeast)	BC039290|Vps37a|52348|vacuolar protein sorting 37A (yeast)	BC110396|Vps37a|52348|vacuolar protein sorting 37A (yeast)
mm9_v1_chr1_+_64579358_64579513	0.191445	GAGAUGA	NM_001037726|Creb1|12912|cAMP responsive element binding protein 1	NM_009952|Creb1|12912|cAMP responsive element binding protein 1	NM_133828|Creb1|12912|cAMP responsive element binding protein 1	AK079223|Creb1|12912|cAMP responsive element binding protein 1	X92497|Creb1|12912|cAMP responsive element binding protein 1	AK042595|Creb1|12912|cAMP responsive element binding protein 1	BC021649|Creb1|12912|cAMP responsive element binding protein 1	M95106|Creb1|12912|cAMP responsive element binding protein 1	AF448507|Creb1|12912|cAMP responsive element binding protein 1
mm9_v1_chr2_-_93174606_93174694	0.188068	GAGAUGA	BC052169|Tspan18|241556|tetraspanin 18	AK042573|Tspan18|241556|tetraspanin 18	NM_183180|Tspan18|241556|tetraspanin 18	AK011742|Tspan18|241556|tetraspanin 18
mm9_v1_chr7_+_75097142_75097267	0.184939	GAGAUGA	NM_010513|Igf1r|16001|insulin-like growth factor I receptor
mm9_v1_chrX_+_50265390_50265552	0.178891	GAGAUGA	AK157045|Phf6|70998|PHD finger protein 6	AK012211|Phf6|70998|PHD finger protein 6	AK077803|Phf6|70998|PHD finger protein 6	AK163345|Phf6|70998|PHD finger protein 6	BC043127|Phf6|70998|PHD finger protein 6	NM_027642|Phf6|70998|PHD finger protein 6	AK141804|Phf6|70998|PHD finger protein 6	BC055330|Phf6|70998|PHD finger protein 6	AK122560|Phf6|70998|PHD finger protein 6	AK028498|Phf6|70998|PHD finger protein 6	AK038320|Phf6|70998|PHD finger protein 6	BC057374|Phf6|70998|PHD finger protein 6	AK192342|Phf6|70998|PHD finger protein 6	AK213676|Phf6|70998|PHD finger protein 6
mm9_v1_chr9_+_47338431_47338446	0.178361	GAGAUGA	AB052293|Cadm1|54725|cell adhesion molecule 1	AB377192|Cadm1|54725|cell adhesion molecule 1	AK053839|Cadm1|54725|cell adhesion molecule 1	NM_001025600|Cadm1|54725|cell adhesion molecule 1	NM_018770|Cadm1|54725|cell adhesion molecule 1	NM_207675|Cadm1|54725|cell adhesion molecule 1	NM_207676|Cadm1|54725|cell adhesion molecule 1	AF539424|Cadm1|54725|cell adhesion molecule 1	BC095986|Cadm1|54725|cell adhesion molecule 1	BC069937|Cadm1|54725|cell adhesion molecule 1	BC057125|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr5_-_135164426_135164540	0.175626	GAGAUGA	BC063768|Limk1|16885|LIM-domain containing, protein kinase	AK141813|Limk1|16885|LIM-domain containing, protein kinase	AK164484|Limk1|16885|LIM-domain containing, protein kinase	U15159|Limk1|16885|LIM-domain containing, protein kinase	NM_010717|Limk1|16885|LIM-domain containing, protein kinase	U14166|Limk1|16885|LIM-domain containing, protein kinase
mm9_v1_chr4_-_87679175_87679310	0.174884	GAGAUGA	BC021420|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AF372456|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_027326|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr11_-_87172419_87172533	0.172739	GAGAUGA	AK053696|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138900|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138903|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	NM_177167|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chr11_+_98657082_98657130	0.167076	GAGAUGA	BC058629|Msl1|74026|male-specific lethal 1 homolog (Drosophila)	NM_028722|Msl1|74026|male-specific lethal 1 homolog (Drosophila)	BC043039|Msl1|74026|male-specific lethal 1 homolog (Drosophila)	AK053719|Msl1|74026|male-specific lethal 1 homolog (Drosophila)	BC055715|Msl1|74026|male-specific lethal 1 homolog (Drosophila)
mm9_v1_chr4_-_131604821_131605088	0.163741	GAGAUGA	BC079875|Epb4.1|269587|erythrocyte protein band 4.1	AK220462|Epb4.1|269587|erythrocyte protein band 4.1	NM_001128606|Epb4.1|269587|erythrocyte protein band 4.1
mm9_v1_chr17_-_12962478_12962617	0.162859	GAGAUGA	BC150817|Igf2r|16004|insulin-like growth factor 2 receptor	BC171973|Igf2r|16004|insulin-like growth factor 2 receptor	U04710|Igf2r|16004|insulin-like growth factor 2 receptor	NM_010515|Igf2r|16004|insulin-like growth factor 2 receptor
mm9_v1_chr15_+_75447114_75447188	0.161589	GAGAUGA	NM_001044718|Zfp41|22701|zinc finger protein 41	NM_011759|Zfp41|22701|zinc finger protein 41	AK030420|Zfp41|22701|zinc finger protein 41	BC053927|Zfp41|22701|zinc finger protein 41
mm9_v1_chr5_+_31357119_31357185	0.161552	GAGAUGA	BC053097|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_023525|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	BC060119|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
mm9_v1_chr4_-_86315874_86315968	0.151457	GAGAUGA	BC054766|Plin2|11520|perilipin 2	AK152896|Plin2|11520|perilipin 2	BC047124|Plin2|11520|perilipin 2	AK152263|Plin2|11520|perilipin 2	AK090277|Plin2|11520|perilipin 2	AK002911|Plin2|11520|perilipin 2	AK150177|Plin2|11520|perilipin 2	AK152081|Plin2|11520|perilipin 2	AK152877|Plin2|11520|perilipin 2	AK154582|Plin2|11520|perilipin 2	M93275|Plin2|11520|perilipin 2	AK167140|Plin2|11520|perilipin 2	AK153222|Plin2|11520|perilipin 2	AK152982|Plin2|11520|perilipin 2	NM_007408|Plin2|11520|perilipin 2
mm9_v1_chr4_+_21703416_21703444	0.15137	GAGAUGA	AK040660|Usp45|77593|ubiquitin specific petidase 45	AK162825|Usp45|77593|ubiquitin specific petidase 45	NM_152825|Usp45|77593|ubiquitin specific petidase 45	AK088073|Usp45|77593|ubiquitin specific petidase 45	BC027768|Usp45|77593|ubiquitin specific petidase 45
mm9_v1_chr16_-_33056255_33056271	0.151343	GAGAUGA	BC049990|Iqcg|69707|IQ motif containing G	AK158170|Iqcg|69707|IQ motif containing G	NM_178378|Iqcg|69707|IQ motif containing G
mm9_v1_chr11_+_30671734_30671781	0.14591	GAGAUGA	NM_134013|Psme4|103554|proteasome (prosome, macropain) activator subunit 4
mm9_v1_chr8_+_82163574_82163602	0.145807	GAGAUGA	NM_001081164|Otud4|73945|OTU domain containing 4	BC138373|Otud4|73945|OTU domain containing 4	BC145259|Otud4|73945|OTU domain containing 4
mm9_v1_chrX_-_132706705_132706789	0.144143	GAGAUGA	AK137039|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK012030|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK027927|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK083347|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK156414|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK014459|Tceal8|66684|transcription elongation factor A (SII)-like 8	BC027269|Tceal8|66684|transcription elongation factor A (SII)-like 8	AK076203|Tceal8|66684|transcription elongation factor A (SII)-like 8	NM_001168578|Tceal8|66684|transcription elongation factor A (SII)-like 8	NM_025703|Tceal8|66684|transcription elongation factor A (SII)-like 8
mm9_v1_chr2_-_160934743_160934810	0.142518	GAGAUGA	BC145629|Chd6|71389|chromodomain helicase DNA binding protein 6	BC150806|Chd6|71389|chromodomain helicase DNA binding protein 6	AK018129|Chd6|71389|chromodomain helicase DNA binding protein 6	AK040495|Chd6|71389|chromodomain helicase DNA binding protein 6	AK142177|Chd6|71389|chromodomain helicase DNA binding protein 6	AK086807|Chd6|71389|chromodomain helicase DNA binding protein 6	AK162083|Chd6|71389|chromodomain helicase DNA binding protein 6	NM_173368|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080892|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080927|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr4_+_41082993_41083094	0.139086	GAGAUGA	AK003550|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	AK075703|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	BC011112|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	AK075714|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	NM_026275|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	AJ240086|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2
mm9_v1_chr2_-_153067043_153067211	0.137216	GAGAUGA	BC037664|Plagl2|54711|pleiomorphic adenoma gene-like 2	BC078453|Plagl2|54711|pleiomorphic adenoma gene-like 2	NM_018807|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK040626|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK133833|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK141713|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK150243|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK129087|Plagl2|54711|pleiomorphic adenoma gene-like 2
mm9_v1_chr4_-_87452140_87452217	0.13681	GAGAUGA	AK147009|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK008707|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK019458|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_029931|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr1_-_157820378_157820386	0.133584	GAGAUGA	AK044664|Cep350|74081|centrosomal protein 350	NM_001039184|Cep350|74081|centrosomal protein 350
mm9_v1_chr13_+_52678805_52678835	0.13267	GAGAUGA	AK049207|Sykb|20963|spleen tyrosine kinase	NM_001198977|Sykb|20963|spleen tyrosine kinase
mm9_v1_chr7_-_129164546_129164728	0.132461	GAGAUGA	AK187372|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK129280|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	BC062933|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK004632|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK154904|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK143691|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK159953|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK149798|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	NM_028758|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm9_v1_chr11_-_72225084_72225217	0.130754	GAGAUGA	AK085988|Smtnl2|276829|smoothelin-like 2	BC037993|Smtnl2|276829|smoothelin-like 2	AK051585|Smtnl2|276829|smoothelin-like 2	NM_177776|Smtnl2|276829|smoothelin-like 2
mm9_v1_chrX_+_103382432_103382595	0.12965	GAGAUGA	NM_008828|Pgk1|18655|phosphoglycerate kinase 1	AK145846|Pgk1|18655|phosphoglycerate kinase 1	AK133877|Pgk1|18655|phosphoglycerate kinase 1	AK164440|Pgk1|18655|phosphoglycerate kinase 1	BC108372|Pgk1|18655|phosphoglycerate kinase 1	BC023819|Pgk1|18655|phosphoglycerate kinase 1	BC032167|Pgk1|18655|phosphoglycerate kinase 1	AK167441|Pgk1|18655|phosphoglycerate kinase 1	AK167459|Pgk1|18655|phosphoglycerate kinase 1	AK167710|Pgk1|18655|phosphoglycerate kinase 1	BC083355|Pgk1|18655|phosphoglycerate kinase 1	M15668|Pgk1|18655|phosphoglycerate kinase 1	EF437325|Pgk1|18655|phosphoglycerate kinase 1
mm9_v1_chr1_+_63319842_63319842	0.127854	GAGAUGA	AK015271|Zdbf2|73884|zinc finger, DBF-type containing 2	AK132808|Zdbf2|73884|zinc finger, DBF-type containing 2	NM_028673|Zdbf2|73884|zinc finger, DBF-type containing 2
mm9_v1_chr11_-_86014640_86014708	0.127594	GAGAUGA	AK169440|Brip1|237911|BRCA1 interacting protein C-terminal helicase 1	BC094252|Brip1|237911|BRCA1 interacting protein C-terminal helicase 1	AK169823|Brip1|237911|BRCA1 interacting protein C-terminal helicase 1	AK014036|Brip1|237911|BRCA1 interacting protein C-terminal helicase 1	AK033205|Brip1|237911|BRCA1 interacting protein C-terminal helicase 1	AK051878|Brip1|237911|BRCA1 interacting protein C-terminal helicase 1	AK145709|Brip1|237911|BRCA1 interacting protein C-terminal helicase 1	NM_178309|Brip1|237911|BRCA1 interacting protein C-terminal helicase 1
mm9_v1_chr1_-_163061538_163061643	0.126387	GAGAUGA	BC060183|Klhl20|226541|kelch-like 20 (Drosophila)	AK053102|Klhl20|226541|kelch-like 20 (Drosophila)	AK053371|Klhl20|226541|kelch-like 20 (Drosophila)	AK054169|Klhl20|226541|kelch-like 20 (Drosophila)	BC019571|Klhl20|226541|kelch-like 20 (Drosophila)	AK220547|Klhl20|226541|kelch-like 20 (Drosophila)	NM_001039482|Klhl20|226541|kelch-like 20 (Drosophila)
mm9_v1_chr4_+_14791353_14791554	0.126082	GAGAUGA	AK049213|Tmem55a|72519|transmembrane protein 55A	NM_028264|Tmem55a|72519|transmembrane protein 55A	AK033845|Tmem55a|72519|transmembrane protein 55A	AK012054|Tmem55a|72519|transmembrane protein 55A	AX775959|Tmem55a|72519|transmembrane protein 55A	BC021435|Tmem55a|72519|transmembrane protein 55A	AK206695|Tmem55a|72519|transmembrane protein 55A
mm9_v1_chr11_+_23565975_23566215	0.123748	GAGAUGA	NM_028304|Pus10|74467|pseudouridylate synthase 10	AK145055|Pus10|74467|pseudouridylate synthase 10	BC025555|Pus10|74467|pseudouridylate synthase 10	AK087766|Pus10|74467|pseudouridylate synthase 10	AK012737|Pus10|74467|pseudouridylate synthase 10
mm9_v1_chr6_+_127837606_127837652	0.122355	GAGAUGA	AK087294|Tspan11|68498|tetraspanin 11	NM_026743|Tspan11|68498|tetraspanin 11	AK090022|Tspan11|68498|tetraspanin 11	AK053788|Tspan11|68498|tetraspanin 11
mm9_v1_chr15_+_98462650_98462843	0.120566	GAGAUGA	NM_001044741|Cacnb3|12297|calcium channel, voltage-dependent, beta 3 subunit
mm9_v1_chr8_+_95351212_95351327	0.119479	GAGAUGA	BC070430|Mmp2|17390|matrix metallopeptidase 2	NM_008610|Mmp2|17390|matrix metallopeptidase 2	AK148184|Mmp2|17390|matrix metallopeptidase 2
mm9_v1_chr1_-_113761344_113761496	0.118671	GAGAUGA	AK164854|Dsel|319901|dermatan sulfate epimerase-like	AK033983|Dsel|319901|dermatan sulfate epimerase-like	NM_001081316|Dsel|319901|dermatan sulfate epimerase-like
mm9_v1_chr11_+_83116148_83116241	0.118206	GAGAUGA	AK138434|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	NM_001035854|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	NM_027915|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	AK030505|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	BC046772|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit	AK032617|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit
mm9_v1_chr11_-_95171521_95171560	0.118202	GAGAUGA	AK078483|Myst2|217127|MYST histone acetyltransferase 2	AK166915|Myst2|217127|MYST histone acetyltransferase 2	NM_001195003|Myst2|217127|MYST histone acetyltransferase 2	NM_001195004|Myst2|217127|MYST histone acetyltransferase 2	NM_177619|Myst2|217127|MYST histone acetyltransferase 2
mm9_v1_chr6_-_119494295_119494364	0.11754	GAGAUGA	BC051406|Wnt5b|22419|wingless-related MMTV integration site 5B	AK013218|Wnt5b|22419|wingless-related MMTV integration site 5B	NM_009525|Wnt5b|22419|wingless-related MMTV integration site 5B
mm9_v1_chr6_-_71390592_71390638	0.11431	GAGAUGA	AK164384|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	NM_024288|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr11_-_69648350_69648356	0.113594	GAGAUGA	AK173159|Nlgn2|216856|neuroligin 2	NM_198862|Nlgn2|216856|neuroligin 2
mm9_v1_chr15_-_88971039_88971132	0.113235	GAGAUGA	BC021640|Mapk12|29857|mitogen-activated protein kinase 12	Y13439|Mapk12|29857|mitogen-activated protein kinase 12	AK011286|Mapk12|29857|mitogen-activated protein kinase 12	AK165741|Mapk12|29857|mitogen-activated protein kinase 12	NM_013871|Mapk12|29857|mitogen-activated protein kinase 12
mm9_v1_chr15_+_58247016_58247063	0.112751	GAGAUGA	AK137324|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	NM_145959|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	BC070426|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed
mm9_v1_chr18_+_44540137_44540241	0.111874	GAGAUGA	AK153105|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	NM_027490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK008609|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK017809|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK166560|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK010490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK152160|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153264|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153310|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)
mm9_v1_chr7_+_3290516_3290583	0.111486	GAGAUGA	AJ001616|Myadm|50918|myeloid-associated differentiation marker	NM_016969|Myadm|50918|myeloid-associated differentiation marker	NM_001093765|Myadm|50918|myeloid-associated differentiation marker	AK089538|Myadm|50918|myeloid-associated differentiation marker	AK149962|Myadm|50918|myeloid-associated differentiation marker	AK159160|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr13_-_23461025_23461082	0.111204	GAGAUGA	BC043711|Zfp322a|218100|zinc finger protein 322A	AK162608|Zfp322a|218100|zinc finger protein 322A	AK170259|Zfp322a|218100|zinc finger protein 322A	AK170525|Zfp322a|218100|zinc finger protein 322A	NM_001111107|Zfp322a|218100|zinc finger protein 322A	NM_172586|Zfp322a|218100|zinc finger protein 322A	AK036302|Zfp322a|218100|zinc finger protein 322A	AK036877|Zfp322a|218100|zinc finger protein 322A
mm9_v1_chr15_+_102236709_102236810	0.104675	GAGAUGA	EF200005|Sp1|20683|trans-acting transcription factor 1	NM_013672|Sp1|20683|trans-acting transcription factor 1	AF022363|Sp1|20683|trans-acting transcription factor 1	S79832|Sp1|20683|trans-acting transcription factor 1	AF062566|Sp1|20683|trans-acting transcription factor 1
mm9_v1_chr2_-_37278415_37278506	0.104116	GAGAUGA	BC117951|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	BC117952|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	AK053071|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2	NM_001100591|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2
mm9_v1_chr4_-_49562319_49562386	0.103952	GAGAUGA	BC026577|Aldob|230163|aldolase B, fructose-bisphosphate	BC034172|Aldob|230163|aldolase B, fructose-bisphosphate	BC034173|Aldob|230163|aldolase B, fructose-bisphosphate	BC022113|Aldob|230163|aldolase B, fructose-bisphosphate	BC034171|Aldob|230163|aldolase B, fructose-bisphosphate	BC036130|Aldob|230163|aldolase B, fructose-bisphosphate	BC016435|Aldob|230163|aldolase B, fructose-bisphosphate	BC036131|Aldob|230163|aldolase B, fructose-bisphosphate	BC036132|Aldob|230163|aldolase B, fructose-bisphosphate	BC036133|Aldob|230163|aldolase B, fructose-bisphosphate	NM_144903|Aldob|230163|aldolase B, fructose-bisphosphate	BC030724|Aldob|230163|aldolase B, fructose-bisphosphate	BC024112|Aldob|230163|aldolase B, fructose-bisphosphate	BC024056|Aldob|230163|aldolase B, fructose-bisphosphate	BC030725|Aldob|230163|aldolase B, fructose-bisphosphate	BC034169|Aldob|230163|aldolase B, fructose-bisphosphate	AK149598|Aldob|230163|aldolase B, fructose-bisphosphate	AK167566|Aldob|230163|aldolase B, fructose-bisphosphate	AK168600|Aldob|230163|aldolase B, fructose-bisphosphate	AK149395|Aldob|230163|aldolase B, fructose-bisphosphate	AK167334|Aldob|230163|aldolase B, fructose-bisphosphate	AK135385|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr8_-_60131768_60131885	0.103243	GAGAUGA	AF349573|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK030683|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK033427|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK036523|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	BC052461|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK041791|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	NM_001167981|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	NM_144731|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
mm9_v1_chr15_+_93228780_93228894	0.102602	GAGAUGA	AK168443|Pphln1|223828|periphilin 1	NM_001083114|Pphln1|223828|periphilin 1	NM_146062|Pphln1|223828|periphilin 1	NM_175363|Pphln1|223828|periphilin 1	AK081606|Pphln1|223828|periphilin 1	AK160138|Pphln1|223828|periphilin 1	BC031486|Pphln1|223828|periphilin 1	AK150904|Pphln1|223828|periphilin 1	BC150854|Pphln1|223828|periphilin 1	AK158488|Pphln1|223828|periphilin 1
mm9_v1_chr3_+_137286635_137286835	0.101711	GAGAUGA	AK018944|Ddit4l|73284|DNA-damage-inducible transcript 4-like	NM_030143|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK006617|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK053333|Ddit4l|73284|DNA-damage-inducible transcript 4-like	BC038131|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AF335325|Ddit4l|73284|DNA-damage-inducible transcript 4-like
mm9_v1_chr6_+_100783598_100783865	0.101557	GAGAUGA	BC110429|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK082539|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	NM_182939|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK084169|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC112399|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC056340|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC098464|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2
mm9_v1_chr12_+_53198729_53198769	0.10139	GAGAUGA	NM_029760|Nubpl|76826|nucleotide binding protein-like	AK152377|Nubpl|76826|nucleotide binding protein-like	AK083643|Nubpl|76826|nucleotide binding protein-like	BC062175|Nubpl|76826|nucleotide binding protein-like	AK010827|Nubpl|76826|nucleotide binding protein-like	AK141257|Nubpl|76826|nucleotide binding protein-like
mm9_v1_chr7_+_13483153_13483228	0.100543	GAGAUGA	AK052559|Zscan22|232878|zinc finger and SCAN domain containing 22	AK085207|Zscan22|232878|zinc finger and SCAN domain containing 22	NM_001001447|Zscan22|232878|zinc finger and SCAN domain containing 22	AK163694|Zscan22|232878|zinc finger and SCAN domain containing 22	AK078591|Zscan22|232878|zinc finger and SCAN domain containing 22	BC026676|Zscan22|232878|zinc finger and SCAN domain containing 22
mm9_v1_chr1_-_84835871_84836168	0.0990243	GAGAUGA	AK158807|Trip12|14897|thyroid hormone receptor interactor 12	NM_133975|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr6_-_134742645_134742743	0.0988411	GAGAUGA	AK144800|Dusp16|70686|dual specificity phosphatase 16	NM_001048054|Dusp16|70686|dual specificity phosphatase 16	NM_130447|Dusp16|70686|dual specificity phosphatase 16
mm9_v1_chr12_-_86680251_86680341	0.098122	GAGAUGA	BC117972|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	BC117971|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	AJ489828|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	AK173323|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	NM_145138|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9
mm9_v1_chr2_+_154959216_154959300	0.0965659	GAGAUGA	NM_008395|Itch|16396|itchy, E3 ubiquitin protein ligase	AK082003|Itch|16396|itchy, E3 ubiquitin protein ligase	AK163006|Itch|16396|itchy, E3 ubiquitin protein ligase	AK141800|Itch|16396|itchy, E3 ubiquitin protein ligase	AK037940|Itch|16396|itchy, E3 ubiquitin protein ligase	BC062934|Itch|16396|itchy, E3 ubiquitin protein ligase	AK020167|Itch|16396|itchy, E3 ubiquitin protein ligase	AK220164|Itch|16396|itchy, E3 ubiquitin protein ligase	AK048303|Itch|16396|itchy, E3 ubiquitin protein ligase	BC064678|Itch|16396|itchy, E3 ubiquitin protein ligase	AF037454|Itch|16396|itchy, E3 ubiquitin protein ligase
mm9_v1_chrX_+_162608411_162608448	0.0963584	GAGAUGA	AK045118|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK160583|Gemin8|237221|gem (nuclear organelle) associated protein 8	NM_146238|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK085045|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK037580|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK047511|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK053774|Gemin8|237221|gem (nuclear organelle) associated protein 8
mm9_v1_chr18_-_80909796_80909814	0.0955983	GAGAUGA	BC061509|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK048610|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK144965|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164109|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164110|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_198429|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr1_+_140860285_140860402	0.0921293	GAGAUGA	NM_001166501|Dennd1b|329260|DENN/MADD domain containing 1B	BC042698|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr3_-_38383688_38383798	0.0913265	GAGAUGA	AK129484|Ankrd50|99696|ankyrin repeat domain 50	NM_001167883|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr2_+_4638844_4638934	0.090706	GAGAUGA	AK053896|Bend7|209645|BEN domain containing 7	NM_001190400|Bend7|209645|BEN domain containing 7	NM_178663|Bend7|209645|BEN domain containing 7	AK042822|Bend7|209645|BEN domain containing 7
mm9_v1_chr8_+_86479405_86479613	0.0892559	GAGAUGA	AK134906|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK005646|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK077005|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	BC003428|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	NM_024184|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK077718|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK150818|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK151951|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK165322|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)
mm9_v1_chr9_+_118515769_118515921	0.0881209	GAGAUGA	AJ344342|Itga9|104099|integrin alpha 9	NM_133721|Itga9|104099|integrin alpha 9	BC150824|Itga9|104099|integrin alpha 9
mm9_v1_chr5_-_36740713_36740796	0.0877656	GAGAUGA	BC138873|Sorcs2|81840|sortilin-related VPS10 domain containing receptor 2	BC138875|Sorcs2|81840|sortilin-related VPS10 domain containing receptor 2	AK053853|Sorcs2|81840|sortilin-related VPS10 domain containing receptor 2	AY004316|Sorcs2|81840|sortilin-related VPS10 domain containing receptor 2	AB093294|Sorcs2|81840|sortilin-related VPS10 domain containing receptor 2	AK047881|Sorcs2|81840|sortilin-related VPS10 domain containing receptor 2	NM_030889|Sorcs2|81840|sortilin-related VPS10 domain containing receptor 2
mm9_v1_chr11_-_102878371_102878504	0.087326	GAGAUGA	AK078460|Dcakd|68087|dephospho-CoA kinase domain containing	BC031855|Dcakd|68087|dephospho-CoA kinase domain containing	AK170762|Dcakd|68087|dephospho-CoA kinase domain containing	BC045193|Dcakd|68087|dephospho-CoA kinase domain containing	AK162069|Dcakd|68087|dephospho-CoA kinase domain containing	BC005607|Dcakd|68087|dephospho-CoA kinase domain containing	AK051022|Dcakd|68087|dephospho-CoA kinase domain containing	NM_026551|Dcakd|68087|dephospho-CoA kinase domain containing
mm9_v1_chr2_-_26207615_26207656	0.0872278	GAGAUGA	AK004089|Dnlz|52838|DNL-type zinc finger	AK142070|Dnlz|52838|DNL-type zinc finger	NM_001139503|Dnlz|52838|DNL-type zinc finger	NM_001139504|Dnlz|52838|DNL-type zinc finger	NM_026828|Dnlz|52838|DNL-type zinc finger
mm9_v1_chr15_-_102087673_102087947	0.0871551	GAGAUGA	M34476|Rarg|19411|retinoic acid receptor, gamma	X15848|Rarg|19411|retinoic acid receptor, gamma	M32068|Rarg|19411|retinoic acid receptor, gamma	BC012923|Rarg|19411|retinoic acid receptor, gamma	NM_011244|Rarg|19411|retinoic acid receptor, gamma	AK148064|Rarg|19411|retinoic acid receptor, gamma
mm9_v1_chr1_+_191552133_191552202	0.0869339	GAGAUGA	AK037646|Ptpn14|19250|protein tyrosine phosphatase, non-receptor type 14	NM_008976|Ptpn14|19250|protein tyrosine phosphatase, non-receptor type 14	AK086524|Ptpn14|19250|protein tyrosine phosphatase, non-receptor type 14	AK028783|Ptpn14|19250|protein tyrosine phosphatase, non-receptor type 14
mm9_v1_chr18_-_10029925_10030160	0.0866656	GAGAUGA	AB034633|Usp14|59025|ubiquitin specific peptidase 14	BC050197|Usp14|59025|ubiquitin specific peptidase 14	AK045909|Usp14|59025|ubiquitin specific peptidase 14	BC005571|Usp14|59025|ubiquitin specific peptidase 14	AK029977|Usp14|59025|ubiquitin specific peptidase 14	AK160215|Usp14|59025|ubiquitin specific peptidase 14	AK011322|Usp14|59025|ubiquitin specific peptidase 14	AK172477|Usp14|59025|ubiquitin specific peptidase 14	AK170933|Usp14|59025|ubiquitin specific peptidase 14	NM_001038589|Usp14|59025|ubiquitin specific peptidase 14	NM_021522|Usp14|59025|ubiquitin specific peptidase 14
mm9_v1_chr7_+_117365214_117365324	0.0863297	GAGAUGA	NM_009302|Swap70|20947|SWA-70 protein	AK146773|Swap70|20947|SWA-70 protein	AK045295|Swap70|20947|SWA-70 protein	AK041505|Swap70|20947|SWA-70 protein	AK019882|Swap70|20947|SWA-70 protein	BC065136|Swap70|20947|SWA-70 protein	AK172990|Swap70|20947|SWA-70 protein	AF053974|Swap70|20947|SWA-70 protein
mm9_v1_chr3_-_32264572_32264614	0.0855793	GAGAUGA	NM_009517|Zmat3|22401|zinc finger matrin type 3	BC023726|Zmat3|22401|zinc finger matrin type 3
mm9_v1_chr15_-_60656465_60656634	0.0853797	GAGAUGA	AK139928|Fam84b|399603|family with sequence similarity 84, member B	NM_001162926|Fam84b|399603|family with sequence similarity 84, member B
mm9_v1_chr4_-_139388882_139388882	0.0853074	GAGAUGA	AF254422|Pax7|18509|paired box gene 7	NM_011039|Pax7|18509|paired box gene 7
mm9_v1_chr15_+_99803210_99803320	0.0851966	GAGAUGA	NM_001024526|Larp4|207214|La ribonucleoprotein domain family, member 4	AK165392|Larp4|207214|La ribonucleoprotein domain family, member 4	AK172198|Larp4|207214|La ribonucleoprotein domain family, member 4	AK049756|Larp4|207214|La ribonucleoprotein domain family, member 4	BC075726|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr18_-_70212948_70213022	0.0843665	GAGAUGA	BC032928|Rab27b|80718|RAB27b, member RAS oncogene family	AB067775|Rab27b|80718|RAB27b, member RAS oncogene family	AF328893|Rab27b|80718|RAB27b, member RAS oncogene family	BC018443|Rab27b|80718|RAB27b, member RAS oncogene family	NM_030554|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr7_-_96666081_96666131	0.0835863	GAGAUGA	NM_029614|Prss23|76453|protease, serine, 23
mm9_v1_chr7_+_97591287_97591327	0.0835006	GAGAUGA	NM_145151|Crebzf|233490|CREB/ATF bZIP transcription factor
mm9_v1_chrX_-_154036606_154036649	0.0828232	GAGAUGA	AK148325|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	NM_172307|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr15_+_98465193_98465247	0.0824973	GAGAUGA	NM_007581|Cacnb3|12297|calcium channel, voltage-dependent, beta 3 subunit	AK148088|Cacnb3|12297|calcium channel, voltage-dependent, beta 3 subunit
mm9_v1_chr2_-_84490827_84490896	0.0821672	GAGAUGA	BC054544|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	BC043108|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK161790|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK164485|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK168453|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085448|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085449|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085450|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_007615|Ctnnd1|12388|catenin (cadherin associated protein), delta 1
mm9_v1_chr16_-_10993155_10993281	0.0819144	GAGAUGA	AK159533|Litaf|56722|LPS-induced TN factor	AF171100|Litaf|56722|LPS-induced TN factor	BC018559|Litaf|56722|LPS-induced TN factor	AK018578|Litaf|56722|LPS-induced TN factor	AK078708|Litaf|56722|LPS-induced TN factor	AK151053|Litaf|56722|LPS-induced TN factor	NM_019980|Litaf|56722|LPS-induced TN factor	AK076162|Litaf|56722|LPS-induced TN factor
mm9_v1_chr4_-_114659706_114659870	0.0816987	GAGAUGA	AK004827|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK146436|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK002526|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	BC017684|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK162173|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK150162|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	NM_025647|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK077534|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1
mm9_v1_chr5_-_38108301_38108391	0.0809732	GAGAUGA	BC052404|Stk32b|64293|serine/threonine kinase 32B	BC058412|Stk32b|64293|serine/threonine kinase 32B	BC056396|Stk32b|64293|serine/threonine kinase 32B	AK082468|Stk32b|64293|serine/threonine kinase 32B	NM_022416|Stk32b|64293|serine/threonine kinase 32B
mm9_v1_chr12_+_66176588_66176613	0.0805769	GAGAUGA	AK039944|Fancm|104806|Fanconi anemia, complementation group M	AK084697|Fancm|104806|Fanconi anemia, complementation group M	AK086395|Fancm|104806|Fanconi anemia, complementation group M	AK050306|Fancm|104806|Fanconi anemia, complementation group M	NM_178912|Fancm|104806|Fanconi anemia, complementation group M	AK053715|Fancm|104806|Fanconi anemia, complementation group M	BC150785|Fancm|104806|Fanconi anemia, complementation group M	AK173211|Fancm|104806|Fanconi anemia, complementation group M
mm9_v1_chr3_+_62142698_62142868	0.080514	GAGAUGA	NM_001081295|Arhgef26|622434|Rho guanine nucleotide exchange factor (GEF) 26
mm9_v1_chr9_+_69245718_69245804	0.0796142	GAGAUGA	AK163917|Narg2|93697|NMDA receptor-regulated gene 2	AK042916|Narg2|93697|NMDA receptor-regulated gene 2	AK046121|Narg2|93697|NMDA receptor-regulated gene 2	AK041772|Narg2|93697|NMDA receptor-regulated gene 2	AK134186|Narg2|93697|NMDA receptor-regulated gene 2	AY244558|Narg2|93697|NMDA receptor-regulated gene 2	BC068183|Narg2|93697|NMDA receptor-regulated gene 2	NM_145618|Narg2|93697|NMDA receptor-regulated gene 2
mm9_v1_chr19_-_28085534_28085655	0.079154	GAGAUGA	AK030008|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	AK140928|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	BC017598|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	AK041120|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	NM_011265|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)
mm9_v1_chr1_-_12980994_12981257	0.0787301	GAGAUGA	BC117943|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	BC117944|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK048882|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK041736|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	NM_172841|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK028758|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1
mm9_v1_chr8_+_107800316_107800347	0.0784024	GAGAUGA	AK079536|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	BC027290|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AY459322|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AK053846|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	NM_030152|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm9_v1_chr10_-_101953046_101953066	0.0783488	GAGAUGA	AF304160|Nts|67405|neurotensin	BC043024|Nts|67405|neurotensin	NM_024435|Nts|67405|neurotensin	AK017202|Nts|67405|neurotensin	AK017212|Nts|67405|neurotensin
mm9_v1_chr11_-_81781897_81781910	0.0779607	GAGAUGA	NM_001034013|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	AK134778|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	AF348465|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)
mm9_v1_chr6_+_42214999_42215177	0.0773278	GAGAUGA	NM_007610|Casp2|12366|caspase 2	Y13085|Casp2|12366|caspase 2	BC034262|Casp2|12366|caspase 2	AK170649|Casp2|12366|caspase 2	AK052396|Casp2|12366|caspase 2	AK133829|Casp2|12366|caspase 2	AK042072|Casp2|12366|caspase 2	D28492|Casp2|12366|caspase 2	AK199368|Casp2|12366|caspase 2	AK210521|Casp2|12366|caspase 2
mm9_v1_chr8_-_108282498_108282528	0.075329	GAGAUGA	AK017684|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2	AK141521|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2	NM_027469|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2	BC013623|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2
mm9_v1_chr4_-_131631226_131631229	0.0751582	GAGAUGA	NM_001128607|Epb4.1|269587|erythrocyte protein band 4.1
mm9_v1_chr3_+_66789587_66789619	0.0749958	GAGAUGA	AK012100|Rsrc1|66880|arginine/serine-rich coiled-coil 1	NM_025822|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK005242|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK043731|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK045433|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr3_-_57379600_57379797	0.0739725	GAGAUGA	AK213529|Wwtr1|97064|WW domain containing transcription regulator 1	BC004640|Wwtr1|97064|WW domain containing transcription regulator 1	AK142720|Wwtr1|97064|WW domain containing transcription regulator 1	AK009983|Wwtr1|97064|WW domain containing transcription regulator 1	AJ299430|Wwtr1|97064|WW domain containing transcription regulator 1	BC014727|Wwtr1|97064|WW domain containing transcription regulator 1	AK011504|Wwtr1|97064|WW domain containing transcription regulator 1	NM_133784|Wwtr1|97064|WW domain containing transcription regulator 1
mm9_v1_chr15_-_96529998_96530181	0.0738515	GAGAUGA	BC041108|Slc38a2|67760|solute carrier family 38, member 2	BC027259|Slc38a2|67760|solute carrier family 38, member 2	AK129342|Slc38a2|67760|solute carrier family 38, member 2	BC048178|Slc38a2|67760|solute carrier family 38, member 2	NM_175121|Slc38a2|67760|solute carrier family 38, member 2	AK017145|Slc38a2|67760|solute carrier family 38, member 2	AK030917|Slc38a2|67760|solute carrier family 38, member 2	AK031615|Slc38a2|67760|solute carrier family 38, member 2	AK047403|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr7_+_3645211_3645410	0.0728346	GAGAUGA	NM_001164204|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	NM_001164205|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK002684|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK003757|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)
mm9_v1_chr1_-_36301093_36301156	0.0726447	GAGAUGA	BC062936|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	BC068283|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK050532|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	NM_198899|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr1_-_145624156_145624181	0.0718409	GAGAUGA	AK076167|Trove2|20822|TROVE domain family, member 2	NM_013835|Trove2|20822|TROVE domain family, member 2
mm9_v1_chr9_-_100386803_100386891	0.0718256	GAGAUGA	BC107263|Il20rb|213208|interleukin 20 receptor beta	BC107264|Il20rb|213208|interleukin 20 receptor beta	BC148190|Il20rb|213208|interleukin 20 receptor beta	NM_001033543|Il20rb|213208|interleukin 20 receptor beta
mm9_v1_chr11_+_105153956_105154033	0.0713983	GAGAUGA	AK054150|Mrc2|17534|mannose receptor, C type 2	NM_008626|Mrc2|17534|mannose receptor, C type 2	AK028157|Mrc2|17534|mannose receptor, C type 2	U56734|Mrc2|17534|mannose receptor, C type 2	BC116642|Mrc2|17534|mannose receptor, C type 2
mm9_v1_chr8_+_23970006_23970020	0.0710046	GAGAUGA	AK028058|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK082463|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	NM_001081149|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK039615|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK036885|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK054322|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK132474|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK143408|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3
mm9_v1_chr4_-_118862555_118862615	0.0708732	GAGAUGA	BC063257|Ermap|27028|erythroblast membrane-associated protein	AF153906|Ermap|27028|erythroblast membrane-associated protein	AK036702|Ermap|27028|erythroblast membrane-associated protein	AK158114|Ermap|27028|erythroblast membrane-associated protein	AK137510|Ermap|27028|erythroblast membrane-associated protein	NM_013848|Ermap|27028|erythroblast membrane-associated protein
mm9_v1_chr11_+_87881747_87881842	0.0706292	GAGAUGA	AF104410|Vezf1|22344|vascular endothelial zinc finger 1	NM_016686|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr15_+_80778910_80778973	0.0705301	GAGAUGA	AK171725|Adsl|11564|adenylosuccinate lyase	BC020187|Adsl|11564|adenylosuccinate lyase	U20225|Adsl|11564|adenylosuccinate lyase	AK049372|Adsl|11564|adenylosuccinate lyase	AK051111|Adsl|11564|adenylosuccinate lyase	AK152092|Adsl|11564|adenylosuccinate lyase	NM_009634|Adsl|11564|adenylosuccinate lyase	AK166019|Adsl|11564|adenylosuccinate lyase	AK168906|Adsl|11564|adenylosuccinate lyase	AK170216|Adsl|11564|adenylosuccinate lyase
mm9_v1_chrX_+_135751704_135751704	0.0704037	GAGAUGA	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr3_-_142544883_142544984	0.0695438	GAGAUGA	AK046248|Pkn2|109333|protein kinase N2	AK171092|Pkn2|109333|protein kinase N2	BC052073|Pkn2|109333|protein kinase N2	AK077910|Pkn2|109333|protein kinase N2	AK028469|Pkn2|109333|protein kinase N2	AK049713|Pkn2|109333|protein kinase N2	AK133298|Pkn2|109333|protein kinase N2	NM_178654|Pkn2|109333|protein kinase N2
mm9_v1_chr7_+_117205194_117205269	0.0681357	GAGAUGA	NM_009281|Zfp143|20841|zinc finger protein 143	AK028056|Zfp143|20841|zinc finger protein 143	AK029078|Zfp143|20841|zinc finger protein 143	BC037658|Zfp143|20841|zinc finger protein 143	AF011758|Zfp143|20841|zinc finger protein 143
mm9_v1_chr7_-_117129702_117129846	0.0677663	GAGAUGA	AK038953|Tmem41b|233724|transmembrane protein 41B	AK165226|Tmem41b|233724|transmembrane protein 41B	AK075726|Tmem41b|233724|transmembrane protein 41B	AK029327|Tmem41b|233724|transmembrane protein 41B	AK053588|Tmem41b|233724|transmembrane protein 41B	AK078357|Tmem41b|233724|transmembrane protein 41B	AK090100|Tmem41b|233724|transmembrane protein 41B	AK139961|Tmem41b|233724|transmembrane protein 41B	AK166427|Tmem41b|233724|transmembrane protein 41B	AK166455|Tmem41b|233724|transmembrane protein 41B	NM_153525|Tmem41b|233724|transmembrane protein 41B	BC027103|Tmem41b|233724|transmembrane protein 41B	AK172876|Tmem41b|233724|transmembrane protein 41B	BC026515|Tmem41b|233724|transmembrane protein 41B	AK033997|Tmem41b|233724|transmembrane protein 41B	AK035266|Tmem41b|233724|transmembrane protein 41B	AK162557|Tmem41b|233724|transmembrane protein 41B	AK150353|Tmem41b|233724|transmembrane protein 41B	AK153048|Tmem41b|233724|transmembrane protein 41B
mm9_v1_chr15_+_83610434_83610456	0.0676674	GAGAUGA	AK048421|Mpped1|223726|metallophosphoesterase domain containing 1	NM_172610|Mpped1|223726|metallophosphoesterase domain containing 1
mm9_v1_chr15_-_50721552_50721725	0.066722	GAGAUGA	BC099962|Trps1|83925|trichorhinophalangeal syndrome I (human)	AF346836|Trps1|83925|trichorhinophalangeal syndrome I (human)	NM_032000|Trps1|83925|trichorhinophalangeal syndrome I (human)
mm9_v1_chrX_-_96086314_96086363	0.0665455	GAGAUGA	AK031419|Ophn1|94190|oligophrenin 1	AK036038|Ophn1|94190|oligophrenin 1	AK043239|Ophn1|94190|oligophrenin 1	AK048153|Ophn1|94190|oligophrenin 1	AK166392|Ophn1|94190|oligophrenin 1	NM_052976|Ophn1|94190|oligophrenin 1	AK039304|Ophn1|94190|oligophrenin 1
mm9_v1_chr11_-_95448869_95449017	0.0664866	GAGAUGA	AF105292|Ngfr|18053|nerve growth factor receptor (TNFR superfamily, member 16)	BC038365|Ngfr|18053|nerve growth factor receptor (TNFR superfamily, member 16)	AK037248|Ngfr|18053|nerve growth factor receptor (TNFR superfamily, member 16)	NM_033217|Ngfr|18053|nerve growth factor receptor (TNFR superfamily, member 16)
mm9_v1_chr15_-_103045710_103045798	0.0664531	GAGAUGA	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr9_+_37421361_37421439	0.0655381	GAGAUGA	AK028598|Siae|22619|sialic acid acetylesterase	AK165103|Siae|22619|sialic acid acetylesterase	AK043392|Siae|22619|sialic acid acetylesterase	AK167103|Siae|22619|sialic acid acetylesterase	AK164852|Siae|22619|sialic acid acetylesterase	U40408|Siae|22619|sialic acid acetylesterase	AK028656|Siae|22619|sialic acid acetylesterase	NM_011734|Siae|22619|sialic acid acetylesterase	U61183|Siae|22619|sialic acid acetylesterase	X98625|Siae|22619|sialic acid acetylesterase	BC007136|Siae|22619|sialic acid acetylesterase
mm9_v1_chr5_-_9161670_9161791	0.0649644	GAGAUGA	AK046201|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK078015|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	BC060109|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK029147|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK031887|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	BC045141|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	BC010272|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	U70017|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK040107|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK145803|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK033208|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK039563|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK030508|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK160595|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	NM_001110327|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	NM_011806|Dmtf1|23857|cyclin D binding myb-like transcription factor 1
mm9_v1_chr2_+_92025639_92025639	0.0647189	GAGAUGA	AK037174|Phf21a|192285|PHD finger protein 21A	NM_001109691|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr1_+_196446006_196446022	0.0644013	GAGAUGA	NM_008882|Plxna2|18845|plexin A2
mm9_v1_chr11_+_86940545_86940631	0.0643291	GAGAUGA	AK140822|Trim37|68729|tripartite motif-containing 37	BC058678|Trim37|68729|tripartite motif-containing 37	NM_197987|Trim37|68729|tripartite motif-containing 37	BC078416|Trim37|68729|tripartite motif-containing 37	BC059070|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr3_+_40549475_40549540	0.0639672	GAGAUGA	BC012712|Hspa4l|18415|heat shock protein 4 like	AK144225|Hspa4l|18415|heat shock protein 4 like	AK032066|Hspa4l|18415|heat shock protein 4 like	BC110662|Hspa4l|18415|heat shock protein 4 like	BC057002|Hspa4l|18415|heat shock protein 4 like	NM_011020|Hspa4l|18415|heat shock protein 4 like	D49482|Hspa4l|18415|heat shock protein 4 like
mm9_v1_chr19_+_37281988_37282110	0.0637614	GAGAUGA	AK009364|March5|69104|membrane-associated ring finger (C3HC4) 5	NM_001164336|March5|69104|membrane-associated ring finger (C3HC4) 5	NM_001164337|March5|69104|membrane-associated ring finger (C3HC4) 5	NM_027314|March5|69104|membrane-associated ring finger (C3HC4) 5	AK009232|March5|69104|membrane-associated ring finger (C3HC4) 5	AK021403|March5|69104|membrane-associated ring finger (C3HC4) 5
mm9_v1_chr10_-_36858671_36858801	0.0635182	GAGAUGA	BC046601|Marcks|17118|myristoylated alanine rich protein kinase C substrate	M60474|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC002068|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC039911|Marcks|17118|myristoylated alanine rich protein kinase C substrate	NM_008538|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr4_+_147413185_147413279	0.063503	GAGAUGA	AF404271|Mthfr|17769|5,10-methylenetetrahydrofolate reductase	NM_010840|Mthfr|17769|5,10-methylenetetrahydrofolate reductase	AK030192|Mthfr|17769|5,10-methylenetetrahydrofolate reductase	AF404272|Mthfr|17769|5,10-methylenetetrahydrofolate reductase
mm9_v1_chr12_+_112404645_112404765	0.0628557	GAGAUGA	AK147304|Traf3|22031|TNF receptor-associated factor 3	NM_001048206|Traf3|22031|TNF receptor-associated factor 3	NM_011632|Traf3|22031|TNF receptor-associated factor 3	U21050|Traf3|22031|TNF receptor-associated factor 3
mm9_v1_chr5_+_67651890_67652024	0.062314	GAGAUGA	AK012413|Tmem33|67878|transmembrane protein 33	NM_028975|Tmem33|67878|transmembrane protein 33	NM_030108|Tmem33|67878|transmembrane protein 33	AK032555|Tmem33|67878|transmembrane protein 33	AK005493|Tmem33|67878|transmembrane protein 33	AK007750|Tmem33|67878|transmembrane protein 33	AK017281|Tmem33|67878|transmembrane protein 33	AK153441|Tmem33|67878|transmembrane protein 33	AK007607|Tmem33|67878|transmembrane protein 33	BC005562|Tmem33|67878|transmembrane protein 33	AK165369|Tmem33|67878|transmembrane protein 33
mm9_v1_chrX_-_75829120_75829237	0.0620267	GAGAUGA	BC032926|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	NM_001164275|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK008151|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK083396|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK135895|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK161802|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	NM_027322|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1
mm9_v1_chr16_-_50432421_50432504	0.0611437	GAGAUGA	AK044855|Bbx|70508|bobby sox homolog (Drosophila)	BC019456|Bbx|70508|bobby sox homolog (Drosophila)	BC066821|Bbx|70508|bobby sox homolog (Drosophila)	AF276951|Bbx|70508|bobby sox homolog (Drosophila)	BC064763|Bbx|70508|bobby sox homolog (Drosophila)	BC057869|Bbx|70508|bobby sox homolog (Drosophila)	AK157813|Bbx|70508|bobby sox homolog (Drosophila)	AK049516|Bbx|70508|bobby sox homolog (Drosophila)	AF454943|Bbx|70508|bobby sox homolog (Drosophila)	AK017487|Bbx|70508|bobby sox homolog (Drosophila)	AK029747|Bbx|70508|bobby sox homolog (Drosophila)	AK167724|Bbx|70508|bobby sox homolog (Drosophila)	NM_027444|Bbx|70508|bobby sox homolog (Drosophila)
mm9_v1_chr5_-_89104575_89104676	0.0609584	GAGAUGA	AK168385|Grsf1|231413|G-rich RNA sequence binding factor 1	AK168459|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_001098476|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr10_+_120802099_120802365	0.0609555	GAGAUGA	AK040524|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK049162|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK054046|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	NM_029364|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK030773|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK135016|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK170791|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	BC055328|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK087265|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK149863|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK165917|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK169485|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK165180|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK164907|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK083597|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK159562|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK197322|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK200155|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK205939|Gns|75612|glucosamine (N-acetyl)-6-sulfatase
mm9_v1_chr8_+_98157458_98157482	0.0609397	GAGAUGA	AK019225|Gins3|78833|GINS complex subunit 3 (Psf3 homolog)	AK160606|Gins3|78833|GINS complex subunit 3 (Psf3 homolog)	NM_030198|Gins3|78833|GINS complex subunit 3 (Psf3 homolog)	BC039794|Gins3|78833|GINS complex subunit 3 (Psf3 homolog)	BC064746|Gins3|78833|GINS complex subunit 3 (Psf3 homolog)
mm9_v1_chr7_+_108257288_108257396	0.0599161	GAGAUGA	AK141949|Fchsd2|207278|FCH and double SH3 domains 2	NM_001146010|Fchsd2|207278|FCH and double SH3 domains 2	NM_199012|Fchsd2|207278|FCH and double SH3 domains 2	BC016532|Fchsd2|207278|FCH and double SH3 domains 2	AK140322|Fchsd2|207278|FCH and double SH3 domains 2	AK157054|Fchsd2|207278|FCH and double SH3 domains 2	AK156841|Fchsd2|207278|FCH and double SH3 domains 2	BC060647|Fchsd2|207278|FCH and double SH3 domains 2	AK165341|Fchsd2|207278|FCH and double SH3 domains 2	AK122368|Fchsd2|207278|FCH and double SH3 domains 2
mm9_v1_chrX_-_137135022_137135060	0.0598391	GAGAUGA	AF201289|Tsc22d3|14605|TSC22 domain family, member 3	EU818782|Tsc22d3|14605|TSC22 domain family, member 3	NM_001077364|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr4_-_104548965_104549005	0.0580662	GAGAUGA	AB077296|C8a|230558|complement component 8, alpha polypeptide	AB077297|C8a|230558|complement component 8, alpha polypeptide	AB077298|C8a|230558|complement component 8, alpha polypeptide	BC027748|C8a|230558|complement component 8, alpha polypeptide	AK090245|C8a|230558|complement component 8, alpha polypeptide	AB077295|C8a|230558|complement component 8, alpha polypeptide	NM_146148|C8a|230558|complement component 8, alpha polypeptide
mm9_v1_chr12_-_47919695_47919761	0.057972	GAGAUGA	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr8_+_86132073_86132203	0.0578547	GAGAUGA	NM_018808|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1	AB028272|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1	AK146657|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1	AK164392|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1	AK168220|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1	AK168291|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1	AK002290|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1	AK160924|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1	AK167718|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1	BC012962|Dnajb1|81489|DnaJ (Hsp40) homolog, subfamily B, member 1
mm9_v1_chr3_+_157699644_157699694	0.0573758	GAGAUGA	AK152244|Lrrc40|67144|leucine rich repeat containing 40	AK011726|Lrrc40|67144|leucine rich repeat containing 40	AK170052|Lrrc40|67144|leucine rich repeat containing 40	AK034978|Lrrc40|67144|leucine rich repeat containing 40	NM_024194|Lrrc40|67144|leucine rich repeat containing 40	AK017814|Lrrc40|67144|leucine rich repeat containing 40	AK163288|Lrrc40|67144|leucine rich repeat containing 40	AK148748|Lrrc40|67144|leucine rich repeat containing 40
mm9_v1_chr13_+_114584715_114584832	0.0570568	GAGAUGA	NM_172595|Arl15|218639|ADP-ribosylation factor-like 15	AK039965|Arl15|218639|ADP-ribosylation factor-like 15	AK052164|Arl15|218639|ADP-ribosylation factor-like 15	AK053953|Arl15|218639|ADP-ribosylation factor-like 15	AK050979|Arl15|218639|ADP-ribosylation factor-like 15	BC120664|Arl15|218639|ADP-ribosylation factor-like 15	BC120666|Arl15|218639|ADP-ribosylation factor-like 15	BC144993|Arl15|218639|ADP-ribosylation factor-like 15	AK048736|Arl15|218639|ADP-ribosylation factor-like 15
mm9_v1_chr2_-_131178551_131178627	0.0559063	GAGAUGA	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr5_-_31210054_31210143	0.0553017	GAGAUGA	BC082316|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK002453|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK005413|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK009384|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK010297|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	NM_001134692|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	BC002177|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK019285|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK002224|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK003569|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chr12_-_52792851_52792915	0.0550116	GAGAUGA	BC138055|Strn3|94186|striatin, calmodulin binding protein 3	BC145127|Strn3|94186|striatin, calmodulin binding protein 3	AF307777|Strn3|94186|striatin, calmodulin binding protein 3	EF685152|Strn3|94186|striatin, calmodulin binding protein 3	AK139183|Strn3|94186|striatin, calmodulin binding protein 3	AK140447|Strn3|94186|striatin, calmodulin binding protein 3	AK164967|Strn3|94186|striatin, calmodulin binding protein 3	NM_001172098|Strn3|94186|striatin, calmodulin binding protein 3	NM_052973|Strn3|94186|striatin, calmodulin binding protein 3
mm9_v1_chr10_-_4707228_4707322	0.0545762	GAGAUGA	BC089511|Vip|22353|vasoactive intestinal polypeptide	AK018599|Vip|22353|vasoactive intestinal polypeptide	NM_011702|Vip|22353|vasoactive intestinal polypeptide
mm9_v1_chr16_+_31664022_31664124	0.0541247	GAGAUGA	AK220189|Dlg1|13383|discs, large homolog 1 (Drosophila)	BC057118|Dlg1|13383|discs, large homolog 1 (Drosophila)	NM_007862|Dlg1|13383|discs, large homolog 1 (Drosophila)
mm9_v1_chrX_+_70587906_70588053	0.0540974	GAGAUGA	NM_031494|Zfp275|27081|zinc finger protein 275	AK142957|Zfp275|27081|zinc finger protein 275	NM_001160229|Zfp275|27081|zinc finger protein 275	BC138002|Zfp275|27081|zinc finger protein 275	BC138003|Zfp275|27081|zinc finger protein 275
mm9_v1_chr4_+_101169252_101169283	0.0539849	GAGAUGA	NM_198412|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	BC064460|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr3_-_104764503_104764638	0.0538481	GAGAUGA	AF070988|Wnt2b|22414|wingless related MMTV integration site 2b	BC119276|Wnt2b|22414|wingless related MMTV integration site 2b	BC119278|Wnt2b|22414|wingless related MMTV integration site 2b	AK035653|Wnt2b|22414|wingless related MMTV integration site 2b	NM_009520|Wnt2b|22414|wingless related MMTV integration site 2b
mm9_v1_chr4_+_19935558_19935623	0.0533895	GAGAUGA	AK050374|Ttpa|50500|tocopherol (alpha) transfer protein	BC099869|Ttpa|50500|tocopherol (alpha) transfer protein	BC099870|Ttpa|50500|tocopherol (alpha) transfer protein	BC099871|Ttpa|50500|tocopherol (alpha) transfer protein	NM_015767|Ttpa|50500|tocopherol (alpha) transfer protein	BC099868|Ttpa|50500|tocopherol (alpha) transfer protein	AF218416|Ttpa|50500|tocopherol (alpha) transfer protein	AK004882|Ttpa|50500|tocopherol (alpha) transfer protein
mm9_v1_chr1_+_70772288_70772496	0.0530732	GAGAUGA	BC094541|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	NM_177164|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK083856|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	BC064448|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK080585|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like
mm9_v1_chrX_+_97969784_97969833	0.0529839	GAGAUGA	NM_001177779|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chr12_+_3426883_3427022	0.0513565	GAGAUGA	AK080679|Asxl2|75302|additional sex combs like 2 (Drosophila)	NM_172421|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK036839|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK142135|Asxl2|75302|additional sex combs like 2 (Drosophila)	BC141140|Asxl2|75302|additional sex combs like 2 (Drosophila)
mm9_v1_chr2_+_33071451_33071671	0.0498816	GAGAUGA	AK155464|Angptl2|26360|angiopoietin-like 2	NM_011923|Angptl2|26360|angiopoietin-like 2	AK037265|Angptl2|26360|angiopoietin-like 2	AK011976|Angptl2|26360|angiopoietin-like 2	BC138609|Angptl2|26360|angiopoietin-like 2	BC138610|Angptl2|26360|angiopoietin-like 2
mm9_v1_chr9_-_71959599_71959699	0.0498137	GAGAUGA	M97635|Tcf12|21406|transcription factor 12	BC037097|Tcf12|21406|transcription factor 12	AK143246|Tcf12|21406|transcription factor 12	NM_011544|Tcf12|21406|transcription factor 12	AK169800|Tcf12|21406|transcription factor 12
mm9_v1_chr19_+_45438212_45438344	0.0497703	GAGAUGA	NM_001037758|Btrc|12234|beta-transducin repeat containing protein	NM_009771|Btrc|12234|beta-transducin repeat containing protein	AK220183|Btrc|12234|beta-transducin repeat containing protein	AK145624|Btrc|12234|beta-transducin repeat containing protein	AK052317|Btrc|12234|beta-transducin repeat containing protein	AK083257|Btrc|12234|beta-transducin repeat containing protein	AF081887|Btrc|12234|beta-transducin repeat containing protein	AK032221|Btrc|12234|beta-transducin repeat containing protein	AK145091|Btrc|12234|beta-transducin repeat containing protein	BC052879|Btrc|12234|beta-transducin repeat containing protein	BC003989|Btrc|12234|beta-transducin repeat containing protein	AF099932|Btrc|12234|beta-transducin repeat containing protein	AF110396|Btrc|12234|beta-transducin repeat containing protein	AF112979|Btrc|12234|beta-transducin repeat containing protein	AK180045|Btrc|12234|beta-transducin repeat containing protein	AK188552|Btrc|12234|beta-transducin repeat containing protein	AK189588|Btrc|12234|beta-transducin repeat containing protein
mm9_v1_chrX_+_132758579_132758588	0.0495673	GAGAUGA	NM_001127169|Tceal7|100040972|transcription elongation factor A (SII)-like 7	AK003800|Tceal7|100040972|transcription elongation factor A (SII)-like 7
mm9_v1_chr18_+_73732352_73732560	0.0488447	GAGAUGA	NM_001039214|Mex3c|240396|mex3 homolog C (C. elegans)	AK133686|Mex3c|240396|mex3 homolog C (C. elegans)
mm9_v1_chr19_+_10257363_10257524	0.0488355	GAGAUGA	NM_146094|Fads1|76267|fatty acid desaturase 1	BC026831|Fads1|76267|fatty acid desaturase 1	AK154367|Fads1|76267|fatty acid desaturase 1	BC022139|Fads1|76267|fatty acid desaturase 1	BC026848|Fads1|76267|fatty acid desaturase 1	AB072976|Fads1|76267|fatty acid desaturase 1	AK080706|Fads1|76267|fatty acid desaturase 1	AF061504|Fads1|76267|fatty acid desaturase 1	AK083959|Fads1|76267|fatty acid desaturase 1	BC063053|Fads1|76267|fatty acid desaturase 1
mm9_v1_chr19_-_5488150_5488373	0.0484839	GAGAUGA	AF425647|Mus81|71711|MUS81 endonuclease homolog (yeast)	AK145858|Mus81|71711|MUS81 endonuclease homolog (yeast)	AK168514|Mus81|71711|MUS81 endonuclease homolog (yeast)	NM_027877|Mus81|71711|MUS81 endonuclease homolog (yeast)	BC026560|Mus81|71711|MUS81 endonuclease homolog (yeast)
mm9_v1_chr17_+_87682206_87682305	0.0483289	GAGAUGA	AK040578|Ttc7|225049|tetratricopeptide repeat domain 7	NM_028639|Ttc7|225049|tetratricopeptide repeat domain 7	AK050263|Ttc7|225049|tetratricopeptide repeat domain 7	AK090252|Ttc7|225049|tetratricopeptide repeat domain 7	AK153704|Ttc7|225049|tetratricopeptide repeat domain 7	AK080284|Ttc7|225049|tetratricopeptide repeat domain 7	AK040610|Ttc7|225049|tetratricopeptide repeat domain 7	AK004107|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr6_+_86992796_86992906	0.047755	GAGAUGA	AK087173|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	NM_013528|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK019852|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK039792|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC050762|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AF334736|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC010516|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr1_+_159436875_159436945	0.0476235	GAGAUGA	NM_033354|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	BC059194|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	AK173302|Sec16b|89867|SEC16 homolog B (S. cerevisiae)
mm9_v1_chr6_-_126690651_126690691	0.0472539	GAGAUGA	NM_013568|Kcna6|16494|potassium voltage-gated channel, shaker-related, subfamily, member 6
mm9_v1_chr18_-_70301202_70301243	0.0471838	GAGAUGA	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr10_-_116585527_116585608	0.047022	GAGAUGA	BC043109|Frs2|327826|fibroblast growth factor receptor substrate 2	NM_177798|Frs2|327826|fibroblast growth factor receptor substrate 2	AK028813|Frs2|327826|fibroblast growth factor receptor substrate 2	AK163442|Frs2|327826|fibroblast growth factor receptor substrate 2	BC055334|Frs2|327826|fibroblast growth factor receptor substrate 2	AK138144|Frs2|327826|fibroblast growth factor receptor substrate 2
mm9_v1_chr7_-_112900699_112900744	0.0468947	GAGAUGA	AJ011912|Tpp1|12751|tripeptidyl peptidase I	BC024820|Tpp1|12751|tripeptidyl peptidase I	AK170781|Tpp1|12751|tripeptidyl peptidase I	AK146759|Tpp1|12751|tripeptidyl peptidase I	AK048279|Tpp1|12751|tripeptidyl peptidase I	NM_009906|Tpp1|12751|tripeptidyl peptidase I	AK083832|Tpp1|12751|tripeptidyl peptidase I	AK169924|Tpp1|12751|tripeptidyl peptidase I	AF111172|Tpp1|12751|tripeptidyl peptidase I	AK155021|Tpp1|12751|tripeptidyl peptidase I	AK002418|Tpp1|12751|tripeptidyl peptidase I	AK165669|Tpp1|12751|tripeptidyl peptidase I
mm9_v1_chr4_+_147415297_147415395	0.0466125	GAGAUGA	AK150159|Mthfr|17769|5,10-methylenetetrahydrofolate reductase	NM_001161798|Mthfr|17769|5,10-methylenetetrahydrofolate reductase	AK149795|Mthfr|17769|5,10-methylenetetrahydrofolate reductase	BC052466|Mthfr|17769|5,10-methylenetetrahydrofolate reductase	AF404273|Mthfr|17769|5,10-methylenetetrahydrofolate reductase	BC051017|Mthfr|17769|5,10-methylenetetrahydrofolate reductase
mm9_v1_chr11_+_66725482_66725594	0.045376	GAGAUGA	AK051285|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK041182|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK051645|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	NM_178656|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK084056|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK051158|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	BC147296|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	BC147297|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels
mm9_v1_chr4_-_147818818_147818893	0.0452317	GAGAUGA	BC071203|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK004550|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK078442|Ubiad1|71707|UbiA prenyltransferase domain containing 1	NM_027873|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK034787|Ubiad1|71707|UbiA prenyltransferase domain containing 1
mm9_v1_chr14_-_56364421_56364522	0.0451878	GAGAUGA	BC003930|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	BC023825|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK159964|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK146317|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK168147|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK168115|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	NM_026819|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1
mm9_v1_chr9_-_45792865_45792953	0.0451635	GAGAUGA	AK164573|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK012116|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	U57747|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK012164|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC003771|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	BC002037|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	BC056211|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	AK011326|2610005M20Rik|70308|RIKEN cDNA 2610005M20 gene	AK153424|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2	NM_008775|Pafah1b2|18475|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm9_v1_chr15_+_54402914_54402981	0.0444388	GAGAUGA	NM_178920|Mal2|105853|mal, T-cell differentiation protein 2
mm9_v1_chr11_+_115048783_115048880	0.0443621	GAGAUGA	NM_001033393|Tmem104|320534|transmembrane protein 104	AK171314|Tmem104|320534|transmembrane protein 104	AK155041|Tmem104|320534|transmembrane protein 104	AK040894|Tmem104|320534|transmembrane protein 104	AK171457|Tmem104|320534|transmembrane protein 104	AK167098|Tmem104|320534|transmembrane protein 104	AK049868|Tmem104|320534|transmembrane protein 104	BC140976|Tmem104|320534|transmembrane protein 104
mm9_v1_chr6_+_4853319_4853431	0.0438906	GAGAUGA	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr4_-_120498198_120498325	0.0435757	GAGAUGA	AK156353|Nfyc|18046|nuclear transcription factor-Y gamma	BC020117|Nfyc|18046|nuclear transcription factor-Y gamma	BC085261|Nfyc|18046|nuclear transcription factor-Y gamma	AK011327|Nfyc|18046|nuclear transcription factor-Y gamma	NM_008692|Nfyc|18046|nuclear transcription factor-Y gamma
mm9_v1_chr6_+_49269351_49269403	0.0431538	GAGAUGA	AK018135|Ccdc126|57895|coiled-coil domain containing 126	NM_175098|Ccdc126|57895|coiled-coil domain containing 126	BC117837|Ccdc126|57895|coiled-coil domain containing 126
mm9_v1_chr19_-_38199291_38199302	0.0431431	GAGAUGA	AK004839|Rbp4|19662|retinol binding protein 4, plasma	AK008765|Rbp4|19662|retinol binding protein 4, plasma	NM_011255|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr18_+_69505374_69505487	0.0424635	GAGAUGA	NM_001083967|Tcf4|21413|transcription factor 4	AK081012|Tcf4|21413|transcription factor 4	AK145285|Tcf4|21413|transcription factor 4	AK028748|Tcf4|21413|transcription factor 4	S75870|Tcf4|21413|transcription factor 4
mm9_v1_chr2_-_28771940_28771959	0.0421166	GAGAUGA	NM_019446|Barhl1|54422|BarH-like 1 (Drosophila)	AB043980|Barhl1|54422|BarH-like 1 (Drosophila)	BC055731|Barhl1|54422|BarH-like 1 (Drosophila)	NM_001164186|Barhl1|54422|BarH-like 1 (Drosophila)
mm9_v1_chr1_-_140753398_140753430	0.0417235	GAGAUGA	AK141677|2310009B15Rik|69549|RIKEN cDNA 2310009B15 gene	NM_001081226|2310009B15Rik|69549|RIKEN cDNA 2310009B15 gene
mm9_v1_chr11_+_76759157_76759353	0.0410888	GAGAUGA	NM_178645|Blmh|104184|bleomycin hydrolase	AK029274|Blmh|104184|bleomycin hydrolase	AK049461|Blmh|104184|bleomycin hydrolase	AK051441|Blmh|104184|bleomycin hydrolase	AK150438|Blmh|104184|bleomycin hydrolase	BC027403|Blmh|104184|bleomycin hydrolase	AK040799|Blmh|104184|bleomycin hydrolase	BC027362|Blmh|104184|bleomycin hydrolase	BC024090|Blmh|104184|bleomycin hydrolase	AK053872|Blmh|104184|bleomycin hydrolase	AK150896|Blmh|104184|bleomycin hydrolase	AK167325|Blmh|104184|bleomycin hydrolase	AK035228|Blmh|104184|bleomycin hydrolase	BC027037|Blmh|104184|bleomycin hydrolase	AK197894|Blmh|104184|bleomycin hydrolase	AK199579|Blmh|104184|bleomycin hydrolase
mm9_v1_chr4_-_82698070_82698070	0.0408078	GAGAUGA	AB160986|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_001198811|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr16_+_14163356_14163402	0.0404322	GAGAUGA	NM_001114085|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	NM_023317|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK150826|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK166858|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	BC023267|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)
mm9_v1_chr5_+_142877419_142877473	0.0402024	GAGAUGA	NM_199068|Foxk1|17425|forkhead box K1	AK147375|Foxk1|17425|forkhead box K1	L26507|Foxk1|17425|forkhead box K1	U95016|Foxk1|17425|forkhead box K1	BC060238|Foxk1|17425|forkhead box K1
mm9_v1_chr4_-_126645129_126645179	0.0398529	GAGAUGA	AK148366|Zmym4|67785|zinc finger, MYM-type 4	NM_001114399|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr14_-_68551487_68551628	0.0398428	GAGAUGA	AK147975|Dock5|68813|dedicator of cytokinesis 5	BC158046|Dock5|68813|dedicator of cytokinesis 5	BC158135|Dock5|68813|dedicator of cytokinesis 5	BC158138|Dock5|68813|dedicator of cytokinesis 5	AK053909|Dock5|68813|dedicator of cytokinesis 5	NM_177780|Dock5|68813|dedicator of cytokinesis 5
mm9_v1_chr15_-_81560309_81560370	0.0397595	GAGAUGA	AK035571|Rangap1|19387|RAN GTPase activating protein 1	AK042930|Rangap1|19387|RAN GTPase activating protein 1	AK133905|Rangap1|19387|RAN GTPase activating protein 1	AK159525|Rangap1|19387|RAN GTPase activating protein 1	BC066213|Rangap1|19387|RAN GTPase activating protein 1	U08110|Rangap1|19387|RAN GTPase activating protein 1	NM_001146174|Rangap1|19387|RAN GTPase activating protein 1	NM_011241|Rangap1|19387|RAN GTPase activating protein 1
mm9_v1_chr2_+_92024338_92024494	0.0389602	GAGAUGA	NM_138755|Phf21a|192285|PHD finger protein 21A	AB105178|Phf21a|192285|PHD finger protein 21A	AK089411|Phf21a|192285|PHD finger protein 21A	BC019181|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr15_-_83425479_83425610	0.0389373	GAGAUGA	AM690756|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	BC055368|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK084879|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK134345|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK150116|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK143496|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	NM_183017|Ttll12|223723|tubulin tyrosine ligase-like family, member 12
mm9_v1_chr11_+_61890494_61890602	0.0386153	GAGAUGA	AK050982|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1	AK220465|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1	NM_001029936|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1
mm9_v1_chr12_+_82960953_82961016	0.0386137	GAGAUGA	NM_018814|Pcnx|54604|pecanex homolog (Drosophila)
mm9_v1_chr4_+_48137778_48137803	0.0385915	GAGAUGA	AK014718|Stx17|67727|syntaxin 17	AK154503|Stx17|67727|syntaxin 17	NM_026343|Stx17|67727|syntaxin 17	AK011400|Stx17|67727|syntaxin 17	AK135240|Stx17|67727|syntaxin 17	AK018526|Stx17|67727|syntaxin 17	AK034718|Stx17|67727|syntaxin 17	BC028639|Stx17|67727|syntaxin 17
mm9_v1_chr9_-_20781206_20781236	0.0382637	GAGAUGA	AK170436|S1pr2|14739|sphingosine-1-phosphate receptor 2	AK085114|S1pr2|14739|sphingosine-1-phosphate receptor 2	NM_010333|S1pr2|14739|sphingosine-1-phosphate receptor 2
mm9_v1_chr3_-_95021614_95021863	0.0381275	GAGAUGA	BC150160|Gabpb2|213054|GA repeat binding protein, beta 2	BC150482|Gabpb2|213054|GA repeat binding protein, beta 2	AK007509|Gabpb2|213054|GA repeat binding protein, beta 2	AK163939|Gabpb2|213054|GA repeat binding protein, beta 2	AK030849|Gabpb2|213054|GA repeat binding protein, beta 2	AK036692|Gabpb2|213054|GA repeat binding protein, beta 2	AK087979|Gabpb2|213054|GA repeat binding protein, beta 2	AK086817|Gabpb2|213054|GA repeat binding protein, beta 2	AK141382|Gabpb2|213054|GA repeat binding protein, beta 2	NM_029885|Gabpb2|213054|GA repeat binding protein, beta 2	NM_172512|Gabpb2|213054|GA repeat binding protein, beta 2
mm9_v1_chr4_+_45031496_45031534	0.0378115	GAGAUGA	NM_022811|Polr1e|64424|polymerase (RNA) I polypeptide E	AK083948|Polr1e|64424|polymerase (RNA) I polypeptide E	AK132556|Polr1e|64424|polymerase (RNA) I polypeptide E	D14336|Polr1e|64424|polymerase (RNA) I polypeptide E	BC034783|Polr1e|64424|polymerase (RNA) I polypeptide E	AK050780|Polr1e|64424|polymerase (RNA) I polypeptide E
mm9_v1_chr9_+_44412931_44412987	0.0376216	GAGAUGA	NM_001110826|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	NM_007841|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	NM_181324|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	AK148483|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	AK036648|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	AK054144|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr15_-_102076706_102076930	0.0373744	GAGAUGA	M34475|Rarg|19411|retinoic acid receptor, gamma	AK155911|Rarg|19411|retinoic acid receptor, gamma	NM_001042727|Rarg|19411|retinoic acid receptor, gamma	M32069|Rarg|19411|retinoic acid receptor, gamma
mm9_v1_chrX_-_92640149_92640178	0.0372925	GAGAUGA	BC053442|Fam123b|72345|family with sequence similarity 123, member B	AK012651|Fam123b|72345|family with sequence similarity 123, member B	AK049774|Fam123b|72345|family with sequence similarity 123, member B	NM_175179|Fam123b|72345|family with sequence similarity 123, member B
mm9_v1_chr2_-_120229789_120229851	0.037217	GAGAUGA	AK086738|Tmem87a|211499|transmembrane protein 87A	BC004047|Tmem87a|211499|transmembrane protein 87A	AK044591|Tmem87a|211499|transmembrane protein 87A	AK134268|Tmem87a|211499|transmembrane protein 87A	AK137137|Tmem87a|211499|transmembrane protein 87A	BC027354|Tmem87a|211499|transmembrane protein 87A	AK088559|Tmem87a|211499|transmembrane protein 87A	NM_001110496|Tmem87a|211499|transmembrane protein 87A	NM_001110497|Tmem87a|211499|transmembrane protein 87A	NM_173734|Tmem87a|211499|transmembrane protein 87A
mm9_v1_chr15_+_86044834_86044934	0.0371448	GAGAUGA	AK155770|Tbc1d22a|223754|TBC1 domain family, member 22a	AK154602|Tbc1d22a|223754|TBC1 domain family, member 22a	AK154226|Tbc1d22a|223754|TBC1 domain family, member 22a	AK039627|Tbc1d22a|223754|TBC1 domain family, member 22a	AK155459|Tbc1d22a|223754|TBC1 domain family, member 22a	AK146872|Tbc1d22a|223754|TBC1 domain family, member 22a	BC066009|Tbc1d22a|223754|TBC1 domain family, member 22a	NM_145476|Tbc1d22a|223754|TBC1 domain family, member 22a
mm9_v1_chr3_+_58380577_58380636	0.0368588	GAGAUGA	NM_001040396|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK017528|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK032838|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK047958|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC132453|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC138424|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK013022|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC019970|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK146778|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene
mm9_v1_chr17_+_36974084_36974137	0.036539	GAGAUGA	AK171019|Trim26|22670|tripartite motif-containing 26	NM_001025599|Trim26|22670|tripartite motif-containing 26	AK042252|Trim26|22670|tripartite motif-containing 26	BC037110|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr11_+_80114320_80114577	0.0363465	GAGAUGA	AJ313479|Rhbdl3|246104|rhomboid, veinlet-like 3 (Drosophila)	NM_139228|Rhbdl3|246104|rhomboid, veinlet-like 3 (Drosophila)	BC054784|Rhbdl3|246104|rhomboid, veinlet-like 3 (Drosophila)	BC056969|Rhbdl3|246104|rhomboid, veinlet-like 3 (Drosophila)
mm9_v1_chr2_-_163245205_163245247	0.0361691	GAGAUGA	BC005579|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	NM_025699|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK009708|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK014323|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK088622|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK153499|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK006969|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene
mm9_v1_chr7_+_30644997_30645134	0.0357606	GAGAUGA	NM_172740|Zfp420|233058|zinc finger protein 420	AK029387|Zfp420|233058|zinc finger protein 420	AK045435|Zfp420|233058|zinc finger protein 420	BC050249|Zfp420|233058|zinc finger protein 420	BC055817|Zfp420|233058|zinc finger protein 420	AK045821|Zfp420|233058|zinc finger protein 420
mm9_v1_chr12_-_70994089_70994191	0.0352953	GAGAUGA	BC048173|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK045031|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK053775|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	NM_201519|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr2_-_73730605_73730700	0.0344279	GAGAUGA	AK139844|Atf2|11909|activating transcription factor 2	AK146839|Atf2|11909|activating transcription factor 2	AK139515|Atf2|11909|activating transcription factor 2	BC079883|Atf2|11909|activating transcription factor 2	BC085137|Atf2|11909|activating transcription factor 2	BC082596|Atf2|11909|activating transcription factor 2	AK035438|Atf2|11909|activating transcription factor 2	AK140855|Atf2|11909|activating transcription factor 2	AK144977|Atf2|11909|activating transcription factor 2	AK051591|Atf2|11909|activating transcription factor 2	AK087424|Atf2|11909|activating transcription factor 2	NM_001025093|Atf2|11909|activating transcription factor 2	NM_009715|Atf2|11909|activating transcription factor 2	AK145887|Atf2|11909|activating transcription factor 2
mm9_v1_chr11_-_60034046_60034130	0.034427	GAGAUGA	AK154424|Srebf1|20787|sterol regulatory element binding transcription factor 1	BC056922|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK150052|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK052628|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK169607|Srebf1|20787|sterol regulatory element binding transcription factor 1	NM_011480|Srebf1|20787|sterol regulatory element binding transcription factor 1
mm9_v1_chr10_+_61143056_61143106	0.0339278	GAGAUGA	AK157843|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	AK168175|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	AK159239|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	NM_009120|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	BC005549|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	L20294|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr17_-_35975148_35975258	0.0339091	GAGAUGA	BC003825|Tubb5|22154|tubulin, beta 5	AK076196|Tubb5|22154|tubulin, beta 5	AK148978|Tubb5|22154|tubulin, beta 5	AK167808|Tubb5|22154|tubulin, beta 5	AK168271|Tubb5|22154|tubulin, beta 5	AK169123|Tubb5|22154|tubulin, beta 5	AK011263|Tubb5|22154|tubulin, beta 5	AK165249|Tubb5|22154|tubulin, beta 5	AK169210|Tubb5|22154|tubulin, beta 5	AK010960|Tubb5|22154|tubulin, beta 5	AK011765|Tubb5|22154|tubulin, beta 5	AK012350|Tubb5|22154|tubulin, beta 5	AK017806|Tubb5|22154|tubulin, beta 5	AK051164|Tubb5|22154|tubulin, beta 5	AK051393|Tubb5|22154|tubulin, beta 5	AK083327|Tubb5|22154|tubulin, beta 5	AK146567|Tubb5|22154|tubulin, beta 5	AK151215|Tubb5|22154|tubulin, beta 5	AK151670|Tubb5|22154|tubulin, beta 5	AK160225|Tubb5|22154|tubulin, beta 5	AK161575|Tubb5|22154|tubulin, beta 5	AK167691|Tubb5|22154|tubulin, beta 5	AK167779|Tubb5|22154|tubulin, beta 5	AK167926|Tubb5|22154|tubulin, beta 5	AK169295|Tubb5|22154|tubulin, beta 5	AK169606|Tubb5|22154|tubulin, beta 5	NM_011655|Tubb5|22154|tubulin, beta 5
mm9_v1_chr5_+_138526303_138526341	0.0330415	GAGAUGA	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr7_-_120512849_120512864	0.032629	GAGAUGA	BC050781|Btbd10|68815|BTB (POZ) domain containing 10	NM_133700|Btbd10|68815|BTB (POZ) domain containing 10
mm9_v1_chr9_-_119932620_119932715	0.0325758	GAGAUGA	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr7_-_109713935_109713982	0.0322408	GAGAUGA	BC010580|Trim21|20821|tripartite motif-containing 21	L27990|Trim21|20821|tripartite motif-containing 21	AK150484|Trim21|20821|tripartite motif-containing 21	AK171489|Trim21|20821|tripartite motif-containing 21	AK152619|Trim21|20821|tripartite motif-containing 21	AK141294|Trim21|20821|tripartite motif-containing 21	NM_001082552|Trim21|20821|tripartite motif-containing 21	NM_009277|Trim21|20821|tripartite motif-containing 21
mm9_v1_chr1_+_95240200_95240244	0.0319634	GAGAUGA	AK129024|Ppp1r7|66385|protein phosphatase 1, regulatory (inhibitor) subunit 7	AK009342|Ppp1r7|66385|protein phosphatase 1, regulatory (inhibitor) subunit 7	AK162517|Ppp1r7|66385|protein phosphatase 1, regulatory (inhibitor) subunit 7	AK145136|Ppp1r7|66385|protein phosphatase 1, regulatory (inhibitor) subunit 7	BC013524|Ppp1r7|66385|protein phosphatase 1, regulatory (inhibitor) subunit 7	AF222867|Ppp1r7|66385|protein phosphatase 1, regulatory (inhibitor) subunit 7	NM_023200|Ppp1r7|66385|protein phosphatase 1, regulatory (inhibitor) subunit 7	AK009870|Ppp1r7|66385|protein phosphatase 1, regulatory (inhibitor) subunit 7
mm9_v1_chr4_-_126106749_126106807	0.0319319	GAGAUGA	AK035042|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK083652|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK171118|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK154436|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	NM_153402|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3
mm9_v1_chr1_-_108610861_108610866	0.031926	GAGAUGA	AK049473|Bcl2|12043|B-cell leukemia/lymphoma 2	NM_009741|Bcl2|12043|B-cell leukemia/lymphoma 2	NM_177410|Bcl2|12043|B-cell leukemia/lymphoma 2
mm9_v1_chr18_-_61336629_61336741	0.031475	GAGAUGA	BC079580|Hmgxb3|106894|HMG box domain containing 3	AK088852|Hmgxb3|106894|HMG box domain containing 3	AK034086|Hmgxb3|106894|HMG box domain containing 3	AK041866|Hmgxb3|106894|HMG box domain containing 3	AK144993|Hmgxb3|106894|HMG box domain containing 3	NM_178277|Hmgxb3|106894|HMG box domain containing 3	AB045322|Hmgxb3|106894|HMG box domain containing 3	NM_134134|Hmgxb3|106894|HMG box domain containing 3
mm9_v1_chr10_+_79451332_79451366	0.031469	GAGAUGA	AK051845|Cnn2|12798|calponin 2	NM_007725|Cnn2|12798|calponin 2
mm9_v1_chr7_+_59134514_59134648	0.0313947	GAGAUGA	NM_008087|Gas2|14453|growth arrest specific 2	M21828|Gas2|14453|growth arrest specific 2
mm9_v1_chr19_-_7416286_7416363	0.0308516	GAGAUGA	BC058556|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	AK172444|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_001080388|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_001080389|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_007928|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr18_+_36838868_36838897	0.0306619	GAGAUGA	NM_001083317|Slc35a4|67843|solute carrier family 35, member A4	NM_026404|Slc35a4|67843|solute carrier family 35, member A4
mm9_v1_chr11_+_62462155_62462185	0.0302393	GAGAUGA	NM_175002|Mmgt2|216829|membrane magnesium transporter 2	BC096583|Mmgt2|216829|membrane magnesium transporter 2
mm9_v1_chr7_+_132851389_132851439	0.0299856	GAGAUGA	NM_001081022|D430042O09Rik|233865|RIKEN cDNA D430042O09 gene	BC157963|D430042O09Rik|233865|RIKEN cDNA D430042O09 gene	BC158019|D430042O09Rik|233865|RIKEN cDNA D430042O09 gene
mm9_v1_chr11_-_102417457_102417523	0.0299264	GAGAUGA	AK135410|Gpatch8|237943|G patch domain containing 8	NM_001159492|Gpatch8|237943|G patch domain containing 8
mm9_v1_chr12_+_113917038_113917088	0.0297312	GAGAUGA	BC046387|Zbtb42|382639|zinc finger and BTB domain containing 42	NM_001100460|Zbtb42|382639|zinc finger and BTB domain containing 42
mm9_v1_chr5_+_136108487_136108731	0.0295941	GAGAUGA	AK140006|Rhbdd2|215160|rhomboid domain containing 2	AK141182|Rhbdd2|215160|rhomboid domain containing 2	NM_146002|Rhbdd2|215160|rhomboid domain containing 2	AK165926|Rhbdd2|215160|rhomboid domain containing 2	AK041845|Rhbdd2|215160|rhomboid domain containing 2	AK030434|Rhbdd2|215160|rhomboid domain containing 2	AK043674|Rhbdd2|215160|rhomboid domain containing 2	BC018360|Rhbdd2|215160|rhomboid domain containing 2	BC028957|Rhbdd2|215160|rhomboid domain containing 2	AK189822|Rhbdd2|215160|rhomboid domain containing 2	AK212798|Rhbdd2|215160|rhomboid domain containing 2
mm9_v1_chr3_+_94641479_94641499	0.0291428	GAGAUGA	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr7_+_104728398_104728430	0.0288898	GAGAUGA	AK134242|Rsf1|233532|remodeling and spacing factor 1	NM_001081267|Rsf1|233532|remodeling and spacing factor 1	AK138087|Rsf1|233532|remodeling and spacing factor 1	AK146675|Rsf1|233532|remodeling and spacing factor 1	BC085127|Rsf1|233532|remodeling and spacing factor 1	AK146154|Rsf1|233532|remodeling and spacing factor 1	AK032853|Rsf1|233532|remodeling and spacing factor 1
mm9_v1_chr3_+_122432075_122432112	0.0287194	GAGAUGA	AF541937|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	NM_153422|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC119137|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC120486|Pde5a|242202|phosphodiesterase 5A, cGMP-specific
mm9_v1_chr8_-_127473082_127473245	0.0281699	GAGAUGA	NM_053207|Egln1|112405|EGL nine homolog 1 (C. elegans)
mm9_v1_chr7_+_98239230_98239295	0.0278066	GAGAUGA	NM_011807|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr15_-_76352331_76352558	0.027573	GAGAUGA	BC057562|Scrt1|170729|scratch homolog 1, zinc finger protein (Drosophila)	BC089316|Scrt1|170729|scratch homolog 1, zinc finger protein (Drosophila)	NM_130893|Scrt1|170729|scratch homolog 1, zinc finger protein (Drosophila)
mm9_v1_chr14_+_52604434_52604640	0.0272431	GAGAUGA	AK163945|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	NM_001145921|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	NM_001145922|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	NM_198249|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK134295|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK143527|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK131136|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK147761|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK053592|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	BC059018|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK202688|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40	AK155659|Arhgef40|268739|Rho guanine nucleotide exchange factor (GEF) 40
mm9_v1_chr14_+_84843366_84843370	0.0271979	GAGAUGA	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr5_-_144493077_144493148	0.0267757	GAGAUGA	NM_029749|Usp42|76800|ubiquitin specific peptidase 42
mm9_v1_chr6_+_53523365_53523387	0.0266468	GAGAUGA	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr19_+_31943250_31943302	0.0262396	GAGAUGA	NM_001081074|A1cf|69865|APOBEC1 complementation factor	AY566862|A1cf|69865|APOBEC1 complementation factor	AY566863|A1cf|69865|APOBEC1 complementation factor	AY566864|A1cf|69865|APOBEC1 complementation factor	AK007970|A1cf|69865|APOBEC1 complementation factor	BC089622|A1cf|69865|APOBEC1 complementation factor
mm9_v1_chr4_+_116549978_116550006	0.0258629	GAGAUGA	AK016928|Zswim5|74464|zinc finger, SWIM domain containing 5	AK122519|Zswim5|74464|zinc finger, SWIM domain containing 5	NM_001029912|Zswim5|74464|zinc finger, SWIM domain containing 5
mm9_v1_chr19_+_53217238_53217304	0.0256171	GAGAUGA	NM_001164100|Add3|27360|adducin 3 (gamma)	AK144174|Add3|27360|adducin 3 (gamma)
mm9_v1_chr14_-_73725576_73725603	0.0253771	GAGAUGA	AK011246|Rb1|19645|retinoblastoma 1	BC096525|Rb1|19645|retinoblastoma 1	NM_009029|Rb1|19645|retinoblastoma 1
mm9_v1_chr2_+_110561733_110561771	0.0250982	GAGAUGA	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr9_+_75862772_75862821	0.0249978	GAGAUGA	BC037381|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	NM_173731|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK141622|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK164164|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm9_v1_chr16_-_65105465_65105679	0.0248367	GAGAUGA	BC120507|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	BC137604|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	NM_008310|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	Z14224|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	AK045364|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F
mm9_v1_chr5_-_89105135_89105221	0.0246525	GAGAUGA	AK045986|Grsf1|231413|G-rich RNA sequence binding factor 1	AK044889|Grsf1|231413|G-rich RNA sequence binding factor 1	AK077782|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_178700|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr3_+_82161952_82161996	0.0245781	GAGAUGA	AK138540|Mtap9|213582|microtubule-associated protein 9	AK038737|Mtap9|213582|microtubule-associated protein 9	NM_001081230|Mtap9|213582|microtubule-associated protein 9
mm9_v1_chr8_-_46467524_46467644	0.0243779	GAGAUGA	BC035537|Fam149a|212326|family with sequence similarity 149, member A	AK141607|Fam149a|212326|family with sequence similarity 149, member A	AK140440|Fam149a|212326|family with sequence similarity 149, member A	NM_153535|Fam149a|212326|family with sequence similarity 149, member A
mm9_v1_chr2_+_22477837_22477846	0.0241473	GAGAUGA	D42051|Gad2|14417|glutamic acid decarboxylase 2	NM_008078|Gad2|14417|glutamic acid decarboxylase 2
mm9_v1_chr9_+_53345151_53345154	0.0240924	GAGAUGA	AK080294|Npat|244879|nuclear protein in the AT region	NM_001081152|Npat|244879|nuclear protein in the AT region
mm9_v1_chr3_-_115710131_115710328	0.0238808	GAGAUGA	AF529196|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AF233322|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC050193|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC017136|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK075802|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK010008|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	NM_023214|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7
mm9_v1_chr5_-_66543123_66543228	0.023567	GAGAUGA	AK170082|Rbm47|245945|RNA binding motif protein 47	NM_001127382|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr8_+_12757011_12757296	0.0232828	GAGAUGA	AK147497|Atp11a|50770|ATPase, class VI, type 11A	NM_015804|Atp11a|50770|ATPase, class VI, type 11A	AF156551|Atp11a|50770|ATPase, class VI, type 11A	BC145399|Atp11a|50770|ATPase, class VI, type 11A	BC145400|Atp11a|50770|ATPase, class VI, type 11A	BC138715|Atp11a|50770|ATPase, class VI, type 11A
mm9_v1_chr19_-_53465036_53465068	0.0232527	GAGAUGA	AK168575|Smndc1|76479|survival motor neuron domain containing 1	BC058779|Smndc1|76479|survival motor neuron domain containing 1	AK010395|Smndc1|76479|survival motor neuron domain containing 1	AK078834|Smndc1|76479|survival motor neuron domain containing 1	AK090047|Smndc1|76479|survival motor neuron domain containing 1	NM_172429|Smndc1|76479|survival motor neuron domain containing 1
mm9_v1_chr10_+_101621712_101621712	0.0230951	GAGAUGA	AK032009|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_001162369|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm9_v1_chr9_-_107192203_107192207	0.0227872	GAGAUGA	AK170456|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	BC031467|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	NM_178907|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3
mm9_v1_chr2_+_112106470_112106612	0.0222754	GAGAUGA	BC062099|Slc12a6|107723|solute carrier family 12, member 6	NM_133649|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr15_-_99650502_99650572	0.0221224	GAGAUGA	AF307844|Lima1|65970|LIM domain and actin binding 1	AK028186|Lima1|65970|LIM domain and actin binding 1	AK031698|Lima1|65970|LIM domain and actin binding 1	AK132314|Lima1|65970|LIM domain and actin binding 1	AK085065|Lima1|65970|LIM domain and actin binding 1	NM_023063|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr9_+_121669121_121669172	0.0214801	GAGAUGA	NM_001166644|Zfp651|270210|zinc finger protein 651
mm9_v1_chr2_+_153117135_153117203	0.0214231	GAGAUGA	NM_008444|Kif3b|16569|kinesin family member 3B	AK147467|Kif3b|16569|kinesin family member 3B	AK083700|Kif3b|16569|kinesin family member 3B	AK148200|Kif3b|16569|kinesin family member 3B	BC065132|Kif3b|16569|kinesin family member 3B	AK122258|Kif3b|16569|kinesin family member 3B	AK081541|Kif3b|16569|kinesin family member 3B
mm9_v1_chr14_+_119337150_119337225	0.021378	GAGAUGA	NM_008929|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	AK146097|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	AK148270|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	BC013766|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	U28423|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3
mm9_v1_chr5_-_131783352_131783418	0.0208963	GAGAUGA	BC069177|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)	NM_145218|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)	BC158110|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)
mm9_v1_chr3_+_68495345_68495448	0.0206946	GAGAUGA	M86672|Il12a|16159|interleukin 12a	NM_008351|Il12a|16159|interleukin 12a	BC116851|Il12a|16159|interleukin 12a	BC116855|Il12a|16159|interleukin 12a	AF128210|Il12a|16159|interleukin 12a	AF128211|Il12a|16159|interleukin 12a	AF128212|Il12a|16159|interleukin 12a	AF128213|Il12a|16159|interleukin 12a
mm9_v1_chr19_-_36131650_36131849	0.020573	GAGAUGA	AK138150|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	FM178515|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	FM178516|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	BC116986|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	Z23107|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	AK139197|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	NM_008315|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7
mm9_v1_chr4_+_101927346_101927346	0.0202622	GAGAUGA	BC049864|Pde4b|18578|phosphodiesterase 4B, cAMP specific	NM_001177983|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr4_+_45354940_45354977	0.020207	GAGAUGA	AK170534|Dcaf10|242418|DDB1 and CUL4 associated factor 10	AK165246|Dcaf10|242418|DDB1 and CUL4 associated factor 10	NM_153167|Dcaf10|242418|DDB1 and CUL4 associated factor 10
mm9_v1_chr6_-_83391623_83391671	0.0197715	GAGAUGA	AK044758|Tet3|194388|tet oncogene family member 3	AK046543|Tet3|194388|tet oncogene family member 3	AK046552|Tet3|194388|tet oncogene family member 3	AK046553|Tet3|194388|tet oncogene family member 3	NM_183138|Tet3|194388|tet oncogene family member 3
mm9_v1_chr16_+_35983402_35983472	0.0196893	GAGAUGA	AK169464|Kpna1|16646|karyopherin (importin) alpha 1	AK169311|Kpna1|16646|karyopherin (importin) alpha 1	AK169348|Kpna1|16646|karyopherin (importin) alpha 1	AK028307|Kpna1|16646|karyopherin (importin) alpha 1	AK154800|Kpna1|16646|karyopherin (importin) alpha 1	AK028259|Kpna1|16646|karyopherin (importin) alpha 1	NM_008465|Kpna1|16646|karyopherin (importin) alpha 1	U20619|Kpna1|16646|karyopherin (importin) alpha 1	BC006771|Kpna1|16646|karyopherin (importin) alpha 1
mm9_v1_chr19_-_17431079_17431156	0.0192685	GAGAUGA	BC039126|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK199888|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK045216|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK167048|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	D87333|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	NM_173442|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2
mm9_v1_chr1_+_194014677_194014800	0.018584	GAGAUGA	AK140193|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_001038607|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_010600|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	U04294|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC109012|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC109013|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1
mm9_v1_chr17_+_3114963_3115105	0.0183297	GAGAUGA	AK157957|Scaf8|106583|SR-related CTD-associated factor 8	AK042381|Scaf8|106583|SR-related CTD-associated factor 8	NM_134123|Scaf8|106583|SR-related CTD-associated factor 8	BC075621|Scaf8|106583|SR-related CTD-associated factor 8	AK122451|Scaf8|106583|SR-related CTD-associated factor 8
mm9_v1_chr2_-_5635547_5635807	0.0182705	GAGAUGA	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr19_-_38199737_38199810	0.0182521	GAGAUGA	BC093529|Rbp4|19662|retinol binding protein 4, plasma	NM_001159487|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr14_-_99445271_99445388	0.0182051	GAGAUGA	AK168114|Mzt1|76789|mitotic spindle organizing protein 1	AK047481|Mzt1|76789|mitotic spindle organizing protein 1	AK082817|Mzt1|76789|mitotic spindle organizing protein 1	AK087564|Mzt1|76789|mitotic spindle organizing protein 1	AK169036|Mzt1|76789|mitotic spindle organizing protein 1	AK170746|Mzt1|76789|mitotic spindle organizing protein 1	BC038168|Mzt1|76789|mitotic spindle organizing protein 1	AK165605|Mzt1|76789|mitotic spindle organizing protein 1	BC098481|Mzt1|76789|mitotic spindle organizing protein 1	AK150268|Mzt1|76789|mitotic spindle organizing protein 1	AK151232|Mzt1|76789|mitotic spindle organizing protein 1	AK151358|Mzt1|76789|mitotic spindle organizing protein 1	AK151819|Mzt1|76789|mitotic spindle organizing protein 1	AK010788|Mzt1|76789|mitotic spindle organizing protein 1	BC117005|Mzt1|76789|mitotic spindle organizing protein 1	BC117007|Mzt1|76789|mitotic spindle organizing protein 1	AK160911|Mzt1|76789|mitotic spindle organizing protein 1	NM_175245|Mzt1|76789|mitotic spindle organizing protein 1
mm9_v1_chr6_-_52141697_52141712	0.0178339	GAGAUGA	AK076098|Hoxa4|15401|homeobox A4	BC107172|Hoxa4|15401|homeobox A4	NM_008265|Hoxa4|15401|homeobox A4
mm9_v1_chr12_+_106923552_106923650	0.0172836	GAGAUGA	NM_178613|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK171097|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	BC031494|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK168962|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK042664|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK079775|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK020785|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK029484|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene
mm9_v1_chr2_-_30270970_30271290	0.0171215	GAGAUGA	X85983|Crat|12908|carnitine acetyltransferase	BC006668|Crat|12908|carnitine acetyltransferase	AK041431|Crat|12908|carnitine acetyltransferase	AK170740|Crat|12908|carnitine acetyltransferase	NM_007760|Crat|12908|carnitine acetyltransferase	AK132179|Crat|12908|carnitine acetyltransferase
mm9_v1_chr16_+_13358513_13358556	0.0171015	GAGAUGA	NM_153588|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr19_+_8738494_8738608	0.0166442	GAGAUGA	AK138282|Chrm1|12669|cholinergic receptor, muscarinic 1, CNS	NM_001112697|Chrm1|12669|cholinergic receptor, muscarinic 1, CNS	NM_007698|Chrm1|12669|cholinergic receptor, muscarinic 1, CNS	BC094242|Chrm1|12669|cholinergic receptor, muscarinic 1, CNS	AJ006521|Chrm1|12669|cholinergic receptor, muscarinic 1, CNS
mm9_v1_chr11_-_34597324_34597373	0.0158502	GAGAUGA	AY027438|Dock2|94176|dedicator of cyto-kinesis 2	NM_033374|Dock2|94176|dedicator of cyto-kinesis 2
mm9_v1_chr14_+_49791899_49792002	0.0156567	GAGAUGA	NM_001081430|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK015640|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC157931|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC158065|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC172029|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit
mm9_v1_chr8_-_108375786_108375962	0.0155131	GAGAUGA	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr4_+_138936531_138936597	0.0153899	GAGAUGA	NM_001160319|Ubr4|69116|ubiquitin protein ligase E3 component n-recognin 4	AK086097|Ubr4|69116|ubiquitin protein ligase E3 component n-recognin 4
mm9_v1_chr5_-_31210160_31210170	0.0151283	GAGAUGA	NM_024460|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chr12_+_3572838_3573040	0.0150524	GAGAUGA	AJ010223|Dtnb|13528|dystrobrevin, beta	BC030924|Dtnb|13528|dystrobrevin, beta	NM_007886|Dtnb|13528|dystrobrevin, beta
mm9_v1_chr8_-_108351060_108351249	0.0149639	GAGAUGA	AK173177|Ranbp10|74334|RAN binding protein 10	BC024698|Ranbp10|74334|RAN binding protein 10	AK048772|Ranbp10|74334|RAN binding protein 10	EU281316|Ranbp10|74334|RAN binding protein 10	AY337314|Ranbp10|74334|RAN binding protein 10	NM_145824|Ranbp10|74334|RAN binding protein 10
mm9_v1_chr3_-_58496285_58496330	0.014444	GAGAUGA	AK139626|Siah2|20439|seven in absentia 2	BC058400|Siah2|20439|seven in absentia 2	NM_009174|Siah2|20439|seven in absentia 2	AK149316|Siah2|20439|seven in absentia 2
mm9_v1_chr18_+_54021746_54021814	0.0142097	GAGAUGA	AK049379|Csnk1g3|70425|casein kinase 1, gamma 3	NM_152809|Csnk1g3|70425|casein kinase 1, gamma 3	AK080491|Csnk1g3|70425|casein kinase 1, gamma 3
mm9_v1_chr1_-_45560001_45560126	0.01406	GAGAUGA	AK147328|Col5a2|12832|collagen, type V, alpha 2	NM_007737|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr9_+_62525612_62525700	0.0131303	GAGAUGA	NM_176922|Itga11|319480|integrin alpha 11	AK054303|Itga11|319480|integrin alpha 11	AY124460|Itga11|319480|integrin alpha 11	BC058716|Itga11|319480|integrin alpha 11
mm9_v1_chr7_+_28390872_28390878	0.0127836	GAGAUGA	BC026151|Akt2|11652|thymoma viral proto-oncogene 2	NM_007434|Akt2|11652|thymoma viral proto-oncogene 2
mm9_v1_chr16_+_3847222_3847312	0.0126532	GAGAUGA	NM_001081217|Zfp174|385674|zinc finger protein 174	BC147582|Zfp174|385674|zinc finger protein 174	BC151072|Zfp174|385674|zinc finger protein 174	BC151078|Zfp174|385674|zinc finger protein 174	AK141897|Zfp174|385674|zinc finger protein 174	BC079601|Zfp174|385674|zinc finger protein 174
mm9_v1_chrX_+_78315963_78315999	0.0124961	GAGAUGA	NM_138751|Tmem47|192216|transmembrane protein 47
mm9_v1_chr7_-_4796261_4796301	0.0124793	GAGAUGA	NM_172737|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr1_-_162281701_162281701	0.0123992	GAGAUGA	AK147634|Rabgap1l|29809|RAB GTPase activating protein 1-like	NM_001038621|Rabgap1l|29809|RAB GTPase activating protein 1-like
mm9_v1_chr3_-_107499460_107499466	0.0122139	GAGAUGA	NM_145542|Ahcyl1|229709|S-adenosylhomocysteine hydrolase-like 1
mm9_v1_chr3_+_89518943_89518994	0.0119753	GAGAUGA	NM_001038587|Adar|56417|adenosine deaminase, RNA-specific	AK147614|Adar|56417|adenosine deaminase, RNA-specific	AK076413|Adar|56417|adenosine deaminase, RNA-specific
mm9_v1_chr3_+_30691760_30691806	0.0119561	GAGAUGA	BC017162|Sec62|69276|SEC62 homolog (S. cerevisiae)	NM_027016|Sec62|69276|SEC62 homolog (S. cerevisiae)
mm9_v1_chr7_-_142129892_142130112	0.0118855	GAGAUGA	BC158077|Fam196a|627214|family with sequence similarity 196, member A	BC158080|Fam196a|627214|family with sequence similarity 196, member A	AK046823|Fam196a|627214|family with sequence similarity 196, member A	AK046846|Fam196a|627214|family with sequence similarity 196, member A	AK140373|Fam196a|627214|family with sequence similarity 196, member A	NM_001143802|Fam196a|627214|family with sequence similarity 196, member A
mm9_v1_chr3_-_107434441_107434654	0.0118496	GAGAUGA	AK194900|Fam40a|229707|family with sequence similarity 40, member A	BC023952|Fam40a|229707|family with sequence similarity 40, member A	AK032065|Fam40a|229707|family with sequence similarity 40, member A	AK032642|Fam40a|229707|family with sequence similarity 40, member A	AK035833|Fam40a|229707|family with sequence similarity 40, member A	AK148011|Fam40a|229707|family with sequence similarity 40, member A	AK169644|Fam40a|229707|family with sequence similarity 40, member A	NM_153563|Fam40a|229707|family with sequence similarity 40, member A
mm9_v1_chr5_+_75548309_75548318	0.0117627	GAGAUGA	NM_011058|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	AK081664|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide
mm9_v1_chr2_+_121121189_121121220	0.0113441	GAGAUGA	NM_001173506|Mtap1a|17754|microtubule-associated protein 1 A	AF182212|Mtap1a|17754|microtubule-associated protein 1 A	BC028853|Mtap1a|17754|microtubule-associated protein 1 A	AK160546|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr17_-_29374656_29374735	0.0113307	GAGAUGA	AK147529|Cpne5|240058|copine V	AK044042|Cpne5|240058|copine V	NM_153166|Cpne5|240058|copine V	BC036971|Cpne5|240058|copine V
mm9_v1_chr19_+_4594318_4594387	0.0109976	GAGAUGA	NM_008797|Pcx|18563|pyruvate carboxylase	L09192|Pcx|18563|pyruvate carboxylase
mm9_v1_chrX_-_12339096_12339247	0.0109406	GAGAUGA	AB019028|Med14|26896|mediator complex subunit 14	NM_001048208|Med14|26896|mediator complex subunit 14	NM_012005|Med14|26896|mediator complex subunit 14	BC065072|Med14|26896|mediator complex subunit 14
mm9_v1_chr14_+_66285235_66285241	0.0108162	GAGAUGA	AK133176|Scara5|71145|scavenger receptor class A, member 5 (putative)	NM_001168318|Scara5|71145|scavenger receptor class A, member 5 (putative)	NM_028903|Scara5|71145|scavenger receptor class A, member 5 (putative)
mm9_v1_chr6_+_29644178_29644255	0.01074	GAGAUGA	AF276890|Tspan33|232670|tetraspanin 33	AK172176|Tspan33|232670|tetraspanin 33	AK004954|Tspan33|232670|tetraspanin 33	BC024685|Tspan33|232670|tetraspanin 33	NM_146173|Tspan33|232670|tetraspanin 33
mm9_v1_chr4_-_41516463_41516600	0.010628	GAGAUGA	BC147810|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC147808|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC147834|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC147836|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC172167|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	BC172173|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	AK009522|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	AK134737|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	NM_001159583|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene	NM_027993|2310028H24Rik|71901|RIKEN cDNA 2310028H24 gene
mm9_v1_chr9_+_21760196_21760229	0.0105724	GAGAUGA	NM_025870|2310047B19Rik|66962|RIKEN cDNA 2310047B19 gene	BC150493|2310047B19Rik|66962|RIKEN cDNA 2310047B19 gene	AK009864|2310047B19Rik|66962|RIKEN cDNA 2310047B19 gene	BC019749|2310047B19Rik|66962|RIKEN cDNA 2310047B19 gene	AK043948|2310047B19Rik|66962|RIKEN cDNA 2310047B19 gene
mm9_v1_chr11_-_97436439_97436456	0.0104838	GAGAUGA	AF040944|Srcin1|56013|SRC kinase signaling inhibitor 1	NM_018873|Srcin1|56013|SRC kinase signaling inhibitor 1	U59873|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr7_+_19511230_19511244	0.0104618	GAGAUGA	NM_001029877|Nova2|384569|neuro-oncological ventral antigen 2
mm9_v1_chr18_-_36829750_36829972	0.0103483	GAGAUGA	AF092039|Sra1|24068|steroid receptor RNA activator 1	AK136702|Sra1|24068|steroid receptor RNA activator 1	AK154232|Sra1|24068|steroid receptor RNA activator 1	BC048362|Sra1|24068|steroid receptor RNA activator 1	AK007302|Sra1|24068|steroid receptor RNA activator 1	AK010375|Sra1|24068|steroid receptor RNA activator 1	NM_001164406|Sra1|24068|steroid receptor RNA activator 1	NM_025291|Sra1|24068|steroid receptor RNA activator 1
mm9_v1_chr14_-_55545586_55545624	0.0101234	GAGAUGA	NM_010112|Efs|13644|embryonal Fyn-associated substrate
mm9_v1_chr8_-_36558514_36558598	0.00997931	GAGAUGA	AK165026|Eri1|67276|exoribonuclease 1	BC046412|Eri1|67276|exoribonuclease 1	AK172005|Eri1|67276|exoribonuclease 1	AK144223|Eri1|67276|exoribonuclease 1	AK014041|Eri1|67276|exoribonuclease 1	AK014410|Eri1|67276|exoribonuclease 1	NM_026067|Eri1|67276|exoribonuclease 1
mm9_v1_chr11_+_86298106_86298244	0.00939671	GAGAUGA	AK036401|Rnft1|76892|ring finger protein, transmembrane 1	NM_029788|Rnft1|76892|ring finger protein, transmembrane 1	AK171077|Rnft1|76892|ring finger protein, transmembrane 1	AK153293|Rnft1|76892|ring finger protein, transmembrane 1	BC050796|Rnft1|76892|ring finger protein, transmembrane 1	AK002624|Rnft1|76892|ring finger protein, transmembrane 1
mm9_v1_chr4_+_32051053_32051104	0.00918438	GAGAUGA	AK145302|Map3k7|26409|mitogen-activated protein kinase kinase kinase 7	AK137046|Map3k7|26409|mitogen-activated protein kinase kinase kinase 7	NM_009316|Map3k7|26409|mitogen-activated protein kinase kinase kinase 7	NM_172688|Map3k7|26409|mitogen-activated protein kinase kinase kinase 7	BC006665|Map3k7|26409|mitogen-activated protein kinase kinase kinase 7	D76446|Map3k7|26409|mitogen-activated protein kinase kinase kinase 7	AK053911|Map3k7|26409|mitogen-activated protein kinase kinase kinase 7
mm9_v1_chr5_-_67819037_67819037	0.00889566	GAGAUGA	NM_001164806|Bend4|666938|BEN domain containing 4
mm9_v1_chr4_+_154975473_154975535	0.00879484	GAGAUGA	AK080215|Slc35e2|320541|solute carrier family 35, member E2	BC058728|Slc35e2|320541|solute carrier family 35, member E2	NM_177186|Slc35e2|320541|solute carrier family 35, member E2
mm9_v1_chr9_-_101101334_101101402	0.0080873	GAGAUGA	AK169510|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	AK132175|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	NM_172144|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr2_+_180234680_180234753	0.00783597	GAGAUGA	AB017027|Ntsr1|18216|neurotensin receptor 1	NM_018766|Ntsr1|18216|neurotensin receptor 1	BC087730|Ntsr1|18216|neurotensin receptor 1
mm9_v1_chr9_-_22112081_22112120	0.00778968	GAGAUGA	BC005471|Zfp810|235050|zinc finger protein 810	NM_145612|Zfp810|235050|zinc finger protein 810	AK032556|Zfp810|235050|zinc finger protein 810
mm9_v1_chr9_+_106270889_106271052	0.00754825	GAGAUGA	AK140372|Dusp7|235584|dual specificity phosphatase 7	NM_153459|Dusp7|235584|dual specificity phosphatase 7
mm9_v1_chr9_-_39411708_39411856	0.00752259	GAGAUGA	AK049098|AW551984|244810|expressed sequence AW551984	NM_178737|AW551984|244810|expressed sequence AW551984	BC061211|AW551984|244810|expressed sequence AW551984
mm9_v1_chr2_-_132073510_132073523	0.00750115	GAGAUGA	AK017729|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene	NM_001141971|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene	NM_027478|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene
mm9_v1_chr17_+_35978442_35978442	0.00725358	GAGAUGA	NM_001010833|Mdc1|240087|mediator of DNA damage checkpoint 1
mm9_v1_chr6_+_113342490_113342490	0.00710095	GAGAUGA	AM690746|Ttll3|101100|tubulin tyrosine ligase-like family, member 3	NM_133923|Ttll3|101100|tubulin tyrosine ligase-like family, member 3
mm9_v1_chr6_-_72908741_72908741	0.00690592	GAGAUGA	NM_001190327|Tmsb10|19240|thymosin, beta 10
mm9_v1_chr12_+_25516433_25516564	0.00684818	GAGAUGA	NM_001083341|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	NM_026037|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK076045|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK012931|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK031682|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK031824|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK033106|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK034873|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	BC025020|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK215458|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AB297383|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AB305046|Mboat2|67216|membrane bound O-acyltransferase domain containing 2
mm9_v1_chr9_-_44152242_44152310	0.00660674	GAGAUGA	AK153884|Hmbs|15288|hydroxymethylbilane synthase	BC003861|Hmbs|15288|hydroxymethylbilane synthase	AK167702|Hmbs|15288|hydroxymethylbilane synthase	AK151020|Hmbs|15288|hydroxymethylbilane synthase	NM_013551|Hmbs|15288|hydroxymethylbilane synthase
mm9_v1_chr2_+_76244578_76244594	0.0064879	GAGAUGA	AK044411|Osbpl6|99031|oxysterol binding protein-like 6	NM_145525|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr9_-_20619426_20619525	0.00643016	GAGAUGA	BC024367|Col5a3|53867|collagen, type V, alpha 3	BC138417|Col5a3|53867|collagen, type V, alpha 3	BC138419|Col5a3|53867|collagen, type V, alpha 3	BC145269|Col5a3|53867|collagen, type V, alpha 3	AF176645|Col5a3|53867|collagen, type V, alpha 3	NM_016919|Col5a3|53867|collagen, type V, alpha 3	AB040491|Col5a3|53867|collagen, type V, alpha 3
mm9_v1_chr19_+_21727795_21727859	0.00640287	GAGAUGA	NM_146096|Fam108b|226016|family with sequence similarity 108, member B	AK017641|Fam108b|226016|family with sequence similarity 108, member B
mm9_v1_chr7_+_119571219_119571592	0.00589269	GAGAUGA	BC059236|Parva|57342|parvin, alpha	NM_020606|Parva|57342|parvin, alpha	AB045321|Parva|57342|parvin, alpha	AF237774|Parva|57342|parvin, alpha	AK162796|Parva|57342|parvin, alpha	AK076473|Parva|57342|parvin, alpha	AF264766|Parva|57342|parvin, alpha	BC039750|Parva|57342|parvin, alpha
mm9_v1_chr7_+_3646102_3646199	0.00574218	GAGAUGA	NM_024168|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK053916|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	BC091756|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK010759|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	BC002205|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK013253|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)
mm9_v1_chr1_-_74170987_74171037	0.00559554	GAGAUGA	NM_027884|Tns1|21961|tensin 1
mm9_v1_chr15_-_79845237_79845237	0.00528344	GAGAUGA	BC053430|Pdgfb|18591|platelet derived growth factor, B polypeptide	NM_011057|Pdgfb|18591|platelet derived growth factor, B polypeptide
mm9_v1_chr18_-_46733959_46734186	0.00524992	GAGAUGA	AK080873|Ticam2|225471|toll-like receptor adaptor molecule 2	AK054192|Ticam2|225471|toll-like receptor adaptor molecule 2	AK151885|Ticam2|225471|toll-like receptor adaptor molecule 2	AY275837|Ticam2|225471|toll-like receptor adaptor molecule 2	BC099933|Ticam2|225471|toll-like receptor adaptor molecule 2	AK134103|Ticam2|225471|toll-like receptor adaptor molecule 2	NM_173394|Ticam2|225471|toll-like receptor adaptor molecule 2
mm9_v1_chr2_-_179711350_179711395	0.00522372	GAGAUGA	NM_001081092|Taf4a|228980|TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr2_+_34287544_34287544	0.00520705	GAGAUGA	BC090644|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	NM_177345|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr2_-_162486882_162486956	0.00505022	GAGAUGA	AF244125|Ptprt|19281|protein tyrosine phosphatase, receptor type, T	NM_021464|Ptprt|19281|protein tyrosine phosphatase, receptor type, T
mm9_v1_chr9_-_108551631_108551731	0.00456704	GAGAUGA	AK165028|Arih2|23807|ariadne homolog 2 (Drosophila)	AK149936|Arih2|23807|ariadne homolog 2 (Drosophila)	BC051998|Arih2|23807|ariadne homolog 2 (Drosophila)	BC052422|Arih2|23807|ariadne homolog 2 (Drosophila)	NM_011790|Arih2|23807|ariadne homolog 2 (Drosophila)	AK011094|Arih2|23807|ariadne homolog 2 (Drosophila)	AK168055|Arih2|23807|ariadne homolog 2 (Drosophila)
mm9_v1_chr12_-_99497498_99497616	0.00431065	GAGAUGA	AK077475|Galc|14420|galactosylceramidase	BC065140|Galc|14420|galactosylceramidase	BC086671|Galc|14420|galactosylceramidase	NM_008079|Galc|14420|galactosylceramidase	AK165478|Galc|14420|galactosylceramidase	D38557|Galc|14420|galactosylceramidase
mm9_v1_chr2_-_52532100_52532129	0.00389056	GAGAUGA	AK147338|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_001037099|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chr13_+_113450958_113450993	0.00377927	GAGAUGA	AK020109|Slc38a9|268706|solute carrier family 38, member 9	BC052361|Slc38a9|268706|solute carrier family 38, member 9	NM_178746|Slc38a9|268706|solute carrier family 38, member 9	AK044735|Slc38a9|268706|solute carrier family 38, member 9	AK043402|Slc38a9|268706|solute carrier family 38, member 9	AK034958|Slc38a9|268706|solute carrier family 38, member 9	AK039821|Slc38a9|268706|solute carrier family 38, member 9
mm9_v1_chr4_+_86221552_86221613	0.003716	GAGAUGA	NM_178376|Rraga|68441|Ras-related GTP binding A	BC048245|Rraga|68441|Ras-related GTP binding A	AK004955|Rraga|68441|Ras-related GTP binding A
mm9_v1_chr5_+_115729684_115729726	0.00350741	GAGAUGA	AK014348|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK045993|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK050334|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	BC052345|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK007496|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	NM_026504|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK009825|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)
mm9_v1_chr8_+_87560809_87560830	0.0032967	GAGAUGA	AK154985|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	AK155760|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	NM_145390|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr15_+_35301285_35301305	0.00328172	GAGAUGA	AK053274|Vps13b|666173|vacuolar protein sorting 13B (yeast)	NM_177151|Vps13b|666173|vacuolar protein sorting 13B (yeast)	AK049111|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr1_+_43155550_43155613	0.00284408	GAGAUGA	BC006931|AI597479|98404|expressed sequence AI597479	NM_133818|AI597479|98404|expressed sequence AI597479	AK081372|AI597479|98404|expressed sequence AI597479
mm9_v1_chr6_-_124915407_124915438	0.00251147	GAGAUGA	NM_012003|Cops7a|26894|COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)
mm9_v1_chr2_+_49474775_49474833	0.00242637	GAGAUGA	BC067051|Kif5c|16574|kinesin family member 5C	NM_008449|Kif5c|16574|kinesin family member 5C
mm9_v1_chr9_-_105297572_105297616	0.00225017	GAGAUGA	AK030042|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11	AK054237|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11	AK030186|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11	NM_172461|Nek11|208583|NIMA (never in mitosis gene a)-related expressed kinase 11
mm9_v1_chr8_+_63111621_63111675	0.00223442	GAGAUGA	AK089654|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_027756|Mfap3l|71306|microfibrillar-associated protein 3-like	BC095950|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr6_+_29298117_29298193	0.00200848	GAGAUGA	AK163674|Calu|12321|calumenin	NM_007594|Calu|12321|calumenin	NM_184053|Calu|12321|calumenin	AK035600|Calu|12321|calumenin	BC051423|Calu|12321|calumenin	AK032402|Calu|12321|calumenin	AK147756|Calu|12321|calumenin	AK160795|Calu|12321|calumenin	AK161807|Calu|12321|calumenin	AK166705|Calu|12321|calumenin	AK148178|Calu|12321|calumenin	AY225334|Calu|12321|calumenin	U81829|Calu|12321|calumenin	AK135295|Calu|12321|calumenin
mm9_v1_chr15_-_99705812_99705887	0.00196094	GAGAUGA	BC031490|Lima1|65970|LIM domain and actin binding 1	AK028311|Lima1|65970|LIM domain and actin binding 1	AK049350|Lima1|65970|LIM domain and actin binding 1	AF307845|Lima1|65970|LIM domain and actin binding 1	AK078959|Lima1|65970|LIM domain and actin binding 1	NM_001113545|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr4_+_55362895_55362941	0.000939872	GAGAUGA	NM_009011|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK084917|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK142280|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK150089|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK160880|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK163379|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK167582|Rad23b|19359|RAD23b homolog (S. cerevisiae)	BC027747|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK160890|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK160973|Rad23b|19359|RAD23b homolog (S. cerevisiae)
mm9_v1_chr2_-_52414072_52414117	0.000669962	GAGAUGA	AK043850|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK079616|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK038633|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_146123|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
