mm9_v1_chr12_-_32398730_32398790	0.961802	GUCAGUU	AK140577|Gpr22|73010|G protein-coupled receptor 22	AK034194|Gpr22|73010|G protein-coupled receptor 22	AK013755|Gpr22|73010|G protein-coupled receptor 22	AK048077|Gpr22|73010|G protein-coupled receptor 22	AK141569|Gpr22|73010|G protein-coupled receptor 22	BC089509|Gpr22|73010|G protein-coupled receptor 22	NM_175191|Gpr22|73010|G protein-coupled receptor 22
mm9_v1_chr2_-_65405546_65405588	0.874656	GUCAGUU	AK148881|Scn3a|20269|sodium channel, voltage-gated, type III, alpha	NM_018732|Scn3a|20269|sodium channel, voltage-gated, type III, alpha
mm9_v1_chr5_-_23122181_23122418	0.629891	GUCAGUU	AB006036|Srpk2|20817|serine/arginine-rich protein specific kinase 2	BC020178|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK136861|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK169580|Srpk2|20817|serine/arginine-rich protein specific kinase 2	NM_009274|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chr6_-_112897259_112897274	0.57389	GUCAGUU	AK045508|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	AK051262|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	NM_080448|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr15_-_103045710_103045798	0.548312	GUCAGUU	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr2_+_68699498_68699613	0.53238	GUCAGUU	AK081354|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK135798|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK151848|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK152417|Lass6|241447|LAG1 homolog, ceramide synthase 6	BC057629|Lass6|241447|LAG1 homolog, ceramide synthase 6	AK028849|Lass6|241447|LAG1 homolog, ceramide synthase 6	NM_172856|Lass6|241447|LAG1 homolog, ceramide synthase 6
mm9_v1_chr3_+_109143558_109143678	0.468905	GUCAGUU	AK033253|Vav3|57257|vav 3 oncogene	NM_020505|Vav3|57257|vav 3 oncogene	AK041249|Vav3|57257|vav 3 oncogene
mm9_v1_chr12_+_89961317_89961336	0.458113	GUCAGUU	AK078216|Nrxn3|18191|neurexin III	AK082055|Nrxn3|18191|neurexin III	NM_001198587|Nrxn3|18191|neurexin III	AK149250|Nrxn3|18191|neurexin III
mm9_v1_chr3_-_19062922_19063101	0.426365	GUCAGUU	AK208595|Armc1|74252|armadillo repeat containing 1	AK213606|Armc1|74252|armadillo repeat containing 1	AK144184|Armc1|74252|armadillo repeat containing 1	AK079299|Armc1|74252|armadillo repeat containing 1	AK167233|Armc1|74252|armadillo repeat containing 1	BC051067|Armc1|74252|armadillo repeat containing 1	BC021451|Armc1|74252|armadillo repeat containing 1	NM_028840|Armc1|74252|armadillo repeat containing 1	AK009402|Armc1|74252|armadillo repeat containing 1	AK082783|Armc1|74252|armadillo repeat containing 1	AK145993|Armc1|74252|armadillo repeat containing 1
mm9_v1_chr1_-_137327006_137327084	0.421519	GUCAGUU	AJ309238|Ipo9|226432|importin 9	AF273672|Ipo9|226432|importin 9	AF273673|Ipo9|226432|importin 9	AK036687|Ipo9|226432|importin 9	BC098508|Ipo9|226432|importin 9	BC056469|Ipo9|226432|importin 9	BC079546|Ipo9|226432|importin 9	NM_153774|Ipo9|226432|importin 9
mm9_v1_chr5_+_123300153_123300232	0.416545	GUCAGUU	AK132330|Rnf34|80751|ring finger protein 34	BC004042|Rnf34|80751|ring finger protein 34	NM_030564|Rnf34|80751|ring finger protein 34	AK045696|Rnf34|80751|ring finger protein 34	AK046381|Rnf34|80751|ring finger protein 34	AK077221|Rnf34|80751|ring finger protein 34	AK150976|Rnf34|80751|ring finger protein 34	AK046274|Rnf34|80751|ring finger protein 34	AK159753|Rnf34|80751|ring finger protein 34	AK137606|Rnf34|80751|ring finger protein 34
mm9_v1_chr11_-_76577056_76577075	0.412619	GUCAGUU	BC008542|Gosr1|53334|golgi SNAP receptor complex member 1	NM_016810|Gosr1|53334|golgi SNAP receptor complex member 1	AK134515|Gosr1|53334|golgi SNAP receptor complex member 1	AK133836|Gosr1|53334|golgi SNAP receptor complex member 1	AK161386|Gosr1|53334|golgi SNAP receptor complex member 1	AF079901|Gosr1|53334|golgi SNAP receptor complex member 1	BC051661|Gosr1|53334|golgi SNAP receptor complex member 1
mm9_v1_chr2_-_125684720_125684819	0.410921	GUCAGUU	AF071312|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	BC023096|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AF087688|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK145225|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK146153|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK132207|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK084421|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK010383|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK037757|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK132776|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	NM_009939|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm9_v1_chr5_+_53981453_53981812	0.397861	GUCAGUU	NM_009035|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region	S63463|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region	AK152746|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region	X17459|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region	AK028363|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region	AK132145|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region	AK139087|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region	NM_001080927|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region
mm9_v1_chr17_+_3114963_3115105	0.379334	GUCAGUU	AK157957|Scaf8|106583|SR-related CTD-associated factor 8	AK042381|Scaf8|106583|SR-related CTD-associated factor 8	NM_134123|Scaf8|106583|SR-related CTD-associated factor 8	BC075621|Scaf8|106583|SR-related CTD-associated factor 8	AK122451|Scaf8|106583|SR-related CTD-associated factor 8
mm9_v1_chrX_-_50723622_50723678	0.378396	GUCAGUU	BC100442|Mospd1|70380|motile sperm domain containing 1	BC018329|Mospd1|70380|motile sperm domain containing 1	BC085100|Mospd1|70380|motile sperm domain containing 1	AK007533|Mospd1|70380|motile sperm domain containing 1	NM_027409|Mospd1|70380|motile sperm domain containing 1	AK088275|Mospd1|70380|motile sperm domain containing 1	AK139795|Mospd1|70380|motile sperm domain containing 1
mm9_v1_chr2_-_6805937_6806041	0.376467	GUCAGUU	AK042749|Celf2|14007|CUGBP, Elav-like family member 2	AK164112|Celf2|14007|CUGBP, Elav-like family member 2	AK052102|Celf2|14007|CUGBP, Elav-like family member 2	AK135166|Celf2|14007|CUGBP, Elav-like family member 2	BC026856|Celf2|14007|CUGBP, Elav-like family member 2	AF090697|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110228|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160293|Celf2|14007|CUGBP, Elav-like family member 2	NM_010160|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr19_-_19185685_19185685	0.372012	GUCAGUU	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr9_+_54997159_54997206	0.369506	GUCAGUU	AK042515|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	NM_180600|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	AK083216|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2
mm9_v1_chr3_-_119486305_119486325	0.365328	GUCAGUU	AK135738|Ptbp2|56195|polypyrimidine tract binding protein 2	NM_019550|Ptbp2|56195|polypyrimidine tract binding protein 2
mm9_v1_chrX_+_131252456_131252527	0.362132	GUCAGUU	NM_001166377|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166378|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166379|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166380|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_030066|Armcx1|78248|armadillo repeat containing, X-linked 1	BC026488|Armcx1|78248|armadillo repeat containing, X-linked 1	AK147002|Armcx1|78248|armadillo repeat containing, X-linked 1	BC068228|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr6_-_116623789_116623853	0.361775	GUCAGUU	AK139284|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	AK170955|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	BC023245|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	AK089460|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	BC060709|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	AK036528|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	AK053578|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	AK151561|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	AK152639|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	AK164357|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	AK160584|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	AK171198|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4	NM_178045|Rassf4|213391|Ras association (RalGDS/AF-6) domain family member 4
mm9_v1_chr9_+_113721698_113721717	0.358845	GUCAGUU	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr3_+_84756090_84756352	0.356787	GUCAGUU	AF391192|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_080428|Fbxw7|50754|F-box and WD-40 domain protein 7	AF427101|Fbxw7|50754|F-box and WD-40 domain protein 7	BC131648|Fbxw7|50754|F-box and WD-40 domain protein 7	AB221593|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr11_-_20149322_20149457	0.356726	GUCAGUU	AK205251|Cep68|216543|centrosomal protein 68	AK172975|Cep68|216543|centrosomal protein 68	AK146669|Cep68|216543|centrosomal protein 68	AK145286|Cep68|216543|centrosomal protein 68	AK172304|Cep68|216543|centrosomal protein 68	AK169934|Cep68|216543|centrosomal protein 68	AK031622|Cep68|216543|centrosomal protein 68	BC027174|Cep68|216543|centrosomal protein 68	AK140820|Cep68|216543|centrosomal protein 68	NM_172260|Cep68|216543|centrosomal protein 68	AK162594|Cep68|216543|centrosomal protein 68
mm9_v1_chr10_+_17516024_17516131	0.356445	GUCAGUU	AK084639|Txlnb|378431|taxilin beta	NM_138628|Txlnb|378431|taxilin beta	AK084579|Txlnb|378431|taxilin beta	AK052324|Txlnb|378431|taxilin beta	AF422244|Txlnb|378431|taxilin beta	AF422245|Txlnb|378431|taxilin beta	AK137442|Txlnb|378431|taxilin beta	BC141023|Txlnb|378431|taxilin beta	AK085904|Txlnb|378431|taxilin beta
mm9_v1_chr19_-_46470175_46470258	0.348058	GUCAGUU	BC007131|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK010632|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AB010297|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_016860|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK019518|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK168889|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK088062|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK167450|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK162248|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
mm9_v1_chrX_+_133584130_133584209	0.346669	GUCAGUU	AK154624|Fam199x|245622|family with sequence similarity 199, X-linked	NM_146261|Fam199x|245622|family with sequence similarity 199, X-linked	BC031748|Fam199x|245622|family with sequence similarity 199, X-linked	AK039695|Fam199x|245622|family with sequence similarity 199, X-linked
mm9_v1_chr17_+_71965554_71965636	0.328092	GUCAGUU	NM_175639|Wdr43|72515|WD repeat domain 43	AK012043|Wdr43|72515|WD repeat domain 43	AK152321|Wdr43|72515|WD repeat domain 43	AK032907|Wdr43|72515|WD repeat domain 43	AK080660|Wdr43|72515|WD repeat domain 43	AK129031|Wdr43|72515|WD repeat domain 43
mm9_v1_chr1_+_148342795_148342819	0.32553	GUCAGUU	AK046878|Fam5c|215378|family with sequence similarity 5, member C	NM_153539|Fam5c|215378|family with sequence similarity 5, member C	BC099956|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr12_+_66137309_66137322	0.32402	GUCAGUU	AK154170|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)	NM_177806|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm9_v1_chr15_+_99532698_99532771	0.319947	GUCAGUU	NM_031842|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC059921|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	M25773|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66620|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC079839|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr10_+_52410306_52410508	0.319836	GUCAGUU	NM_178675|Slc35f1|215085|solute carrier family 35, member F1	AK038601|Slc35f1|215085|solute carrier family 35, member F1	AK053426|Slc35f1|215085|solute carrier family 35, member F1	AK139331|Slc35f1|215085|solute carrier family 35, member F1	AK048957|Slc35f1|215085|solute carrier family 35, member F1	AK165021|Slc35f1|215085|solute carrier family 35, member F1	AK053545|Slc35f1|215085|solute carrier family 35, member F1	AK083768|Slc35f1|215085|solute carrier family 35, member F1	AK166268|Slc35f1|215085|solute carrier family 35, member F1	BC059075|Slc35f1|215085|solute carrier family 35, member F1	AK163806|Slc35f1|215085|solute carrier family 35, member F1
mm9_v1_chr16_+_17070249_17070422	0.319776	GUCAGUU	AK011452|Ypel1|106369|yippee-like 1 (Drosophila)	AK076063|Ypel1|106369|yippee-like 1 (Drosophila)	AK133401|Ypel1|106369|yippee-like 1 (Drosophila)	AF190624|Ypel1|106369|yippee-like 1 (Drosophila)	BC049737|Ypel1|106369|yippee-like 1 (Drosophila)	AK139453|Ypel1|106369|yippee-like 1 (Drosophila)	AK006137|Ypel1|106369|yippee-like 1 (Drosophila)	AK006858|Ypel1|106369|yippee-like 1 (Drosophila)	AK005955|Ypel1|106369|yippee-like 1 (Drosophila)	AK006049|Ypel1|106369|yippee-like 1 (Drosophila)	AK019819|Ypel1|106369|yippee-like 1 (Drosophila)	AK014931|Ypel1|106369|yippee-like 1 (Drosophila)	NM_023249|Ypel1|106369|yippee-like 1 (Drosophila)	AK018910|Ypel1|106369|yippee-like 1 (Drosophila)	AK006505|Ypel1|106369|yippee-like 1 (Drosophila)
mm9_v1_chr7_-_144506112_144506127	0.319122	GUCAGUU	AK220542|Ebf3|13593|early B-cell factor 3	NM_001113414|Ebf3|13593|early B-cell factor 3	NM_001113415|Ebf3|13593|early B-cell factor 3	NM_010096|Ebf3|13593|early B-cell factor 3
mm9_v1_chr6_-_83391623_83391671	0.316095	GUCAGUU	AK044758|Tet3|194388|tet oncogene family member 3	AK046543|Tet3|194388|tet oncogene family member 3	AK046552|Tet3|194388|tet oncogene family member 3	AK046553|Tet3|194388|tet oncogene family member 3	NM_183138|Tet3|194388|tet oncogene family member 3
mm9_v1_chr2_-_44968728_44968798	0.314461	GUCAGUU	AJ535782|Zeb2|24136|zinc finger E-box binding homeobox 2	AK031541|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535780|Zeb2|24136|zinc finger E-box binding homeobox 2	NM_015753|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr2_+_119722957_119723040	0.312393	GUCAGUU	AK046252|Mga|29808|MAX gene associated	NM_001164274|Mga|29808|MAX gene associated	NM_013720|Mga|29808|MAX gene associated	AK162302|Mga|29808|MAX gene associated	AK032570|Mga|29808|MAX gene associated	AK012050|Mga|29808|MAX gene associated	AK139919|Mga|29808|MAX gene associated	AK172962|Mga|29808|MAX gene associated
mm9_v1_chr19_-_5912757_5912865	0.307365	GUCAGUU	U10435|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK215194|Dpf2|19708|D4, zinc and double PHD fingers family 2	BC012709|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK138047|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144848|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK019051|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144106|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK004812|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144954|Dpf2|19708|D4, zinc and double PHD fingers family 2	U43921|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK145851|Dpf2|19708|D4, zinc and double PHD fingers family 2	NM_011262|Dpf2|19708|D4, zinc and double PHD fingers family 2
mm9_v1_chr11_-_61668486_61668601	0.30118	GUCAGUU	AF145922|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	BC046778|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	BC053029|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK146620|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK122331|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK146893|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK148142|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	NM_013881|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)
mm9_v1_chr2_+_4322020_4322021	0.300072	GUCAGUU	BC082808|Frmd4a|209630|FERM domain containing 4A	NM_001177843|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr12_+_82127791_82127817	0.295735	GUCAGUU	AK040931|Smoc1|64075|SPARC related modular calcium binding 1	NM_001146217|Smoc1|64075|SPARC related modular calcium binding 1	NM_022316|Smoc1|64075|SPARC related modular calcium binding 1	BC031804|Smoc1|64075|SPARC related modular calcium binding 1	AF070470|Smoc1|64075|SPARC related modular calcium binding 1
mm9_v1_chr2_+_37298785_37298902	0.289148	GUCAGUU	NM_146121|Rabgap1|227800|RAB GTPase activating protein 1	AK031315|Rabgap1|227800|RAB GTPase activating protein 1	AK021286|Rabgap1|227800|RAB GTPase activating protein 1	BC138337|Rabgap1|227800|RAB GTPase activating protein 1
mm9_v1_chrX_+_162782484_162782852	0.285923	GUCAGUU	NM_001177955|Gpm6b|14758|glycoprotein m6b	NM_001177956|Gpm6b|14758|glycoprotein m6b	NM_001177957|Gpm6b|14758|glycoprotein m6b	NM_001177958|Gpm6b|14758|glycoprotein m6b	NM_001177959|Gpm6b|14758|glycoprotein m6b	NM_001177960|Gpm6b|14758|glycoprotein m6b	AF254869|Gpm6b|14758|glycoprotein m6b	AF254870|Gpm6b|14758|glycoprotein m6b	AF254872|Gpm6b|14758|glycoprotein m6b	AF254873|Gpm6b|14758|glycoprotein m6b	AF254874|Gpm6b|14758|glycoprotein m6b	AF254875|Gpm6b|14758|glycoprotein m6b	AF254878|Gpm6b|14758|glycoprotein m6b	AF254879|Gpm6b|14758|glycoprotein m6b	AK013660|Gpm6b|14758|glycoprotein m6b	AK140714|Gpm6b|14758|glycoprotein m6b	S65737|Gpm6b|14758|glycoprotein m6b
mm9_v1_chr16_+_20517042_20517258	0.285449	GUCAGUU	U41285|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)	AK052151|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)	NM_007889|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)	BC033414|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)
mm9_v1_chr5_+_65522325_65522469	0.281381	GUCAGUU	BC057606|Klhl5|71778|kelch-like 5 (Drosophila)	NM_175174|Klhl5|71778|kelch-like 5 (Drosophila)
mm9_v1_chr1_+_148344816_148344867	0.277104	GUCAGUU	NM_001145807|Fam5c|215378|family with sequence similarity 5, member C	AK083233|Fam5c|215378|family with sequence similarity 5, member C	BC030498|Fam5c|215378|family with sequence similarity 5, member C	AK140520|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr6_+_34426352_34426399	0.272121	GUCAGUU	AK037239|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK078119|Bpgm|12183|2,3-bisphosphoglycerate mutase	NM_007563|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK171685|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK211952|Bpgm|12183|2,3-bisphosphoglycerate mutase
mm9_v1_chr9_-_66767436_66767566	0.270625	GUCAGUU	AB232601|Rab8b|235442|RAB8B, member RAS oncogene family	AK031251|Rab8b|235442|RAB8B, member RAS oncogene family	BC157974|Rab8b|235442|RAB8B, member RAS oncogene family	AK051218|Rab8b|235442|RAB8B, member RAS oncogene family	AK084650|Rab8b|235442|RAB8B, member RAS oncogene family	AK155621|Rab8b|235442|RAB8B, member RAS oncogene family	BC059208|Rab8b|235442|RAB8B, member RAS oncogene family	NM_173413|Rab8b|235442|RAB8B, member RAS oncogene family
mm9_v1_chr11_-_74537877_74537918	0.263602	GUCAGUU	NM_013625|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm9_v1_chr19_+_5366812_5366812	0.263416	GUCAGUU	BC024640|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	NM_027236|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing
mm9_v1_chrX_-_163820597_163820686	0.262485	GUCAGUU	AK019169|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK215156|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	BC024942|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK045007|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	NM_026662|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK029690|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK012819|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2
mm9_v1_chr13_+_91600662_91600791	0.25956	GUCAGUU	BC002176|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024186|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024272|Ssbp2|66970|single-stranded DNA binding protein 2	AK133699|Ssbp2|66970|single-stranded DNA binding protein 2	AK051840|Ssbp2|66970|single-stranded DNA binding protein 2	AK010220|Ssbp2|66970|single-stranded DNA binding protein 2	AY037837|Ssbp2|66970|single-stranded DNA binding protein 2	AK005150|Ssbp2|66970|single-stranded DNA binding protein 2	AK013177|Ssbp2|66970|single-stranded DNA binding protein 2	AY167988|Ssbp2|66970|single-stranded DNA binding protein 2
mm9_v1_chr9_+_21351307_21351499	0.257749	GUCAGUU	NM_021531|Carm1|59035|coactivator-associated arginine methyltransferase 1	NM_153141|Carm1|59035|coactivator-associated arginine methyltransferase 1	BC036974|Carm1|59035|coactivator-associated arginine methyltransferase 1	AK158242|Carm1|59035|coactivator-associated arginine methyltransferase 1	BC071267|Carm1|59035|coactivator-associated arginine methyltransferase 1	AF117887|Carm1|59035|coactivator-associated arginine methyltransferase 1	AK158757|Carm1|59035|coactivator-associated arginine methyltransferase 1
mm9_v1_chrX_+_34414293_34414386	0.246826	GUCAGUU	AK163966|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AF089812|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AF383148|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK133723|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK160538|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK164074|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK160545|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	NM_019668|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK160527|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	BC026053|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK150417|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK153327|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)
mm9_v1_chr3_-_108525202_108525224	0.242899	GUCAGUU	AK143552|Gpsm2|76123|G-protein signalling modulator 2 (AGS3-like, C. elegans)	NM_029522|Gpsm2|76123|G-protein signalling modulator 2 (AGS3-like, C. elegans)
mm9_v1_chrX_+_97972559_97972657	0.241978	GUCAGUU	NM_001177780|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK159655|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK167365|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK148464|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chr11_+_44332426_44332513	0.232949	GUCAGUU	AK014408|Rnf145|74315|ring finger protein 145	NM_028862|Rnf145|74315|ring finger protein 145	AK043002|Rnf145|74315|ring finger protein 145
mm9_v1_chr3_+_88101037_88101138	0.232744	GUCAGUU	AK031293|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158223|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK089548|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK146360|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK161630|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK171160|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	NM_009836|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	Z31556|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC054776|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK168052|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC139465|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC139467|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK154043|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158254|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158272|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK156836|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)
mm9_v1_chr11_-_90499370_90499421	0.230571	GUCAGUU	BC032881|Stxbp4|20913|syntaxin binding protein 4	AK012293|Stxbp4|20913|syntaxin binding protein 4	AK032998|Stxbp4|20913|syntaxin binding protein 4	AK049001|Stxbp4|20913|syntaxin binding protein 4	NM_011505|Stxbp4|20913|syntaxin binding protein 4
mm9_v1_chr14_+_27852148_27852279	0.230362	GUCAGUU	AF494210|Il17rd|171463|interleukin 17 receptor D	NM_134437|Il17rd|171463|interleukin 17 receptor D	BC138629|Il17rd|171463|interleukin 17 receptor D	BC066804|Il17rd|171463|interleukin 17 receptor D	AF459444|Il17rd|171463|interleukin 17 receptor D
mm9_v1_chr15_-_89422293_89422353	0.229336	GUCAGUU	AK170205|Rabl2|68708|RAB, member of RAS oncogene family-like 2	AK004012|Rabl2|68708|RAB, member of RAS oncogene family-like 2	BC030376|Rabl2|68708|RAB, member of RAS oncogene family-like 2	AK051232|Rabl2|68708|RAB, member of RAS oncogene family-like 2	NM_026817|Rabl2|68708|RAB, member of RAS oncogene family-like 2
mm9_v1_chr1_+_129670740_129670806	0.228784	GUCAGUU	BC054122|Ccnt2|72949|cyclin T2	NM_028399|Ccnt2|72949|cyclin T2	AK156231|Ccnt2|72949|cyclin T2	AK154439|Ccnt2|72949|cyclin T2	AK156621|Ccnt2|72949|cyclin T2	AK152399|Ccnt2|72949|cyclin T2	AK036772|Ccnt2|72949|cyclin T2	AK013634|Ccnt2|72949|cyclin T2	AK049863|Ccnt2|72949|cyclin T2
mm9_v1_chr3_+_121977291_121977338	0.228475	GUCAGUU	AK133904|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	AK168536|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	AK135957|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	BC028305|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	NM_153806|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2	AK016368|Dnttip2|99480|deoxynucleotidyltransferase, terminal, interacting protein 2
mm9_v1_chr4_+_6292817_6292904	0.227714	GUCAGUU	AK169415|Sdcbp|53378|syndecan binding protein	NM_001098227|Sdcbp|53378|syndecan binding protein	NM_016807|Sdcbp|53378|syndecan binding protein	AK033412|Sdcbp|53378|syndecan binding protein	AF003693|Sdcbp|53378|syndecan binding protein	AK150721|Sdcbp|53378|syndecan binding protein	AK152080|Sdcbp|53378|syndecan binding protein	AK159677|Sdcbp|53378|syndecan binding protein	AK150623|Sdcbp|53378|syndecan binding protein	AK152552|Sdcbp|53378|syndecan binding protein	AK153112|Sdcbp|53378|syndecan binding protein	AK169219|Sdcbp|53378|syndecan binding protein	AK045668|Sdcbp|53378|syndecan binding protein	AK168004|Sdcbp|53378|syndecan binding protein	AK028429|Sdcbp|53378|syndecan binding protein	AK146085|Sdcbp|53378|syndecan binding protein	AK150544|Sdcbp|53378|syndecan binding protein	AK150996|Sdcbp|53378|syndecan binding protein	AK151050|Sdcbp|53378|syndecan binding protein	AK152017|Sdcbp|53378|syndecan binding protein	AK152434|Sdcbp|53378|syndecan binding protein	AK153042|Sdcbp|53378|syndecan binding protein	AK159538|Sdcbp|53378|syndecan binding protein	AK169687|Sdcbp|53378|syndecan binding protein	AK171162|Sdcbp|53378|syndecan binding protein	AK150707|Sdcbp|53378|syndecan binding protein	AK152001|Sdcbp|53378|syndecan binding protein	AK152577|Sdcbp|53378|syndecan binding protein	AK152855|Sdcbp|53378|syndecan binding protein	AK152109|Sdcbp|53378|syndecan binding protein	AK150801|Sdcbp|53378|syndecan binding protein	AK014678|Sdcbp|53378|syndecan binding protein	AK150321|Sdcbp|53378|syndecan binding protein	AK150661|Sdcbp|53378|syndecan binding protein	AK150736|Sdcbp|53378|syndecan binding protein	AK159124|Sdcbp|53378|syndecan binding protein	AK165657|Sdcbp|53378|syndecan binding protein	AK167513|Sdcbp|53378|syndecan binding protein	AK168777|Sdcbp|53378|syndecan binding protein	BC019400|Sdcbp|53378|syndecan binding protein	AK150278|Sdcbp|53378|syndecan binding protein	AF077527|Sdcbp|53378|syndecan binding protein	AK159323|Sdcbp|53378|syndecan binding protein
mm9_v1_chr11_-_95867076_95867257	0.226059	GUCAGUU	AF061569|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	AK044850|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	AK013940|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	BC051679|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	NM_009951|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1
mm9_v1_chr2_+_48669628_48669670	0.220481	GUCAGUU	NM_007396|Acvr2a|11480|activin receptor IIA	AK081022|Acvr2a|11480|activin receptor IIA
mm9_v1_chrX_+_139952975_139953253	0.219995	GUCAGUU	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr7_-_88974235_88974382	0.219136	GUCAGUU	BC072618|Btbd1|83962|BTB (POZ) domain containing 1	NM_146193|Btbd1|83962|BTB (POZ) domain containing 1	BC087937|Btbd1|83962|BTB (POZ) domain containing 1	AK088345|Btbd1|83962|BTB (POZ) domain containing 1
mm9_v1_chr9_-_61794540_61794605	0.216261	GUCAGUU	AK013939|Kif23|71819|kinesin family member 23	AK164409|Kif23|71819|kinesin family member 23	BC047273|Kif23|71819|kinesin family member 23	BC003363|Kif23|71819|kinesin family member 23	AK030771|Kif23|71819|kinesin family member 23	NM_024245|Kif23|71819|kinesin family member 23
mm9_v1_chr7_-_112900699_112900744	0.215388	GUCAGUU	AJ011912|Tpp1|12751|tripeptidyl peptidase I	BC024820|Tpp1|12751|tripeptidyl peptidase I	AK170781|Tpp1|12751|tripeptidyl peptidase I	AK146759|Tpp1|12751|tripeptidyl peptidase I	AK048279|Tpp1|12751|tripeptidyl peptidase I	NM_009906|Tpp1|12751|tripeptidyl peptidase I	AK083832|Tpp1|12751|tripeptidyl peptidase I	AK169924|Tpp1|12751|tripeptidyl peptidase I	AF111172|Tpp1|12751|tripeptidyl peptidase I	AK155021|Tpp1|12751|tripeptidyl peptidase I	AK002418|Tpp1|12751|tripeptidyl peptidase I	AK165669|Tpp1|12751|tripeptidyl peptidase I
mm9_v1_chr2_-_48804672_48804789	0.214646	GUCAGUU	BC019748|Orc4|26428|origin recognition complex, subunit 4	BC015072|Orc4|26428|origin recognition complex, subunit 4	AJ003140|Orc4|26428|origin recognition complex, subunit 4	AK011550|Orc4|26428|origin recognition complex, subunit 4	AK012669|Orc4|26428|origin recognition complex, subunit 4	AK049534|Orc4|26428|origin recognition complex, subunit 4	AK084326|Orc4|26428|origin recognition complex, subunit 4	AK010258|Orc4|26428|origin recognition complex, subunit 4	AK169291|Orc4|26428|origin recognition complex, subunit 4	AK076324|Orc4|26428|origin recognition complex, subunit 4	NM_001177313|Orc4|26428|origin recognition complex, subunit 4	NM_011958|Orc4|26428|origin recognition complex, subunit 4
mm9_v1_chr2_-_136213509_136213702	0.214517	GUCAGUU	AK163530|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK032593|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK079080|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK013814|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	BC099417|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK077967|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	NM_172858|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7
mm9_v1_chr3_+_157699644_157699694	0.210304	GUCAGUU	AK152244|Lrrc40|67144|leucine rich repeat containing 40	AK011726|Lrrc40|67144|leucine rich repeat containing 40	AK170052|Lrrc40|67144|leucine rich repeat containing 40	AK034978|Lrrc40|67144|leucine rich repeat containing 40	NM_024194|Lrrc40|67144|leucine rich repeat containing 40	AK017814|Lrrc40|67144|leucine rich repeat containing 40	AK163288|Lrrc40|67144|leucine rich repeat containing 40	AK148748|Lrrc40|67144|leucine rich repeat containing 40
mm9_v1_chr5_-_5380077_5380250	0.209006	GUCAGUU	AK129226|Cdk14|18647|cyclin-dependent kinase 14	AK016370|Cdk14|18647|cyclin-dependent kinase 14	AK051411|Cdk14|18647|cyclin-dependent kinase 14	AK083790|Cdk14|18647|cyclin-dependent kinase 14	AF033655|Cdk14|18647|cyclin-dependent kinase 14	AK051283|Cdk14|18647|cyclin-dependent kinase 14	AK045083|Cdk14|18647|cyclin-dependent kinase 14	NM_011074|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr2_-_144376513_144376606	0.207259	GUCAGUU	AF039563|Rbbp9|26450|retinoblastoma binding protein 9	BC050201|Rbbp9|26450|retinoblastoma binding protein 9	AK017606|Rbbp9|26450|retinoblastoma binding protein 9	BC011107|Rbbp9|26450|retinoblastoma binding protein 9	BC147814|Rbbp9|26450|retinoblastoma binding protein 9	BC147815|Rbbp9|26450|retinoblastoma binding protein 9	AK076944|Rbbp9|26450|retinoblastoma binding protein 9	NM_015754|Rbbp9|26450|retinoblastoma binding protein 9
mm9_v1_chrX_-_91368713_91368747	0.201937	GUCAGUU	L19714|Zfx|22764|zinc finger protein X-linked	AK145115|Zfx|22764|zinc finger protein X-linked	NM_001044386|Zfx|22764|zinc finger protein X-linked	NM_011768|Zfx|22764|zinc finger protein X-linked
mm9_v1_chrX_+_97925185_97925339	0.200877	GUCAGUU	NM_023608|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	AK031379|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	BC038274|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	AB048364|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2
mm9_v1_chr5_+_34678976_34679138	0.200859	GUCAGUU	AK133924|Rnf4|19822|ring finger protein 4	AK159949|Rnf4|19822|ring finger protein 4	AK090162|Rnf4|19822|ring finger protein 4	NM_011278|Rnf4|19822|ring finger protein 4	AK147057|Rnf4|19822|ring finger protein 4	AK158987|Rnf4|19822|ring finger protein 4	AK019171|Rnf4|19822|ring finger protein 4	AK159296|Rnf4|19822|ring finger protein 4	AK151116|Rnf4|19822|ring finger protein 4	AK159778|Rnf4|19822|ring finger protein 4	AF169300|Rnf4|19822|ring finger protein 4	BC003282|Rnf4|19822|ring finger protein 4	AK145596|Rnf4|19822|ring finger protein 4	AK179891|Rnf4|19822|ring finger protein 4	AK207872|Rnf4|19822|ring finger protein 4	AK219295|Rnf4|19822|ring finger protein 4
mm9_v1_chr13_+_113254277_113254381	0.200251	GUCAGUU	NM_010560|Il6st|16195|interleukin 6 signal transducer	BC058679|Il6st|16195|interleukin 6 signal transducer	AK170020|Il6st|16195|interleukin 6 signal transducer	BC020454|Il6st|16195|interleukin 6 signal transducer
mm9_v1_chr13_+_40982534_40982735	0.198749	GUCAGUU	NM_008105|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK080061|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK054226|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AB037597|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435149|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr8_-_63433528_63433596	0.198176	GUCAGUU	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr1_-_158869650_158869756	0.197731	GUCAGUU	BC043132|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	BC052663|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK169368|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK018622|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029049|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK033549|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK161080|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029993|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK036803|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159965|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159967|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159968|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_023884|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr8_+_59029896_59029998	0.197587	GUCAGUU	AK077595|Fbxo8|50753|F-box protein 8	AK078111|Fbxo8|50753|F-box protein 8	AK012401|Fbxo8|50753|F-box protein 8	AK147748|Fbxo8|50753|F-box protein 8	AK162592|Fbxo8|50753|F-box protein 8	AK002538|Fbxo8|50753|F-box protein 8	BC011100|Fbxo8|50753|F-box protein 8	AF176527|Fbxo8|50753|F-box protein 8	AK029989|Fbxo8|50753|F-box protein 8	NM_015791|Fbxo8|50753|F-box protein 8	AK160145|Fbxo8|50753|F-box protein 8	BC034854|Fbxo8|50753|F-box protein 8
mm9_v1_chr8_-_60131768_60131885	0.195416	GUCAGUU	AF349573|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK030683|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK033427|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK036523|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	BC052461|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	AK041791|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	NM_001167981|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	NM_144731|Galnt7|108150|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
mm9_v1_chr10_-_82996846_82996884	0.19389	GUCAGUU	AK141954|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2	NM_153543|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2
mm9_v1_chr4_-_109149038_109149266	0.192737	GUCAGUU	BC010299|Rnf11|29864|ring finger protein 11	NM_013876|Rnf11|29864|ring finger protein 11	AK014254|Rnf11|29864|ring finger protein 11
mm9_v1_chr10_+_69903415_69903494	0.190821	GUCAGUU	AK081939|Fam13c|71721|family with sequence similarity 13, member C	NM_001143777|Fam13c|71721|family with sequence similarity 13, member C	AK036299|Fam13c|71721|family with sequence similarity 13, member C	AK039513|Fam13c|71721|family with sequence similarity 13, member C	AK044049|Fam13c|71721|family with sequence similarity 13, member C
mm9_v1_chr9_-_53475610_53475616	0.189969	GUCAGUU	AK031955|Cul5|75717|cullin 5	NM_001161618|Cul5|75717|cullin 5	NM_027807|Cul5|75717|cullin 5
mm9_v1_chr14_+_61253517_61253607	0.187892	GUCAGUU	NM_001033272|Spata13|219140|spermatogenesis associated 13
mm9_v1_chr10_+_82321923_82322011	0.187509	GUCAGUU	AB027565|Txnrd1|50493|thioredoxin reductase 1	AK151927|Txnrd1|50493|thioredoxin reductase 1	NM_001042513|Txnrd1|50493|thioredoxin reductase 1	NM_015762|Txnrd1|50493|thioredoxin reductase 1	AK146125|Txnrd1|50493|thioredoxin reductase 1	AK149625|Txnrd1|50493|thioredoxin reductase 1	AK168356|Txnrd1|50493|thioredoxin reductase 1	AK011902|Txnrd1|50493|thioredoxin reductase 1	AK186760|Txnrd1|50493|thioredoxin reductase 1	AK186897|Txnrd1|50493|thioredoxin reductase 1	AK194169|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr14_-_52898946_52899069	0.18374	GUCAGUU	AK044202|Rab2b|76338|RAB2B, member RAS oncogene family	BC033312|Rab2b|76338|RAB2B, member RAS oncogene family	AK005230|Rab2b|76338|RAB2B, member RAS oncogene family	BC054719|Rab2b|76338|RAB2B, member RAS oncogene family	AK038393|Rab2b|76338|RAB2B, member RAS oncogene family	AK038576|Rab2b|76338|RAB2B, member RAS oncogene family	AK169657|Rab2b|76338|RAB2B, member RAS oncogene family	BC046334|Rab2b|76338|RAB2B, member RAS oncogene family	NM_172601|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr1_+_70772288_70772496	0.183124	GUCAGUU	BC094541|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	NM_177164|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK083856|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	BC064448|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK080585|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like
mm9_v1_chr15_+_6658368_6658402	0.182315	GUCAGUU	AK029196|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036149|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036492|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK082586|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK087858|Rictor|78757|RPTOR independent companion of MTOR, complex 2	NM_030168|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY540053|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120903|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120904|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK019537|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK054119|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY497009|Rictor|78757|RPTOR independent companion of MTOR, complex 2
mm9_v1_chr9_+_74885522_74885560	0.179267	GUCAGUU	BC040206|Arpp19|59046|cAMP-regulated phosphoprotein 19	NM_021548|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr2_-_37214772_37214851	0.178407	GUCAGUU	AK004704|Pdcl|67466|phosducin-like	NM_026176|Pdcl|67466|phosducin-like
mm9_v1_chr18_+_85020800_85020860	0.177894	GUCAGUU	BC024341|Cyb5|109672|cytochrome b-5	AK002426|Cyb5|109672|cytochrome b-5	AK013210|Cyb5|109672|cytochrome b-5	NM_025797|Cyb5|109672|cytochrome b-5
mm9_v1_chr9_-_82869081_82869124	0.177779	GUCAGUU	NM_001081216|Phip|83946|pleckstrin homology domain interacting protein	AK032797|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr2_-_131970786_131970867	0.174859	GUCAGUU	AY004874|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	AK087175|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	AK169991|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	NM_018824|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2
mm9_v1_chr4_-_142802606_142802625	0.174118	GUCAGUU	AK087820|Prdm2|110593|PR domain containing 2, with ZNF domain	NM_001081355|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr16_-_33056255_33056271	0.174016	GUCAGUU	BC049990|Iqcg|69707|IQ motif containing G	AK158170|Iqcg|69707|IQ motif containing G	NM_178378|Iqcg|69707|IQ motif containing G
mm9_v1_chr1_-_12980994_12981257	0.172816	GUCAGUU	BC117943|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	BC117944|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK048882|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK041736|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	NM_172841|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK028758|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1
mm9_v1_chr2_+_173485260_173485380	0.171232	GUCAGUU	AK147619|Rab22a|19334|RAB22A, member RAS oncogene family	AK150617|Rab22a|19334|RAB22A, member RAS oncogene family	AK146594|Rab22a|19334|RAB22A, member RAS oncogene family	NM_024436|Rab22a|19334|RAB22A, member RAS oncogene family	AK021398|Rab22a|19334|RAB22A, member RAS oncogene family	AK149200|Rab22a|19334|RAB22A, member RAS oncogene family	BC006596|Rab22a|19334|RAB22A, member RAS oncogene family	AK014407|Rab22a|19334|RAB22A, member RAS oncogene family	AK031667|Rab22a|19334|RAB22A, member RAS oncogene family
mm9_v1_chr5_+_97426665_97426877	0.171151	GUCAGUU	AY050249|Bmp2k|140780|BMP2 inducible kinase	NM_080708|Bmp2k|140780|BMP2 inducible kinase	AK046752|Bmp2k|140780|BMP2 inducible kinase
mm9_v1_chr4_+_40090297_40090416	0.170631	GUCAGUU	NM_007386|Aco1|11428|aconitase 1
mm9_v1_chr1_-_135817945_135817982	0.170294	GUCAGUU	AK037150|Prelp|116847|proline arginine-rich end leucine-rich repeat	BC019775|Prelp|116847|proline arginine-rich end leucine-rich repeat	AK047480|Prelp|116847|proline arginine-rich end leucine-rich repeat	NM_054077|Prelp|116847|proline arginine-rich end leucine-rich repeat
mm9_v1_chr9_+_109834266_109834307	0.170064	GUCAGUU	NM_008633|Mtap4|17758|microtubule-associated protein 4	AK046825|Mtap4|17758|microtubule-associated protein 4
mm9_v1_chr7_-_123586952_123586976	0.16872	GUCAGUU	AK163446|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK049609|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	U52193|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK019194|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK140908|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	NM_011083|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm9_v1_chr2_-_38920925_38921012	0.167315	GUCAGUU	BC043090|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	NM_029793|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK028516|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC024637|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC053068|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK002954|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK008972|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK044987|Golga1|76899|golgi autoantigen, golgin subfamily a, 1
mm9_v1_chr10_-_116018526_116018566	0.166453	GUCAGUU	AK149767|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	BC043133|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK167834|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK202363|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK172132|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	BC063105|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK078121|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK011231|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	BC065171|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_001037846|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_001037847|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_001037848|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_028082|Cnot2|72068|CCR4-NOT transcription complex, subunit 2
mm9_v1_chr13_-_14615371_14615494	0.166425	GUCAGUU	AK051569|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK084246|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK086170|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK047678|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_001081348|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK053694|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chr13_-_111070392_111070417	0.163367	GUCAGUU	AK014050|Rab3c|67295|RAB3C, member RAS oncogene family	NM_023852|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chrX_-_130432840_130432967	0.163021	GUCAGUU	AK160313|Tspan6|56496|tetraspanin 6	AK167384|Tspan6|56496|tetraspanin 6	AK146673|Tspan6|56496|tetraspanin 6	AK149204|Tspan6|56496|tetraspanin 6	BC110314|Tspan6|56496|tetraspanin 6	BC003733|Tspan6|56496|tetraspanin 6	NM_019656|Tspan6|56496|tetraspanin 6
mm9_v1_chr5_-_151468105_151468189	0.162964	GUCAGUU	AK038740|N4bp2l2|381695|NEDD4 binding protein 2-like 2	BC037393|N4bp2l2|381695|NEDD4 binding protein 2-like 2	NM_201369|N4bp2l2|381695|NEDD4 binding protein 2-like 2
mm9_v1_chr2_+_48805027_48805131	0.160499	GUCAGUU	NM_029924|Mbd5|109241|methyl-CpG binding domain protein 5	AK155574|Mbd5|109241|methyl-CpG binding domain protein 5
mm9_v1_chr14_+_67852128_67852128	0.160351	GUCAGUU	AK053013|Ebf2|13592|early B-cell factor 2	NM_010095|Ebf2|13592|early B-cell factor 2
mm9_v1_chr15_-_36212893_36212934	0.159847	GUCAGUU	NM_013923|Rnf19a|30945|ring finger protein 19A
mm9_v1_chr19_+_45438212_45438344	0.157432	GUCAGUU	NM_001037758|Btrc|12234|beta-transducin repeat containing protein	NM_009771|Btrc|12234|beta-transducin repeat containing protein	AK220183|Btrc|12234|beta-transducin repeat containing protein	AK145624|Btrc|12234|beta-transducin repeat containing protein	AK052317|Btrc|12234|beta-transducin repeat containing protein	AK083257|Btrc|12234|beta-transducin repeat containing protein	AF081887|Btrc|12234|beta-transducin repeat containing protein	AK032221|Btrc|12234|beta-transducin repeat containing protein	AK145091|Btrc|12234|beta-transducin repeat containing protein	BC052879|Btrc|12234|beta-transducin repeat containing protein	BC003989|Btrc|12234|beta-transducin repeat containing protein	AF099932|Btrc|12234|beta-transducin repeat containing protein	AF110396|Btrc|12234|beta-transducin repeat containing protein	AF112979|Btrc|12234|beta-transducin repeat containing protein	AK180045|Btrc|12234|beta-transducin repeat containing protein	AK188552|Btrc|12234|beta-transducin repeat containing protein	AK189588|Btrc|12234|beta-transducin repeat containing protein
mm9_v1_chr4_-_107791061_107791155	0.157007	GUCAGUU	M91458|Scp2|20280|sterol carrier protein 2, liver	BC034613|Scp2|20280|sterol carrier protein 2, liver	AK004860|Scp2|20280|sterol carrier protein 2, liver	BC018384|Scp2|20280|sterol carrier protein 2, liver	NM_011327|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chr8_+_109674517_109674597	0.156734	GUCAGUU	BC054749|Cyb5b|66427|cytochrome b5 type B	BC062980|Cyb5b|66427|cytochrome b5 type B	AK003333|Cyb5b|66427|cytochrome b5 type B	AK088970|Cyb5b|66427|cytochrome b5 type B	AK165543|Cyb5b|66427|cytochrome b5 type B	AK052810|Cyb5b|66427|cytochrome b5 type B	NM_025558|Cyb5b|66427|cytochrome b5 type B	AK019263|Cyb5b|66427|cytochrome b5 type B	BC048147|Cyb5b|66427|cytochrome b5 type B	AK003815|Cyb5b|66427|cytochrome b5 type B	AK168422|Cyb5b|66427|cytochrome b5 type B	AK166544|Cyb5b|66427|cytochrome b5 type B	BC046810|Cyb5b|66427|cytochrome b5 type B	BC046479|Cyb5b|66427|cytochrome b5 type B	BC058812|Cyb5b|66427|cytochrome b5 type B
mm9_v1_chr15_+_96117952_96118007	0.156373	GUCAGUU	AK007269|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)	NM_175251|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr10_+_92623587_92623703	0.152343	GUCAGUU	AK078325|Cdk17|237459|cyclin-dependent kinase 17	NM_146239|Cdk17|237459|cyclin-dependent kinase 17	BC064815|Cdk17|237459|cyclin-dependent kinase 17
mm9_v1_chr3_-_122322556_122322614	0.150436	GUCAGUU	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr11_+_32247758_32247888	0.149678	GUCAGUU	NM_177364|Sh3pxd2b|268396|SH3 and PX domains 2B	AK169978|Sh3pxd2b|268396|SH3 and PX domains 2B	AK220175|Sh3pxd2b|268396|SH3 and PX domains 2B	AK090119|Sh3pxd2b|268396|SH3 and PX domains 2B	AK042261|Sh3pxd2b|268396|SH3 and PX domains 2B	BC141306|Sh3pxd2b|268396|SH3 and PX domains 2B	AK043324|Sh3pxd2b|268396|SH3 and PX domains 2B	AK089330|Sh3pxd2b|268396|SH3 and PX domains 2B	AK163471|Sh3pxd2b|268396|SH3 and PX domains 2B	AK171384|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115711|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115764|Sh3pxd2b|268396|SH3 and PX domains 2B	AK154898|Sh3pxd2b|268396|SH3 and PX domains 2B	AB430861|Sh3pxd2b|268396|SH3 and PX domains 2B
mm9_v1_chr1_+_162836541_162836569	0.14674	GUCAGUU	NM_001024952|Rc3h1|381305|RING CCCH (C3H) domains 1	AK139648|Rc3h1|381305|RING CCCH (C3H) domains 1
mm9_v1_chr17_+_28938070_28938070	0.145866	GUCAGUU	AK147555|Brpf3|268936|bromodomain and PHD finger containing, 3	NM_001081315|Brpf3|268936|bromodomain and PHD finger containing, 3
mm9_v1_chr11_+_93905501_93905545	0.145753	GUCAGUU	AK014060|Spag9|70834|sperm associated antigen 9	AK079365|Spag9|70834|sperm associated antigen 9	NM_001025428|Spag9|70834|sperm associated antigen 9	NM_001025429|Spag9|70834|sperm associated antigen 9	NM_001025430|Spag9|70834|sperm associated antigen 9	AK172961|Spag9|70834|sperm associated antigen 9
mm9_v1_chr1_+_179374783_179374796	0.14547	GUCAGUU	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chrX_-_34529689_34529693	0.145399	GUCAGUU	NM_001177324|Sept6|56526|septin 6	NM_019942|Sept6|56526|septin 6
mm9_v1_chr4_-_131978279_131978374	0.145237	GUCAGUU	BC096033|Phactr4|100169|phosphatase and actin regulator 4	AK049209|Phactr4|100169|phosphatase and actin regulator 4	BC075672|Phactr4|100169|phosphatase and actin regulator 4	AK220496|Phactr4|100169|phosphatase and actin regulator 4	NM_001161797|Phactr4|100169|phosphatase and actin regulator 4	NM_175306|Phactr4|100169|phosphatase and actin regulator 4
mm9_v1_chrX_+_148237785_148237953	0.145162	GUCAGUU	AK163416|Huwe1|59026|HECT, UBA and WWE domain containing 1	NM_021523|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK049460|Huwe1|59026|HECT, UBA and WWE domain containing 1	DQ097265|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK045183|Huwe1|59026|HECT, UBA and WWE domain containing 1	AY772010|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK165140|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK165648|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK031374|Huwe1|59026|HECT, UBA and WWE domain containing 1
mm9_v1_chr18_+_42435006_42435038	0.144998	GUCAGUU	NM_172626|Rbm27|225432|RNA binding motif protein 27	AY461716|Rbm27|225432|RNA binding motif protein 27
mm9_v1_chr3_-_138152336_138152369	0.143977	GUCAGUU	BC096469|Metap1|75624|methionyl aminopeptidase 1	AK077694|Metap1|75624|methionyl aminopeptidase 1	NM_175224|Metap1|75624|methionyl aminopeptidase 1	AK153944|Metap1|75624|methionyl aminopeptidase 1	AK165034|Metap1|75624|methionyl aminopeptidase 1	AK152138|Metap1|75624|methionyl aminopeptidase 1	AK153231|Metap1|75624|methionyl aminopeptidase 1
mm9_v1_chr15_-_84388245_84388282	0.143229	GUCAGUU	BC094559|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like	NM_177630|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like
mm9_v1_chr11_-_60727237_60727316	0.14295	GUCAGUU	BC034332|Gm16515|24083|predicted gene, Gm16515	BC038816|Gm16515|24083|predicted gene, Gm16515	AK004720|Gm16515|24083|predicted gene, Gm16515	AK089179|Gm16515|24083|predicted gene, Gm16515	AK080453|Gm16515|24083|predicted gene, Gm16515	NM_025294|Gm16515|24083|predicted gene, Gm16515
mm9_v1_chr1_-_65003291_65003407	0.142365	GUCAGUU	AK034959|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	BC063098|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	NM_001039493|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3
mm9_v1_chr5_-_25004598_25004626	0.140392	GUCAGUU	AK044828|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3	NM_001081383|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3	AK087368|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3
mm9_v1_chr11_+_72990584_72990782	0.139307	GUCAGUU	AK004963|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_029564|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK168533|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK170485|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK085679|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK150816|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC008166|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC094314|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3
mm9_v1_chr7_+_128061257_128061281	0.137909	GUCAGUU	AK005034|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	NM_001164096|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	NM_025298|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr4_-_138686896_138687027	0.137166	GUCAGUU	AK008362|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK008449|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK009189|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK011553|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK004466|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	BC055791|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK153063|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK167818|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK009528|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK152509|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK159100|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK030343|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	NM_001163006|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene
mm9_v1_chrX_+_103222548_103222685	0.13646	GUCAGUU	AK017506|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK033254|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_001109757|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_009726|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK155643|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK171563|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK172209|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U03434|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U71091|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	BC141395|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr2_-_72817311_72817337	0.136355	GUCAGUU	AK088238|Sp3|20687|trans-acting transcription factor 3	NM_001098425|Sp3|20687|trans-acting transcription factor 3
mm9_v1_chrX_+_45265614_45265652	0.133533	GUCAGUU	AK047906|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK035315|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK041963|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK044320|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK138269|Ocrl|320634|oculocerebrorenal syndrome of Lowe	BC068146|Ocrl|320634|oculocerebrorenal syndrome of Lowe	NM_177215|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK028306|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK044488|Ocrl|320634|oculocerebrorenal syndrome of Lowe
mm9_v1_chr6_+_126889979_126890004	0.132137	GUCAGUU	AK037095|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK045541|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	NM_138594|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK043521|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK137201|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK042976|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK046707|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed
mm9_v1_chr14_+_49791899_49792002	0.129662	GUCAGUU	NM_001081430|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK015640|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC157931|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC158065|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC172029|Naa30|70646|N(alpha)-acetyltransferase 30, NatC catalytic subunit
mm9_v1_chr8_+_23970006_23970020	0.127685	GUCAGUU	AK028058|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK082463|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	NM_001081149|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK039615|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK036885|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK054322|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK132474|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK143408|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3
mm9_v1_chr15_+_80629020_80629144	0.127477	GUCAGUU	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr8_+_125935441_125935463	0.127431	GUCAGUU	AK012528|Tubb3|22152|tubulin, beta 3	AK051298|Tubb3|22152|tubulin, beta 3	AK082942|Tubb3|22152|tubulin, beta 3	AK149014|Tubb3|22152|tubulin, beta 3	BC088749|Tubb3|22152|tubulin, beta 3	BC031357|Tubb3|22152|tubulin, beta 3	NM_023279|Tubb3|22152|tubulin, beta 3
mm9_v1_chr16_-_87496048_87496148	0.126235	GUCAGUU	BC009007|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK168465|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK172867|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK145661|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK145754|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK075711|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK075880|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK159969|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK147038|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	NM_009840|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK010882|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	AK145918|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)	Z37164|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)
mm9_v1_chr2_+_34965011_34965138	0.125312	GUCAGUU	AK041715|Cep110|26920|centrosomal protein 110	NM_012018|Cep110|26920|centrosomal protein 110	AK031338|Cep110|26920|centrosomal protein 110	AK020148|Cep110|26920|centrosomal protein 110	BC038386|Cep110|26920|centrosomal protein 110	BC158010|Cep110|26920|centrosomal protein 110
mm9_v1_chr6_-_57485419_57485488	0.124926	GUCAGUU	BC092238|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	NM_175523|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	AK044610|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)
mm9_v1_chr8_+_109817355_109817761	0.124733	GUCAGUU	AK045123|Nfat5|54446|nuclear factor of activated T-cells 5	AK134022|Nfat5|54446|nuclear factor of activated T-cells 5	NM_018823|Nfat5|54446|nuclear factor of activated T-cells 5	NM_133957|Nfat5|54446|nuclear factor of activated T-cells 5	AK052632|Nfat5|54446|nuclear factor of activated T-cells 5	AF162853|Nfat5|54446|nuclear factor of activated T-cells 5	AK172011|Nfat5|54446|nuclear factor of activated T-cells 5	AF369980|Nfat5|54446|nuclear factor of activated T-cells 5	AF453571|Nfat5|54446|nuclear factor of activated T-cells 5
mm9_v1_chr6_+_137703029_137703138	0.123342	GUCAGUU	AK145820|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK168204|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK012558|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK008033|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK030961|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK075963|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150273|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK169418|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK152462|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK034347|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	BC016218|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK083298|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	NM_172733|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150712|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)
mm9_v1_chr3_-_41546402_41546435	0.123209	GUCAGUU	BC043136|Sclt1|67161|sodium channel and clathrin linker 1	BC060271|Sclt1|67161|sodium channel and clathrin linker 1	AK083894|Sclt1|67161|sodium channel and clathrin linker 1	AK016469|Sclt1|67161|sodium channel and clathrin linker 1	NM_001081411|Sclt1|67161|sodium channel and clathrin linker 1
mm9_v1_chr18_+_5591869_5591894	0.12319	GUCAGUU	AK014114|Zeb1|21417|zinc finger E-box binding homeobox 1	U26259|Zeb1|21417|zinc finger E-box binding homeobox 1	BC139768|Zeb1|21417|zinc finger E-box binding homeobox 1	BC139769|Zeb1|21417|zinc finger E-box binding homeobox 1	D76432|Zeb1|21417|zinc finger E-box binding homeobox 1	NM_011546|Zeb1|21417|zinc finger E-box binding homeobox 1	BC090987|Zeb1|21417|zinc finger E-box binding homeobox 1	AK135371|Zeb1|21417|zinc finger E-box binding homeobox 1
mm9_v1_chr2_-_153067043_153067211	0.123166	GUCAGUU	BC037664|Plagl2|54711|pleiomorphic adenoma gene-like 2	BC078453|Plagl2|54711|pleiomorphic adenoma gene-like 2	NM_018807|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK040626|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK133833|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK141713|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK150243|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK129087|Plagl2|54711|pleiomorphic adenoma gene-like 2
mm9_v1_chr11_+_119464299_119464363	0.122305	GUCAGUU	AK087217|Rptor|74370|regulatory associated protein of MTOR, complex 1	NM_028898|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK029341|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK144082|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK172276|Rptor|74370|regulatory associated protein of MTOR, complex 1
mm9_v1_chr6_-_149050201_149050210	0.12128	GUCAGUU	NM_177192|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr12_-_80190607_80190656	0.117878	GUCAGUU	BC086806|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK030744|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK020902|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK167892|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	NM_029988|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H
mm9_v1_chr15_-_48623520_48623540	0.117208	GUCAGUU	AK140264|Csmd3|239420|CUB and Sushi multiple domains 3	AK163122|Csmd3|239420|CUB and Sushi multiple domains 3	NM_001081391|Csmd3|239420|CUB and Sushi multiple domains 3
mm9_v1_chr17_-_26645403_26645422	0.116478	GUCAGUU	BC006967|Dusp1|19252|dual specificity phosphatase 1	X61940|Dusp1|19252|dual specificity phosphatase 1	AK159658|Dusp1|19252|dual specificity phosphatase 1	AK150433|Dusp1|19252|dual specificity phosphatase 1	AK152183|Dusp1|19252|dual specificity phosphatase 1	AK152905|Dusp1|19252|dual specificity phosphatase 1	AK159251|Dusp1|19252|dual specificity phosphatase 1	AK159363|Dusp1|19252|dual specificity phosphatase 1	AK159567|Dusp1|19252|dual specificity phosphatase 1	AK167602|Dusp1|19252|dual specificity phosphatase 1	AK168627|Dusp1|19252|dual specificity phosphatase 1	NM_013642|Dusp1|19252|dual specificity phosphatase 1	AK145903|Dusp1|19252|dual specificity phosphatase 1	AK152324|Dusp1|19252|dual specificity phosphatase 1
mm9_v1_chr1_+_132613903_132614127	0.116056	GUCAGUU	AK036938|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	AK036991|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	NM_178691|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	BC139034|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	AK044678|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	BC099948|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	AK053730|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm9_v1_chr1_+_64579358_64579513	0.116056	GUCAGUU	NM_001037726|Creb1|12912|cAMP responsive element binding protein 1	NM_009952|Creb1|12912|cAMP responsive element binding protein 1	NM_133828|Creb1|12912|cAMP responsive element binding protein 1	AK079223|Creb1|12912|cAMP responsive element binding protein 1	X92497|Creb1|12912|cAMP responsive element binding protein 1	AK042595|Creb1|12912|cAMP responsive element binding protein 1	BC021649|Creb1|12912|cAMP responsive element binding protein 1	M95106|Creb1|12912|cAMP responsive element binding protein 1	AF448507|Creb1|12912|cAMP responsive element binding protein 1
mm9_v1_chr9_+_111174321_111174442	0.115973	GUCAGUU	BC018474|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	NM_175266|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK032284|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK043518|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK030084|Epm2aip1|77781|EPM2A (laforin) interacting protein 1
mm9_v1_chr2_+_4480799_4480871	0.114473	GUCAGUU	AK077327|Frmd4a|209630|FERM domain containing 4A	NM_001177844|Frmd4a|209630|FERM domain containing 4A	AK148414|Frmd4a|209630|FERM domain containing 4A	AK029073|Frmd4a|209630|FERM domain containing 4A	AK171532|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr5_-_90795190_90795275	0.114282	GUCAGUU	AK031350|Ankrd17|81702|ankyrin repeat domain 17	NM_030886|Ankrd17|81702|ankyrin repeat domain 17	NM_198010|Ankrd17|81702|ankyrin repeat domain 17
mm9_v1_chr2_+_13995715_13995918	0.114168	GUCAGUU	AK144987|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK169170|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	BC044666|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	NM_011484|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK157767|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK162431|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK163720|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	BC055326|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK163922|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK035924|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK147832|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	U43900|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK179759|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
mm9_v1_chr17_-_91492065_91492142	0.113082	GUCAGUU	BC079893|Nrxn1|18189|neurexin I	AK005349|Nrxn1|18189|neurexin I	AK139280|Nrxn1|18189|neurexin I	AK163484|Nrxn1|18189|neurexin I	AK037724|Nrxn1|18189|neurexin I	AB093249|Nrxn1|18189|neurexin I	NM_020252|Nrxn1|18189|neurexin I	NM_177284|Nrxn1|18189|neurexin I	AK137407|Nrxn1|18189|neurexin I
mm9_v1_chr15_-_84818368_84818512	0.11268	GUCAGUU	AK149782|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene	NM_001033273|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene	AK170532|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene
mm9_v1_chr2_-_25110892_25110940	0.112135	GUCAGUU	BC049789|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK163207|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK143124|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK169885|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK019617|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	NM_001082476|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1
mm9_v1_chr1_-_84835871_84836168	0.111957	GUCAGUU	AK158807|Trip12|14897|thyroid hormone receptor interactor 12	NM_133975|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr12_+_81745188_81745226	0.111655	GUCAGUU	NM_026244|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK090062|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK080462|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	BC072655|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK008025|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr6_-_30643681_30643723	0.110489	GUCAGUU	BC031892|Tsga14|83922|testis specific gene A14	NM_031998|Tsga14|83922|testis specific gene A14	AK161461|Tsga14|83922|testis specific gene A14	AK166974|Tsga14|83922|testis specific gene A14	AK019270|Tsga14|83922|testis specific gene A14	AK132495|Tsga14|83922|testis specific gene A14	AJ278891|Tsga14|83922|testis specific gene A14	AK006059|Tsga14|83922|testis specific gene A14	AK170213|Tsga14|83922|testis specific gene A14
mm9_v1_chr6_+_90319485_90319663	0.10969	GUCAGUU	AK081005|Zxdc|80292|ZXD family zinc finger C	NM_030260|Zxdc|80292|ZXD family zinc finger C	NM_173002|Zxdc|80292|ZXD family zinc finger C	BC003332|Zxdc|80292|ZXD family zinc finger C	AK042190|Zxdc|80292|ZXD family zinc finger C	AK044529|Zxdc|80292|ZXD family zinc finger C	AK030287|Zxdc|80292|ZXD family zinc finger C	AK047538|Zxdc|80292|ZXD family zinc finger C	AK042392|Zxdc|80292|ZXD family zinc finger C	AK080307|Zxdc|80292|ZXD family zinc finger C	AK044429|Zxdc|80292|ZXD family zinc finger C	AK044948|Zxdc|80292|ZXD family zinc finger C	AK169517|Zxdc|80292|ZXD family zinc finger C	AK047079|Zxdc|80292|ZXD family zinc finger C	AK137347|Zxdc|80292|ZXD family zinc finger C	AK141613|Zxdc|80292|ZXD family zinc finger C
mm9_v1_chr5_-_31482504_31482530	0.109647	GUCAGUU	BC043100|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK083585|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	NM_027901|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta
mm9_v1_chr6_-_145198693_145198778	0.109534	GUCAGUU	BC119495|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC004642|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC010202|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	AK155064|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	AK164065|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	NM_021284|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
mm9_v1_chr2_-_63936044_63936094	0.109341	GUCAGUU	AF263913|Fign|60344|fidgetin	AK163474|Fign|60344|fidgetin	AK164536|Fign|60344|fidgetin	NM_021716|Fign|60344|fidgetin	AK143787|Fign|60344|fidgetin	BC059266|Fign|60344|fidgetin
mm9_v1_chr9_+_3404047_3404117	0.109329	GUCAGUU	BC125483|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC125485|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK083386|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK045423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	NM_027545|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK014327|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK031423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC100536|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC051218|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC043480|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)
mm9_v1_chr6_+_54545104_54545338	0.109254	GUCAGUU	AK078040|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001164361|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK170592|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chrX_-_20527674_20527737	0.108594	GUCAGUU	BC054474|Elk1|13712|ELK1, member of ETS oncogene family	AK132354|Elk1|13712|ELK1, member of ETS oncogene family	NM_007922|Elk1|13712|ELK1, member of ETS oncogene family	AK082260|Elk1|13712|ELK1, member of ETS oncogene family
mm9_v1_chr3_+_58380577_58380636	0.108053	GUCAGUU	NM_001040396|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK017528|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK032838|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK047958|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC132453|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC138424|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK013022|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	BC019970|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene	AK146778|2810407C02Rik|69227|RIKEN cDNA 2810407C02 gene
mm9_v1_chr13_-_54666552_54666754	0.107537	GUCAGUU	AK217762|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK173126|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	BC039775|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK014792|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK028697|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK016176|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK167616|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	BC054417|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	BC043040|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK004845|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK159945|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK145025|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK169399|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	BC033445|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	NM_133797|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene
mm9_v1_chr5_+_28643698_28643741	0.107033	GUCAGUU	NM_028234|Rbm33|381626|RNA binding motif protein 33	AK014289|Rbm33|381626|RNA binding motif protein 33
mm9_v1_chr4_+_9196439_9196508	0.106452	GUCAGUU	AK034888|Clvs1|74438|clavesin 1	AK083985|Clvs1|74438|clavesin 1	AK047462|Clvs1|74438|clavesin 1	AK083810|Clvs1|74438|clavesin 1	NM_028940|Clvs1|74438|clavesin 1	AK084350|Clvs1|74438|clavesin 1	AK043072|Clvs1|74438|clavesin 1	AK032549|Clvs1|74438|clavesin 1	BC062923|Clvs1|74438|clavesin 1
mm9_v1_chr5_+_73305509_73305751	0.105964	GUCAGUU	NM_001113423|Slain2|75991|SLAIN motif family, member 2	NM_153567|Slain2|75991|SLAIN motif family, member 2	AK146432|Slain2|75991|SLAIN motif family, member 2	AK129365|Slain2|75991|SLAIN motif family, member 2	BC010836|Slain2|75991|SLAIN motif family, member 2	AK033137|Slain2|75991|SLAIN motif family, member 2	AK039970|Slain2|75991|SLAIN motif family, member 2	BC076573|Slain2|75991|SLAIN motif family, member 2
mm9_v1_chr13_+_81022644_81022695	0.105833	GUCAGUU	AK088288|Arrdc3|105171|arrestin domain containing 3	AK084951|Arrdc3|105171|arrestin domain containing 3	BC054844|Arrdc3|105171|arrestin domain containing 3	NM_001042591|Arrdc3|105171|arrestin domain containing 3	BC044762|Arrdc3|105171|arrestin domain containing 3	BC098474|Arrdc3|105171|arrestin domain containing 3	AK122499|Arrdc3|105171|arrestin domain containing 3
mm9_v1_chr4_+_85699818_85699939	0.105499	GUCAGUU	NM_029967|Adamtsl1|77739|ADAMTS-like 1	AK020115|Adamtsl1|77739|ADAMTS-like 1	BC062814|Adamtsl1|77739|ADAMTS-like 1	AK045085|Adamtsl1|77739|ADAMTS-like 1	BC139339|Adamtsl1|77739|ADAMTS-like 1	BC139367|Adamtsl1|77739|ADAMTS-like 1
mm9_v1_chr1_-_171677653_171677778	0.105343	GUCAGUU	AB004315|Rgs4|19736|regulator of G-protein signaling 4	BC003882|Rgs4|19736|regulator of G-protein signaling 4	BC055293|Rgs4|19736|regulator of G-protein signaling 4	AK030536|Rgs4|19736|regulator of G-protein signaling 4	AK039134|Rgs4|19736|regulator of G-protein signaling 4	DQ346659|Rgs4|19736|regulator of G-protein signaling 4	DQ346660|Rgs4|19736|regulator of G-protein signaling 4	DQ346661|Rgs4|19736|regulator of G-protein signaling 4	NM_009062|Rgs4|19736|regulator of G-protein signaling 4
mm9_v1_chr17_+_47748530_47748580	0.10406	GUCAGUU	AK041624|Med20|56771|mediator complex subunit 20	AK019130|Med20|56771|mediator complex subunit 20	AK043396|Med20|56771|mediator complex subunit 20	AK146345|Med20|56771|mediator complex subunit 20	NM_020048|Med20|56771|mediator complex subunit 20	AK031504|Med20|56771|mediator complex subunit 20	BC060122|Med20|56771|mediator complex subunit 20	AK141369|Med20|56771|mediator complex subunit 20	AJ245617|Med20|56771|mediator complex subunit 20
mm9_v1_chr11_+_49660238_49660298	0.103782	GUCAGUU	NM_001163671|Mapk9|26420|mitogen-activated protein kinase 9	NM_001163672|Mapk9|26420|mitogen-activated protein kinase 9	NM_016961|Mapk9|26420|mitogen-activated protein kinase 9	NM_207692|Mapk9|26420|mitogen-activated protein kinase 9	AK031959|Mapk9|26420|mitogen-activated protein kinase 9	AK090057|Mapk9|26420|mitogen-activated protein kinase 9	AK145083|Mapk9|26420|mitogen-activated protein kinase 9	BC028341|Mapk9|26420|mitogen-activated protein kinase 9
mm9_v1_chr4_+_107474842_107475017	0.103454	GUCAGUU	NM_001080926|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D85463|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC127061|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	AJ312058|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm9_v1_chr18_-_6135924_6136095	0.102234	GUCAGUU	AK031648|Arhgap12|75415|Rho GTPase activating protein 12	AK012717|Arhgap12|75415|Rho GTPase activating protein 12	AK077063|Arhgap12|75415|Rho GTPase activating protein 12	NM_001039692|Arhgap12|75415|Rho GTPase activating protein 12	NM_029277|Arhgap12|75415|Rho GTPase activating protein 12
mm9_v1_chr13_+_9093121_9093197	0.102097	GUCAGUU	AK080953|Larp4b|217980|La ribonucleoprotein domain family, member 4B	AK160759|Larp4b|217980|La ribonucleoprotein domain family, member 4B	NM_172585|Larp4b|217980|La ribonucleoprotein domain family, member 4B	AK042491|Larp4b|217980|La ribonucleoprotein domain family, member 4B	AK172916|Larp4b|217980|La ribonucleoprotein domain family, member 4B	BC059218|Larp4b|217980|La ribonucleoprotein domain family, member 4B	BC086626|Larp4b|217980|La ribonucleoprotein domain family, member 4B
mm9_v1_chr8_+_124474432_124474469	0.101693	GUCAGUU	NM_001110100|Banp|53325|BTG3 associated nuclear protein	NM_016812|Banp|53325|BTG3 associated nuclear protein	BC062641|Banp|53325|BTG3 associated nuclear protein
mm9_v1_chr3_-_142544883_142544984	0.0999711	GUCAGUU	AK046248|Pkn2|109333|protein kinase N2	AK171092|Pkn2|109333|protein kinase N2	BC052073|Pkn2|109333|protein kinase N2	AK077910|Pkn2|109333|protein kinase N2	AK028469|Pkn2|109333|protein kinase N2	AK049713|Pkn2|109333|protein kinase N2	AK133298|Pkn2|109333|protein kinase N2	NM_178654|Pkn2|109333|protein kinase N2
mm9_v1_chr5_+_110564841_110564902	0.0994266	GUCAGUU	NM_172717|Chfr|231600|checkpoint with forkhead and ring finger domains	AK039281|Chfr|231600|checkpoint with forkhead and ring finger domains	AK133154|Chfr|231600|checkpoint with forkhead and ring finger domains	AK154038|Chfr|231600|checkpoint with forkhead and ring finger domains	AK048930|Chfr|231600|checkpoint with forkhead and ring finger domains	AK147892|Chfr|231600|checkpoint with forkhead and ring finger domains	AK077629|Chfr|231600|checkpoint with forkhead and ring finger domains	AK148436|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155295|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155525|Chfr|231600|checkpoint with forkhead and ring finger domains	AK052473|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169193|Chfr|231600|checkpoint with forkhead and ring finger domains	BC049792|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169182|Chfr|231600|checkpoint with forkhead and ring finger domains
mm9_v1_chr6_+_47404312_47404467	0.0987771	GUCAGUU	BC029260|Cul1|26965|cullin 1	NM_012042|Cul1|26965|cullin 1	AK147004|Cul1|26965|cullin 1	AK165978|Cul1|26965|cullin 1	AK040053|Cul1|26965|cullin 1	AF176910|Cul1|26965|cullin 1	AF136441|Cul1|26965|cullin 1
mm9_v1_chr15_-_64214427_64214520	0.0987207	GUCAGUU	BC094581|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1	NM_010026|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1
mm9_v1_chr16_-_31201251_31201348	0.0983909	GUCAGUU	AK032916|Acap2|78618|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	AK129041|Acap2|78618|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	AK044812|Acap2|78618|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	AK020591|Acap2|78618|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	NM_030138|Acap2|78618|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
mm9_v1_chr6_+_71657791_71657963	0.0981723	GUCAGUU	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr11_+_109224104_109224273	0.0970122	GUCAGUU	NM_010303|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK011851|Gna13|14674|guanine nucleotide binding protein, alpha 13	M63660|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK149766|Gna13|14674|guanine nucleotide binding protein, alpha 13	BC057665|Gna13|14674|guanine nucleotide binding protein, alpha 13
mm9_v1_chr2_+_32426348_32426407	0.09635	GUCAGUU	BC008256|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	NM_010073|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	AK002468|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	AK086634|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	AK004241|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2	AB013360|Dpm2|13481|dolichol-phosphate (beta-D) mannosyltransferase 2
mm9_v1_chrX_+_117040804_117040804	0.0954376	GUCAGUU	AK050551|Pabpc5|93728|poly(A) binding protein, cytoplasmic 5	NM_053114|Pabpc5|93728|poly(A) binding protein, cytoplasmic 5
mm9_v1_chr19_+_10257363_10257524	0.0953913	GUCAGUU	NM_146094|Fads1|76267|fatty acid desaturase 1	BC026831|Fads1|76267|fatty acid desaturase 1	AK154367|Fads1|76267|fatty acid desaturase 1	BC022139|Fads1|76267|fatty acid desaturase 1	BC026848|Fads1|76267|fatty acid desaturase 1	AB072976|Fads1|76267|fatty acid desaturase 1	AK080706|Fads1|76267|fatty acid desaturase 1	AF061504|Fads1|76267|fatty acid desaturase 1	AK083959|Fads1|76267|fatty acid desaturase 1	BC063053|Fads1|76267|fatty acid desaturase 1
mm9_v1_chr18_-_38443954_38444055	0.095309	GUCAGUU	BC127076|Pcdh12|53601|protocadherin 12	Y08715|Pcdh12|53601|protocadherin 12	AK048100|Pcdh12|53601|protocadherin 12	NM_017378|Pcdh12|53601|protocadherin 12	AK028374|Pcdh12|53601|protocadherin 12
mm9_v1_chr2_+_76513326_76513402	0.095008	GUCAGUU	BC031110|Plekha3|83435|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3	NM_031256|Plekha3|83435|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm9_v1_chr1_+_145586675_145586780	0.0947599	GUCAGUU	NM_001038592|Glrx2|69367|glutaredoxin 2 (thioltransferase)	NM_023505|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC065387|Glrx2|69367|glutaredoxin 2 (thioltransferase)	AF380337|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC132031|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC132033|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC145303|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC145304|Glrx2|69367|glutaredoxin 2 (thioltransferase)	AF276918|Glrx2|69367|glutaredoxin 2 (thioltransferase)
mm9_v1_chr4_+_148892231_148892432	0.0938138	GUCAGUU	AK036181|Ctnnbip1|67087|catenin beta interacting protein 1	NM_023465|Ctnnbip1|67087|catenin beta interacting protein 1	AK048258|Ctnnbip1|67087|catenin beta interacting protein 1	BC038253|Ctnnbip1|67087|catenin beta interacting protein 1	BC018436|Ctnnbip1|67087|catenin beta interacting protein 1	AB021261|Ctnnbip1|67087|catenin beta interacting protein 1
mm9_v1_chr11_+_55283201_55283255	0.0933444	GUCAGUU	AK137344|G3bp1|27041|Ras-GTPase-activating protein SH3-domain binding protein 1	BC021156|G3bp1|27041|Ras-GTPase-activating protein SH3-domain binding protein 1	AB001927|G3bp1|27041|Ras-GTPase-activating protein SH3-domain binding protein 1	NM_013716|G3bp1|27041|Ras-GTPase-activating protein SH3-domain binding protein 1
mm9_v1_chrX_+_100551808_100551914	0.0918659	GUCAGUU	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr3_-_57379600_57379797	0.0917673	GUCAGUU	AK213529|Wwtr1|97064|WW domain containing transcription regulator 1	BC004640|Wwtr1|97064|WW domain containing transcription regulator 1	AK142720|Wwtr1|97064|WW domain containing transcription regulator 1	AK009983|Wwtr1|97064|WW domain containing transcription regulator 1	AJ299430|Wwtr1|97064|WW domain containing transcription regulator 1	BC014727|Wwtr1|97064|WW domain containing transcription regulator 1	AK011504|Wwtr1|97064|WW domain containing transcription regulator 1	NM_133784|Wwtr1|97064|WW domain containing transcription regulator 1
mm9_v1_chr6_-_98978185_98978383	0.091703	GUCAGUU	AK077062|Foxp1|108655|forkhead box P1	AK144920|Foxp1|108655|forkhead box P1	NM_001197322|Foxp1|108655|forkhead box P1
mm9_v1_chr4_+_21858472_21858503	0.0912801	GUCAGUU	AK144924|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	NM_175234|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	AK081616|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	AK082464|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	AK018081|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene
mm9_v1_chr11_-_86497242_86497360	0.0907537	GUCAGUU	AX775963|Tmem49|75909|transmembrane protein 49	AK019443|Tmem49|75909|transmembrane protein 49	AK049559|Tmem49|75909|transmembrane protein 49	BC004013|Tmem49|75909|transmembrane protein 49	AK077443|Tmem49|75909|transmembrane protein 49	AK043091|Tmem49|75909|transmembrane protein 49	NM_029478|Tmem49|75909|transmembrane protein 49	AB047550|Tmem49|75909|transmembrane protein 49	AK167173|Tmem49|75909|transmembrane protein 49	AK167202|Tmem49|75909|transmembrane protein 49	AK016312|Tmem49|75909|transmembrane protein 49	AK159468|Tmem49|75909|transmembrane protein 49
mm9_v1_chr2_-_7317513_7317626	0.0902877	GUCAGUU	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr6_+_53989925_53989975	0.0894073	GUCAGUU	AK030336|Chn2|69993|chimerin (chimaerin) 2	NM_001163640|Chn2|69993|chimerin (chimaerin) 2
mm9_v1_chr11_+_72420705_72421072	0.0885362	GUCAGUU	NM_025985|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	BC065083|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK083029|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK012539|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK013902|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK167472|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK197264|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)
mm9_v1_chr3_+_130813214_130813388	0.0879315	GUCAGUU	BC057543|Lef1|16842|lymphoid enhancer binding factor 1	AK131979|Lef1|16842|lymphoid enhancer binding factor 1	AK158769|Lef1|16842|lymphoid enhancer binding factor 1	NM_010703|Lef1|16842|lymphoid enhancer binding factor 1	X58636|Lef1|16842|lymphoid enhancer binding factor 1
mm9_v1_chr19_-_40588297_40588344	0.0864159	GUCAGUU	NM_009166|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr13_-_101420788_101421037	0.0863263	GUCAGUU	AJ011923|Rad17|19356|RAD17 homolog (S. pombe)	AF085737|Rad17|19356|RAD17 homolog (S. pombe)	AK167358|Rad17|19356|RAD17 homolog (S. pombe)	AK134277|Rad17|19356|RAD17 homolog (S. pombe)	AK162016|Rad17|19356|RAD17 homolog (S. pombe)	BC066855|Rad17|19356|RAD17 homolog (S. pombe)	BC023939|Rad17|19356|RAD17 homolog (S. pombe)	NM_001044371|Rad17|19356|RAD17 homolog (S. pombe)	NM_011233|Rad17|19356|RAD17 homolog (S. pombe)
mm9_v1_chr11_-_98010872_98010958	0.0861218	GUCAGUU	AK220232|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK161566|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK144786|Fbxl20|72194|F-box and leucine-rich repeat protein 20	NM_028149|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK012109|Fbxl20|72194|F-box and leucine-rich repeat protein 20
mm9_v1_chr2_+_181231870_181232009	0.0858157	GUCAGUU	AK171825|Tpd52l2|66314|tumor protein D52-like 2	AK147885|Tpd52l2|66314|tumor protein D52-like 2	AK161092|Tpd52l2|66314|tumor protein D52-like 2	AK013188|Tpd52l2|66314|tumor protein D52-like 2	AK051268|Tpd52l2|66314|tumor protein D52-like 2	AK160727|Tpd52l2|66314|tumor protein D52-like 2	AK013085|Tpd52l2|66314|tumor protein D52-like 2	AK155987|Tpd52l2|66314|tumor protein D52-like 2	AK159925|Tpd52l2|66314|tumor protein D52-like 2	BC006886|Tpd52l2|66314|tumor protein D52-like 2	NM_025482|Tpd52l2|66314|tumor protein D52-like 2
mm9_v1_chr4_-_126106749_126106807	0.0857309	GUCAGUU	AK035042|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK083652|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK171118|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK154436|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	NM_153402|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3
mm9_v1_chr16_-_18235102_18235235	0.085042	GUCAGUU	AY668947|Zdhhc8|27801|zinc finger, DHHC domain containing 8	AY894892|Zdhhc8|27801|zinc finger, DHHC domain containing 8	NM_172151|Zdhhc8|27801|zinc finger, DHHC domain containing 8
mm9_v1_chr2_+_155207581_155207616	0.0845336	GUCAGUU	AJ297793|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK146589|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	BC043086|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	NM_178111|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK149495|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr9_+_56785271_56785306	0.0840432	GUCAGUU	AK004456|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC009145|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)	NM_133976|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr15_+_79501284_79501317	0.0832145	GUCAGUU	AK008133|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK009868|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	NM_172609|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150787|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK013471|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK049442|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150360|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK152843|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK167803|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	BC056920|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)
mm9_v1_chr11_+_87861165_87861225	0.0828317	GUCAGUU	AK150535|Srsf1|110809|serine/arginine-rich splicing factor 1	NM_001078167|Srsf1|110809|serine/arginine-rich splicing factor 1	NM_173374|Srsf1|110809|serine/arginine-rich splicing factor 1	AK053674|Srsf1|110809|serine/arginine-rich splicing factor 1	AK018176|Srsf1|110809|serine/arginine-rich splicing factor 1	BC058627|Srsf1|110809|serine/arginine-rich splicing factor 1	AK078715|Srsf1|110809|serine/arginine-rich splicing factor 1	AK169203|Srsf1|110809|serine/arginine-rich splicing factor 1	AK169623|Srsf1|110809|serine/arginine-rich splicing factor 1	AK190745|Srsf1|110809|serine/arginine-rich splicing factor 1
mm9_v1_chrX_-_13423666_13423727	0.0827979	GUCAGUU	NM_009806|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17137|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17138|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm9_v1_chr2_+_90585526_90585673	0.0825058	GUCAGUU	NM_018828|Fnbp4|55935|formin binding protein 4	U40750|Fnbp4|55935|formin binding protein 4
mm9_v1_chrX_+_162676870_162676901	0.0819902	GUCAGUU	NM_001177961|Gpm6b|14758|glycoprotein m6b	NM_001177962|Gpm6b|14758|glycoprotein m6b	NM_023122|Gpm6b|14758|glycoprotein m6b	AK132778|Gpm6b|14758|glycoprotein m6b
mm9_v1_chr12_+_25659777_25659836	0.0818181	GUCAGUU	AK021172|Kidins220|77480|kinase D-interacting substrate 220	NM_001081378|Kidins220|77480|kinase D-interacting substrate 220	BC157898|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr8_-_89269853_89269958	0.0812785	GUCAGUU	BC046317|Siah1a|20437|seven in absentia 1A	NM_009172|Siah1a|20437|seven in absentia 1A
mm9_v1_chr2_-_151567023_151567053	0.080754	GUCAGUU	AK031363|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	AK083431|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	NM_212446|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1	AK053924|Psmf1|228769|proteasome (prosome, macropain) inhibitor subunit 1
mm9_v1_chr11_-_53113895_53113995	0.080102	GUCAGUU	AK155305|Hspa4|15525|heat shock protein 4	AK053601|Hspa4|15525|heat shock protein 4	AK054010|Hspa4|15525|heat shock protein 4	AK133772|Hspa4|15525|heat shock protein 4	AK220167|Hspa4|15525|heat shock protein 4	AK143543|Hspa4|15525|heat shock protein 4	AK171940|Hspa4|15525|heat shock protein 4	AK166102|Hspa4|15525|heat shock protein 4	NM_008300|Hspa4|15525|heat shock protein 4
mm9_v1_chr11_-_54674080_54674223	0.078458	GUCAGUU	NM_029327|Lyrm7|75530|LYR motif containing 7	BC139403|Lyrm7|75530|LYR motif containing 7	BC139406|Lyrm7|75530|LYR motif containing 7
mm9_v1_chr11_+_53164267_53164268	0.0778908	GUCAGUU	NM_033565|Aff4|93736|AF4/FMR2 family, member 4
mm9_v1_chr16_+_13256573_13256634	0.0775811	GUCAGUU	NM_001122667|Mkl2|239719|MKL/myocardin-like 2	X66901|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr7_-_112959591_112959616	0.0770865	GUCAGUU	NM_025301|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr10_+_82323085_82323203	0.0770377	GUCAGUU	NM_001042514|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr12_+_56181474_56181576	0.0769055	GUCAGUU	NM_011899|Srp54a|24067|signal recognition particle 54A	X16319|Srp54b|665155|signal recognition particle 54B	AK011928|Srp54a|24067|signal recognition particle 54A	BC019683|Srp54a|24067|signal recognition particle 54A
mm9_v1_chr13_+_49748707_49748855	0.0768684	GUCAGUU	AK147172|Nol8|70930|nucleolar protein 8	NM_001081350|Nol8|70930|nucleolar protein 8	BC125575|Nol8|70930|nucleolar protein 8	BC125579|Nol8|70930|nucleolar protein 8	AK029961|Nol8|70930|nucleolar protein 8	BC049166|Nol8|70930|nucleolar protein 8
mm9_v1_chr10_+_69903653_69903701	0.0753249	GUCAGUU	AK041147|Fam13c|71721|family with sequence similarity 13, member C	NM_001143776|Fam13c|71721|family with sequence similarity 13, member C	NM_024244|Fam13c|71721|family with sequence similarity 13, member C	AK082202|Fam13c|71721|family with sequence similarity 13, member C	AK004797|Fam13c|71721|family with sequence similarity 13, member C	BC129839|Fam13c|71721|family with sequence similarity 13, member C	BC129840|Fam13c|71721|family with sequence similarity 13, member C
mm9_v1_chr1_+_108068405_108068445	0.0752727	GUCAGUU	NM_133821|Phlpp1|98432|PH domain and leucine rich repeat protein phosphatase 1
mm9_v1_chr13_-_100286521_100286556	0.074124	GUCAGUU	NM_008634|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr3_-_113332817_113333068	0.0728936	GUCAGUU	AK173272|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK179549|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK187884|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK084372|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK013288|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161974|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK163729|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK134241|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	BC043695|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161063|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_001038696|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_026043|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3
mm9_v1_chr5_-_128097687_128097794	0.071739	GUCAGUU	BC016233|Slc15a4|100561|solute carrier family 15, member 4	NM_133895|Slc15a4|100561|solute carrier family 15, member 4	AY050630|Slc15a4|100561|solute carrier family 15, member 4	AK048529|Slc15a4|100561|solute carrier family 15, member 4	AK154238|Slc15a4|100561|solute carrier family 15, member 4
mm9_v1_chr2_+_35413977_35414092	0.070597	GUCAGUU	NM_001114125|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	DQ473307|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr1_+_78654399_78654472	0.0704546	GUCAGUU	AK161708|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_001001981|Utp14b|195434|UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)	NM_001033606|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_001136222|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_028817|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK012088|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK160839|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK166723|Acsl3|74205|acyl-CoA synthetase long-chain family member 3
mm9_v1_chr8_+_106694341_106694482	0.0692543	GUCAGUU	BC030426|Bean1|65115|brain expressed, associated with Nedd4, 1	AK134633|Bean1|65115|brain expressed, associated with Nedd4, 1	NM_001141922|Bean1|65115|brain expressed, associated with Nedd4, 1	NM_001141924|Bean1|65115|brain expressed, associated with Nedd4, 1	NM_001141925|Bean1|65115|brain expressed, associated with Nedd4, 1	BC138184|Bean1|65115|brain expressed, associated with Nedd4, 1
mm9_v1_chr10_+_7400978_7401034	0.0691489	GUCAGUU	AK038612|Lats1|16798|large tumor suppressor	NM_010690|Lats1|16798|large tumor suppressor	BC158123|Lats1|16798|large tumor suppressor
mm9_v1_chr6_+_86354212_86354404	0.069091	GUCAGUU	NM_001164078|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_001164079|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_011585|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK144222|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK088486|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC023813|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC046812|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC027826|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	U55862|Tia1|21841|cytotoxic granule-associated RNA binding protein 1
mm9_v1_chr6_-_77929660_77929669	0.0690185	GUCAGUU	NM_001109764|Ctnna2|12386|catenin (cadherin associated protein), alpha 2	NM_009819|Ctnna2|12386|catenin (cadherin associated protein), alpha 2	NM_145732|Ctnna2|12386|catenin (cadherin associated protein), alpha 2
mm9_v1_chr12_-_4038848_4038914	0.0678878	GUCAGUU	BC147643|Efr3b|668212|EFR3 homolog B (S. cerevisiae)	BC157968|Efr3b|668212|EFR3 homolog B (S. cerevisiae)	NM_001082483|Efr3b|668212|EFR3 homolog B (S. cerevisiae)
mm9_v1_chr4_+_87740516_87740554	0.0662045	GUCAGUU	NM_001081184|BC057079|230393|cDNA sequence BC057079	AK164030|BC057079|230393|cDNA sequence BC057079
mm9_v1_chr2_+_4638844_4638934	0.0660726	GUCAGUU	AK053896|Bend7|209645|BEN domain containing 7	NM_001190400|Bend7|209645|BEN domain containing 7	NM_178663|Bend7|209645|BEN domain containing 7	AK042822|Bend7|209645|BEN domain containing 7
mm9_v1_chr6_-_92133945_92134035	0.0627395	GUCAGUU	AK131114|Mrps25|64658|mitochondrial ribosomal protein S25	AK013196|Mrps25|64658|mitochondrial ribosomal protein S25	AK004037|Mrps25|64658|mitochondrial ribosomal protein S25	BC022953|Mrps25|64658|mitochondrial ribosomal protein S25	NM_025578|Mrps25|64658|mitochondrial ribosomal protein S25
mm9_v1_chr11_+_93857338_93857584	0.0624447	GUCAGUU	AK161623|Spag9|70834|sperm associated antigen 9	NM_027569|Spag9|70834|sperm associated antigen 9	AF327451|Spag9|70834|sperm associated antigen 9	AB047782|Spag9|70834|sperm associated antigen 9	FJ042496|Spag9|70834|sperm associated antigen 9	AK030165|Spag9|70834|sperm associated antigen 9
mm9_v1_chr7_+_63023547_63023630	0.0612529	GUCAGUU	AK139362|Siglech|233274|sialic acid binding Ig-like lectin H	NM_178706|Siglech|233274|sialic acid binding Ig-like lectin H	AK080658|Siglech|233274|sialic acid binding Ig-like lectin H	AK032377|Siglech|233274|sialic acid binding Ig-like lectin H	DQ208935|Siglech|233274|sialic acid binding Ig-like lectin H	BC120501|Siglech|233274|sialic acid binding Ig-like lectin H	BC144741|Siglech|233274|sialic acid binding Ig-like lectin H	BC144742|Siglech|233274|sialic acid binding Ig-like lectin H	BC144743|Siglech|233274|sialic acid binding Ig-like lectin H	BC098229|Siglech|233274|sialic acid binding Ig-like lectin H	AK045719|Siglech|233274|sialic acid binding Ig-like lectin H	AK047813|Siglech|233274|sialic acid binding Ig-like lectin H	DQ157764|Siglech|233274|sialic acid binding Ig-like lectin H
mm9_v1_chr13_-_18085124_18085192	0.060531	GUCAGUU	AK019184|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK076034|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	BC083111|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK011805|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK011852|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	BC020123|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK030455|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK151981|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	BC037189|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	BC048453|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK005425|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	AK011774|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene	NM_025904|1600012F09Rik|67008|RIKEN cDNA 1600012F09 gene
mm9_v1_chr12_-_99972803_99972854	0.0600827	GUCAGUU	D37801|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK013777|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK030456|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	NM_011877|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21
mm9_v1_chr9_+_113650560_113650629	0.0598601	GUCAGUU	AJ276961|Clasp2|76499|CLIP associating protein 2	NM_001114347|Clasp2|76499|CLIP associating protein 2	AK034560|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr17_+_26852581_26852657	0.0592065	GUCAGUU	AK030092|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	NM_029870|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK044760|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK020796|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132423|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132454|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr18_-_70301202_70301243	0.0588084	GUCAGUU	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr6_-_85911593_85911675	0.0586689	GUCAGUU	BC067028|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK040232|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK079991|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK081629|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	AK088941|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	NM_028099|Dusp11|72102|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
mm9_v1_chr2_+_3035629_3035684	0.0585609	GUCAGUU	NM_001081161|Fam171a1|269233|family with sequence similarity 171, member A1	AK032237|Fam171a1|269233|family with sequence similarity 171, member A1
mm9_v1_chr7_-_74790088_74790121	0.0584962	GUCAGUU	AK004904|Lrrc28|67867|leucine rich repeat containing 28	AK008713|Lrrc28|67867|leucine rich repeat containing 28	AK159417|Lrrc28|67867|leucine rich repeat containing 28	AK050154|Lrrc28|67867|leucine rich repeat containing 28	AK077270|Lrrc28|67867|leucine rich repeat containing 28	NM_027413|Lrrc28|67867|leucine rich repeat containing 28	NM_175124|Lrrc28|67867|leucine rich repeat containing 28
mm9_v1_chr17_-_48061577_48061752	0.0581785	GUCAGUU	BC057110|Foxp4|74123|forkhead box P4	NM_001110824|Foxp4|74123|forkhead box P4	NM_001110825|Foxp4|74123|forkhead box P4	NM_028767|Foxp4|74123|forkhead box P4
mm9_v1_chr4_-_59796621_59796743	0.0579072	GUCAGUU	BC116204|1110054O05Rik|66209|RIKEN cDNA 1110054O05 gene	BC116205|1110054O05Rik|66209|RIKEN cDNA 1110054O05 gene	AK012023|1110054O05Rik|66209|RIKEN cDNA 1110054O05 gene	AK004256|1110054O05Rik|66209|RIKEN cDNA 1110054O05 gene	AK005245|1110054O05Rik|66209|RIKEN cDNA 1110054O05 gene	AK169537|1110054O05Rik|66209|RIKEN cDNA 1110054O05 gene	AK159116|1110054O05Rik|66209|RIKEN cDNA 1110054O05 gene	AK049428|1110054O05Rik|66209|RIKEN cDNA 1110054O05 gene	NM_001013577|1110054O05Rik|66209|RIKEN cDNA 1110054O05 gene
mm9_v1_chr11_+_77306825_77306918	0.056499	GUCAGUU	BC079870|Git1|216963|G protein-coupled receptor kinase-interactor 1	NM_001004144|Git1|216963|G protein-coupled receptor kinase-interactor 1
mm9_v1_chr18_+_10325174_10325177	0.0557015	GUCAGUU	AK142556|Greb1l|381157|growth regulation by estrogen in breast cancer-like	NM_001083628|Greb1l|381157|growth regulation by estrogen in breast cancer-like
mm9_v1_chr12_-_31596396_31596507	0.05475	GUCAGUU	Y17343|Acp1|11431|acid phosphatase 1, soluble	Y17345|Acp1|11431|acid phosphatase 1, soluble	BC093527|Acp1|11431|acid phosphatase 1, soluble	BC111893|Acp1|11431|acid phosphatase 1, soluble	BC112413|Acp1|11431|acid phosphatase 1, soluble	BC132258|Acp1|11431|acid phosphatase 1, soluble	BC145199|Acp1|11431|acid phosphatase 1, soluble	AK082955|Acp1|11431|acid phosphatase 1, soluble	BC096368|Acp1|11431|acid phosphatase 1, soluble	AK019186|Acp1|11431|acid phosphatase 1, soluble	AK170284|Acp1|11431|acid phosphatase 1, soluble	AK167887|Acp1|11431|acid phosphatase 1, soluble	AK014603|Acp1|11431|acid phosphatase 1, soluble	AK136144|Acp1|11431|acid phosphatase 1, soluble	AK018329|Acp1|11431|acid phosphatase 1, soluble	AK152429|Acp1|11431|acid phosphatase 1, soluble	NM_001110239|Acp1|11431|acid phosphatase 1, soluble	NM_021330|Acp1|11431|acid phosphatase 1, soluble
mm9_v1_chr7_+_90780446_90780552	0.0546452	GUCAGUU	AK077328|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK142503|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK080060|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK085852|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK009980|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	BC031733|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AK158178|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	BC058226|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	NM_023377|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AY007808|Stard5|170460|StAR-related lipid transfer (START) domain containing 5	AF480302|Stard5|170460|StAR-related lipid transfer (START) domain containing 5
mm9_v1_chr7_-_31065400_31065455	0.0545897	GUCAGUU	AK154592|Wdr62|233064|WD repeat domain 62	BC054747|Wdr62|233064|WD repeat domain 62	NM_146186|Wdr62|233064|WD repeat domain 62
mm9_v1_chr15_+_44027680_44027795	0.0544645	GUCAGUU	AK134591|Trhr|22045|thyrotropin releasing hormone receptor	NM_013696|Trhr|22045|thyrotropin releasing hormone receptor	M59811|Trhr|22045|thyrotropin releasing hormone receptor	M94384|Trhr|22045|thyrotropin releasing hormone receptor	BC109005|Trhr|22045|thyrotropin releasing hormone receptor	BC109006|Trhr|22045|thyrotropin releasing hormone receptor	BC128269|Trhr|22045|thyrotropin releasing hormone receptor
mm9_v1_chr2_+_30808463_30808542	0.0544425	GUCAGUU	AK054404|Tor1b|30934|torsin family 1, member B	AK169692|Tor1b|30934|torsin family 1, member B	AK017290|Tor1b|30934|torsin family 1, member B	AK149754|Tor1b|30934|torsin family 1, member B	AJ297743|Tor1b|30934|torsin family 1, member B	NM_133673|Tor1b|30934|torsin family 1, member B	BC018456|Tor1b|30934|torsin family 1, member B	AK159843|Tor1b|30934|torsin family 1, member B
mm9_v1_chr4_+_123582074_123582311	0.0542285	GUCAGUU	BC048478|Mycbp|56309|c-myc binding protein	AK033289|Mycbp|56309|c-myc binding protein	AK077633|Mycbp|56309|c-myc binding protein	AK037661|Mycbp|56309|c-myc binding protein	AK077762|Mycbp|56309|c-myc binding protein	AK077995|Mycbp|56309|c-myc binding protein	AK145773|Mycbp|56309|c-myc binding protein	NM_019660|Mycbp|56309|c-myc binding protein	BC028344|Mycbp|56309|c-myc binding protein	AB015858|Mycbp|56309|c-myc binding protein
mm9_v1_chr8_+_90642636_90642724	0.0534619	GUCAGUU	NM_029074|Tmem188|382030|transmembrane protein 188	AK146578|Tmem188|382030|transmembrane protein 188	BC018498|Tmem188|382030|transmembrane protein 188	AK017198|Tmem188|382030|transmembrane protein 188	BC094385|Tmem188|382030|transmembrane protein 188	BC118981|Tmem188|382030|transmembrane protein 188	BC148291|Tmem188|382030|transmembrane protein 188
mm9_v1_chr11_+_90499446_90499511	0.0534219	GUCAGUU	AK008096|Cox11|69802|COX11 homolog, cytochrome c oxidase assembly protein (yeast)	BC061233|Cox11|69802|COX11 homolog, cytochrome c oxidase assembly protein (yeast)	AK172067|Cox11|69802|COX11 homolog, cytochrome c oxidase assembly protein (yeast)	AK143937|Cox11|69802|COX11 homolog, cytochrome c oxidase assembly protein (yeast)	NM_199008|Cox11|69802|COX11 homolog, cytochrome c oxidase assembly protein (yeast)
mm9_v1_chr8_+_119445639_119445639	0.0528639	GUCAGUU	AK012097|Cenpn|72155|centromere protein N	NM_028131|Cenpn|72155|centromere protein N
mm9_v1_chr14_+_27399015_27399092	0.0521066	GUCAGUU	AK054295|Fam116a|211922|family with sequence similarity 116, member A	NM_001134465|Fam116a|211922|family with sequence similarity 116, member A	NM_145969|Fam116a|211922|family with sequence similarity 116, member A	AK132219|Fam116a|211922|family with sequence similarity 116, member A	AK131163|Fam116a|211922|family with sequence similarity 116, member A	BC025603|Fam116a|211922|family with sequence similarity 116, member A	AK161908|Fam116a|211922|family with sequence similarity 116, member A	AK054197|Fam116a|211922|family with sequence similarity 116, member A
mm9_v1_chr2_-_118082593_118082701	0.052101	GUCAGUU	BC125024|Fsip1|71313|fibrous sheath-interacting protein 1	AK017026|Fsip1|71313|fibrous sheath-interacting protein 1	AK005924|Fsip1|71313|fibrous sheath-interacting protein 1	AF448787|Fsip1|71313|fibrous sheath-interacting protein 1	NM_027759|Fsip1|71313|fibrous sheath-interacting protein 1
mm9_v1_chr10_-_86168115_86168230	0.0518992	GUCAGUU	BC010445|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	M16370|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	J03297|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	NM_011631|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	BC011439|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK151413|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK150811|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK153550|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK160093|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK165975|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK168952|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK169090|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK159974|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chrX_-_39265047_39265129	0.0514997	GUCAGUU	AK140950|Thoc2|331401|THO complex 2	AK138023|Thoc2|331401|THO complex 2	NM_001033422|Thoc2|331401|THO complex 2	AK137966|Thoc2|331401|THO complex 2
mm9_v1_chr2_-_68309996_68310080	0.0508874	GUCAGUU	AK017292|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	AF099988|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	BC064443|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	NM_016866|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	AK148456|Stk39|53416|serine/threonine kinase 39, STE20/SPS1 homolog (yeast)
mm9_v1_chr12_-_106923394_106923487	0.0503276	GUCAGUU	AK085790|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	AK083213|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	BC062182|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	AK086802|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)	NM_029654|Atg2b|76559|ATG2 autophagy related 2 homolog B (S. cerevisiae)
mm9_v1_chr12_-_99975614_99975748	0.0499659	GUCAGUU	BC098500|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	NM_001146199|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21
mm9_v1_chr19_-_29122186_29122463	0.0496232	GUCAGUU	AB020203|Ak3|56248|adenylate kinase 3	AK031631|Ak3|56248|adenylate kinase 3	BC024871|Ak3|56248|adenylate kinase 3	NM_021299|Ak3|56248|adenylate kinase 3	BC016432|Ak3|56248|adenylate kinase 3	AK004864|Ak3|56248|adenylate kinase 3	AK008681|Ak3|56248|adenylate kinase 3	BC058191|Ak3|56248|adenylate kinase 3	BC019174|Ak3|56248|adenylate kinase 3	AK007618|Ak3|56248|adenylate kinase 3	AK089027|Ak3|56248|adenylate kinase 3	AK005194|Ak3|56248|adenylate kinase 3	AK149996|Ak3|56248|adenylate kinase 3	AK053644|Ak3|56248|adenylate kinase 3	AK147060|Ak3|56248|adenylate kinase 3
mm9_v1_chr18_+_73732352_73732560	0.0491118	GUCAGUU	NM_001039214|Mex3c|240396|mex3 homolog C (C. elegans)	AK133686|Mex3c|240396|mex3 homolog C (C. elegans)
mm9_v1_chr2_-_52280367_52280416	0.048462	GUCAGUU	BC100307|Arl5a|75423|ADP-ribosylation factor-like 5A	AK147525|Arl5a|75423|ADP-ribosylation factor-like 5A	BC048170|Arl5a|75423|ADP-ribosylation factor-like 5A	BC059931|Arl5a|75423|ADP-ribosylation factor-like 5A	NM_182994|Arl5a|75423|ADP-ribosylation factor-like 5A
mm9_v1_chr4_-_34830178_34830200	0.0479548	GUCAGUU	AK017652|Zfp292|30046|zinc finger protein 292	AK018067|Zfp292|30046|zinc finger protein 292	NM_013889|Zfp292|30046|zinc finger protein 292	BC036997|Zfp292|30046|zinc finger protein 292
mm9_v1_chr11_+_116715041_116715362	0.0469322	GUCAGUU	BC100547|Mfsd11|69900|major facilitator superfamily domain containing 11	AK007898|Mfsd11|69900|major facilitator superfamily domain containing 11	AK032043|Mfsd11|69900|major facilitator superfamily domain containing 11	AK031384|Mfsd11|69900|major facilitator superfamily domain containing 11	BC079583|Mfsd11|69900|major facilitator superfamily domain containing 11	BC088988|Mfsd11|69900|major facilitator superfamily domain containing 11	NM_178620|Mfsd11|69900|major facilitator superfamily domain containing 11	BC145068|Mfsd11|69900|major facilitator superfamily domain containing 11	BC137971|Mfsd11|69900|major facilitator superfamily domain containing 11	BC137970|Mfsd11|69900|major facilitator superfamily domain containing 11	BC016209|Mfsd11|69900|major facilitator superfamily domain containing 11	AF015191|Mfsd11|69900|major facilitator superfamily domain containing 11
mm9_v1_chr15_-_86016336_86016570	0.0463588	GUCAGUU	AK052269|Cerk|223753|ceramide kinase	BC094253|Cerk|223753|ceramide kinase	NM_145475|Cerk|223753|ceramide kinase
mm9_v1_chr6_-_71390592_71390638	0.0459541	GUCAGUU	AK164384|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	NM_024288|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr11_+_34214821_34214821	0.0459515	GUCAGUU	BC072605|Fam196b|574403|family with sequence similarity 196, member B	NM_001025382|Fam196b|574403|family with sequence similarity 196, member B
mm9_v1_chr8_+_54597026_54597158	0.0448079	GUCAGUU	NM_001005847|Aga|11593|aspartylglucosaminidase	BC132227|Aga|11593|aspartylglucosaminidase	BC132229|Aga|11593|aspartylglucosaminidase	BC145297|Aga|11593|aspartylglucosaminidase	S81393|Aga|11593|aspartylglucosaminidase	BC048230|Aga|11593|aspartylglucosaminidase
mm9_v1_chr11_-_88579517_88579542	0.0444269	GUCAGUU	AK156439|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049637|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049688|Msi2|76626|Musashi homolog 2 (Drosophila)	NM_054043|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr10_-_20444654_20444883	0.044073	GUCAGUU	AF190639|Pde7b|29863|phosphodiesterase 7B	BC130267|Pde7b|29863|phosphodiesterase 7B	AK020137|Pde7b|29863|phosphodiesterase 7B	AK040876|Pde7b|29863|phosphodiesterase 7B	NM_013875|Pde7b|29863|phosphodiesterase 7B	AK035385|Pde7b|29863|phosphodiesterase 7B
mm9_v1_chr6_+_116288075_116288140	0.0437883	GUCAGUU	BC053090|March8|71779|membrane-associated ring finger (C3HC4) 8	NM_027920|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr2_+_127161893_127161939	0.0435145	GUCAGUU	AK088059|Dusp2|13537|dual specificity phosphatase 2	AK134067|Dusp2|13537|dual specificity phosphatase 2	NM_010090|Dusp2|13537|dual specificity phosphatase 2	BC048696|Dusp2|13537|dual specificity phosphatase 2	L11330|Dusp2|13537|dual specificity phosphatase 2
mm9_v1_chr7_+_107376116_107376219	0.043409	GUCAGUU	NM_027629|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK039189|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK040513|Pgm2l1|70974|phosphoglucomutase 2-like 1	BC076571|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr8_-_123191878_123192011	0.0431548	GUCAGUU	AK042704|Cox4nb|18117|COX4 neighbor	AK148190|Cox4nb|18117|COX4 neighbor	BC009103|Cox4nb|18117|COX4 neighbor	AK143131|Cox4nb|18117|COX4 neighbor	AK161438|Cox4nb|18117|COX4 neighbor	AF052621|Cox4nb|18117|COX4 neighbor	AK164130|Cox4nb|18117|COX4 neighbor	NM_010926|Cox4nb|18117|COX4 neighbor
mm9_v1_chr18_-_66129715_66129836	0.0427531	GUCAGUU	AY264291|Cplx4|225644|complexin 4	BC016082|Cplx4|225644|complexin 4	NM_145493|Cplx4|225644|complexin 4	AK044262|Cplx4|225644|complexin 4
mm9_v1_chr1_-_166388431_166388540	0.0421238	GUCAGUU	AK010677|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide	NM_009721|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chr5_-_20457608_20457646	0.0408043	GUCAGUU	NM_001080977|Rsbn1l|242860|round spermatid basic protein 1-like
mm9_v1_chr17_-_48548973_48549148	0.0402689	GUCAGUU	AK156487|Nfya|18044|nuclear transcription factor-Y alpha	BC029695|Nfya|18044|nuclear transcription factor-Y alpha	X55315|Nfya|18044|nuclear transcription factor-Y alpha	BC057099|Nfya|18044|nuclear transcription factor-Y alpha	AK137561|Nfya|18044|nuclear transcription factor-Y alpha	AK004729|Nfya|18044|nuclear transcription factor-Y alpha	AK143723|Nfya|18044|nuclear transcription factor-Y alpha	NM_001110832|Nfya|18044|nuclear transcription factor-Y alpha	NM_010913|Nfya|18044|nuclear transcription factor-Y alpha
mm9_v1_chr17_-_27341343_27341419	0.0400109	GUCAGUU	AY640307|Lemd2|224640|LEM domain containing 2	AK143224|Lemd2|224640|LEM domain containing 2	NM_146075|Lemd2|224640|LEM domain containing 2
mm9_v1_chr13_-_38128805_38129027	0.0393183	GUCAGUU	AK016953|Cage1|71213|cancer antigen 1	NM_027724|Cage1|71213|cancer antigen 1	BC082568|Cage1|71213|cancer antigen 1	AK089301|Cage1|71213|cancer antigen 1
mm9_v1_chr2_+_103810274_103810481	0.0392953	GUCAGUU	AK013416|Lmo2|16909|LIM domain only 2	BC057880|Lmo2|16909|LIM domain only 2	NM_001142335|Lmo2|16909|LIM domain only 2	NM_008505|Lmo2|16909|LIM domain only 2
mm9_v1_chr9_+_104472090_104472120	0.0390302	GUCAGUU	AK043692|Cpne4|74020|copine IV	AK014396|Cpne4|74020|copine IV	BC043087|Cpne4|74020|copine IV	BC063081|Cpne4|74020|copine IV	NM_028719|Cpne4|74020|copine IV
mm9_v1_chr13_+_9275741_9275783	0.0389616	GUCAGUU	NM_001081426|Dip2c|208440|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm9_v1_chr3_+_90052083_90052183	0.0384447	GUCAGUU	NM_013901|Slc39a1|30791|solute carrier family 39 (zinc transporter), member 1	AK146175|Slc39a1|30791|solute carrier family 39 (zinc transporter), member 1	BC005474|Slc39a1|30791|solute carrier family 39 (zinc transporter), member 1
mm9_v1_chr9_-_53344748_53344787	0.0381738	GUCAGUU	AK031702|Atm|11920|ataxia telangiectasia mutated homolog (human)	NM_007499|Atm|11920|ataxia telangiectasia mutated homolog (human)	AK139863|Atm|11920|ataxia telangiectasia mutated homolog (human)
mm9_v1_chr1_-_99666564_99666675	0.0379949	GUCAGUU	AK087712|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK149804|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK129140|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	AK166095|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2	NM_173760|Ppip5k2|227399|diphosphoinositol pentakisphosphate kinase 2
mm9_v1_chr1_-_60623487_60623632	0.0376874	GUCAGUU	NM_001045513|Raph1|77300|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm9_v1_chr8_+_108384479_108384590	0.037163	GUCAGUU	BC083165|Nutf2|68051|nuclear transport factor 2	AK152212|Nutf2|68051|nuclear transport factor 2	BC003955|Nutf2|68051|nuclear transport factor 2	NM_026532|Nutf2|68051|nuclear transport factor 2	AK020512|Nutf2|68051|nuclear transport factor 2	AK028410|Nutf2|68051|nuclear transport factor 2	AK002461|Nutf2|68051|nuclear transport factor 2	AK012500|Nutf2|68051|nuclear transport factor 2	AK051049|Nutf2|68051|nuclear transport factor 2	AK168026|Nutf2|68051|nuclear transport factor 2	BC086773|Nutf2|68051|nuclear transport factor 2
mm9_v1_chr7_+_91040481_91040625	0.0371388	GUCAGUU	NM_023403|Mesdc2|67943|mesoderm development candidate 2
mm9_v1_chr16_+_18348311_18348366	0.0369224	GUCAGUU	BC052393|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome	BC056980|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome	NM_033474|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome
mm9_v1_chr5_+_151476361_151476427	0.0369133	GUCAGUU	AY102267|Pds5b|100710|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	NM_175310|Pds5b|100710|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm9_v1_chr6_+_66485368_66485514	0.0368576	GUCAGUU	AK166065|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	AK012590|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	AK010401|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	AK082934|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	NM_019499|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	AK160286|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	U83902|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)	BC089012|Mad2l1|56150|MAD2 mitotic arrest deficient-like 1 (yeast)
mm9_v1_chr1_+_183282758_183282760	0.0363569	GUCAGUU	AK013789|Cnih3|72978|cornichon homolog 3 (Drosophila)	NM_001160211|Cnih3|72978|cornichon homolog 3 (Drosophila)	NM_001160212|Cnih3|72978|cornichon homolog 3 (Drosophila)	NM_028408|Cnih3|72978|cornichon homolog 3 (Drosophila)	AK033911|Cnih3|72978|cornichon homolog 3 (Drosophila)
mm9_v1_chr18_+_53405310_53405315	0.036322	GUCAGUU	BC051168|Snx24|69226|sorting nexing 24	NM_029394|Snx24|69226|sorting nexing 24
mm9_v1_chr14_-_73725576_73725603	0.0361775	GUCAGUU	AK011246|Rb1|19645|retinoblastoma 1	BC096525|Rb1|19645|retinoblastoma 1	NM_009029|Rb1|19645|retinoblastoma 1
mm9_v1_chr4_+_97248556_97248685	0.0355691	GUCAGUU	D90173|Nfia|18027|nuclear factor I/A	AK048696|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene	AK139357|Nfia|18027|nuclear factor I/A	NM_001122952|Nfia|18027|nuclear factor I/A	AK051361|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene
mm9_v1_chr2_-_73224394_73224535	0.0353489	GUCAGUU	AK090081|Gpr155|68526|G protein-coupled receptor 155	BC115698|Gpr155|68526|G protein-coupled receptor 155	AK089436|Gpr155|68526|G protein-coupled receptor 155	HM161763|Gpr155|68526|G protein-coupled receptor 155	HM161764|Gpr155|68526|G protein-coupled receptor 155	HM161765|Gpr155|68526|G protein-coupled receptor 155	HM161766|Gpr155|68526|G protein-coupled receptor 155	NM_001080707|Gpr155|68526|G protein-coupled receptor 155	NM_001190297|Gpr155|68526|G protein-coupled receptor 155
mm9_v1_chr9_+_56266618_56266679	0.0338563	GUCAGUU	AK088542|Hmg20a|66867|high mobility group 20A	AK032790|Hmg20a|66867|high mobility group 20A	AK039222|Hmg20a|66867|high mobility group 20A	AK004596|Hmg20a|66867|high mobility group 20A	AK086346|Hmg20a|66867|high mobility group 20A	AK154075|Hmg20a|66867|high mobility group 20A	BC013804|Hmg20a|66867|high mobility group 20A	DQ182735|Hmg20a|66867|high mobility group 20A	NM_025812|Hmg20a|66867|high mobility group 20A	AL355705|Hmg20a|66867|high mobility group 20A
mm9_v1_chr14_+_119337150_119337225	0.0335973	GUCAGUU	NM_008929|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	AK146097|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	AK148270|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	BC013766|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	U28423|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3
mm9_v1_chr5_-_37187944_37188018	0.033482	GUCAGUU	AK009827|Mrfap1|67568|Morf4 family associated protein 1	BC010209|Mrfap1|67568|Morf4 family associated protein 1	AK170909|Mrfap1|67568|Morf4 family associated protein 1	AK170984|Mrfap1|67568|Morf4 family associated protein 1	AK017832|Mrfap1|67568|Morf4 family associated protein 1	AK167112|Mrfap1|67568|Morf4 family associated protein 1	AB041651|Mrfap1|67568|Morf4 family associated protein 1	AK159464|Mrfap1|67568|Morf4 family associated protein 1	AK005313|Mrfap1|67568|Morf4 family associated protein 1	NM_026242|Mrfap1|67568|Morf4 family associated protein 1
mm9_v1_chr5_-_144493077_144493148	0.0328704	GUCAGUU	NM_029749|Usp42|76800|ubiquitin specific peptidase 42
mm9_v1_chr14_+_31528800_31528932	0.0328437	GUCAGUU	AK154826|Sfmbt1|54650|Scm-like with four mbt domains 1	NM_001166532|Sfmbt1|54650|Scm-like with four mbt domains 1	BC036972|Sfmbt1|54650|Scm-like with four mbt domains 1	AK142330|Sfmbt1|54650|Scm-like with four mbt domains 1	BC018217|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr11_+_43495499_43495538	0.0325264	GUCAGUU	NM_001164231|Pwwp2a|70802|PWWP domain containing 2A	NM_027557|Pwwp2a|70802|PWWP domain containing 2A	AK173305|Pwwp2a|70802|PWWP domain containing 2A
mm9_v1_chr6_-_58857000_58857134	0.0319166	GUCAGUU	AB041556|Nap1l5|58243|nucleosome assembly protein 1-like 5	BC046332|Nap1l5|58243|nucleosome assembly protein 1-like 5	NM_021432|Nap1l5|58243|nucleosome assembly protein 1-like 5
mm9_v1_chr7_+_97591287_97591327	0.0313836	GUCAGUU	NM_145151|Crebzf|233490|CREB/ATF bZIP transcription factor
mm9_v1_chr6_-_24614975_24615061	0.0313349	GUCAGUU	AK143969|Wasl|73178|Wiskott-Aldrich syndrome-like (human)	AK014104|Wasl|73178|Wiskott-Aldrich syndrome-like (human)	BC058642|Wasl|73178|Wiskott-Aldrich syndrome-like (human)	NM_001167745|Wasl|73178|Wiskott-Aldrich syndrome-like (human)	NM_028459|Wasl|73178|Wiskott-Aldrich syndrome-like (human)
mm9_v1_chr2_-_180444687_180444716	0.0301843	GUCAGUU	BC096662|Dido1|23856|death inducer-obliterator 1	AK129117|Dido1|23856|death inducer-obliterator 1	BC060249|Dido1|23856|death inducer-obliterator 1	NM_177852|Dido1|23856|death inducer-obliterator 1
mm9_v1_chr16_-_98144201_98144247	0.0301112	GUCAGUU	AK077731|C2cd2|207781|C2 calcium-dependent domain containing 2	BC043688|C2cd2|207781|C2 calcium-dependent domain containing 2	AK017896|C2cd2|207781|C2 calcium-dependent domain containing 2	AK143875|C2cd2|207781|C2 calcium-dependent domain containing 2	AK220454|C2cd2|207781|C2 calcium-dependent domain containing 2	AK086520|C2cd2|207781|C2 calcium-dependent domain containing 2	NM_174847|C2cd2|207781|C2 calcium-dependent domain containing 2
mm9_v1_chr15_+_81633102_81633182	0.0298349	GUCAGUU	NM_153484|Tef|21685|thyrotroph embryonic factor	AK045575|Tef|21685|thyrotroph embryonic factor	AK053229|Tef|21685|thyrotroph embryonic factor	AK027965|Tef|21685|thyrotroph embryonic factor	AK141606|Tef|21685|thyrotroph embryonic factor
mm9_v1_chr12_+_104553168_104553168	0.0297582	GUCAGUU	NM_001195726|Fam181a|544888|family with sequence similarity 181, member A
mm9_v1_chr13_-_107726930_107727002	0.0292053	GUCAGUU	BC031900|Ipo11|76582|importin 11	BC029746|Ipo11|76582|importin 11	NM_029665|Ipo11|76582|importin 11
mm9_v1_chrX_+_39421012_39421147	0.0291038	GUCAGUU	NM_009688|Xiap|11798|X-linked inhibitor of apoptosis
mm9_v1_chr3_-_30868320_30868353	0.0282834	GUCAGUU	BC132533|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145123|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145124|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AJ414610|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK037348|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK087339|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166208|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166296|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165954|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165955|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165956|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_153421|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr19_+_4962305_4962355	0.0280697	GUCAGUU	NM_025553|Mrpl11|66419|mitochondrial ribosomal protein L11	AK010329|Mrpl11|66419|mitochondrial ribosomal protein L11	AB049639|Mrpl11|66419|mitochondrial ribosomal protein L11	AK167247|Mrpl11|66419|mitochondrial ribosomal protein L11	AK002797|Mrpl11|66419|mitochondrial ribosomal protein L11	BC046750|Mrpl11|66419|mitochondrial ribosomal protein L11
mm9_v1_chr7_+_134439804_134439861	0.0273387	GUCAGUU	AK156251|Itgal|16408|integrin alpha L	AK172394|Itgal|16408|integrin alpha L	AK154115|Itgal|16408|integrin alpha L	AK169628|Itgal|16408|integrin alpha L	NM_008400|Itgal|16408|integrin alpha L
mm9_v1_chr1_+_107560433_107560513	0.0263295	GUCAGUU	AK035724|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	NM_029349|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	NM_173187|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	AK148005|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	BC051567|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	BC117950|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	BC117949|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene	AK009628|2310035C23Rik|227446|RIKEN cDNA 2310035C23 gene
mm9_v1_chr8_-_38015410_38015497	0.0255547	GUCAGUU	AK053142|A730069N07Rik|244425|RIKEN cDNA A730069N07 gene	AK043205|A730069N07Rik|244425|RIKEN cDNA A730069N07 gene	AK045326|A730069N07Rik|244425|RIKEN cDNA A730069N07 gene	NM_178735|A730069N07Rik|244425|RIKEN cDNA A730069N07 gene
mm9_v1_chr11_+_4086804_4086893	0.0255009	GUCAGUU	AK140872|Tbc1d10a|103724|TBC1 domain family, member 10a	AK220243|Tbc1d10a|103724|TBC1 domain family, member 10a	BC018300|Tbc1d10a|103724|TBC1 domain family, member 10a	NM_134023|Tbc1d10a|103724|TBC1 domain family, member 10a	AK153677|Tbc1d10a|103724|TBC1 domain family, member 10a	BC037230|Tbc1d10a|103724|TBC1 domain family, member 10a
mm9_v1_chr6_-_137118238_137118241	0.0253117	GUCAGUU	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr6_+_29997972_29998071	0.0248805	GUCAGUU	AK082580|Nrf1|18181|nuclear respiratory factor 1	NM_001164226|Nrf1|18181|nuclear respiratory factor 1	NM_001164227|Nrf1|18181|nuclear respiratory factor 1	NM_001164228|Nrf1|18181|nuclear respiratory factor 1	NM_001164230|Nrf1|18181|nuclear respiratory factor 1	NM_010938|Nrf1|18181|nuclear respiratory factor 1	AK029034|Nrf1|18181|nuclear respiratory factor 1	AK014494|Nrf1|18181|nuclear respiratory factor 1	AK036604|Nrf1|18181|nuclear respiratory factor 1	AK037697|Nrf1|18181|nuclear respiratory factor 1	AF098077|Nrf1|18181|nuclear respiratory factor 1	AF064728|Nrf1|18181|nuclear respiratory factor 1	AK050861|Nrf1|18181|nuclear respiratory factor 1	AK134483|Nrf1|18181|nuclear respiratory factor 1
mm9_v1_chr14_+_26278670_26278824	0.0239368	GUCAGUU	AK138053|Zmiz1|328365|zinc finger, MIZ-type containing 1	BC058646|Zmiz1|328365|zinc finger, MIZ-type containing 1	AK054366|Zmiz1|328365|zinc finger, MIZ-type containing 1	BC065120|Zmiz1|328365|zinc finger, MIZ-type containing 1	NM_183208|Zmiz1|328365|zinc finger, MIZ-type containing 1	AK169397|Zmiz1|328365|zinc finger, MIZ-type containing 1
mm9_v1_chr13_-_85428957_85429102	0.0230079	GUCAGUU	NM_145452|Rasa1|218397|RAS p21 protein activator 1	AK046620|Rasa1|218397|RAS p21 protein activator 1
mm9_v1_chr6_-_33010151_33010266	0.0219373	GUCAGUU	AK003519|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	NM_025336|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC032987|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK145337|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK006643|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC021941|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK050063|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002263|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002889|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3
mm9_v1_chr8_+_63111621_63111675	0.0215296	GUCAGUU	AK089654|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_027756|Mfap3l|71306|microfibrillar-associated protein 3-like	BC095950|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr15_+_81767188_81767324	0.0208411	GUCAGUU	NM_145473|Csdc2|105859|cold shock domain containing C2, RNA binding	AK132493|Csdc2|105859|cold shock domain containing C2, RNA binding	AK028916|Csdc2|105859|cold shock domain containing C2, RNA binding
mm9_v1_chr4_+_40669908_40669973	0.0198557	GUCAGUU	NM_001164671|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	NM_001164672|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1
mm9_v1_chr7_-_87080143_87080213	0.0198443	GUCAGUU	BC031379|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	AK051261|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	NM_027420|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	AK039350|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	AK011654|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	AK156013|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene
mm9_v1_chr9_-_50817077_50817177	0.0194507	GUCAGUU	AB067780|Sik2|235344|salt inducible kinase 2	AK090386|Sik2|235344|salt inducible kinase 2	AK028526|Sik2|235344|salt inducible kinase 2	AK041032|Sik2|235344|salt inducible kinase 2	NM_178710|Sik2|235344|salt inducible kinase 2
mm9_v1_chr5_-_87335956_87335985	0.0192535	GUCAGUU	BC028826|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	NM_153598|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	AK145951|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34
mm9_v1_chr6_+_4853319_4853431	0.0187385	GUCAGUU	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr11_+_105042843_105042862	0.0186771	GUCAGUU	AK165667|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)	NM_001112705|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)	NM_011903|Tlk2|24086|tousled-like kinase 2 (Arabidopsis)
mm9_v1_chr4_+_154338216_154338246	0.0182706	GUCAGUU	AK050894|Pank4|269614|pantothenate kinase 4	BC050089|Pank4|269614|pantothenate kinase 4	NM_172990|Pank4|269614|pantothenate kinase 4
mm9_v1_chr3_-_138738152_138738164	0.0173539	GUCAGUU	AK158465|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	NM_001040690|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	NM_145544|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1	AK172052|Rap1gds1|229877|RAP1, GTP-GDP dissociation stimulator 1
mm9_v1_chr2_-_4933760_4933836	0.0171288	GUCAGUU	AK021211|Mcm10|70024|minichromosome maintenance deficient 10 (S. cerevisiae)	AK041406|Mcm10|70024|minichromosome maintenance deficient 10 (S. cerevisiae)	AK030780|Mcm10|70024|minichromosome maintenance deficient 10 (S. cerevisiae)	BC094576|Mcm10|70024|minichromosome maintenance deficient 10 (S. cerevisiae)	NM_027290|Mcm10|70024|minichromosome maintenance deficient 10 (S. cerevisiae)
mm9_v1_chr5_+_138526303_138526341	0.0168142	GUCAGUU	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr11_-_106117095_106117155	0.0166996	GUCAGUU	AK031514|Ftsj3|56095|FtsJ homolog 3 (E. coli)	BC012281|Ftsj3|56095|FtsJ homolog 3 (E. coli)	AK004996|Ftsj3|56095|FtsJ homolog 3 (E. coli)	NM_025310|Ftsj3|56095|FtsJ homolog 3 (E. coli)	AK145490|Ftsj3|56095|FtsJ homolog 3 (E. coli)
mm9_v1_chr19_+_46673553_46673665	0.0165761	GUCAGUU	NM_001177812|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	NM_146099|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK087487|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	BC026369|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK154686|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK169294|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	BC058949|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed
mm9_v1_chr10_-_70700764_70701027	0.0151597	GUCAGUU	U57939|Tfam|21780|transcription factor A, mitochondrial	AK004857|Tfam|21780|transcription factor A, mitochondrial	BC001987|Tfam|21780|transcription factor A, mitochondrial	BC083084|Tfam|21780|transcription factor A, mitochondrial	AK050446|Tfam|21780|transcription factor A, mitochondrial	AK167348|Tfam|21780|transcription factor A, mitochondrial	NM_009360|Tfam|21780|transcription factor A, mitochondrial	AK163563|Tfam|21780|transcription factor A, mitochondrial	AK017974|Tfam|21780|transcription factor A, mitochondrial	AK161747|Tfam|21780|transcription factor A, mitochondrial	AK167777|Tfam|21780|transcription factor A, mitochondrial	AK169808|Tfam|21780|transcription factor A, mitochondrial	U63859|Tfam|21780|transcription factor A, mitochondrial	U63858|Tfam|21780|transcription factor A, mitochondrial	U63712|Tfam|21780|transcription factor A, mitochondrial
mm9_v1_chr7_-_129245303_129245368	0.014815	GUCAGUU	AK167447|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK089103|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC092379|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC060951|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018717|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK008788|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK009698|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK010307|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK011302|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018688|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK151719|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK152995|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	NM_028177|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm9_v1_chr15_+_25772997_25773018	0.0146295	GUCAGUU	NM_001034851|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chrX_+_97963061_97963090	0.0145646	GUCAGUU	AK122474|Dlg3|53310|discs, large homolog 3 (Drosophila)	NM_001177778|Dlg3|53310|discs, large homolog 3 (Drosophila)	BC094368|Dlg3|53310|discs, large homolog 3 (Drosophila)	NM_016747|Dlg3|53310|discs, large homolog 3 (Drosophila)	D87117|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chr4_+_115500670_115500814	0.0145373	GUCAGUU	AK084014|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	AK148476|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	NM_175308|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	BC099740|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	BC137587|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	BC137589|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)
mm9_v1_chr15_-_36724292_36724292	0.0143133	GUCAGUU	NM_011740|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr3_+_129235284_129235325	0.0142957	GUCAGUU	AK087440|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK029029|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	NM_130450|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC051041|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AY053453|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chr11_+_68316520_68316601	0.014135	GUCAGUU	NM_001004435|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	NM_001081566|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK169948|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK036623|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	BC028998|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK171063|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK151178|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK153039|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6
mm9_v1_chr12_+_117643874_117643931	0.0136668	GUCAGUU	AK138871|Ncapg2|76044|non-SMC condensin II complex, subunit G2	NM_133762|Ncapg2|76044|non-SMC condensin II complex, subunit G2
mm9_v1_chr13_-_38085986_38086062	0.0121567	GUCAGUU	BC011255|Ssr1|107513|signal sequence receptor, alpha	AK010884|Ssr1|107513|signal sequence receptor, alpha	AK167793|Ssr1|107513|signal sequence receptor, alpha	AK160285|Ssr1|107513|signal sequence receptor, alpha	AF326229|Ssr1|107513|signal sequence receptor, alpha	AF395811|Ssr1|107513|signal sequence receptor, alpha	AY993942|Ssr1|107513|signal sequence receptor, alpha	AK166235|Ssr1|107513|signal sequence receptor, alpha	AK031538|Ssr1|107513|signal sequence receptor, alpha	AB009295|Ssr1|107513|signal sequence receptor, alpha	NM_025965|Ssr1|107513|signal sequence receptor, alpha
mm9_v1_chr16_+_44139908_44140168	0.0120022	GUCAGUU	NM_028108|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK167141|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK168394|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC057117|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK135658|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK156791|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK011160|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK145345|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC046283|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC004086|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	AK198408|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit	BC055846|Naa50|72117|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm9_v1_chr2_+_23012016_23012208	0.0117915	GUCAGUU	AK032273|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AK045141|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AF090430|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AY136287|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	BC007128|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AK079175|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	NM_013771|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AK137665|Yme1l1|27377|YME1-like 1 (S. cerevisiae)	AY136286|Yme1l1|27377|YME1-like 1 (S. cerevisiae)
mm9_v1_chr10_-_14264800_14264841	0.01163	GUCAGUU	AB183545|Gpr126|215798|G protein-coupled receptor 126	NM_001002268|Gpr126|215798|G protein-coupled receptor 126
mm9_v1_chr7_+_71432538_71432641	0.0115367	GUCAGUU	AK088715|Mtmr10|233315|myotubularin related protein 10	NM_172742|Mtmr10|233315|myotubularin related protein 10	BC041672|Mtmr10|233315|myotubularin related protein 10
mm9_v1_chr6_-_97129076_97129149	0.0113893	GUCAGUU	AK144898|Tmf1|232286|TATA element modulatory factor 1	AK144729|Tmf1|232286|TATA element modulatory factor 1	BC150931|Tmf1|232286|TATA element modulatory factor 1	NM_001081111|Tmf1|232286|TATA element modulatory factor 1
mm9_v1_chr1_+_83156336_83156343	0.0110555	GUCAGUU	AK016977|Wdr69|71227|WD repeat domain 69	BC049704|Wdr69|71227|WD repeat domain 69	BC144994|Wdr69|71227|WD repeat domain 69	BC145995|Wdr69|71227|WD repeat domain 69	NM_027725|Wdr69|71227|WD repeat domain 69	AK016201|Wdr69|71227|WD repeat domain 69
mm9_v1_chr1_+_176431933_176432011	0.0109658	GUCAGUU	BC094606|Fmn2|54418|formin 2	NM_019445|Fmn2|54418|formin 2	AF218940|Fmn2|54418|formin 2
mm9_v1_chr6_-_28781687_28781746	0.0109086	GUCAGUU	BC117833|Lrrc4|192198|leucine rich repeat containing 4	BC117834|Lrrc4|192198|leucine rich repeat containing 4	AF300458|Lrrc4|192198|leucine rich repeat containing 4	BC012209|Lrrc4|192198|leucine rich repeat containing 4	DQ177325|Lrrc4|192198|leucine rich repeat containing 4	NM_138682|Lrrc4|192198|leucine rich repeat containing 4
mm9_v1_chr3_-_87734096_87734116	0.0106384	GUCAGUU	NM_153562|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1
mm9_v1_chr12_-_85749901_85749994	0.0105871	GUCAGUU	AK085871|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK088455|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK081435|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK037736|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK163688|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK031581|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK036641|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK045828|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK080265|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	NM_001026214|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	NM_007647|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr7_+_125999265_125999288	0.0105557	GUCAGUU	AK132322|Iqck|434232|IQ motif containing K	AK143223|Iqck|434232|IQ motif containing K	AK138400|Iqck|434232|IQ motif containing K	NM_001081446|Iqck|434232|IQ motif containing K
mm9_v1_chr7_+_62090614_62090614	0.0100625	GUCAGUU	AY164459|Luzp2|233271|leucine zipper protein 2	NM_178705|Luzp2|233271|leucine zipper protein 2
mm9_v1_chr9_+_108997946_108997990	0.00977917	GUCAGUU	NM_172775|Plxnb1|235611|plexin B1
mm9_v1_chr1_-_88567078_88567149	0.0093844	GUCAGUU	BC111834|Nppc|18159|natriuretic peptide type C	AK036176|Nppc|18159|natriuretic peptide type C	NM_010933|Nppc|18159|natriuretic peptide type C	AK020093|Nppc|18159|natriuretic peptide type C
mm9_v1_chr15_+_21041206_21041206	0.0092756	GUCAGUU	BC086655|Cdh12|215654|cadherin 12	NM_001008420|Cdh12|215654|cadherin 12
mm9_v1_chr18_+_34380575_34380671	0.00910142	GUCAGUU	AK042021|Apc|11789|adenomatosis polyposis coli	AK080907|Apc|11789|adenomatosis polyposis coli	NM_007462|Apc|11789|adenomatosis polyposis coli	AK046280|Apc|11789|adenomatosis polyposis coli	AK045053|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr5_+_30559138_30559249	0.00906643	GUCAGUU	NM_027652|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK040494|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK079325|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK083973|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK140416|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC106097|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK048011|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK014530|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC115783|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC117551|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK122544|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK040745|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm9_v1_chr1_-_183772442_183772553	0.00847146	GUCAGUU	BC021516|Lbr|98386|lamin B receptor	AK166850|Lbr|98386|lamin B receptor	AK167157|Lbr|98386|lamin B receptor	AK033459|Lbr|98386|lamin B receptor	AK088179|Lbr|98386|lamin B receptor	AK030606|Lbr|98386|lamin B receptor	BC042522|Lbr|98386|lamin B receptor	AK151798|Lbr|98386|lamin B receptor	AK161762|Lbr|98386|lamin B receptor	AK028426|Lbr|98386|lamin B receptor	NM_133815|Lbr|98386|lamin B receptor
mm9_v1_chr1_-_88479034_88479140	0.0071828	GUCAGUU	AF039216|Pde6d|18582|phosphodiesterase 6D, cGMP-specific, rod, delta	BC005636|Pde6d|18582|phosphodiesterase 6D, cGMP-specific, rod, delta	NM_008801|Pde6d|18582|phosphodiesterase 6D, cGMP-specific, rod, delta	AK141209|Pde6d|18582|phosphodiesterase 6D, cGMP-specific, rod, delta	AK170067|Pde6d|18582|phosphodiesterase 6D, cGMP-specific, rod, delta
mm9_v1_chr4_+_45354940_45354977	0.00715853	GUCAGUU	AK170534|Dcaf10|242418|DDB1 and CUL4 associated factor 10	AK165246|Dcaf10|242418|DDB1 and CUL4 associated factor 10	NM_153167|Dcaf10|242418|DDB1 and CUL4 associated factor 10
mm9_v1_chr3_+_89324085_89324085	0.00703911	GUCAGUU	AK137738|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK170218|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_080466|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm9_v1_chr9_+_66561492_66561635	0.00696464	GUCAGUU	NM_178396|Car12|76459|carbonic anyhydrase 12	AK052639|Car12|76459|carbonic anyhydrase 12	AK157977|Car12|76459|carbonic anyhydrase 12	AK037694|Car12|76459|carbonic anyhydrase 12	AK166132|Car12|76459|carbonic anyhydrase 12	BC031385|Car12|76459|carbonic anyhydrase 12	BC035941|Car12|76459|carbonic anyhydrase 12	AK170859|Car12|76459|carbonic anyhydrase 12	BC033432|Car12|76459|carbonic anyhydrase 12
mm9_v1_chr4_+_15192892_15192977	0.00684125	GUCAGUU	AK156282|Tmem64|100201|transmembrane protein 64	NM_181401|Tmem64|100201|transmembrane protein 64	AY147882|Tmem64|100201|transmembrane protein 64	BC030341|Tmem64|100201|transmembrane protein 64
mm9_v1_chr3_-_89083562_89083576	0.00657343	GUCAGUU	AK009144|Efna1|13636|ephrin A1	NM_010107|Efna1|13636|ephrin A1
mm9_v1_chr5_+_32761332_32761346	0.00643698	GUCAGUU	NM_172707|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166416|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr11_-_30098163_30098286	0.00627449	GUCAGUU	AF017112|Spnb2|20742|spectrin beta 2	AF016040|Spnb2|20742|spectrin beta 2	AK079842|Spnb2|20742|spectrin beta 2	AK157727|Spnb2|20742|spectrin beta 2	AK169544|Spnb2|20742|spectrin beta 2	NM_009260|Spnb2|20742|spectrin beta 2
mm9_v1_chrX_+_139997806_139997811	0.00514426	GUCAGUU	NM_008778|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	BC053403|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr11_-_118151298_118151557	0.00513331	GUCAGUU	AK129363|Usp36|72344|ubiquitin specific peptidase 36	AK079342|Usp36|72344|ubiquitin specific peptidase 36	AK165635|Usp36|72344|ubiquitin specific peptidase 36	AK049205|Usp36|72344|ubiquitin specific peptidase 36	AK028572|Usp36|72344|ubiquitin specific peptidase 36	NM_001033528|Usp36|72344|ubiquitin specific peptidase 36
mm9_v1_chr6_-_39675456_39675512	0.00463192	GUCAGUU	AK140431|Braf|109880|Braf transforming gene	NM_139294|Braf|109880|Braf transforming gene
mm9_v1_chr16_-_78576898_78576912	0.004446	GUCAGUU	AK009258|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed	NM_025967|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed
mm9_v1_chr16_-_57754816_57754849	0.00441015	GUCAGUU	BC011061|Col8a1|12837|collagen, type VIII, alpha 1	BC058281|Col8a1|12837|collagen, type VIII, alpha 1	AK159542|Col8a1|12837|collagen, type VIII, alpha 1	AK029203|Col8a1|12837|collagen, type VIII, alpha 1	AK018742|Col8a1|12837|collagen, type VIII, alpha 1	AK032048|Col8a1|12837|collagen, type VIII, alpha 1	AK046370|Col8a1|12837|collagen, type VIII, alpha 1	NM_007739|Col8a1|12837|collagen, type VIII, alpha 1
mm9_v1_chr7_-_128125714_128125825	0.00369412	GUCAGUU	BC117530|Cdr2|12585|cerebellar degeneration-related 2	BC118511|Cdr2|12585|cerebellar degeneration-related 2	AK171706|Cdr2|12585|cerebellar degeneration-related 2	U88588|Cdr2|12585|cerebellar degeneration-related 2	AK157902|Cdr2|12585|cerebellar degeneration-related 2	AK148057|Cdr2|12585|cerebellar degeneration-related 2	NM_007672|Cdr2|12585|cerebellar degeneration-related 2
mm9_v1_chr17_+_70911084_70911126	0.00355466	GUCAGUU	NM_001128181|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK136926|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr6_-_3713622_3713622	0.00324819	GUCAGUU	AK133983|Calcr|12311|calcitonin receptor	NM_001042725|Calcr|12311|calcitonin receptor
mm9_v1_chr1_+_95917069_95917172	0.002859	GUCAGUU	BC070438|Neu4|241159|sialidase 4	NM_173772|Neu4|241159|sialidase 4	AK034236|Neu4|241159|sialidase 4	AB510404|Neu4|241159|sialidase 4
mm9_v1_chr2_-_152657417_152657458	0.00237393	GUCAGUU	BC089016|Bcl2l1|12048|BCL2-like 1	NM_009743|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr13_+_41012969_41013020	0.00221592	GUCAGUU	AY236875|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_133219|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK019924|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	BC054845|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr11_+_54911540_54911679	0.00215115	GUCAGUU	AK149642|Gm2a|14667|GM2 ganglioside activator protein	AK152256|Gm2a|14667|GM2 ganglioside activator protein	U09816|Gm2a|14667|GM2 ganglioside activator protein	BC004651|Gm2a|14667|GM2 ganglioside activator protein	NM_010299|Gm2a|14667|GM2 ganglioside activator protein	L19526|Gm2a|14667|GM2 ganglioside activator protein	CT010289|Gm2a|14667|GM2 ganglioside activator protein	AK179394|Gm2a|14667|GM2 ganglioside activator protein	AK181597|Gm2a|14667|GM2 ganglioside activator protein
mm9_v1_chr15_-_53733989_53734012	0.00192268	GUCAGUU	AK044142|Samd12|320679|sterile alpha motif domain containing 12	BC119383|Samd12|320679|sterile alpha motif domain containing 12	BC119385|Samd12|320679|sterile alpha motif domain containing 12	BC144982|Samd12|320679|sterile alpha motif domain containing 12	NM_177225|Samd12|320679|sterile alpha motif domain containing 12
mm9_v1_chr11_+_59475986_59476013	0.0012732	GUCAGUU	AK154807|Mprip|26936|myosin phosphatase Rho interacting protein	NM_012027|Mprip|26936|myosin phosphatase Rho interacting protein	NM_201245|Mprip|26936|myosin phosphatase Rho interacting protein	AK158296|Mprip|26936|myosin phosphatase Rho interacting protein	AK171089|Mprip|26936|myosin phosphatase Rho interacting protein	AK170849|Mprip|26936|myosin phosphatase Rho interacting protein
mm9_v1_chr8_-_46418352_46418573	0.00114874	GUCAGUU	BC138967|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	BC138968|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	AB056457|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	AK165754|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	AK004724|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	AK150653|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	NM_133969|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3
