mm9_v1_chr15_-_83936038_83936094	9.60309	PAX2.p2	AK010293|Sult4a1|29859|sulfotransferase family 4A, member 1	AK003034|Sult4a1|29859|sulfotransferase family 4A, member 1	AF059257|Sult4a1|29859|sulfotransferase family 4A, member 1	BC051132|Sult4a1|29859|sulfotransferase family 4A, member 1	AK046368|Sult4a1|29859|sulfotransferase family 4A, member 1	AK032195|Sult4a1|29859|sulfotransferase family 4A, member 1	AK159034|Sult4a1|29859|sulfotransferase family 4A, member 1
mm9_v1_chr5_-_108978950_108979047	8.30878	PAX2.p2	BC014803|Cplx1|12889|complexin 1	D38614|Cplx1|12889|complexin 1	AK158166|Cplx1|12889|complexin 1	AK134820|Cplx1|12889|complexin 1	AK159026|Cplx1|12889|complexin 1	NM_007756|Cplx1|12889|complexin 1
mm9_v1_chr10_+_122115755_122115904	6.70937	PAX2.p2	AK043121|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	NM_001110218|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	NM_176919|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK040207|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK077422|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK134804|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK051434|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK220260|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)
mm9_v1_chr11_-_98190774_98191090	6.51949	PAX2.p2	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr5_+_98609872_98610052	5.07455	PAX2.p2	AK050852|Prdm8|77630|PR domain containing 8	NM_029947|Prdm8|77630|PR domain containing 8	AK036202|Prdm8|77630|PR domain containing 8	AK044713|Prdm8|77630|PR domain containing 8	BC141020|Prdm8|77630|PR domain containing 8
mm9_v1_chr19_-_6984020_6984224	4.06318	PAX2.p2	AF110733|Prdx5|54683|peroxiredoxin 5	AK136130|Prdx5|54683|peroxiredoxin 5	AK002383|Prdx5|54683|peroxiredoxin 5	AK003332|Prdx5|54683|peroxiredoxin 5	AK152653|Prdx5|54683|peroxiredoxin 5	AF197951|Prdx5|54683|peroxiredoxin 5	NM_012021|Prdx5|54683|peroxiredoxin 5	AF124994|Prdx5|54683|peroxiredoxin 5
mm9_v1_chrX_-_20498021_20498157	4.01866	PAX2.p2	BC022954|Syn1|20964|synapsin I	NM_001110780|Syn1|20964|synapsin I	NM_013680|Syn1|20964|synapsin I
mm9_v1_chr9_+_58430210_58430222	3.80784	PAX2.p2	AK075610|Nptn|20320|neuroplastin	AK153930|Nptn|20320|neuroplastin	D50463|Nptn|20320|neuroplastin
mm9_v1_chr10_+_75398588_75398659	3.60945	PAX2.p2	BC061190|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10	AK131581|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10	AK075746|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10
mm9_v1_chr2_-_79296732_79296799	3.57753	PAX2.p2	BC094611|Neurod1|18012|neurogenic differentiation 1	BC018241|Neurod1|18012|neurogenic differentiation 1	AK018781|Neurod1|18012|neurogenic differentiation 1	AK005073|Neurod1|18012|neurogenic differentiation 1	NM_010894|Neurod1|18012|neurogenic differentiation 1	AK028055|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr10_+_122116066_122116255	3.51845	PAX2.p2	AK040194|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK029461|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK150309|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)
mm9_v1_chr11_-_101032604_101032630	3.43595	PAX2.p2	BC020025|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3	NM_146030|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3	AK154510|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3	AK164128|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr2_+_155102040_155102281	3.33756	PAX2.p2	AK015020|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	NM_025735|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	AK003122|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	AK003716|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha	BC010596|Map1lc3a|66734|microtubule-associated protein 1 light chain 3 alpha
mm9_v1_chr4_-_147412919_147412952	3.32651	PAX2.p2	AK145053|Clcn6|26372|chloride channel 6	AK165362|Clcn6|26372|chloride channel 6
mm9_v1_chr3_+_104442568_104442606	3.23882	PAX2.p2	AK033516|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK079379|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK088762|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK161701|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK162682|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK166606|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	NM_009196|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	BC014777|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AF058055|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1
mm9_v1_chr11_-_70053281_70053355	3.21528	PAX2.p2	BC021602|Rnasek|52898|ribonuclease, RNase K	BC021603|Rnasek|52898|ribonuclease, RNase K	AK018709|Rnasek|52898|ribonuclease, RNase K	AK171975|Rnasek|52898|ribonuclease, RNase K	BC024417|Rnasek|52898|ribonuclease, RNase K	AK003548|Rnasek|52898|ribonuclease, RNase K	AK009592|Rnasek|52898|ribonuclease, RNase K	NM_173742|Rnasek|52898|ribonuclease, RNase K
mm9_v1_chr14_+_66587319_66587511	3.19683	PAX2.p2	NM_013492|Clu|12759|clusterin	L05670|Clu|12759|clusterin	D14077|Clu|12759|clusterin	AK132030|Clu|12759|clusterin	BC075668|Clu|12759|clusterin	L08235|Clu|12759|clusterin
mm9_v1_chrX_+_133200982_133201022	3.17219	PAX2.p2	AK003156|Tceal3|594844|transcription elongation factor A (SII)-like 3	AK017585|Tceal3|594844|transcription elongation factor A (SII)-like 3	BC027131|Tceal3|594844|transcription elongation factor A (SII)-like 3
mm9_v1_chr5_-_106887469_106887485	3.15256	PAX2.p2	BC055789|Barhl2|104382|BarH-like 2 (Drosophila)
mm9_v1_chr3_-_10440061_10440125	3.11828	PAX2.p2	BC070431|Snx16|74718|sorting nexin 16	AK032055|Snx16|74718|sorting nexin 16	AK015872|Snx16|74718|sorting nexin 16	AK043975|Snx16|74718|sorting nexin 16	AK166422|Snx16|74718|sorting nexin 16	NM_001127191|Snx16|74718|sorting nexin 16	NM_029068|Snx16|74718|sorting nexin 16
mm9_v1_chr9_-_91260619_91260636	3.00456	PAX2.p2	NM_009573|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chr5_+_137506122_137506164	3.00196	PAX2.p2	NM_001039385|Vgf|381677|VGF nerve growth factor inducible
mm9_v1_chr16_-_20621287_20621552	2.98343	PAX2.p2	AK013788|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147550|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147736|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147745|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC157896|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	NM_028420|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2
mm9_v1_chr17_+_37187550_37187798	2.96545	PAX2.p2	BC056990|Gabbr1|54393|gamma-aminobutyric acid (GABA) B receptor, 1	AF120255|Gabbr1|54393|gamma-aminobutyric acid (GABA) B receptor, 1
mm9_v1_chr13_+_118391270_118391304	2.86704	PAX2.p2	AJ225123|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1
mm9_v1_chr6_+_114081227_114081234	2.7965	PAX2.p2	AK140423|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	AK053078|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	NM_172890|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
mm9_v1_chr18_+_38115192_38115292	2.76531	PAX2.p2	NM_153793|Rell2|225392|RELT-like 2	AK044097|Rell2|225392|RELT-like 2	BC038500|Rell2|225392|RELT-like 2
mm9_v1_chr3_-_87804062_87804165	2.71869	PAX2.p2	BC052032|Bcan|12032|brevican	AK144405|Bcan|12032|brevican	X87096|Bcan|12032|brevican
mm9_v1_chr11_+_55017825_55017912	2.62916	PAX2.p2	NM_153139|Slc36a1|215335|solute carrier family 36 (proton/amino acid symporter), member 1	AY211262|Slc36a1|215335|solute carrier family 36 (proton/amino acid symporter), member 1	BC138556|Slc36a1|215335|solute carrier family 36 (proton/amino acid symporter), member 1	BC138558|Slc36a1|215335|solute carrier family 36 (proton/amino acid symporter), member 1
mm9_v1_chr17_-_66426361_66426428	2.6255	PAX2.p2	AK153850|Ankrd12|106585|ankyrin repeat domain 12	BC094292|Ankrd12|106585|ankyrin repeat domain 12	BC050185|Ankrd12|106585|ankyrin repeat domain 12	BC080825|Ankrd12|106585|ankyrin repeat domain 12	BC064777|Ankrd12|106585|ankyrin repeat domain 12	AK012645|Ankrd12|106585|ankyrin repeat domain 12	AK133715|Ankrd12|106585|ankyrin repeat domain 12	NM_001025572|Ankrd12|106585|ankyrin repeat domain 12	AK013457|Ankrd12|106585|ankyrin repeat domain 12
mm9_v1_chr2_-_164683125_164683222	2.54506	PAX2.p2	BC003782|Pltp|18830|phospholipid transfer protein	AK149730|Pltp|18830|phospholipid transfer protein	AK148330|Pltp|18830|phospholipid transfer protein	NM_011125|Pltp|18830|phospholipid transfer protein
mm9_v1_chr7_+_134985164_134985421	2.54298	PAX2.p2	AK145909|Stx4a|20909|syntaxin 4A (placental)	BC011491|Stx4a|20909|syntaxin 4A (placental)	NM_009294|Stx4a|20909|syntaxin 4A (placental)	AK161971|Stx4a|20909|syntaxin 4A (placental)	BC052023|Stx4a|20909|syntaxin 4A (placental)
mm9_v1_chr4_+_129985957_129986021	2.51126	PAX2.p2	AK142156|Fabp3|14077|fatty acid binding protein 3, muscle and heart	BC089542|Fabp3|14077|fatty acid binding protein 3, muscle and heart	BC002082|Fabp3|14077|fatty acid binding protein 3, muscle and heart	X14961|Fabp3|14077|fatty acid binding protein 3, muscle and heart	NM_010174|Fabp3|14077|fatty acid binding protein 3, muscle and heart	U02883|Fabp3|14077|fatty acid binding protein 3, muscle and heart
mm9_v1_chr10_-_49508472_49508559	2.48216	PAX2.p2	D10054|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	AK141539|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	NM_001111268|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	NM_010349|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm9_v1_chr11_+_78136681_78136684	2.44815	PAX2.p2	S72537|Aldoc|11676|aldolase C, fructose-bisphosphate	X03796|Aldoc|11676|aldolase C, fructose-bisphosphate
mm9_v1_chr4_-_117559857_117559990	2.43489	PAX2.p2	AK217120|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	AB060654|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	AK151365|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	BC030393|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	AK021272|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	AK009495|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	AK151847|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	AK152823|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	AK170493|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	AF356006|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	BC009169|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	NM_033617|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B	AK152330|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B
mm9_v1_chr16_-_10313963_10313988	2.40301	PAX2.p2	AK161166|Emp2|13731|epithelial membrane protein 2	BC041670|Emp2|13731|epithelial membrane protein 2	AF346627|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr1_-_137064124_137064257	2.36999	PAX2.p2	AK158275|Gpr37l1|171469|G protein-coupled receptor 37-like 1	NM_134438|Gpr37l1|171469|G protein-coupled receptor 37-like 1
mm9_v1_chr8_+_97508270_97508298	2.36008	PAX2.p2	AK141886|Gpr56|14766|G protein-coupled receptor 56	NM_018882|Gpr56|14766|G protein-coupled receptor 56
mm9_v1_chr9_-_91260597_91260611	2.35479	PAX2.p2	BC063247|Zic1|22771|zinc finger protein of the cerebellum 1	AK159769|Zic1|22771|zinc finger protein of the cerebellum 1	AK139143|Zic1|22771|zinc finger protein of the cerebellum 1	BC060247|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chr8_+_73278577_73278658	2.33304	PAX2.p2	NM_001166399|Rab3a|19339|RAB3A, member RAS oncogene family	NM_009001|Rab3a|19339|RAB3A, member RAS oncogene family	AK161975|Rab3a|19339|RAB3A, member RAS oncogene family	BC053519|Rab3a|19339|RAB3A, member RAS oncogene family	AK005307|Rab3a|19339|RAB3A, member RAS oncogene family	AK005362|Rab3a|19339|RAB3A, member RAS oncogene family
mm9_v1_chr11_+_68901989_68902022	2.23214	PAX2.p2	AK090178|Vamp2|22318|vesicle-associated membrane protein 2
mm9_v1_chr3_-_9833502_9833678	2.20373	PAX2.p2	BC145328|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145761|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145763|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK172106|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156986|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK040230|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK041695|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK089329|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156000|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_001195031|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_053182|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1
mm9_v1_chr9_+_58430031_58430196	2.15819	PAX2.p2	NM_009145|Nptn|20320|neuroplastin	BC039191|Nptn|20320|neuroplastin
mm9_v1_chr11_+_69154265_69154342	2.13815	PAX2.p2	AK002962|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	AK045471|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	AB041807|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	BC021519|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene
mm9_v1_chr4_+_137220675_137220705	2.09852	PAX2.p2	AK172955|Rap1gap|110351|Rap1 GTPase-activating protein
mm9_v1_chr2_+_134611879_134611910	2.09822	PAX2.p2	AK143153|Plcb1|18795|phospholipase C, beta 1	NM_001145830|Plcb1|18795|phospholipase C, beta 1	NM_019677|Plcb1|18795|phospholipase C, beta 1	AK040911|Plcb1|18795|phospholipase C, beta 1
mm9_v1_chr17_-_87846158_87846274	2.07654	PAX2.p2	BC021347|Calm2|12314|calmodulin 2	BC051444|Calm2|12314|calmodulin 2	BC100301|Calm2|12314|calmodulin 2	AK013068|Calm2|12314|calmodulin 2	AK012247|Calm2|12314|calmodulin 2	AK168741|Calm2|12314|calmodulin 2	AK005089|Calm2|12314|calmodulin 2	AK012564|Calm2|12314|calmodulin 2	AK161268|Calm2|12314|calmodulin 2	AK161984|Calm2|12314|calmodulin 2	AK152303|Calm2|12314|calmodulin 2	L31642|Calm2|12314|calmodulin 2	AK160636|Calm2|12314|calmodulin 2	NM_007589|Calm2|12314|calmodulin 2
mm9_v1_chr4_-_150026205_150026286	2.06414	PAX2.p2	AK134677|Slc45a1|242773|solute carrier family 45, member 1	BC051188|Slc45a1|242773|solute carrier family 45, member 1	AK134683|Slc45a1|242773|solute carrier family 45, member 1	AK158002|Slc45a1|242773|solute carrier family 45, member 1	AK082651|Slc45a1|242773|solute carrier family 45, member 1	NM_173774|Slc45a1|242773|solute carrier family 45, member 1
mm9_v1_chr6_+_116158049_116158172	2.06081	PAX2.p2	NM_026585|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed	AK145716|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed	AK168388|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed	AK038318|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed	BC049979|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed	AK161181|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed	AK011156|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed	BC056942|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed	BC040393|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed	AK163765|D6Wsu116e|28006|DNA segment, Chr 6, Wayne State University 116, expressed
mm9_v1_chr19_+_4510471_4510550	2.05657	PAX2.p2	NM_001162946|Pcx|18563|pyruvate carboxylase	AK170596|Pcx|18563|pyruvate carboxylase	AK170871|Pcx|18563|pyruvate carboxylase	AK148328|Pcx|18563|pyruvate carboxylase	BC055030|Pcx|18563|pyruvate carboxylase	AK128927|Pcx|18563|pyruvate carboxylase	AK172320|Pcx|18563|pyruvate carboxylase
mm9_v1_chr3_+_82162037_82162075	1.97201	PAX2.p2	AK162555|Mtap9|213582|microtubule-associated protein 9
mm9_v1_chr10_+_59568976_59569004	1.96429	PAX2.p2	AJ278999|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	BC057324|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	NM_052994|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm9_v1_chr10_+_41607235_41607307	1.94886	PAX2.p2	NM_001013370|Sesn1|140742|sestrin 1	BC055753|Sesn1|140742|sestrin 1	AK160083|Sesn1|140742|sestrin 1	AK159531|Sesn1|140742|sestrin 1
mm9_v1_chr2_-_24618566_24618692	1.94857	PAX2.p2	AF042317|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_001042528|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_007579|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	U04999|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm9_v1_chr17_-_90487479_90487653	1.92571	PAX2.p2	AK032032|Nrxn1|18189|neurexin I
mm9_v1_chr3_-_107320881_107320937	1.89249	PAX2.p2	AK163113|Slc6a17|229706|solute carrier family 6 (neurotransmitter transporter), member 17	AY155578|Slc6a17|229706|solute carrier family 6 (neurotransmitter transporter), member 17	NM_172271|Slc6a17|229706|solute carrier family 6 (neurotransmitter transporter), member 17
mm9_v1_chr19_+_26681759_26681957	1.88827	PAX2.p2	AK147322|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr11_+_84771242_84771341	1.88588	PAX2.p2	NM_007607|Car4|12351|carbonic anhydrase 4	AK154754|Car4|12351|carbonic anhydrase 4	AK165399|Car4|12351|carbonic anhydrase 4	BC012704|Car4|12351|carbonic anhydrase 4
mm9_v1_chr19_+_45122281_45122364	1.8806	PAX2.p2	AK154274|Sfxn3|94280|sideroflexin 3	AF325262|Sfxn3|94280|sideroflexin 3	AK089985|Sfxn3|94280|sideroflexin 3	AK184595|Sfxn3|94280|sideroflexin 3	AK206211|Sfxn3|94280|sideroflexin 3	AK034514|Sfxn3|94280|sideroflexin 3
mm9_v1_chr15_+_54402914_54402981	1.86827	PAX2.p2	NM_178920|Mal2|105853|mal, T-cell differentiation protein 2
mm9_v1_chr15_+_79921725_79921855	1.84813	PAX2.p2	BC138728|Syngr1|20972|synaptogyrin 1	BC138729|Syngr1|20972|synaptogyrin 1	NM_009303|Syngr1|20972|synaptogyrin 1	NM_207708|Syngr1|20972|synaptogyrin 1	AK044007|Syngr1|20972|synaptogyrin 1	AJ002306|Syngr1|20972|synaptogyrin 1	AK156134|Syngr1|20972|synaptogyrin 1	AK002972|Syngr1|20972|synaptogyrin 1	AK010442|Syngr1|20972|synaptogyrin 1	AK153096|Syngr1|20972|synaptogyrin 1	AK153187|Syngr1|20972|synaptogyrin 1	BC048172|Syngr1|20972|synaptogyrin 1	AK194549|Syngr1|20972|synaptogyrin 1
mm9_v1_chr16_+_81200971_81201083	1.83639	PAX2.p2	AK132363|Ncam2|17968|neural cell adhesion molecule 2	AF001286|Ncam2|17968|neural cell adhesion molecule 2	AF001287|Ncam2|17968|neural cell adhesion molecule 2	AF016619|Ncam2|17968|neural cell adhesion molecule 2	BC119027|Ncam2|17968|neural cell adhesion molecule 2	BC119029|Ncam2|17968|neural cell adhesion molecule 2
mm9_v1_chr8_+_113245378_113245384	1.79622	PAX2.p2	BC060632|Mtss1l|244654|metastasis suppressor 1-like	NM_198625|Mtss1l|244654|metastasis suppressor 1-like
mm9_v1_chr3_-_80606641_80606686	1.76308	PAX2.p2	AK044574|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK134572|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK086614|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK043490|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK141525|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr17_-_27076365_27076517	1.73713	PAX2.p2	AK007580|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK007912|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK145185|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC024422|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC028531|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	NM_026307|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK003381|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	NM_026948|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK003647|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK004197|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK159336|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK002828|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK012608|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)
mm9_v1_chr12_+_88288287_88288431	1.71555	PAX2.p2	NM_173735|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	AK165964|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	AK154476|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	BC026384|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	AK122546|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	AK160643|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene
mm9_v1_chr2_+_121121189_121121220	1.70585	PAX2.p2	NM_001173506|Mtap1a|17754|microtubule-associated protein 1 A	AF182212|Mtap1a|17754|microtubule-associated protein 1 A	BC028853|Mtap1a|17754|microtubule-associated protein 1 A	AK160546|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr11_-_30549383_30549455	1.68669	PAX2.p2	BC027642|Acyp2|75572|acylphosphatase 2, muscle type	AK009134|Acyp2|75572|acylphosphatase 2, muscle type	NM_029344|Acyp2|75572|acylphosphatase 2, muscle type	AK046238|Acyp2|75572|acylphosphatase 2, muscle type
mm9_v1_chr9_+_45820886_45820906	1.67235	PAX2.p2	NM_027498|Sik3|70661|SIK family kinase 3
mm9_v1_chr19_+_12040311_12040373	1.667	PAX2.p2	NM_001033174|Osbp|76303|oxysterol binding protein
mm9_v1_chr4_-_147412872_147412910	1.66674	PAX2.p2	NM_011929|Clcn6|26372|chloride channel 6
mm9_v1_chr8_+_13159112_13159277	1.6421	PAX2.p2	NM_010684|Lamp1|16783|lysosomal-associated membrane protein 1	BC049097|Lamp1|16783|lysosomal-associated membrane protein 1	AY069968|Lamp1|16783|lysosomal-associated membrane protein 1	AK172007|Lamp1|16783|lysosomal-associated membrane protein 1	AK159096|Lamp1|16783|lysosomal-associated membrane protein 1	AK004637|Lamp1|16783|lysosomal-associated membrane protein 1
mm9_v1_chr6_+_147995935_147995985	1.64206	PAX2.p2	AK043388|Far2|330450|fatty acyl CoA reductase 2	AK043589|Far2|330450|fatty acyl CoA reductase 2	AK137298|Far2|330450|fatty acyl CoA reductase 2	NM_178797|Far2|330450|fatty acyl CoA reductase 2	BC055759|Far2|330450|fatty acyl CoA reductase 2	AK161201|Far2|330450|fatty acyl CoA reductase 2	AK038584|Far2|330450|fatty acyl CoA reductase 2
mm9_v1_chr13_+_58909168_58909217	1.63365	PAX2.p2	NM_001025074|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2	X17647|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr3_-_30868320_30868353	1.62946	PAX2.p2	BC132533|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145123|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145124|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AJ414610|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK037348|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK087339|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166208|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166296|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165954|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165955|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165956|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_153421|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr9_-_103664100_103664222	1.6252	PAX2.p2	BC052085|Tmem108|81907|transmembrane protein 108	AK077586|Tmem108|81907|transmembrane protein 108	AK044989|Tmem108|81907|transmembrane protein 108	AK047474|Tmem108|81907|transmembrane protein 108	AK086266|Tmem108|81907|transmembrane protein 108	AK141589|Tmem108|81907|transmembrane protein 108	AK052330|Tmem108|81907|transmembrane protein 108	NM_178638|Tmem108|81907|transmembrane protein 108
mm9_v1_chr9_-_97933599_97933653	1.61447	PAX2.p2	AK220500|Clstn2|64085|calsyntenin 2
mm9_v1_chr11_-_96805092_96805165	1.60969	PAX2.p2	AK154443|Pnpo|103711|pyridoxine 5'-phosphate oxidase
mm9_v1_chr3_-_151856766_151856837	1.60741	PAX2.p2	BC017161|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_025926|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr3_-_80606500_80606592	1.60635	PAX2.p2	BC066193|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	X57498|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	BC048248|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr14_-_16271386_16271500	1.60207	PAX2.p2	AK043406|Lrrc3b|218763|leucine rich repeat containing 3B	NM_146052|Lrrc3b|218763|leucine rich repeat containing 3B
mm9_v1_chr7_+_54305973_54306101	1.58102	PAX2.p2	AK007864|Tmem86a|67893|transmembrane protein 86A	NM_026436|Tmem86a|67893|transmembrane protein 86A	AK075589|Tmem86a|67893|transmembrane protein 86A	BC056619|Tmem86a|67893|transmembrane protein 86A
mm9_v1_chr3_-_117063090_117063169	1.56791	PAX2.p2	AK079635|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr17_+_35226172_35226253	1.56558	PAX2.p2	BC029114|Abhd16a|193742|abhydrolase domain containing 16A	NM_178592|Abhd16a|193742|abhydrolase domain containing 16A
mm9_v1_chr10_-_13588578_13588812	1.56209	PAX2.p2	AK008210|Aig1|66253|androgen-induced 1	NM_025446|Aig1|66253|androgen-induced 1	AK162306|Aig1|66253|androgen-induced 1	AK005332|Aig1|66253|androgen-induced 1	AK084050|Aig1|66253|androgen-induced 1	BC035305|Aig1|66253|androgen-induced 1
mm9_v1_chrX_+_133200913_133200976	1.55247	PAX2.p2	NM_001029978|Tceal3|594844|transcription elongation factor A (SII)-like 3	AK158996|Tceal3|594844|transcription elongation factor A (SII)-like 3
mm9_v1_chr8_+_13159279_13159395	1.55155	PAX2.p2	M25244|Lamp1|16783|lysosomal-associated membrane protein 1	AK159376|Lamp1|16783|lysosomal-associated membrane protein 1	M32015|Lamp1|16783|lysosomal-associated membrane protein 1
mm9_v1_chr16_-_10313924_10313944	1.54811	PAX2.p2	AF083876|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr3_+_82162091_82162153	1.53093	PAX2.p2	AK135823|Mtap9|213582|microtubule-associated protein 9	BC087935|Mtap9|213582|microtubule-associated protein 9	AK147287|Mtap9|213582|microtubule-associated protein 9	AK147416|Mtap9|213582|microtubule-associated protein 9	BC061216|Mtap9|213582|microtubule-associated protein 9	AK030527|Mtap9|213582|microtubule-associated protein 9
mm9_v1_chr1_-_94998418_94998474	1.52249	PAX2.p2	BC045161|Kif1a|16560|kinesin family member 1A	BC054538|Kif1a|16560|kinesin family member 1A	BC062891|Kif1a|16560|kinesin family member 1A	NM_001110315|Kif1a|16560|kinesin family member 1A	NM_008440|Kif1a|16560|kinesin family member 1A
mm9_v1_chr17_-_67703726_67703889	1.51856	PAX2.p2	X58287|Ptprm|19274|protein tyrosine phosphatase, receptor type, M	BC058614|Ptprm|19274|protein tyrosine phosphatase, receptor type, M	NM_008984|Ptprm|19274|protein tyrosine phosphatase, receptor type, M
mm9_v1_chr3_-_117063317_117063389	1.51831	PAX2.p2	BC082323|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	BC137701|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	BC137702|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AK129149|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr17_+_44215761_44215847	1.5159	PAX2.p2	NM_032003|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	NM_001168620|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	AK032341|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	AF233377|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	BC089320|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5
mm9_v1_chr19_-_57082666_57082717	1.51219	PAX2.p2	BC031515|Afap1l2|226250|actin filament associated protein 1-like 2	AK220430|Afap1l2|226250|actin filament associated protein 1-like 2	AK158196|Afap1l2|226250|actin filament associated protein 1-like 2	AK087809|Afap1l2|226250|actin filament associated protein 1-like 2	AK148682|Afap1l2|226250|actin filament associated protein 1-like 2	AK087449|Afap1l2|226250|actin filament associated protein 1-like 2	AK171853|Afap1l2|226250|actin filament associated protein 1-like 2	AK048649|Afap1l2|226250|actin filament associated protein 1-like 2	AK053222|Afap1l2|226250|actin filament associated protein 1-like 2
mm9_v1_chr9_-_88376937_88377419	1.50709	PAX2.p2	BC080309|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC108363|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK083398|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK077588|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC050079|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC055863|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK076026|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AB035725|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK034845|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC041148|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC058807|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_019666|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_019796|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein
mm9_v1_chr4_+_129662110_129662138	1.50626	PAX2.p2	AK147485|Bai2|230775|brain-specific angiogenesis inhibitor 2
mm9_v1_chr1_+_24685377_24685468	1.50624	PAX2.p2	NM_026719|Lmbrd1|68421|LMBR1 domain containing 1	BC039053|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr7_+_108496574_108496658	1.50376	PAX2.p2	AK172210|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	NM_001040111|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	AK137455|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	AK140646|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm9_v1_chr4_-_151851574_151851597	1.49768	PAX2.p2	BC039178|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2	NM_010598|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2	U31908|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm9_v1_chr2_-_152777135_152777317	1.48317	PAX2.p2	BC116841|Dusp15|252864|dual specificity phosphatase-like 15	BC116843|Dusp15|252864|dual specificity phosphatase-like 15	BC144711|Dusp15|252864|dual specificity phosphatase-like 15	AF357887|Dusp15|252864|dual specificity phosphatase-like 15	NM_145744|Dusp15|252864|dual specificity phosphatase-like 15	NM_001159376|Dusp15|252864|dual specificity phosphatase-like 15
mm9_v1_chr5_+_35399712_35399732	1.47323	PAX2.p2	AK044445|Dok7|231134|docking protein 7	NM_172708|Dok7|231134|docking protein 7
mm9_v1_chr19_+_12040391_12040437	1.46501	PAX2.p2	BC107327|Osbp|76303|oxysterol binding protein	BC107328|Osbp|76303|oxysterol binding protein
mm9_v1_chr16_-_44139087_44139164	1.45851	PAX2.p2	AK140873|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	BC038392|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK150742|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK166857|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK149833|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK153403|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK154869|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK160792|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK170721|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	NM_007508|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A
mm9_v1_chr17_-_24306262_24306418	1.42355	PAX2.p2	BC132267|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC132611|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC126881|Atp6v0c-ps2|100039636|ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2	BC099475|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC050939|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK146159|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK170346|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC083129|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK002871|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK028239|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	M64298|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	NM_009729|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK002570|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK014361|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C
mm9_v1_chr9_+_59598963_59599005	1.4143	PAX2.p2	NM_173018|Myo9a|270163|myosin IXa	AK048681|Myo9a|270163|myosin IXa
mm9_v1_chr6_+_48487648_48487719	1.41412	PAX2.p2	AK077313|Atp6v0e2|76252|ATPase, H+ transporting, lysosomal V0 subunit E2	AK002260|Atp6v0e2|76252|ATPase, H+ transporting, lysosomal V0 subunit E2
mm9_v1_chr9_-_86589782_86589994	1.41176	PAX2.p2	M26756|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC094028|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC080660|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC003287|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK004980|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	AK077968|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	J02652|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	BC011081|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic	NM_008615|Me1|17436|malic enzyme 1, NADP(+)-dependent, cytosolic
mm9_v1_chr11_-_107776248_107776368	1.41156	PAX2.p2	AK080762|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5	AK032260|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5	AK034065|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5
mm9_v1_chr1_-_94998392_94998412	1.41122	PAX2.p2	AK138237|Kif1a|16560|kinesin family member 1A	BC034863|Kif1a|16560|kinesin family member 1A	D29951|Kif1a|16560|kinesin family member 1A	AK147640|Kif1a|16560|kinesin family member 1A
mm9_v1_chr1_+_81073778_81073898	1.41084	PAX2.p2	AK034747|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene	BC082310|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene	NM_172849|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene	AK137094|9430031J16Rik|241134|RIKEN cDNA 9430031J16 gene
mm9_v1_chr18_+_35020859_35020865	1.39676	PAX2.p2	M38174|Egr1|13653|early growth response 1	AK037837|Egr1|13653|early growth response 1	AK040925|Egr1|13653|early growth response 1	AK146322|Egr1|13653|early growth response 1	NM_007913|Egr1|13653|early growth response 1	AK145198|Egr1|13653|early growth response 1
mm9_v1_chr9_-_89517823_89517962	1.39142	PAX2.p2	AF529169|AF529169|209743|cDNA sequence AF529169	NM_153509|AF529169|209743|cDNA sequence AF529169	AK035830|AF529169|209743|cDNA sequence AF529169
mm9_v1_chr3_-_58495986_58496041	1.38967	PAX2.p2	Z19581|Siah2|20439|seven in absentia 2
mm9_v1_chr2_-_167318313_167318390	1.38793	PAX2.p2	AK051741|Spata2|263876|spermatogenesis associated 2	AK144826|Spata2|263876|spermatogenesis associated 2	AK171240|Spata2|263876|spermatogenesis associated 2	AK171664|Spata2|263876|spermatogenesis associated 2	AK171852|Spata2|263876|spermatogenesis associated 2	BC034597|Spata2|263876|spermatogenesis associated 2	AK156188|Spata2|263876|spermatogenesis associated 2	AK170356|Spata2|263876|spermatogenesis associated 2	AK162743|Spata2|263876|spermatogenesis associated 2	NM_170756|Spata2|263876|spermatogenesis associated 2
mm9_v1_chr1_-_33964439_33964706	1.38712	PAX2.p2	BC057378|Bend6|320705|BEN domain containing 6	NM_177235|Bend6|320705|BEN domain containing 6	AK134655|Bend6|320705|BEN domain containing 6	AK044633|Bend6|320705|BEN domain containing 6	BC042757|Bend6|320705|BEN domain containing 6
mm9_v1_chr11_+_98209978_98210141	1.38514	PAX2.p2	BC026568|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_144828|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC011122|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B
mm9_v1_chr17_-_91492065_91492142	1.37375	PAX2.p2	BC079893|Nrxn1|18189|neurexin I	AK005349|Nrxn1|18189|neurexin I	AK139280|Nrxn1|18189|neurexin I	AK163484|Nrxn1|18189|neurexin I	AK037724|Nrxn1|18189|neurexin I	AB093249|Nrxn1|18189|neurexin I	NM_020252|Nrxn1|18189|neurexin I	NM_177284|Nrxn1|18189|neurexin I	AK137407|Nrxn1|18189|neurexin I
mm9_v1_chrX_+_20425667_20425723	1.37276	PAX2.p2	NM_001159645|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	NM_009703|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK169757|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK133797|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK163567|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK039044|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK085823|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK135358|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	BC004757|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr7_-_30303557_30303638	1.36955	PAX2.p2	AK172968|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3	AK041920|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3
mm9_v1_chr9_+_107242932_107243058	1.36403	PAX2.p2	AK043338|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	AK085251|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	AK032501|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	AK032358|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	NM_175486|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	BC115775|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	BC116708|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene
mm9_v1_chr1_-_177422630_177422675	1.35881	PAX2.p2	BC051133|Rgs7|24012|regulator of G protein signaling 7	NM_001199003|Rgs7|24012|regulator of G protein signaling 7	NM_011880|Rgs7|24012|regulator of G protein signaling 7
mm9_v1_chr5_-_151397024_151397110	1.3576	PAX2.p2	AK042145|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK046116|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK138666|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK155341|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK131647|N4bp2l1|100637|NEDD4 binding protein 2-like 1	NM_133898|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK010587|N4bp2l1|100637|NEDD4 binding protein 2-like 1
mm9_v1_chr5_-_124482223_124482295	1.33976	PAX2.p2	AK082658|Vps37b|330192|vacuolar protein sorting 37B (yeast)	AK172114|Vps37b|330192|vacuolar protein sorting 37B (yeast)	AK172337|Vps37b|330192|vacuolar protein sorting 37B (yeast)	AK149893|Vps37b|330192|vacuolar protein sorting 37B (yeast)	AK166359|Vps37b|330192|vacuolar protein sorting 37B (yeast)	BC026744|Vps37b|330192|vacuolar protein sorting 37B (yeast)	NM_177876|Vps37b|330192|vacuolar protein sorting 37B (yeast)
mm9_v1_chr10_+_57514349_57514589	1.33738	PAX2.p2	NM_020561|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	Y08135|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK002455|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK152282|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	BC139288|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	BC139289|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK151683|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A
mm9_v1_chr16_+_45158943_45159161	1.33156	PAX2.p2	AK078877|Atg3|67841|autophagy-related 3 (yeast)	BC010809|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr18_+_36440748_36440822	1.31867	PAX2.p2	NM_008989|Pura|19290|purine rich element binding protein A	U02098|Pura|19290|purine rich element binding protein A
mm9_v1_chr8_-_109620286_109620323	1.31294	PAX2.p2	AF003000|Terf2|21750|telomeric repeat binding factor 2
mm9_v1_chr6_+_90412566_90412633	1.30553	PAX2.p2	AK138824|Klf15|66277|Kruppel-like factor 15	AK142618|Klf15|66277|Kruppel-like factor 15	AK009739|Klf15|66277|Kruppel-like factor 15	NM_023184|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr2_-_113839354_113839354	1.30041	PAX2.p2	BC058595|Gjd2|14617|gap junction protein, delta 2	NM_010290|Gjd2|14617|gap junction protein, delta 2
mm9_v1_chr7_-_28338127_28338176	1.29785	PAX2.p2	BC068170|Pld3|18807|phospholipase D family, member 3	AF026124|Pld3|18807|phospholipase D family, member 3	NM_011116|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr13_+_58909236_58909250	1.29707	PAX2.p2	AK028827|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr5_-_118694869_118695124	1.28527	PAX2.p2	AK046850|Rnft2|269695|ring finger protein, transmembrane 2	NM_172998|Rnft2|269695|ring finger protein, transmembrane 2	BC057302|Rnft2|269695|ring finger protein, transmembrane 2	AK148930|Rnft2|269695|ring finger protein, transmembrane 2	NM_001109902|Rnft2|269695|ring finger protein, transmembrane 2	AK090256|Rnft2|269695|ring finger protein, transmembrane 2
mm9_v1_chr17_+_81343933_81344010	1.28496	PAX2.p2	AK013110|Tmem178|68027|transmembrane protein 178	AK014196|Tmem178|68027|transmembrane protein 178	NM_026516|Tmem178|68027|transmembrane protein 178
mm9_v1_chr1_-_93355838_93355884	1.27659	PAX2.p2	AK044658|Per2|18627|period homolog 2 (Drosophila)	AF035830|Per2|18627|period homolog 2 (Drosophila)	AK122253|Per2|18627|period homolog 2 (Drosophila)	AF036893|Per2|18627|period homolog 2 (Drosophila)
mm9_v1_chr12_-_77470450_77470546	1.25129	PAX2.p2	NM_001172104|Zbtb25|109929|zinc finger and BTB domain containing 25	AK137486|Zbtb25|109929|zinc finger and BTB domain containing 25	NM_028356|Zbtb25|109929|zinc finger and BTB domain containing 25
mm9_v1_chr11_-_95936914_95937007	1.25017	PAX2.p2	BC003854|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK008191|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK009883|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	NM_001161419|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK011432|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK008998|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK011054|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK167884|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK010868|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	NM_007506|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)
mm9_v1_chr2_+_25284190_25284289	1.24757	PAX2.p2	AK169438|Abca2|11305|ATP-binding cassette, sub-family A (ABC1), member 2	NM_007379|Abca2|11305|ATP-binding cassette, sub-family A (ABC1), member 2	X75927|Abca2|11305|ATP-binding cassette, sub-family A (ABC1), member 2
mm9_v1_chr2_+_25733302_25733389	1.23353	PAX2.p2	BC141190|Kcnt1|227632|potassium channel, subfamily T, member 1	BC171963|Kcnt1|227632|potassium channel, subfamily T, member 1	AK086119|Kcnt1|227632|potassium channel, subfamily T, member 1	NM_175462|Kcnt1|227632|potassium channel, subfamily T, member 1	AK147625|Kcnt1|227632|potassium channel, subfamily T, member 1
mm9_v1_chr11_-_5965626_5965708	1.22513	PAX2.p2	AK048845|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta
mm9_v1_chr4_-_45097427_45097496	1.21537	PAX2.p2	AK153358|Fbxo10|269529|F-box protein 10	BC054731|Fbxo10|269529|F-box protein 10	AK150292|Fbxo10|269529|F-box protein 10	AK142389|Fbxo10|269529|F-box protein 10	NM_001024142|Fbxo10|269529|F-box protein 10
mm9_v1_chr18_+_36441115_36441157	1.21364	PAX2.p2	AK075821|Pura|19290|purine rich element binding protein A
mm9_v1_chr11_-_118902219_118902253	1.21	PAX2.p2	AF180370|Cbx8|30951|chromobox homolog 8 (Drosophila Pc class)	NM_013926|Cbx8|30951|chromobox homolog 8 (Drosophila Pc class)
mm9_v1_chr18_+_23468655_23468725	1.19719	PAX2.p2	X95227|Dtna|13527|dystrobrevin alpha
mm9_v1_chr9_-_29770699_29770842	1.19663	PAX2.p2	AK138263|Ntm|235106|neurotrimin	AK045973|Ntm|235106|neurotrimin	AK046377|Ntm|235106|neurotrimin	NM_172290|Ntm|235106|neurotrimin	AK042854|Ntm|235106|neurotrimin	AK140516|Ntm|235106|neurotrimin	AK020998|Ntm|235106|neurotrimin	AK020745|Ntm|235106|neurotrimin
mm9_v1_chr13_+_118391126_118391233	1.19655	PAX2.p2	AK158322|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1	NM_010408|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1
mm9_v1_chr11_-_116060026_116060114	1.19255	PAX2.p2	BC054727|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AK051539|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AB034914|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AK040566|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AK128941|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	AF006688|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl
mm9_v1_chr11_-_115158717_115158977	1.18754	PAX2.p2	BC044804|Fads6|328035|fatty acid desaturase domain family, member 6	BC132041|Fads6|328035|fatty acid desaturase domain family, member 6	BC132067|Fads6|328035|fatty acid desaturase domain family, member 6	AB087503|Fads6|328035|fatty acid desaturase domain family, member 6	NM_178035|Fads6|328035|fatty acid desaturase domain family, member 6	BC050213|Fads6|328035|fatty acid desaturase domain family, member 6
mm9_v1_chr19_-_40588193_40588218	1.18314	PAX2.p2	AK122487|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr19_-_40588255_40588287	1.18081	PAX2.p2	AK166943|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr11_+_6963421_6963491	1.1806	PAX2.p2	NM_009622|Adcy1|432530|adenylate cyclase 1
mm9_v1_chr15_+_82105647_82105870	1.18044	PAX2.p2	AK169916|Sept3|24050|septin 3	AK164861|Sept3|24050|septin 3	AK046722|Sept3|24050|septin 3	AK030668|Sept3|24050|septin 3	AK141915|Sept3|24050|septin 3
mm9_v1_chr5_-_24348240_24348246	1.17457	PAX2.p2	AK158213|Rheb|19744|Ras homolog enriched in brain
mm9_v1_chr1_+_154802091_154802137	1.16574	PAX2.p2	AK084041|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	AK083532|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr16_-_85080107_85080121	1.16574	PAX2.p2	
mm9_v1_chr2_-_154384574_154384627	1.16553	PAX2.p2	AK044296|Necab3|56846|N-terminal EF-hand calcium binding protein 3	AK013520|Necab3|56846|N-terminal EF-hand calcium binding protein 3	AK158225|Necab3|56846|N-terminal EF-hand calcium binding protein 3	NM_021546|Necab3|56846|N-terminal EF-hand calcium binding protein 3
mm9_v1_chr7_+_134985435_134985552	1.16537	PAX2.p2	BC005791|Stx4a|20909|syntaxin 4A (placental)	U76832|Stx4a|20909|syntaxin 4A (placental)
mm9_v1_chr1_+_154802144_154802177	1.16437	PAX2.p2	AK129155|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr3_+_151100845_151100914	1.16319	PAX2.p2	NM_133222|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	AF385682|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	BC017134|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1
mm9_v1_chr14_+_56179739_56179780	1.15464	PAX2.p2	NM_001199009|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK150183|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr1_-_188529867_188529872	1.14753	PAX2.p2	X57413|Tgfb2|21808|transforming growth factor, beta 2	NM_009367|Tgfb2|21808|transforming growth factor, beta 2
mm9_v1_chr16_-_10314010_10314073	1.14725	PAX2.p2	AK076194|Emp2|13731|epithelial membrane protein 2	AK077260|Emp2|13731|epithelial membrane protein 2	NM_007929|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr1_+_75139300_75139429	1.14166	PAX2.p2	AK034667|Fam134a|227298|family with sequence similarity 134, member A	NM_170755|Fam134a|227298|family with sequence similarity 134, member A	AK172093|Fam134a|227298|family with sequence similarity 134, member A	BC070406|Fam134a|227298|family with sequence similarity 134, member A	AK165957|Fam134a|227298|family with sequence similarity 134, member A	AK160400|Fam134a|227298|family with sequence similarity 134, member A
mm9_v1_chr15_+_66409094_66409201	1.13906	PAX2.p2	AK047044|Phf20l1|239510|PHD finger protein 20-like 1	AK032638|Phf20l1|239510|PHD finger protein 20-like 1	NM_001081409|Phf20l1|239510|PHD finger protein 20-like 1	BC082777|Phf20l1|239510|PHD finger protein 20-like 1	BC052212|Phf20l1|239510|PHD finger protein 20-like 1	BC061492|Phf20l1|239510|PHD finger protein 20-like 1
mm9_v1_chr10_+_105907394_105907408	1.13559	PAX2.p2	BC065133|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	EU568870|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	NM_177373|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK030621|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	AK220491|Ppfia2|327814|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm9_v1_chr19_-_40588219_40588234	1.13528	PAX2.p2	AK087553|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_178362|Sorbs1|20411|sorbin and SH3 domain containing 1	BC012703|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr4_+_130378728_130379372	1.13368	PAX2.p2	AK206079|Sdc3|20970|syndecan 3	AK180657|Sdc3|20970|syndecan 3	BC059031|Sdc3|20970|syndecan 3	AK087492|Sdc3|20970|syndecan 3	AK194562|Sdc3|20970|syndecan 3
mm9_v1_chr3_+_136598184_136598389	1.12049	PAX2.p2	AK218972|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK179617|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK145309|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr17_+_35958628_35958663	1.10962	PAX2.p2	AK051003|Ier3|15937|immediate early response 3	AK170477|Ier3|15937|immediate early response 3	AK003466|Ier3|15937|immediate early response 3	BC006950|Ier3|15937|immediate early response 3	NM_133662|Ier3|15937|immediate early response 3	CT010247|Ier3|15937|immediate early response 3	CT010271|Ier3|15937|immediate early response 3
mm9_v1_chr15_+_99223622_99223695	1.1096	PAX2.p2	NM_001171035|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr4_-_53172748_53172872	1.10049	PAX2.p2	AK051920|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1	NM_013454|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1
mm9_v1_chr2_+_18594027_18594125	1.0977	PAX2.p2	AK145999|Commd3|12238|COMM domain containing 3	AK145955|Commd3|12238|COMM domain containing 3	BC038077|Commd3|12238|COMM domain containing 3	BC048815|Commd3|12238|COMM domain containing 3	AK007318|Commd3|12238|COMM domain containing 3	AK041634|Commd3|12238|COMM domain containing 3	NM_147778|Commd3|12238|COMM domain containing 3
mm9_v1_chr10_-_79602040_79602141	1.0931	PAX2.p2	AK137009|Dos|100503659|downstream of Stk11
mm9_v1_chr18_+_64425037_64425080	1.0901	PAX2.p2	AK134678|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	BC075645|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	AK133780|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	X80502|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm9_v1_chr4_-_154719834_154719909	1.08751	PAX2.p2	AB110830|Prkcz|18762|protein kinase C, zeta	AK042562|Prkcz|18762|protein kinase C, zeta	AK049959|Prkcz|18762|protein kinase C, zeta	NM_001039079|Prkcz|18762|protein kinase C, zeta	BC072590|Prkcz|18762|protein kinase C, zeta
mm9_v1_chr11_+_119129350_119129459	1.07204	PAX2.p2	AK140042|Gaa|14387|glucosidase, alpha, acid	BC010210|Gaa|14387|glucosidase, alpha, acid	AK207669|Gaa|14387|glucosidase, alpha, acid	AK150970|Gaa|14387|glucosidase, alpha, acid	AK139333|Gaa|14387|glucosidase, alpha, acid	AK197627|Gaa|14387|glucosidase, alpha, acid	AK179414|Gaa|14387|glucosidase, alpha, acid
mm9_v1_chr17_+_37187984_37188086	1.06699	PAX2.p2	AK038844|Gabbr1|54393|gamma-aminobutyric acid (GABA) B receptor, 1
mm9_v1_chr2_+_166631011_166631132	1.05506	PAX2.p2	AK087574|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	NM_001085495|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	AK087920|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	BC158012|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	AK153722|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm9_v1_chr14_+_45839391_45839393	1.04298	PAX2.p2	AK082691|Gpr137c|70713|G protein-coupled receptor 137C	NM_027518|Gpr137c|70713|G protein-coupled receptor 137C	AK018183|Gpr137c|70713|G protein-coupled receptor 137C
mm9_v1_chr11_-_5965555_5965582	1.04052	PAX2.p2	BC024803|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	X63615|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	AK163698|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta
mm9_v1_chr12_-_80273320_80273473	1.03034	PAX2.p2	AF035821|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AF035208|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC009810|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC080204|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC002290|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK160624|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK002289|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	NM_016800|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog
mm9_v1_chr19_+_45005658_45005755	1.02687	PAX2.p2	BC150999|Fam178a|226151|family with sequence similarity 178, member A	BC157937|Fam178a|226151|family with sequence similarity 178, member A	BC172097|Fam178a|226151|family with sequence similarity 178, member A
mm9_v1_chr17_+_46390828_46391138	1.02563	PAX2.p2	AK134769|Gm88|224813|predicted gene 88	NM_001111142|Gm88|224813|predicted gene 88	BC147714|Gm88|224813|predicted gene 88	BC172136|Gm88|224813|predicted gene 88
mm9_v1_chr3_+_82161952_82161996	1.02404	PAX2.p2	AK138540|Mtap9|213582|microtubule-associated protein 9	AK038737|Mtap9|213582|microtubule-associated protein 9	NM_001081230|Mtap9|213582|microtubule-associated protein 9
mm9_v1_chr5_+_144383313_144383461	1.01931	PAX2.p2	NM_011182|Cyth3|19159|cytohesin 3	AK142407|Cyth3|19159|cytohesin 3	AK220565|Cyth3|19159|cytohesin 3	AK159229|Cyth3|19159|cytohesin 3	BC035296|Cyth3|19159|cytohesin 3	AK036191|Cyth3|19159|cytohesin 3	AK168566|Cyth3|19159|cytohesin 3	AF084221|Cyth3|19159|cytohesin 3	AB013470|Cyth3|19159|cytohesin 3
mm9_v1_chr10_-_126632763_126632797	1.01856	PAX2.p2	AK205953|Dtx3|80904|deltex 3 homolog (Drosophila)	BC099687|Dtx3|80904|deltex 3 homolog (Drosophila)	NM_030714|Dtx3|80904|deltex 3 homolog (Drosophila)	BC048434|Dtx3|80904|deltex 3 homolog (Drosophila)	AK148444|Dtx3|80904|deltex 3 homolog (Drosophila)
mm9_v1_chr9_+_64659238_64659350	1.01413	PAX2.p2	AK158279|Dennd4a|102442|DENN/MADD domain containing 4A	AK158840|Dennd4a|102442|DENN/MADD domain containing 4A	AK051202|Dennd4a|102442|DENN/MADD domain containing 4A	AK089365|Dennd4a|102442|DENN/MADD domain containing 4A	AK158187|Dennd4a|102442|DENN/MADD domain containing 4A	BC172087|Dennd4a|102442|DENN/MADD domain containing 4A
mm9_v1_chr1_-_53841997_53842058	1.01303	PAX2.p2	AK029551|Stk17b|98267|serine/threonine kinase 17b (apoptosis-inducing)	AK165291|Stk17b|98267|serine/threonine kinase 17b (apoptosis-inducing)	AY092028|Stk17b|98267|serine/threonine kinase 17b (apoptosis-inducing)	AK153108|Stk17b|98267|serine/threonine kinase 17b (apoptosis-inducing)	BC006579|Stk17b|98267|serine/threonine kinase 17b (apoptosis-inducing)	AK035693|Stk17b|98267|serine/threonine kinase 17b (apoptosis-inducing)	AK076932|Stk17b|98267|serine/threonine kinase 17b (apoptosis-inducing)	AK083332|Stk17b|98267|serine/threonine kinase 17b (apoptosis-inducing)	NM_133810|Stk17b|98267|serine/threonine kinase 17b (apoptosis-inducing)
mm9_v1_chr2_-_130249983_130250049	1.00589	PAX2.p2	AK081584|Fam113a|319513|family with sequence similarity 113, member A	AK032762|Fam113a|319513|family with sequence similarity 113, member A	AK045248|Fam113a|319513|family with sequence similarity 113, member A	AK044590|Fam113a|319513|family with sequence similarity 113, member A	AK027964|Fam113a|319513|family with sequence similarity 113, member A	AK032354|Fam113a|319513|family with sequence similarity 113, member A	AK077745|Fam113a|319513|family with sequence similarity 113, member A	AK161998|Fam113a|319513|family with sequence similarity 113, member A	AK041939|Fam113a|319513|family with sequence similarity 113, member A	AK085613|Fam113a|319513|family with sequence similarity 113, member A	NM_178762|Fam113a|319513|family with sequence similarity 113, member A	AK079521|Fam113a|319513|family with sequence similarity 113, member A
mm9_v1_chr5_-_123582394_123582469	1.00261	PAX2.p2	AK038837|Rhof|23912|ras homolog gene family, member f	AK172212|Rhof|23912|ras homolog gene family, member f	BC096597|Rhof|23912|ras homolog gene family, member f	BC132355|Rhof|23912|ras homolog gene family, member f	BC132357|Rhof|23912|ras homolog gene family, member f
mm9_v1_chr10_+_59569052_59569061	1.00148	PAX2.p2	BC060210|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm9_v1_chr9_+_45820921_45821106	0.995517	PAX2.p2	BC080688|Sik3|70661|SIK family kinase 3	BC063268|Sik3|70661|SIK family kinase 3
mm9_v1_chr6_+_72305440_72305522	0.995082	PAX2.p2	NM_144916|Tmem150a|232086|transmembrane protein 150A	BC028825|Tmem150a|232086|transmembrane protein 150A
mm9_v1_chr19_-_47089605_47089678	0.993813	PAX2.p2	AK162385|Nt5c2|76952|5'-nucleotidase, cytosolic II	NM_001164363|Nt5c2|76952|5'-nucleotidase, cytosolic II
mm9_v1_chr3_-_84063605_84063646	0.991793	PAX2.p2	AK147275|Trim2|80890|tripartite motif-containing 2	AK079415|Trim2|80890|tripartite motif-containing 2
mm9_v1_chr3_-_87804277_87804315	0.982772	PAX2.p2	NM_001109758|Bcan|12032|brevican	NM_007529|Bcan|12032|brevican
mm9_v1_chr5_-_124053691_124053818	0.978227	PAX2.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr6_+_134870680_134870720	0.977354	PAX2.p2	AK046676|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK162146|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	U10440|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr5_-_113739711_113739807	0.97195	PAX2.p2	BC138049|Sgsm1|52850|small G protein signaling modulator 1	BC138050|Sgsm1|52850|small G protein signaling modulator 1	AK053555|Sgsm1|52850|small G protein signaling modulator 1	AK044716|Sgsm1|52850|small G protein signaling modulator 1	AK170021|Sgsm1|52850|small G protein signaling modulator 1	NM_001162965|Sgsm1|52850|small G protein signaling modulator 1	NM_172718|Sgsm1|52850|small G protein signaling modulator 1
mm9_v1_chrX_+_149574541_149574624	0.969142	PAX2.p2	BC069180|Rragb|245670|Ras-related GTP binding B
mm9_v1_chr18_-_10610261_10610307	0.969097	PAX2.p2	BC151069|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	BC151077|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	BC172153|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm9_v1_chr14_+_56179818_56179917	0.968703	PAX2.p2	BC021305|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK152395|Dcaf11|28199|DDB1 and CUL4 associated factor 11	BC037001|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr11_+_92959670_92959804	0.965288	PAX2.p2	AK012302|Car10|72605|carbonic anhydrase 10	AB080741|Car10|72605|carbonic anhydrase 10	BC066111|Car10|72605|carbonic anhydrase 10	AK038695|Car10|72605|carbonic anhydrase 10
mm9_v1_chr9_+_43875175_43875249	0.963402	PAX2.p2	AY255638|Usp2|53376|ubiquitin specific peptidase 2	AY255639|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr10_-_6979959_6980009	0.952391	PAX2.p2	BC055717|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr5_-_69732792_69732803	0.952098	PAX2.p2	AK042569|Kctd8|243043|potassium channel tetramerisation domain containing 8	AK045439|Kctd8|243043|potassium channel tetramerisation domain containing 8	AK082563|Kctd8|243043|potassium channel tetramerisation domain containing 8
mm9_v1_chr14_-_30534966_30535111	0.943428	PAX2.p2	AJ010949|Cacna2d3|12294|calcium channel, voltage-dependent, alpha2/delta subunit 3	NM_009785|Cacna2d3|12294|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm9_v1_chr19_-_40588235_40588251	0.942976	PAX2.p2	U58883|Sorbs1|20411|sorbin and SH3 domain containing 1	AK035212|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr11_-_84953442_84953491	0.941595	PAX2.p2	AK170234|Usp32|237898|ubiquitin specific peptidase 32	AK148221|Usp32|237898|ubiquitin specific peptidase 32	NM_001029934|Usp32|237898|ubiquitin specific peptidase 32
mm9_v1_chr7_+_129432585_129432762	0.940328	PAX2.p2	NM_008855|Prkcb|18751|protein kinase C, beta	AK051862|Prkcb|18751|protein kinase C, beta
mm9_v1_chr12_+_87087488_87087539	0.939604	PAX2.p2	AY260574|Mfsd7c|217721|major facilitator superfamily domain containing 7C	AY260575|Mfsd7c|217721|major facilitator superfamily domain containing 7C	AY260576|Mfsd7c|217721|major facilitator superfamily domain containing 7C	BC011209|Mfsd7c|217721|major facilitator superfamily domain containing 7C	NM_145447|Mfsd7c|217721|major facilitator superfamily domain containing 7C	AK145696|Mfsd7c|217721|major facilitator superfamily domain containing 7C
mm9_v1_chr4_+_73897782_73897907	0.938832	PAX2.p2	AK173023|Kdm4c|76804|lysine (K)-specific demethylase 4C	NM_144787|Kdm4c|76804|lysine (K)-specific demethylase 4C	AK144890|Kdm4c|76804|lysine (K)-specific demethylase 4C	AK144103|Kdm4c|76804|lysine (K)-specific demethylase 4C	AK081769|Kdm4c|76804|lysine (K)-specific demethylase 4C	BC020180|Kdm4c|76804|lysine (K)-specific demethylase 4C	AK048092|Kdm4c|76804|lysine (K)-specific demethylase 4C	AK042792|Kdm4c|76804|lysine (K)-specific demethylase 4C	AK053104|Kdm4c|76804|lysine (K)-specific demethylase 4C
mm9_v1_chr7_+_133920438_133920526	0.936408	PAX2.p2	AK003371|Ypel3|66090|yippee-like 3 (Drosophila)	NM_025347|Ypel3|66090|yippee-like 3 (Drosophila)	NM_026875|Ypel3|66090|yippee-like 3 (Drosophila)	AF523353|Ypel3|66090|yippee-like 3 (Drosophila)	AK002925|Ypel3|66090|yippee-like 3 (Drosophila)	BC009171|Ypel3|66090|yippee-like 3 (Drosophila)
mm9_v1_chr4_+_128331945_128331981	0.933137	PAX2.p2	NM_001195130|Phc2|54383|polyhomeotic-like 2 (Drosophila)
mm9_v1_chr12_-_112909656_112909823	0.932963	PAX2.p2	AK216419|Ckb|12709|creatine kinase, brain
mm9_v1_chr11_-_90252228_90252237	0.931752	PAX2.p2	NM_172563|Hlf|217082|hepatic leukemia factor
mm9_v1_chr6_+_124959207_124959358	0.92549	PAX2.p2	AK156026|Zfp384|269800|zinc finger protein 384	AK172476|Zfp384|269800|zinc finger protein 384
mm9_v1_chr16_+_45159173_45159221	0.92267	PAX2.p2	AB079386|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr15_+_99869071_99869185	0.921751	PAX2.p2	NM_001159361|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	AK147562|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm9_v1_chr19_-_36811137_36811158	0.920445	PAX2.p2	AK078735|Ppp1r3c|53412|protein phosphatase 1, regulatory (inhibitor) subunit 3C	BC052769|Ppp1r3c|53412|protein phosphatase 1, regulatory (inhibitor) subunit 3C
mm9_v1_chr4_-_151851624_151851635	0.918234	PAX2.p2	AK143166|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm9_v1_chr18_+_23468585_23468619	0.914091	PAX2.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr11_-_70501430_70501474	0.910448	PAX2.p2	AK039670|Camta2|216874|calmodulin binding transcription activator 2	BC049133|Camta2|216874|calmodulin binding transcription activator 2	BC056395|Camta2|216874|calmodulin binding transcription activator 2	AK169118|Camta2|216874|calmodulin binding transcription activator 2	AK150186|Camta2|216874|calmodulin binding transcription activator 2
mm9_v1_chr16_-_45158709_45158787	0.898005	PAX2.p2	AK030566|Slc35a5|74102|solute carrier family 35, member A5	AK003124|Slc35a5|74102|solute carrier family 35, member A5	AK052833|Slc35a5|74102|solute carrier family 35, member A5	BC011115|Slc35a5|74102|solute carrier family 35, member A5	AK085567|Slc35a5|74102|solute carrier family 35, member A5	AK033921|Slc35a5|74102|solute carrier family 35, member A5	AK170026|Slc35a5|74102|solute carrier family 35, member A5	AK034527|Slc35a5|74102|solute carrier family 35, member A5	AK150825|Slc35a5|74102|solute carrier family 35, member A5	AK151484|Slc35a5|74102|solute carrier family 35, member A5	NM_028756|Slc35a5|74102|solute carrier family 35, member A5
mm9_v1_chr19_+_6341137_6341249	0.897366	PAX2.p2	AK154164|Map4k2|26412|mitogen-activated protein kinase kinase kinase kinase 2	AK154323|Map4k2|26412|mitogen-activated protein kinase kinase kinase kinase 2	BC116286|Map4k2|26412|mitogen-activated protein kinase kinase kinase kinase 2	BC116287|Map4k2|26412|mitogen-activated protein kinase kinase kinase kinase 2	NM_009006|Map4k2|26412|mitogen-activated protein kinase kinase kinase kinase 2	U50595|Map4k2|26412|mitogen-activated protein kinase kinase kinase kinase 2
mm9_v1_chr1_+_75502181_75502246	0.895556	PAX2.p2	AK080818|Obsl1|98733|obscurin-like 1
mm9_v1_chr6_+_39542563_39542611	0.895389	PAX2.p2	AK028334|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	AK010642|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	AK019008|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	NM_026612|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	BC013510|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	AK007495|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2
mm9_v1_chr10_-_90586724_90586787	0.891921	PAX2.p2	AK150870|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK168129|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK077723|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK028313|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm9_v1_chr19_-_6128133_6128278	0.891319	PAX2.p2	BC016091|Snx15|69024|sorting nexin 15	NM_026912|Snx15|69024|sorting nexin 15
mm9_v1_chr6_-_24477549_24477560	0.888701	PAX2.p2	AK008156|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK008286|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK008414|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019242|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	BC028633|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK008155|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009396|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009461|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009493|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009608|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009652|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK010024|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK010090|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019084|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019201|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019215|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019291|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019354|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr17_+_36116923_36116951	0.888621	PAX2.p2	BC010298|Gnl1|14670|guanine nucleotide binding protein-like 1	AK078187|Gnl1|14670|guanine nucleotide binding protein-like 1
mm9_v1_chr11_+_75275123_75275158	0.887577	PAX2.p2	AK018628|2210403K04Rik|100042498|RIKEN cDNA 2210403K04 gene	AK008813|2210403K04Rik|100042498|RIKEN cDNA 2210403K04 gene
mm9_v1_chr10_-_57252252_57252346	0.880802	PAX2.p2	AF181685|Serinc1|56442|serine incorporator 1	AK148745|Serinc1|56442|serine incorporator 1	AK050514|Serinc1|56442|serine incorporator 1	AB029500|Serinc1|56442|serine incorporator 1	AK088340|Serinc1|56442|serine incorporator 1	AK133668|Serinc1|56442|serine incorporator 1	AK133975|Serinc1|56442|serine incorporator 1	AK161707|Serinc1|56442|serine incorporator 1	AK005203|Serinc1|56442|serine incorporator 1	AK167817|Serinc1|56442|serine incorporator 1	AK002847|Serinc1|56442|serine incorporator 1	AK141574|Serinc1|56442|serine incorporator 1	AK160498|Serinc1|56442|serine incorporator 1	AK159436|Serinc1|56442|serine incorporator 1	BC006940|Serinc1|56442|serine incorporator 1	NM_019760|Serinc1|56442|serine incorporator 1
mm9_v1_chr11_+_31770872_31770914	0.876606	PAX2.p2	AK154289|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4	AK089951|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4	AK162101|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4
mm9_v1_chr8_+_11758322_11758364	0.876173	PAX2.p2	NM_001113518|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	NM_017402|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	BC044838|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AK052545|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AY220301|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)
mm9_v1_chr14_-_73725611_73725643	0.872563	PAX2.p2	AK141028|Rb1|19645|retinoblastoma 1
mm9_v1_chr6_+_72047563_72047686	0.869965	PAX2.p2	AK165726|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_001035228|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_011375|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119416|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK159000|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK012961|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018048|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC138557|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC138559|St3gal5|20454|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
mm9_v1_chr4_+_108292534_108292631	0.867213	PAX2.p2	AK146601|Cc2d1b|319965|coiled-coil and C2 domain containing 1B	AK043839|Cc2d1b|319965|coiled-coil and C2 domain containing 1B	NM_177045|Cc2d1b|319965|coiled-coil and C2 domain containing 1B	AK148162|Cc2d1b|319965|coiled-coil and C2 domain containing 1B
mm9_v1_chr10_+_89149113_89149139	0.858418	PAX2.p2	AK048993|1500026H17Rik|69002|RIKEN cDNA 1500026H17 gene	AK005299|1500026H17Rik|69002|RIKEN cDNA 1500026H17 gene	AK085365|1500026H17Rik|69002|RIKEN cDNA 1500026H17 gene
mm9_v1_chr18_-_62339609_62339644	0.857828	PAX2.p2	BC032883|Adrb2|11555|adrenergic receptor, beta 2	NM_007420|Adrb2|11555|adrenergic receptor, beta 2	AK080241|Adrb2|11555|adrenergic receptor, beta 2	AK080276|Adrb2|11555|adrenergic receptor, beta 2
mm9_v1_chr19_+_46836085_46836138	0.857273	PAX2.p2	AK053711|Cnnm2|94219|cyclin M2	AK159616|Cnnm2|94219|cyclin M2	AK044400|Cnnm2|94219|cyclin M2	NM_001102471|Cnnm2|94219|cyclin M2	NM_033569|Cnnm2|94219|cyclin M2	BC012956|Cnnm2|94219|cyclin M2	AK032006|Cnnm2|94219|cyclin M2
mm9_v1_chr18_-_80904852_80904931	0.856306	PAX2.p2	EU887569|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887571|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887572|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AF049606|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK004810|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164111|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164112|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_016791|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr12_+_33505364_33505391	0.848726	PAX2.p2	AY679720|Nampt|59027|nicotinamide phosphoribosyltransferase	AK086415|Nampt|59027|nicotinamide phosphoribosyltransferase	AK153926|Nampt|59027|nicotinamide phosphoribosyltransferase	BC004059|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr2_+_134611931_134611941	0.845458	PAX2.p2	BC058710|Plcb1|18795|phospholipase C, beta 1
mm9_v1_chr7_+_5031809_5032021	0.845373	PAX2.p2	AK155033|Epn1|13854|epsin 1	BC067206|Epn1|13854|epsin 1	BC099682|Epn1|13854|epsin 1	NM_010147|Epn1|13854|epsin 1
mm9_v1_chr5_-_131783136_131783155	0.843684	PAX2.p2	AK035817|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)
mm9_v1_chr9_+_89804723_89804776	0.843484	PAX2.p2	AK079638|Rasgrf1|19417|RAS protein-specific guanine nucleotide-releasing factor 1	BC042449|Rasgrf1|19417|RAS protein-specific guanine nucleotide-releasing factor 1	AK140227|Rasgrf1|19417|RAS protein-specific guanine nucleotide-releasing factor 1	AK140380|Rasgrf1|19417|RAS protein-specific guanine nucleotide-releasing factor 1	AK162908|Rasgrf1|19417|RAS protein-specific guanine nucleotide-releasing factor 1	AK038936|Rasgrf1|19417|RAS protein-specific guanine nucleotide-releasing factor 1	AF169826|Rasgrf1|19417|RAS protein-specific guanine nucleotide-releasing factor 1	BC138682|Rasgrf1|19417|RAS protein-specific guanine nucleotide-releasing factor 1	BC138683|Rasgrf1|19417|RAS protein-specific guanine nucleotide-releasing factor 1
mm9_v1_chr14_-_56204047_56204200	0.841116	PAX2.p2	BC024704|Fam158a|85308|family with sequence similarity 158, member A	AK005154|Fam158a|85308|family with sequence similarity 158, member A	NM_033146|Fam158a|85308|family with sequence similarity 158, member A	AK144394|Fam158a|85308|family with sequence similarity 158, member A	AB054001|Fam158a|85308|family with sequence similarity 158, member A	AK154475|Fam158a|85308|family with sequence similarity 158, member A
mm9_v1_chr8_-_113917651_113917728	0.840694	PAX2.p2	AY660882|Fa2h|338521|fatty acid 2-hydroxylase	BC046985|Fa2h|338521|fatty acid 2-hydroxylase	BC111912|Fa2h|338521|fatty acid 2-hydroxylase	BC128080|Fa2h|338521|fatty acid 2-hydroxylase	BC128081|Fa2h|338521|fatty acid 2-hydroxylase	AK090338|Fa2h|338521|fatty acid 2-hydroxylase	AK033736|Fa2h|338521|fatty acid 2-hydroxylase	AK161502|Fa2h|338521|fatty acid 2-hydroxylase	NM_178086|Fa2h|338521|fatty acid 2-hydroxylase
mm9_v1_chr19_-_4615180_4615322	0.839372	PAX2.p2	BC023156|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr5_-_115223373_115223529	0.835137	PAX2.p2	AF148693|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK005365|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK017943|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC043062|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC056993|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077360|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_019834|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK220323|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077359|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK148029|Git2|26431|G protein-coupled receptor kinase-interactor 2
mm9_v1_chr4_+_129662284_129662511	0.834086	PAX2.p2	BC056926|Bai2|230775|brain-specific angiogenesis inhibitor 2	NM_173071|Bai2|230775|brain-specific angiogenesis inhibitor 2	AK158735|Bai2|230775|brain-specific angiogenesis inhibitor 2
mm9_v1_chr7_-_52722144_52722269	0.833407	PAX2.p2	AY095934|Bax|12028|BCL2-associated X protein	L22472|Bax|12028|BCL2-associated X protein	AK149994|Bax|12028|BCL2-associated X protein	AK013298|Bax|12028|BCL2-associated X protein	BC053380|Bax|12028|BCL2-associated X protein	BC018228|Bax|12028|BCL2-associated X protein	AK159233|Bax|12028|BCL2-associated X protein	NM_007527|Bax|12028|BCL2-associated X protein
mm9_v1_chr8_+_125372273_125372281	0.829812	PAX2.p2	NM_007662|Cdh15|12555|cadherin 15
mm9_v1_chr18_+_34407238_34407352	0.828659	PAX2.p2	AK039061|Apc|11789|adenomatosis polyposis coli	L19608|Apc|11789|adenomatosis polyposis coli	AK082724|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr8_+_11758376_11758449	0.825254	PAX2.p2	AF247654|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AF343877|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)
mm9_v1_chr9_-_41932195_41932209	0.825234	PAX2.p2	AB015790|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing
mm9_v1_chrX_+_160346948_160347157	0.82512	PAX2.p2	AK045558|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK047724|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK167690|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK053941|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK005223|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	BC046964|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	NM_026887|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK043776|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit
mm9_v1_chr15_+_81641869_81641976	0.823516	PAX2.p2	AK145125|Tef|21685|thyrotroph embryonic factor	AK154472|Tef|21685|thyrotroph embryonic factor	BC036982|Tef|21685|thyrotroph embryonic factor	AF194420|Tef|21685|thyrotroph embryonic factor	AK147965|Tef|21685|thyrotroph embryonic factor
mm9_v1_chr3_+_152059620_152059689	0.822013	PAX2.p2	BC060614|Zzz3|108946|zinc finger, ZZ domain containing 3	NM_198416|Zzz3|108946|zinc finger, ZZ domain containing 3
mm9_v1_chr1_-_93355893_93355916	0.820253	PAX2.p2	AK159847|Per2|18627|period homolog 2 (Drosophila)	AK165556|Per2|18627|period homolog 2 (Drosophila)	NM_011066|Per2|18627|period homolog 2 (Drosophila)
mm9_v1_chr9_-_70504934_70505009	0.820124	PAX2.p2	BC058683|Fam63b|235461|family with sequence similarity 63, member B	AK046623|Fam63b|235461|family with sequence similarity 63, member B	BC049357|Fam63b|235461|family with sequence similarity 63, member B	AK046403|Fam63b|235461|family with sequence similarity 63, member B	AK035930|Fam63b|235461|family with sequence similarity 63, member B	NM_172772|Fam63b|235461|family with sequence similarity 63, member B	AK220158|Fam63b|235461|family with sequence similarity 63, member B
mm9_v1_chr19_-_57083064_57083064	0.814405	PAX2.p2	NM_001177796|Afap1l2|226250|actin filament associated protein 1-like 2	NM_001177797|Afap1l2|226250|actin filament associated protein 1-like 2	NM_146102|Afap1l2|226250|actin filament associated protein 1-like 2
mm9_v1_chr4_+_43394941_43394946	0.813882	PAX2.p2	BC050780|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr8_+_119780918_119781056	0.81102	PAX2.p2	NM_001163262|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene	AK085367|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene	BC158118|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr14_-_19071459_19071620	0.807567	PAX2.p2	BC096461|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	AK079075|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	AK054522|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	U12142|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2	NM_011584|Nr1d2|353187|nuclear receptor subfamily 1, group D, member 2
mm9_v1_chr9_-_41932371_41932387	0.807244	PAX2.p2	AK147303|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing	NM_011436|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing
mm9_v1_chr11_-_6375845_6375919	0.804919	PAX2.p2	AF017630|Purb|19291|purine rich element binding protein B	NM_011221|Purb|19291|purine rich element binding protein B
mm9_v1_chr7_-_133520899_133520943	0.804443	PAX2.p2	BC026854|Spns1|73658|spinster homolog 1 (Drosophila)	AK033907|Spns1|73658|spinster homolog 1 (Drosophila)	AF212372|Spns1|73658|spinster homolog 1 (Drosophila)	AK154353|Spns1|73658|spinster homolog 1 (Drosophila)	AK166931|Spns1|73658|spinster homolog 1 (Drosophila)	AK008721|Spns1|73658|spinster homolog 1 (Drosophila)
mm9_v1_chr6_+_134870418_134870458	0.79784	PAX2.p2	AK047669|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	NM_009875|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK050240|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK158411|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	BC014296|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr16_+_17276434_17276446	0.787975	PAX2.p2	AB041601|Tmem191c|224019|transmembrane protein 191C
mm9_v1_chr11_+_52578152_52578230	0.78749	PAX2.p2	AK046350|Fstl4|320027|follistatin-like 4	AK081114|Fstl4|320027|follistatin-like 4	AF374459|Fstl4|320027|follistatin-like 4	NM_177059|Fstl4|320027|follistatin-like 4	BC132353|Fstl4|320027|follistatin-like 4	BC144824|Fstl4|320027|follistatin-like 4
mm9_v1_chr7_+_129432810_129432849	0.786693	PAX2.p2	X53532|Prkcb|18751|protein kinase C, beta	BC127083|Prkcb|18751|protein kinase C, beta	X59274|Prkcb|18751|protein kinase C, beta
mm9_v1_chr17_+_36116889_36116901	0.784765	PAX2.p2	NM_008136|Gnl1|14670|guanine nucleotide binding protein-like 1
mm9_v1_chr14_-_104242892_104242969	0.784673	PAX2.p2	U32329|Ednrb|13618|endothelin receptor type B	AK085165|Ednrb|13618|endothelin receptor type B	AK076426|Ednrb|13618|endothelin receptor type B	AK085532|Ednrb|13618|endothelin receptor type B	NM_007904|Ednrb|13618|endothelin receptor type B
mm9_v1_chr13_+_109004589_109004634	0.78031	PAX2.p2	AK049118|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	BC005602|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	NM_029001|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK050441|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK137668|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK018616|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK037162|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)
mm9_v1_chr1_+_36364557_36364660	0.780282	PAX2.p2	NM_001172205|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	NM_001172206|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	NM_145996|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK029237|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK085015|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK149839|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK156376|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK156622|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK156934|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK157607|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK150170|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK155555|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	BC027152|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)
mm9_v1_chr18_+_45719101_45719122	0.7788	PAX2.p2	AK149082|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK039033|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
mm9_v1_chr14_-_78936606_78936676	0.778198	PAX2.p2	NM_001164503|Akap11|219181|A kinase (PRKA) anchor protein 11
mm9_v1_chr7_+_16683891_16684052	0.77753	PAX2.p2	AK050623|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK171998|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	BC004804|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK013895|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK004826|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK005372|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	AK136689|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha	NM_025898|Napa|108124|N-ethylmaleimide sensitive fusion protein attachment protein alpha
mm9_v1_chr1_+_50984361_50984403	0.771847	PAX2.p2	AB041565|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AK029307|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	NM_019790|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AK076254|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AK135038|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	BC034850|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2	AB017270|Tmeff2|56363|transmembrane protein with EGF-like and two follistatin-like domains 2
mm9_v1_chr15_-_91403685_91403705	0.770973	PAX2.p2	AK147341|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13	NM_001033633|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13
mm9_v1_chr18_+_32322742_32322855	0.77067	PAX2.p2	AK036364|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	NM_011946|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	AK143367|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	AK050667|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	U43186|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2
mm9_v1_chr9_-_20877907_20878057	0.770343	PAX2.p2	AK010211|Fdx1l|68165|ferredoxin 1-like	AK008401|Fdx1l|68165|ferredoxin 1-like	AK020979|Fdx1l|68165|ferredoxin 1-like	NM_001039824|Fdx1l|68165|ferredoxin 1-like	BC061189|Fdx1l|68165|ferredoxin 1-like	BC172154|Fdx1l|68165|ferredoxin 1-like
mm9_v1_chr16_+_45158927_45158941	0.770281	PAX2.p2	AK005266|Atg3|67841|autophagy-related 3 (yeast)	AK011409|Atg3|67841|autophagy-related 3 (yeast)	AK150914|Atg3|67841|autophagy-related 3 (yeast)	AK159231|Atg3|67841|autophagy-related 3 (yeast)	NM_026402|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr2_-_134469754_134469776	0.769143	PAX2.p2	BC050918|Tmx4|52837|thioredoxin-related transmembrane protein 4	AK033111|Tmx4|52837|thioredoxin-related transmembrane protein 4
mm9_v1_chr5_+_145306751_145306864	0.767843	PAX2.p2	AK134806|Nptx2|53324|neuronal pentraxin 2	NM_016789|Nptx2|53324|neuronal pentraxin 2	BC026054|Nptx2|53324|neuronal pentraxin 2	AF049124|Nptx2|53324|neuronal pentraxin 2
mm9_v1_chr3_+_99966382_99966393	0.765854	PAX2.p2	Y17851|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2
mm9_v1_chr18_-_23200150_23200199	0.76484	PAX2.p2	AK006244|Nol4|319211|nucleolar protein 4	AK031008|Nol4|319211|nucleolar protein 4	NM_199024|Nol4|319211|nucleolar protein 4	AK005959|Nol4|319211|nucleolar protein 4
mm9_v1_chr12_+_25659777_25659836	0.762561	PAX2.p2	AK021172|Kidins220|77480|kinase D-interacting substrate 220	NM_001081378|Kidins220|77480|kinase D-interacting substrate 220	BC157898|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr13_+_64533662_64533685	0.761241	PAX2.p2	AK044470|Cdk20|105278|cyclin-dependent kinase 20
mm9_v1_chr15_+_38591604_38591751	0.759742	PAX2.p2	NM_025494|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK075779|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK129007|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK151237|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK006323|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK168914|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	BC010217|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AB088407|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	U13839|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1
mm9_v1_chr17_-_25377052_25377092	0.75901	PAX2.p2	BC055872|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	NM_172529|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	BC023869|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	AK044021|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	AK078230|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit	AY465529|Gnptg|214505|N-acetylglucosamine-1-phosphotransferase, gamma subunit
mm9_v1_chr6_-_24477565_24477581	0.758418	PAX2.p2	AK009642|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019245|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019368|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019430|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009338|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009840|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009985|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK010092|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019364|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019359|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009775|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr1_+_167391318_167391475	0.757514	PAX2.p2	AK011889|Brp44|70456|brain protein 44	NM_027430|Brp44|70456|brain protein 44	AK151522|Brp44|70456|brain protein 44	AK002233|Brp44|70456|brain protein 44	AK008044|Brp44|70456|brain protein 44
mm9_v1_chr1_+_145487825_145487990	0.753571	PAX2.p2	AK036141|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_020025|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK034371|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK083168|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK080106|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC046322|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm9_v1_chr2_+_128793137_128793209	0.7523	PAX2.p2	AK050503|Zc3h6|78751|zinc finger CCCH type containing 6	NM_178404|Zc3h6|78751|zinc finger CCCH type containing 6	AK013610|Zc3h6|78751|zinc finger CCCH type containing 6	AK019345|Zc3h6|78751|zinc finger CCCH type containing 6	AK039171|Zc3h6|78751|zinc finger CCCH type containing 6	AK014766|Zc3h6|78751|zinc finger CCCH type containing 6	BC058173|Zc3h6|78751|zinc finger CCCH type containing 6
mm9_v1_chr6_+_61130318_61130318	0.751178	PAX2.p2	NM_001164316|Fam190a|232035|family with sequence similarity 190, member A	NM_183310|Fam190a|232035|family with sequence similarity 190, member A
mm9_v1_chr16_+_94592307_94592357	0.750601	PAX2.p2	AK088273|Ttc3|22129|tetratricopeptide repeat domain 3	NM_009441|Ttc3|22129|tetratricopeptide repeat domain 3	AK053765|Ttc3|22129|tetratricopeptide repeat domain 3	AK170087|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr14_+_21895346_21895378	0.749955	PAX2.p2	AK151863|Adk|11534|adenosine kinase
mm9_v1_chr1_+_37356745_37356791	0.744674	PAX2.p2	AK089671|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	AK149414|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr15_-_57723866_57723934	0.743875	PAX2.p2	AK075631|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr9_+_56785271_56785306	0.74292	PAX2.p2	AK004456|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC009145|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)	NM_133976|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr10_-_57252184_57252250	0.740839	PAX2.p2	BC017148|Serinc1|56442|serine incorporator 1	AK159280|Serinc1|56442|serine incorporator 1
mm9_v1_chr15_+_101097276_101097334	0.739589	PAX2.p2	AK157203|Nr4a1|15370|nuclear receptor subfamily 4, group A, member 1	NM_010444|Nr4a1|15370|nuclear receptor subfamily 4, group A, member 1	AK004709|Nr4a1|15370|nuclear receptor subfamily 4, group A, member 1	J04113|Nr4a1|15370|nuclear receptor subfamily 4, group A, member 1	BC004770|Nr4a1|15370|nuclear receptor subfamily 4, group A, member 1	X60132|Nr4a1|15370|nuclear receptor subfamily 4, group A, member 1
mm9_v1_chr17_+_53618611_53618848	0.737344	PAX2.p2	AK036011|Rab5a|271457|RAB5A, member RAS oncogene family	BC004842|Rab5a|271457|RAB5A, member RAS oncogene family	AK010495|Rab5a|271457|RAB5A, member RAS oncogene family	AK150405|Rab5a|271457|RAB5A, member RAS oncogene family	AK002631|Rab5a|271457|RAB5A, member RAS oncogene family	AK150296|Rab5a|271457|RAB5A, member RAS oncogene family	AK151066|Rab5a|271457|RAB5A, member RAS oncogene family	AK153131|Rab5a|271457|RAB5A, member RAS oncogene family	AK159706|Rab5a|271457|RAB5A, member RAS oncogene family	AK150346|Rab5a|271457|RAB5A, member RAS oncogene family	BC034370|Rab5a|271457|RAB5A, member RAS oncogene family	AK008198|Rab5a|271457|RAB5A, member RAS oncogene family
mm9_v1_chr13_-_95055235_95055506	0.736925	PAX2.p2	BC034283|Scamp1|107767|secretory carrier membrane protein 1	NM_029153|Scamp1|107767|secretory carrier membrane protein 1	AK135058|Scamp1|107767|secretory carrier membrane protein 1	AK154671|Scamp1|107767|secretory carrier membrane protein 1	AK170343|Scamp1|107767|secretory carrier membrane protein 1
mm9_v1_chr13_-_43266716_43266788	0.735883	PAX2.p2	BC125307|Tbc1d7|67046|TBC1 domain family, member 7	BC125309|Tbc1d7|67046|TBC1 domain family, member 7	BC145156|Tbc1d7|67046|TBC1 domain family, member 7	BC145157|Tbc1d7|67046|TBC1 domain family, member 7	AK011356|Tbc1d7|67046|TBC1 domain family, member 7	NM_025935|Tbc1d7|67046|TBC1 domain family, member 7	AK156543|Tbc1d7|67046|TBC1 domain family, member 7
mm9_v1_chr16_-_5049999_5050021	0.732504	PAX2.p2	NM_001079814|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)	NM_028720|Glyr1|74022|glyoxylate reductase 1 homolog (Arabidopsis)
mm9_v1_chr13_+_5860701_5860744	0.732041	PAX2.p2	NM_011803|Klf6|23849|Kruppel-like factor 6	AY027436|Klf6|23849|Kruppel-like factor 6
mm9_v1_chr8_+_4166521_4166600	0.730897	PAX2.p2	AK045240|Evi5l|213027|ecotropic viral integration site 5 like	AK087482|Evi5l|213027|ecotropic viral integration site 5 like	NM_001039578|Evi5l|213027|ecotropic viral integration site 5 like	AK134074|Evi5l|213027|ecotropic viral integration site 5 like	BC042653|Evi5l|213027|ecotropic viral integration site 5 like
mm9_v1_chr1_-_134603848_134603902	0.73085	PAX2.p2	AK129207|Nfasc|269116|neurofascin	NM_001160318|Nfasc|269116|neurofascin
mm9_v1_chr2_+_119698245_119698286	0.730755	PAX2.p2	AK133775|Mga|29808|MAX gene associated
mm9_v1_chr1_+_155500166_155500298	0.7298	PAX2.p2	NM_026380|Rgs8|67792|regulator of G-protein signaling 8	BC065056|Rgs8|67792|regulator of G-protein signaling 8	AK044337|Rgs8|67792|regulator of G-protein signaling 8	AK142301|Rgs8|67792|regulator of G-protein signaling 8
mm9_v1_chr12_+_8928820_8928943	0.725431	PAX2.p2	AK165638|Laptm4a|17775|lysosomal-associated protein transmembrane 4A	AK088958|Laptm4a|17775|lysosomal-associated protein transmembrane 4A	AK075699|Laptm4a|17775|lysosomal-associated protein transmembrane 4A	BC089021|Laptm4a|17775|lysosomal-associated protein transmembrane 4A	EF437361|Laptm4a|17775|lysosomal-associated protein transmembrane 4A	BC086667|Laptm4a|17775|lysosomal-associated protein transmembrane 4A
mm9_v1_chr8_+_98226914_98226962	0.725426	PAX2.p2	NM_001195006|Ndrg4|234593|N-myc downstream regulated gene 4	NM_145602|Ndrg4|234593|N-myc downstream regulated gene 4	AK168873|Ndrg4|234593|N-myc downstream regulated gene 4	AK090374|Ndrg4|234593|N-myc downstream regulated gene 4	AK144294|Ndrg4|234593|N-myc downstream regulated gene 4	BC006595|Ndrg4|234593|N-myc downstream regulated gene 4
mm9_v1_chr6_+_83745142_83745245	0.722815	PAX2.p2	NM_001164187|Nagk|56174|N-acetylglucosamine kinase	AK155292|Nagk|56174|N-acetylglucosamine kinase	BC004689|Nagk|56174|N-acetylglucosamine kinase	AJ242911|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chr3_+_45182311_45182350	0.722582	PAX2.p2	BC037259|Pcdh10|18526|protocadherin 10	NM_001098170|Pcdh10|18526|protocadherin 10	NM_001098171|Pcdh10|18526|protocadherin 10	NM_001098172|Pcdh10|18526|protocadherin 10	NM_011043|Pcdh10|18526|protocadherin 10	AK081621|Pcdh10|18526|protocadherin 10	AK081977|Pcdh10|18526|protocadherin 10	BC026712|Pcdh10|18526|protocadherin 10	AK122503|Pcdh10|18526|protocadherin 10
mm9_v1_chr11_-_116060118_116060156	0.718415	PAX2.p2	AK054446|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl
mm9_v1_chr3_+_88981372_88981433	0.716939	PAX2.p2	AK146204|Scamp3|24045|secretory carrier membrane protein 3	NM_011886|Scamp3|24045|secretory carrier membrane protein 3	BC002021|Scamp3|24045|secretory carrier membrane protein 3	AK160549|Scamp3|24045|secretory carrier membrane protein 3	AK135335|Scamp3|24045|secretory carrier membrane protein 3
mm9_v1_chr11_+_119129280_119129348	0.715805	PAX2.p2	NM_001159324|Gaa|14387|glucosidase, alpha, acid	AK146538|Gaa|14387|glucosidase, alpha, acid	NM_008064|Gaa|14387|glucosidase, alpha, acid	U49351|Gaa|14387|glucosidase, alpha, acid	AK052211|Gaa|14387|glucosidase, alpha, acid	AK054057|Gaa|14387|glucosidase, alpha, acid	AK141546|Gaa|14387|glucosidase, alpha, acid	AK088481|Gaa|14387|glucosidase, alpha, acid
mm9_v1_chr12_+_103793130_103793206	0.715547	PAX2.p2	M64278|Chga|12652|chromogranin A	NM_007693|Chga|12652|chromogranin A	AK144504|Chga|12652|chromogranin A	BC026554|Chga|12652|chromogranin A
mm9_v1_chr8_-_48374755_48374779	0.71534	PAX2.p2	AK053894|Stox2|71069|storkhead box 2	NM_001114311|Stox2|71069|storkhead box 2
mm9_v1_chr19_+_47089736_47089849	0.715205	PAX2.p2	AK144917|Ina|226180|internexin neuronal intermediate filament protein, alpha
mm9_v1_chr15_-_81229961_81230023	0.715	PAX2.p2	CT010318|St13|70356|suppression of tumorigenicity 13
mm9_v1_chr10_+_78037170_78037331	0.71487	PAX2.p2	NM_173751|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like	BC056459|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like	BC052054|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like
mm9_v1_chr4_-_47004585_47004626	0.713708	PAX2.p2	NM_001081141|Gabbr2|242425|gamma-aminobutyric acid (GABA) B receptor, 2
mm9_v1_chr11_-_54846882_54846976	0.711668	PAX2.p2	AK161625|Anxa6|11749|annexin A6	AK010342|Anxa6|11749|annexin A6	BC005595|Anxa6|11749|annexin A6	AK077843|Anxa6|11749|annexin A6	AK013026|Anxa6|11749|annexin A6	AK030728|Anxa6|11749|annexin A6	AK150035|Anxa6|11749|annexin A6	AK203372|Anxa6|11749|annexin A6	AK179628|Anxa6|11749|annexin A6	AK147066|Anxa6|11749|annexin A6	AK160754|Anxa6|11749|annexin A6	AK146509|Anxa6|11749|annexin A6	AK146592|Anxa6|11749|annexin A6	AK154101|Anxa6|11749|annexin A6	AK087941|Anxa6|11749|annexin A6	AK169774|Anxa6|11749|annexin A6	NM_001110211|Anxa6|11749|annexin A6	NM_013472|Anxa6|11749|annexin A6
mm9_v1_chr17_+_25270317_25270453	0.710023	PAX2.p2	AK030444|Clcn7|26373|chloride channel 7	NM_011930|Clcn7|26373|chloride channel 7	BC054799|Clcn7|26373|chloride channel 7	BC050907|Clcn7|26373|chloride channel 7	BC053049|Clcn7|26373|chloride channel 7	AK128981|Clcn7|26373|chloride channel 7
mm9_v1_chr7_+_64845887_64845914	0.708712	PAX2.p2	AK083107|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	NM_001038701|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm9_v1_chrX_+_131135770_131135834	0.708139	PAX2.p2	AK141861|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK164115|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK168116|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	BC005461|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK169104|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK077716|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	NM_019868|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2
mm9_v1_chr15_-_91403581_91403640	0.707636	PAX2.p2	BC119586|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13	BC119587|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13	AK041673|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13
mm9_v1_chr9_-_44607274_44607334	0.706836	PAX2.p2	AK090375|Tmem25|71687|transmembrane protein 25	AK165827|Tmem25|71687|transmembrane protein 25	AK002841|Tmem25|71687|transmembrane protein 25	NM_027865|Tmem25|71687|transmembrane protein 25	BC060057|Tmem25|71687|transmembrane protein 25	BC060243|Tmem25|71687|transmembrane protein 25	AK154206|Tmem25|71687|transmembrane protein 25	AK165199|Tmem25|71687|transmembrane protein 25
mm9_v1_chr10_+_125403274_125403331	0.705607	PAX2.p2	AK035166|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3	NM_177152|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3	AK137007|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3	BC065142|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3	AY505341|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3
mm9_v1_chr11_-_100800603_100800824	0.705325	PAX2.p2	U06922|Stat3|20848|signal transducer and activator of transcription 3	AK145486|Stat3|20848|signal transducer and activator of transcription 3	U08378|Stat3|20848|signal transducer and activator of transcription 3	BC003806|Stat3|20848|signal transducer and activator of transcription 3	U30709|Stat3|20848|signal transducer and activator of transcription 3	BC019168|Stat3|20848|signal transducer and activator of transcription 3	AK153472|Stat3|20848|signal transducer and activator of transcription 3	AK153005|Stat3|20848|signal transducer and activator of transcription 3	L29278|Stat3|20848|signal transducer and activator of transcription 3	NM_011486|Stat3|20848|signal transducer and activator of transcription 3	NM_213659|Stat3|20848|signal transducer and activator of transcription 3	NM_213660|Stat3|20848|signal transducer and activator of transcription 3
mm9_v1_chr10_+_125403223_125403262	0.701907	PAX2.p2	AK044994|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3
mm9_v1_chr7_-_116895708_116895795	0.701833	PAX2.p2	AK009147|Tmem9b|56786|TMEM9 domain family, member B	AK077253|Tmem9b|56786|TMEM9 domain family, member B	AK007430|Tmem9b|56786|TMEM9 domain family, member B	BC002208|Tmem9b|56786|TMEM9 domain family, member B	NM_020050|Tmem9b|56786|TMEM9 domain family, member B	AK147127|Tmem9b|56786|TMEM9 domain family, member B
mm9_v1_chr12_+_80231774_80231822	0.700417	PAX2.p2	NM_009705|Arg2|11847|arginase type II	BC023349|Arg2|11847|arginase type II	U90886|Arg2|11847|arginase type II	AF032466|Arg2|11847|arginase type II
mm9_v1_chr18_-_80348125_80348161	0.696927	PAX2.p2	BC044898|Adnp2|240442|ADNP homeobox 2	BC047352|Adnp2|240442|ADNP homeobox 2
mm9_v1_chr10_+_110601745_110601988	0.696485	PAX2.p2	AK037158|Osbpl8|237542|oxysterol binding protein-like 8	AK050244|Osbpl8|237542|oxysterol binding protein-like 8	NM_001003717|Osbpl8|237542|oxysterol binding protein-like 8	NM_175489|Osbpl8|237542|oxysterol binding protein-like 8
mm9_v1_chr7_-_13619936_13620150	0.692993	PAX2.p2	BC012230|Chmp2a|68953|chromatin modifying protein 2A	AK005267|Chmp2a|68953|chromatin modifying protein 2A	NM_026885|Chmp2a|68953|chromatin modifying protein 2A
mm9_v1_chr10_-_122422886_122422975	0.691122	PAX2.p2	AK052706|D630033A02Rik|402753|RIKEN cDNA D630033A02 gene
mm9_v1_chr11_-_72609306_72609347	0.690747	PAX2.p2	BC086682|Cyb5d2|192986|cytochrome b5 domain containing 2	NM_001024926|Cyb5d2|192986|cytochrome b5 domain containing 2	AK142515|Cyb5d2|192986|cytochrome b5 domain containing 2
mm9_v1_chr13_+_19040215_19040285	0.684771	PAX2.p2	AK132168|Amph|218038|amphiphysin	BC054718|Amph|218038|amphiphysin	NM_175007|Amph|218038|amphiphysin	AK047144|Amph|218038|amphiphysin
mm9_v1_chr1_-_31006599_31006606	0.682588	PAX2.p2	AK148288|Ptp4a1|19243|protein tyrosine phosphatase 4a1	NM_011200|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr5_+_25265761_25265876	0.682178	PAX2.p2	BC053106|Actr3b|242894|ARP3 actin-related protein 3 homolog B (yeast)	BC082279|Actr3b|242894|ARP3 actin-related protein 3 homolog B (yeast)	NM_001004365|Actr3b|242894|ARP3 actin-related protein 3 homolog B (yeast)	AK144936|Actr3b|242894|ARP3 actin-related protein 3 homolog B (yeast)	AK035798|Actr3b|242894|ARP3 actin-related protein 3 homolog B (yeast)
mm9_v1_chr6_-_39675456_39675512	0.680998	PAX2.p2	AK140431|Braf|109880|Braf transforming gene	NM_139294|Braf|109880|Braf transforming gene
mm9_v1_chr12_-_11443284_11443537	0.680716	PAX2.p2	BC046226|Vsnl1|26950|visinin-like 1	AK144454|Vsnl1|26950|visinin-like 1	AK160224|Vsnl1|26950|visinin-like 1	AJ489331|Vsnl1|26950|visinin-like 1	NM_012038|Vsnl1|26950|visinin-like 1
mm9_v1_chr2_-_26244834_26244836	0.679606	PAX2.p2	NM_001085407|Sdccag3|68112|serologically defined colon cancer antigen 3	NM_001085408|Sdccag3|68112|serologically defined colon cancer antigen 3	NM_026563|Sdccag3|68112|serologically defined colon cancer antigen 3
mm9_v1_chr17_-_66426165_66426256	0.679113	PAX2.p2	BC023046|Ankrd12|106585|ankyrin repeat domain 12
mm9_v1_chr9_+_108710676_108710814	0.675925	PAX2.p2	BC064818|Nckipsd|80987|NCK interacting protein with SH3 domain	NM_030729|Nckipsd|80987|NCK interacting protein with SH3 domain	AK134725|Nckipsd|80987|NCK interacting protein with SH3 domain	AF130313|Nckipsd|80987|NCK interacting protein with SH3 domain
mm9_v1_chr4_-_120689813_120689895	0.675415	PAX2.p2	AK152757|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	BC032217|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	AK145042|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	BC031581|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	BC052413|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	NM_133716|Smap2|69780|stromal membrane-associated GTPase-activating protein 2
mm9_v1_chr11_+_100931369_100931476	0.674908	PAX2.p2	AK143546|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	NM_013792|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK170758|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK158045|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK164125|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	BC055733|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	U85247|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm9_v1_chr4_+_33334929_33334957	0.674114	PAX2.p2	AK040358|Pnrc1|108767|proline-rich nuclear receptor coactivator 1
mm9_v1_chr3_-_151856716_151856729	0.672439	PAX2.p2	AK028049|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK008537|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK162194|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK136240|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr3_-_108029499_108029565	0.672188	PAX2.p2	BC030038|Sypl2|17306|synaptophysin-like 2	AB010140|Sypl2|17306|synaptophysin-like 2	NM_008596|Sypl2|17306|synaptophysin-like 2	AK082471|Sypl2|17306|synaptophysin-like 2	AK162663|Sypl2|17306|synaptophysin-like 2	AK052749|Sypl2|17306|synaptophysin-like 2	AK083422|Sypl2|17306|synaptophysin-like 2
mm9_v1_chr1_-_127808723_127808763	0.671138	PAX2.p2	BC058599|Lypd1|72585|Ly6/Plaur domain containing 1
mm9_v1_chr8_+_125372328_125372356	0.671076	PAX2.p2	BC157978|Cdh15|12555|cadherin 15
mm9_v1_chr11_-_116060358_116060358	0.670604	PAX2.p2	BC056448|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	NM_015729|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl
mm9_v1_chr10_+_34017221_34017318	0.668218	PAX2.p2	NM_030203|Tspyl4|72480|TSPY-like 4	AK034070|Tspyl4|72480|TSPY-like 4	AK158197|Tspyl4|72480|TSPY-like 4	BC017540|Tspyl4|72480|TSPY-like 4	BC034656|Tspyl4|72480|TSPY-like 4	AK030740|Tspyl4|72480|TSPY-like 4	AK034414|Tspyl4|72480|TSPY-like 4	AK020999|Tspyl4|72480|TSPY-like 4
mm9_v1_chr2_-_25211822_25211914	0.668094	PAX2.p2	AF285235|Dpp7|83768|dipeptidylpeptidase 7	AK028293|Dpp7|83768|dipeptidylpeptidase 7	BC027205|Dpp7|83768|dipeptidylpeptidase 7	NM_031843|Dpp7|83768|dipeptidylpeptidase 7	AK154193|Dpp7|83768|dipeptidylpeptidase 7	BC052861|Dpp7|83768|dipeptidylpeptidase 7	AK140406|Dpp7|83768|dipeptidylpeptidase 7	AK140420|Dpp7|83768|dipeptidylpeptidase 7
mm9_v1_chr8_+_96910392_96910428	0.666679	PAX2.p2	AK081688|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK159500|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK165832|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AB034991|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_022331|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK172874|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC013523|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
mm9_v1_chr7_-_112630662_112630781	0.664743	PAX2.p2	BC009660|Prkcdbp|109042|protein kinase C, delta binding protein	NM_028444|Prkcdbp|109042|protein kinase C, delta binding protein
mm9_v1_chr2_+_121274946_121274963	0.664471	PAX2.p2	NM_011354|Serf2|378702|small EDRK-rich factor 2
mm9_v1_chr6_-_113481340_113481484	0.662249	PAX2.p2	AK206599|Tmem111|66087|transmembrane protein 111	AK213319|Tmem111|66087|transmembrane protein 111	AK218418|Tmem111|66087|transmembrane protein 111	AK167819|Tmem111|66087|transmembrane protein 111
mm9_v1_chr18_+_12327237_12327264	0.659864	PAX2.p2	AK144623|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	NM_029623|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	AK010309|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	AK154240|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	AK159691|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	BC021846|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	BC012285|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene
mm9_v1_chr12_-_56593566_56593633	0.658928	PAX2.p2	BC046754|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	U36277|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	AK089215|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	AK151115|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	AK151608|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	NM_010907|Nfkbia|18035|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
mm9_v1_chr11_-_59778306_59778447	0.658069	PAX2.p2	CT010376|Rasd1|19416|RAS, dexamethasone-induced 1	BC034166|Rasd1|19416|RAS, dexamethasone-induced 1	AF009246|Rasd1|19416|RAS, dexamethasone-induced 1	NM_009026|Rasd1|19416|RAS, dexamethasone-induced 1	AK038932|Rasd1|19416|RAS, dexamethasone-induced 1
mm9_v1_chr13_+_46597461_46597559	0.656364	PAX2.p2	AK049813|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	BC050752|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK013331|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK033071|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK010235|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr19_+_21346734_21346785	0.654589	PAX2.p2	AK018054|Zfand5|22682|zinc finger, AN1-type domain 5	AK076397|Zfand5|22682|zinc finger, AN1-type domain 5	BC119124|Zfand5|22682|zinc finger, AN1-type domain 5	BC119126|Zfand5|22682|zinc finger, AN1-type domain 5	NM_009551|Zfand5|22682|zinc finger, AN1-type domain 5	AK131911|Zfand5|22682|zinc finger, AN1-type domain 5	BC080270|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chr10_+_115580947_115580958	0.654131	PAX2.p2	Z30313|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr11_-_75268137_75268225	0.653317	PAX2.p2	NM_138950|Wdr81|192652|WD repeat domain 81
mm9_v1_chr6_-_113481546_113481673	0.652166	PAX2.p2	AK020058|Tmem111|66087|transmembrane protein 111	AK046264|Tmem111|66087|transmembrane protein 111	BC004641|Tmem111|66087|transmembrane protein 111	AK075595|Tmem111|66087|transmembrane protein 111	NM_175101|Tmem111|66087|transmembrane protein 111	AK164779|Tmem111|66087|transmembrane protein 111
mm9_v1_chr2_-_130867226_130867250	0.648325	PAX2.p2	AB041809|Gfra4|14588|glial cell line derived neurotrophic factor family receptor alpha 4
mm9_v1_chr15_-_36723995_36724005	0.648236	PAX2.p2	BC050891|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr9_+_57369014_57369041	0.64823	PAX2.p2	NM_007747|Cox5a|12858|cytochrome c oxidase, subunit Va
mm9_v1_chr5_-_128938813_128938936	0.646009	PAX2.p2	AK083210|Tmem132d|243274|transmembrane protein 132D	NM_172885|Tmem132d|243274|transmembrane protein 132D
mm9_v1_chr19_+_26679649_26679686	0.644373	PAX2.p2	BC075641|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	NM_011416|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK020092|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr15_-_34012370_34012404	0.643954	PAX2.p2	
mm9_v1_chr2_-_30141815_30141820	0.643304	PAX2.p2	AB073968|Dolk|227697|dolichol kinase	BC019543|Dolk|227697|dolichol kinase
mm9_v1_chr4_-_70195870_70195917	0.64288	PAX2.p2	BC088994|Megf9|230316|multiple EGF-like-domains 9	BC138128|Megf9|230316|multiple EGF-like-domains 9	BC138129|Megf9|230316|multiple EGF-like-domains 9
mm9_v1_chr13_+_13876570_13876649	0.64286	PAX2.p2	AK148452|Gng4|14706|guanine nucleotide binding protein (G protein), gamma 4
mm9_v1_chr15_+_81977766_81977845	0.640734	PAX2.p2	AK217643|Srebf2|20788|sterol regulatory element binding factor 2	AF374267|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr11_+_43287820_43287845	0.639008	PAX2.p2	NM_026979|C1qtnf2|69183|C1q and tumor necrosis factor related protein 2
mm9_v1_chr18_+_40416615_40416659	0.638999	PAX2.p2	AK013700|2900055J20Rik|73001|RIKEN cDNA 2900055J20 gene
mm9_v1_chr8_+_115093942_115094124	0.637619	PAX2.p2	BC034628|Cntnap4|170571|contactin associated protein-like 4	NM_130457|Cntnap4|170571|contactin associated protein-like 4	AK142816|Cntnap4|170571|contactin associated protein-like 4	AK081891|Cntnap4|170571|contactin associated protein-like 4	AK053611|Cntnap4|170571|contactin associated protein-like 4	AK042607|Cntnap4|170571|contactin associated protein-like 4	AK173255|Cntnap4|170571|contactin associated protein-like 4	AF333770|Cntnap4|170571|contactin associated protein-like 4
mm9_v1_chr19_-_17912073_17912162	0.634841	PAX2.p2	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr8_-_108089811_108089973	0.634572	PAX2.p2	U21549|Atp6v0d1|11972|ATPase, H+ transporting, lysosomal V0 subunit D1	AB088408|Atp6v0d1|11972|ATPase, H+ transporting, lysosomal V0 subunit D1	U13840|Atp6v0d1|11972|ATPase, H+ transporting, lysosomal V0 subunit D1	BC011075|Atp6v0d1|11972|ATPase, H+ transporting, lysosomal V0 subunit D1	AK171515|Atp6v0d1|11972|ATPase, H+ transporting, lysosomal V0 subunit D1	AK083372|Atp6v0d1|11972|ATPase, H+ transporting, lysosomal V0 subunit D1	NM_013477|Atp6v0d1|11972|ATPase, H+ transporting, lysosomal V0 subunit D1	AK133921|Atp6v0d1|11972|ATPase, H+ transporting, lysosomal V0 subunit D1
mm9_v1_chr17_+_26852581_26852657	0.632985	PAX2.p2	AK030092|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	NM_029870|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK044760|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK020796|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132423|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132454|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr19_-_7292086_7292113	0.631342	PAX2.p2	NM_007750|Cox8a|12868|cytochrome c oxidase, subunit VIIIa
mm9_v1_chr19_-_21727395_21727425	0.631261	PAX2.p2	AK016266|1110059E24Rik|66206|RIKEN cDNA 1110059E24 gene
mm9_v1_chr11_+_68902025_68902081	0.629258	PAX2.p2	BC055105|Vamp2|22318|vesicle-associated membrane protein 2	NM_009497|Vamp2|22318|vesicle-associated membrane protein 2	BC039745|Vamp2|22318|vesicle-associated membrane protein 2	U60150|Vamp2|22318|vesicle-associated membrane protein 2
mm9_v1_chr19_+_29064837_29064856	0.629	PAX2.p2	AK016651|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK076231|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK078468|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK165398|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1
mm9_v1_chr4_-_117559821_117559851	0.627062	PAX2.p2	AK200953|Atp6v0b|114143|ATPase, H+ transporting, lysosomal V0 subunit B
mm9_v1_chr6_+_137683745_137683761	0.626916	PAX2.p2	AK152283|Strap|20901|serine/threonine kinase receptor associated protein
mm9_v1_chr5_+_98683202_98683430	0.626512	PAX2.p2	AK028894|Fgf5|14176|fibroblast growth factor 5	NM_010203|Fgf5|14176|fibroblast growth factor 5	BC071227|Fgf5|14176|fibroblast growth factor 5	AK028694|Fgf5|14176|fibroblast growth factor 5	AB016516|Fgf5|14176|fibroblast growth factor 5	M30643|Fgf5|14176|fibroblast growth factor 5
mm9_v1_chr4_-_154417257_154417310	0.626287	PAX2.p2	AK049970|Plch2|269615|phospholipase C, eta 2
mm9_v1_chr2_-_163470826_163470836	0.62302	PAX2.p2	BC011295|Serinc3|26943|serine incorporator 3
mm9_v1_chr10_-_81090064_81090088	0.620811	PAX2.p2	AK145929|Sirt6|50721|sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)	NM_001163430|Sirt6|50721|sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)
mm9_v1_chr1_-_75206018_75206068	0.61821	PAX2.p2	BC021773|Glb1l|74577|galactosidase, beta 1-like	AK014667|Glb1l|74577|galactosidase, beta 1-like
mm9_v1_chr13_-_64471609_64471618	0.617573	PAX2.p2	AK011589|Ctsl|13039|cathepsin L	AK147142|Ctsl|13039|cathepsin L	AK002221|Ctsl|13039|cathepsin L	AK049466|Ctsl|13039|cathepsin L	AK145051|Ctsl|13039|cathepsin L	AK150452|Ctsl|13039|cathepsin L	AK151169|Ctsl|13039|cathepsin L	AK153076|Ctsl|13039|cathepsin L	AK153417|Ctsl|13039|cathepsin L	AK159511|Ctsl|13039|cathepsin L	AK160100|Ctsl|13039|cathepsin L	AK161538|Ctsl|13039|cathepsin L	AK165397|Ctsl|13039|cathepsin L	AK169394|Ctsl|13039|cathepsin L	NM_009984|Ctsl|13039|cathepsin L	AK169712|Ctsl|13039|cathepsin L
mm9_v1_chr11_-_86570918_86571097	0.616731	PAX2.p2	AK158438|Cltc|67300|clathrin, heavy polypeptide (Hc)	BC079897|Cltc|67300|clathrin, heavy polypeptide (Hc)	NM_001003908|Cltc|67300|clathrin, heavy polypeptide (Hc)	AK171732|Cltc|67300|clathrin, heavy polypeptide (Hc)	AK156869|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr2_+_128891655_128891754	0.616641	PAX2.p2	NM_027192|Ttl|69737|tubulin tyrosine ligase	BC024414|Ttl|69737|tubulin tyrosine ligase	AK084377|Ttl|69737|tubulin tyrosine ligase
mm9_v1_chr10_-_80052984_80053104	0.615203	PAX2.p2	BC005632|Fam108a|216169|family with sequence similarity 108, member A	BC082997|Fam108a|216169|family with sequence similarity 108, member A	AK170785|Fam108a|216169|family with sequence similarity 108, member A	NM_145421|Fam108a|216169|family with sequence similarity 108, member A
mm9_v1_chr2_+_158492854_158492905	0.612677	PAX2.p2	AK044453|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	NM_001159662|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC054764|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC057542|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AF423761|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AK042123|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm9_v1_chr11_-_120479218_120479273	0.612166	PAX2.p2	AK166319|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	AK140458|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	AK144544|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine
mm9_v1_chr2_-_60122146_60122212	0.610926	PAX2.p2	AK002812|Cd302|66205|CD302 antigen
mm9_v1_chr10_-_126648509_126648683	0.608717	PAX2.p2	BC021383|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AB054591|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AK148299|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AK140079|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	NM_054097|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm9_v1_chr15_+_99556127_99556246	0.605357	PAX2.p2	BC092142|2310016M24Rik|66379|RIKEN cDNA 2310016M24 gene	AK002816|2310016M24Rik|66379|RIKEN cDNA 2310016M24 gene	AK004378|2310016M24Rik|66379|RIKEN cDNA 2310016M24 gene
mm9_v1_chr17_+_44215851_44215893	0.604504	PAX2.p2	AK220510|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	BC138977|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	BC138978|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5	BC145484|Enpp5|83965|ectonucleotide pyrophosphatase/phosphodiesterase 5
mm9_v1_chr11_-_72303447_72303476	0.603923	PAX2.p2	AK156007|Spns2|216892|spinster homolog 2 (Drosophila)
mm9_v1_chr8_+_125135519_125135565	0.603066	PAX2.p2	NM_021502|Trappc2l|59005|trafficking protein particle complex 2-like	AB030200|Trappc2l|59005|trafficking protein particle complex 2-like	BC028502|Trappc2l|59005|trafficking protein particle complex 2-like	AK007526|Trappc2l|59005|trafficking protein particle complex 2-like	BC114968|Trappc2l|59005|trafficking protein particle complex 2-like
mm9_v1_chr11_+_53164518_53164596	0.602016	PAX2.p2	BC138999|Aff4|93736|AF4/FMR2 family, member 4	BC145490|Aff4|93736|AF4/FMR2 family, member 4
mm9_v1_chr14_-_56503058_56503074	0.601165	PAX2.p2	AK081085|Cbln3|56410|cerebellin 3 precursor protein	AF218379|Cbln3|56410|cerebellin 3 precursor protein
mm9_v1_chr3_-_85946515_85946517	0.599792	PAX2.p2	AK135318|Rps3a|20091|ribosomal protein S3A	AK151429|Rps3a|20091|ribosomal protein S3A	AK167512|Rps3a|20091|ribosomal protein S3A
mm9_v1_chr15_+_85889141_85889301	0.599636	PAX2.p2	BC085148|Gramd4|223752|GRAM domain containing 4	AK142266|Gramd4|223752|GRAM domain containing 4
mm9_v1_chr2_+_119420031_119420077	0.597898	PAX2.p2	AK017100|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK147270|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK009929|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK006166|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK011848|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK170765|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK029148|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	BC026913|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK011393|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK017322|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK030275|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene
mm9_v1_chr5_-_137974398_137974535	0.595117	PAX2.p2	BC062178|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK002604|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK151628|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	NM_010312|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	Y11970|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK146941|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2
mm9_v1_chr18_+_78135191_78135231	0.594598	PAX2.p2	NM_001195633|5430411K18Rik|100502841|RIKEN cDNA 5430411K18 gene
mm9_v1_chr11_+_115891591_115891668	0.594216	PAX2.p2	AK077635|Unk|217331|unkempt homolog (Drosophila)	AK046395|Unk|217331|unkempt homolog (Drosophila)	NM_172569|Unk|217331|unkempt homolog (Drosophila)	AK078095|Unk|217331|unkempt homolog (Drosophila)	AK129438|Unk|217331|unkempt homolog (Drosophila)
mm9_v1_chr6_-_85283412_85283433	0.592304	PAX2.p2	AK036285|Sfxn5|94282|sideroflexin 5	AK043706|Sfxn5|94282|sideroflexin 5	AK082073|Sfxn5|94282|sideroflexin 5	AK038793|Sfxn5|94282|sideroflexin 5	NM_178639|Sfxn5|94282|sideroflexin 5
mm9_v1_chr11_-_79067893_79067979	0.591568	PAX2.p2	AF033186|Wsb1|78889|WD repeat and SOCS box-containing 1	BC053391|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr9_-_83699706_83699913	0.590348	PAX2.p2	AF277093|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	AK029065|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	BC037030|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	NM_001145974|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	AK030666|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	NM_148941|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4
mm9_v1_chr19_-_6984433_6984519	0.588791	PAX2.p2	AB041573|Prdx5|54683|peroxiredoxin 5	BC008174|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr2_-_163470841_163470868	0.588139	PAX2.p2	BC029026|Serinc3|26943|serine incorporator 3	BC029980|Serinc3|26943|serine incorporator 3	AK031101|Serinc3|26943|serine incorporator 3
mm9_v1_chr17_+_24987499_24987611	0.587881	PAX2.p2	AK150557|Hagh|14651|hydroxyacyl glutathione hydrolase	AK151231|Hagh|14651|hydroxyacyl glutathione hydrolase	AK152742|Hagh|14651|hydroxyacyl glutathione hydrolase	AK165777|Hagh|14651|hydroxyacyl glutathione hydrolase	BC019817|Hagh|14651|hydroxyacyl glutathione hydrolase	NM_001159626|Hagh|14651|hydroxyacyl glutathione hydrolase
mm9_v1_chr8_+_36650839_36650928	0.584378	PAX2.p2	BC082308|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1	NM_001081279|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr3_-_126865105_126865154	0.581282	PAX2.p2	AK081244|Ank2|109676|ankyrin 2, brain
mm9_v1_chrX_-_156576312_156576363	0.579961	PAX2.p2	AK168152|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	AK169289|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	AK145718|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1
mm9_v1_chr11_-_120479112_120479215	0.57984	PAX2.p2	AK144379|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	BC003473|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	BC008276|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine	NM_024229|Pcyt2|68671|phosphate cytidylyltransferase 2, ethanolamine
mm9_v1_chr9_+_43875103_43875168	0.57968	PAX2.p2	NM_198092|Usp2|53376|ubiquitin specific peptidase 2	AK138799|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr17_-_45729199_45729441	0.579342	PAX2.p2	EU180577|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	BC006812|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AF131212|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	NM_022880|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr2_-_164658954_164659095	0.579104	PAX2.p2	AK004524|Neurl2|415115|neuralized-like 2 (Drosophila)	NM_001082974|Neurl2|415115|neuralized-like 2 (Drosophila)
mm9_v1_chr19_+_22522646_22522721	0.578614	PAX2.p2	AK044454|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_177341|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	BC141400|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	BC141412|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr7_+_117161753_117161793	0.577623	PAX2.p2	AK039534|Ipo7|233726|importin 7	AK053498|Ipo7|233726|importin 7
mm9_v1_chr19_+_21727662_21727704	0.576636	PAX2.p2	AK050879|Fam108b|226016|family with sequence similarity 108, member B
mm9_v1_chr19_+_45005608_45005655	0.576513	PAX2.p2	NM_001081225|Fam178a|226151|family with sequence similarity 178, member A	AK031688|Fam178a|226151|family with sequence similarity 178, member A	AK147588|Fam178a|226151|family with sequence similarity 178, member A	AK020064|Fam178a|226151|family with sequence similarity 178, member A	AK045983|Fam178a|226151|family with sequence similarity 178, member A
mm9_v1_chrX_+_131291100_131291196	0.57422	PAX2.p2	NM_027870|Armcx3|71703|armadillo repeat containing, X-linked 3	AK030729|Armcx3|71703|armadillo repeat containing, X-linked 3	AK004598|Armcx3|71703|armadillo repeat containing, X-linked 3	BC051113|Armcx3|71703|armadillo repeat containing, X-linked 3	BC108360|Armcx3|71703|armadillo repeat containing, X-linked 3
mm9_v1_chr16_+_55973916_55973970	0.574014	PAX2.p2	NM_173026|Zbtb11|271377|zinc finger and BTB domain containing 11
mm9_v1_chr2_+_112295120_112295230	0.572903	PAX2.p2	NM_133749|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC080668|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AJ250345|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AJ278128|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK088738|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK013744|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC115477|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	BC115478|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene	AK182314|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene
mm9_v1_chr10_+_80599284_80599377	0.572411	PAX2.p2	AK149961|Zbtb7a|16969|zinc finger and BTB domain containing 7a	AK154907|Zbtb7a|16969|zinc finger and BTB domain containing 7a	AK157664|Zbtb7a|16969|zinc finger and BTB domain containing 7a	BC057204|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr15_-_31460752_31460820	0.568772	PAX2.p2	AK132461|March6|223455|membrane-associated ring finger (C3HC4) 6	AK089827|March6|223455|membrane-associated ring finger (C3HC4) 6	NM_172606|March6|223455|membrane-associated ring finger (C3HC4) 6
mm9_v1_chr3_-_88229007_88229060	0.567773	PAX2.p2	BC052771|Slc25a44|229517|solute carrier family 25, member 44	AK166331|Slc25a44|229517|solute carrier family 25, member 44	AK169886|Slc25a44|229517|solute carrier family 25, member 44	AK044648|Slc25a44|229517|solute carrier family 25, member 44	AK046586|Slc25a44|229517|solute carrier family 25, member 44	AK079532|Slc25a44|229517|solute carrier family 25, member 44	AK165159|Slc25a44|229517|solute carrier family 25, member 44	AK083470|Slc25a44|229517|solute carrier family 25, member 44	AK083273|Slc25a44|229517|solute carrier family 25, member 44	AK144731|Slc25a44|229517|solute carrier family 25, member 44	AK166011|Slc25a44|229517|solute carrier family 25, member 44	AK168955|Slc25a44|229517|solute carrier family 25, member 44	AK032960|Slc25a44|229517|solute carrier family 25, member 44	AK134914|Slc25a44|229517|solute carrier family 25, member 44	NM_001145876|Slc25a44|229517|solute carrier family 25, member 44	NM_001145877|Slc25a44|229517|solute carrier family 25, member 44	NM_178696|Slc25a44|229517|solute carrier family 25, member 44
mm9_v1_chr11_-_60590796_60590866	0.567636	PAX2.p2	AB006074|Top3a|21975|topoisomerase (DNA) III alpha	NM_009410|Top3a|21975|topoisomerase (DNA) III alpha
mm9_v1_chr8_+_3500470_3500545	0.567505	PAX2.p2	AK032531|Mcoln1|94178|mucolipin 1	AK038594|Mcoln1|94178|mucolipin 1	AK034471|Mcoln1|94178|mucolipin 1	AK049606|Mcoln1|94178|mucolipin 1	BC005651|Mcoln1|94178|mucolipin 1	NM_053177|Mcoln1|94178|mucolipin 1	AF302009|Mcoln1|94178|mucolipin 1	AK028385|Mcoln1|94178|mucolipin 1
mm9_v1_chr4_-_149148173_149148404	0.566517	PAX2.p2	AK017628|Slc25a33|70556|solute carrier family 25, member 33	BC011293|Slc25a33|70556|solute carrier family 25, member 33	AK157423|Slc25a33|70556|solute carrier family 25, member 33	NM_027460|Slc25a33|70556|solute carrier family 25, member 33
mm9_v1_chr4_-_33335457_33335484	0.566233	PAX2.p2	AK159693|Pnrc1|108767|proline-rich nuclear receptor coactivator 1	AK087995|Pnrc1|108767|proline-rich nuclear receptor coactivator 1	AK160284|Pnrc1|108767|proline-rich nuclear receptor coactivator 1
mm9_v1_chr5_+_110973321_110973404	0.565734	PAX2.p2	NM_198306|Galnt9|231605|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9	AK032568|Galnt9|231605|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9
mm9_v1_chr2_-_163470787_163470825	0.564991	PAX2.p2	AB029499|Serinc3|26943|serine incorporator 3	AF181684|Serinc3|26943|serine incorporator 3	BC022901|Serinc3|26943|serine incorporator 3	AK170350|Serinc3|26943|serine incorporator 3	AK152720|Serinc3|26943|serine incorporator 3	AK159347|Serinc3|26943|serine incorporator 3	AK150106|Serinc3|26943|serine incorporator 3	AK155921|Serinc3|26943|serine incorporator 3	AK159488|Serinc3|26943|serine incorporator 3	AK159819|Serinc3|26943|serine incorporator 3	AK160005|Serinc3|26943|serine incorporator 3	AK160055|Serinc3|26943|serine incorporator 3	AK161981|Serinc3|26943|serine incorporator 3	AK164807|Serinc3|26943|serine incorporator 3	AK166924|Serinc3|26943|serine incorporator 3	AK145604|Serinc3|26943|serine incorporator 3
mm9_v1_chr7_+_99890204_99890223	0.564193	PAX2.p2	AK142206|Rab30|75985|RAB30, member RAS oncogene family	BC017550|Rab30|75985|RAB30, member RAS oncogene family	NM_029494|Rab30|75985|RAB30, member RAS oncogene family
mm9_v1_chr6_+_124881437_124881453	0.563694	PAX2.p2	AK141241|Mlf2|30853|myeloid leukemia factor 2	AK143972|Mlf2|30853|myeloid leukemia factor 2
mm9_v1_chr14_-_45839064_45839076	0.562995	PAX2.p2	AK039945|Txndc16|70561|thioredoxin domain containing 16	AK046466|Txndc16|70561|thioredoxin domain containing 16	NM_172597|Txndc16|70561|thioredoxin domain containing 16	BC060101|Txndc16|70561|thioredoxin domain containing 16	AK164111|Txndc16|70561|thioredoxin domain containing 16
mm9_v1_chr1_-_132612309_132612397	0.562966	PAX2.p2	X98847|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	BC051014|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	BC018418|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	AK146744|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	NM_008825|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr12_+_8928949_8929068	0.562934	PAX2.p2	
mm9_v1_chr1_-_64167952_64168022	0.56045	PAX2.p2	BC019604|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	NM_033563|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC004700|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC040794|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AF338369|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK149362|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr8_-_73397377_73397396	0.557955	PAX2.p2	AK088037|Ccdc124|234388|coiled-coil domain containing 124	AK007589|Ccdc124|234388|coiled-coil domain containing 124	BC049678|Ccdc124|234388|coiled-coil domain containing 124	NM_026964|Ccdc124|234388|coiled-coil domain containing 124
mm9_v1_chr16_+_20672890_20672931	0.556048	PAX2.p2	AK150050|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066103|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC079675|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr7_-_51808828_51809055	0.555752	PAX2.p2	BC106148|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	U09419|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2
mm9_v1_chrX_+_7299332_7299351	0.5552	PAX2.p2	AK018409|Wdr45|54636|WD repeat domain 45
mm9_v1_chr8_-_17535279_17535384	0.555034	PAX2.p2	AY017475|Csmd1|94109|CUB and Sushi multiple domains 1	AK038679|Csmd1|94109|CUB and Sushi multiple domains 1	AK048698|Csmd1|94109|CUB and Sushi multiple domains 1	AK134585|Csmd1|94109|CUB and Sushi multiple domains 1	NM_053171|Csmd1|94109|CUB and Sushi multiple domains 1
mm9_v1_chr4_-_115747643_115747689	0.554479	PAX2.p2	AK012552|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK018712|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	NM_025641|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr10_-_53795485_53795553	0.554305	PAX2.p2	AK186378|Man1a|17155|mannosidase 1, alpha	BC015265|Man1a|17155|mannosidase 1, alpha	AK028996|Man1a|17155|mannosidase 1, alpha	AK042371|Man1a|17155|mannosidase 1, alpha	AK148407|Man1a|17155|mannosidase 1, alpha	AK154820|Man1a|17155|mannosidase 1, alpha	AK171841|Man1a|17155|mannosidase 1, alpha	AK043932|Man1a|17155|mannosidase 1, alpha	AK172376|Man1a|17155|mannosidase 1, alpha	AK172667|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr3_-_37623250_37623411	0.552561	PAX2.p2	AK039231|Gm5148|381438|predicted gene 5148	AK039519|Gm5148|381438|predicted gene 5148	AK039710|Gm5148|381438|predicted gene 5148	NM_198657|Gm5148|381438|predicted gene 5148	AK045832|Gm5148|381438|predicted gene 5148
mm9_v1_chr10_-_17954752_17954810	0.551565	PAX2.p2	AK028075|Ccdc28a|215814|coiled-coil domain containing 28A	BC013553|Ccdc28a|215814|coiled-coil domain containing 28A	BC027759|Ccdc28a|215814|coiled-coil domain containing 28A	AK148447|Ccdc28a|215814|coiled-coil domain containing 28A	NM_144820|Ccdc28a|215814|coiled-coil domain containing 28A
mm9_v1_chr9_+_70526985_70526997	0.547221	PAX2.p2	AF011379|Adam10|11487|a disintegrin and metallopeptidase domain 10
mm9_v1_chr6_+_49772688_49772727	0.546008	PAX2.p2	AK002982|Npy|109648|neuropeptide Y	BC043012|Npy|109648|neuropeptide Y	NM_023456|Npy|109648|neuropeptide Y
mm9_v1_chr5_-_92391581_92391802	0.544882	PAX2.p2	AK015870|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AF305423|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AK084295|Thap6|381650|THAP domain containing 6	AK018364|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AF276959|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AF071222|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AK018488|Rchy1|68098|ring finger and CHY zinc finger domain containing 1
mm9_v1_chr11_-_61267383_61267510	0.544238	PAX2.p2	AB013097|Rnf112|22671|ring finger protein 112	BC013139|Rnf112|22671|ring finger protein 112	NM_009548|Rnf112|22671|ring finger protein 112	BC037118|Rnf112|22671|ring finger protein 112	AK131651|Rnf112|22671|ring finger protein 112
mm9_v1_chr9_-_64101138_64101232	0.543086	PAX2.p2	L02526|Map2k1|26395|mitogen-activated protein kinase kinase 1	BC054754|Map2k1|26395|mitogen-activated protein kinase kinase 1	BC051137|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr5_-_148537561_148537595	0.54251	PAX2.p2	X78568|Flt1|14254|FMS-like tyrosine kinase 1	D88689|Flt1|14254|FMS-like tyrosine kinase 1	D88690|Flt1|14254|FMS-like tyrosine kinase 1	NM_010228|Flt1|14254|FMS-like tyrosine kinase 1	AK005502|Flt1|14254|FMS-like tyrosine kinase 1	AK013236|Flt1|14254|FMS-like tyrosine kinase 1	AK167596|Flt1|14254|FMS-like tyrosine kinase 1	AK146906|Flt1|14254|FMS-like tyrosine kinase 1
mm9_v1_chr6_-_7643156_7643286	0.542481	PAX2.p2	AK167933|Asns|27053|asparagine synthetase	AK167524|Asns|27053|asparagine synthetase	BC005552|Asns|27053|asparagine synthetase	NM_012055|Asns|27053|asparagine synthetase	U38940|Asns|27053|asparagine synthetase	AK160459|Asns|27053|asparagine synthetase	AK076207|Asns|27053|asparagine synthetase
mm9_v1_chr19_-_6915038_6915131	0.542128	PAX2.p2	AK195314|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AF074714|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	NM_019924|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK089467|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK154674|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	BC012964|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4
mm9_v1_chr10_+_122116022_122116053	0.541032	PAX2.p2	
mm9_v1_chr5_-_69732915_69732947	0.538647	PAX2.p2	AK039167|Kctd8|243043|potassium channel tetramerisation domain containing 8	AK043351|Kctd8|243043|potassium channel tetramerisation domain containing 8	AK047519|Kctd8|243043|potassium channel tetramerisation domain containing 8	AY615967|Kctd8|243043|potassium channel tetramerisation domain containing 8	NM_175519|Kctd8|243043|potassium channel tetramerisation domain containing 8
mm9_v1_chr14_-_78936576_78936588	0.537697	PAX2.p2	AK158300|Akap11|219181|A kinase (PRKA) anchor protein 11
mm9_v1_chrX_+_71002395_71002441	0.535021	PAX2.p2	AK138168|Plxnb3|140571|plexin B3	AK138631|Plxnb3|140571|plexin B3	AK140240|Plxnb3|140571|plexin B3	NM_019587|Plxnb3|140571|plexin B3
mm9_v1_chr2_+_113839219_113839495	0.534487	PAX2.p2	AK082668|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK045761|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK043120|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK044743|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK046235|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene	AK045885|A530058N18Rik|320846|RIKEN cDNA A530058N18 gene
mm9_v1_chr11_+_60351159_60351225	0.533835	PAX2.p2	NM_172943|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)
mm9_v1_chr8_-_122099088_122099101	0.533691	PAX2.p2	NM_175185|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
mm9_v1_chr19_+_10057131_10057449	0.533494	PAX2.p2	AK147082|Fth1|14319|ferritin heavy chain 1	AK150679|Fth1|14319|ferritin heavy chain 1	AK153195|Fth1|14319|ferritin heavy chain 1	AK153199|Fth1|14319|ferritin heavy chain 1	AK151241|Fth1|14319|ferritin heavy chain 1	AK152542|Fth1|14319|ferritin heavy chain 1	NM_010239|Fth1|14319|ferritin heavy chain 1	AK027998|Fth1|14319|ferritin heavy chain 1	AK088935|Fth1|14319|ferritin heavy chain 1	AK139622|Fth1|14319|ferritin heavy chain 1	AK150262|Fth1|14319|ferritin heavy chain 1	AK150508|Fth1|14319|ferritin heavy chain 1	AK150628|Fth1|14319|ferritin heavy chain 1	AK150693|Fth1|14319|ferritin heavy chain 1	AK151192|Fth1|14319|ferritin heavy chain 1	AK151609|Fth1|14319|ferritin heavy chain 1	AK151675|Fth1|14319|ferritin heavy chain 1	AK152071|Fth1|14319|ferritin heavy chain 1	AK153017|Fth1|14319|ferritin heavy chain 1	AK168601|Fth1|14319|ferritin heavy chain 1	AK169004|Fth1|14319|ferritin heavy chain 1	AK159243|Fth1|14319|ferritin heavy chain 1	AK151399|Fth1|14319|ferritin heavy chain 1	BC011096|Fth1|14319|ferritin heavy chain 1	BC012314|Fth1|14319|ferritin heavy chain 1	J03941|Fth1|14319|ferritin heavy chain 1	M24509|Fth1|14319|ferritin heavy chain 1	X12812|Fth1|14319|ferritin heavy chain 1
mm9_v1_chr1_-_67085155_67085378	0.532817	PAX2.p2	AK182687|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	AK186065|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1	AK210427|Lancl1|14768|LanC (bacterial lantibiotic synthetase component C)-like 1
mm9_v1_chr16_+_49699314_49699432	0.53234	PAX2.p2	DQ266091|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AF274590|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK047217|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	NM_028680|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK014731|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138143|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138144|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)
mm9_v1_chr13_-_48720824_48720904	0.529595	PAX2.p2	AK053480|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1
mm9_v1_chr4_+_155068604_155068624	0.528422	PAX2.p2	AK048841|B930041F14Rik|230991|RIKEN cDNA B930041F14 gene	BC147231|B930041F14Rik|230991|RIKEN cDNA B930041F14 gene	BC147232|B930041F14Rik|230991|RIKEN cDNA B930041F14 gene
mm9_v1_chr5_-_124022937_124023057	0.527274	PAX2.p2	AK194964|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AF439858|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK019463|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK140553|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150282|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150550|Vps33a|77573|vacuolar protein sorting 33A (yeast)	BC046417|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK041982|Vps33a|77573|vacuolar protein sorting 33A (yeast)	NM_029929|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr12_+_85792371_85792472	0.525197	PAX2.p2	BC120496|Lin52|217708|lin-52 homolog (C. elegans)	BC137693|Lin52|217708|lin-52 homolog (C. elegans)	AK030923|Lin52|217708|lin-52 homolog (C. elegans)	NM_173756|Lin52|217708|lin-52 homolog (C. elegans)
mm9_v1_chr6_+_29417738_29417806	0.524952	PAX2.p2	AK152929|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK007327|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	NM_025381|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK003419|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK152153|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK152959|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F
mm9_v1_chr7_+_17038265_17038424	0.524869	PAX2.p2	AK007386|Tmem160|69094|transmembrane protein 160	AK088338|Tmem160|69094|transmembrane protein 160	AK166985|Tmem160|69094|transmembrane protein 160
mm9_v1_chr17_+_21082459_21082491	0.524629	PAX2.p2	AB021743|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
mm9_v1_chr10_-_128360523_128360595	0.524264	PAX2.p2	BC034662|Bloc1s1|14533|biogenesis of lysosome-related organelles complex-1, subunit 1	AK013629|Bloc1s1|14533|biogenesis of lysosome-related organelles complex-1, subunit 1	AK003035|Bloc1s1|14533|biogenesis of lysosome-related organelles complex-1, subunit 1	NM_015740|Bloc1s1|14533|biogenesis of lysosome-related organelles complex-1, subunit 1
mm9_v1_chr1_-_64167818_64167853	0.523798	PAX2.p2	AF327568|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr2_-_30141839_30141875	0.521758	PAX2.p2	AK077581|Dolk|227697|dolichol kinase	AK144705|Dolk|227697|dolichol kinase	NM_177648|Dolk|227697|dolichol kinase
mm9_v1_chr12_-_103981869_103981884	0.520648	PAX2.p2	NM_001142937|Moap1|64113|modulator of apoptosis 1	NM_022323|Moap1|64113|modulator of apoptosis 1
mm9_v1_chr14_-_47006944_47006954	0.519015	PAX2.p2	BC052846|Bmp4|12159|bone morphogenetic protein 4
mm9_v1_chr1_-_121401236_121401390	0.518821	PAX2.p2	AK159993|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	AF174296|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	NM_022327|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)
mm9_v1_chr15_-_36724008_36724060	0.517994	PAX2.p2	AK083368|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr7_+_53039273_53039322	0.516564	PAX2.p2	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr4_+_134024234_134024333	0.514866	PAX2.p2	NM_019641|Stmn1|16765|stathmin 1	AB064953|Stmn1|16765|stathmin 1	AK002606|Stmn1|16765|stathmin 1	AK012231|Stmn1|16765|stathmin 1	AK012347|Stmn1|16765|stathmin 1	AK014108|Stmn1|16765|stathmin 1	AK088628|Stmn1|16765|stathmin 1	AK013302|Stmn1|16765|stathmin 1	BC010581|Stmn1|16765|stathmin 1	BC031831|Stmn1|16765|stathmin 1	BC054396|Stmn1|16765|stathmin 1
mm9_v1_chr4_+_21775172_21775224	0.51347	PAX2.p2	AK162695|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK012036|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK031964|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK017507|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK020035|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK081407|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK083021|Sfrs18|66625|serine/arginine-rich splicing factor 18	AK160288|Sfrs18|66625|serine/arginine-rich splicing factor 18	BC060111|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr17_+_36116868_36116882	0.511983	PAX2.p2	BC013243|Gnl1|14670|guanine nucleotide binding protein-like 1
mm9_v1_chr10_+_106708886_106708980	0.511854	PAX2.p2	NM_001033223|Lin7a|108030|lin-7 homolog A (C. elegans)	NM_001039354|Lin7a|108030|lin-7 homolog A (C. elegans)	BC105965|Lin7a|108030|lin-7 homolog A (C. elegans)	AK160671|Lin7a|108030|lin-7 homolog A (C. elegans)	BC029721|Lin7a|108030|lin-7 homolog A (C. elegans)
mm9_v1_chr17_+_34974118_34974132	0.511764	PAX2.p2	
mm9_v1_chr17_+_74888823_74888973	0.509826	PAX2.p2	AK166347|Yipf4|67864|Yip1 domain family, member 4	AK009618|Yipf4|67864|Yip1 domain family, member 4	AK083301|Yipf4|67864|Yip1 domain family, member 4	NM_026417|Yipf4|67864|Yip1 domain family, member 4	AK017721|Yipf4|67864|Yip1 domain family, member 4	AK017722|Yipf4|67864|Yip1 domain family, member 4	AK159227|Yipf4|67864|Yip1 domain family, member 4	BC003936|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr5_+_137729501_137729514	0.508433	PAX2.p2	AK042335|Ache|11423|acetylcholinesterase	NM_009599|Ache|11423|acetylcholinesterase	AK043748|Ache|11423|acetylcholinesterase	AK140404|Ache|11423|acetylcholinesterase	AK036259|Ache|11423|acetylcholinesterase	AK046080|Ache|11423|acetylcholinesterase	AK036443|Ache|11423|acetylcholinesterase
mm9_v1_chr16_-_22439642_22439745	0.507569	PAX2.p2	BC034680|Etv5|104156|ets variant gene 5	NM_023794|Etv5|104156|ets variant gene 5	AK031452|Etv5|104156|ets variant gene 5	AK168881|Etv5|104156|ets variant gene 5	AK049234|Etv5|104156|ets variant gene 5	AK164091|Etv5|104156|ets variant gene 5	AK018368|Etv5|104156|ets variant gene 5
mm9_v1_chr7_+_25292375_25292405	0.507395	PAX2.p2	AK139174|Zfp428|232969|zinc finger protein 428
mm9_v1_chr9_+_70055127_70055237	0.505035	PAX2.p2	AK009155|Myo1e|71602|myosin IE	AK009427|Myo1e|71602|myosin IE	AK029145|Myo1e|71602|myosin IE	NM_181072|Myo1e|71602|myosin IE	BC040786|Myo1e|71602|myosin IE	BC051391|Myo1e|71602|myosin IE
mm9_v1_chr14_-_47441795_47441916	0.504973	PAX2.p2	AB001732|Gmfb|63985|glia maturation factor, beta	BC040233|Gmfb|63985|glia maturation factor, beta	AB050013|Gmfb|63985|glia maturation factor, beta	BC049134|Gmfb|63985|glia maturation factor, beta	AK013970|Gmfb|63985|glia maturation factor, beta	AK013947|Gmfb|63985|glia maturation factor, beta	AF297220|Gmfb|63985|glia maturation factor, beta	AK142014|Gmfb|63985|glia maturation factor, beta	NM_022023|Gmfb|63985|glia maturation factor, beta
mm9_v1_chr2_+_167514460_167514473	0.503263	PAX2.p2	AK143374|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chr4_+_155068566_155068580	0.502786	PAX2.p2	AK047240|B930041F14Rik|230991|RIKEN cDNA B930041F14 gene	NM_178699|B930041F14Rik|230991|RIKEN cDNA B930041F14 gene
mm9_v1_chr14_+_56178853_56178921	0.501809	PAX2.p2	NM_133734|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK033540|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK170657|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK158784|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr6_+_124881472_124881500	0.501191	PAX2.p2	BC003975|Mlf2|30853|myeloid leukemia factor 2
mm9_v1_chr8_+_87560809_87560830	0.500618	PAX2.p2	AK154985|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	AK155760|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	NM_145390|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr10_+_114822009_114822046	0.499916	PAX2.p2	AK145652|Zfc3h1|216345|zinc finger, C3H1-type containing	NM_001033261|Zfc3h1|216345|zinc finger, C3H1-type containing
mm9_v1_chr15_-_77787128_77787170	0.498321	PAX2.p2	NM_001017983|Foxred2|239554|FAD-dependent oxidoreductase domain containing 2	NM_001168260|Foxred2|239554|FAD-dependent oxidoreductase domain containing 2
mm9_v1_chr17_-_33897193_33897231	0.497984	PAX2.p2	AB232606|Rab11b|19326|RAB11B, member RAS oncogene family	AK146978|Rab11b|19326|RAB11B, member RAS oncogene family	AK148106|Rab11b|19326|RAB11B, member RAS oncogene family
mm9_v1_chr11_-_101846064_101846112	0.497136	PAX2.p2	AF280809|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)	AK008734|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)	AK170772|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)	NM_028207|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)	BC016269|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
mm9_v1_chr7_+_31348317_31348374	0.495597	PAX2.p2	BC060972|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4	NM_170760|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4	BC051477|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4	AF419339|U2af1l4|233073|U2 small nuclear RNA auxiliary factor 1-like 4
mm9_v1_chr8_+_108225509_108225588	0.493114	PAX2.p2	BC061114|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	AK158848|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	NM_001047435|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	NM_019695|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	BC049593|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)	AK003030|Pard6a|56513|par-6 (partitioning defective 6,) homolog alpha (C. elegans)
mm9_v1_chr4_-_62021515_62021538	0.49205	PAX2.p2	BC137706|Fkbp15|338355|FK506 binding protein 15	AK049459|Fkbp15|338355|FK506 binding protein 15	AK082565|Fkbp15|338355|FK506 binding protein 15
mm9_v1_chrX_+_7418894_7418995	0.491901	PAX2.p2	BC016529|Otud5|54644|OTU domain containing 5	NM_138604|Otud5|54644|OTU domain containing 5	AK155131|Otud5|54644|OTU domain containing 5
mm9_v1_chr5_+_9266137_9266216	0.489978	PAX2.p2	AK079644|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK165601|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK081041|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK034358|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK045969|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK048738|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK133610|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	NM_172706|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	BC132290|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	BC138012|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene
mm9_v1_chr16_+_6349108_6349144	0.489401	PAX2.p2	AK134833|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr15_+_73555186_73555261	0.488356	PAX2.p2	AK004562|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr12_-_68323528_68323535	0.487416	PAX2.p2	AK034513|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	AK137667|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_001193266|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_207010|Mdga2|320772|MAM domain containing glycosylphosphatidylinositol anchor 2
mm9_v1_chr2_+_163245523_163245600	0.486245	PAX2.p2	AK013849|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene	AK020931|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene
mm9_v1_chr3_-_127540408_127540409	0.485872	PAX2.p2	NM_145964|Ap1ar|211556|adaptor-related protein complex 1 associated regulatory protein
mm9_v1_chr2_+_71624985_71625139	0.485347	PAX2.p2	AK018033|Itga6|16403|integrin alpha 6	BC049132|Itga6|16403|integrin alpha 6	BC058095|Itga6|16403|integrin alpha 6	X69902|Itga6|16403|integrin alpha 6	AK034186|Itga6|16403|integrin alpha 6	NM_008397|Itga6|16403|integrin alpha 6
mm9_v1_chr8_+_35217633_35217673	0.485336	PAX2.p2	BC022616|Tmem66|67887|transmembrane protein 66	AK093942|Tmem66|67887|transmembrane protein 66
mm9_v1_chr15_-_79518160_79518352	0.485299	PAX2.p2	AK004913|Josd1|74158|Josephin domain containing 1	NM_028792|Josd1|74158|Josephin domain containing 1	AK154799|Josd1|74158|Josephin domain containing 1
mm9_v1_chr11_+_31770920_31770944	0.482537	PAX2.p2	AK173229|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4
mm9_v1_chr2_+_140221165_140221195	0.482103	PAX2.p2	AK134694|Macrod2|72899|MACRO domain containing 2	NM_001013802|Macrod2|72899|MACRO domain containing 2	AK013491|Macrod2|72899|MACRO domain containing 2	NM_028387|Macrod2|72899|MACRO domain containing 2	AK011824|Macrod2|72899|MACRO domain containing 2	AK165589|Macrod2|72899|MACRO domain containing 2	AK029184|Macrod2|72899|MACRO domain containing 2	AK160433|Macrod2|72899|MACRO domain containing 2	AK004072|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr15_-_89306531_89306619	0.48111	PAX2.p2	BC011284|Arsa|11883|arylsulfatase A	AK029854|Arsa|11883|arylsulfatase A	AK165921|Arsa|11883|arylsulfatase A	AK004540|Arsa|11883|arylsulfatase A	AK132501|Arsa|11883|arylsulfatase A
mm9_v1_chr2_-_25316432_25316473	0.480854	PAX2.p2	AK046066|BC029214|227622|cDNA sequence BC029214
mm9_v1_chr5_+_139856534_139856673	0.480572	PAX2.p2	AK155280|Gpr146|80290|G protein-coupled receptor 146	AK154478|Gpr146|80290|G protein-coupled receptor 146	AK046512|Gpr146|80290|G protein-coupled receptor 146	AK089232|Gpr146|80290|G protein-coupled receptor 146	AK154708|Gpr146|80290|G protein-coupled receptor 146	AK155876|Gpr146|80290|G protein-coupled receptor 146	NM_030258|Gpr146|80290|G protein-coupled receptor 146	BC003323|Gpr146|80290|G protein-coupled receptor 146	AK050034|Gpr146|80290|G protein-coupled receptor 146	AK087100|Gpr146|80290|G protein-coupled receptor 146	AK155212|Gpr146|80290|G protein-coupled receptor 146
mm9_v1_chr2_-_5816381_5816442	0.479379	PAX2.p2	AK160602|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK077701|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	NM_021305|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr10_+_59165307_59165416	0.479358	PAX2.p2	AK083520|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK049521|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK050113|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK046049|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC026566|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK077605|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK029884|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK052485|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC018320|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC023022|Cbara1|216001|calcium binding atopy-related autoantigen 1	NM_144822|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK085553|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK051470|Cbara1|216001|calcium binding atopy-related autoantigen 1
mm9_v1_chr15_-_57723937_57723989	0.476958	PAX2.p2	AK152901|Derl1|67819|Der1-like domain family, member 1	AK148018|Derl1|67819|Der1-like domain family, member 1	AK152197|Derl1|67819|Der1-like domain family, member 1	AK043420|Derl1|67819|Der1-like domain family, member 1	NM_024207|Derl1|67819|Der1-like domain family, member 1	AK007435|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr11_-_45979836_45979862	0.476598	PAX2.p2	AK035736|Nipal4|214112|NIPA-like domain containing 4	BC139819|Nipal4|214112|NIPA-like domain containing 4	AK035561|Nipal4|214112|NIPA-like domain containing 4	NM_172524|Nipal4|214112|NIPA-like domain containing 4
mm9_v1_chr11_+_120459734_120459836	0.476492	PAX2.p2	NM_025389|Anapc11|66156|anaphase promoting complex subunit 11	AK158224|Anapc11|66156|anaphase promoting complex subunit 11	AK003612|Anapc11|66156|anaphase promoting complex subunit 11	AK045408|Anapc11|66156|anaphase promoting complex subunit 11	AK003244|Anapc11|66156|anaphase promoting complex subunit 11	AK136358|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr16_-_85015494_85015607	0.476316	PAX2.p2	AK209458|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr2_+_174171525_174171529	0.475764	PAX2.p2	AK187312|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK215851|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr17_+_24625709_24625729	0.473962	PAX2.p2	NM_027937|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr4_-_91038638_91038669	0.47264	PAX2.p2	BC046598|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr5_+_32761471_32761527	0.471353	PAX2.p2	AK171283|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK089067|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr2_+_71291369_71291427	0.471039	PAX2.p2	AK010067|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	NM_025633|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	AK005241|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	BC060739|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)
mm9_v1_chr7_+_31076771_31076772	0.469924	PAX2.p2	NM_001081114|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr11_+_117516047_117516132	0.469704	PAX2.p2	AK147471|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr3_-_20054974_20055043	0.469499	PAX2.p2	BC029903|Gyg|27357|glycogenin	AK159576|Gyg|27357|glycogenin	NM_013755|Gyg|27357|glycogenin
mm9_v1_chr2_+_178149238_178149258	0.468051	PAX2.p2	AK155442|9030418K01Rik|71532|RIKEN cDNA 9030418K01 gene	NM_001081289|9030418K01Rik|71532|RIKEN cDNA 9030418K01 gene
mm9_v1_chr6_-_122692526_122692557	0.466375	PAX2.p2	AK164286|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK028041|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK045328|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK147258|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr4_-_128798939_128798983	0.465412	PAX2.p2	NM_001130419|Hpca|15444|hippocalcin
mm9_v1_chr11_+_70658261_70658270	0.465198	PAX2.p2	AK134587|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	NM_019400|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1
mm9_v1_chr14_+_21895418_21895486	0.465172	PAX2.p2	AK160264|Adk|11534|adenosine kinase
mm9_v1_chr3_+_136333083_136333098	0.464323	PAX2.p2	AK146387|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr17_-_33897428_33897430	0.464256	PAX2.p2	NM_008997|Rab11b|19326|RAB11B, member RAS oncogene family
mm9_v1_chr16_+_18877129_18877328	0.46375	PAX2.p2	BC052856|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	BC060181|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)
mm9_v1_chr15_-_77787081_77787112	0.463653	PAX2.p2	BC086662|Foxred2|239554|FAD-dependent oxidoreductase domain containing 2	AK170795|Foxred2|239554|FAD-dependent oxidoreductase domain containing 2	AK140027|Foxred2|239554|FAD-dependent oxidoreductase domain containing 2	AK079870|Foxred2|239554|FAD-dependent oxidoreductase domain containing 2
mm9_v1_chr11_+_116938095_116938134	0.462244	PAX2.p2	AK012687|2810008D09Rik|76972|RIKEN cDNA 2810008D09 gene	AK171830|2810008D09Rik|76972|RIKEN cDNA 2810008D09 gene
mm9_v1_chr11_-_120442681_120442848	0.461756	PAX2.p2	AK211513|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr17_+_24987445_24987498	0.461407	PAX2.p2	AK147022|Hagh|14651|hydroxyacyl glutathione hydrolase	BC004749|Hagh|14651|hydroxyacyl glutathione hydrolase
mm9_v1_chr17_+_21082444_21082447	0.461187	PAX2.p2	AK088776|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
mm9_v1_chr10_+_66559194_66559239	0.461025	PAX2.p2	AK140633|Jmjd1c|108829|jumonji domain containing 1C
mm9_v1_chr7_-_28231535_28231646	0.460486	PAX2.p2	AK006254|Spnb4|80297|spectrin beta 4	AB055618|Spnb4|80297|spectrin beta 4	NM_032610|Spnb4|80297|spectrin beta 4	AK147558|Spnb4|80297|spectrin beta 4
mm9_v1_chr17_+_53618542_53618596	0.459793	PAX2.p2	AK081999|Rab5a|271457|RAB5A, member RAS oncogene family	NM_025887|Rab5a|271457|RAB5A, member RAS oncogene family	AK076093|Rab5a|271457|RAB5A, member RAS oncogene family	BC096481|Rab5a|271457|RAB5A, member RAS oncogene family
mm9_v1_chr9_-_110379093_110379197	0.459562	PAX2.p2	BC065167|Klhl18|270201|kelch-like 18 (Drosophila)	BC025563|Klhl18|270201|kelch-like 18 (Drosophila)	AK173029|Klhl18|270201|kelch-like 18 (Drosophila)	NM_177771|Klhl18|270201|kelch-like 18 (Drosophila)
mm9_v1_chrX_+_71032421_71032564	0.459279	PAX2.p2	AK142600|Ssr4|20832|signal sequence receptor, delta	NM_009279|Ssr4|20832|signal sequence receptor, delta	AK003044|Ssr4|20832|signal sequence receptor, delta	AK160089|Ssr4|20832|signal sequence receptor, delta	AK013723|Ssr4|20832|signal sequence receptor, delta	BC012971|Ssr4|20832|signal sequence receptor, delta	AK007921|Ssr4|20832|signal sequence receptor, delta	BC019419|Ssr4|20832|signal sequence receptor, delta	BC008172|Ssr4|20832|signal sequence receptor, delta
mm9_v1_chr17_-_56749096_56749193	0.459066	PAX2.p2	BC056164|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	BC049674|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AK075942|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AY091637|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AK075961|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	NM_153152|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene
mm9_v1_chr6_+_129483154_129483185	0.457441	PAX2.p2	AK168921|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AF180518|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AB041648|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr2_-_48804794_48804803	0.456367	PAX2.p2	AK145454|Orc4|26428|origin recognition complex, subunit 4
mm9_v1_chr4_-_70195952_70195978	0.455227	PAX2.p2	AK122378|Megf9|230316|multiple EGF-like-domains 9	AK035987|Megf9|230316|multiple EGF-like-domains 9	AK039319|Megf9|230316|multiple EGF-like-domains 9	AK162891|Megf9|230316|multiple EGF-like-domains 9	NM_172694|Megf9|230316|multiple EGF-like-domains 9	AK170687|Megf9|230316|multiple EGF-like-domains 9
mm9_v1_chr10_+_96945972_96946140	0.453287	PAX2.p2	BC060126|Dcn|13179|decorin	Y11757|Dcn|13179|decorin
mm9_v1_chr11_+_49057692_49057775	0.453176	PAX2.p2	NM_001110148|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	NM_010794|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	BC031752|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr17_-_29484848_29484909	0.453169	PAX2.p2	AF176007|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)	AF192558|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)	NM_019880|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)
mm9_v1_chr4_-_124527811_124527973	0.452766	PAX2.p2	NM_001142727|1110065P20Rik|68920|RIKEN cDNA 1110065P20 gene
mm9_v1_chr11_-_75993134_75993143	0.451707	PAX2.p2	AK009586|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK009727|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK009818|Vps53|68299|vacuolar protein sorting 53 (yeast)
mm9_v1_chr9_-_53475167_53475249	0.450973	PAX2.p2	AK014894|Cul5|75717|cullin 5	BC037054|Cul5|75717|cullin 5
mm9_v1_chr16_-_30388858_30388938	0.45076	PAX2.p2	
mm9_v1_chr19_-_11893333_11893421	0.449103	PAX2.p2	D29799|Stx3|20908|syntaxin 3	NM_011502|Stx3|20908|syntaxin 3	AK038415|Stx3|20908|syntaxin 3	AK133830|Stx3|20908|syntaxin 3
mm9_v1_chr2_-_29980091_29980130	0.448736	PAX2.p2	AK032153|Zer1|227693|zer-1 homolog (C. elegans)	AK029290|Zer1|227693|zer-1 homolog (C. elegans)
mm9_v1_chr2_+_29821079_29821243	0.448566	PAX2.p2	NM_001076554|Spna2|20740|spectrin alpha 2	NM_001177667|Spna2|20740|spectrin alpha 2	NM_001177668|Spna2|20740|spectrin alpha 2	AK037683|Spna2|20740|spectrin alpha 2	AK132224|Spna2|20740|spectrin alpha 2	AK147317|Spna2|20740|spectrin alpha 2	AK085063|Spna2|20740|spectrin alpha 2	AK141149|Spna2|20740|spectrin alpha 2	BC049351|Spna2|20740|spectrin alpha 2	BC150941|Spna2|20740|spectrin alpha 2	BC158015|Spna2|20740|spectrin alpha 2	BC172095|Spna2|20740|spectrin alpha 2
mm9_v1_chr17_+_26813327_26813409	0.447393	PAX2.p2	AK017760|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	NM_025272|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK159669|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK134836|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK007610|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK008464|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK168015|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	BC024733|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK013229|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK030335|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E
mm9_v1_chr7_+_117161896_117161938	0.447238	PAX2.p2	AY316153|Ipo7|233726|importin 7	NM_181517|Ipo7|233726|importin 7
mm9_v1_chr6_-_30254273_30254567	0.446942	PAX2.p2	U19854|Ube2h|22214|ubiquitin-conjugating enzyme E2H	BC008517|Ube2h|22214|ubiquitin-conjugating enzyme E2H	AK131688|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001170345|Gm2058|100039133|predicted gene 2058	AK161414|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001169576|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_009459|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr5_+_9266117_9266130	0.446144	PAX2.p2	AK036245|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK082474|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK043026|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene
mm9_v1_chr10_+_90039435_90039495	0.440964	PAX2.p2	AK032211|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177396|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177398|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181398|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK163750|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK132228|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	AK019361|Ipw|16353|imprinted gene in the Prader-Willi syndrome region	AK049899|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr10_+_80847168_80847285	0.439641	PAX2.p2	AK154104|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase	NM_133964|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase	AK004052|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase	AK080664|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase	BC002295|Dohh|102115|deoxyhypusine hydroxylase/monooxygenase
mm9_v1_chr4_-_58924786_58924804	0.439265	PAX2.p2	AK038775|AI314180|230249|expressed sequence AI314180	AK043020|AI314180|230249|expressed sequence AI314180
mm9_v1_chr7_-_20214596_20214811	0.438456	PAX2.p2	DQ020178|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	DQ020179|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	DQ020180|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	DQ020181|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	BC034523|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	M83380|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	BC117793|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	AK156767|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	AK146932|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	BC019765|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B	NM_009046|Relb|19698|avian reticuloendotheliosis viral (v-rel) oncogene related B
mm9_v1_chr13_+_44826638_44826639	0.43816	PAX2.p2	AK147226|Jarid2|16468|jumonji, AT rich interactive domain 2
mm9_v1_chr4_+_155068450_155068511	0.437967	PAX2.p2	AK046537|B930041F14Rik|230991|RIKEN cDNA B930041F14 gene
mm9_v1_chr5_-_136646451_136646559	0.437288	PAX2.p2	BC115648|Orai2|269717|ORAI calcium release-activated calcium modulator 2	BC115649|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK195764|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK215306|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK079619|Orai2|269717|ORAI calcium release-activated calcium modulator 2	BC066070|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK087038|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK036013|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK042940|Orai2|269717|ORAI calcium release-activated calcium modulator 2	NM_178751|Orai2|269717|ORAI calcium release-activated calcium modulator 2
mm9_v1_chr7_-_107806887_107806989	0.435954	PAX2.p2	AK005102|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AK164683|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AK158172|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163183|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163184|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163185|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chr13_-_48720941_48721032	0.435766	PAX2.p2	BC066081|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1	NM_207232|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1	AK132781|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1	AK038922|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1	AK030415|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1
mm9_v1_chr18_+_37170365_37170627	0.434379	PAX2.p2	AK141960|Pcdha11|12942|protocadherin alpha 11	AK139436|Pcdha11|12942|protocadherin alpha 11	AK043705|Pcdha11|12942|protocadherin alpha 11	BC141349|Pcdha11|12942|protocadherin alpha 11	AY013758|Pcdha11|12942|protocadherin alpha 11	NM_009960|Pcdha11|12942|protocadherin alpha 11	AB008182|Pcdha11|12942|protocadherin alpha 11
mm9_v1_chr4_-_115747606_115747639	0.433625	PAX2.p2	AK003539|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	BC011388|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK019085|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK003266|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK088185|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK054005|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr18_+_67624517_67624527	0.433325	PAX2.p2	AK143220|Slmo1|225655|slowmo homolog 1 (Drosophila)
mm9_v1_chr3_-_89049088_89049120	0.432219	PAX2.p2	AK132368|Trim46|360213|tripartite motif-containing 46	AK170904|Trim46|360213|tripartite motif-containing 46	NM_001039466|Trim46|360213|tripartite motif-containing 46
mm9_v1_chr2_+_76244603_76244617	0.430705	PAX2.p2	AK037703|Osbpl6|99031|oxysterol binding protein-like 6	AK157944|Osbpl6|99031|oxysterol binding protein-like 6	AK220498|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr9_+_107904919_107905018	0.430639	PAX2.p2	AK172921|Ip6k1|27399|inositol hexaphosphate kinase 1	AK037925|Ip6k1|27399|inositol hexaphosphate kinase 1	AK088872|Ip6k1|27399|inositol hexaphosphate kinase 1	BC053030|Ip6k1|27399|inositol hexaphosphate kinase 1	AK171310|Ip6k1|27399|inositol hexaphosphate kinase 1	AK166143|Ip6k1|27399|inositol hexaphosphate kinase 1	BC059006|Ip6k1|27399|inositol hexaphosphate kinase 1	NM_013785|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr5_+_130620730_130620855	0.430594	PAX2.p2	AK162568|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK083583|Kctd7|212919|potassium channel tetramerisation domain containing 7	NM_172509|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK029942|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK034583|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK140606|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC139070|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC141201|Kctd7|212919|potassium channel tetramerisation domain containing 7
mm9_v1_chr17_-_33897262_33897301	0.429977	PAX2.p2	AK146452|Rab11b|19326|RAB11B, member RAS oncogene family	AK148022|Rab11b|19326|RAB11B, member RAS oncogene family
mm9_v1_chr13_-_24372584_24372663	0.428359	PAX2.p2	BC150819|Lrrc16a|68732|leucine rich repeat containing 16A	AK051570|Lrrc16a|68732|leucine rich repeat containing 16A	NM_026825|Lrrc16a|68732|leucine rich repeat containing 16A	AY437876|Lrrc16a|68732|leucine rich repeat containing 16A
mm9_v1_chr8_+_108160437_108160479	0.427682	PAX2.p2	NM_181322|Ctcf|13018|CCCTC-binding factor	U51037|Ctcf|13018|CCCTC-binding factor	BC037456|Ctcf|13018|CCCTC-binding factor	AK140164|Ctcf|13018|CCCTC-binding factor	BC009129|Ctcf|13018|CCCTC-binding factor	BC024382|Ctcf|13018|CCCTC-binding factor	BC049131|Ctcf|13018|CCCTC-binding factor	AK076192|Ctcf|13018|CCCTC-binding factor
mm9_v1_chr11_+_86940679_86940790	0.425877	PAX2.p2	AK012668|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr4_-_132833622_132833720	0.42485	PAX2.p2	BC037609|Tmem222|52174|transmembrane protein 222	AK079189|Tmem222|52174|transmembrane protein 222	AK017503|Tmem222|52174|transmembrane protein 222	AK160188|Tmem222|52174|transmembrane protein 222	NM_025667|Tmem222|52174|transmembrane protein 222
mm9_v1_chr4_+_116480325_116480357	0.424723	PAX2.p2	NM_001159581|Mutyh|70603|mutY homolog (E. coli)	NM_133250|Mutyh|70603|mutY homolog (E. coli)	AK077546|Mutyh|70603|mutY homolog (E. coli)	AK156790|Mutyh|70603|mutY homolog (E. coli)	AK017730|Mutyh|70603|mutY homolog (E. coli)	AB117939|Mutyh|70603|mutY homolog (E. coli)	BC057942|Mutyh|70603|mutY homolog (E. coli)
mm9_v1_chr1_-_65169708_65169766	0.424331	PAX2.p2	AK164708|D630023F18Rik|98303|RIKEN cDNA D630023F18 gene	BC137870|D630023F18Rik|98303|RIKEN cDNA D630023F18 gene	AK085417|D630023F18Rik|98303|RIKEN cDNA D630023F18 gene	NM_175293|D630023F18Rik|98303|RIKEN cDNA D630023F18 gene
mm9_v1_chr12_-_56922146_56922187	0.424321	PAX2.p2	AK046680|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	AY596972|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	AY596973|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	AY596974|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	NM_001003719|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	NM_001112714|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	NM_019994|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1
mm9_v1_chr11_-_6100014_6100127	0.42266	PAX2.p2	BC052089|Nudcd3|209586|NudC domain containing 3	AK215033|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr5_-_124875921_124875965	0.422309	PAX2.p2	NM_001081203|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK077133|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK165852|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)
mm9_v1_chr19_-_40588297_40588344	0.42186	PAX2.p2	NM_009166|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr4_-_108251718_108251734	0.421031	PAX2.p2	CT010186|Prpf38a|230596|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
mm9_v1_chr2_-_163470870_163470922	0.420738	PAX2.p2	NM_012032|Serinc3|26943|serine incorporator 3
mm9_v1_chr1_-_72920776_72921027	0.419905	PAX2.p2	X81583|Igfbp5|16011|insulin-like growth factor binding protein 5	BC054812|Igfbp5|16011|insulin-like growth factor binding protein 5	BC026805|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr2_-_130867149_130867194	0.417479	PAX2.p2	AK090192|Gfra4|14588|glial cell line derived neurotrophic factor family receptor alpha 4
mm9_v1_chr6_-_87995185_87995259	0.41738	PAX2.p2	AK057671|Rab7|19349|RAB7, member RAS oncogene family	AK159507|Rab7|19349|RAB7, member RAS oncogene family	X89650|Rab7|19349|RAB7, member RAS oncogene family	AK005004|Rab7|19349|RAB7, member RAS oncogene family	AK151078|Rab7|19349|RAB7, member RAS oncogene family	AK152666|Rab7|19349|RAB7, member RAS oncogene family	AK154234|Rab7|19349|RAB7, member RAS oncogene family	AK148117|Rab7|19349|RAB7, member RAS oncogene family
mm9_v1_chr18_-_34532974_34533089	0.416375	PAX2.p2	AY562233|Reep5|13476|receptor accessory protein 5	BC013052|Reep5|13476|receptor accessory protein 5	U28168|Reep5|13476|receptor accessory protein 5	AK152361|Reep5|13476|receptor accessory protein 5	AK167385|Reep5|13476|receptor accessory protein 5	AK013146|Reep5|13476|receptor accessory protein 5	AK010507|Reep5|13476|receptor accessory protein 5	AK151058|Reep5|13476|receptor accessory protein 5	AK151271|Reep5|13476|receptor accessory protein 5	AK152503|Reep5|13476|receptor accessory protein 5	NM_007874|Reep5|13476|receptor accessory protein 5
mm9_v1_chr9_+_122481617_122481627	0.414932	PAX2.p2	AK048438|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK049978|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK079255|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK084074|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK135014|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene
mm9_v1_chr16_+_17276384_17276419	0.41422	PAX2.p2	NM_177473|Tmem191c|224019|transmembrane protein 191C	AK016675|Tmem191c|224019|transmembrane protein 191C
mm9_v1_chr7_-_87468979_87469040	0.413151	PAX2.p2	AK088662|Rccd1|269955|RCC1 domain containing 1	AK084219|Rccd1|269955|RCC1 domain containing 1
mm9_v1_chr17_-_56214328_56214451	0.411958	PAX2.p2	BC016412|Ubxn6|66530|UBX domain protein 6	AK148170|Ubxn6|66530|UBX domain protein 6	BC049963|Ubxn6|66530|UBX domain protein 6	NM_024432|Ubxn6|66530|UBX domain protein 6	AK008942|Ubxn6|66530|UBX domain protein 6	AF272895|Ubxn6|66530|UBX domain protein 6	AK161273|Ubxn6|66530|UBX domain protein 6	AK075705|Ubxn6|66530|UBX domain protein 6	AK082510|Ubxn6|66530|UBX domain protein 6
mm9_v1_chr4_+_155221507_155221779	0.411646	PAX2.p2	NM_010091|Dvl1|13542|dishevelled, dsh homolog 1 (Drosophila)	AK155349|Dvl1|13542|dishevelled, dsh homolog 1 (Drosophila)	BC138848|Dvl1|13542|dishevelled, dsh homolog 1 (Drosophila)	BC138849|Dvl1|13542|dishevelled, dsh homolog 1 (Drosophila)	AK220168|Dvl1|13542|dishevelled, dsh homolog 1 (Drosophila)	U10115|Dvl1|13542|dishevelled, dsh homolog 1 (Drosophila)	BC088987|Dvl1|13542|dishevelled, dsh homolog 1 (Drosophila)	BC051991|Dvl1|13542|dishevelled, dsh homolog 1 (Drosophila)
mm9_v1_chr6_-_72849701_72849794	0.408895	PAX2.p2	AK142436|Kcmf1|74287|potassium channel modulatory factor 1	BC043330|Kcmf1|74287|potassium channel modulatory factor 1	BC029325|Kcmf1|74287|potassium channel modulatory factor 1
mm9_v1_chr5_+_109058788_109058836	0.408876	PAX2.p2	AK049952|Tmem175|72392|transmembrane protein 175	NM_001163531|Tmem175|72392|transmembrane protein 175	NM_001163532|Tmem175|72392|transmembrane protein 175	NM_028223|Tmem175|72392|transmembrane protein 175
mm9_v1_chr15_+_82105322_82105458	0.408628	PAX2.p2	AF104411|Sept3|24050|septin 3	NM_011889|Sept3|24050|septin 3	BC055738|Sept3|24050|septin 3
mm9_v1_chr7_-_87469309_87469339	0.408298	PAX2.p2	AK030872|Rccd1|269955|RCC1 domain containing 1	BC069844|Rccd1|269955|RCC1 domain containing 1	AK088482|Rccd1|269955|RCC1 domain containing 1	NM_173445|Rccd1|269955|RCC1 domain containing 1
mm9_v1_chr11_+_69652013_69652075	0.406656	PAX2.p2	BC048542|1810027O10Rik|69186|RIKEN cDNA 1810027O10 gene	BC117077|1810027O10Rik|69186|RIKEN cDNA 1810027O10 gene	BC117079|1810027O10Rik|69186|RIKEN cDNA 1810027O10 gene	NM_026982|1810027O10Rik|69186|RIKEN cDNA 1810027O10 gene	AK007623|1810027O10Rik|69186|RIKEN cDNA 1810027O10 gene	AK014035|1810027O10Rik|69186|RIKEN cDNA 1810027O10 gene
mm9_v1_chr9_-_96233411_96233654	0.406162	PAX2.p2	AK217555|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK213033|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK205378|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK217181|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK178890|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK181142|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK185963|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK212665|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK214140|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK216038|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK218295|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK218384|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chr9_-_76171352_76171416	0.405748	PAX2.p2	AY336084|Hcrtr2|387285|hypocretin (orexin) receptor 2	AY336085|Hcrtr2|387285|hypocretin (orexin) receptor 2	BC140957|Hcrtr2|387285|hypocretin (orexin) receptor 2	AK038551|Hcrtr2|387285|hypocretin (orexin) receptor 2	AK048781|Hcrtr2|387285|hypocretin (orexin) receptor 2	NM_198962|Hcrtr2|387285|hypocretin (orexin) receptor 2	AK079572|Hcrtr2|387285|hypocretin (orexin) receptor 2
mm9_v1_chr9_-_103382586_103382657	0.404573	PAX2.p2	AK134810|Bfsp2|107993|beaded filament structural protein 2, phakinin	BC068172|Bfsp2|107993|beaded filament structural protein 2, phakinin	NM_001002896|Bfsp2|107993|beaded filament structural protein 2, phakinin
mm9_v1_chr7_-_52379686_52379702	0.404246	PAX2.p2	U93864|Rps11|27207|ribosomal protein S11	AK005147|Rps11|27207|ribosomal protein S11
mm9_v1_chr17_+_88840048_88840164	0.402722	PAX2.p2	NM_180974|Foxn2|14236|forkhead box N2	AK154401|Foxn2|14236|forkhead box N2	AK030735|Foxn2|14236|forkhead box N2	AK031639|Foxn2|14236|forkhead box N2	BC138824|Foxn2|14236|forkhead box N2	BC138825|Foxn2|14236|forkhead box N2
mm9_v1_chr16_+_37868418_37868496	0.40179	PAX2.p2	AK090204|Lrrc58|320184|leucine rich repeat containing 58	AK049274|Lrrc58|320184|leucine rich repeat containing 58	NM_177093|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr7_+_52105323_52105411	0.401181	PAX2.p2	BC002180|Akt1s1|67605|AKT1 substrate 1 (proline-rich)
mm9_v1_chr15_-_93166789_93166977	0.400472	PAX2.p2	AK184096|Yaf2|67057|YY1 associated factor 2	AK012787|Yaf2|67057|YY1 associated factor 2
mm9_v1_chr11_-_120494842_120494902	0.400338	PAX2.p2	BC052633|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)	NM_010756|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm9_v1_chr2_-_130110142_130110202	0.397045	PAX2.p2	BC009022|Idh3b|170718|isocitrate dehydrogenase 3 (NAD+) beta	AY035212|Idh3b|170718|isocitrate dehydrogenase 3 (NAD+) beta	AK046059|Idh3b|170718|isocitrate dehydrogenase 3 (NAD+) beta	NM_130884|Idh3b|170718|isocitrate dehydrogenase 3 (NAD+) beta
mm9_v1_chr10_-_63552994_63553028	0.397019	PAX2.p2	AK036366|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK163753|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035773|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035858|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035882|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	NM_178678|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK032485|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK036180|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3
mm9_v1_chr6_-_87995010_87995181	0.396593	PAX2.p2	AK158971|Rab7|19349|RAB7, member RAS oncogene family	AK179526|Rab7|19349|RAB7, member RAS oncogene family	AK190348|Rab7|19349|RAB7, member RAS oncogene family	AK197221|Rab7|19349|RAB7, member RAS oncogene family	AK203105|Rab7|19349|RAB7, member RAS oncogene family	AK159928|Rab7|19349|RAB7, member RAS oncogene family	BC086793|Rab7|19349|RAB7, member RAS oncogene family	BC004597|Rab7|19349|RAB7, member RAS oncogene family
mm9_v1_chr8_-_107813357_107813427	0.395284	PAX2.p2	BC059045|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene	AK049007|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene	NM_001166394|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene	NM_028888|4931428F04Rik|74356|RIKEN cDNA 4931428F04 gene
mm9_v1_chr8_+_86496844_86496952	0.394754	PAX2.p2	NM_008854|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha	BC003238|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha	BC054834|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha	M12303|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha
mm9_v1_chr14_-_51550327_51550600	0.394708	PAX2.p2	BC049945|Tmem55b|219024|transmembrane protein 55b	BC039161|Tmem55b|219024|transmembrane protein 55b	BC058171|Tmem55b|219024|transmembrane protein 55b	BC106163|Tmem55b|219024|transmembrane protein 55b	AK152640|Tmem55b|219024|transmembrane protein 55b	AK152658|Tmem55b|219024|transmembrane protein 55b	AK144251|Tmem55b|219024|transmembrane protein 55b	NM_001033271|Tmem55b|219024|transmembrane protein 55b	AK159641|Tmem55b|219024|transmembrane protein 55b	AK169026|Tmem55b|219024|transmembrane protein 55b	BC027355|Tmem55b|219024|transmembrane protein 55b
mm9_v1_chr5_+_31117077_31117214	0.394556	PAX2.p2	BC048833|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AF468005|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	BC057918|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	NM_133350|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3	AK177097|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr7_-_29965655_29965691	0.394299	PAX2.p2	NM_026545|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr19_-_55177562_55177604	0.393183	PAX2.p2	AK047295|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial	AK173202|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial
mm9_v1_chr18_-_31769504_31769590	0.392521	PAX2.p2	BC020087|Slc25a46|67453|solute carrier family 25, member 46	AK030346|Slc25a46|67453|solute carrier family 25, member 46	AK031117|Slc25a46|67453|solute carrier family 25, member 46	AK160834|Slc25a46|67453|solute carrier family 25, member 46	NM_026165|Slc25a46|67453|solute carrier family 25, member 46	AK004625|Slc25a46|67453|solute carrier family 25, member 46	AK008131|Slc25a46|67453|solute carrier family 25, member 46	AK078383|Slc25a46|67453|solute carrier family 25, member 46	AK147936|Slc25a46|67453|solute carrier family 25, member 46
mm9_v1_chr14_+_55082960_55083081	0.392467	PAX2.p2	AK144035|Lrp10|65107|low-density lipoprotein receptor-related protein 10	NM_022993|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK132169|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK170325|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC052378|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC054447|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AB042200|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr17_+_3326513_3326683	0.391627	PAX2.p2	BC067048|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	NM_001122998|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	BC079600|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr16_-_18343944_18344024	0.390247	PAX2.p2	BC005445|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed	AK089239|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed	AK047383|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed	AK133588|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed	NM_138583|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed
mm9_v1_chr3_+_99966396_99966429	0.388121	PAX2.p2	AK146835|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2	AK082958|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2
mm9_v1_chr17_-_65962616_65962686	0.386943	PAX2.p2	AF115503|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK012357|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr16_-_85901362_85901374	0.386839	PAX2.p2	NM_011782|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr5_+_32761533_32761558	0.385321	PAX2.p2	AK147112|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK157914|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr5_+_73684069_73684071	0.384278	PAX2.p2	AK078909|Ociad1|68095|OCIA domain containing 1	AK167320|Ociad1|68095|OCIA domain containing 1
mm9_v1_chr9_+_111214242_111214242	0.383445	PAX2.p2	AK079552|Trank1|320429|tetratricopeptide repeat and ankyrin repeat containing 1	NM_001164659|Trank1|320429|tetratricopeptide repeat and ankyrin repeat containing 1
mm9_v1_chr3_+_89263114_89263157	0.381687	PAX2.p2	AK150483|Pmvk|68603|phosphomevalonate kinase	AK168358|Pmvk|68603|phosphomevalonate kinase
mm9_v1_chr7_-_112788821_112788929	0.380507	PAX2.p2	BC028310|Arfip2|76932|ADP-ribosylation factor interacting protein 2	BC013794|Arfip2|76932|ADP-ribosylation factor interacting protein 2	BC022942|Arfip2|76932|ADP-ribosylation factor interacting protein 2	AK009100|Arfip2|76932|ADP-ribosylation factor interacting protein 2	AK154772|Arfip2|76932|ADP-ribosylation factor interacting protein 2	NM_029802|Arfip2|76932|ADP-ribosylation factor interacting protein 2
mm9_v1_chr7_-_118923483_118923501	0.380332	PAX2.p2	BC024988|Galntl4|233733|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4	NM_173739|Galntl4|233733|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4	AK084671|Galntl4|233733|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4
mm9_v1_chr5_+_93696645_93696792	0.379773	PAX2.p2	BC060180|Ccng2|12452|cyclin G2	BC088980|Ccng2|12452|cyclin G2
mm9_v1_chr12_-_70260041_70260125	0.379067	PAX2.p2	BC051203|Rps29|20090|ribosomal protein S29	L31609|Rps29|20090|ribosomal protein S29	AK012285|Rps29|20090|ribosomal protein S29	AK002939|Rps29|20090|ribosomal protein S29	BC055750|Rps29|20090|ribosomal protein S29
mm9_v1_chr12_+_83717883_83718024	0.378679	PAX2.p2	AK139323|Rgs6|50779|regulator of G-protein signaling 6	AK052527|Rgs6|50779|regulator of G-protein signaling 6	NM_015812|Rgs6|50779|regulator of G-protein signaling 6
mm9_v1_chr12_+_45370113_45370142	0.378624	PAX2.p2	NM_026164|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr13_+_64533703_64533885	0.37698	PAX2.p2	AY005133|Cdk20|105278|cyclin-dependent kinase 20	BC031907|Cdk20|105278|cyclin-dependent kinase 20	NM_053180|Cdk20|105278|cyclin-dependent kinase 20	BC058353|Cdk20|105278|cyclin-dependent kinase 20
mm9_v1_chr14_+_30781514_30781692	0.376264	PAX2.p2	NM_019979|Selk|80795|selenoprotein K	AK008419|Selk|80795|selenoprotein K	BC038049|Selk|80795|selenoprotein K	AK003206|Selk|80795|selenoprotein K	BC096677|Selk|80795|selenoprotein K	AK007523|Selk|80795|selenoprotein K	AK006674|Selk|80795|selenoprotein K	BC096044|Selk|80795|selenoprotein K
mm9_v1_chr1_-_60099916_60100030	0.374774	PAX2.p2	BC079669|Ica1l|70375|islet cell autoantigen 1-like	NM_027407|Ica1l|70375|islet cell autoantigen 1-like	AK029991|Ica1l|70375|islet cell autoantigen 1-like	AK165131|Ica1l|70375|islet cell autoantigen 1-like
mm9_v1_chr10_-_62113965_62113997	0.372193	PAX2.p2	BC090996|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
mm9_v1_chr11_+_43287798_43287813	0.370964	PAX2.p2	AK007683|C1qtnf2|69183|C1q and tumor necrosis factor related protein 2
mm9_v1_chrM_+_409_428	0.370814	PAX2.p2	
mm9_v1_chr8_-_109620089_109620171	0.370386	PAX2.p2	AK160421|Terf2|21750|telomeric repeat binding factor 2
mm9_v1_chr5_-_144031617_144031663	0.370307	PAX2.p2	BC057078|Zfp316|54201|zinc finger protein 316
mm9_v1_chr11_+_97223739_97223783	0.369825	PAX2.p2	AK147580|Socs7|192157|suppressor of cytokine signaling 7	AK147650|Socs7|192157|suppressor of cytokine signaling 7
mm9_v1_chr15_-_38230397_38230491	0.369804	PAX2.p2	BC003316|Klf10|21847|Kruppel-like factor 10	Z36270|Klf10|21847|Kruppel-like factor 10	AK154719|Klf10|21847|Kruppel-like factor 10	AF064088|Klf10|21847|Kruppel-like factor 10	AK043433|Klf10|21847|Kruppel-like factor 10	AK079679|Klf10|21847|Kruppel-like factor 10	AF049879|Klf10|21847|Kruppel-like factor 10	NM_013692|Klf10|21847|Kruppel-like factor 10	AK004906|Klf10|21847|Kruppel-like factor 10
mm9_v1_chr18_+_23962468_23962588	0.369112	PAX2.p2	NM_153058|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK038562|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK140595|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK040767|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045904|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148954|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046221|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC027056|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC035254|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC025804|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK050527|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148480|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046095|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK088734|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC028987|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045493|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr7_-_31348148_31348229	0.368472	PAX2.p2	AK002440|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	AK007621|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	AK006284|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	BC024347|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	NM_025498|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	BC081443|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)
mm9_v1_chr3_+_89577436_89577810	0.367718	PAX2.p2	NM_027315|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1	AY112699|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1	AY945937|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1	AK146707|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chrX_+_136991190_136991343	0.367712	PAX2.p2	BC054772|Prps1|19139|phosphoribosyl pyrophosphate synthetase 1	AB025048|Prps1|19139|phosphoribosyl pyrophosphate synthetase 1	AK168036|Prps1|19139|phosphoribosyl pyrophosphate synthetase 1	AK185462|Prps1|19139|phosphoribosyl pyrophosphate synthetase 1
mm9_v1_chr8_-_73919683_73919738	0.367448	PAX2.p2	BC026453|Ushbp1|234395|Usher syndrome 1C binding protein 1	AK043798|Ushbp1|234395|Usher syndrome 1C binding protein 1	NM_181418|Ushbp1|234395|Usher syndrome 1C binding protein 1	AK034939|Ushbp1|234395|Usher syndrome 1C binding protein 1
mm9_v1_chr19_+_10763197_10763304	0.367113	PAX2.p2	AK158833|Vps37c|107305|vacuolar protein sorting 37C (yeast)	AK159309|Vps37c|107305|vacuolar protein sorting 37C (yeast)	AK165826|Vps37c|107305|vacuolar protein sorting 37C (yeast)	AK150606|Vps37c|107305|vacuolar protein sorting 37C (yeast)	BC025865|Vps37c|107305|vacuolar protein sorting 37C (yeast)	NM_181403|Vps37c|107305|vacuolar protein sorting 37C (yeast)
mm9_v1_chr16_+_81200909_81200967	0.367011	PAX2.p2	NM_001113208|Ncam2|17968|neural cell adhesion molecule 2	NM_010954|Ncam2|17968|neural cell adhesion molecule 2
mm9_v1_chr17_-_36408841_36408948	0.366795	PAX2.p2	AB046382|Trim39|79263|tripartite motif-containing 39	NM_024468|Trim39|79263|tripartite motif-containing 39
mm9_v1_chr2_-_168567422_168567434	0.366444	PAX2.p2	BC075718|Atp9a|11981|ATPase, class II, type 9A
mm9_v1_chr10_+_59569084_59569159	0.366436	PAX2.p2	AK140483|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	AK162941|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm9_v1_chr10_-_6979627_6979716	0.366336	PAX2.p2	AK082372|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr4_-_91038729_91038745	0.365779	PAX2.p2	U29088|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_010486|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_207686|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr16_+_8830175_8830249	0.365776	PAX2.p2	AK007485|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene	NM_001081400|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene	BC116778|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene	BC116780|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene
mm9_v1_chr17_+_24625530_24625580	0.364949	PAX2.p2	AK014376|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr13_-_55423246_55423342	0.36329	PAX2.p2	BC028872|Rab24|19336|RAB24, member RAS oncogene family	BC055894|Rab24|19336|RAB24, member RAS oncogene family	BC055914|Rab24|19336|RAB24, member RAS oncogene family	BC019950|Rab24|19336|RAB24, member RAS oncogene family	BC054466|Rab24|19336|RAB24, member RAS oncogene family	AK007602|Rab24|19336|RAB24, member RAS oncogene family	AK160309|Rab24|19336|RAB24, member RAS oncogene family	NM_009000|Rab24|19336|RAB24, member RAS oncogene family
mm9_v1_chr3_-_107888282_107888327	0.363146	PAX2.p2	AK034844|Ampd2|109674|adenosine monophosphate deaminase 2
mm9_v1_chr9_+_86465577_86465659	0.363129	PAX2.p2	NM_001145969|Rwdd2a|69519|RWD domain containing 2A	AK006533|Rwdd2a|69519|RWD domain containing 2A	BC115691|Rwdd2a|69519|RWD domain containing 2A	BC115692|Rwdd2a|69519|RWD domain containing 2A	NM_001145968|Rwdd2a|69519|RWD domain containing 2A	NM_027100|Rwdd2a|69519|RWD domain containing 2A
mm9_v1_chrX_-_159326220_159326424	0.362786	PAX2.p2	BC021373|Syap1|67043|synapse associated protein 1	AK147055|Syap1|67043|synapse associated protein 1	AK154843|Syap1|67043|synapse associated protein 1	AK051251|Syap1|67043|synapse associated protein 1	AK161413|Syap1|67043|synapse associated protein 1	AK008390|Syap1|67043|synapse associated protein 1	AK014893|Syap1|67043|synapse associated protein 1	AK011337|Syap1|67043|synapse associated protein 1	NM_025932|Syap1|67043|synapse associated protein 1
mm9_v1_chr12_+_110800212_110800261	0.362396	PAX2.p2	AK018142|Meg3|17263|maternally expressed 3
mm9_v1_chr11_+_79806552_79806633	0.362003	PAX2.p2	AK141264|Suz12|52615|suppressor of zeste 12 homolog (Drosophila)	BC064461|Suz12|52615|suppressor of zeste 12 homolog (Drosophila)	NM_001163018|Suz12|52615|suppressor of zeste 12 homolog (Drosophila)	NM_199196|Suz12|52615|suppressor of zeste 12 homolog (Drosophila)
mm9_v1_chr16_-_85901306_85901312	0.360236	PAX2.p2	AK020662|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr12_-_78063011_78063244	0.358898	PAX2.p2	S80521|Max|17187|Max protein	BC138671|Max|17187|Max protein	BC138672|Max|17187|Max protein	BC145369|Max|17187|Max protein	M63903|Max|17187|Max protein	AK080431|Max|17187|Max protein	NM_001146176|Max|17187|Max protein	NM_008558|Max|17187|Max protein
mm9_v1_chr12_+_4234026_4234103	0.358603	PAX2.p2	BC067010|2410017P09Rik|69709|RIKEN cDNA 2410017P09 gene	AK010531|2410017P09Rik|69709|RIKEN cDNA 2410017P09 gene
mm9_v1_chr11_+_72832523_72832554	0.358055	PAX2.p2	BC017529|Camkk1|55984|calcium/calmodulin-dependent protein kinase kinase 1, alpha	AF117384|Camkk1|55984|calcium/calmodulin-dependent protein kinase kinase 1, alpha
mm9_v1_chr13_+_64263131_64263227	0.357992	PAX2.p2	AK016800|Habp4|56541|hyaluronic acid binding protein 4	BC082806|Habp4|56541|hyaluronic acid binding protein 4	NM_019986|Habp4|56541|hyaluronic acid binding protein 4	AK144206|Habp4|56541|hyaluronic acid binding protein 4	AK146525|Habp4|56541|hyaluronic acid binding protein 4	AF227684|Habp4|56541|hyaluronic acid binding protein 4
mm9_v1_chrX_+_133242520_133242603	0.357873	PAX2.p2	BC083157|Tceal1|237052|transcription elongation factor A (SII)-like 1	BC011290|Tceal1|237052|transcription elongation factor A (SII)-like 1	NM_146236|Tceal1|237052|transcription elongation factor A (SII)-like 1
mm9_v1_chr11_+_69749297_69749476	0.357185	PAX2.p2	BC141112|Ybx2|53422|Y box protein 2	BC100454|Ybx2|53422|Y box protein 2	NM_016875|Ybx2|53422|Y box protein 2	AK131786|Ybx2|53422|Y box protein 2	AF073954|Ybx2|53422|Y box protein 2
mm9_v1_chr19_+_10278684_10278739	0.357129	PAX2.p2	NM_026919|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene	AK145833|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene	AK007351|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene	BC085316|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene
mm9_v1_chr4_+_129138915_129138922	0.356278	PAX2.p2	BC049111|Bsdc1|100383|BSD domain containing 1	NM_133889|Bsdc1|100383|BSD domain containing 1
mm9_v1_chr4_-_132833514_132833604	0.355585	PAX2.p2	
mm9_v1_chr3_+_13471643_13471656	0.35481	PAX2.p2	NM_001163328|Ralyl|76897|RALY RNA binding protein-like	NM_178631|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chrX_+_7299358_7299459	0.353732	PAX2.p2	BC011479|Wdr45|54636|WD repeat domain 45	NM_172372|Wdr45|54636|WD repeat domain 45	AF229635|Wdr45|54636|WD repeat domain 45
mm9_v1_chr9_+_58100961_58101075	0.353187	PAX2.p2	NM_026942|Stoml1|69106|stomatin-like 1	AK045820|Stoml1|69106|stomatin-like 1	BC017536|Stoml1|69106|stomatin-like 1	BC037074|Stoml1|69106|stomatin-like 1	AK148324|Stoml1|69106|stomatin-like 1
mm9_v1_chr10_-_17667872_17667872	0.353052	PAX2.p2	AK132340|Heca|380629|headcase homolog (Drosophila)	NM_001033432|Heca|380629|headcase homolog (Drosophila)
mm9_v1_chr7_-_106289635_106289638	0.352451	PAX2.p2	AK044129|Uvrag|78610|UV radiation resistance associated gene	AK089900|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr2_+_70312979_70313222	0.352404	PAX2.p2	AK036234|Sp5|64406|trans-acting transcription factor 5	NM_022435|Sp5|64406|trans-acting transcription factor 5	BC116691|Sp5|64406|trans-acting transcription factor 5	BC117505|Sp5|64406|trans-acting transcription factor 5	AF279479|Sp5|64406|trans-acting transcription factor 5
mm9_v1_chr11_+_54251680_54251744	0.351549	PAX2.p2	NM_173753|Fnip1|216742|folliculin interacting protein 1	BC079892|Fnip1|216742|folliculin interacting protein 1	AK122574|Fnip1|216742|folliculin interacting protein 1
mm9_v1_chr14_-_70553597_70553617	0.350905	PAX2.p2	AK050238|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene	NM_146055|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene	BC021475|2610301G19Rik|219158|RIKEN cDNA 2610301G19 gene
mm9_v1_chr1_-_95374913_95374964	0.350364	PAX2.p2	
mm9_v1_chr10_+_85484631_85484753	0.349974	PAX2.p2	AK165455|Fbxo7|69754|F-box protein 7	NM_153195|Fbxo7|69754|F-box protein 7	AK150626|Fbxo7|69754|F-box protein 7	AK151025|Fbxo7|69754|F-box protein 7	AK152513|Fbxo7|69754|F-box protein 7	AK147797|Fbxo7|69754|F-box protein 7	BC032153|Fbxo7|69754|F-box protein 7
mm9_v1_chr2_-_29979973_29980080	0.349343	PAX2.p2	BC048924|Zer1|227693|zer-1 homolog (C. elegans)	NM_178694|Zer1|227693|zer-1 homolog (C. elegans)	AK087046|Zer1|227693|zer-1 homolog (C. elegans)	AK081355|Zer1|227693|zer-1 homolog (C. elegans)	AK048853|Zer1|227693|zer-1 homolog (C. elegans)	BC057021|Zer1|227693|zer-1 homolog (C. elegans)	AK155401|Zer1|227693|zer-1 homolog (C. elegans)
mm9_v1_chr7_-_25772525_25772570	0.349095	PAX2.p2	BC040512|Atp1a3|232975|ATPase, Na+/K+ transporting, alpha 3 polypeptide
mm9_v1_chr4_+_119487105_119487332	0.3482	PAX2.p2	AY454348|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	BC058336|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	NM_010657|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	AY454345|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3
mm9_v1_chr3_+_89006938_89006939	0.34542	PAX2.p2	M24119|Gba|14466|glucosidase, beta, acid
mm9_v1_chr2_+_19579607_19579745	0.345147	PAX2.p2	NM_027715|Otud1|71198|OTU domain containing 1
mm9_v1_chr11_-_4749311_4749550	0.344479	PAX2.p2	L28176|Nf2|18016|neurofibromatosis 2	AK045998|Nf2|18016|neurofibromatosis 2	BC005442|Nf2|18016|neurofibromatosis 2	NM_010898|Nf2|18016|neurofibromatosis 2	X74671|Nf2|18016|neurofibromatosis 2
mm9_v1_chr19_-_7054901_7054955	0.343101	PAX2.p2	BC031824|Fkbp2|14227|FK506 binding protein 2	BC053692|Fkbp2|14227|FK506 binding protein 2	AK144284|Fkbp2|14227|FK506 binding protein 2	AK165394|Fkbp2|14227|FK506 binding protein 2	NM_008020|Fkbp2|14227|FK506 binding protein 2	NM_001166368|Fkbp2|14227|FK506 binding protein 2
mm9_v1_chr19_-_44629894_44629934	0.342972	PAX2.p2	AK010177|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	AK013516|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	BC043019|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	NM_026061|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	AK028070|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8
mm9_v1_chr15_+_100446018_100446129	0.341655	PAX2.p2	AK002595|Dazap2|23994|DAZ associated protein 2	AK145398|Dazap2|23994|DAZ associated protein 2	AK146970|Dazap2|23994|DAZ associated protein 2	L10906|Dazap2|23994|DAZ associated protein 2	AK088916|Dazap2|23994|DAZ associated protein 2	AK132139|Dazap2|23994|DAZ associated protein 2	AK137246|Dazap2|23994|DAZ associated protein 2	BC014808|Dazap2|23994|DAZ associated protein 2	NM_011873|Dazap2|23994|DAZ associated protein 2	BC083347|Dazap2|23994|DAZ associated protein 2	AF085348|Dazap2|23994|DAZ associated protein 2
mm9_v1_chr1_-_173080710_173080755	0.34106	PAX2.p2	BC083091|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	BC005779|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK002459|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK135503|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK012818|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK032458|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	NM_025321|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein
mm9_v1_chr6_+_124881376_124881406	0.340883	PAX2.p2	AK171220|Mlf2|30853|myeloid leukemia factor 2	NM_001170341|Mlf2|30853|myeloid leukemia factor 2	NM_145385|Mlf2|30853|myeloid leukemia factor 2
mm9_v1_chrX_-_20194385_20194425	0.340846	PAX2.p2	AK028121|Ndufb11|104130|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11
mm9_v1_chr10_-_75236102_75236123	0.33942	PAX2.p2	BC010753|Ddt|13202|D-dopachrome tautomerase	NM_010027|Ddt|13202|D-dopachrome tautomerase
mm9_v1_chr4_+_62021728_62021759	0.339188	PAX2.p2	NM_175090|Slc31a1|20529|solute carrier family 31, member 1	AK151337|Slc31a1|20529|solute carrier family 31, member 1
mm9_v1_chr1_+_75139738_75139836	0.338839	PAX2.p2	AK158940|Fam134a|227298|family with sequence similarity 134, member A	AK152268|Fam134a|227298|family with sequence similarity 134, member A
mm9_v1_chr3_+_65470149_65470220	0.337595	PAX2.p2	NM_001166659|Lekr1|624866|leucine, glutamate and lysine rich 1	NM_001037923|Lekr1|624866|leucine, glutamate and lysine rich 1	AK137452|Lekr1|624866|leucine, glutamate and lysine rich 1	BC147278|Lekr1|624866|leucine, glutamate and lysine rich 1	BC147279|Lekr1|624866|leucine, glutamate and lysine rich 1
mm9_v1_chr14_+_14117313_14117372	0.337133	PAX2.p2	BC026512|Synpr|72003|synaptoporin	AK005132|Synpr|72003|synaptoporin
mm9_v1_chr15_-_57723743_57723862	0.337017	PAX2.p2	AK203076|Derl1|67819|Der1-like domain family, member 1	AK207504|Derl1|67819|Der1-like domain family, member 1	AK218964|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr7_+_112788972_112789010	0.336672	PAX2.p2	AF150103|Fxc1|14356|fractured callus expressed transcript 1
mm9_v1_chr5_+_118695228_118695301	0.336277	PAX2.p2	NM_001081236|2410131K14Rik|76792|RIKEN cDNA 2410131K14 gene	AK090380|2410131K14Rik|76792|RIKEN cDNA 2410131K14 gene	BC104372|2410131K14Rik|76792|RIKEN cDNA 2410131K14 gene	BC104373|2410131K14Rik|76792|RIKEN cDNA 2410131K14 gene
mm9_v1_chr9_+_70526702_70526924	0.33486	PAX2.p2	BC066207|Adam10|11487|a disintegrin and metallopeptidase domain 10	NM_007399|Adam10|11487|a disintegrin and metallopeptidase domain 10	BC057346|Adam10|11487|a disintegrin and metallopeptidase domain 10
mm9_v1_chr2_-_64860728_64860875	0.333146	PAX2.p2	BC138581|Grb14|50915|growth factor receptor bound protein 14	BC145913|Grb14|50915|growth factor receptor bound protein 14	AF155647|Grb14|50915|growth factor receptor bound protein 14	NM_016719|Grb14|50915|growth factor receptor bound protein 14	AK147041|Grb14|50915|growth factor receptor bound protein 14	AK010849|Grb14|50915|growth factor receptor bound protein 14	AK010903|Grb14|50915|growth factor receptor bound protein 14
mm9_v1_chr11_-_116274264_116274379	0.33227	PAX2.p2	AK011693|Rnf157|217340|ring finger protein 157	NM_027258|Rnf157|217340|ring finger protein 157
mm9_v1_chr14_+_14286471_14286627	0.331564	PAX2.p2	NM_001163032|Synpr|72003|synaptoporin	AK033999|Synpr|72003|synaptoporin	AK032442|Synpr|72003|synaptoporin	AK045705|Synpr|72003|synaptoporin	AK049661|Synpr|72003|synaptoporin
mm9_v1_chr15_+_99223377_99223451	0.331293	PAX2.p2	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr11_+_84693721_84693889	0.329773	PAX2.p2	BC060115|Myo19|66196|myosin XIX	NM_025414|Myo19|66196|myosin XIX	AK080117|Myo19|66196|myosin XIX	AK053237|Myo19|66196|myosin XIX	AK053033|Myo19|66196|myosin XIX
mm9_v1_chr12_-_73509925_73510040	0.329226	PAX2.p2	NM_153457|Rtn1|104001|reticulon 1	AK132364|Rtn1|104001|reticulon 1
mm9_v1_chr10_-_127806232_127806252	0.329173	PAX2.p2	AK080862|Coq10a|210582|coenzyme Q10 homolog A (yeast)	BC147716|Coq10a|210582|coenzyme Q10 homolog A (yeast)	BC147722|Coq10a|210582|coenzyme Q10 homolog A (yeast)
mm9_v1_chr11_+_6191622_6191675	0.329173	PAX2.p2	AK150009|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK220536|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK008811|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	BC061232|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK201619|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK204071|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	BC057354|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK088582|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)
mm9_v1_chr2_-_164571430_164571435	0.32904	PAX2.p2	AK006001|Wfdc3|71856|WAP four-disulfide core domain 3	AK007299|Wfdc3|71856|WAP four-disulfide core domain 3
mm9_v1_chr18_+_38001276_38001417	0.328113	PAX2.p2	
mm9_v1_chr4_+_119095288_119095487	0.327854	PAX2.p2	BC147848|Zmynd12|332934|zinc finger, MYND domain containing 12	BC147851|Zmynd12|332934|zinc finger, MYND domain containing 12	NM_001014900|Zmynd12|332934|zinc finger, MYND domain containing 12	BC147552|Zmynd12|332934|zinc finger, MYND domain containing 12	BC147553|Zmynd12|332934|zinc finger, MYND domain containing 12	AY959941|Zmynd12|332934|zinc finger, MYND domain containing 12
mm9_v1_chr17_+_73186891_73186925	0.327472	PAX2.p2	AK154461|Ypel5|383295|yippee-like 5 (Drosophila)
mm9_v1_chr10_-_126558035_126558203	0.32651	PAX2.p2	BC006844|Os9|216440|amplified in osteosarcoma	BC031768|Os9|216440|amplified in osteosarcoma	AK028047|Os9|216440|amplified in osteosarcoma
mm9_v1_chr4_+_126754614_126754751	0.326195	PAX2.p2	AK035136|Zmym6|100177|zinc finger, MYM-type 6	NM_177462|Zmym6|100177|zinc finger, MYM-type 6	AK081836|Zmym6|100177|zinc finger, MYM-type 6	BC094598|Zmym6|100177|zinc finger, MYM-type 6	AK170695|Zmym6|100177|zinc finger, MYM-type 6	AK082594|Zmym6|100177|zinc finger, MYM-type 6	BC140958|Zmym6|100177|zinc finger, MYM-type 6	BC144807|Zmym6|100177|zinc finger, MYM-type 6
mm9_v1_chr7_+_28338239_28338353	0.325754	PAX2.p2	NM_175107|2310022A10Rik|66367|RIKEN cDNA 2310022A10 gene	BC023369|2310022A10Rik|66367|RIKEN cDNA 2310022A10 gene
mm9_v1_chr4_-_119212968_119213006	0.324832	PAX2.p2	AK086686|AA415398|433752|expressed sequence AA415398
mm9_v1_chr5_-_131783129_131783135	0.324079	PAX2.p2	AK048758|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)
mm9_v1_chr16_-_35769389_35769480	0.322965	PAX2.p2	BC037460|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK034214|Dirc2|224132|disrupted in renal carcinoma 2 (human)	NM_153550|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK172331|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr13_+_46597271_46597443	0.322913	PAX2.p2	AK035556|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	NM_026056|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr1_-_16509276_16509454	0.322624	PAX2.p2	AK031102|Stau2|29819|staufen (RNA binding protein) homolog 2 (Drosophila)	AF459099|Stau2|29819|staufen (RNA binding protein) homolog 2 (Drosophila)	AF459100|Stau2|29819|staufen (RNA binding protein) homolog 2 (Drosophila)	AK171076|Stau2|29819|staufen (RNA binding protein) homolog 2 (Drosophila)	NM_001111272|Stau2|29819|staufen (RNA binding protein) homolog 2 (Drosophila)	NM_025303|Stau2|29819|staufen (RNA binding protein) homolog 2 (Drosophila)
mm9_v1_chr16_-_4679664_4679776	0.321831	PAX2.p2	AK143624|Coro7|78885|coronin 7	AK018739|Coro7|78885|coronin 7	AK088155|Coro7|78885|coronin 7	AK041000|Coro7|78885|coronin 7	AK037894|Coro7|78885|coronin 7	BC061006|Coro7|78885|coronin 7	NM_030205|Coro7|78885|coronin 7	AK040408|Coro7|78885|coronin 7	AK150051|Coro7|78885|coronin 7	AK039585|Coro7|78885|coronin 7
mm9_v1_chr3_+_107989221_107989318	0.321219	PAX2.p2	AK173118|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_001004293|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_146137|Amigo1|229715|adhesion molecule with Ig like domain 1	BC022907|Amigo1|229715|adhesion molecule with Ig like domain 1	AK035960|Amigo1|229715|adhesion molecule with Ig like domain 1	BC010598|Amigo1|229715|adhesion molecule with Ig like domain 1
mm9_v1_chr5_+_138613248_138613363	0.320937	PAX2.p2	AK031638|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	NM_021392|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	AK165187|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	BC011174|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1
mm9_v1_chr16_+_13903253_13903280	0.320734	PAX2.p2	AK136449|Mpv17l|93734|Mpv17 transgene, kidney disease mutant-like
mm9_v1_chr6_+_115084919_115085009	0.320602	PAX2.p2	AF096867|Syn2|20965|synapsin II	NM_001111015|Syn2|20965|synapsin II	NM_013681|Syn2|20965|synapsin II	BC053427|Syn2|20965|synapsin II
mm9_v1_chr17_+_36974055_36974078	0.32038	PAX2.p2	AK142476|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr7_-_38554642_38554770	0.318152	PAX2.p2	AK122270|Zfp536|243937|zinc finger protein 536	AK030633|Zfp536|243937|zinc finger protein 536	NM_172385|Zfp536|243937|zinc finger protein 536
mm9_v1_chr15_+_30102710_30102805	0.317978	PAX2.p2	BC138260|Ctnnd2|18163|catenin (cadherin associated protein), delta 2	BC138261|Ctnnd2|18163|catenin (cadherin associated protein), delta 2	BC145217|Ctnnd2|18163|catenin (cadherin associated protein), delta 2
mm9_v1_chr7_-_117987922_117987942	0.317054	PAX2.p2	AK006791|Rnf141|67150|ring finger protein 141
mm9_v1_chr15_+_3224767_3224812	0.316333	PAX2.p2	AK190911|Sepp1|20363|selenoprotein P, plasma, 1	AK192055|Sepp1|20363|selenoprotein P, plasma, 1	AK192611|Sepp1|20363|selenoprotein P, plasma, 1	AK193239|Sepp1|20363|selenoprotein P, plasma, 1	AK193304|Sepp1|20363|selenoprotein P, plasma, 1	AK193589|Sepp1|20363|selenoprotein P, plasma, 1	AK196001|Sepp1|20363|selenoprotein P, plasma, 1	AK199796|Sepp1|20363|selenoprotein P, plasma, 1	AK200678|Sepp1|20363|selenoprotein P, plasma, 1	AK201439|Sepp1|20363|selenoprotein P, plasma, 1	AK201752|Sepp1|20363|selenoprotein P, plasma, 1	AK202422|Sepp1|20363|selenoprotein P, plasma, 1	AK203751|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr2_+_152857587_152857587	0.315693	PAX2.p2	AY534253|Xkr7|228787|X Kell blood group precursor related family member 7 homolog	NM_001011732|Xkr7|228787|X Kell blood group precursor related family member 7 homolog
mm9_v1_chrX_+_20374922_20374939	0.314416	PAX2.p2	AK034861|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr1_+_63492447_63492511	0.314071	PAX2.p2	AK046677|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_001177600|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_011780|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK034022|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK083458|Adam23|23792|a disintegrin and metallopeptidase domain 23
mm9_v1_chr2_-_25221101_25221190	0.313589	PAX2.p2	BC043307|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077912|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK151942|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	NM_001033293|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK149178|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK168977|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK159787|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077550|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	BC130030|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
mm9_v1_chr3_-_80606598_80606626	0.313417	PAX2.p2	AK045738|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chrX_-_147451785_147451868	0.313349	PAX2.p2	BC079653|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	BC057033|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	BC020354|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	NM_001168600|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	NM_198110|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like
mm9_v1_chr5_+_9266131_9266133	0.312475	PAX2.p2	AK134808|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene	AK161902|9330182L06Rik|231014|RIKEN cDNA 9330182L06 gene
mm9_v1_chr2_-_5816445_5816477	0.312362	PAX2.p2	AK161316|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr8_-_88364656_88364675	0.312059	PAX2.p2	AK009867|Itfg1|71927|integrin alpha FG-GAP repeat containing 1
mm9_v1_chr7_+_31076852_31076943	0.311122	PAX2.p2	BC138413|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr11_-_115948206_115948253	0.310594	PAX2.p2	BC031908|Wbp2|22378|WW domain binding protein 2	AK043037|Wbp2|22378|WW domain binding protein 2	AK150018|Wbp2|22378|WW domain binding protein 2	AK162810|Wbp2|22378|WW domain binding protein 2
mm9_v1_chrX_-_93152262_93152300	0.309416	PAX2.p2	AK089160|Las1l|76130|LAS1-like (S. cerevisiae)	NM_152822|Las1l|76130|LAS1-like (S. cerevisiae)	AK163919|Las1l|76130|LAS1-like (S. cerevisiae)
mm9_v1_chr1_+_108068405_108068445	0.309203	PAX2.p2	NM_133821|Phlpp1|98432|PH domain and leucine rich repeat protein phosphatase 1
mm9_v1_chr12_+_3426883_3427022	0.309145	PAX2.p2	AK080679|Asxl2|75302|additional sex combs like 2 (Drosophila)	NM_172421|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK036839|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK142135|Asxl2|75302|additional sex combs like 2 (Drosophila)	BC141140|Asxl2|75302|additional sex combs like 2 (Drosophila)
mm9_v1_chr3_+_52845429_52845504	0.308779	PAX2.p2	BC052079|Lhfp|108927|lipoma HMGIC fusion partner	NM_175386|Lhfp|108927|lipoma HMGIC fusion partner	AK159549|Lhfp|108927|lipoma HMGIC fusion partner	AK159126|Lhfp|108927|lipoma HMGIC fusion partner	AK171791|Lhfp|108927|lipoma HMGIC fusion partner	AK172390|Lhfp|108927|lipoma HMGIC fusion partner	AK172532|Lhfp|108927|lipoma HMGIC fusion partner	BC095934|Lhfp|108927|lipoma HMGIC fusion partner
mm9_v1_chr7_-_29965419_29965499	0.30858	PAX2.p2	BC005717|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK027973|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK150982|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK167948|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159216|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK168886|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr9_-_113935832_113935880	0.307967	PAX2.p2	AK013142|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK089994|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145665|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145998|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK045742|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC096582|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK141177|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK163472|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK044693|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK039010|Fbxl2|72179|F-box and leucine-rich repeat protein 2	NM_178624|Fbxl2|72179|F-box and leucine-rich repeat protein 2
mm9_v1_chr13_-_12432984_12433003	0.307898	PAX2.p2	AY036877|Actn2|11472|actinin alpha 2	AK047768|Actn2|11472|actinin alpha 2	BC089579|Actn2|11472|actinin alpha 2	NM_033268|Actn2|11472|actinin alpha 2
mm9_v1_chr11_+_82765567_82765652	0.307854	PAX2.p2	AK171886|Slfn5|327978|schlafen 5	AK036486|Slfn5|327978|schlafen 5	NM_183201|Slfn5|327978|schlafen 5	AK039815|Slfn5|327978|schlafen 5	AK040359|Slfn5|327978|schlafen 5
mm9_v1_chr2_+_153171730_153171874	0.307652	PAX2.p2	AK122413|Asxl1|228790|additional sex combs like 1 (Drosophila)	NM_001039939|Asxl1|228790|additional sex combs like 1 (Drosophila)
mm9_v1_chr11_+_103828184_103828347	0.307084	PAX2.p2	AK053123|Arf2|11841|ADP-ribosylation factor 2	NM_007477|Arf2|11841|ADP-ribosylation factor 2	BC010487|Arf2|11841|ADP-ribosylation factor 2
mm9_v1_chrX_-_20527674_20527737	0.3048	PAX2.p2	BC054474|Elk1|13712|ELK1, member of ETS oncogene family	AK132354|Elk1|13712|ELK1, member of ETS oncogene family	NM_007922|Elk1|13712|ELK1, member of ETS oncogene family	AK082260|Elk1|13712|ELK1, member of ETS oncogene family
mm9_v1_chr11_+_17059319_17059327	0.304503	PAX2.p2	AK145541|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)	AK163241|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm9_v1_chr8_+_56122680_56122847	0.303996	PAX2.p2	BC023461|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr11_-_53113682_53113812	0.302562	PAX2.p2	D85904|Hspa4|15525|heat shock protein 4
mm9_v1_chr4_-_155243505_155243560	0.302042	PAX2.p2	AK089229|Gltpd1|79554|glycolipid transfer protein domain containing 1	AK040664|Gltpd1|79554|glycolipid transfer protein domain containing 1	NM_024472|Gltpd1|79554|glycolipid transfer protein domain containing 1
mm9_v1_chr5_+_32761426_32761470	0.301995	PAX2.p2	AK166168|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166623|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168141|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr3_+_89518943_89518994	0.301939	PAX2.p2	NM_001038587|Adar|56417|adenosine deaminase, RNA-specific	AK147614|Adar|56417|adenosine deaminase, RNA-specific	AK076413|Adar|56417|adenosine deaminase, RNA-specific
mm9_v1_chr11_+_72832489_72832515	0.301015	PAX2.p2	AK144483|Camkk1|55984|calcium/calmodulin-dependent protein kinase kinase 1, alpha	NM_018883|Camkk1|55984|calcium/calmodulin-dependent protein kinase kinase 1, alpha
mm9_v1_chr19_+_4099973_4100180	0.300492	PAX2.p2	AK155377|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AF006467|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	NM_001136078|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK177924|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK179862|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK181080|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK188056|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK188611|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK208861|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK210105|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK210471|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK212060|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK187966|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1
mm9_v1_chr3_-_89716963_89717124	0.299954	PAX2.p2	X51976|Il6ra|16194|interleukin 6 receptor, alpha	X51975|Il6ra|16194|interleukin 6 receptor, alpha	BC019388|Il6ra|16194|interleukin 6 receptor, alpha	X53802|Il6ra|16194|interleukin 6 receptor, alpha	AK046337|Il6ra|16194|interleukin 6 receptor, alpha	AK082270|Il6ra|16194|interleukin 6 receptor, alpha	NM_010559|Il6ra|16194|interleukin 6 receptor, alpha	AK141197|Il6ra|16194|interleukin 6 receptor, alpha
mm9_v1_chr19_-_4012654_4012674	0.299799	PAX2.p2	BC041682|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK151455|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm9_v1_chr7_-_108011886_108011933	0.299035	PAX2.p2	AK088621|Relt|320100|RELT tumor necrosis factor receptor	BC100310|Relt|320100|RELT tumor necrosis factor receptor	AK042363|Relt|320100|RELT tumor necrosis factor receptor	AK049073|Relt|320100|RELT tumor necrosis factor receptor	NM_177073|Relt|320100|RELT tumor necrosis factor receptor
mm9_v1_chr2_+_164571458_164571553	0.29844	PAX2.p2	AK018299|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK145239|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168357|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168315|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	BC003486|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	NM_133763|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AB045974|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1
mm9_v1_chr10_+_39451923_39451975	0.298292	PAX2.p2	AK032532|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	BC048946|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	AB031049|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	NM_011264|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm9_v1_chr12_-_56921919_56921956	0.297711	PAX2.p2	AK129236|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1
mm9_v1_chr12_-_92828896_92828926	0.297644	PAX2.p2	BC117829|Gtf2a1|83602|general transcription factor II A, 1	BC117830|Gtf2a1|83602|general transcription factor II A, 1	AK048711|Gtf2a1|83602|general transcription factor II A, 1	NM_175335|Gtf2a1|83602|general transcription factor II A, 1
mm9_v1_chr10_-_88067758_88067896	0.297589	PAX2.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr2_+_169459145_169459258	0.29652	PAX2.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr13_+_13682675_13682689	0.29615	PAX2.p2	L77884|Lyst|17101|lysosomal trafficking regulator	NM_010748|Lyst|17101|lysosomal trafficking regulator	U70015|Lyst|17101|lysosomal trafficking regulator
mm9_v1_chr6_+_143115732_143115821	0.296016	PAX2.p2	AK051039|Etnk1|75320|ethanolamine kinase 1	AK044502|Etnk1|75320|ethanolamine kinase 1	NM_029250|Etnk1|75320|ethanolamine kinase 1	AK016135|Etnk1|75320|ethanolamine kinase 1	AK031560|Etnk1|75320|ethanolamine kinase 1	AK033268|Etnk1|75320|ethanolamine kinase 1	AK164928|Etnk1|75320|ethanolamine kinase 1
mm9_v1_chr5_-_149364353_149364422	0.293656	PAX2.p2	NM_011908|Ubl3|24109|ubiquitin-like 3	BC024507|Ubl3|24109|ubiquitin-like 3	BC043729|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr8_+_85689250_85689250	0.293183	PAX2.p2	AK049049|Tbc1d9|71310|TBC1 domain family, member 9	NM_001111304|Tbc1d9|71310|TBC1 domain family, member 9	NM_027758|Tbc1d9|71310|TBC1 domain family, member 9
mm9_v1_chr5_-_151992724_151992782	0.291864	PAX2.p2	AK148227|Stard13|243362|StAR-related lipid transfer (START) domain containing 13	AK050259|Stard13|243362|StAR-related lipid transfer (START) domain containing 13	NM_001163493|Stard13|243362|StAR-related lipid transfer (START) domain containing 13	NM_146258|Stard13|243362|StAR-related lipid transfer (START) domain containing 13	BC027830|Stard13|243362|StAR-related lipid transfer (START) domain containing 13
mm9_v1_chr4_-_43013064_43013178	0.291272	PAX2.p2	
mm9_v1_chr7_-_133942605_133942705	0.290995	PAX2.p2	Y00516|Aldoa|11674|aldolase A, fructose-bisphosphate	BC043026|Aldoa|11674|aldolase A, fructose-bisphosphate	EF662060|Aldoa|11674|aldolase A, fructose-bisphosphate	AK145639|Aldoa|11674|aldolase A, fructose-bisphosphate	AK002561|Aldoa|11674|aldolase A, fructose-bisphosphate	AK162290|Aldoa|11674|aldolase A, fructose-bisphosphate	BC066218|Aldoa|11674|aldolase A, fructose-bisphosphate	BC066801|Aldoa|11674|aldolase A, fructose-bisphosphate	BC050896|Aldoa|11674|aldolase A, fructose-bisphosphate	NM_001177307|Aldoa|11674|aldolase A, fructose-bisphosphate	BC089495|Aldoa|11674|aldolase A, fructose-bisphosphate
mm9_v1_chr3_+_8509479_8509599	0.289835	PAX2.p2	AK149212|Stmn2|20257|stathmin-like 2	AK043202|Stmn2|20257|stathmin-like 2	AK003659|Stmn2|20257|stathmin-like 2	AK013020|Stmn2|20257|stathmin-like 2	NM_025285|Stmn2|20257|stathmin-like 2	BC026538|Stmn2|20257|stathmin-like 2
mm9_v1_chrX_-_132602648_132602774	0.289071	PAX2.p2	AF097439|Bex2|12069|brain expressed X-linked 2	BC027529|Bex2|12069|brain expressed X-linked 2	AK132005|Bex2|12069|brain expressed X-linked 2	NM_009749|Bex2|12069|brain expressed X-linked 2
mm9_v1_chr17_-_34161584_34161626	0.288895	PAX2.p2	AK154962|Ring1|19763|ring finger protein 1	BC009070|Ring1|19763|ring finger protein 1	AK155509|Ring1|19763|ring finger protein 1	NM_009066|Ring1|19763|ring finger protein 1
mm9_v1_chr10_+_114822056_114822157	0.288356	PAX2.p2	BC139124|Zfc3h1|216345|zinc finger, C3H1-type containing
mm9_v1_chr11_+_17059297_17059300	0.288036	PAX2.p2	NM_024459|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm9_v1_chr2_+_163428073_163428114	0.287686	PAX2.p2	AK043791|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK052794|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK018052|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK156641|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK081680|Ttpal|76080|tocopherol (alpha) transfer protein-like	BC052389|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK033600|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr6_+_38383834_38383834	0.287372	PAX2.p2	AK031359|Ubn2|320538|ubinuclein 2
mm9_v1_chr8_+_123192124_123192244	0.286481	PAX2.p2	AK141048|Cox4nb|18117|COX4 neighbor	AK012583|Cox4i1|12857|cytochrome c oxidase subunit IV isoform 1	NM_009941|Cox4i1|12857|cytochrome c oxidase subunit IV isoform 1	AK150447|Cox4i1|12857|cytochrome c oxidase subunit IV isoform 1	M37829|Cox4i1|12857|cytochrome c oxidase subunit IV isoform 1	BC132269|Cox4i1|12857|cytochrome c oxidase subunit IV isoform 1	BC132275|Cox4i1|12857|cytochrome c oxidase subunit IV isoform 1	X54691|Cox4i1|12857|cytochrome c oxidase subunit IV isoform 1	AK019276|Cox4i1|12857|cytochrome c oxidase subunit IV isoform 1
mm9_v1_chr12_+_110783593_110783620	0.286033	PAX2.p2	AK018105|Meg3|17263|maternally expressed 3	AK140201|Meg3|17263|maternally expressed 3
mm9_v1_chr13_-_47110187_47110218	0.285652	PAX2.p2	BC062644|Nhlrc1|105193|NHL repeat containing 1	BC118952|Nhlrc1|105193|NHL repeat containing 1	AK045746|Nhlrc1|105193|NHL repeat containing 1	BC118951|Nhlrc1|105193|NHL repeat containing 1	NM_175340|Nhlrc1|105193|NHL repeat containing 1
mm9_v1_chr15_+_65618633_65618779	0.285294	PAX2.p2	
mm9_v1_chr12_+_82046447_82046492	0.284032	PAX2.p2	NM_001079694|Srsf5|20384|serine/arginine-rich splicing factor 5	NM_001079695|Srsf5|20384|serine/arginine-rich splicing factor 5	NM_009159|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr9_+_14305055_14305063	0.283524	PAX2.p2	NM_023153|Cwc15|66070|CWC15 homolog (S. cerevisiae)
mm9_v1_chr6_-_122692407_122692520	0.28035	PAX2.p2	CT010354|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	M75135|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	X61093|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC050095|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK155997|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC034122|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC058811|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr7_+_16894925_16895103	0.279456	PAX2.p2	NM_133234|Bbc3|170770|BCL2 binding component 3	BC044782|Bbc3|170770|BCL2 binding component 3	AF332560|Bbc3|170770|BCL2 binding component 3	BC060370|Bbc3|170770|BCL2 binding component 3	BC147261|Bbc3|170770|BCL2 binding component 3	BC147262|Bbc3|170770|BCL2 binding component 3
mm9_v1_chr9_-_66682454_66682525	0.279007	PAX2.p2	AB197123|Aph1c|68318|anterior pharynx defective 1c homolog (C. elegans)	AK002310|Aph1c|68318|anterior pharynx defective 1c homolog (C. elegans)	BC050923|Aph1c|68318|anterior pharynx defective 1c homolog (C. elegans)	BC063254|Aph1c|68318|anterior pharynx defective 1c homolog (C. elegans)	NM_026674|Aph1c|68318|anterior pharynx defective 1c homolog (C. elegans)	AK155147|Aph1c|68318|anterior pharynx defective 1c homolog (C. elegans)
mm9_v1_chr15_+_80085923_80086003	0.278398	PAX2.p2	AK146193|Atf4|11911|activating transcription factor 4	AK144777|Atf4|11911|activating transcription factor 4	AK155254|Atf4|11911|activating transcription factor 4	AK138657|Atf4|11911|activating transcription factor 4	AK150231|Atf4|11911|activating transcription factor 4	X61507|Atf4|11911|activating transcription factor 4	AK156298|Atf4|11911|activating transcription factor 4	M94087|Atf4|11911|activating transcription factor 4	BC031542|Atf4|11911|activating transcription factor 4	AK157839|Atf4|11911|activating transcription factor 4	AK195416|Atf4|11911|activating transcription factor 4
mm9_v1_chr1_-_37597847_37597897	0.277868	PAX2.p2	AK155724|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm9_v1_chr18_-_60908267_60908331	0.27676	PAX2.p2	AK147282|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AK035642|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr1_-_182413489_182413558	0.276642	PAX2.p2	BC120654|6330403A02Rik|381310|RIKEN cDNA 6330403A02 gene	BC120656|6330403A02Rik|381310|RIKEN cDNA 6330403A02 gene
mm9_v1_chr9_+_59387443_59387536	0.276234	PAX2.p2	AK075911|Hexa|15211|hexosaminidase A	NM_010421|Hexa|15211|hexosaminidase A	AK168186|Hexa|15211|hexosaminidase A	AK159091|Hexa|15211|hexosaminidase A	U07631|Hexa|15211|hexosaminidase A	AK159814|Hexa|15211|hexosaminidase A	AK167013|Hexa|15211|hexosaminidase A	AK170903|Hexa|15211|hexosaminidase A	AK075895|Hexa|15211|hexosaminidase A	AK151960|Hexa|15211|hexosaminidase A	AK080777|Hexa|15211|hexosaminidase A	AK159890|Hexa|15211|hexosaminidase A	AK150444|Hexa|15211|hexosaminidase A	BC010755|Hexa|15211|hexosaminidase A	AK160112|Hexa|15211|hexosaminidase A	X64331|Hexa|15211|hexosaminidase A
mm9_v1_chr2_+_84574217_84574360	0.274999	PAX2.p2	AB098743|Ypel4|241525|yippee-like 4 (Drosophila)	NM_001005342|Ypel4|241525|yippee-like 4 (Drosophila)
mm9_v1_chr11_-_70034477_70034547	0.274314	PAX2.p2	AK028143|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13	AK028759|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13	NM_172371|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm9_v1_chr11_-_93816916_93817051	0.274162	PAX2.p2	EF437324|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	AK151262|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	BC086892|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	NM_001077529|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in
mm9_v1_chr11_-_75992950_75993004	0.273345	PAX2.p2	AK049259|Vps53|68299|vacuolar protein sorting 53 (yeast)
mm9_v1_chr9_-_29219382_29219527	0.272942	PAX2.p2	AK158752|Ntm|235106|neurotrimin
mm9_v1_chr9_+_21229348_21229458	0.272787	PAX2.p2	AK172231|Dnm2|13430|dynamin 2	AK170574|Dnm2|13430|dynamin 2	AK005012|Dnm2|13430|dynamin 2	AK157844|Dnm2|13430|dynamin 2	AK150046|Dnm2|13430|dynamin 2	AK171566|Dnm2|13430|dynamin 2	NM_001039520|Dnm2|13430|dynamin 2	AK171049|Dnm2|13430|dynamin 2	L31398|Dnm2|13430|dynamin 2
mm9_v1_chr19_-_54018660_54018717	0.272539	PAX2.p2	AK011697|Bbip1|66360|BBSome interacting protein 1	AK011849|Bbip1|66360|BBSome interacting protein 1	BC054437|Bbip1|66360|BBSome interacting protein 1	AK009096|Bbip1|66360|BBSome interacting protein 1	BC062276|Bbip1|66360|BBSome interacting protein 1
mm9_v1_chr9_-_14304843_14304925	0.271926	PAX2.p2	AK155227|Kdm4d|244694|lysine (K)-specific demethylase 4D	AK030020|Kdm4d|244694|lysine (K)-specific demethylase 4D	NM_173433|Kdm4d|244694|lysine (K)-specific demethylase 4D
mm9_v1_chrX_+_162878676_162878756	0.271885	PAX2.p2	AK002658|Trappc2|66226|trafficking protein particle complex 2	BC061087|Trappc2|66226|trafficking protein particle complex 2	AY318751|Trappc2|66226|trafficking protein particle complex 2	AK007951|Trappc2|66226|trafficking protein particle complex 2	AK008564|Trappc2|66226|trafficking protein particle complex 2	AK034967|Trappc2|66226|trafficking protein particle complex 2	BC099551|Trappc2|66226|trafficking protein particle complex 2	BC034845|Trappc2|66226|trafficking protein particle complex 2	AK004389|Trappc2|66226|trafficking protein particle complex 2	AK077643|Trappc2|66226|trafficking protein particle complex 2	AK007889|Trappc2|66226|trafficking protein particle complex 2	NM_025432|Trappc2|66226|trafficking protein particle complex 2
mm9_v1_chr2_+_31951149_31951239	0.2714	PAX2.p2	AK052883|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3	NM_145521|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3	BC016136|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3
mm9_v1_chr14_-_47809063_47809127	0.271263	PAX2.p2	L09737|Gch1|14528|GTP cyclohydrolase 1	BC005643|Gch1|14528|GTP cyclohydrolase 1	NM_008102|Gch1|14528|GTP cyclohydrolase 1	BC069921|Gch1|14528|GTP cyclohydrolase 1	AK150657|Gch1|14528|GTP cyclohydrolase 1	AK152571|Gch1|14528|GTP cyclohydrolase 1
mm9_v1_chr11_-_20641493_20641604	0.271101	PAX2.p2	AK042681|Aftph|216549|aftiphilin	AK030572|Aftph|216549|aftiphilin
mm9_v1_chr16_-_91011339_91011552	0.270957	PAX2.p2	NM_001045515|Synj1|104015|synaptojanin 1	NM_001164483|Synj1|104015|synaptojanin 1
mm9_v1_chr11_+_6191599_6191621	0.270779	PAX2.p2	AK147289|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	NM_010956|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK169286|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)
mm9_v1_chr15_+_81494399_81494424	0.269533	PAX2.p2	BC023933|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	BC030864|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK141810|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr16_-_23988680_23988725	0.269143	PAX2.p2	D38377|Bcl6|12053|B-cell leukemia/lymphoma 6	BC052315|Bcl6|12053|B-cell leukemia/lymphoma 6	NM_009744|Bcl6|12053|B-cell leukemia/lymphoma 6	AK039228|Bcl6|12053|B-cell leukemia/lymphoma 6	AK036975|Bcl6|12053|B-cell leukemia/lymphoma 6	AK151229|Bcl6|12053|B-cell leukemia/lymphoma 6
mm9_v1_chr4_-_9570815_9570863	0.268275	PAX2.p2	AF302654|Asph|65973|aspartate-beta-hydroxylase	AF289490|Asph|65973|aspartate-beta-hydroxylase	AF289491|Asph|65973|aspartate-beta-hydroxylase	AF289492|Asph|65973|aspartate-beta-hydroxylase	AF221854|Asph|65973|aspartate-beta-hydroxylase	AF223413|Asph|65973|aspartate-beta-hydroxylase	NM_001177852|Asph|65973|aspartate-beta-hydroxylase	NM_001177853|Asph|65973|aspartate-beta-hydroxylase	NM_001177854|Asph|65973|aspartate-beta-hydroxylase	NM_133723|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chr19_+_10651924_10651980	0.268047	PAX2.p2	AK169729|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK172638|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK040692|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK160179|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK168841|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK170911|Cybasc3|225912|cytochrome b, ascorbate dependent 3
mm9_v1_chr7_+_151361424_151361430	0.268002	PAX2.p2	AK139360|Shank2|210274|SH3/ankyrin domain gene 2	NM_001113373|Shank2|210274|SH3/ankyrin domain gene 2
mm9_v1_chr13_+_13682653_13682668	0.267807	PAX2.p2	AK165585|Lyst|17101|lysosomal trafficking regulator
mm9_v1_chr11_-_106077568_106077625	0.26751	PAX2.p2	BC120502|Ccdc47|67163|coiled-coil domain containing 47	BC137681|Ccdc47|67163|coiled-coil domain containing 47	AK011882|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr2_+_127095942_127096024	0.267426	PAX2.p2	AK143699|Stard7|99138|START domain containing 7	NM_139308|Stard7|99138|START domain containing 7	BC017524|Stard7|99138|START domain containing 7	BC080747|Stard7|99138|START domain containing 7
mm9_v1_chr4_+_40917975_40918059	0.265168	PAX2.p2	NM_023739|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK144647|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK005038|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK050749|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK160013|Nfx1|74164|nuclear transcription factor, X-box binding 1	AF223576|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK146108|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK155387|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK033850|Nfx1|74164|nuclear transcription factor, X-box binding 1	X80436|Nfx1|74164|nuclear transcription factor, X-box binding 1	BC053709|Nfx1|74164|nuclear transcription factor, X-box binding 1
mm9_v1_chrX_+_98835386_98835624	0.264682	PAX2.p2	AK076418|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_139144|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AK163296|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC025097|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC057319|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC037194|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC055851|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AF363030|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm9_v1_chr4_-_120689415_120689638	0.264493	PAX2.p2	AK200754|Smap2|69780|stromal membrane-associated GTPase-activating protein 2
mm9_v1_chrX_+_65931956_65932015	0.263358	PAX2.p2	AF461114|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK205186|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK208300|Fmr1|14265|fragile X mental retardation syndrome 1 homolog
mm9_v1_chr19_-_4012698_4012725	0.262891	PAX2.p2	AK075692|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	AK005021|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	BC014818|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1	NM_133666|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm9_v1_chr15_-_97597988_97598129	0.262599	PAX2.p2	AK142594|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	AK044566|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	AK169430|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	AK162003|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	BC020532|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	NM_001177810|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	NM_001177811|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	NM_144850|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3
mm9_v1_chrX_-_13423666_13423727	0.262593	PAX2.p2	NM_009806|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17137|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17138|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm9_v1_chr2_-_101489613_101489698	0.262185	PAX2.p2	BC138342|Rag1|19373|recombination activating gene 1	M29475|Rag1|19373|recombination activating gene 1	AK088725|Rag1|19373|recombination activating gene 1	AK162974|Rag1|19373|recombination activating gene 1	DQ112091|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	DQ112092|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	NM_009019|Rag1|19373|recombination activating gene 1
mm9_v1_chr2_-_130250376_130250436	0.26217	PAX2.p2	NM_001114541|Fam113a|319513|family with sequence similarity 113, member A	BC064802|Fam113a|319513|family with sequence similarity 113, member A	AK031469|Fam113a|319513|family with sequence similarity 113, member A
mm9_v1_chr4_-_43591258_43591425	0.261733	PAX2.p2	BC056935|Gba2|230101|glucosidase beta 2	BC031397|Gba2|230101|glucosidase beta 2	AK089192|Gba2|230101|glucosidase beta 2
mm9_v1_chr17_+_28046196_28046431	0.261446	PAX2.p2	BC050847|Anks1|224650|ankyrin repeat and SAM domain containing 1	NM_181413|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK129094|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK147273|Anks1|224650|ankyrin repeat and SAM domain containing 1
mm9_v1_chr7_-_16531098_16531150	0.261212	PAX2.p2	AK079167|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK158665|Gltscr2|68077|glioma tumor suppressor candidate region gene 2
mm9_v1_chr10_-_90586663_90586709	0.259671	PAX2.p2	BC004030|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK077274|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK152341|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK168580|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	NM_133668|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm9_v1_chr13_+_49516666_49516679	0.259165	PAX2.p2	BC065157|Ippk|75678|inositol 1,3,4,5,6-pentakisphosphate 2-kinase	BC062167|Ippk|75678|inositol 1,3,4,5,6-pentakisphosphate 2-kinase	NM_199056|Ippk|75678|inositol 1,3,4,5,6-pentakisphosphate 2-kinase
mm9_v1_chr5_-_124777828_124777881	0.25904	PAX2.p2	AK081178|Mphosph9|269702|M-phase phosphoprotein 9	AK132598|Mphosph9|269702|M-phase phosphoprotein 9	AK084586|Mphosph9|269702|M-phase phosphoprotein 9
mm9_v1_chr2_+_109731003_109731053	0.258529	PAX2.p2	AK135810|Lin7c|22343|lin-7 homolog C (C. elegans)	AK083299|Lin7c|22343|lin-7 homolog C (C. elegans)	AK015399|Lin7c|22343|lin-7 homolog C (C. elegans)	AK078923|Lin7c|22343|lin-7 homolog C (C. elegans)	AK128989|Lin7c|22343|lin-7 homolog C (C. elegans)	BC052471|Lin7c|22343|lin-7 homolog C (C. elegans)	AK133531|Lin7c|22343|lin-7 homolog C (C. elegans)	AF173083|Lin7c|22343|lin-7 homolog C (C. elegans)	AF087695|Lin7c|22343|lin-7 homolog C (C. elegans)	BC046966|Lin7c|22343|lin-7 homolog C (C. elegans)	NM_011699|Lin7c|22343|lin-7 homolog C (C. elegans)	AK161076|Lin7c|22343|lin-7 homolog C (C. elegans)
mm9_v1_chr3_-_152331083_152331103	0.25815	PAX2.p2	AK053807|Ak5|229949|adenylate kinase 5	NM_001081277|Ak5|229949|adenylate kinase 5
mm9_v1_chr3_+_75878452_75878519	0.257815	PAX2.p2	AK140611|Fstl5|213262|follistatin-like 5	AK033652|Fstl5|213262|follistatin-like 5	AK081152|Fstl5|213262|follistatin-like 5	AF374460|Fstl5|213262|follistatin-like 5	BC075640|Fstl5|213262|follistatin-like 5	NM_178673|Fstl5|213262|follistatin-like 5
mm9_v1_chr15_-_84387921_84388066	0.257125	PAX2.p2	BC058638|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like
mm9_v1_chr14_+_21167383_21167391	0.256556	PAX2.p2	AK031973|Fam149b|105428|family with sequence similarity 149, member B	NM_001177633|Fam149b|105428|family with sequence similarity 149, member B	NM_172379|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chr9_+_54547344_54547366	0.255965	PAX2.p2	AK046476|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4	AK076175|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4	AK141909|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4	NM_021422|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4
mm9_v1_chr4_+_124707238_124707259	0.255544	PAX2.p2	NM_145552|Gnl2|230737|guanine nucleotide binding protein-like 2 (nucleolar)
mm9_v1_chr17_-_33961403_33961506	0.255249	PAX2.p2	U11248|Rps28|54127|ribosomal protein S28	BC010987|Rps28|54127|ribosomal protein S28	AK002919|Rps28|54127|ribosomal protein S28	BC090982|Rps28|54127|ribosomal protein S28	NM_016844|Rps28|54127|ribosomal protein S28	BC125644|Rps28|54127|ribosomal protein S28	BC125646|Rps28|54127|ribosomal protein S28
mm9_v1_chr11_-_61743706_61743758	0.254891	PAX2.p2	AK049399|Akap10|56697|A kinase (PRKA) anchor protein 10	AK083255|Akap10|56697|A kinase (PRKA) anchor protein 10	NM_019921|Akap10|56697|A kinase (PRKA) anchor protein 10	AK162966|Akap10|56697|A kinase (PRKA) anchor protein 10
mm9_v1_chr5_+_121902672_121902717	0.254284	PAX2.p2	AK015103|Tmem116|77462|transmembrane protein 116	AK021099|Tmem116|77462|transmembrane protein 116	NM_029912|Tmem116|77462|transmembrane protein 116
mm9_v1_chr15_-_42508294_42508522	0.25424	PAX2.p2	U83509|Angpt1|11600|angiopoietin 1	BC067410|Angpt1|11600|angiopoietin 1	NM_009640|Angpt1|11600|angiopoietin 1	AK172868|Angpt1|11600|angiopoietin 1	AK012027|Angpt1|11600|angiopoietin 1	AK088439|Angpt1|11600|angiopoietin 1
mm9_v1_chr8_+_23587151_23587348	0.254008	PAX2.p2	NM_011394|Slc20a2|20516|solute carrier family 20, member 2	AK170985|Slc20a2|20516|solute carrier family 20, member 2	BC046510|Slc20a2|20516|solute carrier family 20, member 2	AK157206|Slc20a2|20516|solute carrier family 20, member 2	AK087507|Slc20a2|20516|solute carrier family 20, member 2
mm9_v1_chr4_+_154998952_154998975	0.253893	PAX2.p2	AK135402|Cdk11b|12537|cyclin-dependent kinase 11B
mm9_v1_chr11_-_75993074_75993133	0.253588	PAX2.p2	AK166234|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK159454|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK013422|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK010840|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK010900|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK019139|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK008026|Vps53|68299|vacuolar protein sorting 53 (yeast)	BC034371|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK149966|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK150001|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK019408|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK033495|Vps53|68299|vacuolar protein sorting 53 (yeast)	AK167310|Vps53|68299|vacuolar protein sorting 53 (yeast)	NM_026664|Vps53|68299|vacuolar protein sorting 53 (yeast)
mm9_v1_chr3_+_96531649_96531738	0.253528	PAX2.p2	AK008329|Rnf115|67845|ring finger protein 115
mm9_v1_chr19_+_54018795_54018795	0.251912	PAX2.p2	BC083060|Shoc2|56392|soc-2 (suppressor of clear) homolog (C. elegans)	NM_001168505|Shoc2|56392|soc-2 (suppressor of clear) homolog (C. elegans)
mm9_v1_chr3_+_87946259_87946350	0.251267	PAX2.p2	AK155778|Mef2d|17261|myocyte enhancer factor 2D	NM_133665|Mef2d|17261|myocyte enhancer factor 2D	AK141270|Mef2d|17261|myocyte enhancer factor 2D	BC011070|Mef2d|17261|myocyte enhancer factor 2D
mm9_v1_chr17_+_34973963_34973993	0.251138	PAX2.p2	NM_001163770|Dom3z|112403|DOM-3 homolog Z (C. elegans)	NM_033613|Dom3z|112403|DOM-3 homolog Z (C. elegans)
mm9_v1_chr13_+_113078658_113078796	0.250637	PAX2.p2	AK039553|Ankrd55|77318|ankyrin repeat domain 55	NM_001168403|Ankrd55|77318|ankyrin repeat domain 55	NM_001168405|Ankrd55|77318|ankyrin repeat domain 55	NM_029898|Ankrd55|77318|ankyrin repeat domain 55	AK081197|Ankrd55|77318|ankyrin repeat domain 55	NM_001168404|Ankrd55|77318|ankyrin repeat domain 55	AK140417|Ankrd55|77318|ankyrin repeat domain 55
mm9_v1_chr16_+_21423190_21423247	0.250505	PAX2.p2	NM_001081366|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	AK122375|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)
mm9_v1_chr10_-_77875707_77875787	0.250231	PAX2.p2	BC065994|Rrp1|18114|ribosomal RNA processing 1 homolog (S. cerevisiae)	AK077540|Rrp1|18114|ribosomal RNA processing 1 homolog (S. cerevisiae)	BC022910|Rrp1|18114|ribosomal RNA processing 1 homolog (S. cerevisiae)	U79773|Rrp1|18114|ribosomal RNA processing 1 homolog (S. cerevisiae)	U79774|Rrp1|18114|ribosomal RNA processing 1 homolog (S. cerevisiae)	BC065993|Rrp1|18114|ribosomal RNA processing 1 homolog (S. cerevisiae)	NM_010925|Rrp1|18114|ribosomal RNA processing 1 homolog (S. cerevisiae)
mm9_v1_chr6_-_71390481_71390504	0.249641	PAX2.p2	BC050876|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr18_-_80348164_80348258	0.249564	PAX2.p2	AB093268|Adnp2|240442|ADNP homeobox 2	NM_175028|Adnp2|240442|ADNP homeobox 2
mm9_v1_chr2_+_127073631_127073743	0.249502	PAX2.p2	AK165880|Tmem127|69470|transmembrane protein 127	AK030324|Tmem127|69470|transmembrane protein 127	BC049832|Tmem127|69470|transmembrane protein 127	NM_175145|Tmem127|69470|transmembrane protein 127	AK050216|Tmem127|69470|transmembrane protein 127
mm9_v1_chr4_+_129138924_129138934	0.24918	PAX2.p2	AK037201|Bsdc1|100383|BSD domain containing 1	AK084857|Bsdc1|100383|BSD domain containing 1	AK144053|Bsdc1|100383|BSD domain containing 1
mm9_v1_chr4_+_101180580_101180604	0.248595	PAX2.p2	NM_001164584|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_001164585|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK030374|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK122293|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr9_-_13631343_13631398	0.248224	PAX2.p2	AY225093|Cep57|74360|centrosomal protein 57	AK028458|Cep57|74360|centrosomal protein 57	AK028408|Cep57|74360|centrosomal protein 57
mm9_v1_chr6_-_5248235_5248333	0.248091	PAX2.p2	BC037140|Pon2|330260|paraoxonase 2	L48514|Pon2|330260|paraoxonase 2	AK152351|Pon2|330260|paraoxonase 2	AK171926|Pon2|330260|paraoxonase 2	BC021887|Pon2|330260|paraoxonase 2
mm9_v1_chr19_+_5637712_5637737	0.247861	PAX2.p2	BC003818|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr15_+_78707972_78708024	0.247234	PAX2.p2	BC054422|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1	AK170437|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1	AK155195|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1	AK080881|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1	AK159771|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1
mm9_v1_chr3_-_122687238_122687429	0.247193	PAX2.p2	AK040332|Usp53|99526|ubiquitin specific peptidase 53	AK140453|Usp53|99526|ubiquitin specific peptidase 53	BC096383|Usp53|99526|ubiquitin specific peptidase 53	AK036876|Usp53|99526|ubiquitin specific peptidase 53	NM_133857|Usp53|99526|ubiquitin specific peptidase 53	AK030317|Usp53|99526|ubiquitin specific peptidase 53	AK045953|Usp53|99526|ubiquitin specific peptidase 53
mm9_v1_chr12_-_70683972_70684096	0.24669	PAX2.p2	AK144832|Gm71|207965|predicted gene 71	AK083148|Gm71|207965|predicted gene 71	NM_001033236|Gm71|207965|predicted gene 71	BC138942|Gm71|207965|predicted gene 71	BC138943|Gm71|207965|predicted gene 71	BC145471|Gm71|207965|predicted gene 71
mm9_v1_chr1_-_59030272_59030346	0.246143	PAX2.p2	AK036650|Trak2|70827|trafficking protein, kinesin binding 2	AK048261|Trak2|70827|trafficking protein, kinesin binding 2	AK014647|Trak2|70827|trafficking protein, kinesin binding 2	NM_172406|Trak2|70827|trafficking protein, kinesin binding 2
mm9_v1_chr11_-_20641455_20641486	0.245874	PAX2.p2	AK029681|Aftph|216549|aftiphilin	AK138793|Aftph|216549|aftiphilin	BC052036|Aftph|216549|aftiphilin	NM_181411|Aftph|216549|aftiphilin
mm9_v1_chr2_+_92755251_92755331	0.244574	PAX2.p2	AK044038|Syt13|80976|synaptotagmin XIII	AK082425|Syt13|80976|synaptotagmin XIII	AK083803|Syt13|80976|synaptotagmin XIII	NM_030725|Syt13|80976|synaptotagmin XIII	BC030907|Syt13|80976|synaptotagmin XIII	AK049840|Syt13|80976|synaptotagmin XIII	AB048947|Syt13|80976|synaptotagmin XIII
mm9_v1_chr18_-_56732585_56732592	0.244368	PAX2.p2	NM_001127338|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr11_-_120852331_120852436	0.243823	PAX2.p2	AK143534|Csnk1d|104318|casein kinase 1, delta	AK140317|Csnk1d|104318|casein kinase 1, delta	AK150387|Csnk1d|104318|casein kinase 1, delta	AK150815|Csnk1d|104318|casein kinase 1, delta	AK088642|Csnk1d|104318|casein kinase 1, delta	AK157812|Csnk1d|104318|casein kinase 1, delta	AK004606|Csnk1d|104318|casein kinase 1, delta
mm9_v1_chr10_-_121023773_121023881	0.243382	PAX2.p2	AK083214|Tbk1|56480|TANK-binding kinase 1	AK004649|Tbk1|56480|TANK-binding kinase 1	AK168193|Tbk1|56480|TANK-binding kinase 1	NM_019786|Tbk1|56480|TANK-binding kinase 1
mm9_v1_chr3_-_126865259_126865312	0.242949	PAX2.p2	AK083111|Ank2|109676|ankyrin 2, brain
mm9_v1_chr5_+_135462067_135462135	0.242007	PAX2.p2	AK002672|Cldn3|12739|claudin 3	NM_009902|Cldn3|12739|claudin 3	AK006514|Cldn3|12739|claudin 3	AK012677|Cldn3|12739|claudin 3
mm9_v1_chr7_+_109054350_109054514	0.24168	PAX2.p2	NM_025605|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK010247|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK013389|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC126973|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK144476|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC020142|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK003509|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC092062|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK009320|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	BC096412|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK019947|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene	AK203171|2400001E08Rik|66508|RIKEN cDNA 2400001E08 gene
mm9_v1_chr5_-_131783731_131783795	0.241542	PAX2.p2	AK051382|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)	AK051281|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)
mm9_v1_chr9_-_60497537_60497561	0.241412	PAX2.p2	AK082406|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr1_+_139795165_139795180	0.240838	PAX2.p2	AK080376|A630083H20Rik|320863|RIKEN cDNA A630083H20 gene	AK040011|A630083H20Rik|320863|RIKEN cDNA A630083H20 gene
mm9_v1_chr19_+_4097344_4097450	0.240016	PAX2.p2	AK012121|Cdk2ap2|52004|CDK2-associated protein 2	AK018035|Cdk2ap2|52004|CDK2-associated protein 2	NM_026373|Cdk2ap2|52004|CDK2-associated protein 2	AK003686|Cdk2ap2|52004|CDK2-associated protein 2
mm9_v1_chr16_+_17759703_17759801	0.239655	PAX2.p2	NM_145479|Klhl22|224023|kelch-like 22 (Drosophila)	AK086748|Klhl22|224023|kelch-like 22 (Drosophila)	AK012046|Klhl22|224023|kelch-like 22 (Drosophila)	AK028197|Klhl22|224023|kelch-like 22 (Drosophila)	AK030669|Klhl22|224023|kelch-like 22 (Drosophila)	AK143514|Klhl22|224023|kelch-like 22 (Drosophila)
mm9_v1_chr2_+_179777363_179777404	0.239285	PAX2.p2	BC053087|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr12_+_16901918_16901995	0.239243	PAX2.p2	AK144687|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2	AK163082|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2	AK150181|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2	DQ864977|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2	U58513|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2
mm9_v1_chr8_-_88364846_88364855	0.238737	PAX2.p2	NM_028007|Itfg1|71927|integrin alpha FG-GAP repeat containing 1
mm9_v1_chr16_+_21423263_21423279	0.238214	PAX2.p2	AK141678|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	AK149336|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	BC055323|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)
mm9_v1_chr9_+_100544186_100544228	0.237662	PAX2.p2	BC069841|Stag1|20842|stromal antigen 1
mm9_v1_chr8_+_3515373_3515441	0.237222	PAX2.p2	AF173829|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_001122818|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_015801|Pnpla6|50767|patatin-like phospholipase domain containing 6	AK040720|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC054789|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC056999|Pnpla6|50767|patatin-like phospholipase domain containing 6
mm9_v1_chr5_+_73684087_73684090	0.236539	PAX2.p2	AK082781|Ociad1|68095|OCIA domain containing 1
mm9_v1_chr7_+_135047661_135047661	0.236535	PAX2.p2	AK075602|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr1_+_137043277_137043554	0.236237	PAX2.p2	BC018479|Arl8a|68724|ADP-ribosylation factor-like 8A	NM_026823|Arl8a|68724|ADP-ribosylation factor-like 8A	AB185207|Arl8a|68724|ADP-ribosylation factor-like 8A
mm9_v1_chr2_+_167514414_167514452	0.236157	PAX2.p2	NM_009883|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta	X62600|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chrX_-_101176600_101176631	0.235646	PAX2.p2	AK013207|Rlim|19820|ring finger protein, LIM domain interacting	AK029295|Rlim|19820|ring finger protein, LIM domain interacting	AK163276|Rlim|19820|ring finger protein, LIM domain interacting	NM_011276|Rlim|19820|ring finger protein, LIM domain interacting
mm9_v1_chr17_+_29169579_29169604	0.23522	PAX2.p2	NM_013663|Srsf3|20383|serine/arginine-rich splicing factor 3
mm9_v1_chr11_-_69734369_69734464	0.234527	PAX2.p2	AY129328|Eif5a|276770|eukaryotic translation initiation factor 5A	AY129329|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166592|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166594|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr9_-_41932211_41932212	0.233588	PAX2.p2	AK155045|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing
mm9_v1_chr10_+_120802099_120802365	0.233554	PAX2.p2	AK040524|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK049162|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK054046|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	NM_029364|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK030773|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK135016|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK170791|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	BC055328|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK087265|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK149863|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK165917|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK169485|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK165180|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK164907|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK083597|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK159562|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK197322|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK200155|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK205939|Gns|75612|glucosamine (N-acetyl)-6-sulfatase
mm9_v1_chr19_-_11893431_11893451	0.232479	PAX2.p2	AK171135|Stx3|20908|syntaxin 3
mm9_v1_chr14_+_21113911_21113999	0.231867	PAX2.p2	NM_026341|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	AK161922|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	AK017031|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC049948|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC056982|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC040807|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC021366|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC038023|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC037091|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13
mm9_v1_chr12_+_81745254_81745279	0.230967	PAX2.p2	BC043112|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr2_+_34657837_34657902	0.230797	PAX2.p2	AK019757|4930550L05Rik|78040|RIKEN cDNA 4930550L05 gene
mm9_v1_chr8_-_86794243_86794302	0.23065	PAX2.p2	AK015911|Ccdc130|67736|coiled-coil domain containing 130	NM_026350|Ccdc130|67736|coiled-coil domain containing 130
mm9_v1_chr16_+_18877336_18877523	0.230496	PAX2.p2	X92590|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X75295|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X99712|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)
mm9_v1_chr11_-_70501586_70501625	0.229524	PAX2.p2	NM_001190376|Camta2|216874|calmodulin binding transcription activator 2	NM_001190378|Camta2|216874|calmodulin binding transcription activator 2	NM_001190379|Camta2|216874|calmodulin binding transcription activator 2	NM_178116|Camta2|216874|calmodulin binding transcription activator 2
mm9_v1_chr1_+_193730645_193730708	0.228973	PAX2.p2	AK145100|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	NM_009579|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	BC052166|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1
mm9_v1_chr11_+_77744280_77744540	0.22807	PAX2.p2	AK165757|Sez6|20370|seizure related gene 6	BC055345|Sez6|20370|seizure related gene 6	AK220513|Sez6|20370|seizure related gene 6	AB206791|Sez6|20370|seizure related gene 6	AK032277|Sez6|20370|seizure related gene 6	AK147705|Sez6|20370|seizure related gene 6	BC053011|Sez6|20370|seizure related gene 6	NM_021286|Sez6|20370|seizure related gene 6	D29763|Sez6|20370|seizure related gene 6	D64009|Sez6|20370|seizure related gene 6	D64010|Sez6|20370|seizure related gene 6
mm9_v1_chr4_+_19502296_19502357	0.227422	PAX2.p2	AK002442|Fam82b|66302|family with sequence similarity 82, member B	AK010421|Fam82b|66302|family with sequence similarity 82, member B	AK160266|Fam82b|66302|family with sequence similarity 82, member B	AK019968|Fam82b|66302|family with sequence similarity 82, member B	BC025158|Fam82b|66302|family with sequence similarity 82, member B	AK029446|Fam82b|66302|family with sequence similarity 82, member B	AK009059|Fam82b|66302|family with sequence similarity 82, member B
mm9_v1_chr11_-_86497242_86497360	0.2267	PAX2.p2	AX775963|Tmem49|75909|transmembrane protein 49	AK019443|Tmem49|75909|transmembrane protein 49	AK049559|Tmem49|75909|transmembrane protein 49	BC004013|Tmem49|75909|transmembrane protein 49	AK077443|Tmem49|75909|transmembrane protein 49	AK043091|Tmem49|75909|transmembrane protein 49	NM_029478|Tmem49|75909|transmembrane protein 49	AB047550|Tmem49|75909|transmembrane protein 49	AK167173|Tmem49|75909|transmembrane protein 49	AK167202|Tmem49|75909|transmembrane protein 49	AK016312|Tmem49|75909|transmembrane protein 49	AK159468|Tmem49|75909|transmembrane protein 49
mm9_v1_chr9_+_15043488_15043639	0.226303	PAX2.p2	AK008621|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene	AK034938|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene	NM_026955|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene	BC055786|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene
mm9_v1_chrX_+_69062091_69062188	0.226266	PAX2.p2	NM_001081356|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK049488|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK138582|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK011632|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK008848|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK045401|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK164163|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AJ748652|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	BC094639|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK049296|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	BC028317|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
mm9_v1_chr2_+_129024496_129024619	0.226208	PAX2.p2	NM_001159593|Slc20a1|20515|solute carrier family 20, member 1	NM_015747|Slc20a1|20515|solute carrier family 20, member 1	AK084159|Slc20a1|20515|solute carrier family 20, member 1	AK155506|Slc20a1|20515|solute carrier family 20, member 1	AK035898|Slc20a1|20515|solute carrier family 20, member 1	AK089184|Slc20a1|20515|solute carrier family 20, member 1	AK003059|Slc20a1|20515|solute carrier family 20, member 1	BC015085|Slc20a1|20515|solute carrier family 20, member 1
mm9_v1_chr16_-_57231484_57231596	0.22605	PAX2.p2	AK171591|Tbc1d23|67581|TBC1 domain family, member 23	BC031706|Tbc1d23|67581|TBC1 domain family, member 23	NM_026254|Tbc1d23|67581|TBC1 domain family, member 23	AK155142|Tbc1d23|67581|TBC1 domain family, member 23
mm9_v1_chr10_-_53099656_53099696	0.225123	PAX2.p2	AK039734|Gm9766|100038725|predicted gene 9766
mm9_v1_chr14_-_52899101_52899219	0.224445	PAX2.p2	AK160249|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr14_+_55512965_55513167	0.224262	PAX2.p2	NM_019402|Pabpn1|54196|poly(A) binding protein, nuclear 1	AK032172|Pabpn1|54196|poly(A) binding protein, nuclear 1	BC055866|Pabpn1|54196|poly(A) binding protein, nuclear 1	AK157143|Pabpn1|54196|poly(A) binding protein, nuclear 1	BC049869|Pabpn1|54196|poly(A) binding protein, nuclear 1
mm9_v1_chr2_-_65076471_65076554	0.22378	PAX2.p2	AK173076|Cobll1|319876|Cobl-like 1
mm9_v1_chr10_+_98377759_98377828	0.223487	PAX2.p2	AK133920|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	NM_026482|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK170163|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	BC024831|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK170926|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr10_+_42398721_42398783	0.22294	PAX2.p2	AK044897|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AF533890|Ostm1|14628|osteopetrosis associated transmembrane protein 1	NM_172416|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK004546|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK050513|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK053664|Ostm1|14628|osteopetrosis associated transmembrane protein 1	BC057635|Ostm1|14628|osteopetrosis associated transmembrane protein 1
mm9_v1_chr8_+_37520601_37520649	0.222251	PAX2.p2	AK032504|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene	AK038497|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene	AK089162|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene
mm9_v1_chr15_-_81846579_81846596	0.222149	PAX2.p2	BC022097|Pppde2|28075|PPPDE peptidase domain containing 2	AK146155|Pppde2|28075|PPPDE peptidase domain containing 2
mm9_v1_chr14_-_19726121_19726326	0.221947	PAX2.p2	BC016265|Ube2e2|218793|ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast)	NM_144839|Ube2e2|218793|ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast)
mm9_v1_chr9_+_123060096_123060130	0.221293	PAX2.p2	BC035043|Clec3b|21922|C-type lectin domain family 3, member b
mm9_v1_chr11_-_5965544_5965554	0.221264	PAX2.p2	BC080273|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta
mm9_v1_chr12_+_82046496_82046547	0.22117	PAX2.p2	AK002267|Srsf5|20384|serine/arginine-rich splicing factor 5	AK005552|Srsf5|20384|serine/arginine-rich splicing factor 5	AK007729|Srsf5|20384|serine/arginine-rich splicing factor 5	AK142009|Srsf5|20384|serine/arginine-rich splicing factor 5	AK146624|Srsf5|20384|serine/arginine-rich splicing factor 5	AK078065|Srsf5|20384|serine/arginine-rich splicing factor 5	BC082593|Srsf5|20384|serine/arginine-rich splicing factor 5	BC085267|Srsf5|20384|serine/arginine-rich splicing factor 5	BC038624|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr11_+_116938138_116938176	0.220495	PAX2.p2	BC037520|2810008D09Rik|76972|RIKEN cDNA 2810008D09 gene
mm9_v1_chr17_+_64213350_64213395	0.220464	PAX2.p2	AK021175|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2	AK157828|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2
mm9_v1_chr4_-_41670160_41670212	0.21969	PAX2.p2	AF098508|Dctn3|53598|dynactin 3	AK003255|Dctn3|53598|dynactin 3	BC061120|Dctn3|53598|dynactin 3	AK002720|Dctn3|53598|dynactin 3	AK011840|Dctn3|53598|dynactin 3	AK159344|Dctn3|53598|dynactin 3	NM_001159565|Dctn3|53598|dynactin 3	NM_016890|Dctn3|53598|dynactin 3
mm9_v1_chr2_-_25316553_25316613	0.21902	PAX2.p2	BC029214|BC029214|227622|cDNA sequence BC029214	NM_153557|BC029214|227622|cDNA sequence BC029214
mm9_v1_chr11_+_116060160_116060223	0.218451	PAX2.p2	NM_027107|2310004N24Rik|69535|RIKEN cDNA 2310004N24 gene	AK146257|2310004N24Rik|69535|RIKEN cDNA 2310004N24 gene	AK009156|2310004N24Rik|69535|RIKEN cDNA 2310004N24 gene	BC027639|2310004N24Rik|69535|RIKEN cDNA 2310004N24 gene
mm9_v1_chr2_-_84518208_84518278	0.21841	PAX2.p2	AK170587|Tmx2|66958|thioredoxin-related transmembrane protein 2	AK145245|Tmx2|66958|thioredoxin-related transmembrane protein 2
mm9_v1_chr11_-_6100164_6100207	0.217702	PAX2.p2	AK049739|Nudcd3|209586|NudC domain containing 3	AK171224|Nudcd3|209586|NudC domain containing 3	BC024322|Nudcd3|209586|NudC domain containing 3	AK046219|Nudcd3|209586|NudC domain containing 3	AK030050|Nudcd3|209586|NudC domain containing 3	AK159391|Nudcd3|209586|NudC domain containing 3	AK159458|Nudcd3|209586|NudC domain containing 3	AK170329|Nudcd3|209586|NudC domain containing 3	AK169797|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr10_+_13686829_13686966	0.21747	PAX2.p2	AK040673|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK172056|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2
mm9_v1_chr7_-_82453166_82453213	0.217229	PAX2.p2	AK139478|Sv2b|64176|synaptic vesicle glycoprotein 2 b	AK140104|Sv2b|64176|synaptic vesicle glycoprotein 2 b	AK035927|Sv2b|64176|synaptic vesicle glycoprotein 2 b	AK043830|Sv2b|64176|synaptic vesicle glycoprotein 2 b
mm9_v1_chr8_+_113142814_113142867	0.216085	PAX2.p2	AK211750|Vac14|234729|Vac14 homolog (S. cerevisiae)
mm9_v1_chr3_+_85946678_85946708	0.215869	PAX2.p2	
mm9_v1_chr2_+_59322709_59322728	0.215671	PAX2.p2	NM_029723|Dapl1|76747|death associated protein-like 1	AK009567|Dapl1|76747|death associated protein-like 1	BC116916|Dapl1|76747|death associated protein-like 1	BC116920|Dapl1|76747|death associated protein-like 1	BC063096|Dapl1|76747|death associated protein-like 1	BC052745|Dapl1|76747|death associated protein-like 1
mm9_v1_chr9_+_103014279_103014299	0.214902	PAX2.p2	AK082732|Rab6b|270192|RAB6B, member RAS oncogene family
mm9_v1_chr2_-_102241053_102241195	0.214852	PAX2.p2	AJ278191|Trim44|80985|tripartite motif-containing 44	NM_020267|Trim44|80985|tripartite motif-containing 44
mm9_v1_chr16_+_38089536_38089600	0.21467	PAX2.p2	AK171482|Gsk3b|56637|glycogen synthase kinase 3 beta
mm9_v1_chr13_-_38619746_38619798	0.214598	PAX2.p2	AK224996|Txndc5|105245|thioredoxin domain containing 5	AK224981|Txndc5|105245|thioredoxin domain containing 5	AK225017|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr11_-_50051989_50052021	0.214337	PAX2.p2	BC038518|Ltc4s|17001|leukotriene C4 synthase
mm9_v1_chr2_-_168567602_168567660	0.213696	PAX2.p2	AK082271|Atp9a|11981|ATPase, class II, type 9A
mm9_v1_chr5_+_109058850_109059020	0.213676	PAX2.p2	AK034579|Tmem175|72392|transmembrane protein 175	AK038865|Tmem175|72392|transmembrane protein 175	AK076446|Tmem175|72392|transmembrane protein 175	AK082765|Tmem175|72392|transmembrane protein 175	AK170273|Tmem175|72392|transmembrane protein 175	AK013879|Tmem175|72392|transmembrane protein 175	BC005542|Tmem175|72392|transmembrane protein 175
mm9_v1_chr9_+_4309907_4309917	0.212971	PAX2.p2	AK034334|Kbtbd3|69149|kelch repeat and BTB (POZ) domain containing 3	BC027392|Kbtbd3|69149|kelch repeat and BTB (POZ) domain containing 3
mm9_v1_chr10_-_42894259_42894340	0.212484	PAX2.p2	BC059851|Sobp|109205|sine oculis-binding protein homolog (Drosophila)	NM_175407|Sobp|109205|sine oculis-binding protein homolog (Drosophila)
mm9_v1_chr9_+_43552046_43552085	0.212403	PAX2.p2	AK147479|Pvrl1|58235|poliovirus receptor-related 1
mm9_v1_chr5_-_31495395_31495419	0.212303	PAX2.p2	BC021884|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	AK154364|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	AK158282|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta
mm9_v1_chr3_-_27795287_27795289	0.212271	PAX2.p2	AK053134|Tmem212|208613|transmembrane protein 212	BC119391|Tmem212|208613|transmembrane protein 212	BC119393|Tmem212|208613|transmembrane protein 212	NM_001164437|Tmem212|208613|transmembrane protein 212
mm9_v1_chr17_+_45700882_45700945	0.212238	PAX2.p2	AK155551|Slc35b2|73836|solute carrier family 35, member B2	AK144403|Slc35b2|73836|solute carrier family 35, member B2	AK003377|Slc35b2|73836|solute carrier family 35, member B2	AK090329|Slc35b2|73836|solute carrier family 35, member B2	AK152362|Slc35b2|73836|solute carrier family 35, member B2	BC025875|Slc35b2|73836|solute carrier family 35, member B2	BC036992|Slc35b2|73836|solute carrier family 35, member B2	AF414190|Slc35b2|73836|solute carrier family 35, member B2	AK154868|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr3_+_89006824_89006905	0.211976	PAX2.p2	AK082767|Gba|14466|glucosidase, beta, acid	NM_001077411|Gba|14466|glucosidase, beta, acid	AK201806|Gba|14466|glucosidase, beta, acid	AK166198|Gba|14466|glucosidase, beta, acid	BC006663|Gba|14466|glucosidase, beta, acid	NM_008094|Gba|14466|glucosidase, beta, acid	AK152745|Gba|14466|glucosidase, beta, acid
mm9_v1_chr1_+_89652595_89652635	0.211819	PAX2.p2	AK134333|Atg16l1|77040|autophagy-related 16-like 1 (yeast)
mm9_v1_chr16_+_57121995_57122259	0.211785	PAX2.p2	AK181660|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK192263|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK195397|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK196165|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK202736|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chr19_+_41986360_41986656	0.211276	PAX2.p2	NM_023418|Pgam1|18648|phosphoglycerate mutase 1	BC002241|Pgam1|18648|phosphoglycerate mutase 1	BC106139|Pgam1|18648|phosphoglycerate mutase 1	BC005661|Pgam1|18648|phosphoglycerate mutase 1	AF283667|Pgam1|18648|phosphoglycerate mutase 1	AK004921|Pgam1|18648|phosphoglycerate mutase 1	AK009905|Pgam1|18648|phosphoglycerate mutase 1	AK144681|Pgam1|18648|phosphoglycerate mutase 1	AK153202|Pgam1|18648|phosphoglycerate mutase 1	AK159305|Pgam1|18648|phosphoglycerate mutase 1	AK150716|Pgam1|18648|phosphoglycerate mutase 1	AK152443|Pgam1|18648|phosphoglycerate mutase 1	AK165410|Pgam1|18648|phosphoglycerate mutase 1	AK168949|Pgam1|18648|phosphoglycerate mutase 1	BC083090|Pgam1|18648|phosphoglycerate mutase 1	BC066844|Pgam1|18648|phosphoglycerate mutase 1
mm9_v1_chr16_+_20097626_20097705	0.209907	PAX2.p2	NM_029436|Klhl24|75785|kelch-like 24 (Drosophila)	AK015239|Klhl24|75785|kelch-like 24 (Drosophila)	AK044892|Klhl24|75785|kelch-like 24 (Drosophila)
mm9_v1_chrX_+_12164878_12165013	0.209856	PAX2.p2	NM_027439|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK168139|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK076495|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK017482|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK151735|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK029405|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AB192471|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	BC014706|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2
mm9_v1_chr4_-_151401689_151401729	0.208839	PAX2.p2	AM161454|Zbtb48|100090|zinc finger and BTB domain containing 48
mm9_v1_chr7_-_149246757_149246816	0.208831	PAX2.p2	AK158674|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene
mm9_v1_chr2_+_3430246_3430348	0.208668	PAX2.p2	AK034009|Cdnf|227526|cerebral dopamine neurotrophic factor	NM_177647|Cdnf|227526|cerebral dopamine neurotrophic factor	BC110560|Cdnf|227526|cerebral dopamine neurotrophic factor
mm9_v1_chr10_+_120471255_120471291	0.208574	PAX2.p2	BC013268|Wif1|24117|Wnt inhibitory factor 1	AF122923|Wif1|24117|Wnt inhibitory factor 1
mm9_v1_chr10_+_82092582_82092692	0.207997	PAX2.p2	NM_011561|Tdg|21665|thymine DNA glycosylase	NM_172552|Tdg|21665|thymine DNA glycosylase	AK089915|Gm9855|624784|thymine DNA glycosylase pseudogene	BC085471|Tdg|21665|thymine DNA glycosylase	AK164643|Tdg|21665|thymine DNA glycosylase	AK166357|Tdg|21665|thymine DNA glycosylase	AK164090|Tdg|21665|thymine DNA glycosylase	AF069519|Gm9855|624784|thymine DNA glycosylase pseudogene	BC085470|Tdg|21665|thymine DNA glycosylase	AK053870|Tdg|21665|thymine DNA glycosylase	AK169768|Tdg|21665|thymine DNA glycosylase	BC010315|Tdg|21665|thymine DNA glycosylase
mm9_v1_chr7_+_94732677_94732677	0.207403	PAX2.p2	NM_001081414|Grm5|108071|glutamate receptor, metabotropic 5	NM_001143834|Grm5|108071|glutamate receptor, metabotropic 5
mm9_v1_chr3_+_95733228_95733353	0.205841	PAX2.p2	U89345|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK168380|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC080684|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC005690|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK202920|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK076049|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr3_-_146433200_146433208	0.20544	PAX2.p2	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr9_-_103267697_103267728	0.205263	PAX2.p2	AB046372|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3
mm9_v1_chr13_-_14615371_14615494	0.205042	PAX2.p2	AK051569|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK084246|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK086170|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK047678|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_001081348|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK053694|Hecw1|94253|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chrX_-_83021840_83022157	0.204549	PAX2.p2	U48403|Gyk|14933|glycerol kinase	AK008186|Gyk|14933|glycerol kinase	BC003767|Gyk|14933|glycerol kinase	AK169424|Gyk|14933|glycerol kinase	AK088373|Gyk|14933|glycerol kinase	AK044308|Gyk|14933|glycerol kinase	AK169525|Gyk|14933|glycerol kinase	NM_008194|Gyk|14933|glycerol kinase	NM_212444|Gyk|14933|glycerol kinase
mm9_v1_chr10_+_79379715_79379715	0.202776	PAX2.p2	AK039628|Kiss1r|114229|KISS1 receptor	AK139303|Kiss1r|114229|KISS1 receptor	NM_053244|Kiss1r|114229|KISS1 receptor
mm9_v1_chr8_+_63111621_63111675	0.202761	PAX2.p2	AK089654|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_027756|Mfap3l|71306|microfibrillar-associated protein 3-like	BC095950|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr11_+_49838770_49838986	0.202744	PAX2.p2	BC018199|Rnf130|59044|ring finger protein 130	NM_021540|Rnf130|59044|ring finger protein 130	AK011088|Rnf130|59044|ring finger protein 130	BC048901|Rnf130|59044|ring finger protein 130	AK220529|Rnf130|59044|ring finger protein 130	AF171875|Rnf130|59044|ring finger protein 130	AK166468|Rnf130|59044|ring finger protein 130
mm9_v1_chr11_+_29592946_29593072	0.2025	PAX2.p2	AK220511|Rtn4|68585|reticulon 4	AY102281|Rtn4|68585|reticulon 4	AY102282|Rtn4|68585|reticulon 4	AY102284|Rtn4|68585|reticulon 4	AY114152|Rtn4|68585|reticulon 4	AY114153|Rtn4|68585|reticulon 4	AK034902|Rtn4|68585|reticulon 4	BC056373|Rtn4|68585|reticulon 4
mm9_v1_chr13_-_114408704_114408818	0.201667	PAX2.p2	AK052343|Snx18|170625|sorting nexin 18	BC137801|Snx18|170625|sorting nexin 18	BC145951|Snx18|170625|sorting nexin 18	AF408408|Snx18|170625|sorting nexin 18	AK155955|Snx18|170625|sorting nexin 18	AK143645|Snx18|170625|sorting nexin 18	BC063089|Snx18|170625|sorting nexin 18	NM_130796|Snx18|170625|sorting nexin 18
mm9_v1_chr10_-_126558207_126558220	0.201296	PAX2.p2	NM_001171026|Os9|216440|amplified in osteosarcoma	NM_177614|Os9|216440|amplified in osteosarcoma
mm9_v1_chr9_+_40590943_40591093	0.201226	PAX2.p2	AK033766|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr4_+_21774729_21774865	0.200782	PAX2.p2	NM_025669|Sfrs18|66625|serine/arginine-rich splicing factor 18	BC141031|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr7_-_4741145_4741257	0.200117	PAX2.p2	AK008900|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene	NM_029384|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene	BC132101|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene	BC144965|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene
mm9_v1_chr11_+_95198329_95198359	0.19924	PAX2.p2	AK077747|Fam117a|215512|family with sequence similarity 117, memberA	AK143632|Fam117a|215512|family with sequence similarity 117, memberA	AK165378|Fam117a|215512|family with sequence similarity 117, memberA	AK167417|Fam117a|215512|family with sequence similarity 117, memberA	NM_172543|Fam117a|215512|family with sequence similarity 117, memberA	BC055690|Fam117a|215512|family with sequence similarity 117, memberA
mm9_v1_chr17_-_46683249_46683336	0.199153	PAX2.p2	AK147675|Cul9|78309|cullin 9	NM_001081335|Cul9|78309|cullin 9
mm9_v1_chr8_+_124900561_124900686	0.199057	PAX2.p2	AK166802|Zc3h18|76014|zinc finger CCCH-type containing 18	AK031413|Zc3h18|76014|zinc finger CCCH-type containing 18	AK159881|Zc3h18|76014|zinc finger CCCH-type containing 18	BC003319|Zc3h18|76014|zinc finger CCCH-type containing 18
mm9_v1_chr7_+_35904310_35904321	0.198169	PAX2.p2	NM_007678|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC011118|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC028890|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC051102|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC058161|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha
mm9_v1_chrX_+_33735898_33735993	0.198114	PAX2.p2	NM_028325|Zcchc12|72693|zinc finger, CCHC domain containing 12	BC049071|Zcchc12|72693|zinc finger, CCHC domain containing 12	BC055714|Zcchc12|72693|zinc finger, CCHC domain containing 12	AK012833|Zcchc12|72693|zinc finger, CCHC domain containing 12
mm9_v1_chr12_+_75385267_75385319	0.196795	PAX2.p2	AK007020|1700086L19Rik|74284|RIKEN cDNA 1700086L19 gene
mm9_v1_chr10_+_40603330_40603398	0.196631	PAX2.p2	NM_031877|Wasf1|83767|WASP family 1	BC053423|Wasf1|83767|WASP family 1	BC016896|Wasf1|83767|WASP family 1
mm9_v1_chr12_-_84938063_84938077	0.196212	PAX2.p2	AK090334|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr11_+_102977638_102977680	0.196022	PAX2.p2	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr17_+_64213326_64213348	0.19573	PAX2.p2	AK165973|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2
mm9_v1_chr7_+_141862431_141862467	0.195375	PAX2.p2	AK195009|Dock1|330662|dedicator of cytokinesis 1
mm9_v1_chr7_+_123587067_123587088	0.19523	PAX2.p2	
mm9_v1_chr13_+_44826700_44826834	0.194767	PAX2.p2	BC050129|Jarid2|16468|jumonji, AT rich interactive domain 2	AK044888|Jarid2|16468|jumonji, AT rich interactive domain 2	BC051010|Jarid2|16468|jumonji, AT rich interactive domain 2	BC026056|Jarid2|16468|jumonji, AT rich interactive domain 2	AK045214|Jarid2|16468|jumonji, AT rich interactive domain 2
mm9_v1_chr18_+_80666460_80666475	0.194391	PAX2.p2	AK085185|Gm9456|669389|predicted gene 9456
mm9_v1_chr3_+_53267587_53267689	0.194295	PAX2.p2	AK034174|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr15_+_78707595_78707620	0.194213	PAX2.p2	BC026802|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1	NM_145929|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1
mm9_v1_chr2_-_130490351_130490380	0.193991	PAX2.p2	BC115616|Ddrgk1|77006|DDRGK domain containing 1	BC115617|Ddrgk1|77006|DDRGK domain containing 1	NM_029832|Ddrgk1|77006|DDRGK domain containing 1
mm9_v1_chr18_+_37975071_37975186	0.193795	PAX2.p2	AK139465|Pcdhgc4|93707|protocadherin gamma subfamily C, 4	AY013812|Pcdhgc4|93707|protocadherin gamma subfamily C, 4
mm9_v1_chr17_-_35183469_35183583	0.193776	PAX2.p2	BC030034|Msh5|17687|mutS homolog 5 (E. coli)	BC141113|Msh5|17687|mutS homolog 5 (E. coli)	BC145406|Msh5|17687|mutS homolog 5 (E. coli)	BC145407|Msh5|17687|mutS homolog 5 (E. coli)	NM_013600|Msh5|17687|mutS homolog 5 (E. coli)	AF146227|Msh5|17687|mutS homolog 5 (E. coli)
mm9_v1_chr18_+_38578583_38578694	0.193635	PAX2.p2	AF220209|Ndfip1|65113|Nedd4 family interacting protein 1	AK050560|Ndfip1|65113|Nedd4 family interacting protein 1	BC026372|Ndfip1|65113|Nedd4 family interacting protein 1	NM_022996|Ndfip1|65113|Nedd4 family interacting protein 1	BC020359|Ndfip1|65113|Nedd4 family interacting protein 1
mm9_v1_chr4_-_133523750_133523927	0.193139	PAX2.p2	X12944|Hmgn2|15331|high mobility group nucleosomal binding domain 2	BC084680|Hmgn2|15331|high mobility group nucleosomal binding domain 2	BC090837|Hmgn2|15331|high mobility group nucleosomal binding domain 2	BC092060|Hmgn2|15331|high mobility group nucleosomal binding domain 2	BC083085|Hmgn2|15331|high mobility group nucleosomal binding domain 2	BC090836|Hmgn2|15331|high mobility group nucleosomal binding domain 2	BC103792|Hmgn2|15331|high mobility group nucleosomal binding domain 2	AK078413|Hmgn2|15331|high mobility group nucleosomal binding domain 2	AK002374|Hmgn2|15331|high mobility group nucleosomal binding domain 2	AK151383|Hmgn2|15331|high mobility group nucleosomal binding domain 2	AK152857|Hmgn2|15331|high mobility group nucleosomal binding domain 2	AK153881|Hmgn2|15331|high mobility group nucleosomal binding domain 2	AK169050|Hmgn2|15331|high mobility group nucleosomal binding domain 2	AK146285|Hmgn2|15331|high mobility group nucleosomal binding domain 2	AK146999|Hmgn2|15331|high mobility group nucleosomal binding domain 2	NM_016957|Hmgn2|15331|high mobility group nucleosomal binding domain 2
mm9_v1_chr5_-_120953567_120953653	0.192032	PAX2.p2	AK030234|Plbd2|71772|phospholipase B domain containing 2	BC026395|Plbd2|71772|phospholipase B domain containing 2	BC038605|Plbd2|71772|phospholipase B domain containing 2	AF217003|Plbd2|71772|phospholipase B domain containing 2	BC060095|Plbd2|71772|phospholipase B domain containing 2	AK164220|Plbd2|71772|phospholipase B domain containing 2	AK170631|Plbd2|71772|phospholipase B domain containing 2	BC048826|Plbd2|71772|phospholipase B domain containing 2	AK043608|Plbd2|71772|phospholipase B domain containing 2	AK046937|Plbd2|71772|phospholipase B domain containing 2	AK150201|Plbd2|71772|phospholipase B domain containing 2	AK170387|Plbd2|71772|phospholipase B domain containing 2	AK032930|Plbd2|71772|phospholipase B domain containing 2	AK042089|Plbd2|71772|phospholipase B domain containing 2	AK029813|Plbd2|71772|phospholipase B domain containing 2	NM_023625|Plbd2|71772|phospholipase B domain containing 2	AK004973|Plbd2|71772|phospholipase B domain containing 2
mm9_v1_chr2_-_65076584_65076777	0.191948	PAX2.p2	AK052533|Cobll1|319876|Cobl-like 1	AK144943|Cobll1|319876|Cobl-like 1	AY308746|Cobll1|319876|Cobl-like 1	BC067007|Cobll1|319876|Cobl-like 1	NM_027225|Cobll1|319876|Cobl-like 1	NM_177025|Cobll1|319876|Cobl-like 1	AK037010|Cobll1|319876|Cobl-like 1
mm9_v1_chr9_-_55785907_55785932	0.191711	PAX2.p2	AK031358|Scaper|244891|S phase cyclin A-associated protein in the ER	AK049497|Scaper|244891|S phase cyclin A-associated protein in the ER	NM_001081341|Scaper|244891|S phase cyclin A-associated protein in the ER	AK048755|Scaper|244891|S phase cyclin A-associated protein in the ER
mm9_v1_chr2_+_31428244_31428356	0.191539	PAX2.p2	NM_001033389|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK166081|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK137035|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK145377|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK166478|Fubp3|320267|far upstream element (FUSE) binding protein 3	AK167671|Fubp3|320267|far upstream element (FUSE) binding protein 3
mm9_v1_chr2_-_132641694_132641790	0.191449	PAX2.p2	BC027565|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	BC052648|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK164396|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK017672|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK165976|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK167222|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK129300|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK028755|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	NM_175113|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK014359|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)
mm9_v1_chr18_-_21054847_21054899	0.19142	PAX2.p2	AK044854|Trappc8|75964|trafficking protein particle complex 8
mm9_v1_chr13_+_13876667_13876805	0.191021	PAX2.p2	BC016506|Gng4|14706|guanine nucleotide binding protein (G protein), gamma 4	NM_010317|Gng4|14706|guanine nucleotide binding protein (G protein), gamma 4
mm9_v1_chr6_-_115626274_115626345	0.190987	PAX2.p2	
mm9_v1_chr3_-_88897207_88897284	0.190945	PAX2.p2	AK039664|Rusc1|72296|RUN and SH3 domain containing 1	BC056360|Rusc1|72296|RUN and SH3 domain containing 1	AK042689|Rusc1|72296|RUN and SH3 domain containing 1	NM_001083807|Rusc1|72296|RUN and SH3 domain containing 1	NM_028188|Rusc1|72296|RUN and SH3 domain containing 1
mm9_v1_chr19_-_23211044_23211093	0.190755	PAX2.p2	AK145685|2410080I02Rik|68248|RIKEN cDNA 2410080I02 gene
mm9_v1_chr1_+_167391489_167391498	0.190592	PAX2.p2	BC018324|Brp44|70456|brain protein 44
mm9_v1_chr11_+_59652927_59652959	0.189788	PAX2.p2	AK035283|Nt5m|103850|5',3'-nucleotidase, mitochondrial
mm9_v1_chr11_+_117515548_117515602	0.189758	PAX2.p2	NM_198022|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr16_-_91011280_91011324	0.189396	PAX2.p2	AK020816|Synj1|104015|synaptojanin 1	AK080946|Synj1|104015|synaptojanin 1	AK049822|Synj1|104015|synaptojanin 1
mm9_v1_chr10_-_127986187_127986227	0.189362	PAX2.p2	NM_018860|Rpl41|67945|ribosomal protein L41
mm9_v1_chr12_+_112776311_112776423	0.189225	PAX2.p2	NM_173363|Eif5|217869|eukaryotic translation initiation factor 5	NM_178041|Eif5|217869|eukaryotic translation initiation factor 5	AK161554|Eif5|217869|eukaryotic translation initiation factor 5	BC039275|Eif5|217869|eukaryotic translation initiation factor 5
mm9_v1_chr3_-_142058595_142058659	0.188893	PAX2.p2	AK147999|Pdlim5|56376|PDZ and LIM domain 5	AK003194|Pdlim5|56376|PDZ and LIM domain 5	AK089779|Pdlim5|56376|PDZ and LIM domain 5	NM_001190852|Pdlim5|56376|PDZ and LIM domain 5	NM_001190853|Pdlim5|56376|PDZ and LIM domain 5	NM_001190854|Pdlim5|56376|PDZ and LIM domain 5	NM_001190855|Pdlim5|56376|PDZ and LIM domain 5	NM_001190856|Pdlim5|56376|PDZ and LIM domain 5	NM_019808|Pdlim5|56376|PDZ and LIM domain 5	NM_019809|Pdlim5|56376|PDZ and LIM domain 5
mm9_v1_chr2_+_157854427_157854433	0.188514	PAX2.p2	AK045404|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B
mm9_v1_chr6_-_85463535_85463588	0.187671	PAX2.p2	NM_020596|Egr4|13656|early growth response 4	AK141637|Egr4|13656|early growth response 4
mm9_v1_chr8_+_59029896_59029998	0.187603	PAX2.p2	AK077595|Fbxo8|50753|F-box protein 8	AK078111|Fbxo8|50753|F-box protein 8	AK012401|Fbxo8|50753|F-box protein 8	AK147748|Fbxo8|50753|F-box protein 8	AK162592|Fbxo8|50753|F-box protein 8	AK002538|Fbxo8|50753|F-box protein 8	BC011100|Fbxo8|50753|F-box protein 8	AF176527|Fbxo8|50753|F-box protein 8	AK029989|Fbxo8|50753|F-box protein 8	NM_015791|Fbxo8|50753|F-box protein 8	AK160145|Fbxo8|50753|F-box protein 8	BC034854|Fbxo8|50753|F-box protein 8
mm9_v1_chr16_-_94748040_94748080	0.187463	PAX2.p2	AK077628|Dscr3|13185|Down syndrome critical region gene 3	AB001990|Dscr3|13185|Down syndrome critical region gene 3	AK077485|Dscr3|13185|Down syndrome critical region gene 3
mm9_v1_chr6_+_134932018_134932018	0.18733	PAX2.p2	NM_001109914|Apold1|381823|apolipoprotein L domain containing 1
mm9_v1_chr2_+_163428044_163428072	0.187045	PAX2.p2	AK039450|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_029512|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_181734|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr8_-_116372637_116372742	0.186629	PAX2.p2	AK035797|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	AK081122|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	NM_172466|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	AK053851|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm9_v1_chr9_-_116084395_116084480	0.186419	PAX2.p2	AK046561|Tgfbr2|21813|transforming growth factor, beta receptor II	AK159327|Tgfbr2|21813|transforming growth factor, beta receptor II	AK148167|Tgfbr2|21813|transforming growth factor, beta receptor II	AK053793|Tgfbr2|21813|transforming growth factor, beta receptor II	NM_009371|Tgfbr2|21813|transforming growth factor, beta receptor II	NM_029575|Tgfbr2|21813|transforming growth factor, beta receptor II
mm9_v1_chr11_+_17059301_17059317	0.186015	PAX2.p2	AK160938|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm9_v1_chrX_+_71032347_71032381	0.185925	PAX2.p2	NM_001166480|Ssr4|20832|signal sequence receptor, delta
mm9_v1_chr2_-_153051118_153051176	0.184219	PAX2.p2	BC058340|Tspyl3|241732|TSPY-like 3	AK148882|Tspyl3|241732|TSPY-like 3	AK167722|Tspyl3|241732|TSPY-like 3	AK134522|Tspyl3|241732|TSPY-like 3	NM_198617|Tspyl3|241732|TSPY-like 3
mm9_v1_chr8_-_23587100_23587150	0.183592	PAX2.p2	AK131902|AI316807|102032|expressed sequence AI316807	AK140957|AI316807|102032|expressed sequence AI316807
mm9_v1_chr7_+_4874478_4874551	0.183055	PAX2.p2	AK163549|Nat14|269854|N-acetyltransferase 14
mm9_v1_chr2_-_143688908_143688908	0.182978	PAX2.p2	BC057580|Bfsp1|12075|beaded filament structural protein 1, in lens-CP94	NM_009751|Bfsp1|12075|beaded filament structural protein 1, in lens-CP94
mm9_v1_chr6_+_77192615_77192722	0.18277	PAX2.p2	AK080836|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	NM_028880|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK014545|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK053345|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr19_+_5088537_5088585	0.182745	PAX2.p2	AK011071|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	AK077329|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	NM_026553|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	AK160409|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)
mm9_v1_chr4_+_115410434_115410451	0.182641	PAX2.p2	AK079503|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene
mm9_v1_chr2_+_174171943_174171964	0.182361	PAX2.p2	
mm9_v1_chr2_+_155890933_155891049	0.181463	PAX2.p2	AK220494|Spag4|245865|sperm associated antigen 4	NM_139151|Spag4|245865|sperm associated antigen 4	AK043812|Spag4|245865|sperm associated antigen 4	AK028080|Spag4|245865|sperm associated antigen 4	BC107321|Spag4|245865|sperm associated antigen 4
mm9_v1_chr8_+_113142480_113142625	0.181369	PAX2.p2	AK084520|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK171577|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK031952|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK043319|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK140191|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK171883|Vac14|234729|Vac14 homolog (S. cerevisiae)	BC052199|Vac14|234729|Vac14 homolog (S. cerevisiae)	NM_146216|Vac14|234729|Vac14 homolog (S. cerevisiae)	AK046826|Vac14|234729|Vac14 homolog (S. cerevisiae)
mm9_v1_chr6_+_115085096_115085107	0.181344	PAX2.p2	BC066004|Syn2|20965|synapsin II	BC085129|Syn2|20965|synapsin II
mm9_v1_chr16_+_7409879_7410026	0.180782	PAX2.p2	AK034297|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr11_-_5661971_5662117	0.180664	PAX2.p2	AK191392|Urgcp|72046|upregulator of cell proliferation	AK129378|Urgcp|72046|upregulator of cell proliferation
mm9_v1_chr13_+_46597448_46597458	0.180408	PAX2.p2	BC057937|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr6_+_114081375_114081412	0.180221	PAX2.p2	AK053261|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	AK021402|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
mm9_v1_chr8_-_98377390_98377440	0.180117	PAX2.p2	AK052548|Slc38a7|234595|solute carrier family 38, member 7	NM_172758|Slc38a7|234595|solute carrier family 38, member 7	AK195271|Slc38a7|234595|solute carrier family 38, member 7	AK171137|Slc38a7|234595|solute carrier family 38, member 7
mm9_v1_chr5_-_31504605_31504675	0.179881	PAX2.p2	BC058976|Zfp513|101023|zinc finger protein 513	NM_175311|Zfp513|101023|zinc finger protein 513
mm9_v1_chr7_+_146574969_146575035	0.179091	PAX2.p2	BC056341|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	NM_001127363|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	NM_183144|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	AK083449|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	AK171360|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	AK171880|Inpp5a|212111|inositol polyphosphate-5-phosphatase A
mm9_v1_chr10_+_59569206_59569342	0.178782	PAX2.p2	AK122233|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm9_v1_chr13_-_115880163_115880420	0.177745	PAX2.p2	BC057160|Pelo|105083|pelota homolog (Drosophila)	BC050209|Pelo|105083|pelota homolog (Drosophila)	AK170635|Pelo|105083|pelota homolog (Drosophila)	NM_134058|Pelo|105083|pelota homolog (Drosophila)	AK146382|Pelo|105083|pelota homolog (Drosophila)	AK168228|Pelo|105083|pelota homolog (Drosophila)
mm9_v1_chr6_+_149357407_149357610	0.177434	PAX2.p2	AK162699|Bicd1|12121|bicaudal D homolog 1 (Drosophila)	NM_001112796|Bicd1|12121|bicaudal D homolog 1 (Drosophila)	NM_009753|Bicd1|12121|bicaudal D homolog 1 (Drosophila)	AK051379|Bicd1|12121|bicaudal D homolog 1 (Drosophila)	AK220497|Bicd1|12121|bicaudal D homolog 1 (Drosophila)	AK051718|Bicd1|12121|bicaudal D homolog 1 (Drosophila)	AK082523|Bicd1|12121|bicaudal D homolog 1 (Drosophila)	AK045975|Bicd1|12121|bicaudal D homolog 1 (Drosophila)	AK038585|Bicd1|12121|bicaudal D homolog 1 (Drosophila)	AK043650|Bicd1|12121|bicaudal D homolog 1 (Drosophila)
mm9_v1_chr11_-_60590669_60590737	0.177283	PAX2.p2	BC099689|Top3a|21975|topoisomerase (DNA) III alpha
mm9_v1_chr6_+_126889979_126890004	0.177109	PAX2.p2	AK037095|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK045541|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	NM_138594|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK043521|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK137201|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK042976|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK046707|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed
mm9_v1_chr16_-_85080242_85080258	0.176951	PAX2.p2	BC005490|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr15_+_65618577_65618631	0.176086	PAX2.p2	AK030074|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK039937|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	NM_133766|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK044475|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK052906|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK044000|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	BC032092|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK051060|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK161250|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AB158474|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	BC007482|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK052176|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK129065|Efr3a|76740|EFR3 homolog A (S. cerevisiae)	AK032461|Efr3a|76740|EFR3 homolog A (S. cerevisiae)
mm9_v1_chr2_+_135485242_135485446	0.176064	PAX2.p2	AK148001|Plcb4|18798|phospholipase C, beta 4	AK036896|Plcb4|18798|phospholipase C, beta 4	AK020944|Plcb4|18798|phospholipase C, beta 4	BC089521|Plcb4|18798|phospholipase C, beta 4
mm9_v1_chr14_-_52530382_52530466	0.176052	PAX2.p2	AK076514|Ndrg2|29811|N-myc downstream regulated gene 2	AK173136|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr6_-_24477665_24477717	0.175943	PAX2.p2	AK019324|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019301|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	NM_026614|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr10_-_53795556_53795601	0.175626	PAX2.p2	AK031038|Man1a|17155|mannosidase 1, alpha	NM_008548|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr18_-_61371010_61371141	0.175509	PAX2.p2	AK007212|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2	BC028345|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2	D42049|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2	AK163974|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2
mm9_v1_chrX_+_133371611_133371673	0.175451	PAX2.p2	AK199492|Plp1|18823|proteolipid protein (myelin) 1
mm9_v1_chr8_+_55162885_55163132	0.17542	PAX2.p2	NM_009506|Vegfc|22341|vascular endothelial growth factor C	AK047844|Vegfc|22341|vascular endothelial growth factor C	U73620|Vegfc|22341|vascular endothelial growth factor C	BC096377|Vegfc|22341|vascular endothelial growth factor C	U58112|Vegfc|22341|vascular endothelial growth factor C	EU862554|Vegfc|22341|vascular endothelial growth factor C	EU862555|Vegfc|22341|vascular endothelial growth factor C
mm9_v1_chr7_-_106289651_106289675	0.175415	PAX2.p2	NM_178635|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr3_+_13471681_13471721	0.175026	PAX2.p2	AK079659|Ralyl|76897|RALY RNA binding protein-like	AK032086|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr12_+_81745188_81745226	0.174707	PAX2.p2	NM_026244|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK090062|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK080462|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	BC072655|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK008025|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr8_-_75877365_75877401	0.173527	PAX2.p2	AK053707|Large|16795|like-glycosyltransferase
mm9_v1_chr4_-_141346551_141346594	0.173467	PAX2.p2	AK051048|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	NM_172338|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	AK028692|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	AK164023|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16	AK154946|Dnajc16|214063|DnaJ (Hsp40) homolog, subfamily C, member 16
mm9_v1_chr11_+_35582969_35582996	0.173062	PAX2.p2	AK039865|Pank3|211347|pantothenate kinase 3	NM_145962|Pank3|211347|pantothenate kinase 3
mm9_v1_chr11_+_54128404_54128494	0.172903	PAX2.p2	NM_001033599|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY786360|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY786362|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK032479|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK039380|Acsl6|216739|acyl-CoA synthetase long-chain family member 6
mm9_v1_chr6_+_7505070_7505199	0.172881	PAX2.p2	D17584|Tac1|21333|tachykinin 1	NM_009311|Tac1|21333|tachykinin 1	BC117081|Tac1|21333|tachykinin 1	BC119122|Tac1|21333|tachykinin 1	BC144737|Tac1|21333|tachykinin 1
mm9_v1_chr13_+_77274778_77274859	0.172867	PAX2.p2	NM_001081353|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	NM_001145676|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	AK165312|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	AK050886|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	AK008859|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	BC089469|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	BC151066|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	BC157949|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene	AK143619|2210408I21Rik|72371|RIKEN cDNA 2210408I21 gene
mm9_v1_chr2_+_35991917_35991917	0.172228	PAX2.p2	NM_026422|Mrrf|67871|mitochondrial ribosome recycling factor
mm9_v1_chr1_+_92895317_92895369	0.172159	PAX2.p2	AK041162|Lrrfip1|16978|leucine rich repeat (in FLII) interacting protein 1
mm9_v1_chr1_-_77511577_77511645	0.171751	PAX2.p2	BC004782|Epha4|13838|Eph receptor A4	BC052164|Epha4|13838|Eph receptor A4
mm9_v1_chr1_-_133421746_133421916	0.171329	PAX2.p2	BC158055|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	BC151081|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	BC151082|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	BC172152|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2
mm9_v1_chr2_+_174170886_174171016	0.171195	PAX2.p2	AK178212|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182236|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK182338|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK183674|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK186374|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr2_+_158436493_158436936	0.1708	PAX2.p2	AY578289|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	NM_009508|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	BC052020|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163754|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK140468|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163661|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AJ001598|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1
mm9_v1_chr9_+_82723787_82723813	0.170739	PAX2.p2	AJ242722|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr17_-_34092533_34092631	0.170547	PAX2.p2	BC081458|Rps18|20084|ribosomal protein S18	BC081459|Rps18|20084|ribosomal protein S18	BC091729|Rps18|20084|ribosomal protein S18	M76763|Rps18|20084|ribosomal protein S18	NM_011296|Rps18|20084|ribosomal protein S18	BC093500|Rps18|20084|ribosomal protein S18	AK050626|Rps18|20084|ribosomal protein S18	AK146354|Rps18|20084|ribosomal protein S18	AK151580|Rps18|20084|ribosomal protein S18	AK159437|Rps18|20084|ribosomal protein S18	AK159821|Rps18|20084|ribosomal protein S18	AK169246|Rps18|20084|ribosomal protein S18	BC100604|Rps18|20084|ribosomal protein S18
mm9_v1_chrX_+_20265590_20265887	0.170475	PAX2.p2	AK143518|Cdk16|18555|cyclin-dependent kinase 16	AK051425|Cdk16|18555|cyclin-dependent kinase 16	NM_011049|Cdk16|18555|cyclin-dependent kinase 16	AK211169|Cdk16|18555|cyclin-dependent kinase 16	BC011069|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr14_+_120724380_120724561	0.170256	PAX2.p2	BC020406|Mbnl2|105559|muscleblind-like 2	BC026711|Mbnl2|105559|muscleblind-like 2	GQ906534|Mbnl2|105559|muscleblind-like 2	AK216404|Mbnl2|105559|muscleblind-like 2
mm9_v1_chrX_+_7461369_7461465	0.169946	PAX2.p2	AF229634|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	NM_001083937|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	NM_078484|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	BC037701|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	AB027147|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	AK146830|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	AK155755|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2
mm9_v1_chrX_-_71032164_71032270	0.169585	PAX2.p2	AK193262|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	AJ748655|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	AK166925|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	AK167131|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	BC085179|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	BC119170|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	BC119172|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	AK156309|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	AK168526|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	NM_008323|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma	U68564|Idh3g|15929|isocitrate dehydrogenase 3 (NAD+), gamma
mm9_v1_chr4_+_62021760_62021858	0.169538	PAX2.p2	AK046835|Slc31a1|20529|solute carrier family 31, member 1	AK170285|Slc31a1|20529|solute carrier family 31, member 1	BC058227|Slc31a1|20529|solute carrier family 31, member 1	BC034674|Slc31a1|20529|solute carrier family 31, member 1	AK203972|Slc31a1|20529|solute carrier family 31, member 1
mm9_v1_chr18_-_24688558_24688626	0.169194	PAX2.p2	AK161533|Rprd1a|225283|regulation of nuclear pre-mRNA domain containing 1A	AK137068|Rprd1a|225283|regulation of nuclear pre-mRNA domain containing 1A
mm9_v1_chr15_-_93167308_93167408	0.16902	PAX2.p2	AK148634|Yaf2|67057|YY1 associated factor 2	AB100452|Yaf2|67057|YY1 associated factor 2	AB100453|Yaf2|67057|YY1 associated factor 2	AK005008|Yaf2|67057|YY1 associated factor 2	AK011702|Yaf2|67057|YY1 associated factor 2	NM_024189|Yaf2|67057|YY1 associated factor 2
mm9_v1_chr4_+_155266340_155266446	0.168669	PAX2.p2	BC098196|Acap3|140500|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3	BC025556|Acap3|140500|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
mm9_v1_chr16_+_11066390_11066492	0.16854	PAX2.p2	NM_009223|Snn|20621|stannin	BC006961|Snn|20621|stannin	AK149685|Snn|20621|stannin	BC063027|Snn|20621|stannin	BC017685|Snn|20621|stannin
mm9_v1_chrX_+_109714134_109714134	0.168068	PAX2.p2	AK038956|Zfp711|245595|zinc finger protein 711	NM_177747|Zfp711|245595|zinc finger protein 711
mm9_v1_chr2_+_156022382_156022502	0.166806	PAX2.p2	NM_172674|Phf20|228829|PHD finger protein 20	AK045309|Phf20|228829|PHD finger protein 20	AK033017|Phf20|228829|PHD finger protein 20	AK038573|Phf20|228829|PHD finger protein 20	AK142424|Phf20|228829|PHD finger protein 20	BC060121|Phf20|228829|PHD finger protein 20
mm9_v1_chr18_+_67624482_67624504	0.166385	PAX2.p2	NM_144867|Slmo1|225655|slowmo homolog 1 (Drosophila)
mm9_v1_chr1_-_36766756_36766838	0.165255	PAX2.p2	BC023020|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)	NM_146107|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)	AK078508|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)	AK088839|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
mm9_v1_chr12_+_112127468_112127521	0.16442	PAX2.p2	AK147592|Tecpr2|104859|tectonin beta-propeller repeat containing 2	NM_001081057|Tecpr2|104859|tectonin beta-propeller repeat containing 2	AK031736|Tecpr2|104859|tectonin beta-propeller repeat containing 2	AK129113|Tecpr2|104859|tectonin beta-propeller repeat containing 2
mm9_v1_chr13_-_46823191_46823231	0.164304	PAX2.p2	AK086847|Nup153|218210|nucleoporin 153	NM_175749|Nup153|218210|nucleoporin 153
mm9_v1_chr19_-_44144175_44144240	0.163493	PAX2.p2	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr13_+_3537514_3537611	0.162621	PAX2.p2	L36314|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr2_+_30219837_30219854	0.162214	PAX2.p2	BC051404|Fam73b|108958|family with sequence similarity 73, member B	NM_175392|Fam73b|108958|family with sequence similarity 73, member B
mm9_v1_chr17_+_27693821_27693843	0.162029	PAX2.p2	J04179|Hmga1|15361|high mobility group AT-hook 1
mm9_v1_chr17_+_28314083_28314176	0.161639	PAX2.p2	BC060611|Zfp523|224656|zinc finger protein 523
mm9_v1_chr11_-_109856977_109857129	0.161475	PAX2.p2	BC089557|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AK173034|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	BC141401|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AF498362|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AK138196|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	NM_013851|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b
mm9_v1_chrM_+_3913_4410	0.161297	PAX2.p2	
mm9_v1_chr1_-_171677653_171677778	0.161154	PAX2.p2	AB004315|Rgs4|19736|regulator of G-protein signaling 4	BC003882|Rgs4|19736|regulator of G-protein signaling 4	BC055293|Rgs4|19736|regulator of G-protein signaling 4	AK030536|Rgs4|19736|regulator of G-protein signaling 4	AK039134|Rgs4|19736|regulator of G-protein signaling 4	DQ346659|Rgs4|19736|regulator of G-protein signaling 4	DQ346660|Rgs4|19736|regulator of G-protein signaling 4	DQ346661|Rgs4|19736|regulator of G-protein signaling 4	NM_009062|Rgs4|19736|regulator of G-protein signaling 4
mm9_v1_chr5_-_131783352_131783418	0.160675	PAX2.p2	BC069177|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)	NM_145218|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)	BC158110|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)
mm9_v1_chr11_-_96777696_96777844	0.160472	PAX2.p2	AK153951|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK077853|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	BC002318|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	NM_030248|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK075791|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK165494|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK075771|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK050014|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK149765|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3	AK166476|Cdk5rap3|80280|CDK5 regulatory subunit associated protein 3
mm9_v1_chr3_+_138190223_138190257	0.160412	PAX2.p2	AK167097|Eif4e|13684|eukaryotic translation initiation factor 4E	M61731|Eif4e|13684|eukaryotic translation initiation factor 4E	AK082867|Eif4e|13684|eukaryotic translation initiation factor 4E	AK146757|Eif4e|13684|eukaryotic translation initiation factor 4E	BC010759|Eif4e|13684|eukaryotic translation initiation factor 4E	BC085087|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr15_+_81494368_81494374	0.160322	PAX2.p2	AK029115|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr5_+_58109278_58109341	0.15961	PAX2.p2	AK140356|Pcdh7|54216|protocadherin 7	AB006758|Pcdh7|54216|protocadherin 7
mm9_v1_chr12_+_62625477_62625618	0.159277	PAX2.p2	AK048443|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5	AK034245|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5	NM_178714|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5
mm9_v1_chr12_+_112812677_112812709	0.159107	PAX2.p2	AK049500|Mark3|17169|MAP/microtubule affinity-regulating kinase 3
mm9_v1_chr2_-_121239527_121239527	0.158861	PAX2.p2	NM_153075|Catsper2|212670|cation channel, sperm associated 2
mm9_v1_chr9_-_104165221_104165274	0.158678	PAX2.p2	AK165345|Dnajc13|235567|DnaJ (Hsp40) homolog, subfamily C, member 13	NM_001163026|Dnajc13|235567|DnaJ (Hsp40) homolog, subfamily C, member 13	AK083408|Dnajc13|235567|DnaJ (Hsp40) homolog, subfamily C, member 13	AK147911|Dnajc13|235567|DnaJ (Hsp40) homolog, subfamily C, member 13
mm9_v1_chr7_+_28964486_28964515	0.158145	PAX2.p2	BC019545|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_001037957|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_010092|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	Y18280|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr17_+_21082397_21082419	0.157931	PAX2.p2	BC006606|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform	NM_016891|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
mm9_v1_chr11_+_78136690_78136700	0.157649	PAX2.p2	BC004802|Aldoc|11676|aldolase C, fructose-bisphosphate	BC008184|Aldoc|11676|aldolase C, fructose-bisphosphate
mm9_v1_chr16_+_20733199_20733225	0.157636	PAX2.p2	AF069501|Chrd|12667|chordin	NM_009893|Chrd|12667|chordin	BC145017|Chrd|12667|chordin	BC145018|Chrd|12667|chordin	BC145019|Chrd|12667|chordin	BC145696|Chrd|12667|chordin	AK077460|Chrd|12667|chordin	AK165339|Chrd|12667|chordin	AF096276|Chrd|12667|chordin	AK149445|Chrd|12667|chordin
mm9_v1_chr15_+_58247107_58247243	0.157379	PAX2.p2	AK122297|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	DQ228142|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed
mm9_v1_chr11_-_3995299_3995466	0.156824	PAX2.p2	AK167990|Mtfp1|67900|mitochondrial fission process 1	AK006148|Mtfp1|67900|mitochondrial fission process 1	BC058737|Mtfp1|67900|mitochondrial fission process 1	AK010971|Mtfp1|67900|mitochondrial fission process 1	AK012058|Mtfp1|67900|mitochondrial fission process 1	AK078381|Mtfp1|67900|mitochondrial fission process 1	NM_026443|Mtfp1|67900|mitochondrial fission process 1
mm9_v1_chr18_-_35862744_35862797	0.15583	PAX2.p2	AK012521|Dnajc18|76594|DnaJ (Hsp40) homolog, subfamily C, member 18	BC026452|Dnajc18|76594|DnaJ (Hsp40) homolog, subfamily C, member 18	AK030483|Dnajc18|76594|DnaJ (Hsp40) homolog, subfamily C, member 18	NM_029669|Dnajc18|76594|DnaJ (Hsp40) homolog, subfamily C, member 18
mm9_v1_chr9_+_120036883_120036892	0.155755	PAX2.p2	NM_011029|Rpsa|16785|ribosomal protein SA
mm9_v1_chr19_+_10599708_10599823	0.155523	PAX2.p2	NM_001164272|Cpsf7|269061|cleavage and polyadenylation specific factor 7	NM_172302|Cpsf7|269061|cleavage and polyadenylation specific factor 7	AK044306|Cpsf7|269061|cleavage and polyadenylation specific factor 7	AK053375|Cpsf7|269061|cleavage and polyadenylation specific factor 7	AK088603|Cpsf7|269061|cleavage and polyadenylation specific factor 7	AK165330|Cpsf7|269061|cleavage and polyadenylation specific factor 7
mm9_v1_chr4_+_132091510_132091524	0.154767	PAX2.p2	BC035539|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8
mm9_v1_chr11_+_110858832_110858871	0.154351	PAX2.p2	AK032192|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	AK140249|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	AK045447|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16
mm9_v1_chr8_-_23587282_23587355	0.15435	PAX2.p2	BC048089|AI316807|102032|expressed sequence AI316807	NM_001012667|AI316807|102032|expressed sequence AI316807	NM_001146117|AI316807|102032|expressed sequence AI316807	AK133712|AI316807|102032|expressed sequence AI316807
mm9_v1_chr4_+_43394949_43394962	0.154213	PAX2.p2	AK166260|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr9_-_116084294_116084382	0.154029	PAX2.p2	BC052629|Tgfbr2|21813|transforming growth factor, beta receptor II
mm9_v1_chr10_+_74429876_74429984	0.153812	PAX2.p2	NM_010311|Gnaz|14687|guanine nucleotide binding protein, alpha z subunit	AK080716|Gnaz|14687|guanine nucleotide binding protein, alpha z subunit
mm9_v1_chr17_-_51318632_51318637	0.153746	PAX2.p2	AK154975|Tbc1d5|72238|TBC1 domain family, member 5
mm9_v1_chr8_-_74150754_74150876	0.153563	PAX2.p2	AK141620|Unc13a|382018|unc-13 homolog A (C. elegans)	AK048697|Unc13a|382018|unc-13 homolog A (C. elegans)	AK039579|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chr15_+_81297235_81297246	0.153167	PAX2.p2	AK149259|Rbx1|56438|ring-box 1
mm9_v1_chr18_-_62901040_62901040	0.152496	PAX2.p2	AK139149|Spink13|100038417|serine peptidase inhibitor, Kazal type 13	NM_001168423|Spink13|100038417|serine peptidase inhibitor, Kazal type 13
mm9_v1_chr10_+_57206509_57206656	0.152303	PAX2.p2	
mm9_v1_chr17_-_27075896_27076239	0.15176	PAX2.p2	AK181681|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK187338|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC037500|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC021463|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)
mm9_v1_chr6_-_82602836_82602872	0.151436	PAX2.p2	BC023189|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK167631|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK010135|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK010300|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	NM_025882|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK145365|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK011595|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)	AK160582|Pole4|66979|polymerase (DNA-directed), epsilon 4 (p12 subunit)
mm9_v1_chr13_+_55050729_55050861	0.151407	PAX2.p2	BC058084|Unc5a|107448|unc-5 homolog A (C. elegans)	AJ487852|Unc5a|107448|unc-5 homolog A (C. elegans)	NM_153131|Unc5a|107448|unc-5 homolog A (C. elegans)
mm9_v1_chr1_+_59030365_59030647	0.151249	PAX2.p2	AK140272|Stradb|227154|STE20-related kinase adaptor beta	NM_172656|Stradb|227154|STE20-related kinase adaptor beta	AK036678|Stradb|227154|STE20-related kinase adaptor beta	BC055814|Stradb|227154|STE20-related kinase adaptor beta	AK046790|Stradb|227154|STE20-related kinase adaptor beta	AK080096|Stradb|227154|STE20-related kinase adaptor beta	AK035207|Stradb|227154|STE20-related kinase adaptor beta	AK086974|Stradb|227154|STE20-related kinase adaptor beta	BC037003|Stradb|227154|STE20-related kinase adaptor beta	BC060956|Stradb|227154|STE20-related kinase adaptor beta	AK146079|Stradb|227154|STE20-related kinase adaptor beta	AB057666|Stradb|227154|STE20-related kinase adaptor beta	AB057667|Stradb|227154|STE20-related kinase adaptor beta
mm9_v1_chr19_+_21727795_21727859	0.151025	PAX2.p2	NM_146096|Fam108b|226016|family with sequence similarity 108, member B	AK017641|Fam108b|226016|family with sequence similarity 108, member B
mm9_v1_chr19_+_42007957_42008102	0.151001	PAX2.p2	NM_023740|Zdhhc16|74168|zinc finger, DHHC domain containing 16	AK151505|Zdhhc16|74168|zinc finger, DHHC domain containing 16	AK168042|Zdhhc16|74168|zinc finger, DHHC domain containing 16	BC010835|Zdhhc16|74168|zinc finger, DHHC domain containing 16	AF176814|Zdhhc16|74168|zinc finger, DHHC domain containing 16	AK183781|Zdhhc16|74168|zinc finger, DHHC domain containing 16
mm9_v1_chr18_-_5334425_5334436	0.150522	PAX2.p2	AK020518|Zfp438|240186|zinc finger protein 438	AK046812|Zfp438|240186|zinc finger protein 438	AK034745|Zfp438|240186|zinc finger protein 438	BC096460|Zfp438|240186|zinc finger protein 438	NM_178722|Zfp438|240186|zinc finger protein 438
mm9_v1_chr3_-_146433544_146433656	0.150462	PAX2.p2	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr7_-_16531363_16531456	0.150275	PAX2.p2	BC025810|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AY535001|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK077341|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK160070|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK088461|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK151836|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK169290|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK146916|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	NM_133831|Gltscr2|68077|glioma tumor suppressor candidate region gene 2
mm9_v1_chr7_-_50788445_50788507	0.150173	PAX2.p2	AK089205|Cd33|12489|CD33 antigen	AK155745|Cd33|12489|CD33 antigen	S71345|Cd33|12489|CD33 antigen	S71403|Cd33|12489|CD33 antigen	AK170937|Cd33|12489|CD33 antigen
mm9_v1_chr11_+_117643610_117643698	0.150132	PAX2.p2	NM_001195089|Tmc8|217356|transmembrane channel-like gene family 8	NM_001195090|Tmc8|217356|transmembrane channel-like gene family 8	NM_181856|Tmc8|217356|transmembrane channel-like gene family 8	AK171772|Tmc8|217356|transmembrane channel-like gene family 8	AK156764|Tmc8|217356|transmembrane channel-like gene family 8	AY236501|Tmc8|217356|transmembrane channel-like gene family 8
mm9_v1_chr2_+_4840097_4840130	0.149806	PAX2.p2	AK165412|Phyh|16922|phytanoyl-CoA hydroxylase	AK169213|Phyh|16922|phytanoyl-CoA hydroxylase
mm9_v1_chr14_+_64225366_64225366	0.149277	PAX2.p2	NM_173393|Xkr6|219149|X Kell blood group precursor related family member 6 homolog
mm9_v1_chr9_+_72859850_72859978	0.148802	PAX2.p2	BC006717|Ccpg1|72278|cell cycle progression 1
mm9_v1_chr17_-_35183667_35183733	0.148766	PAX2.p2	NM_001146215|Msh5|17687|mutS homolog 5 (E. coli)	AF107352|Msh5|17687|mutS homolog 5 (E. coli)	AK042083|Msh5|17687|mutS homolog 5 (E. coli)
mm9_v1_chr11_-_45768992_45769003	0.148684	PAX2.p2	BC115560|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC115561|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK010876|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	NM_001080969|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm9_v1_chr2_+_28555680_28555693	0.148392	PAX2.p2	NM_001033874|Ak8|68870|adenylate kinase 8	AK004439|Ak8|68870|adenylate kinase 8	BC100481|Ak8|68870|adenylate kinase 8	BC109352|Ak8|68870|adenylate kinase 8
mm9_v1_chr9_+_110379461_110379473	0.148295	PAX2.p2	NM_010628|Kif9|16578|kinesin family member 9
mm9_v1_chr6_+_134780207_134780442	0.147099	PAX2.p2	AK045467|Crebl2|232430|cAMP responsive element binding protein-like 2	NM_177687|Crebl2|232430|cAMP responsive element binding protein-like 2	BC109358|Crebl2|232430|cAMP responsive element binding protein-like 2	BC109359|Crebl2|232430|cAMP responsive element binding protein-like 2	AK195782|Crebl2|232430|cAMP responsive element binding protein-like 2
mm9_v1_chr8_-_74195545_74195647	0.147003	PAX2.p2	AY753536|Unc13a|382018|unc-13 homolog A (C. elegans)	AK010728|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chr3_+_60305108_60305212	0.146552	PAX2.p2	AK162039|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK149405|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AB093240|Mbnl1|56758|muscleblind-like 1 (Drosophila)	NM_020007|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK088871|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK153848|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC060031|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC096600|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr11_-_87800799_87801034	0.145971	PAX2.p2	AK028319|Dynll2|68097|dynein light chain LC8-type 2	BC011289|Dynll2|68097|dynein light chain LC8-type 2	BC058797|Dynll2|68097|dynein light chain LC8-type 2	BC040822|Dynll2|68097|dynein light chain LC8-type 2	AK011284|Dynll2|68097|dynein light chain LC8-type 2	AK160114|Dynll2|68097|dynein light chain LC8-type 2	AK049645|Dynll2|68097|dynein light chain LC8-type 2	AK078434|Dynll2|68097|dynein light chain LC8-type 2	AK169212|Dynll2|68097|dynein light chain LC8-type 2	NM_026556|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr8_-_87370795_87370829	0.145959	PAX2.p2	NM_007591|Calr|12317|calreticulin
mm9_v1_chr4_+_135841981_135841996	0.145857	PAX2.p2	AK053652|Zfp46|22704|zinc finger protein 46	NM_009557|Zfp46|22704|zinc finger protein 46	AK173240|Zfp46|22704|zinc finger protein 46
mm9_v1_chr18_+_60685866_60685974	0.145663	PAX2.p2	AK162552|Dctn4|67665|dynactin 4	AK168484|Dctn4|67665|dynactin 4	AK160813|Dctn4|67665|dynactin 4	AK050896|Dctn4|67665|dynactin 4	AK019382|Dctn4|67665|dynactin 4	BC034725|Dctn4|67665|dynactin 4	NM_026302|Dctn4|67665|dynactin 4	AK141855|Dctn4|67665|dynactin 4	AK003238|Dctn4|67665|dynactin 4	AK089264|Dctn4|67665|dynactin 4	BC006677|Dctn4|67665|dynactin 4	AK177969|Dctn4|67665|dynactin 4	AK197489|Dctn4|67665|dynactin 4
mm9_v1_chrX_+_68303282_68303430	0.145638	PAX2.p2	AK090190|Mamld1|333639|mastermind-like domain containing 1	NM_001081354|Mamld1|333639|mastermind-like domain containing 1
mm9_v1_chr13_+_73741384_73741748	0.145538	PAX2.p2	AK032295|Clptm1l|218335|CLPTM1-like	AK048357|Clptm1l|218335|CLPTM1-like	AK156203|Clptm1l|218335|CLPTM1-like	AK165939|Clptm1l|218335|CLPTM1-like	BC026562|Clptm1l|218335|CLPTM1-like	NM_146047|Clptm1l|218335|CLPTM1-like
mm9_v1_chr6_-_56312170_56312512	0.144847	PAX2.p2	AK082497|Pde1c|18575|phosphodiesterase 1C	BC032277|Pde1c|18575|phosphodiesterase 1C	AK139923|Pde1c|18575|phosphodiesterase 1C	AK017183|Pde1c|18575|phosphodiesterase 1C	AK082180|Pde1c|18575|phosphodiesterase 1C	AK030423|Pde1c|18575|phosphodiesterase 1C	NM_001025568|Pde1c|18575|phosphodiesterase 1C	NM_001159952|Pde1c|18575|phosphodiesterase 1C	NM_001159953|Pde1c|18575|phosphodiesterase 1C	L76946|Pde1c|18575|phosphodiesterase 1C	NM_011054|Pde1c|18575|phosphodiesterase 1C
mm9_v1_chr4_-_149112082_149112163	0.144702	PAX2.p2	AK079157|Tmem201|230917|transmembrane protein 201	AK078532|Tmem201|230917|transmembrane protein 201	AK039221|Tmem201|230917|transmembrane protein 201	BC072645|Tmem201|230917|transmembrane protein 201	NM_001025106|Tmem201|230917|transmembrane protein 201	NM_177672|Tmem201|230917|transmembrane protein 201	AK086543|Tmem201|230917|transmembrane protein 201	AK153631|Tmem201|230917|transmembrane protein 201
mm9_v1_chr11_+_59652991_59653017	0.144208	PAX2.p2	AK008226|Nt5m|103850|5',3'-nucleotidase, mitochondrial
mm9_v1_chr19_+_10059060_10059150	0.142735	PAX2.p2	AK180886|Fth1|14319|ferritin heavy chain 1
mm9_v1_chr17_+_34272535_34272615	0.142604	PAX2.p2	AK160460|H2-DMa|14998|histocompatibility 2, class II, locus DMa	BC001996|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X62742|H2-DMa|14998|histocompatibility 2, class II, locus DMa	AK169900|H2-DMa|14998|histocompatibility 2, class II, locus DMa	BC049992|H2-DMa|14998|histocompatibility 2, class II, locus DMa	NM_010386|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35324|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35325|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35326|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35327|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35328|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90783|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90784|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90785|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90786|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90787|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90788|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90789|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90790|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90791|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90792|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90793|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90794|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90795|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90963|H2-DMa|14998|histocompatibility 2, class II, locus DMa
mm9_v1_chr14_+_32898996_32899135	0.142462	PAX2.p2	AK032160|Oxnad1|218885|oxidoreductase NAD-binding domain containing 1	AK028649|Oxnad1|218885|oxidoreductase NAD-binding domain containing 1	BC019806|Oxnad1|218885|oxidoreductase NAD-binding domain containing 1
mm9_v1_chr10_+_41239248_41239438	0.142251	PAX2.p2	AK145131|Cd164|53599|CD164 antigen	AK169275|Cd164|53599|CD164 antigen	AB028895|Cd164|53599|CD164 antigen	NM_016898|Cd164|53599|CD164 antigen	AK018009|Cd164|53599|CD164 antigen	BC005414|Cd164|53599|CD164 antigen	AB014464|Cd164|53599|CD164 antigen	AF299345|Cd164|53599|CD164 antigen	AK194033|Cd164|53599|CD164 antigen
mm9_v1_chr10_+_82448214_82448242	0.142205	PAX2.p2	NM_021439|Chst11|58250|carbohydrate sulfotransferase 11	AJ289133|Chst11|58250|carbohydrate sulfotransferase 11
mm9_v1_chr17_+_12312128_12312218	0.141727	PAX2.p2	AK005139|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	NM_026644|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	AK166917|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	BC047281|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm9_v1_chr2_+_155207542_155207579	0.141259	PAX2.p2	AK170132|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr11_+_60166826_60166909	0.141152	PAX2.p2	AK047468|Lrrc48|74665|leucine rich repeat containing 48	AK049695|Lrrc48|74665|leucine rich repeat containing 48	BC018412|Lrrc48|74665|leucine rich repeat containing 48	AK015430|Lrrc48|74665|leucine rich repeat containing 48	NM_029044|Lrrc48|74665|leucine rich repeat containing 48
mm9_v1_chr17_-_66121883_66122091	0.141097	PAX2.p2	AB232617|Rab31|106572|RAB31, member RAS oncogene family	AK159095|Rab31|106572|RAB31, member RAS oncogene family	AK166151|Rab31|106572|RAB31, member RAS oncogene family	AK051270|Rab31|106572|RAB31, member RAS oncogene family	BC013063|Rab31|106572|RAB31, member RAS oncogene family	AK156677|Rab31|106572|RAB31, member RAS oncogene family	NM_133685|Rab31|106572|RAB31, member RAS oncogene family
mm9_v1_chr2_+_31951030_31951062	0.141085	PAX2.p2	AK134638|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3
mm9_v1_chr9_+_20447321_20447371	0.140876	PAX2.p2	AK154036|Ubl5|66177|ubiquitin-like 5
mm9_v1_chr4_+_102243272_102243317	0.140309	PAX2.p2	AK011999|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC007155|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr19_-_3912727_3912762	0.140201	PAX2.p2	BC086766|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	AK149674|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	BC021616|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	AK153900|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	AK164901|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	AK167907|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8
mm9_v1_chr12_+_45370145_45370261	0.139868	PAX2.p2	AK004621|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK163211|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK029616|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK168475|Pnpla8|67452|patatin-like phospholipase domain containing 8	AK145776|Pnpla8|67452|patatin-like phospholipase domain containing 8	AB044139|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr10_+_92916131_92916143	0.139826	PAX2.p2	AK005161|Lta4h|16993|leukotriene A4 hydrolase	NM_008517|Lta4h|16993|leukotriene A4 hydrolase
mm9_v1_chr11_+_86497484_86497540	0.139289	PAX2.p2	NM_175004|Ptrh2|217057|peptidyl-tRNA hydrolase 2	AK028555|Ptrh2|217057|peptidyl-tRNA hydrolase 2	AK038888|Ptrh2|217057|peptidyl-tRNA hydrolase 2
mm9_v1_chr7_+_116154330_116154341	0.139189	PAX2.p2	AK147700|Tub|22141|tubby candidate gene
mm9_v1_chr7_-_31935974_31936116	0.139174	PAX2.p2	AK150032|Gramd1a|52857|GRAM domain containing 1A	AK150196|Gramd1a|52857|GRAM domain containing 1A	AK150837|Gramd1a|52857|GRAM domain containing 1A	AK151987|Gramd1a|52857|GRAM domain containing 1A	AK152294|Gramd1a|52857|GRAM domain containing 1A	AK083837|Gramd1a|52857|GRAM domain containing 1A	AK004885|Gramd1a|52857|GRAM domain containing 1A	AK154821|Gramd1a|52857|GRAM domain containing 1A	NM_027898|Gramd1a|52857|GRAM domain containing 1A
mm9_v1_chr7_+_53039094_53039107	0.139093	PAX2.p2	BC059845|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr7_+_108526635_108526703	0.138311	PAX2.p2	NM_001040112|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	AK150132|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm9_v1_chr8_+_47060860_47060925	0.137248	PAX2.p2	AK078309|Ufsp2|192169|UFM1-specific peptidase 2	AK075795|Ufsp2|192169|UFM1-specific peptidase 2	AK160164|Ufsp2|192169|UFM1-specific peptidase 2	BC005503|Ufsp2|192169|UFM1-specific peptidase 2	NM_138668|Ufsp2|192169|UFM1-specific peptidase 2
mm9_v1_chr9_+_106091656_106091698	0.13723	PAX2.p2	BC054453|Wdr82|77305|WD repeat domain containing 82	BC112907|Wdr82|77305|WD repeat domain containing 82	BC044669|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr3_-_19935292_19935325	0.136912	PAX2.p2	AK157953|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK149359|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK166194|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK155497|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK171997|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK086167|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AF393747|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK079896|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AF393780|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK049204|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	NM_001146323|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	NM_001146324|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	NM_080634|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK036663|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)
mm9_v1_chr7_-_29526759_29526858	0.136892	PAX2.p2	Y11682|Mrps12|24030|mitochondrial ribosomal protein S12	NM_011885|Mrps12|24030|mitochondrial ribosomal protein S12	BC027522|Mrps12|24030|mitochondrial ribosomal protein S12	AK146730|Mrps12|24030|mitochondrial ribosomal protein S12
mm9_v1_chr10_-_18735154_18735215	0.13659	PAX2.p2	AK153238|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK088297|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK151921|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC050259|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC054806|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC060221|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	NM_009397|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3
mm9_v1_chrX_-_20194364_20194382	0.136346	PAX2.p2	BC096047|Ndufb11|104130|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11	Y08702|Ndufb11|104130|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11
mm9_v1_chr5_+_73684032_73684065	0.135969	PAX2.p2	AK078102|Ociad1|68095|OCIA domain containing 1	NM_001159887|Ociad1|68095|OCIA domain containing 1	NM_001159888|Ociad1|68095|OCIA domain containing 1	NM_001159889|Ociad1|68095|OCIA domain containing 1	NM_023429|Ociad1|68095|OCIA domain containing 1	AK145907|Ociad1|68095|OCIA domain containing 1	AK082769|Ociad1|68095|OCIA domain containing 1	AK006013|Ociad1|68095|OCIA domain containing 1	AK080795|Ociad1|68095|OCIA domain containing 1	AK159811|Ociad1|68095|OCIA domain containing 1	AK169715|Ociad1|68095|OCIA domain containing 1	AK007636|Ociad1|68095|OCIA domain containing 1	AK043603|Ociad1|68095|OCIA domain containing 1	AK077904|Ociad1|68095|OCIA domain containing 1
mm9_v1_chrX_+_71032398_71032403	0.135749	PAX2.p2	X90582|Ssr4|20832|signal sequence receptor, delta
mm9_v1_chr3_+_105255247_105255337	0.135538	PAX2.p2	NM_001039347|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AK147574|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr10_+_79605038_79605210	0.135014	PAX2.p2	NM_025313|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	AK155285|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	AK002330|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	AK165932|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	AK005082|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	AK018011|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	AK151151|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	AK076064|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	AK011374|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	BC008273|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	CT010177|Atp5d|66043|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
mm9_v1_chrX_-_7651692_7651751	0.134866	PAX2.p2	AK169389|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK088405|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AF193861|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AF019969|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK132238|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	BC023860|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)
mm9_v1_chr17_-_65962822_65962911	0.133479	PAX2.p2	AF157497|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK003576|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK159582|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK168824|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK088132|Vapa|30960|vesicle-associated membrane protein, associated protein A	BC003866|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK167381|Vapa|30960|vesicle-associated membrane protein, associated protein A	NM_013933|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr4_+_154998977_154998977	0.133126	PAX2.p2	AK077668|Cdk11b|12537|cyclin-dependent kinase 11B	NM_007661|Cdk11b|12537|cyclin-dependent kinase 11B
mm9_v1_chr7_-_31839825_31839873	0.132474	PAX2.p2	BC024671|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_052991|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_194321|Fxyd1|56188|FXYD domain-containing ion transport regulator 1
mm9_v1_chr9_+_59387632_59387710	0.132436	PAX2.p2	
mm9_v1_chr6_+_63206819_63206850	0.132177	PAX2.p2	AK036192|Grid2|14804|glutamate receptor, ionotropic, delta 2	BC139823|Grid2|14804|glutamate receptor, ionotropic, delta 2	D13266|Grid2|14804|glutamate receptor, ionotropic, delta 2	NM_008167|Grid2|14804|glutamate receptor, ionotropic, delta 2
mm9_v1_chr11_+_116715041_116715362	0.132105	PAX2.p2	BC100547|Mfsd11|69900|major facilitator superfamily domain containing 11	AK007898|Mfsd11|69900|major facilitator superfamily domain containing 11	AK032043|Mfsd11|69900|major facilitator superfamily domain containing 11	AK031384|Mfsd11|69900|major facilitator superfamily domain containing 11	BC079583|Mfsd11|69900|major facilitator superfamily domain containing 11	BC088988|Mfsd11|69900|major facilitator superfamily domain containing 11	NM_178620|Mfsd11|69900|major facilitator superfamily domain containing 11	BC145068|Mfsd11|69900|major facilitator superfamily domain containing 11	BC137971|Mfsd11|69900|major facilitator superfamily domain containing 11	BC137970|Mfsd11|69900|major facilitator superfamily domain containing 11	BC016209|Mfsd11|69900|major facilitator superfamily domain containing 11	AF015191|Mfsd11|69900|major facilitator superfamily domain containing 11
mm9_v1_chr2_+_119568028_119568087	0.131698	PAX2.p2	BC027291|Itpka|228550|inositol 1,4,5-trisphosphate 3-kinase A	NM_146125|Itpka|228550|inositol 1,4,5-trisphosphate 3-kinase A
mm9_v1_chr10_-_62113897_62113922	0.131649	PAX2.p2	BC075714|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	BC071265|Ddx50|94213|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
mm9_v1_chr11_-_72609515_72609577	0.131583	PAX2.p2	AK138991|Cyb5d2|192986|cytochrome b5 domain containing 2	AK034043|Cyb5d2|192986|cytochrome b5 domain containing 2	AK080730|Cyb5d2|192986|cytochrome b5 domain containing 2
mm9_v1_chr8_-_109580588_109580636	0.131335	PAX2.p2	AK145515|Cog8|97484|component of oligomeric golgi complex 8	NM_139229|Cog8|97484|component of oligomeric golgi complex 8
mm9_v1_chr17_+_36053855_36053941	0.131229	PAX2.p2	NM_175934|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK004266|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK011552|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK079389|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK031654|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK053183|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK079918|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	BC030903|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10
mm9_v1_chr4_+_129013245_129013310	0.131067	PAX2.p2	BC094629|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	AK132279|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	BC046825|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	AK008007|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	BC125606|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	BC125608|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	NM_025970|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	AK007377|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	AY071852|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	BC026442|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand	BC037657|Zbtb8os|67106|zinc finger and BTB domain containing 8 opposite strand
mm9_v1_chr8_-_88079141_88079168	0.131039	PAX2.p2	AB028853|Dnaja2|56445|DnaJ (Hsp40) homolog, subfamily A, member 2	AK163255|Dnaja2|56445|DnaJ (Hsp40) homolog, subfamily A, member 2
mm9_v1_chr17_+_34092753_34092872	0.130962	PAX2.p2	AK051732|Vps52|224705|vacuolar protein sorting 52 (yeast)	AK052523|Vps52|224705|vacuolar protein sorting 52 (yeast)	NM_172620|Vps52|224705|vacuolar protein sorting 52 (yeast)	BC063329|Vps52|224705|vacuolar protein sorting 52 (yeast)	AK042520|Vps52|224705|vacuolar protein sorting 52 (yeast)
mm9_v1_chr1_-_178205404_178205442	0.130639	PAX2.p2	AK043287|Pld5|319455|phospholipase D family, member 5	AK046294|Pld5|319455|phospholipase D family, member 5	AK144116|Pld5|319455|phospholipase D family, member 5	AK136851|Pld5|319455|phospholipase D family, member 5	AK136888|Pld5|319455|phospholipase D family, member 5	NM_176916|Pld5|319455|phospholipase D family, member 5
mm9_v1_chr9_+_123428782_123429096	0.13034	PAX2.p2	AK212865|Limd1|29806|LIM domains containing 1	AK218834|Limd1|29806|LIM domains containing 1	AK213065|Limd1|29806|LIM domains containing 1	AK214169|Limd1|29806|LIM domains containing 1	AK211030|Limd1|29806|LIM domains containing 1
mm9_v1_chr7_+_3655919_3655955	0.13013	PAX2.p2	BC012491|Rps9|76846|ribosomal protein S9
mm9_v1_chr12_+_45429857_45429887	0.129853	PAX2.p2	AK043838|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_001146031|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_176930|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr15_-_79158357_79158407	0.129852	PAX2.p2	BC057209|Pla2g6|53357|phospholipase A2, group VI	AK183678|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr8_-_87549120_87549191	0.129839	PAX2.p2	BC016453|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	BC083335|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AF039405|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	NM_019652|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK007827|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK171690|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)
mm9_v1_chr17_+_71553920_71554003	0.129575	PAX2.p2	AK165218|Lpin2|64898|lipin 2	AK050018|Lpin2|64898|lipin 2	NM_001164885|Lpin2|64898|lipin 2
mm9_v1_chr7_-_117987867_117987920	0.129342	PAX2.p2	BC096563|Rnf141|67150|ring finger protein 141	AK011839|Rnf141|67150|ring finger protein 141	BC018553|Rnf141|67150|ring finger protein 141	AK015505|Rnf141|67150|ring finger protein 141	NM_025999|Rnf141|67150|ring finger protein 141	AF353167|Rnf141|67150|ring finger protein 141	AK154417|Rnf141|67150|ring finger protein 141
mm9_v1_chr16_+_20535519_20535657	0.129106	PAX2.p2	AK146517|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK168414|Ap2m1|11773|adaptor protein complex AP-2, mu1	NM_009679|Ap2m1|11773|adaptor protein complex AP-2, mu1	U27106|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK159534|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC056352|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK150358|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC089342|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC094510|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK143586|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK141862|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK172889|Ap2m1|11773|adaptor protein complex AP-2, mu1
mm9_v1_chr4_-_154719714_154719796	0.128916	PAX2.p2	AK147300|Prkcz|18762|protein kinase C, zeta
mm9_v1_chr18_-_61336629_61336741	0.128517	PAX2.p2	BC079580|Hmgxb3|106894|HMG box domain containing 3	AK088852|Hmgxb3|106894|HMG box domain containing 3	AK034086|Hmgxb3|106894|HMG box domain containing 3	AK041866|Hmgxb3|106894|HMG box domain containing 3	AK144993|Hmgxb3|106894|HMG box domain containing 3	NM_178277|Hmgxb3|106894|HMG box domain containing 3	AB045322|Hmgxb3|106894|HMG box domain containing 3	NM_134134|Hmgxb3|106894|HMG box domain containing 3
mm9_v1_chr8_+_107951514_107951547	0.128394	PAX2.p2	AK133042|Lrrc36|270091|leucine rich repeat containing 36	NM_001033371|Lrrc36|270091|leucine rich repeat containing 36	NM_001170789|Lrrc36|270091|leucine rich repeat containing 36	BC150957|Lrrc36|270091|leucine rich repeat containing 36	BC172120|Lrrc36|270091|leucine rich repeat containing 36
mm9_v1_chr11_+_74644411_74644428	0.128235	PAX2.p2	NM_010813|Mnt|17428|max binding protein	U77356|Mnt|17428|max binding protein
mm9_v1_chr10_+_40069113_40069226	0.127945	PAX2.p2	AK122421|Cdk19|78334|cyclin-dependent kinase 19	NM_001168304|Cdk19|78334|cyclin-dependent kinase 19	NM_198164|Cdk19|78334|cyclin-dependent kinase 19	AK053651|Cdk19|78334|cyclin-dependent kinase 19	BC137614|Cdk19|78334|cyclin-dependent kinase 19	BC144782|Cdk19|78334|cyclin-dependent kinase 19	BC080280|Cdk19|78334|cyclin-dependent kinase 19
mm9_v1_chr3_-_116671869_116671896	0.127595	PAX2.p2	NM_023245|Palmd|114301|palmdelphin
mm9_v1_chr6_+_116288073_116288073	0.126901	PAX2.p2	AK165647|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr5_-_143667004_143667334	0.126495	PAX2.p2	AK218610|Actb|11461|actin, beta	AK206771|Actb|11461|actin, beta	AK208252|Actb|11461|actin, beta	AK202772|Actb|11461|actin, beta	M12481|Actb|11461|actin, beta	X03765|Actb|11461|actin, beta	EF095208|Actb|11461|actin, beta
mm9_v1_chr4_+_135842056_135842075	0.126319	PAX2.p2	AK136405|Zfp46|22704|zinc finger protein 46
mm9_v1_chr4_-_88956849_88956949	0.12589	PAX2.p2	AF059567|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	BC002010|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	AK146668|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	NM_007670|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	AK144132|Cdkn2b|12579|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
mm9_v1_chr1_+_154613622_154613679	0.125327	PAX2.p2	NM_026369|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr2_+_179777418_179777493	0.125074	PAX2.p2	AK173004|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK054560|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK038669|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr2_-_90910332_90910406	0.124815	PAX2.p2	BC125525|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	BC137752|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	AK035296|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	NM_026721|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	BC020106|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	AK156951|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13
mm9_v1_chr8_+_86590718_86590827	0.124586	PAX2.p2	AK147790|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	AK036208|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	AK044607|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	NM_009055|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	BC057018|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	AK083571|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	X76088|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)
mm9_v1_chr16_-_13903174_13903239	0.124528	PAX2.p2	AK054329|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	AK170661|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	NM_001039533|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1	NM_053181|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1
mm9_v1_chrX_-_130811415_130811532	0.124167	PAX2.p2	BC056937|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK129030|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK028999|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK137595|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK049523|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK046928|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	NM_001167994|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	NM_001167995|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	NM_172540|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
mm9_v1_chr16_-_60605072_60605085	0.12409	PAX2.p2	U58332|Epha6|13840|Eph receptor A6
mm9_v1_chr17_-_56556337_56556420	0.124085	PAX2.p2	S59186|Ptprs|19280|protein tyrosine phosphatase, receptor type, S
mm9_v1_chr8_-_87502592_87502646	0.123896	PAX2.p2	X54332|Junb|16477|Jun-B oncogene	BC092302|Junb|16477|Jun-B oncogene	BC003790|Junb|16477|Jun-B oncogene	AK155043|Junb|16477|Jun-B oncogene	AK150286|Junb|16477|Jun-B oncogene	AK156596|Junb|16477|Jun-B oncogene	AK159140|Junb|16477|Jun-B oncogene	AK159661|Junb|16477|Jun-B oncogene	AK088643|Junb|16477|Jun-B oncogene	AK141592|Junb|16477|Jun-B oncogene	AK144871|Junb|16477|Jun-B oncogene	AK145550|Junb|16477|Jun-B oncogene	AK149794|Junb|16477|Jun-B oncogene	AK150111|Junb|16477|Jun-B oncogene	AK150247|Junb|16477|Jun-B oncogene	AK159083|Junb|16477|Jun-B oncogene	AK159520|Junb|16477|Jun-B oncogene	AK160066|Junb|16477|Jun-B oncogene	NM_008416|Junb|16477|Jun-B oncogene	J03236|Junb|16477|Jun-B oncogene
mm9_v1_chr1_+_148344816_148344867	0.123833	PAX2.p2	NM_001145807|Fam5c|215378|family with sequence similarity 5, member C	AK083233|Fam5c|215378|family with sequence similarity 5, member C	BC030498|Fam5c|215378|family with sequence similarity 5, member C	AK140520|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr11_-_53293696_53293735	0.123634	PAX2.p2	NM_183173|Ankrd43|237761|ankyrin repeat domain 43
mm9_v1_chr6_-_108135548_108135588	0.123618	PAX2.p2	BC026981|Sumf1|58911|sulfatase modifying factor 1	AK160917|Sumf1|58911|sulfatase modifying factor 1	AK159192|Sumf1|58911|sulfatase modifying factor 1	AK161203|Sumf1|58911|sulfatase modifying factor 1	AK151874|Sumf1|58911|sulfatase modifying factor 1	NM_145937|Sumf1|58911|sulfatase modifying factor 1
mm9_v1_chr8_+_42325093_42325221	0.123171	PAX2.p2	AK133754|Pcm1|18536|pericentriolar material 1	AK011147|Pcm1|18536|pericentriolar material 1	AK141516|Pcm1|18536|pericentriolar material 1	NM_023662|Pcm1|18536|pericentriolar material 1	AF369838|Pcm1|18536|pericentriolar material 1	AB029291|Pcm1|18536|pericentriolar material 1	BC053728|Pcm1|18536|pericentriolar material 1	BC139033|Pcm1|18536|pericentriolar material 1
mm9_v1_chr16_-_20426357_20426468	0.123088	PAX2.p2	BC042581|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB019003|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC090629|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC061132|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_013790|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_176839|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr18_+_14941735_14941757	0.122937	PAX2.p2	AK012135|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001100449|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr5_+_35003027_35003160	0.122934	PAX2.p2	AK020792|Grk4|14772|G protein-coupled receptor kinase 4	AK132685|Grk4|14772|G protein-coupled receptor kinase 4	NM_001080743|Grk4|14772|G protein-coupled receptor kinase 4	NM_019497|Grk4|14772|G protein-coupled receptor kinase 4	AK078475|Grk4|14772|G protein-coupled receptor kinase 4
mm9_v1_chr14_-_124026097_124026182	0.122711	PAX2.p2	AK043071|Nalcn|338370|sodium leak channel, non-selective	AK036122|Nalcn|338370|sodium leak channel, non-selective	AK039034|Nalcn|338370|sodium leak channel, non-selective
mm9_v1_chr18_+_59334993_59335106	0.12226	PAX2.p2	NM_001081328|Chsy3|78923|chondroitin sulfate synthase 3	AK043732|Chsy3|78923|chondroitin sulfate synthase 3	AK044099|Chsy3|78923|chondroitin sulfate synthase 3	AK038429|Chsy3|78923|chondroitin sulfate synthase 3	AK048196|Chsy3|78923|chondroitin sulfate synthase 3	AK220519|Chsy3|78923|chondroitin sulfate synthase 3
mm9_v1_chr4_+_101927543_101927649	0.122203	PAX2.p2	NM_019840|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AF208023|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AJ297397|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK031977|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr5_-_149995789_149995819	0.122035	PAX2.p2	AK017599|5730422E09Rik|433966|RIKEN cDNA 5730422E09 gene
mm9_v1_chr4_+_101180625_101180708	0.121829	PAX2.p2	AK147570|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK147637|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr15_-_81846640_81846654	0.121764	PAX2.p2	AK170731|Pppde2|28075|PPPDE peptidase domain containing 2
mm9_v1_chr6_+_122258946_122259119	0.121555	PAX2.p2	AK153302|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK151607|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK149177|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK153474|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK004656|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK145913|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK153140|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK133943|M6pr|17113|mannose-6-phosphate receptor, cation dependent	X64068|M6pr|17113|mannose-6-phosphate receptor, cation dependent	BC046956|M6pr|17113|mannose-6-phosphate receptor, cation dependent	BC080811|M6pr|17113|mannose-6-phosphate receptor, cation dependent	NM_010749|M6pr|17113|mannose-6-phosphate receptor, cation dependent	BC027210|M6pr|17113|mannose-6-phosphate receptor, cation dependent	X56831|M6pr|17113|mannose-6-phosphate receptor, cation dependent	M63286|M6pr|17113|mannose-6-phosphate receptor, cation dependent
mm9_v1_chrX_-_131135346_131135571	0.121507	PAX2.p2	AK040081|Gla|11605|galactosidase, alpha	AK164231|Gla|11605|galactosidase, alpha	AK166204|Gla|11605|galactosidase, alpha	U50716|Gla|11605|galactosidase, alpha	AK145011|Gla|11605|galactosidase, alpha	AK166245|Gla|11605|galactosidase, alpha	U34071|Gla|11605|galactosidase, alpha	AK054547|Gla|11605|galactosidase, alpha	BC009021|Gla|11605|galactosidase, alpha	AK145148|Gla|11605|galactosidase, alpha	NM_013463|Gla|11605|galactosidase, alpha
mm9_v1_chr11_-_106077657_106077682	0.120948	PAX2.p2	AB040489|Ccdc47|67163|coiled-coil domain containing 47	AK078812|Ccdc47|67163|coiled-coil domain containing 47	NM_026009|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr5_+_138635541_138635706	0.120899	PAX2.p2	AK049381|Mblac1|330216|metallo-beta-lactamase domain containing 1	NM_177878|Mblac1|330216|metallo-beta-lactamase domain containing 1	BC038925|Mblac1|330216|metallo-beta-lactamase domain containing 1
mm9_v1_chr3_+_87946446_87946542	0.120698	PAX2.p2	S68893|Mef2d|17261|myocyte enhancer factor 2D	S68895|Mef2d|17261|myocyte enhancer factor 2D
mm9_v1_chr5_-_34530221_34530267	0.120541	PAX2.p2	U32395|Mxd4|17122|Max dimerization protein 4
mm9_v1_chr15_+_74552040_74552053	0.120261	PAX2.p2	AK019809|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chr3_+_159502766_159502808	0.120104	PAX2.p2	AK209732|Wls|68151|wntless homolog (Drosophila)	AK212097|Wls|68151|wntless homolog (Drosophila)
mm9_v1_chr4_+_135842023_135842037	0.120072	PAX2.p2	AK148255|Zfp46|22704|zinc finger protein 46
mm9_v1_chr17_+_24625782_24625829	0.119647	PAX2.p2	BC138443|Caskin1|268932|CASK interacting protein 1	BC145281|Caskin1|268932|CASK interacting protein 1
mm9_v1_chr15_+_103070840_103070935	0.119586	PAX2.p2	AK131999|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK136113|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK146630|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	NM_001039129|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	NM_010447|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK168531|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK135391|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK152684|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK161730|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK166901|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167161|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167810|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167811|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK168420|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK168733|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK169216|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK007802|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK088308|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK146126|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK166989|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167820|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	AK167913|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	M99167|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC052723|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC080675|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC092395|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC089340|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	BC083136|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	D86728|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1	D86729|Hnrnpa1|15382|heterogeneous nuclear ribonucleoprotein A1
mm9_v1_chr17_-_34168488_34168647	0.119079	PAX2.p2	BC115426|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	BC115427|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	M32010|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK159968|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK145956|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK087839|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK167344|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	NM_001077709|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	NM_008202|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7
mm9_v1_chr7_+_17038127_17038134	0.118907	PAX2.p2	BC028534|Tmem160|69094|transmembrane protein 160	NM_026938|Tmem160|69094|transmembrane protein 160
mm9_v1_chr5_+_139728268_139728480	0.11866	PAX2.p2	NM_026269|Get4|67604|golgi to ER traffic protein 4 homolog (S. cerevisiae)	AK003551|Get4|67604|golgi to ER traffic protein 4 homolog (S. cerevisiae)
mm9_v1_chr14_+_28051224_28051247	0.118392	PAX2.p2	AK004600|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	NM_027871|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	AK036737|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	AK036749|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3
mm9_v1_chr10_-_12581443_12581532	0.118187	PAX2.p2	Y12229|Utrn|22288|utrophin	NM_011682|Utrn|22288|utrophin
mm9_v1_chr17_+_36054140_36054142	0.117806	PAX2.p2	BC052059|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	NM_001163818|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AJ504718|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10
mm9_v1_chr6_-_134742342_134742495	0.117688	PAX2.p2	AB052157|Dusp16|70686|dual specificity phosphatase 16	BC059232|Dusp16|70686|dual specificity phosphatase 16	AF345951|Dusp16|70686|dual specificity phosphatase 16	AF345952|Dusp16|70686|dual specificity phosphatase 16	AF345953|Dusp16|70686|dual specificity phosphatase 16	AF345954|Dusp16|70686|dual specificity phosphatase 16	BC057321|Dusp16|70686|dual specificity phosphatase 16
mm9_v1_chr10_+_96945057_96945132	0.117624	PAX2.p2	BC132521|Dcn|13179|decorin	BC138564|Dcn|13179|decorin
mm9_v1_chr6_-_71582562_71582698	0.117575	PAX2.p2	BC059264|Kdm3a|104263|lysine (K)-specific demethylase 3A	AK144825|Kdm3a|104263|lysine (K)-specific demethylase 3A	NM_173001|Kdm3a|104263|lysine (K)-specific demethylase 3A
mm9_v1_chr15_+_81494352_81494363	0.117042	PAX2.p2	AK146632|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr1_-_135817945_135817982	0.117042	PAX2.p2	AK037150|Prelp|116847|proline arginine-rich end leucine-rich repeat	BC019775|Prelp|116847|proline arginine-rich end leucine-rich repeat	AK047480|Prelp|116847|proline arginine-rich end leucine-rich repeat	NM_054077|Prelp|116847|proline arginine-rich end leucine-rich repeat
mm9_v1_chr1_+_78813482_78813523	0.116861	PAX2.p2	AK133469|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	BC032920|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	BC034849|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	AF076533|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	NM_021342|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4
mm9_v1_chr19_+_10763393_10763462	0.116462	PAX2.p2	AK030717|Vps37c|107305|vacuolar protein sorting 37C (yeast)
mm9_v1_chr7_+_135381536_135381632	0.1163	PAX2.p2	BC032200|Armc5|233912|armadillo repeat containing 5	BC089363|Armc5|233912|armadillo repeat containing 5
mm9_v1_chr2_+_167514489_167514504	0.116089	PAX2.p2	M61007|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chr7_+_63305516_63305584	0.115817	PAX2.p2	NM_010418|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr11_-_106077627_106077641	0.115688	PAX2.p2	AK132273|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr11_-_118902163_118902213	0.115519	PAX2.p2	AB221673|Cbx8|30951|chromobox homolog 8 (Drosophila Pc class)	BC014815|Cbx8|30951|chromobox homolog 8 (Drosophila Pc class)
mm9_v1_chr4_+_119486921_119486941	0.115336	PAX2.p2	AK035881|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3
mm9_v1_chr2_-_132403832_132403957	0.11525	PAX2.p2	AK141374|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK050318|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC006887|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC033408|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK009137|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK163419|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK030645|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK165952|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK166454|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm9_v1_chr10_+_127848671_127848731	0.114917	PAX2.p2	AK045760|Rnf41|67588|ring finger protein 41	NM_001164237|Rnf41|67588|ring finger protein 41	NM_026259|Rnf41|67588|ring finger protein 41	AK030558|Rnf41|67588|ring finger protein 41	BC049078|Rnf41|67588|ring finger protein 41	AF305730|Rnf41|67588|ring finger protein 41
mm9_v1_chr9_-_32348863_32349036	0.114834	PAX2.p2	BC138791|Fli1|14247|Friend leukemia integration 1	BC138792|Fli1|14247|Friend leukemia integration 1	AK042111|Fli1|14247|Friend leukemia integration 1	AK154714|Fli1|14247|Friend leukemia integration 1	NM_008026|Fli1|14247|Friend leukemia integration 1	AK036655|Fli1|14247|Friend leukemia integration 1	X59421|Fli1|14247|Friend leukemia integration 1
mm9_v1_chr11_+_70338927_70338937	0.11481	PAX2.p2	U13393|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr11_+_70658271_70658306	0.114763	PAX2.p2	BC060166|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC009814|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC080274|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AK019413|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AK151901|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AK137236|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1
mm9_v1_chr3_+_65761643_65761679	0.114762	PAX2.p2	
mm9_v1_chr5_-_109058762_109058763	0.11465	PAX2.p2	BC065109|Gak|231580|cyclin G associated kinase
mm9_v1_chr5_+_125002866_125002933	0.114443	PAX2.p2	AK154422|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_001190795|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_026409|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK167149|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK012782|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK077525|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK129402|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK033741|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117786|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117787|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC043052|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK017554|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
mm9_v1_chr7_-_16872094_16872145	0.114181	PAX2.p2	AK134892|Ccdc9|243846|coiled-coil domain containing 9	NM_001136471|Ccdc9|243846|coiled-coil domain containing 9
mm9_v1_chr14_-_70205351_70205356	0.113986	PAX2.p2	AK021405|Rhobtb2|246710|Rho-related BTB domain containing 2	NM_153514|Rhobtb2|246710|Rho-related BTB domain containing 2
mm9_v1_chr7_-_71083734_71083823	0.113786	PAX2.p2	AJ245644|Klf13|50794|Kruppel-like factor 13	AJ275987|Klf13|50794|Kruppel-like factor 13	BC051557|Klf13|50794|Kruppel-like factor 13	AK155298|Klf13|50794|Kruppel-like factor 13	AF251796|Klf13|50794|Kruppel-like factor 13	NM_021366|Klf13|50794|Kruppel-like factor 13
mm9_v1_chr7_-_134417567_134417570	0.11332	PAX2.p2	AK149516|Sephs2|20768|selenophosphate synthetase 2
mm9_v1_chr3_+_157229838_157229863	0.113297	PAX2.p2	BC058742|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	NM_011196|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	D10204|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	D13321|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	D17406|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)
mm9_v1_chr15_-_75509153_75509239	0.113083	PAX2.p2	BC138582|Top1mt|72960|DNA topoisomerase 1, mitochondrial	BC138583|Top1mt|72960|DNA topoisomerase 1, mitochondrial	BC145336|Top1mt|72960|DNA topoisomerase 1, mitochondrial	AF362952|Top1mt|72960|DNA topoisomerase 1, mitochondrial	NM_028404|Top1mt|72960|DNA topoisomerase 1, mitochondrial	AK147119|Top1mt|72960|DNA topoisomerase 1, mitochondrial
mm9_v1_chr11_+_6315806_6315918	0.112987	PAX2.p2	AK160780|Ppia|268373|peptidylprolyl isomerase A	AK002236|Ppia|268373|peptidylprolyl isomerase A	AK007981|Ppia|268373|peptidylprolyl isomerase A	AK010649|Ppia|268373|peptidylprolyl isomerase A	AK012531|Ppia|268373|peptidylprolyl isomerase A	AK012663|Ppia|268373|peptidylprolyl isomerase A	AK028210|Ppia|268373|peptidylprolyl isomerase A	AK131942|Ppia|268373|peptidylprolyl isomerase A	AK136788|Ppia|268373|peptidylprolyl isomerase A	AK153030|Ppia|268373|peptidylprolyl isomerase A	AK160631|Ppia|268373|peptidylprolyl isomerase A	AK168035|Ppia|268373|peptidylprolyl isomerase A	AK169813|Ppia|268373|peptidylprolyl isomerase A	BC087928|Ppia|268373|peptidylprolyl isomerase A	AK151347|Ppia|268373|peptidylprolyl isomerase A	NM_008907|Ppia|268373|peptidylprolyl isomerase A	X52803|Ppia|268373|peptidylprolyl isomerase A	AK012491|Ppia|268373|peptidylprolyl isomerase A	AK012541|Ppia|268373|peptidylprolyl isomerase A	BC063097|Ppia|268373|peptidylprolyl isomerase A	BC099478|Ppia|268373|peptidylprolyl isomerase A	BC013713|Ppia|268373|peptidylprolyl isomerase A	BC083076|Ppia|268373|peptidylprolyl isomerase A	BC094272|Ppia|268373|peptidylprolyl isomerase A	BC094632|Ppia|268373|peptidylprolyl isomerase A	DQ985731|Ppia|268373|peptidylprolyl isomerase A
mm9_v1_chr5_-_93635416_93635523	0.112758	PAX2.p2	AK177544|Ccni|12453|cyclin I	AK079476|Ccni|12453|cyclin I	AK152614|Ccni|12453|cyclin I	AK050465|Ccni|12453|cyclin I	NM_017367|Ccni|12453|cyclin I
mm9_v1_chr16_-_17891608_17891820	0.112751	PAX2.p2	AK153026|Dgcr2|13356|DiGeorge syndrome critical region gene 2	X95480|Dgcr2|13356|DiGeorge syndrome critical region gene 2	BC062978|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK145495|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK042786|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK161022|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK163903|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK088131|Dgcr2|13356|DiGeorge syndrome critical region gene 2	D78641|Dgcr2|13356|DiGeorge syndrome critical region gene 2	BC060636|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK163872|Dgcr2|13356|DiGeorge syndrome critical region gene 2	AK141594|Dgcr2|13356|DiGeorge syndrome critical region gene 2	NM_001109750|Dgcr2|13356|DiGeorge syndrome critical region gene 2	NM_010048|Dgcr2|13356|DiGeorge syndrome critical region gene 2
mm9_v1_chr8_-_107779027_107779052	0.112628	PAX2.p2	AK169360|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene	NM_178879|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene	AK032108|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene
mm9_v1_chr3_-_40886957_40886982	0.112542	PAX2.p2	NM_027558|Pgrmc2|70804|progesterone receptor membrane component 2
mm9_v1_chr9_+_21397379_21397470	0.112457	PAX2.p2	AK088045|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK089121|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	BC025883|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK034762|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene
mm9_v1_chr6_+_120786207_120786296	0.112428	PAX2.p2	AK171256|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK148007|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK031018|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK088417|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK143457|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK132774|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK047223|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	BC029016|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	NM_153516|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK165068|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)	AK168833|Bcl2l13|94044|BCL2-like 13 (apoptosis facilitator)
mm9_v1_chr11_+_66891799_66891859	0.112163	PAX2.p2	AY963798|Myh3|17883|myosin, heavy polypeptide 3, skeletal muscle, embryonic	NM_001099635|Myh3|17883|myosin, heavy polypeptide 3, skeletal muscle, embryonic	DQ021874|Myh3|17883|myosin, heavy polypeptide 3, skeletal muscle, embryonic	DQ021875|Myh3|17883|myosin, heavy polypeptide 3, skeletal muscle, embryonic
mm9_v1_chr9_+_114640266_114640368	0.11214	PAX2.p2	AK171394|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152723|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152817|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK012941|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK150775|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151431|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152448|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK153092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	NM_026036|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK170905|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159735|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167854|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK128960|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK154481|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167499|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK030885|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK145743|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	BC027248|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK165948|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159439|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6
mm9_v1_chr9_-_21731973_21732007	0.111685	PAX2.p2	
mm9_v1_chr7_+_13551210_13551218	0.111568	PAX2.p2	BC053093|Zfp324|243834|zinc finger protein 324	NM_178732|Zfp324|243834|zinc finger protein 324	AK054407|Zfp324|243834|zinc finger protein 324	AK044240|Zfp324|243834|zinc finger protein 324	AK165922|Zfp324|243834|zinc finger protein 324
mm9_v1_chr1_+_89652645_89652774	0.111187	PAX2.p2	AK030983|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	NM_029846|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK145673|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK155358|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK163246|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK170073|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	BC049122|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK048873|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AK005181|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087879|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087880|Atg16l1|77040|autophagy-related 16-like 1 (yeast)	AB087881|Atg16l1|77040|autophagy-related 16-like 1 (yeast)
mm9_v1_chr16_-_94748235_94748235	0.110802	PAX2.p2	NM_007834|Dscr3|13185|Down syndrome critical region gene 3
mm9_v1_chr11_+_5662121_5662197	0.11057	PAX2.p2	AK009198|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	AK005556|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	AK008730|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	BC052911|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	BC094935|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene
mm9_v1_chr11_+_83943173_83943217	0.110556	PAX2.p2	AJ619664|Acaca|107476|acetyl-Coenzyme A carboxylase alpha	AK047036|Acaca|107476|acetyl-Coenzyme A carboxylase alpha	AK144072|Acaca|107476|acetyl-Coenzyme A carboxylase alpha	AK040794|Acaca|107476|acetyl-Coenzyme A carboxylase alpha
mm9_v1_chr16_+_94592359_94592368	0.11034	PAX2.p2	BC049277|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr10_-_42893894_42894226	0.109949	PAX2.p2	DQ157775|Sobp|109205|sine oculis-binding protein homolog (Drosophila)	BC057055|Sobp|109205|sine oculis-binding protein homolog (Drosophila)
mm9_v1_chr2_+_76244559_76244570	0.109941	PAX2.p2	AK004353|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr1_+_154802198_154802230	0.109924	PAX2.p2	BC089007|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	NM_175460|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr11_-_69609411_69609422	0.109502	PAX2.p2	AK087554|Chrnb1|11443|cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)
mm9_v1_chr3_-_59066744_59066767	0.109323	PAX2.p2	BC025428|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12	AK013804|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12	NM_027571|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12
mm9_v1_chr19_+_16207300_16207320	0.109187	PAX2.p2	AK147393|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide	NM_008139|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide
mm9_v1_chr14_-_62301012_62301198	0.109081	PAX2.p2	AK080165|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK139063|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK134888|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK042416|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK084358|Dleu2|668253|deleted in lymphocytic leukemia, 2	AF380423|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK165901|Dleu2|668253|deleted in lymphocytic leukemia, 2
mm9_v1_chr1_-_43220725_43220782	0.108932	PAX2.p2	AK133708|Fhl2|14200|four and a half LIM domains 2
mm9_v1_chr11_+_109287259_109287319	0.108373	PAX2.p2	NM_025275|Amz2|13929|archaelysin family metallopeptidase 2	AK077195|Amz2|13929|archaelysin family metallopeptidase 2	AK143908|Amz2|13929|archaelysin family metallopeptidase 2	AK004062|Amz2|13929|archaelysin family metallopeptidase 2	AK075748|Amz2|13929|archaelysin family metallopeptidase 2
mm9_v1_chr2_-_155652217_155652350	0.108246	PAX2.p2	AK165946|Eif6|16418|eukaryotic translation initiation factor 6
mm9_v1_chr1_-_129670601_129670630	0.108199	PAX2.p2	AK013506|2900009J06Rik|72887|RIKEN cDNA 2900009J06 gene
mm9_v1_chr1_-_75138905_75138941	0.108183	PAX2.p2	BC028815|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK029090|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	NM_026977|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chrX_+_7419623_7419812	0.108162	PAX2.p2	AK167226|Otud5|54644|OTU domain containing 5	AF229642|Otud5|54644|OTU domain containing 5
mm9_v1_chr11_-_70051081_70051130	0.108052	PAX2.p2	
mm9_v1_chr1_-_64125352_64125397	0.107704	PAX2.p2	AK086122|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK036514|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr9_+_74800828_74800859	0.107501	PAX2.p2	BC060215|BC031353|235493|cDNA sequence BC031353	NM_001113283|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr17_+_29839370_29839515	0.107203	PAX2.p2	
mm9_v1_chr9_+_57369044_57369118	0.107108	PAX2.p2	BC003831|Cox5a|12858|cytochrome c oxidase, subunit Va	BC034302|Cox5a|12858|cytochrome c oxidase, subunit Va	AK018723|Cox5a|12858|cytochrome c oxidase, subunit Va	X15963|Cox5a|12858|cytochrome c oxidase, subunit Va
mm9_v1_chr1_-_66864031_66864049	0.106935	PAX2.p2	BC141036|1110028C15Rik|68691|RIKEN cDNA 1110028C15 gene
mm9_v1_chr6_+_48487567_48487613	0.10653	PAX2.p2	NM_133764|Atp6v0e2|76252|ATPase, H+ transporting, lysosomal V0 subunit E2	BC010790|Atp6v0e2|76252|ATPase, H+ transporting, lysosomal V0 subunit E2
mm9_v1_chr7_+_28233013_28233084	0.106322	PAX2.p2	BC006617|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))	AK153153|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))
mm9_v1_chr11_-_116714173_116714405	0.106082	PAX2.p2	AK204489|Srsf2|20382|serine/arginine-rich splicing factor 2	L13610|Srsf2|20382|serine/arginine-rich splicing factor 2	BC005493|Srsf2|20382|serine/arginine-rich splicing factor 2	AF077858|Srsf2|20382|serine/arginine-rich splicing factor 2	U14648|Srsf2|20382|serine/arginine-rich splicing factor 2	AK161873|Srsf2|20382|serine/arginine-rich splicing factor 2	AK011528|Srsf2|20382|serine/arginine-rich splicing factor 2	AK076448|Srsf2|20382|serine/arginine-rich splicing factor 2	AK086103|Srsf2|20382|serine/arginine-rich splicing factor 2	AK088042|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chrX_-_147779368_147779423	0.105409	PAX2.p2	AK038885|A230072E10Rik|331547|RIKEN cDNA A230072E10 gene	BC025887|A230072E10Rik|331547|RIKEN cDNA A230072E10 gene
mm9_v1_chr2_+_30219752_30219824	0.105406	PAX2.p2	AK165996|Fam73b|108958|family with sequence similarity 73, member B	AK154200|Fam73b|108958|family with sequence similarity 73, member B	AK140122|Fam73b|108958|family with sequence similarity 73, member B	AK040713|Fam73b|108958|family with sequence similarity 73, member B	AK077618|Fam73b|108958|family with sequence similarity 73, member B
mm9_v1_chr19_-_58935417_58935456	0.105323	PAX2.p2	AB093239|Hspa12a|73442|heat shock protein 12A	BC030362|Hspa12a|73442|heat shock protein 12A	AK038491|Hspa12a|73442|heat shock protein 12A	AK006867|Hspa12a|73442|heat shock protein 12A
mm9_v1_chr2_-_4985090_4985137	0.105102	PAX2.p2	AY071834|Optn|71648|optineurin
mm9_v1_chr2_+_112295368_112295418	0.105023	PAX2.p2	AK204049|2900064A13Rik|73024|RIKEN cDNA 2900064A13 gene
mm9_v1_chr2_+_157105117_157105161	0.104395	PAX2.p2	AK153952|Rpn2|20014|ribophorin II
mm9_v1_chr17_+_73186929_73186985	0.104229	PAX2.p2	BC085109|Ypel5|383295|yippee-like 5 (Drosophila)
mm9_v1_chr14_+_58445584_58445682	0.104206	PAX2.p2	AK212819|Mrp63|67840|mitochondrial ribosomal protein 63
mm9_v1_chr17_+_36002537_36002569	0.104129	PAX2.p2	BC025573|2310014H01Rik|76448|RIKEN cDNA 2310014H01 gene	NM_001146711|2310014H01Rik|76448|RIKEN cDNA 2310014H01 gene	BC145183|2310014H01Rik|76448|RIKEN cDNA 2310014H01 gene	BC150725|2310014H01Rik|76448|RIKEN cDNA 2310014H01 gene
mm9_v1_chr7_-_28013615_28013697	0.103597	PAX2.p2	BC053450|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C	NM_181593|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C	AK154888|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C	AK051297|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C
mm9_v1_chr17_+_73457324_73457400	0.103592	PAX2.p2	NM_001081071|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177967|Lclat1|225010|lysocardiolipin acyltransferase 1	NM_001177968|Lclat1|225010|lysocardiolipin acyltransferase 1	AK144580|Lclat1|225010|lysocardiolipin acyltransferase 1	BC147499|Lclat1|225010|lysocardiolipin acyltransferase 1	BC150884|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158076|Lclat1|225010|lysocardiolipin acyltransferase 1	BC158079|Lclat1|225010|lysocardiolipin acyltransferase 1
mm9_v1_chr2_-_90910439_90910494	0.103541	PAX2.p2	BC100463|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13
mm9_v1_chr17_+_36117612_36117622	0.103459	PAX2.p2	X65026|Gnl1|14670|guanine nucleotide binding protein-like 1
mm9_v1_chr5_-_135825744_135825913	0.103042	PAX2.p2	AY029192|Fkbp6|94244|FK506 binding protein 6	AF367710|Fkbp6|94244|FK506 binding protein 6	AF367711|Fkbp6|94244|FK506 binding protein 6	NM_033571|Fkbp6|94244|FK506 binding protein 6	AF367709|Fkbp6|94244|FK506 binding protein 6	AK090036|Fkbp6|94244|FK506 binding protein 6	BC139092|Fkbp6|94244|FK506 binding protein 6	BC139097|Fkbp6|94244|FK506 binding protein 6
mm9_v1_chr13_-_55672471_55672500	0.102892	PAX2.p2	AK155237|Fam193b|212483|family with sequence similarity 193, member B	NM_145382|Fam193b|212483|family with sequence similarity 193, member B
mm9_v1_chr2_+_22751003_22751041	0.102684	PAX2.p2	NM_019501|Pdss1|56075|prenyl (solanesyl) diphosphate synthase, subunit 1
mm9_v1_chr1_+_135260143_135260212	0.102479	PAX2.p2	NM_175443|Etnk2|214253|ethanolamine kinase 2	BC152310|Etnk2|214253|ethanolamine kinase 2
mm9_v1_chr7_-_52271450_52271636	0.101698	PAX2.p2	BC042576|Scaf1|233208|SR-related CTD-associated factor 1	AK141920|Scaf1|233208|SR-related CTD-associated factor 1	BC085153|Scaf1|233208|SR-related CTD-associated factor 1	NM_001008422|Scaf1|233208|SR-related CTD-associated factor 1	BC079873|Scaf1|233208|SR-related CTD-associated factor 1
mm9_v1_chr13_+_58909254_58909275	0.100216	PAX2.p2	AK147391|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr10_+_127472725_127472748	0.100114	PAX2.p2	U22151|Naca|17938|nascent polypeptide-associated complex alpha polypeptide	BC099375|Naca|17938|nascent polypeptide-associated complex alpha polypeptide
mm9_v1_chr9_-_69989285_69989363	0.0999326	PAX2.p2	AK038532|Fam81a|76886|family with sequence similarity 81, member A	AK079541|Fam81a|76886|family with sequence similarity 81, member A	AK018282|Fam81a|76886|family with sequence similarity 81, member A	AK044090|Fam81a|76886|family with sequence similarity 81, member A	NM_029784|Fam81a|76886|family with sequence similarity 81, member A
mm9_v1_chr16_-_90284552_90284747	0.0998315	PAX2.p2	BC053096|Scaf4|224432|SR-related CTD-associated factor 4	AK045266|Scaf4|224432|SR-related CTD-associated factor 4	BC057592|Scaf4|224432|SR-related CTD-associated factor 4	NM_178923|Scaf4|224432|SR-related CTD-associated factor 4	AK048239|Scaf4|224432|SR-related CTD-associated factor 4	AK173120|Scaf4|224432|SR-related CTD-associated factor 4
mm9_v1_chr5_-_92707164_92707208	0.0997073	PAX2.p2	AB162194|Naaa|67111|N-acylethanolamine acid amidase	BC004572|Naaa|67111|N-acylethanolamine acid amidase	AK014438|Naaa|67111|N-acylethanolamine acid amidase	AK017141|Naaa|67111|N-acylethanolamine acid amidase	AK133485|Naaa|67111|N-acylethanolamine acid amidase	AK146191|Naaa|67111|N-acylethanolamine acid amidase	AK008776|Naaa|67111|N-acylethanolamine acid amidase	AK133658|Naaa|67111|N-acylethanolamine acid amidase	NM_001163687|Naaa|67111|N-acylethanolamine acid amidase	NM_025972|Naaa|67111|N-acylethanolamine acid amidase
mm9_v1_chr17_+_34093007_34093064	0.0995549	PAX2.p2	AX775735|Vps52|224705|vacuolar protein sorting 52 (yeast)
mm9_v1_chr11_-_94538693_94538823	0.0994969	PAX2.p2	AJ291751|Xylt2|217119|xylosyltransferase II	AK086804|Xylt2|217119|xylosyltransferase II	AK150521|Xylt2|217119|xylosyltransferase II	AK153332|Xylt2|217119|xylosyltransferase II	AK083482|Xylt2|217119|xylosyltransferase II	AK158056|Xylt2|217119|xylosyltransferase II	NM_145828|Xylt2|217119|xylosyltransferase II
mm9_v1_chr1_-_182413583_182413634	0.098721	PAX2.p2	AK031805|6330403A02Rik|381310|RIKEN cDNA 6330403A02 gene	NM_001081227|6330403A02Rik|381310|RIKEN cDNA 6330403A02 gene
mm9_v1_chr14_+_63760617_63760645	0.0985433	PAX2.p2	AK190827|Ctsb|13030|cathepsin B
mm9_v1_chr17_-_33084274_33084351	0.0982714	PAX2.p2	AF233643|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13	NM_130882|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13	BC003954|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13	BC058330|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13	AK085008|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13
mm9_v1_chr8_-_109580546_109580561	0.0979669	PAX2.p2	AB041610|Cog8|97484|component of oligomeric golgi complex 8
mm9_v1_chr5_-_143666064_143666381	0.0977155	PAX2.p2	AK218630|Actb|11461|actin, beta	BC040513|Actb|11461|actin, beta	AB028847|Actb|11461|actin, beta	AK212447|Actb|11461|actin, beta	AY618569|Actb|11461|actin, beta	U89400|Actb|11461|actin, beta	AK187650|Actb|11461|actin, beta	AK201181|Actb|11461|actin, beta	AK204356|Actb|11461|actin, beta	AK208556|Actb|11461|actin, beta
mm9_v1_chr11_+_81849074_81849163	0.0976071	PAX2.p2	AK150937|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153468|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153520|Ccl2|20296|chemokine (C-C motif) ligand 2	NM_011333|Ccl2|20296|chemokine (C-C motif) ligand 2	AK132590|Ccl2|20296|chemokine (C-C motif) ligand 2	AK151789|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153443|Ccl2|20296|chemokine (C-C motif) ligand 2	BC055070|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145867|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145869|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065929|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065930|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065931|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065932|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065933|Ccl2|20296|chemokine (C-C motif) ligand 2	CT010187|Ccl2|20296|chemokine (C-C motif) ligand 2
mm9_v1_chr2_+_102390226_102390305	0.0975085	PAX2.p2	AK035434|Pamr1|210622|peptidase domain containing associated with muscle regeneration 1	AK088017|Pamr1|210622|peptidase domain containing associated with muscle regeneration 1	AK031254|Pamr1|210622|peptidase domain containing associated with muscle regeneration 1
mm9_v1_chr4_+_155367019_155367119	0.0975048	PAX2.p2	D50461|Sdf4|20318|stromal cell derived factor 4	BC068152|Sdf4|20318|stromal cell derived factor 4	NM_011341|Sdf4|20318|stromal cell derived factor 4	AK090319|Sdf4|20318|stromal cell derived factor 4	U45977|Sdf4|20318|stromal cell derived factor 4
mm9_v1_chr10_+_116018336_116018351	0.0975024	PAX2.p2	AK077360|5330438D12Rik|327824|RIKEN cDNA 5330438D12 gene
mm9_v1_chr1_-_72258684_72258880	0.0972723	PAX2.p2	AY628210|Mreg|381269|melanoregulin	BC068125|Mreg|381269|melanoregulin	NM_001005423|Mreg|381269|melanoregulin
mm9_v1_chr13_-_108948762_108948841	0.0965499	PAX2.p2	AB183434|Ndufaf2|75597|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2	AY262012|Ndufaf2|75597|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2	BC048512|Ndufaf2|75597|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2	AK166492|Ndufaf2|75597|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2	BC116975|Ndufaf2|75597|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2	BC116977|Ndufaf2|75597|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2	BC144716|Ndufaf2|75597|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2	AK007894|Ndufaf2|75597|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2	AK080810|B230220B15Rik|320723|RIKEN cDNA B230220B15 gene	NM_001127346|Ndufaf2|75597|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2
mm9_v1_chr8_-_110112368_110112383	0.0964618	PAX2.p2	NM_010817|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm9_v1_chr9_-_20447047_20447249	0.0964604	PAX2.p2	AF176525|Fbxl12|30843|F-box and leucine-rich repeat protein 12	BC054471|Fbxl12|30843|F-box and leucine-rich repeat protein 12	NM_013911|Fbxl12|30843|F-box and leucine-rich repeat protein 12
mm9_v1_chr1_-_134036041_134036303	0.0963816	PAX2.p2	AK171569|Cdk18|18557|cyclin-dependent kinase 18	BC119617|Cdk18|18557|cyclin-dependent kinase 18	BC119618|Cdk18|18557|cyclin-dependent kinase 18	AK004998|Cdk18|18557|cyclin-dependent kinase 18	X69026|Cdk18|18557|cyclin-dependent kinase 18	NM_008795|Cdk18|18557|cyclin-dependent kinase 18
mm9_v1_chr4_+_108673212_108673409	0.0958345	PAX2.p2	AK166470|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1	BC036128|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1	BC026832|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1	AK031548|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1	NM_146150|Nrd1|230598|nardilysin, N-arginine dibasic convertase, NRD convertase 1
mm9_v1_chr11_-_88725877_88725929	0.0956214	PAX2.p2	AK076216|Akap1|11640|A kinase (PRKA) anchor protein 1	NM_001042541|Akap1|11640|A kinase (PRKA) anchor protein 1
mm9_v1_chr5_-_144984420_144984479	0.0951167	PAX2.p2	AK032858|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK034020|Tecpr1|70381|tectonin beta-propeller repeat containing 1	BC046968|Tecpr1|70381|tectonin beta-propeller repeat containing 1	NM_027410|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK163522|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr2_+_121239637_121239649	0.09473	PAX2.p2	NM_007952|Pdia3|14827|protein disulfide isomerase associated 3
mm9_v1_chr19_+_23216035_23216244	0.0943508	PAX2.p2	CT010185|Klf9|16601|Kruppel-like factor 9	Y14296|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr10_-_39745065_39745113	0.0943484	PAX2.p2	AK089961|AI317395|215929|expressed sequence AI317395	NM_144821|AI317395|215929|expressed sequence AI317395
mm9_v1_chr7_-_27951724_27951820	0.0936976	PAX2.p2	AF453879|Egln2|112406|EGL nine homolog 2 (C. elegans)	BC023299|Egln2|112406|EGL nine homolog 2 (C. elegans)	BC086764|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK075582|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK159206|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK167477|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK152223|Egln2|112406|EGL nine homolog 2 (C. elegans)	AK152056|Egln2|112406|EGL nine homolog 2 (C. elegans)	AJ310547|Egln2|112406|EGL nine homolog 2 (C. elegans)	NM_053208|Egln2|112406|EGL nine homolog 2 (C. elegans)
mm9_v1_chr15_-_103070227_103070257	0.093651	PAX2.p2	BC004707|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001076789|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr19_-_5688608_5688698	0.0935593	PAX2.p2	AK171516|Pcnxl3|104401|pecanex-like 3 (Drosophila)
mm9_v1_chr17_+_21082449_21082458	0.0935519	PAX2.p2	AK078135|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform	AK054239|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
mm9_v1_chr17_+_87153425_87153527	0.0931806	PAX2.p2	AF045160|Epas1|13819|endothelial PAS domain protein 1	AK141185|Epas1|13819|endothelial PAS domain protein 1	BC057870|Epas1|13819|endothelial PAS domain protein 1	U81983|Epas1|13819|endothelial PAS domain protein 1
mm9_v1_chrX_+_7339942_7339952	0.0931004	PAX2.p2	AF510653|Tcfe3|209446|transcription factor E3
mm9_v1_chr11_-_119948078_119948092	0.0927016	PAX2.p2	BC141108|Azi1|12009|5-azacytidine induced gene 1
mm9_v1_chr4_+_138936531_138936597	0.0924049	PAX2.p2	NM_001160319|Ubr4|69116|ubiquitin protein ligase E3 component n-recognin 4	AK086097|Ubr4|69116|ubiquitin protein ligase E3 component n-recognin 4
mm9_v1_chr7_-_133920316_133920331	0.0915117	PAX2.p2	AK035633|Gm9967|100038751|predicted gene 9967
mm9_v1_chr11_+_106650565_106650638	0.0913365	PAX2.p2	NM_001166685|Ccdc45|320162|coiled-coil domain containing 45	NM_177088|Ccdc45|320162|coiled-coil domain containing 45	AK076400|Ccdc45|320162|coiled-coil domain containing 45	AK165351|Ccdc45|320162|coiled-coil domain containing 45	BC116308|Ccdc45|320162|coiled-coil domain containing 45	BC116309|Ccdc45|320162|coiled-coil domain containing 45	BC090675|Ccdc45|320162|coiled-coil domain containing 45	AK052705|Ccdc45|320162|coiled-coil domain containing 45
mm9_v1_chr19_+_8994860_8994941	0.0911994	PAX2.p2	AK144402|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC004038|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	NM_024256|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK048428|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC012930|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK140424|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
mm9_v1_chr8_+_74200281_74200478	0.091054	PAX2.p2	NM_001190830|Jak3|16453|Janus kinase 3	NM_010589|Jak3|16453|Janus kinase 3	AK088365|Jak3|16453|Janus kinase 3	L40172|Jak3|16453|Janus kinase 3	AK164520|Jak3|16453|Janus kinase 3	AK142178|Jak3|16453|Janus kinase 3	BC027234|Jak3|16453|Janus kinase 3	AK156646|Jak3|16453|Janus kinase 3
mm9_v1_chr14_-_37948251_37948510	0.091023	PAX2.p2	AK159695|Ghitm|66092|growth hormone inducible transmembrane protein	AK168678|Ghitm|66092|growth hormone inducible transmembrane protein	AK146433|Ghitm|66092|growth hormone inducible transmembrane protein	AK134592|Ghitm|66092|growth hormone inducible transmembrane protein	AF412297|Ghitm|66092|growth hormone inducible transmembrane protein	AK005636|Ghitm|66092|growth hormone inducible transmembrane protein	AK164122|Ghitm|66092|growth hormone inducible transmembrane protein	NM_078478|Ghitm|66092|growth hormone inducible transmembrane protein	AK168800|Ghitm|66092|growth hormone inducible transmembrane protein	AK146853|Ghitm|66092|growth hormone inducible transmembrane protein	AK159724|Ghitm|66092|growth hormone inducible transmembrane protein	AK167970|Ghitm|66092|growth hormone inducible transmembrane protein	AK093887|Ghitm|66092|growth hormone inducible transmembrane protein	AK151488|Ghitm|66092|growth hormone inducible transmembrane protein	AK168022|Ghitm|66092|growth hormone inducible transmembrane protein	BC008622|Ghitm|66092|growth hormone inducible transmembrane protein	BC010224|Ghitm|66092|growth hormone inducible transmembrane protein	AK158904|Ghitm|66092|growth hormone inducible transmembrane protein
mm9_v1_chr2_-_129135707_129135713	0.0909534	PAX2.p2	AK156449|Il1a|16175|interleukin 1 alpha	NM_010554|Il1a|16175|interleukin 1 alpha	X01450|Il1a|16175|interleukin 1 alpha
mm9_v1_chr4_-_148800731_148800857	0.0908279	PAX2.p2	AK016689|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	NM_022022|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	AF260926|Ube4b|63958|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm9_v1_chr17_+_29405841_29405930	0.0905586	PAX2.p2	BC004004|BC004004|80748|cDNA sequence BC004004	AK157037|BC004004|80748|cDNA sequence BC004004	BC058575|BC004004|80748|cDNA sequence BC004004
mm9_v1_chr5_-_128097687_128097794	0.0901759	PAX2.p2	BC016233|Slc15a4|100561|solute carrier family 15, member 4	NM_133895|Slc15a4|100561|solute carrier family 15, member 4	AY050630|Slc15a4|100561|solute carrier family 15, member 4	AK048529|Slc15a4|100561|solute carrier family 15, member 4	AK154238|Slc15a4|100561|solute carrier family 15, member 4
mm9_v1_chr5_+_115777413_115777475	0.0896801	PAX2.p2	AK020084|Srsf9|108014|serine/arginine-rich splicing factor 9
mm9_v1_chr8_+_12757011_12757296	0.0895497	PAX2.p2	AK147497|Atp11a|50770|ATPase, class VI, type 11A	NM_015804|Atp11a|50770|ATPase, class VI, type 11A	AF156551|Atp11a|50770|ATPase, class VI, type 11A	BC145399|Atp11a|50770|ATPase, class VI, type 11A	BC145400|Atp11a|50770|ATPase, class VI, type 11A	BC138715|Atp11a|50770|ATPase, class VI, type 11A
mm9_v1_chr16_+_38089607_38089652	0.0894661	PAX2.p2	AK154293|Gsk3b|56637|glycogen synthase kinase 3 beta	AK170965|Gsk3b|56637|glycogen synthase kinase 3 beta
mm9_v1_chr2_+_157104738_157104878	0.0891263	PAX2.p2	AK018761|Rpn2|20014|ribophorin II	BC046806|Rpn2|20014|ribophorin II	AK004968|Rpn2|20014|ribophorin II	NM_019642|Rpn2|20014|ribophorin II
mm9_v1_chr4_+_101927346_101927346	0.0890758	PAX2.p2	BC049864|Pde4b|18578|phosphodiesterase 4B, cAMP specific	NM_001177983|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr1_+_136352075_136352146	0.0889157	PAX2.p2	AK034170|Klhl12|240756|kelch-like 12 (Drosophila)	AK165280|Klhl12|240756|kelch-like 12 (Drosophila)	BC034514|Klhl12|240756|kelch-like 12 (Drosophila)	NM_153128|Klhl12|240756|kelch-like 12 (Drosophila)
mm9_v1_chr2_-_130490305_130490347	0.088702	PAX2.p2	AK011170|Ddrgk1|77006|DDRGK domain containing 1
mm9_v1_chr10_-_80522871_80522963	0.0882437	PAX2.p2	AK039966|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	BC003836|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	NM_024499|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK051005|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK079168|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK165557|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm9_v1_chr3_+_28680223_28680237	0.0881793	PAX2.p2	AY205262|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AY205263|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AY205264|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AY205265|Eif5a2|208691|eukaryotic translation initiation factor 5A2	NM_177586|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AK036127|Eif5a2|208691|eukaryotic translation initiation factor 5A2
mm9_v1_chr4_-_115817140_115817220	0.0881346	PAX2.p2	BC147058|1520402A15Rik|68075|RIKEN cDNA 1520402A15 gene	BC147059|1520402A15Rik|68075|RIKEN cDNA 1520402A15 gene	BC147737|1520402A15Rik|68075|RIKEN cDNA 1520402A15 gene	BC147750|1520402A15Rik|68075|RIKEN cDNA 1520402A15 gene	AK013564|1520402A15Rik|68075|RIKEN cDNA 1520402A15 gene	NM_026547|1520402A15Rik|68075|RIKEN cDNA 1520402A15 gene
mm9_v1_chr12_+_81744869_81744959	0.0881026	PAX2.p2	BC058649|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr19_-_5843912_5843983	0.0879787	PAX2.p2	
mm9_v1_chr13_+_83663817_83664004	0.0879194	PAX2.p2	AK036940|Mef2c|17260|myocyte enhancer factor 2C	AK077603|Mef2c|17260|myocyte enhancer factor 2C	AK172512|Mef2c|17260|myocyte enhancer factor 2C	AK172537|Mef2c|17260|myocyte enhancer factor 2C	AK047994|Mef2c|17260|myocyte enhancer factor 2C	AK043267|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr16_-_91647216_91647232	0.0877477	PAX2.p2	NM_010256|Gart|14450|phosphoribosylglycinamide formyltransferase
mm9_v1_chr2_+_155343804_155343878	0.0875915	PAX2.p2	AK053877|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK086921|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK041520|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK029014|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AF216873|Acss2|60525|acyl-CoA synthetase short-chain family member 2	BC040790|Acss2|60525|acyl-CoA synthetase short-chain family member 2
mm9_v1_chr6_+_136756729_136756803	0.0875888	PAX2.p2	NM_177688|H2afj|232440|H2A histone family, member J	BC099606|H2afj|232440|H2A histone family, member J
mm9_v1_chr4_-_62021557_62021583	0.0875397	PAX2.p2	AK085087|Fkbp15|338355|FK506 binding protein 15	AK049509|Fkbp15|338355|FK506 binding protein 15	NM_001045528|Fkbp15|338355|FK506 binding protein 15
mm9_v1_chr11_+_74644441_74644466	0.0871363	PAX2.p2	AK147933|Mnt|17428|max binding protein
mm9_v1_chr13_+_58909632_58909641	0.0869442	PAX2.p2	AK147441|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr9_-_108551631_108551731	0.0867673	PAX2.p2	AK165028|Arih2|23807|ariadne homolog 2 (Drosophila)	AK149936|Arih2|23807|ariadne homolog 2 (Drosophila)	BC051998|Arih2|23807|ariadne homolog 2 (Drosophila)	BC052422|Arih2|23807|ariadne homolog 2 (Drosophila)	NM_011790|Arih2|23807|ariadne homolog 2 (Drosophila)	AK011094|Arih2|23807|ariadne homolog 2 (Drosophila)	AK168055|Arih2|23807|ariadne homolog 2 (Drosophila)
mm9_v1_chr2_+_157854434_157854436	0.0866687	PAX2.p2	AK152125|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	AK152220|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B
mm9_v1_chr7_-_106289616_106289631	0.0866088	PAX2.p2	BC034176|Uvrag|78610|UV radiation resistance associated gene	AK020590|Uvrag|78610|UV radiation resistance associated gene	AK043084|Uvrag|78610|UV radiation resistance associated gene	AK165185|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr4_+_132120098_132120146	0.0866023	PAX2.p2	AK032547|Ptafr|19204|platelet-activating factor receptor
mm9_v1_chr2_-_25325248_25325271	0.0863347	PAX2.p2	AB006361|Ptgds|19215|prostaglandin D2 synthase (brain)	BC043015|Ptgds|19215|prostaglandin D2 synthase (brain)	AK131859|Ptgds|19215|prostaglandin D2 synthase (brain)	NM_008963|Ptgds|19215|prostaglandin D2 synthase (brain)
mm9_v1_chr4_-_141155782_141155838	0.0860833	PAX2.p2	X66903|Fblim1|74202|filamin binding LIM protein 1	NM_001163256|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr6_-_116158008_116158043	0.0856921	PAX2.p2	AK020619|9530062K07Rik|78739|RIKEN cDNA 9530062K07 gene
mm9_v1_chr1_+_55109613_55109667	0.0855947	PAX2.p2	AK006551|Coq10b|67876|coenzyme Q10 homolog B (S. cerevisiae)	AK015454|Coq10b|67876|coenzyme Q10 homolog B (S. cerevisiae)	NM_001039710|Coq10b|67876|coenzyme Q10 homolog B (S. cerevisiae)	NM_026424|Coq10b|67876|coenzyme Q10 homolog B (S. cerevisiae)	AK012117|Coq10b|67876|coenzyme Q10 homolog B (S. cerevisiae)
mm9_v1_chr18_+_61204798_61204855	0.0855063	PAX2.p2	BC055311|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	NM_001146268|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	NM_008809|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	AK143247|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	AK134785|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide
mm9_v1_chr7_+_52003841_52004004	0.0854738	PAX2.p2	AK150435|Vrk3|101568|vaccinia related kinase 3	AK171673|Vrk3|101568|vaccinia related kinase 3	BC024839|Vrk3|101568|vaccinia related kinase 3	NM_133945|Vrk3|101568|vaccinia related kinase 3	BC027129|Vrk3|101568|vaccinia related kinase 3
mm9_v1_chr7_+_26052714_26052731	0.0852009	PAX2.p2	AK147535|Cic|71722|capicua homolog (Drosophila)
mm9_v1_chr13_-_19487596_19487657	0.0851804	PAX2.p2	AK018331|Stard3nl|76205|STARD3 N-terminal like	AK152378|Stard3nl|76205|STARD3 N-terminal like	BC003334|Stard3nl|76205|STARD3 N-terminal like	NM_024270|Stard3nl|76205|STARD3 N-terminal like
mm9_v1_chr10_+_45009110_45009287	0.0851281	PAX2.p2	AK052325|Popdc3|78977|popeye domain containing 3	NM_024286|Popdc3|78977|popeye domain containing 3	AK039691|Popdc3|78977|popeye domain containing 3	BC114993|Popdc3|78977|popeye domain containing 3
mm9_v1_chr1_+_173259275_173259328	0.0848424	PAX2.p2	NM_001128609|Dedd|21945|death effector domain-containing	NM_011615|Dedd|21945|death effector domain-containing	AK157609|Dedd|21945|death effector domain-containing
mm9_v1_chr3_+_90417072_90417127	0.0846545	PAX2.p2	AK008241|S100a6|20200|S100 calcium binding protein A6 (calcyclin)	AK008941|S100a6|20200|S100 calcium binding protein A6 (calcyclin)	AK151587|S100a6|20200|S100 calcium binding protein A6 (calcyclin)	M37761|S100a6|20200|S100 calcium binding protein A6 (calcyclin)	X52278|S100a6|20200|S100 calcium binding protein A6 (calcyclin)	AK150408|S100a6|20200|S100 calcium binding protein A6 (calcyclin)	AK151144|S100a6|20200|S100 calcium binding protein A6 (calcyclin)	AF549497|S100a6|20200|S100 calcium binding protein A6 (calcyclin)
mm9_v1_chr11_+_109224104_109224273	0.0839685	PAX2.p2	NM_010303|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK011851|Gna13|14674|guanine nucleotide binding protein, alpha 13	M63660|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK149766|Gna13|14674|guanine nucleotide binding protein, alpha 13	BC057665|Gna13|14674|guanine nucleotide binding protein, alpha 13
mm9_v1_chr2_-_178149153_178149214	0.0839469	PAX2.p2	NM_001085501|Ppp1r3d|228966|protein phosphatase 1, regulatory subunit 3D
mm9_v1_chr16_+_94792513_94792513	0.0834995	PAX2.p2	NM_001113389|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr10_-_84647533_84647834	0.0833134	PAX2.p2	AF156986|Cry1|12952|cryptochrome 1 (photolyase-like)	BC022174|Cry1|12952|cryptochrome 1 (photolyase-like)	AK162460|Cry1|12952|cryptochrome 1 (photolyase-like)	BC085499|Cry1|12952|cryptochrome 1 (photolyase-like)	NM_007771|Cry1|12952|cryptochrome 1 (photolyase-like)	AK133818|Cry1|12952|cryptochrome 1 (photolyase-like)
mm9_v1_chr14_-_71018208_71018377	0.0832388	PAX2.p2	AF079846|Epb4.9|13829|erythrocyte protein band 4.9	AF155547|Epb4.9|13829|erythrocyte protein band 4.9	BC037021|Epb4.9|13829|erythrocyte protein band 4.9
mm9_v1_chr5_+_123157541_123157662	0.0831593	PAX2.p2	NM_011026|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK150351|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK041904|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK163104|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK162498|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	BC002099|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK162820|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	BC005597|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK153427|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AF089751|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AF089752|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251459|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251460|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251461|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251462|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4
mm9_v1_chr11_-_120442448_120442571	0.0831015	PAX2.p2	AK077343|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr2_-_168427037_168427156	0.0830987	PAX2.p2	EU887581|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887587|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887593|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887599|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK083119|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887583|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887585|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887589|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887591|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887595|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887597|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887601|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887603|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037178|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK044489|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr3_+_87329497_87329593	0.0829384	PAX2.p2	NM_001083318|Etv3|27049|ets variant gene 3	NM_012051|Etv3|27049|ets variant gene 3	AF218539|Etv3|27049|ets variant gene 3	AK147552|Etv3|27049|ets variant gene 3	AK163509|Etv3|27049|ets variant gene 3	AK155080|Etv3|27049|ets variant gene 3	AK089640|Etv3|27049|ets variant gene 3	AK156824|Etv3|27049|ets variant gene 3	AK155957|Etv3|27049|ets variant gene 3	BC078636|Etv3|27049|ets variant gene 3	BC057151|Etv3|27049|ets variant gene 3
mm9_v1_chr4_+_125939573_125939621	0.0829187	PAX2.p2	AK168518|Trappc3|27096|trafficking protein particle complex 3
mm9_v1_chr10_+_126703317_126703496	0.0828939	PAX2.p2	NM_001190453|Dctn2|69654|dynactin 2	NM_001190454|Dctn2|69654|dynactin 2	NM_027151|Dctn2|69654|dynactin 2	AK081785|Dctn2|69654|dynactin 2	AK054390|Dctn2|69654|dynactin 2	AK164021|Dctn2|69654|dynactin 2	AK144464|Dctn2|69654|dynactin 2	AK144505|Dctn2|69654|dynactin 2	BC004613|Dctn2|69654|dynactin 2
mm9_v1_chr17_+_26852700_26852741	0.0827021	PAX2.p2	BC113191|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	BC113192|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr11_-_95171521_95171560	0.0826617	PAX2.p2	AK078483|Myst2|217127|MYST histone acetyltransferase 2	AK166915|Myst2|217127|MYST histone acetyltransferase 2	NM_001195003|Myst2|217127|MYST histone acetyltransferase 2	NM_001195004|Myst2|217127|MYST histone acetyltransferase 2	NM_177619|Myst2|217127|MYST histone acetyltransferase 2
mm9_v1_chr1_-_152240082_152240184	0.0825679	PAX2.p2	NM_001077237|BC003331|226499|cDNA sequence BC003331	NM_145511|BC003331|226499|cDNA sequence BC003331
mm9_v1_chr15_+_101974792_101974939	0.0825416	PAX2.p2	X81584|Igfbp6|16012|insulin-like growth factor binding protein 6	BC012723|Igfbp6|16012|insulin-like growth factor binding protein 6	AK157982|Igfbp6|16012|insulin-like growth factor binding protein 6
mm9_v1_chr5_-_92391867_92391880	0.0825147	PAX2.p2	BC023138|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AK078397|Rchy1|68098|ring finger and CHY zinc finger domain containing 1
mm9_v1_chr4_+_137797490_137797591	0.0823543	PAX2.p2	
mm9_v1_chr19_+_5741862_5742203	0.0821996	PAX2.p2	L40459|Ltbp3|16998|latent transforming growth factor beta binding protein 3	BC127051|Ltbp3|16998|latent transforming growth factor beta binding protein 3
mm9_v1_chr11_+_116976475_116976498	0.0821974	PAX2.p2	AK047396|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166506|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166507|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_028777|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)
mm9_v1_chr2_-_25080099_25080153	0.0821745	PAX2.p2	BC005547|Tubb2c|227613|tubulin, beta 2C
mm9_v1_chr15_-_81846328_81846578	0.0820356	PAX2.p2	AK189878|Pppde2|28075|PPPDE peptidase domain containing 2	BC071205|Pppde2|28075|PPPDE peptidase domain containing 2	BC131979|Pppde2|28075|PPPDE peptidase domain containing 2	BC132642|Pppde2|28075|PPPDE peptidase domain containing 2	BC145235|Pppde2|28075|PPPDE peptidase domain containing 2	AK016347|Pppde2|28075|PPPDE peptidase domain containing 2	AK131703|Pppde2|28075|PPPDE peptidase domain containing 2	AK005963|Pppde2|28075|PPPDE peptidase domain containing 2	AK005706|Pppde2|28075|PPPDE peptidase domain containing 2	BC056972|Pppde2|28075|PPPDE peptidase domain containing 2	NM_134095|Pppde2|28075|PPPDE peptidase domain containing 2
mm9_v1_chr16_-_23520662_23520727	0.0817026	PAX2.p2	BC131637|Masp1|17174|mannan-binding lectin serine peptidase 1	BC131638|Masp1|17174|mannan-binding lectin serine peptidase 1	NM_008555|Masp1|17174|mannan-binding lectin serine peptidase 1	AK032944|Masp1|17174|mannan-binding lectin serine peptidase 1	AB049755|Masp1|17174|mannan-binding lectin serine peptidase 1	D16492|Masp1|17174|mannan-binding lectin serine peptidase 1	AK043055|Masp1|17174|mannan-binding lectin serine peptidase 1	AK031598|Masp1|17174|mannan-binding lectin serine peptidase 1
mm9_v1_chr15_-_83936183_83936238	0.0815519	PAX2.p2	BC054757|Sult4a1|29859|sulfotransferase family 4A, member 1	NM_013873|Sult4a1|29859|sulfotransferase family 4A, member 1
mm9_v1_chr19_+_45063750_45063833	0.0814805	PAX2.p2	AK039355|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	BC054532|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	AK173219|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	AF134918|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	NM_011976|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm9_v1_chr1_-_10027971_10028048	0.0813368	PAX2.p2	AF065386|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	NM_013715|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	BC046753|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AF068223|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	U70736|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK133073|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK002761|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK005728|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK151492|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK005113|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK012499|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK146271|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)
mm9_v1_chr11_+_100181296_100181331	0.0812273	PAX2.p2	AK150813|Eif1|20918|eukaryotic translation initiation factor 1	AK151575|Eif1|20918|eukaryotic translation initiation factor 1	AK152194|Eif1|20918|eukaryotic translation initiation factor 1	AK169763|Eif1|20918|eukaryotic translation initiation factor 1	AK148032|Eif1|20918|eukaryotic translation initiation factor 1	AK151070|Eif1|20918|eukaryotic translation initiation factor 1	BC003463|Eif1|20918|eukaryotic translation initiation factor 1	NM_011508|Eif1|20918|eukaryotic translation initiation factor 1	BC081429|Eif1|20918|eukaryotic translation initiation factor 1	AF129888|Eif1|20918|eukaryotic translation initiation factor 1	BC010791|Eif1|20918|eukaryotic translation initiation factor 1	BC096691|Eif1|20918|eukaryotic translation initiation factor 1	BC096656|Eif1|20918|eukaryotic translation initiation factor 1
mm9_v1_chr9_-_113617224_113617390	0.0810816	PAX2.p2	AJ005073|Pdcd6ip|18571|programmed cell death 6 interacting protein	AJ005074|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC051123|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC026823|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK167574|Pdcd6ip|18571|programmed cell death 6 interacting protein	AF119955|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK029827|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK129340|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK147736|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK031256|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK033943|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK145893|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK169704|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164677|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164678|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_011052|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr18_+_53335914_53335980	0.0810052	PAX2.p2	AK145840|Snx2|67804|sorting nexin 2
mm9_v1_chr8_-_86222963_86223117	0.0799575	PAX2.p2	AK134792|Pkn1|320795|protein kinase N1	BC052923|Pkn1|320795|protein kinase N1	NM_177262|Pkn1|320795|protein kinase N1	AK170556|Pkn1|320795|protein kinase N1	AK050643|Pkn1|320795|protein kinase N1
mm9_v1_chr16_-_20425991_20426058	0.0796804	PAX2.p2	AK050565|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr4_+_140924106_140924134	0.0792545	PAX2.p2	BC147048|Fam131c|277743|family with sequence similarity 131, member C	BC147049|Fam131c|277743|family with sequence similarity 131, member C	NM_001085513|Fam131c|277743|family with sequence similarity 131, member C
mm9_v1_chr16_+_29579427_29579538	0.0791278	PAX2.p2	AB044138|Opa1|74143|optic atrophy 1 homolog (human)	NM_133752|Opa1|74143|optic atrophy 1 homolog (human)	AK029157|Opa1|74143|optic atrophy 1 homolog (human)	AK053861|Opa1|74143|optic atrophy 1 homolog (human)	AK004715|Opa1|74143|optic atrophy 1 homolog (human)	AK030835|Opa1|74143|optic atrophy 1 homolog (human)	AK145620|Opa1|74143|optic atrophy 1 homolog (human)	AK038446|Opa1|74143|optic atrophy 1 homolog (human)	BC052704|Opa1|74143|optic atrophy 1 homolog (human)	AK050383|Opa1|74143|optic atrophy 1 homolog (human)	AK164872|Opa1|74143|optic atrophy 1 homolog (human)	AK044657|Opa1|74143|optic atrophy 1 homolog (human)	BC138665|Opa1|74143|optic atrophy 1 homolog (human)	BC145959|Opa1|74143|optic atrophy 1 homolog (human)
mm9_v1_chr11_+_120534337_120534436	0.0785968	PAX2.p2	BC022115|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	BC019177|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	BC031153|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	AY349133|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	AK088197|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm9_v1_chr4_+_42962733_42962813	0.0785408	PAX2.p2	AK158535|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5	AF321322|Dnajb5|56323|DnaJ (Hsp40) homolog, subfamily B, member 5
mm9_v1_chr3_+_51219971_51220063	0.0784426	PAX2.p2	AF510858|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	BC050017|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm9_v1_chr8_+_87213145_87213176	0.0783572	PAX2.p2	NM_001164559|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	NM_001164560|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	NM_198020|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	BC027404|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr16_-_42340613_42340763	0.0781778	PAX2.p2	AK031908|Gap43|14432|growth associated protein 43	BC080758|Gap43|14432|growth associated protein 43	BC028288|Gap43|14432|growth associated protein 43	NM_008083|Gap43|14432|growth associated protein 43
mm9_v1_chr2_-_154233754_154233847	0.0780934	PAX2.p2	BC018546|Snta1|20648|syntrophin, acidic 1	U00677|Snta1|20648|syntrophin, acidic 1	AK137379|Snta1|20648|syntrophin, acidic 1	NM_009228|Snta1|20648|syntrophin, acidic 1
mm9_v1_chr2_+_140221224_140221330	0.0780343	PAX2.p2	BC038317|Macrod2|72899|MACRO domain containing 2	BC027552|Macrod2|72899|MACRO domain containing 2	BC028443|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr5_-_121641282_121641449	0.0780037	PAX2.p2	D84372|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC057398|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC028513|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK011468|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK147354|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC059278|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159501|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159587|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_001109992|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_011202|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11
mm9_v1_chr6_+_83745021_83745052	0.0777247	PAX2.p2	AK007240|Nagk|56174|N-acetylglucosamine kinase	AK084646|Nagk|56174|N-acetylglucosamine kinase	AJ242909|Nagk|56174|N-acetylglucosamine kinase	NM_019542|Nagk|56174|N-acetylglucosamine kinase	AK089238|Nagk|56174|N-acetylglucosamine kinase
mm9_v1_chr12_-_112127299_112127357	0.0775517	PAX2.p2	BC021867|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK004355|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK076126|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK160662|Cinp|67236|cyclin-dependent kinase 2 interacting protein	NM_026048|Cinp|67236|cyclin-dependent kinase 2 interacting protein	BC011066|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK007812|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK032155|Cinp|67236|cyclin-dependent kinase 2 interacting protein
mm9_v1_chr2_+_22478062_22478110	0.0775501	PAX2.p2	AK141473|Gad2|14417|glutamic acid decarboxylase 2	L16980|Gad2|14417|glutamic acid decarboxylase 2
mm9_v1_chr8_+_32200076_32200146	0.0774106	PAX2.p2	AK009781|Dusp26|66959|dual specificity phosphatase 26 (putative)	NM_025869|Dusp26|66959|dual specificity phosphatase 26 (putative)
mm9_v1_chr18_+_45719464_45719553	0.0773135	PAX2.p2	AK087908|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK050390|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
mm9_v1_chr2_+_145686377_145686454	0.0770392	PAX2.p2	AK014548|Rin2|74030|Ras and Rab interactor 2	AK040763|Rin2|74030|Ras and Rab interactor 2	AK152025|Rin2|74030|Ras and Rab interactor 2	BC005529|Rin2|74030|Ras and Rab interactor 2	AK154421|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr5_-_45841351_45841377	0.0767598	PAX2.p2	AK161660|Qdpr|110391|quinoid dihydropteridine reductase
mm9_v1_chr9_+_21807887_21807962	0.0767077	PAX2.p2	AK203731|Prkcsh|19089|protein kinase C substrate 80K-H
mm9_v1_chr10_-_41996462_41996560	0.0766166	PAX2.p2	AK047413|Foxo3|56484|forkhead box O3	AK139629|Foxo3|56484|forkhead box O3	AF114259|Foxo3|56484|forkhead box O3	NM_019740|Foxo3|56484|forkhead box O3	AK143198|Foxo3|56484|forkhead box O3
mm9_v1_chr16_-_18248659_18248687	0.0765967	PAX2.p2	L25255|Ranbp1|19385|RAN binding protein 1
mm9_v1_chr12_+_16660245_16660299	0.0765032	PAX2.p2	AK158943|Ntsr2|18217|neurotensin receptor 2	NM_008747|Ntsr2|18217|neurotensin receptor 2	U51908|Ntsr2|18217|neurotensin receptor 2	BC141019|Ntsr2|18217|neurotensin receptor 2	AB041826|Ntsr2|18217|neurotensin receptor 2	AB041827|Ntsr2|18217|neurotensin receptor 2
mm9_v1_chr13_+_99033030_99033273	0.0763617	PAX2.p2	AK161446|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	AK171682|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	AK037263|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	AK003438|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	BC028323|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	BC037437|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	AK081695|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	AK139343|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	BC059723|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	AF314031|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	NM_023472|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	BC079615|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2	AK054037|Ankra2|68558|ankyrin repeat, family A (RFXANK-like), 2
mm9_v1_chr5_+_73684200_73684212	0.0759836	PAX2.p2	AK181231|Ociad1|68095|OCIA domain containing 1	AK217055|Ociad1|68095|OCIA domain containing 1
mm9_v1_chr11_-_8368505_8368528	0.0759301	PAX2.p2	AK158101|Tns3|319939|tensin 3
mm9_v1_chr8_-_87296172_87296219	0.0758937	PAX2.p2	S81451|Nfix|18032|nuclear factor I/X
mm9_v1_chr10_+_39452169_39452280	0.0757665	PAX2.p2	AF083464|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	AF083465|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm9_v1_chr19_-_6984541_6984611	0.0746282	PAX2.p2	AK009858|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr8_+_4166681_4166734	0.0746174	PAX2.p2	AK193949|Evi5l|213027|ecotropic viral integration site 5 like
mm9_v1_chr5_-_31505192_31505291	0.0742313	PAX2.p2	
mm9_v1_chr9_-_42280256_42280323	0.074193	PAX2.p2	BC139386|Tbcel|272589|tubulin folding cofactor E-like	BC139387|Tbcel|272589|tubulin folding cofactor E-like	AK077017|Tbcel|272589|tubulin folding cofactor E-like	NM_173038|Tbcel|272589|tubulin folding cofactor E-like	AK084854|Tbcel|272589|tubulin folding cofactor E-like
mm9_v1_chr6_-_115625875_115625915	0.07372	PAX2.p2	AB057663|Raf1|110157|v-raf-leukemia viral oncogene 1	AB077145|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr3_-_103594950_103595238	0.0736155	PAX2.p2	BC145697|Hipk1|15257|homeodomain interacting protein kinase 1	BC145699|Hipk1|15257|homeodomain interacting protein kinase 1	AF170303|Hipk1|15257|homeodomain interacting protein kinase 1	AF170304|Hipk1|15257|homeodomain interacting protein kinase 1	AF077658|Hipk1|15257|homeodomain interacting protein kinase 1	AK134408|Hipk1|15257|homeodomain interacting protein kinase 1	NM_010432|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr7_+_19791687_19791691	0.0735505	PAX2.p2	AK215580|Eml2|72205|echinoderm microtubule associated protein like 2
mm9_v1_chr9_+_53149188_53149418	0.0734752	PAX2.p2	AK046924|Exph5|320051|exophilin 5	AK044881|Exph5|320051|exophilin 5
mm9_v1_chr4_+_122513481_122513506	0.0734679	PAX2.p2	AK151107|Ppt1|19063|palmitoyl-protein thioesterase 1	AK152940|Ppt1|19063|palmitoyl-protein thioesterase 1	NM_008917|Ppt1|19063|palmitoyl-protein thioesterase 1	AK152474|Ppt1|19063|palmitoyl-protein thioesterase 1	AK014561|Ppt1|19063|palmitoyl-protein thioesterase 1	AK153106|Ppt1|19063|palmitoyl-protein thioesterase 1	AK153316|Ppt1|19063|palmitoyl-protein thioesterase 1	AK171668|Ppt1|19063|palmitoyl-protein thioesterase 1	AF087568|Ppt1|19063|palmitoyl-protein thioesterase 1	AK169658|Ppt1|19063|palmitoyl-protein thioesterase 1	AK151055|Ppt1|19063|palmitoyl-protein thioesterase 1	AK148314|Ppt1|19063|palmitoyl-protein thioesterase 1	AF326557|Ppt1|19063|palmitoyl-protein thioesterase 1	AF326558|Ppt1|19063|palmitoyl-protein thioesterase 1	AK169579|Ppt1|19063|palmitoyl-protein thioesterase 1
mm9_v1_chr4_-_24778203_24778245	0.0731185	PAX2.p2	AK134944|Klhl32|212390|kelch-like 32 (Drosophila)	NM_001033531|Klhl32|212390|kelch-like 32 (Drosophila)	NM_001163020|Klhl32|212390|kelch-like 32 (Drosophila)
mm9_v1_chr6_+_121014481_121014613	0.0730432	PAX2.p2	AK085340|Gm4651|100043793|predicted gene 4651
mm9_v1_chr8_+_108703203_108703313	0.0730287	PAX2.p2	
mm9_v1_chr12_+_3572390_3572542	0.0729979	PAX2.p2	NM_001162465|Dtnb|13528|dystrobrevin, beta	AK043436|Dtnb|13528|dystrobrevin, beta	AK157158|Dtnb|13528|dystrobrevin, beta	AK083752|Dtnb|13528|dystrobrevin, beta	AK085675|Dtnb|13528|dystrobrevin, beta	AJ003007|Dtnb|13528|dystrobrevin, beta
mm9_v1_chr15_+_79059802_79059887	0.0726153	PAX2.p2	NM_001045558|Pick1|18693|protein interacting with C kinase 1	AK090155|Pick1|18693|protein interacting with C kinase 1	AK050224|Pick1|18693|protein interacting with C kinase 1	BC023088|Pick1|18693|protein interacting with C kinase 1	BC048788|Pick1|18693|protein interacting with C kinase 1	AK162724|Pick1|18693|protein interacting with C kinase 1
mm9_v1_chr5_+_3344201_3344322	0.0724963	PAX2.p2	AK078973|Cdk6|12571|cyclin-dependent kinase 6	AF132483|Cdk6|12571|cyclin-dependent kinase 6	NM_009873|Cdk6|12571|cyclin-dependent kinase 6	BC119360|Cdk6|12571|cyclin-dependent kinase 6	BC120595|Cdk6|12571|cyclin-dependent kinase 6
mm9_v1_chr9_-_77392505_77392711	0.0724299	PAX2.p2	BC087542|Lrrc1|214345|leucine rich repeat containing 1	AK079854|Lrrc1|214345|leucine rich repeat containing 1	BC046591|Lrrc1|214345|leucine rich repeat containing 1	AK051043|Lrrc1|214345|leucine rich repeat containing 1	AK147075|Lrrc1|214345|leucine rich repeat containing 1	NM_001146048|Lrrc1|214345|leucine rich repeat containing 1	AK220166|Lrrc1|214345|leucine rich repeat containing 1
mm9_v1_chr2_+_156547014_156547227	0.0723243	PAX2.p2	NM_001042487|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	BC085475|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)
mm9_v1_chr2_+_181287207_181287250	0.0722234	PAX2.p2	AK135001|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5
mm9_v1_chr3_+_106524842_106524867	0.0722056	PAX2.p2	AK156488|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	AK008209|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	AK141379|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	BC117763|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	BC117764|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	AK048030|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	BC094643|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene
mm9_v1_chr4_+_15193231_15193387	0.0720893	PAX2.p2	AK170682|Tmem64|100201|transmembrane protein 64	AK035894|Tmem64|100201|transmembrane protein 64	AK169861|Tmem64|100201|transmembrane protein 64
mm9_v1_chr10_+_59754384_59754499	0.0720419	PAX2.p2	AK159622|Psap|19156|prosaposin	AK210181|Psap|19156|prosaposin	BC036266|Psap|19156|prosaposin	AK180106|Psap|19156|prosaposin	AK194829|Psap|19156|prosaposin	AK197804|Psap|19156|prosaposin	AK201095|Psap|19156|prosaposin	AK203509|Psap|19156|prosaposin
mm9_v1_chr3_+_106524599_106524599	0.0718416	PAX2.p2	AK030201|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	NM_001039488|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	NM_028081|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene
mm9_v1_chr7_-_135381486_135381579	0.0717733	PAX2.p2	AK033604|9130023H24Rik|100043133|RIKEN cDNA 9130023H24 gene	AK084086|9130023H24Rik|100043133|RIKEN cDNA 9130023H24 gene	NM_177001|9130023H24Rik|100043133|RIKEN cDNA 9130023H24 gene
mm9_v1_chr14_-_56503083_56503107	0.071763	PAX2.p2	BC065108|Cbln3|56410|cerebellin 3 precursor protein	NM_019820|Cbln3|56410|cerebellin 3 precursor protein
mm9_v1_chrM_+_1550_2087	0.0717457	PAX2.p2	
mm9_v1_chr6_-_52176102_52176188	0.0713553	PAX2.p2	AB221551|Hoxa9|15405|homeobox A9	BC055059|Hoxa9|15405|homeobox A9
mm9_v1_chr12_-_76836549_76836721	0.0711629	PAX2.p2	AF415215|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	BC037592|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	BC026814|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	AF247177|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	AK154116|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	AK043586|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	AK149860|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1	NM_030750|Sgpp1|81535|sphingosine-1-phosphate phosphatase 1
mm9_v1_chr9_+_111174321_111174442	0.0710252	PAX2.p2	BC018474|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	NM_175266|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK032284|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK043518|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK030084|Epm2aip1|77781|EPM2A (laforin) interacting protein 1
mm9_v1_chr4_-_62021451_62021510	0.0708811	PAX2.p2	AK161169|Fkbp15|338355|FK506 binding protein 15	BC060651|Fkbp15|338355|FK506 binding protein 15	AK049476|Fkbp15|338355|FK506 binding protein 15	AK161705|Fkbp15|338355|FK506 binding protein 15
mm9_v1_chr9_-_4309446_4309517	0.070837	PAX2.p2	AK013111|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK076099|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK010557|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK028700|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC038013|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC049851|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK008554|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC030043|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK144671|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK076866|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK014188|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK029523|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK081818|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK031766|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK088977|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK007737|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	NM_026276|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
mm9_v1_chr12_-_99497634_99497668	0.0707941	PAX2.p2	AK154760|Galc|14420|galactosylceramidase
mm9_v1_chrX_+_100551808_100551914	0.0707703	PAX2.p2	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr3_+_157610182_157610429	0.0707022	PAX2.p2	AK135906|Ankrd13c|433667|ankyrin repeat domain 13c	AK157542|Ankrd13c|433667|ankyrin repeat domain 13c	BC065088|Ankrd13c|433667|ankyrin repeat domain 13c	BC138991|Ankrd13c|433667|ankyrin repeat domain 13c	BC138992|Ankrd13c|433667|ankyrin repeat domain 13c	NM_001013806|Ankrd13c|433667|ankyrin repeat domain 13c
mm9_v1_chr11_+_78139476_78139615	0.0706921	PAX2.p2	AJ132391|Aldoc|11676|aldolase C, fructose-bisphosphate
mm9_v1_chr10_-_126626878_126627109	0.0706261	PAX2.p2	AK158684|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	NM_001166413|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	AF487515|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	AK010452|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	BC041113|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	NM_028027|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25
mm9_v1_chr2_+_32143868_32143875	0.0705973	PAX2.p2	BC011407|Golga2|99412|golgi autoantigen, golgin subfamily a, 2
mm9_v1_chr5_+_136363810_136363893	0.0703664	PAX2.p2	BC018257|Hspb1|15507|heat shock protein 1	AK003119|Hspb1|15507|heat shock protein 1	AK168927|Hspb1|15507|heat shock protein 1	AK010663|Hspb1|15507|heat shock protein 1	X14686|Hspb1|15507|heat shock protein 1	BC090388|Hspb1|15507|heat shock protein 1	BC099463|Hspb1|15507|heat shock protein 1
mm9_v1_chr7_+_114738564_114738564	0.0701582	PAX2.p2	NM_008905|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm9_v1_chr4_-_132440285_132440436	0.0699171	PAX2.p2	AK167087|Stx12|100226|syntaxin 12	AB019211|Stx12|100226|syntaxin 12	AK168753|Stx12|100226|syntaxin 12	AK078948|Stx12|100226|syntaxin 12	AK132618|Stx12|100226|syntaxin 12	AK167804|Stx12|100226|syntaxin 12	BC010669|Stx12|100226|syntaxin 12	AK076390|Stx12|100226|syntaxin 12	AK146735|Stx12|100226|syntaxin 12	AK077678|Stx12|100226|syntaxin 12	NM_133887|Stx12|100226|syntaxin 12	AK146544|Stx12|100226|syntaxin 12	AK170203|Stx12|100226|syntaxin 12
mm9_v1_chr7_-_106289639_106289648	0.0696884	PAX2.p2	AK165015|Uvrag|78610|UV radiation resistance associated gene	AK078085|Uvrag|78610|UV radiation resistance associated gene
mm9_v1_chr4_+_120527397_120527477	0.0694878	PAX2.p2	AK047745|Rims3|242662|regulating synaptic membrane exocytosis 3	AK043152|Rims3|242662|regulating synaptic membrane exocytosis 3
mm9_v1_chr2_-_12223518_12223578	0.0694749	PAX2.p2	BC137793|Itga8|241226|integrin alpha 8	AK135193|Itga8|241226|integrin alpha 8	AK044910|Itga8|241226|integrin alpha 8	NM_001001309|Itga8|241226|integrin alpha 8
mm9_v1_chr7_+_112788953_112788961	0.0693863	PAX2.p2	AK010994|Fxc1|14356|fractured callus expressed transcript 1
mm9_v1_chr2_-_25080180_25080221	0.0691499	PAX2.p2	NM_146116|Tubb2c|227613|tubulin, beta 2C
mm9_v1_chr5_+_35399461_35399583	0.069057	PAX2.p2	AK170454|Dok7|231134|docking protein 7	BC089590|Dok7|231134|docking protein 7	AB220919|Dok7|231134|docking protein 7
mm9_v1_chr11_+_116976506_116976598	0.0689942	PAX2.p2	BC005766|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	BC086620|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	AK004818|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	BC055849|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)
mm9_v1_chr5_-_143942408_143942453	0.0687405	PAX2.p2	AF226870|Rbak|57782|RB-associated KRAB repressor	NM_001045482|Rbak|57782|RB-associated KRAB repressor	NM_021326|Rbak|57782|RB-associated KRAB repressor	AK051009|Rbak|57782|RB-associated KRAB repressor
mm9_v1_chr7_+_17460662_17460665	0.0686172	PAX2.p2	DQ832319|Dact3|629378|dapper homolog 3, antagonist of beta-catenin (xenopus)	NM_001081655|Dact3|629378|dapper homolog 3, antagonist of beta-catenin (xenopus)
mm9_v1_chr7_+_30906952_30907031	0.0685571	PAX2.p2	NM_001081007|Zfp382|233060|zinc finger protein 382	AK134263|Zfp382|233060|zinc finger protein 382	BC151163|Zfp382|233060|zinc finger protein 382
mm9_v1_chr15_+_99556048_99556119	0.0683569	PAX2.p2	NM_183256|2310016M24Rik|66379|RIKEN cDNA 2310016M24 gene	AK009401|2310016M24Rik|66379|RIKEN cDNA 2310016M24 gene	BC059905|2310016M24Rik|66379|RIKEN cDNA 2310016M24 gene
mm9_v1_chr7_+_141862336_141862393	0.0683316	PAX2.p2	AK163853|Dock1|330662|dedicator of cytokinesis 1	NM_001033420|Dock1|330662|dedicator of cytokinesis 1	AK147836|Dock1|330662|dedicator of cytokinesis 1	AK082835|Dock1|330662|dedicator of cytokinesis 1	AK141224|Dock1|330662|dedicator of cytokinesis 1	AK164963|Dock1|330662|dedicator of cytokinesis 1
mm9_v1_chr5_+_130647678_130647743	0.0680048	PAX2.p2	NM_001199059|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	AF093590|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	AK146734|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr1_-_174221511_174221528	0.0680009	PAX2.p2	BC041774|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide
mm9_v1_chr6_-_142456402_142456478	0.067651	PAX2.p2	X51905|Ldhb|16832|lactate dehydrogenase B	AK002257|Ldhb|16832|lactate dehydrogenase B	BC087888|Ldhb|16832|lactate dehydrogenase B	BC046755|Ldhb|16832|lactate dehydrogenase B	NM_008492|Ldhb|16832|lactate dehydrogenase B	AK131637|Ldhb|16832|lactate dehydrogenase B	AK019391|Ldhb|16832|lactate dehydrogenase B
mm9_v1_chr17_+_47748530_47748580	0.0675859	PAX2.p2	AK041624|Med20|56771|mediator complex subunit 20	AK019130|Med20|56771|mediator complex subunit 20	AK043396|Med20|56771|mediator complex subunit 20	AK146345|Med20|56771|mediator complex subunit 20	NM_020048|Med20|56771|mediator complex subunit 20	AK031504|Med20|56771|mediator complex subunit 20	BC060122|Med20|56771|mediator complex subunit 20	AK141369|Med20|56771|mediator complex subunit 20	AJ245617|Med20|56771|mediator complex subunit 20
mm9_v1_chr10_+_61154744_61154819	0.0674834	PAX2.p2	
mm9_v1_chr10_-_86164623_86164759	0.0671929	PAX2.p2	AK031918|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK160827|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215377|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215142|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210698|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210697|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK205935|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK216702|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK218021|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK186620|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chr11_-_6100453_6100453	0.0671434	PAX2.p2	NM_173748|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr15_-_95485136_95485201	0.0671375	PAX2.p2	AK034882|Dbx2|223843|developing brain homeobox 2	NM_207533|Dbx2|223843|developing brain homeobox 2
mm9_v1_chr11_-_113427050_113427128	0.0666307	PAX2.p2	AK192534|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK007986|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK170673|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK049368|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK036999|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	BC019647|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	BC031751|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	NM_001166503|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	NM_027216|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11
mm9_v1_chr18_+_56732519_56732526	0.0663291	PAX2.p2	NM_019996|Phax|56698|phosphorylated adaptor for RNA export
mm9_v1_chr11_-_69828831_69828933	0.0661938	PAX2.p2	Z71189|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain	AK076037|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain	BC026559|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain	NM_017366|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain
mm9_v1_chr15_+_99421458_99421594	0.0660039	PAX2.p2	NM_009701|Aqp5|11830|aquaporin 5	AK009302|Aqp5|11830|aquaporin 5	AK004736|Aqp5|11830|aquaporin 5
mm9_v1_chr5_+_14514906_14514924	0.065901	PAX2.p2	NM_001110796|Pclo|26875|piccolo (presynaptic cytomatrix protein)	NM_011995|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19185|Pclo|26875|piccolo (presynaptic cytomatrix protein)	Y19186|Pclo|26875|piccolo (presynaptic cytomatrix protein)
mm9_v1_chr7_-_134351860_134352145	0.0653708	PAX2.p2	AK047320|Tbc1d10b|68449|TBC1 domain family, member 10b	AK047327|Tbc1d10b|68449|TBC1 domain family, member 10b	NM_144522|Tbc1d10b|68449|TBC1 domain family, member 10b
mm9_v1_chr2_+_121282841_121282867	0.0652166	PAX2.p2	AK168506|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	BC021588|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene
mm9_v1_chr11_+_115048783_115048880	0.0647966	PAX2.p2	NM_001033393|Tmem104|320534|transmembrane protein 104	AK171314|Tmem104|320534|transmembrane protein 104	AK155041|Tmem104|320534|transmembrane protein 104	AK040894|Tmem104|320534|transmembrane protein 104	AK171457|Tmem104|320534|transmembrane protein 104	AK167098|Tmem104|320534|transmembrane protein 104	AK049868|Tmem104|320534|transmembrane protein 104	BC140976|Tmem104|320534|transmembrane protein 104
mm9_v1_chr10_-_57252251_57252251	0.0646785	PAX2.p2	AK135359|Serinc1|56442|serine incorporator 1
mm9_v1_chr9_-_8134293_8134451	0.0643766	PAX2.p2	BC119072|AK129341|234915|cDNA sequence AK129341	BC120489|AK129341|234915|cDNA sequence AK129341	NM_001045524|AK129341|234915|cDNA sequence AK129341
mm9_v1_chr15_+_3229159_3229218	0.0641022	PAX2.p2	AK183252|Sepp1|20363|selenoprotein P, plasma, 1	AK190256|Sepp1|20363|selenoprotein P, plasma, 1	AK199458|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr1_+_173200454_173200531	0.063947	PAX2.p2	NM_020579|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	AK155471|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	BC013619|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	BC004095|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	BC021830|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3	AF142671|B4galt3|57370|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
mm9_v1_chr11_-_43496158_43496178	0.063876	PAX2.p2	
mm9_v1_chr11_-_68200284_68200327	0.063765	PAX2.p2	NM_008744|Ntn1|18208|netrin 1
mm9_v1_chr4_+_43394824_43394863	0.0632785	PAX2.p2	NM_001037709|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr19_+_5637459_5637550	0.0631452	PAX2.p2	AK155321|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK158072|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	BC094053|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	NM_009045|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr5_-_144266956_144266980	0.0631204	PAX2.p2	
mm9_v1_chr12_+_30213224_30213265	0.0629146	PAX2.p2	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr9_+_44048756_44048763	0.0627022	PAX2.p2	NM_001081369|Ccdc153|270150|coiled-coil domain containing 153
mm9_v1_chr1_+_64579559_64579575	0.0625984	PAX2.p2	AK044992|Creb1|12912|cAMP responsive element binding protein 1	AK044993|Creb1|12912|cAMP responsive element binding protein 1
mm9_v1_chr8_-_125135240_125135386	0.0624156	PAX2.p2	BC004002|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK220245|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK033946|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AF111346|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	AK159592|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	NM_001193645|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase	NM_016722|Galns|50917|galactosamine (N-acetyl)-6-sulfate sulfatase
mm9_v1_chr15_+_80808238_80808277	0.0623494	PAX2.p2	AY382616|Sgsm3|105835|small G protein signaling modulator 3	AK166391|Sgsm3|105835|small G protein signaling modulator 3	AK164757|Sgsm3|105835|small G protein signaling modulator 3	BC025561|Sgsm3|105835|small G protein signaling modulator 3
mm9_v1_chr1_-_58558259_58558259	0.0622893	PAX2.p2	AB190256|Orc2|18393|origin recognition complex, subunit 2	NM_001025378|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr4_-_151401740_151401801	0.062268	PAX2.p2	BC005515|Zbtb48|100090|zinc finger and BTB domain containing 48	AK027912|Zbtb48|100090|zinc finger and BTB domain containing 48	NM_133879|Zbtb48|100090|zinc finger and BTB domain containing 48
mm9_v1_chr5_+_147760198_147760451	0.0621235	PAX2.p2	NM_025652|Gtf3a|66596|general transcription factor III A	AF391799|Gtf3a|66596|general transcription factor III A	AK008247|Gtf3a|66596|general transcription factor III A	AK011845|Gtf3a|66596|general transcription factor III A	AK143627|Gtf3a|66596|general transcription factor III A	AK012797|Gtf3a|66596|general transcription factor III A	AK017234|Gtf3a|66596|general transcription factor III A	AK183221|Gtf3a|66596|general transcription factor III A
mm9_v1_chr5_+_117864837_117864837	0.0620982	PAX2.p2	DQ531035|Ksr2|333050|kinase suppressor of ras 2	NM_001114545|Ksr2|333050|kinase suppressor of ras 2
mm9_v1_chr15_+_34012606_34012790	0.0619991	PAX2.p2	BC138858|Mtdh|67154|metadherin	BC138859|Mtdh|67154|metadherin	BC036994|Mtdh|67154|metadherin	AY553638|Mtdh|67154|metadherin
mm9_v1_chr11_+_6315729_6315787	0.0618988	PAX2.p2	AK151583|Ppia|268373|peptidylprolyl isomerase A
mm9_v1_chr19_-_14671832_14671910	0.0615698	PAX2.p2	AF229633|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr2_-_112208115_112208198	0.0613856	PAX2.p2	AK167745|Tmem85|68032|transmembrane protein 85	BC051926|Tmem85|68032|transmembrane protein 85	AK003668|Tmem85|68032|transmembrane protein 85	AK012047|Tmem85|68032|transmembrane protein 85	AK078165|Tmem85|68032|transmembrane protein 85	NM_026519|Tmem85|68032|transmembrane protein 85
mm9_v1_chr10_+_80642285_80642527	0.0612433	PAX2.p2	AK197735|Eef2|13629|eukaryotic translation elongation factor 2	AK181350|Eef2|13629|eukaryotic translation elongation factor 2	AK179706|Eef2|13629|eukaryotic translation elongation factor 2	AK180098|Eef2|13629|eukaryotic translation elongation factor 2	AK187232|Eef2|13629|eukaryotic translation elongation factor 2	AK187739|Eef2|13629|eukaryotic translation elongation factor 2	AK188630|Eef2|13629|eukaryotic translation elongation factor 2	AK192640|Eef2|13629|eukaryotic translation elongation factor 2	AK196185|Eef2|13629|eukaryotic translation elongation factor 2	AK198959|Eef2|13629|eukaryotic translation elongation factor 2	AK199367|Eef2|13629|eukaryotic translation elongation factor 2	AK204209|Eef2|13629|eukaryotic translation elongation factor 2	AK205796|Eef2|13629|eukaryotic translation elongation factor 2	AK212960|Eef2|13629|eukaryotic translation elongation factor 2	AK215832|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr8_+_128822478_128822500	0.0606614	PAX2.p2	NM_175434|Slc35f3|210027|solute carrier family 35, member F3	AK046359|Slc35f3|210027|solute carrier family 35, member F3
mm9_v1_chr10_-_114688480_114688548	0.0604576	PAX2.p2	AK014477|Tbc1d15|66687|TBC1 domain family, member 15	AK078875|Tbc1d15|66687|TBC1 domain family, member 15	AK147085|Tbc1d15|66687|TBC1 domain family, member 15	BC053395|Tbc1d15|66687|TBC1 domain family, member 15	NM_025706|Tbc1d15|66687|TBC1 domain family, member 15
mm9_v1_chr17_-_24278482_24278583	0.0600425	PAX2.p2	AK165564|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AF126294|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK149162|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	BC146001|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	BC146003|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AF079535|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK149289|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AF086625|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK162677|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK143283|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK147835|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK147149|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	NM_001080773|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	NM_011062|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1
mm9_v1_chr9_-_87150351_87150370	0.0598094	PAX2.p2	AK163175|4922501C03Rik|382090|RIKEN cDNA 4922501C03 gene	AK135482|4922501C03Rik|382090|RIKEN cDNA 4922501C03 gene	NM_199316|4922501C03Rik|382090|RIKEN cDNA 4922501C03 gene	AK019554|4922501C03Rik|382090|RIKEN cDNA 4922501C03 gene
mm9_v1_chr9_-_90009416_90009657	0.0598073	PAX2.p2	AK167079|Morf4l1|21761|mortality factor 4 like 1	AK164251|Morf4l1|21761|mortality factor 4 like 1	AK010528|Morf4l1|21761|mortality factor 4 like 1	AK011441|Morf4l1|21761|mortality factor 4 like 1	AK182816|Morf4l1|21761|mortality factor 4 like 1	AK218718|Morf4l1|21761|mortality factor 4 like 1	BC083094|Morf4l1|21761|mortality factor 4 like 1	AK152119|Morf4l1|21761|mortality factor 4 like 1	AK168585|Morf4l1|21761|mortality factor 4 like 1	AK168608|Morf4l1|21761|mortality factor 4 like 1	AK150925|Morf4l1|21761|mortality factor 4 like 1	AK220441|Morf4l1|21761|mortality factor 4 like 1	AK146210|Morf4l1|21761|mortality factor 4 like 1	AK168327|Morf4l1|21761|mortality factor 4 like 1	AK169065|Morf4l1|21761|mortality factor 4 like 1	AK168674|Morf4l1|21761|mortality factor 4 like 1	AB042241|Morf4l1|21761|mortality factor 4 like 1	AF319620|Morf4l1|21761|mortality factor 4 like 1	AF319621|Morf4l1|21761|mortality factor 4 like 1	BC085103|Morf4l1|21761|mortality factor 4 like 1	BC003894|Morf4l1|21761|mortality factor 4 like 1	BC017619|Morf4l1|21761|mortality factor 4 like 1	BC083118|Morf4l1|21761|mortality factor 4 like 1	BC092293|Morf4l1|21761|mortality factor 4 like 1	BC103783|Morf4l1|21761|mortality factor 4 like 1	AK011249|Morf4l1|21761|mortality factor 4 like 1	AK016414|Morf4l1|21761|mortality factor 4 like 1	NM_001039147|Morf4l1|21761|mortality factor 4 like 1	NM_024431|Morf4l1|21761|mortality factor 4 like 1
mm9_v1_chr1_+_16678536_16678588	0.0597754	PAX2.p2	AB018550|Ly96|17087|lymphocyte antigen 96	NM_001159711|Ly96|17087|lymphocyte antigen 96	NM_016923|Ly96|17087|lymphocyte antigen 96	BC116785|Ly96|17087|lymphocyte antigen 96	AF168120|Ly96|17087|lymphocyte antigen 96	AY641431|Ly96|17087|lymphocyte antigen 96
mm9_v1_chr2_+_28048511_28048566	0.0597183	PAX2.p2	D78264|Olfm1|56177|olfactomedin 1	D78265|Olfm1|56177|olfactomedin 1
mm9_v1_chr18_+_31919533_31919621	0.0597012	PAX2.p2	BC056948|Ammecr1l|225339|AMME chromosomal region gene 1-like	NM_153515|Ammecr1l|225339|AMME chromosomal region gene 1-like	AK151257|Ammecr1l|225339|AMME chromosomal region gene 1-like
mm9_v1_chr17_-_10512094_10512209	0.0596993	PAX2.p2	BC053426|Qk|19317|quaking
mm9_v1_chr15_+_82086506_82086614	0.0595229	PAX2.p2	AK005178|1500009C09Rik|76505|RIKEN cDNA 1500009C09 gene	BC023061|1500009C09Rik|76505|RIKEN cDNA 1500009C09 gene	BC094356|1500009C09Rik|76505|RIKEN cDNA 1500009C09 gene
mm9_v1_chr13_+_49516585_49516657	0.0592857	PAX2.p2	AK167467|Ippk|75678|inositol 1,3,4,5,6-pentakisphosphate 2-kinase	AK029085|Ippk|75678|inositol 1,3,4,5,6-pentakisphosphate 2-kinase	AK160092|Ippk|75678|inositol 1,3,4,5,6-pentakisphosphate 2-kinase	BC024630|Ippk|75678|inositol 1,3,4,5,6-pentakisphosphate 2-kinase
mm9_v1_chr11_+_109224275_109224393	0.0592005	PAX2.p2	
mm9_v1_chr5_-_136386463_136386544	0.0590942	PAX2.p2	AK192597|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK208362|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr1_+_78654585_78654623	0.0589406	PAX2.p2	AY316161|Utp14b|195434|UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)
mm9_v1_chr11_-_22185840_22185840	0.0587727	PAX2.p2	AF424697|Ehbp1|216565|EH domain binding protein 1	NM_153078|Ehbp1|216565|EH domain binding protein 1
mm9_v1_chr3_+_90017618_90017636	0.0587229	PAX2.p2	AK083292|Rab13|68328|RAB13, member RAS oncogene family	AK080805|Rab13|68328|RAB13, member RAS oncogene family
mm9_v1_chr5_-_23122181_23122418	0.0584535	PAX2.p2	AB006036|Srpk2|20817|serine/arginine-rich protein specific kinase 2	BC020178|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK136861|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK169580|Srpk2|20817|serine/arginine-rich protein specific kinase 2	NM_009274|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chr5_-_149363989_149364264	0.0583688	PAX2.p2	BC025595|Ubl3|24109|ubiquitin-like 3	AK145952|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr6_-_148894953_148895000	0.0582466	PAX2.p2	BC076599|Fam60a|56306|family with sequence similarity 60, member A	NM_019643|Fam60a|56306|family with sequence similarity 60, member A	AK166569|Fam60a|56306|family with sequence similarity 60, member A	AK145384|Fam60a|56306|family with sequence similarity 60, member A
mm9_v1_chr9_-_69989168_69989278	0.0582074	PAX2.p2	AK046408|Fam81a|76886|family with sequence similarity 81, member A
mm9_v1_chr2_+_169458802_169458807	0.0580198	PAX2.p2	BC079877|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr6_+_95067873_95067899	0.0579563	PAX2.p2	AK142080|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8	NM_001008785|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8	NM_001102670|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8
mm9_v1_chr9_+_96019793_96019850	0.0578893	PAX2.p2	AK160477|Gk5|235533|glycerol kinase 5 (putative)	AK076293|Gk5|235533|glycerol kinase 5 (putative)	AK167217|Gk5|235533|glycerol kinase 5 (putative)	AK049275|Gk5|235533|glycerol kinase 5 (putative)	AK162119|Gk5|235533|glycerol kinase 5 (putative)	NM_177352|Gk5|235533|glycerol kinase 5 (putative)	AK163031|Gk5|235533|glycerol kinase 5 (putative)	BC116302|Gk5|235533|glycerol kinase 5 (putative)	BC116303|Gk5|235533|glycerol kinase 5 (putative)
mm9_v1_chr5_+_141200067_141200080	0.0578634	PAX2.p2	AK139472|Amz1|231842|archaelysin family metallopeptidase 1	AK078332|Amz1|231842|archaelysin family metallopeptidase 1	NM_173405|Amz1|231842|archaelysin family metallopeptidase 1
mm9_v1_chr14_-_48188088_48188108	0.0577858	PAX2.p2	AK029330|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	AK029967|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	BC090995|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	AK054196|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)	NM_172599|Atg14|100504663|VATG14 autophagy related 14 homolog (S. cerevisiae)
mm9_v1_chr2_+_130389461_130389507	0.057711	PAX2.p2	AK169837|Mrps26|99045|mitochondrial ribosomal protein S26	AK131626|Mrps26|99045|mitochondrial ribosomal protein S26	BC048517|Mrps26|99045|mitochondrial ribosomal protein S26	NM_207207|Mrps26|99045|mitochondrial ribosomal protein S26
mm9_v1_chr15_-_58046428_58046480	0.0574919	PAX2.p2	AK014793|Fbxo32|67731|F-box protein 32	NM_026346|Fbxo32|67731|F-box protein 32	AF441120|Fbxo32|67731|F-box protein 32
mm9_v1_chr1_-_36603970_36604088	0.0573237	PAX2.p2	AK177190|Ankrd39|109346|ankyrin repeat domain 39	AK018681|Ankrd39|109346|ankyrin repeat domain 39	AK042896|Ankrd39|109346|ankyrin repeat domain 39	NM_026241|Ankrd39|109346|ankyrin repeat domain 39	AK160231|Ankrd39|109346|ankyrin repeat domain 39	AK081207|Ankrd39|109346|ankyrin repeat domain 39	AK030874|Ankrd39|109346|ankyrin repeat domain 39	AK158215|Ankrd39|109346|ankyrin repeat domain 39	BC117004|Ankrd39|109346|ankyrin repeat domain 39	BC119100|Ankrd39|109346|ankyrin repeat domain 39	BC144893|Ankrd39|109346|ankyrin repeat domain 39
mm9_v1_chr19_+_59420377_59420409	0.056904	PAX2.p2	AK006235|1700022C07Rik|72210|RIKEN cDNA 1700022C07 gene
mm9_v1_chr11_-_83462722_83462879	0.0568522	PAX2.p2	AK153155|Ccl3|20302|chemokine (C-C motif) ligand 3	EU366956|Ccl3|20302|chemokine (C-C motif) ligand 3	BC111443|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065939|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065940|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065941|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065942|Ccl3|20302|chemokine (C-C motif) ligand 3	AF065943|Ccl3|20302|chemokine (C-C motif) ligand 3	J04491|Ccl3|20302|chemokine (C-C motif) ligand 3	X12531|Ccl3|20302|chemokine (C-C motif) ligand 3	M23447|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150590|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150634|Ccl3|20302|chemokine (C-C motif) ligand 3	AK150698|Ccl3|20302|chemokine (C-C motif) ligand 3	AK151581|Ccl3|20302|chemokine (C-C motif) ligand 3	AK152648|Ccl3|20302|chemokine (C-C motif) ligand 3	AK155058|Ccl3|20302|chemokine (C-C motif) ligand 3	NM_011337|Ccl3|20302|chemokine (C-C motif) ligand 3
mm9_v1_chr18_-_43219062_43219124	0.0567203	PAX2.p2	BC026686|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	AK148956|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	AK013600|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	NM_028392|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm9_v1_chr9_-_61762220_61762398	0.0566739	PAX2.p2	BC013252|Rplp1|56040|ribosomal protein, large, P1	BC092536|Rplp1|56040|ribosomal protein, large, P1	NM_018853|Rplp1|56040|ribosomal protein, large, P1	BC092088|Rplp1|56040|ribosomal protein, large, P1	BC091747|Rplp1|56040|ribosomal protein, large, P1	BC058685|Rplp1|56040|ribosomal protein, large, P1	U29402|Rplp1|56040|ribosomal protein, large, P1	AK007832|Rplp1|56040|ribosomal protein, large, P1	AK088070|Rplp1|56040|ribosomal protein, large, P1	AK169347|Rplp1|56040|ribosomal protein, large, P1	AK010656|Rplp1|56040|ribosomal protein, large, P1
mm9_v1_chr11_-_79337251_79337263	0.0565907	PAX2.p2	NM_001077496|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr3_-_68930721_68930780	0.0565901	PAX2.p2	AF020771|Kpna4|16649|karyopherin (importin) alpha 4	CT010281|Kpna4|16649|karyopherin (importin) alpha 4
mm9_v1_chrM_+_3844_3864	0.0559912	PAX2.p2	
mm9_v1_chrX_-_157432580_157432627	0.0559853	PAX2.p2	AK139220|Cdkl5|382253|cyclin-dependent kinase-like 5	AK052380|Cdkl5|382253|cyclin-dependent kinase-like 5	NM_001024624|Cdkl5|382253|cyclin-dependent kinase-like 5
mm9_v1_chr9_+_44863270_44863299	0.0559665	PAX2.p2	AK041037|Mpzl3|319742|myelin protein zero-like 3	NM_176993|Mpzl3|319742|myelin protein zero-like 3	AK049878|Mpzl3|319742|myelin protein zero-like 3	BC132150|Mpzl3|319742|myelin protein zero-like 3	EF102773|Mpzl3|319742|myelin protein zero-like 3	NM_001093749|Mpzl3|319742|myelin protein zero-like 3
mm9_v1_chr17_+_31701700_31701809	0.0559124	PAX2.p2	NM_016670|Pknox1|18771|Pbx/knotted 1 homeobox	AF061270|Pknox1|18771|Pbx/knotted 1 homeobox	AK134000|Pknox1|18771|Pbx/knotted 1 homeobox
mm9_v1_chr7_+_5008311_5008341	0.0557931	PAX2.p2	NM_146178|Ccdc106|232821|coiled-coil domain containing 106	AB041804|Ccdc106|232821|coiled-coil domain containing 106
mm9_v1_chr11_-_94515067_94515072	0.0554804	PAX2.p2	AK078516|Eme1|268465|essential meiotic endonuclease 1 homolog 1 (S. pombe)	NM_177752|Eme1|268465|essential meiotic endonuclease 1 homolog 1 (S. pombe)
mm9_v1_chr8_-_86781160_86781224	0.0554292	PAX2.p2	AK144807|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK007709|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	BC025049|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK010538|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK013882|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK164894|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK164635|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	NM_026423|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK047287|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)
mm9_v1_chr2_-_25325196_25325238	0.0551178	PAX2.p2	X89222|Ptgds|19215|prostaglandin D2 synthase (brain)
mm9_v1_chr7_-_26004870_26004903	0.0550878	PAX2.p2	AK043908|Dedd2|67379|death effector domain-containing DNA binding protein 2	BC092250|Dedd2|67379|death effector domain-containing DNA binding protein 2	NM_207677|Dedd2|67379|death effector domain-containing DNA binding protein 2	AK135320|Dedd2|67379|death effector domain-containing DNA binding protein 2
mm9_v1_chr8_+_127536939_127537091	0.055044	PAX2.p2	AK014437|Tsnax|53424|translin-associated factor X	AK146339|Tsnax|53424|translin-associated factor X	AK030407|Tsnax|53424|translin-associated factor X	BC004611|Tsnax|53424|translin-associated factor X	AK189358|Tsnax|53424|translin-associated factor X
mm9_v1_chrX_-_103415034_103415180	0.055016	PAX2.p2	AK135097|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001001176|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr1_-_59293936_59294089	0.0549936	PAX2.p2	AK029858|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_001159948|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	BC046828|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	BC031479|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	AB053307|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_028717|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_146109|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)
mm9_v1_chr15_+_58720783_58720964	0.0549814	PAX2.p2	AK029069|Rnf139|75841|ring finger protein 139	NM_175226|Rnf139|75841|ring finger protein 139	AK028400|Rnf139|75841|ring finger protein 139	BC052901|Rnf139|75841|ring finger protein 139	AK033506|Rnf139|75841|ring finger protein 139	AK171807|Tatdn1|69694|TatD DNase domain containing 1
mm9_v1_chr5_-_122907269_122907331	0.054919	PAX2.p2	AK195483|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK198267|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK202908|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK209825|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC022584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr11_+_102622885_102622911	0.0544472	PAX2.p2	BC054536|Adam11|11488|a disintegrin and metallopeptidase domain 11
mm9_v1_chr3_+_99966432_99966482	0.0543982	PAX2.p2	AK004887|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2	NM_010269|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2	AK161122|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2	AK166799|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2	AK166859|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2	BC025070|Gdap2|14547|ganglioside-induced differentiation-associated-protein 2
mm9_v1_chr3_-_51908927_51908997	0.0543671	PAX2.p2	NM_001004176|Maml3|433586|mastermind like 3 (Drosophila)
mm9_v1_chr2_+_92215590_92215711	0.0541957	PAX2.p2	BC010822|Pex16|18633|peroxisomal biogenesis factor 16
mm9_v1_chr8_-_67373608_67373666	0.0533432	PAX2.p2	AK167903|Klhl2|77113|kelch-like 2, Mayven (Drosophila)
mm9_v1_chr17_+_25970057_25970093	0.0527666	PAX2.p2	AK009713|Stub1|56424|STIP1 homology and U-Box containing protein 1
mm9_v1_chr6_-_87793459_87793650	0.0525541	PAX2.p2	AK211658|Cnbp|12785|cellular nucleic acid binding protein	BC003805|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr1_+_17135421_17135611	0.0522657	PAX2.p2	AK149281|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK083814|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	NM_010267|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK045460|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	Y17850|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK020988|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC048177|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC060212|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK049655|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC051135|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK139057|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1
mm9_v1_chr4_-_94645735_94645794	0.0522239	PAX2.p2	AK164103|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK081684|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK145221|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK166402|Mysm1|320713|myb-like, SWIRM and MPN domains 1	BC150946|Mysm1|320713|myb-like, SWIRM and MPN domains 1	BC151172|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK043802|Mysm1|320713|myb-like, SWIRM and MPN domains 1	NM_177239|Mysm1|320713|myb-like, SWIRM and MPN domains 1
mm9_v1_chr11_-_53705099_53705188	0.0520947	PAX2.p2	AB015800|Slc22a5|20520|solute carrier family 22 (organic cation transporter), member 5	AF111425|Slc22a5|20520|solute carrier family 22 (organic cation transporter), member 5	AF110417|Slc22a5|20520|solute carrier family 22 (organic cation transporter), member 5	BC031118|Slc22a5|20520|solute carrier family 22 (organic cation transporter), member 5	AK167451|Slc22a5|20520|solute carrier family 22 (organic cation transporter), member 5
mm9_v1_chr14_+_63761085_63761315	0.0520071	PAX2.p2	X54966|Ctsb|13030|cathepsin B
mm9_v1_chr11_-_97643570_97643598	0.0518754	PAX2.p2	AK139855|Rpl23|65019|ribosomal protein L23
mm9_v1_chr2_+_112219335_112219462	0.0515818	PAX2.p2	AK036861|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	NM_024254|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK168639|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK049599|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK151464|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK010654|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK152570|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC003216|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC012402|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC080661|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK162183|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene
mm9_v1_chr17_+_24544500_24544654	0.0512508	PAX2.p2	BC049911|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	BC056614|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr9_+_15043658_15043696	0.0511586	PAX2.p2	AK161045|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene
mm9_v1_chr9_-_107192203_107192207	0.0511067	PAX2.p2	AK170456|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	BC031467|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	NM_178907|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3
mm9_v1_chr8_-_127472730_127472856	0.0510235	PAX2.p2	AJ310546|Egln1|112405|EGL nine homolog 1 (C. elegans)
mm9_v1_chr18_+_31919477_31919481	0.0508985	PAX2.p2	AK151060|Ammecr1l|225339|AMME chromosomal region gene 1-like	AK054131|Ammecr1l|225339|AMME chromosomal region gene 1-like
mm9_v1_chr12_+_45429966_45429998	0.0506032	PAX2.p2	AJ543321|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr13_-_49311308_49311436	0.0505208	PAX2.p2	BC147073|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene	BC147074|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene	AK154517|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene	AK003526|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene	NM_026738|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene
mm9_v1_chr19_+_32463705_32463724	0.0503442	PAX2.p2	AK035700|2700046G09Rik|67188|RIKEN cDNA 2700046G09 gene	AK012385|2700046G09Rik|67188|RIKEN cDNA 2700046G09 gene	AK019229|2700046G09Rik|67188|RIKEN cDNA 2700046G09 gene
mm9_v1_chr6_+_115551903_115551958	0.0503407	PAX2.p2	BC025547|Mkrn2|67027|makorin, ring finger protein, 2	AK009515|Mkrn2|67027|makorin, ring finger protein, 2	AK077926|Mkrn2|67027|makorin, ring finger protein, 2	NM_023290|Mkrn2|67027|makorin, ring finger protein, 2
mm9_v1_chr19_-_58935470_58935484	0.0503324	PAX2.p2	AY196789|Hspa12a|73442|heat shock protein 12A	AK141925|Hspa12a|73442|heat shock protein 12A	NM_175199|Hspa12a|73442|heat shock protein 12A
mm9_v1_chr6_+_71493841_71493983	0.0502742	PAX2.p2	AK083562|Vps24|66700|vacuolar protein sorting 24 (yeast)	NM_025783|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK018611|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK014818|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK016677|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC049964|Vps24|66700|vacuolar protein sorting 24 (yeast)	AK009414|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC027441|Vps24|66700|vacuolar protein sorting 24 (yeast)	BC039759|Vps24|66700|vacuolar protein sorting 24 (yeast)
mm9_v1_chr1_-_193220824_193220968	0.0501849	PAX2.p2	AK145397|Ppp2r5a|226849|protein phosphatase 2, regulatory subunit B (B56), alpha isoform	BC059026|Ppp2r5a|226849|protein phosphatase 2, regulatory subunit B (B56), alpha isoform	NM_144880|Ppp2r5a|226849|protein phosphatase 2, regulatory subunit B (B56), alpha isoform
mm9_v1_chr10_-_10802102_10802153	0.0501529	PAX2.p2	BC067057|Grm1|14816|glutamate receptor, metabotropic 1	NM_001114333|Grm1|14816|glutamate receptor, metabotropic 1	NM_016976|Grm1|14816|glutamate receptor, metabotropic 1	AF320126|Grm1|14816|glutamate receptor, metabotropic 1
mm9_v1_chr13_-_47138563_47138585	0.0501116	PAX2.p2	AF046887|Tpmt|22017|thiopurine methyltransferase	NM_016785|Tpmt|22017|thiopurine methyltransferase
mm9_v1_chr5_+_145875080_145875194	0.0500822	PAX2.p2	AK002274|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK005378|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK151911|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK153510|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	NM_023142|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK159371|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK159477|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK168774|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK148145|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK157098|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK170759|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK172124|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK147731|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK171364|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	BC092051|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK180107|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK197333|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	BC003441|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK167978|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	BC010275|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr4_+_132925622_132925655	0.049727	PAX2.p2	AK154857|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1
mm9_v1_chrX_+_132673583_132673679	0.0496813	PAX2.p2	AK010400|Bex4|406217|brain expressed gene 4	AY833558|Bex4|406217|brain expressed gene 4	NM_212457|Bex4|406217|brain expressed gene 4	BC090663|Bex4|406217|brain expressed gene 4	BC116226|Bex4|406217|brain expressed gene 4
mm9_v1_chr18_+_62339779_62339836	0.049384	PAX2.p2	AK042188|Gm9949|225609|predicted gene 9949
mm9_v1_chr17_-_34167827_34167929	0.049268	PAX2.p2	AK197290|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7
mm9_v1_chr7_+_28232980_28232996	0.049217	PAX2.p2	BC027279|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))	NM_144923|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))
mm9_v1_chrX_+_20265584_20265589	0.0491469	PAX2.p2	AK145483|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr2_-_31701432_31701524	0.0491254	PAX2.p2	AK046338|Fibcd1|98970|fibrinogen C domain containing 1	AK084379|Fibcd1|98970|fibrinogen C domain containing 1	BC060634|Fibcd1|98970|fibrinogen C domain containing 1	NM_178887|Fibcd1|98970|fibrinogen C domain containing 1
mm9_v1_chr1_+_189821727_189821874	0.0490512	PAX2.p2	BC082324|Esrrg|26381|estrogen-related receptor gamma	NM_011935|Esrrg|26381|estrogen-related receptor gamma	AB093266|Esrrg|26381|estrogen-related receptor gamma	AF117254|Esrrg|26381|estrogen-related receptor gamma	AB221580|Esrrg|26381|estrogen-related receptor gamma
mm9_v1_chr5_-_100407613_100407631	0.0489934	PAX2.p2	BC011172|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr17_+_35400056_35400113	0.0489424	PAX2.p2	L36068|H2-D1|14964|histocompatibility 2, D region locus 1	M69067|H2-L|14980|histocompatibility 2, D region	M69068|H2-L|14980|histocompatibility 2, D region	M86502|H2-L|14980|histocompatibility 2, D region	U47325|H2-D1|14964|histocompatibility 2, D region locus 1	BC106173|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr7_-_75893927_75894127	0.0485408	PAX2.p2	DQ861996|Arrdc4|66412|arrestin domain containing 4	BC017528|Arrdc4|66412|arrestin domain containing 4	AK010022|Arrdc4|66412|arrestin domain containing 4	AK037198|Arrdc4|66412|arrestin domain containing 4	NM_001042592|Arrdc4|66412|arrestin domain containing 4	NM_025549|Arrdc4|66412|arrestin domain containing 4	AK010352|Arrdc4|66412|arrestin domain containing 4
mm9_v1_chr7_-_51807815_51807956	0.0482586	PAX2.p2	
mm9_v1_chr3_-_146394874_146394956	0.0481246	PAX2.p2	AK204254|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr7_-_28338185_28338214	0.047987	PAX2.p2	BC076586|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr18_+_65048630_65048682	0.0479348	PAX2.p2	AK042621|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr11_+_94981430_94981448	0.0478774	PAX2.p2	NM_010055|Dlx3|13393|distal-less homeobox 3	BC058852|Dlx3|13393|distal-less homeobox 3
mm9_v1_chr10_+_82448326_82448493	0.0477183	PAX2.p2	BC137629|Chst11|58250|carbohydrate sulfotransferase 11	BC144793|Chst11|58250|carbohydrate sulfotransferase 11
mm9_v1_chr15_+_73555336_73555359	0.047231	PAX2.p2	BC066043|Ptp4a3|19245|protein tyrosine phosphatase 4a3	NM_001166388|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr12_-_99497200_99497260	0.047171	PAX2.p2	AK020833|Galc|14420|galactosylceramidase
mm9_v1_chr4_+_132925684_132925804	0.0468659	PAX2.p2	AK150135|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1	AK165501|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1	NM_016981|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1	BC052708|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1
mm9_v1_chr3_-_116415169_116415197	0.0463164	PAX2.p2	BC024110|Slc35a3|229782|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3	AK082040|Slc35a3|229782|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3	AK049484|Slc35a3|229782|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3	NM_144902|Slc35a3|229782|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm9_v1_chr11_-_116515232_116515303	0.0462432	PAX2.p2	AJ315163|Cygb|114886|cytoglobin
mm9_v1_chr7_-_82453216_82453273	0.0458824	PAX2.p2	AK147261|Sv2b|64176|synaptic vesicle glycoprotein 2 b	NM_001109753|Sv2b|64176|synaptic vesicle glycoprotein 2 b
mm9_v1_chr13_+_106233718_106234065	0.0458147	PAX2.p2	AK140194|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	NM_008308|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	AK049884|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	AK049814|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	BC138669|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	BC138681|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A
mm9_v1_chr15_-_36937065_36937180	0.0456299	PAX2.p2	AK132053|Zfp706|68036|zinc finger protein 706	AK167897|Zfp706|68036|zinc finger protein 706	AK168303|Zfp706|68036|zinc finger protein 706	BC054356|Zfp706|68036|zinc finger protein 706	AK167791|Zfp706|68036|zinc finger protein 706	BC052459|Zfp706|68036|zinc finger protein 706	NM_026521|Zfp706|68036|zinc finger protein 706
mm9_v1_chr17_-_27760308_27760448	0.0456017	PAX2.p2	AF264064|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	NM_019837|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	BC046805|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	BC016534|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm9_v1_chr9_-_29219306_29219337	0.045443	PAX2.p2	AF282980|Ntm|235106|neurotrimin	BC023307|Ntm|235106|neurotrimin
mm9_v1_chr11_+_102622915_102622919	0.0451785	PAX2.p2	AB009676|Adam11|11488|a disintegrin and metallopeptidase domain 11
mm9_v1_chr11_-_60166405_60166439	0.0450535	PAX2.p2	AK166040|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_001039092|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_001039093|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_153080|Tom1l2|216810|target of myb1-like 2 (chicken)
mm9_v1_chr18_+_69753146_69753168	0.0449777	PAX2.p2	AK151433|Tcf4|21413|transcription factor 4
mm9_v1_chr11_-_86807135_86807208	0.0447066	PAX2.p2	BC121190|Ypel2|77864|yippee-like 2 (Drosophila)	AK089126|Ypel2|77864|yippee-like 2 (Drosophila)	AK021387|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr1_+_82721477_82721553	0.044691	PAX2.p2	BC059229|Mff|75734|mitochondrial fission factor	NM_029409|Mff|75734|mitochondrial fission factor	AK017226|Mff|75734|mitochondrial fission factor	AK083056|Mff|75734|mitochondrial fission factor	AK139649|Mff|75734|mitochondrial fission factor
mm9_v1_chr11_+_20101404_20101502	0.0443644	PAX2.p2	AK166249|Rab1|19324|RAB1, member RAS oncogene family	AK152978|Rab1|19324|RAB1, member RAS oncogene family	AK167150|Rab1|19324|RAB1, member RAS oncogene family	AK034408|Rab1|19324|RAB1, member RAS oncogene family	AK050526|Rab1|19324|RAB1, member RAS oncogene family	AK151085|Rab1|19324|RAB1, member RAS oncogene family	AK159425|Rab1|19324|RAB1, member RAS oncogene family	AK129477|Rab1|19324|RAB1, member RAS oncogene family	BC002077|Rab1|19324|RAB1, member RAS oncogene family	Y00094|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr5_-_135554038_135554160	0.0442997	PAX2.p2	BC044789|Vps37d|194309|vacuolar protein sorting 37D (yeast)	AK158287|Vps37d|194309|vacuolar protein sorting 37D (yeast)	AK090181|Vps37d|194309|vacuolar protein sorting 37D (yeast)	AY081953|Vps37d|194309|vacuolar protein sorting 37D (yeast)	AY352519|Vps37d|194309|vacuolar protein sorting 37D (yeast)	NM_177574|Vps37d|194309|vacuolar protein sorting 37D (yeast)
mm9_v1_chr5_+_14514975_14515013	0.0442539	PAX2.p2	AB083477|Pclo|26875|piccolo (presynaptic cytomatrix protein)	AB083478|Pclo|26875|piccolo (presynaptic cytomatrix protein)
mm9_v1_chr5_+_23957994_23958094	0.044227	PAX2.p2	AF459091|Agap3|213990|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3	NM_139153|Agap3|213990|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3	AB078345|Agap3|213990|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
mm9_v1_chr6_+_124989830_124989833	0.0441339	PAX2.p2	
mm9_v1_chr4_+_125939622_125939671	0.0441087	PAX2.p2	AK151747|Trappc3|27096|trafficking protein particle complex 3	BC003736|Trappc3|27096|trafficking protein particle complex 3	NM_013718|Trappc3|27096|trafficking protein particle complex 3	AF041433|Trappc3|27096|trafficking protein particle complex 3
mm9_v1_chr2_+_90730089_90730144	0.0440319	PAX2.p2	AK029777|C1qtnf4|67445|C1q and tumor necrosis factor related protein 4
mm9_v1_chr8_+_97362292_97362384	0.0437704	PAX2.p2	AK154343|Coq9|67914|coenzyme Q9 homolog (yeast)	AK158979|Coq9|67914|coenzyme Q9 homolog (yeast)	AK009179|Coq9|67914|coenzyme Q9 homolog (yeast)	BC036386|Coq9|67914|coenzyme Q9 homolog (yeast)	NM_026452|Coq9|67914|coenzyme Q9 homolog (yeast)	AK217654|Coq9|67914|coenzyme Q9 homolog (yeast)
mm9_v1_chr16_-_17722915_17723043	0.0437209	PAX2.p2	AF328770|Med15|94112|mediator complex subunit 15	AK131186|Med15|94112|mediator complex subunit 15	AK171628|Med15|94112|mediator complex subunit 15	BC054779|Med15|94112|mediator complex subunit 15	AK166522|Med15|94112|mediator complex subunit 15	AK038915|Med15|94112|mediator complex subunit 15	AK052231|Med15|94112|mediator complex subunit 15	AK142224|Med15|94112|mediator complex subunit 15	NM_001040683|Med15|94112|mediator complex subunit 15	NM_033609|Med15|94112|mediator complex subunit 15	AK169904|Med15|94112|mediator complex subunit 15
mm9_v1_chr1_-_186823350_186823427	0.0436582	PAX2.p2	AB185282|Mark1|226778|MAP/microtubule affinity-regulating kinase 1	BC112400|Mark1|226778|MAP/microtubule affinity-regulating kinase 1	AF453686|Mark1|226778|MAP/microtubule affinity-regulating kinase 1	NM_145515|Mark1|226778|MAP/microtubule affinity-regulating kinase 1
mm9_v1_chr10_+_127896244_127896376	0.0434897	PAX2.p2	NM_001114096|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_001114097|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_198160|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC058720|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK089461|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK170530|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK146971|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC040363|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm9_v1_chr2_+_119151519_119151564	0.0434316	PAX2.p2	AK052322|Dll4|54485|delta-like 4 (Drosophila)	NM_019454|Dll4|54485|delta-like 4 (Drosophila)	AK004739|Dll4|54485|delta-like 4 (Drosophila)	AK031699|Dll4|54485|delta-like 4 (Drosophila)	AK165517|Dll4|54485|delta-like 4 (Drosophila)	AK171717|Dll4|54485|delta-like 4 (Drosophila)	BC049130|Dll4|54485|delta-like 4 (Drosophila)	AF253469|Dll4|54485|delta-like 4 (Drosophila)	BC042497|Dll4|54485|delta-like 4 (Drosophila)
mm9_v1_chr5_-_144984391_144984416	0.0432217	PAX2.p2	AK169888|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK170108|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AB093295|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr12_-_81233799_81233831	0.0431556	PAX2.p2	AK053779|2310015A10Rik|69548|RIKEN cDNA 2310015A10 gene	AK160272|2310015A10Rik|69548|RIKEN cDNA 2310015A10 gene
mm9_v1_chr18_-_56732522_56732548	0.0429499	PAX2.p2	AK004991|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr6_+_146837012_146837178	0.0428417	PAX2.p2	NM_001170433|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	NM_026221|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK146575|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC072603|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK154482|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK173133|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC035209|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm9_v1_chr7_+_134388006_134388047	0.0426586	PAX2.p2	AK090240|Zfp771|244216|zinc finger protein 771	NM_177362|Zfp771|244216|zinc finger protein 771	AK159461|Zfp771|244216|zinc finger protein 771
mm9_v1_chr5_+_115461102_115461223	0.0425842	PAX2.p2	BC086646|Sppl3|74585|signal peptide peptidase 3	AK014709|Sppl3|74585|signal peptide peptidase 3
mm9_v1_chr11_-_70817905_70817971	0.0425524	PAX2.p2	BC027842|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	BC052172|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK035177|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_178367|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK087592|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33
mm9_v1_chr2_-_102241003_102241049	0.0424945	PAX2.p2	AJ249129|Trim44|80985|tripartite motif-containing 44	BC098369|Trim44|80985|tripartite motif-containing 44
mm9_v1_chr13_-_64254466_64254592	0.042444	PAX2.p2	BC119531|Zfp367|238673|zinc finger protein 367	BC119532|Zfp367|238673|zinc finger protein 367	AK033288|Zfp367|238673|zinc finger protein 367	NM_175494|Zfp367|238673|zinc finger protein 367	AK041331|Zfp367|238673|zinc finger protein 367	AK041361|Zfp367|238673|zinc finger protein 367	AK077686|Zfp367|238673|zinc finger protein 367
mm9_v1_chr6_-_53018566_53018625	0.0422468	PAX2.p2	AK043767|Jazf1|231986|JAZF zinc finger 1	AK050474|Jazf1|231986|JAZF zinc finger 1	NM_173406|Jazf1|231986|JAZF zinc finger 1
mm9_v1_chr10_+_126632304_126632334	0.0421325	PAX2.p2	AK165234|F420014N23Rik|100038591|RIKEN cDNA F420014N23 gene
mm9_v1_chr13_-_49311136_49311281	0.042101	PAX2.p2	BC047205|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene	BC023485|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene
mm9_v1_chr7_-_52309439_52309541	0.0420914	PAX2.p2	AK011086|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm9_v1_chr14_+_59820064_59820146	0.0419511	PAX2.p2	NM_027764|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK089923|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK088299|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	BC067005|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK033501|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm9_v1_chr2_+_155343787_155343801	0.0416893	PAX2.p2	AK029262|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK003738|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK028586|Acss2|60525|acyl-CoA synthetase short-chain family member 2	AK093831|Acss2|60525|acyl-CoA synthetase short-chain family member 2
mm9_v1_chr3_+_55265654_55265683	0.041346	PAX2.p2	NM_001111051|Dclk1|13175|doublecortin-like kinase 1	NM_001111052|Dclk1|13175|doublecortin-like kinase 1	NM_001195539|Dclk1|13175|doublecortin-like kinase 1	NM_001195540|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr3_-_57651409_57651501	0.0413053	PAX2.p2	AJ272203|Pfn2|18645|profilin 2	BC024363|Pfn2|18645|profilin 2	AK132651|Pfn2|18645|profilin 2
mm9_v1_chr3_-_94590356_94590436	0.0412734	PAX2.p2	BC052941|Cgn|70737|cingulin	AK018143|Cgn|70737|cingulin	BC108378|Cgn|70737|cingulin	BC042459|Cgn|70737|cingulin	BC064474|Cgn|70737|cingulin	BC087546|Cgn|70737|cingulin	AK173148|Cgn|70737|cingulin	NM_001037711|Cgn|70737|cingulin
mm9_v1_chr7_+_19589395_19589469	0.0412711	PAX2.p2	AK087457|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK031834|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	BC036162|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	NM_178757|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK032010|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1
mm9_v1_chrM_+_2750_2751	0.0410235	PAX2.p2	
mm9_v1_chr8_-_81032819_81032836	0.040921	PAX2.p2	NM_009033|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene
mm9_v1_chr17_+_29405732_29405781	0.0408226	PAX2.p2	NM_030561|BC004004|80748|cDNA sequence BC004004
mm9_v1_chrX_+_13209894_13209986	0.0408025	PAX2.p2	DQ103766|Gpr34|23890|G protein-coupled receptor 34	DQ103767|Gpr34|23890|G protein-coupled receptor 34	NM_011823|Gpr34|23890|G protein-coupled receptor 34	AK033675|Gpr34|23890|G protein-coupled receptor 34	AK039528|Gpr34|23890|G protein-coupled receptor 34	AK039041|Gpr34|23890|G protein-coupled receptor 34	AK140507|Gpr34|23890|G protein-coupled receptor 34
mm9_v1_chr8_+_3516840_3516873	0.0407825	PAX2.p2	AK162641|Pnpla6|50767|patatin-like phospholipase domain containing 6	AK089095|Pnpla6|50767|patatin-like phospholipase domain containing 6
mm9_v1_chr17_-_86566816_86566826	0.0406919	PAX2.p2	AK135560|Gm5817|545228|predicted gene 5817
mm9_v1_chr3_-_96044172_96044256	0.0404184	PAX2.p2	NM_178212|Hist2h2aa2|319192|histone cluster 2, H2aa2	Z30940|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC010564|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC053966|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC062255|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK002725|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK006728|Hist2h2aa1|15267|histone cluster 2, H2aa1	NM_013549|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147778|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147781|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC089519|Hist2h2aa1|15267|histone cluster 2, H2aa1
mm9_v1_chr11_+_119352660_119352688	0.0402263	PAX2.p2	AK084233|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	NM_001164636|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK084548|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene
mm9_v1_chr10_-_79379610_79379750	0.0402188	PAX2.p2	AK165610|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK159869|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	BC095970|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK081288|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK139047|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK088107|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	NM_177994|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	BC132463|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	BC138461|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene
mm9_v1_chr2_+_59450080_59450110	0.0401888	PAX2.p2	NM_198294|Tanc1|66860|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm9_v1_chr11_-_97560651_97560697	0.0398026	PAX2.p2	BC016419|Pcgf2|22658|polycomb group ring finger 2	NM_001163307|Pcgf2|22658|polycomb group ring finger 2
mm9_v1_chr15_-_36538288_36538422	0.0397458	PAX2.p2	BC023145|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC003870|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr15_-_79762947_79763095	0.0395309	PAX2.p2	AB221539|Cbx7|52609|chromobox homolog 7	AK045714|Cbx7|52609|chromobox homolog 7	NM_144811|Cbx7|52609|chromobox homolog 7
mm9_v1_chr17_-_6079672_6079748	0.0393089	PAX2.p2	AK162246|Serac1|321007|serine active site containing 1	AK154605|Serac1|321007|serine active site containing 1	AK170498|Serac1|321007|serine active site containing 1	AK019677|Serac1|321007|serine active site containing 1	BC119594|Serac1|321007|serine active site containing 1	BC119595|Serac1|321007|serine active site containing 1	NM_001111017|Serac1|321007|serine active site containing 1	NM_177311|Serac1|321007|serine active site containing 1	AK155571|Serac1|321007|serine active site containing 1
mm9_v1_chr7_+_53040723_53040749	0.0392849	PAX2.p2	BC083185|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chrX_+_7455387_7455511	0.0390759	PAX2.p2	AK043570|Pim2|18715|proviral integration site 2	L41495|Pim2|18715|proviral integration site 2	NM_138606|Pim2|18715|proviral integration site 2	BC027376|Pim2|18715|proviral integration site 2
mm9_v1_chr19_-_59420234_59420350	0.0389932	PAX2.p2	AK145020|Pdzd8|107368|PDZ domain containing 8	NM_001033222|Pdzd8|107368|PDZ domain containing 8
mm9_v1_chr6_+_18120686_18120770	0.0388333	PAX2.p2	M60493|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	M69298|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	NM_021050|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	AK033621|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog
mm9_v1_chr11_-_96838940_96839063	0.0388162	PAX2.p2	GU126673|Sp2|78912|Sp2 transcription factor	AK139302|Sp2|78912|Sp2 transcription factor	BC086457|Sp2|78912|Sp2 transcription factor	BC021759|Sp2|78912|Sp2 transcription factor	AK078246|Sp2|78912|Sp2 transcription factor	AK156580|Sp2|78912|Sp2 transcription factor	NM_001080964|Sp2|78912|Sp2 transcription factor	NM_030220|Sp2|78912|Sp2 transcription factor
mm9_v1_chr11_-_51670563_51670645	0.0386767	PAX2.p2	AK035317|Phf15|76901|PHD finger protein 15
mm9_v1_chrX_+_71542425_71542435	0.0384687	PAX2.p2	NM_018794|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1
mm9_v1_chrX_+_65931715_65931923	0.0384416	PAX2.p2	AK053829|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	BC079671|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	NM_008031|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK140343|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK046605|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK053701|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK080898|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK080948|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	L23971|Fmr1|14265|fragile X mental retardation syndrome 1 homolog
mm9_v1_chr9_+_123060076_123060088	0.0384328	PAX2.p2	U08595|Clec3b|21922|C-type lectin domain family 3, member b	X79199|Clec3b|21922|C-type lectin domain family 3, member b
mm9_v1_chr17_-_35258136_35258391	0.0383945	PAX2.p2	AK012369|Csnk2b|13001|casein kinase 2, beta polypeptide	X56502|Csnk2b|13001|casein kinase 2, beta polypeptide	AK010730|Csnk2b|13001|casein kinase 2, beta polypeptide	AK002903|Csnk2b|13001|casein kinase 2, beta polypeptide	X52959|Csnk2b|13001|casein kinase 2, beta polypeptide	AK146186|Csnk2b|13001|casein kinase 2, beta polypeptide	BC003775|Csnk2b|13001|casein kinase 2, beta polypeptide	AK161330|Csnk2b|13001|casein kinase 2, beta polypeptide	NM_009975|Csnk2b|13001|casein kinase 2, beta polypeptide
mm9_v1_chr17_-_25969869_25969905	0.0379857	PAX2.p2	AK166630|Stub1|56424|STIP1 homology and U-Box containing protein 1	AK158595|Stub1|56424|STIP1 homology and U-Box containing protein 1
mm9_v1_chr4_+_66488606_66488658	0.0379335	PAX2.p2	BC029856|Tlr4|21898|toll-like receptor 4	AK014533|Tlr4|21898|toll-like receptor 4	AK030348|Tlr4|21898|toll-like receptor 4	AF095353|Tlr4|21898|toll-like receptor 4
mm9_v1_chr19_-_11945703_11945794	0.0377415	PAX2.p2	NM_001011775|Olfr1419|257938|olfactory receptor 1419	BC147200|Olfr1419|257938|olfactory receptor 1419	BC147201|Olfr1419|257938|olfactory receptor 1419
mm9_v1_chrX_-_93152223_93152253	0.0376414	PAX2.p2	BC032218|Las1l|76130|LAS1-like (S. cerevisiae)	AK018059|Las1l|76130|LAS1-like (S. cerevisiae)	BC141155|Las1l|76130|LAS1-like (S. cerevisiae)
mm9_v1_chr1_-_75176703_75176874	0.0375806	PAX2.p2	AF045562|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	BC006634|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	NM_023732|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK040323|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK164003|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chrX_-_137908516_137908603	0.037513	PAX2.p2	BC057648|Col4a6|94216|collagen, type IV, alpha 6	AK165178|Col4a6|94216|collagen, type IV, alpha 6
mm9_v1_chr3_+_95697820_95698061	0.0374154	PAX2.p2	AK148400|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC057865|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	AK152334|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC012406|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146104|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC024111|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146134|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)
mm9_v1_chr9_+_4309898_4309898	0.037377	PAX2.p2	AK168345|Kbtbd3|69149|kelch repeat and BTB (POZ) domain containing 3
mm9_v1_chrX_-_69901382_69901584	0.0373768	PAX2.p2	BC119317|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	BC120686|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	M86568|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK134760|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK039144|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	NM_008067|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
mm9_v1_chr4_-_58566053_58566195	0.0372845	PAX2.p2	BC025425|Lpar1|14745|lysophosphatidic acid receptor 1	AK030330|Lpar1|14745|lysophosphatidic acid receptor 1	NM_172989|Lpar1|14745|lysophosphatidic acid receptor 1
mm9_v1_chr6_+_113554717_113554774	0.0372421	PAX2.p2	AK003342|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK020128|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK020277|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK150689|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK163236|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK166585|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	BC010582|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	NM_133937|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene
mm9_v1_chr4_-_151235861_151235879	0.0370979	PAX2.p2	AK158710|Camta1|100072|calmodulin binding transcription activator 1	NM_001081557|Camta1|100072|calmodulin binding transcription activator 1	NM_001195565|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr5_+_93696566_93696638	0.0368354	PAX2.p2	NM_007635|Ccng2|12452|cyclin G2	AK170651|Ccng2|12452|cyclin G2	AF005885|Ccng2|12452|cyclin G2
mm9_v1_chr11_-_118164820_118164865	0.0368242	PAX2.p2	
mm9_v1_chr12_+_30512469_30512567	0.0368185	PAX2.p2	AK049967|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr18_-_75857207_75857349	0.0367544	PAX2.p2	BC058104|Ctif|269037|CBP80/20-dependent translation initiation factor	NM_201354|Ctif|269037|CBP80/20-dependent translation initiation factor
mm9_v1_chr10_+_80065598_80065660	0.0366764	PAX2.p2	AK019112|Scamp4|56214|secretory carrier membrane protein 4	NM_001100606|Adat3|100113398|adenosine deaminase, tRNA-specific 3, TAD2 homolog (S. cerevisiae)	NM_019575|Scamp4|56214|secretory carrier membrane protein 4	AK078226|Scamp4|56214|secretory carrier membrane protein 4	AK154094|Scamp4|56214|secretory carrier membrane protein 4	AK160755|Scamp4|56214|secretory carrier membrane protein 4	AK168554|Scamp4|56214|secretory carrier membrane protein 4	BC054104|Scamp4|56214|secretory carrier membrane protein 4	BC018215|Scamp4|56214|secretory carrier membrane protein 4	AF224721|Scamp4|56214|secretory carrier membrane protein 4
mm9_v1_chr11_+_83116262_83116315	0.0366361	PAX2.p2	AK004975|Ap2b1|71770|adaptor-related protein complex 2, beta 1 subunit
mm9_v1_chr6_-_115944822_115945034	0.0366286	PAX2.p2	AY688678|Plxnd1|67784|plexin D1	AK147513|Plxnd1|67784|plexin D1	NM_026376|Plxnd1|67784|plexin D1
mm9_v1_chr6_-_125115316_125115426	0.0365695	PAX2.p2	BC096042|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase
mm9_v1_chr4_-_133684552_133684560	0.0365371	PAX2.p2	AK179341|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3
mm9_v1_chr2_+_14310024_14310041	0.0365147	PAX2.p2	NM_001012305|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	AK134622|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC089362|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113764|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113765|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12
mm9_v1_chr10_-_77927652_77927763	0.036389	PAX2.p2	BC032171|Pdxk|216134|pyridoxal (pyridoxine, vitamin B6) kinase	AK145470|Pdxk|216134|pyridoxal (pyridoxine, vitamin B6) kinase	AK166464|Pdxk|216134|pyridoxal (pyridoxine, vitamin B6) kinase	AK080846|Pdxk|216134|pyridoxal (pyridoxine, vitamin B6) kinase	AK039194|Pdxk|216134|pyridoxal (pyridoxine, vitamin B6) kinase	AK166078|Pdxk|216134|pyridoxal (pyridoxine, vitamin B6) kinase	NM_172134|Pdxk|216134|pyridoxal (pyridoxine, vitamin B6) kinase	BC027745|Pdxk|216134|pyridoxal (pyridoxine, vitamin B6) kinase
mm9_v1_chr11_+_95275577_95275627	0.0362408	PAX2.p2	BC043131|Spop|20747|speckle-type POZ protein
mm9_v1_chr15_-_37389073_37389150	0.0361785	PAX2.p2	BC026979|Ncald|52589|neurocalcin delta	AK167313|Ncald|52589|neurocalcin delta	AK034031|Ncald|52589|neurocalcin delta	NM_001170867|Ncald|52589|neurocalcin delta	NM_001170868|Ncald|52589|neurocalcin delta
mm9_v1_chr11_-_106134024_106134359	0.0361121	PAX2.p2	AK166123|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	AK159259|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	NM_001130187|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm9_v1_chr1_+_24685475_24685527	0.0360562	PAX2.p2	BC027774|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr11_-_23206307_23206325	0.0359103	PAX2.p2	AK088668|Gm3718|100042202|predicted gene 3718
mm9_v1_chr3_-_104667319_104667422	0.0358207	PAX2.p2	AK161370|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1	NM_009797|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1
mm9_v1_chr10_-_80129720_80129733	0.035606	PAX2.p2	BC013844|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr9_+_75161942_75162049	0.0354951	PAX2.p2	AK169323|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK050564|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK148175|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	L34290|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	NM_138719|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5
mm9_v1_chr2_+_155213904_155214229	0.0353837	PAX2.p2	AK194878|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK201306|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK212674|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK213253|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK188182|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK191290|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK194673|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK204807|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK200413|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK212877|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr1_+_130140700_130141098	0.0351776	PAX2.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr7_-_34977928_34978057	0.0350739	PAX2.p2	BC025090|Pdcd2l|68079|programmed cell death 2-like	BC038524|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chrX_-_151650871_151650951	0.0350657	PAX2.p2	AK154445|Sat1|20229|spermidine/spermine N1-acetyl transferase 1	AK002531|Sat1|20229|spermidine/spermine N1-acetyl transferase 1	BC058696|Sat1|20229|spermidine/spermine N1-acetyl transferase 1	NM_009121|Sat1|20229|spermidine/spermine N1-acetyl transferase 1
mm9_v1_chr13_+_88961034_88961117	0.0349774	PAX2.p2	AF031525|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK046885|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	NM_001037987|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	NM_010103|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK157810|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK141907|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK135220|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK139093|Edil3|13612|EGF-like repeats and discoidin I-like domains 3	AK036117|Edil3|13612|EGF-like repeats and discoidin I-like domains 3
mm9_v1_chr18_-_12394814_12394820	0.0345134	PAX2.p2	AK154282|Npc1|18145|Niemann Pick type C1	AK155379|Npc1|18145|Niemann Pick type C1
mm9_v1_chr2_-_56976530_56976555	0.0344401	PAX2.p2	AK087495|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2
mm9_v1_chr6_+_121250304_121250325	0.0343866	PAX2.p2	AK149557|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK002794|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	AK078399|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC029637|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	NM_144512|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	BC023117|Slc6a13|14412|solute carrier family 6 (neurotransmitter transporter, GABA), member 13
mm9_v1_chr5_-_140865121_140865262	0.0343602	PAX2.p2	AK045061|Snx8|231834|sorting nexin 8	AK082871|Snx8|231834|sorting nexin 8	AK148429|Snx8|231834|sorting nexin 8	NM_172277|Snx8|231834|sorting nexin 8	BC037599|Snx8|231834|sorting nexin 8
mm9_v1_chr3_-_95686120_95686174	0.0343196	PAX2.p2	AK156084|Gm129|229599|predicted gene 129	AK164001|Gm129|229599|predicted gene 129	NM_001033302|Gm129|229599|predicted gene 129
mm9_v1_chr2_-_5635228_5635384	0.0342995	PAX2.p2	AK052401|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	BC141413|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	BC141414|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr19_-_10599581_10599698	0.0342489	PAX2.p2	BC048913|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC038924|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC085277|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK013454|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK075594|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK160957|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	AK167228|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC058955|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	BC060090|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2	NM_025333|Sdhaf2|66072|succinate dehydrogenase complex assembly factor 2
mm9_v1_chr2_+_17976897_17976897	0.0341549	PAX2.p2	BC070475|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	NM_010804|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr16_-_30388534_30388615	0.0338209	PAX2.p2	NM_001128094|Atp13a3|224088|ATPase type 13A3	NM_001128096|Atp13a3|224088|ATPase type 13A3
mm9_v1_chr15_-_12669677_12669687	0.0338099	PAX2.p2	AK159017|Pdzd2|68070|PDZ domain containing 2
mm9_v1_chr5_-_24046180_24046274	0.0337554	PAX2.p2	AK052929|Asb10|117590|ankyrin repeat and SOCS box-containing 10	BC141311|Asb10|117590|ankyrin repeat and SOCS box-containing 10	BC141313|Asb10|117590|ankyrin repeat and SOCS box-containing 10	AK028538|Asb10|117590|ankyrin repeat and SOCS box-containing 10	NM_080444|Asb10|117590|ankyrin repeat and SOCS box-containing 10	AF398971|Asb10|117590|ankyrin repeat and SOCS box-containing 10
mm9_v1_chr3_-_129763648_129763693	0.0336531	PAX2.p2	BC057355|Sec24b|99683|Sec24 related gene family, member B (S. cerevisiae)
mm9_v1_chr19_+_56796545_56796688	0.0330244	PAX2.p2	BC140970|Adrb1|11554|adrenergic receptor, beta 1	BC147435|Adrb1|11554|adrenergic receptor, beta 1
mm9_v1_chr1_+_154613692_154613762	0.0330191	PAX2.p2	AK159407|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK017985|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr15_+_76181718_76181819	0.0329356	PAX2.p2	NM_001164607|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_001164608|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_026859|Maf1|68877|MAF1 homolog (S. cerevisiae)	BC016260|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK154047|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK042913|Maf1|68877|MAF1 homolog (S. cerevisiae)
mm9_v1_chr17_+_47506145_47506145	0.0328226	PAX2.p2	BC048912|Mrps10|64657|mitochondrial ribosomal protein S10	NM_183086|Mrps10|64657|mitochondrial ribosomal protein S10
mm9_v1_chr12_+_45429894_45429900	0.0326063	PAX2.p2	AK048567|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr17_-_34973781_34973882	0.0322909	PAX2.p2	AF099934|Stk19|54402|serine/threonine kinase 19	AK168865|Stk19|54402|serine/threonine kinase 19	BC022681|Stk19|54402|serine/threonine kinase 19	NM_019442|Stk19|54402|serine/threonine kinase 19	AK146739|Stk19|54402|serine/threonine kinase 19
mm9_v1_chr3_-_30498769_30498835	0.0321955	PAX2.p2	AK007208|Arpm1|76652|actin related protein M1	AK047260|Arpm1|76652|actin related protein M1	NM_029690|Arpm1|76652|actin related protein M1	BC107277|Arpm1|76652|actin related protein M1	BC107278|Arpm1|76652|actin related protein M1
mm9_v1_chr14_-_52898946_52899069	0.0321808	PAX2.p2	AK044202|Rab2b|76338|RAB2B, member RAS oncogene family	BC033312|Rab2b|76338|RAB2B, member RAS oncogene family	AK005230|Rab2b|76338|RAB2B, member RAS oncogene family	BC054719|Rab2b|76338|RAB2B, member RAS oncogene family	AK038393|Rab2b|76338|RAB2B, member RAS oncogene family	AK038576|Rab2b|76338|RAB2B, member RAS oncogene family	AK169657|Rab2b|76338|RAB2B, member RAS oncogene family	BC046334|Rab2b|76338|RAB2B, member RAS oncogene family	NM_172601|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr3_+_68376289_68376313	0.03215	PAX2.p2	NM_013928|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr12_+_30219982_30220081	0.0320602	PAX2.p2	AK049624|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr4_+_43575487_43575594	0.0319867	PAX2.p2	AK132785|Creb3|12913|cAMP responsive element binding protein 3	AK144208|Creb3|12913|cAMP responsive element binding protein 3	NM_013497|Creb3|12913|cAMP responsive element binding protein 3	AK090077|Creb3|12913|cAMP responsive element binding protein 3	BC002094|Creb3|12913|cAMP responsive element binding protein 3
mm9_v1_chr5_+_64551449_64551546	0.0319589	PAX2.p2	AK080526|Tbc1d1|57915|TBC1 domain family, member 1	NM_019636|Tbc1d1|57915|TBC1 domain family, member 1	AK159256|Tbc1d1|57915|TBC1 domain family, member 1	U33005|Tbc1d1|57915|TBC1 domain family, member 1
mm9_v1_chr3_+_138114362_138114455	0.0319517	PAX2.p2	
mm9_v1_chr17_+_56396215_56396281	0.0318424	PAX2.p2	NM_010192|Fem1a|14154|feminization 1 homolog a (C. elegans)	AK129000|Fem1a|14154|feminization 1 homolog a (C. elegans)	AK147879|Fem1a|14154|feminization 1 homolog a (C. elegans)	AK155363|Fem1a|14154|feminization 1 homolog a (C. elegans)	AK034412|Fem1a|14154|feminization 1 homolog a (C. elegans)	AK080978|Fem1a|14154|feminization 1 homolog a (C. elegans)	BC054382|Fem1a|14154|feminization 1 homolog a (C. elegans)	BC009161|Fem1a|14154|feminization 1 homolog a (C. elegans)	AK005041|Fem1a|14154|feminization 1 homolog a (C. elegans)	BC110669|Fem1a|14154|feminization 1 homolog a (C. elegans)
mm9_v1_chr6_+_134879160_134879183	0.0313817	PAX2.p2	AK012387|1190002F15Rik|381822|RIKEN cDNA 1190002F15 gene
mm9_v1_chr4_+_19502209_19502244	0.0313445	PAX2.p2	NM_025476|Fam82b|66302|family with sequence similarity 82, member B	AK041199|Fam82b|66302|family with sequence similarity 82, member B	BC096046|Fam82b|66302|family with sequence similarity 82, member B
mm9_v1_chr2_+_79475581_79475821	0.0311713	PAX2.p2	AK169543|Ssfa2|70599|sperm specific antigen 2	NM_080558|Ssfa2|70599|sperm specific antigen 2	AB120565|Ssfa2|70599|sperm specific antigen 2	BC141883|Ssfa2|70599|sperm specific antigen 2	BC115799|Ssfa2|70599|sperm specific antigen 2	BC122519|Ssfa2|70599|sperm specific antigen 2	AB093303|Ssfa2|70599|sperm specific antigen 2
mm9_v1_chr7_-_112900699_112900744	0.0310879	PAX2.p2	AJ011912|Tpp1|12751|tripeptidyl peptidase I	BC024820|Tpp1|12751|tripeptidyl peptidase I	AK170781|Tpp1|12751|tripeptidyl peptidase I	AK146759|Tpp1|12751|tripeptidyl peptidase I	AK048279|Tpp1|12751|tripeptidyl peptidase I	NM_009906|Tpp1|12751|tripeptidyl peptidase I	AK083832|Tpp1|12751|tripeptidyl peptidase I	AK169924|Tpp1|12751|tripeptidyl peptidase I	AF111172|Tpp1|12751|tripeptidyl peptidase I	AK155021|Tpp1|12751|tripeptidyl peptidase I	AK002418|Tpp1|12751|tripeptidyl peptidase I	AK165669|Tpp1|12751|tripeptidyl peptidase I
mm9_v1_chr13_-_69138418_69138432	0.0310695	PAX2.p2	AK132312|Adcy2|210044|adenylate cyclase 2	NM_153534|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr4_-_107743887_107743940	0.0308876	PAX2.p2	AK002425|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chr5_-_87766219_87766221	0.0305647	PAX2.p2	AK050327|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3	NM_028094|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3
mm9_v1_chr12_+_25741653_25741728	0.0305635	PAX2.p2	BC059030|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr3_-_107135939_107136206	0.0304553	PAX2.p2	BC080828|Rbm15|229700|RNA binding motif protein 15	AK048987|Rbm15|229700|RNA binding motif protein 15	BC051409|Rbm15|229700|RNA binding motif protein 15	AK168242|Rbm15|229700|RNA binding motif protein 15	AK166271|Rbm15|229700|RNA binding motif protein 15	BC057038|Rbm15|229700|RNA binding motif protein 15	AK220162|Rbm15|229700|RNA binding motif protein 15	AK168936|Rbm15|229700|RNA binding motif protein 15	BC120590|Rbm15|229700|RNA binding motif protein 15	BC137741|Rbm15|229700|RNA binding motif protein 15	NM_001045807|Rbm15|229700|RNA binding motif protein 15
mm9_v1_chr11_-_115794529_115794818	0.0300359	PAX2.p2	BC066176|Recql5|170472|RecQ protein-like 5	BC053086|Recql5|170472|RecQ protein-like 5	BC060070|Recql5|170472|RecQ protein-like 5	BC059000|Recql5|170472|RecQ protein-like 5	AK029060|Recql5|170472|RecQ protein-like 5	AK083513|Recql5|170472|RecQ protein-like 5
mm9_v1_chr13_-_74454677_74454754	0.0300095	PAX2.p2	AK150335|Pdcd6|18570|programmed cell death 6	AK008610|Pdcd6|18570|programmed cell death 6	AK078044|Pdcd6|18570|programmed cell death 6	U49112|Pdcd6|18570|programmed cell death 6	BC040079|Pdcd6|18570|programmed cell death 6	AK028223|Pdcd6|18570|programmed cell death 6	AK147979|Pdcd6|18570|programmed cell death 6
mm9_v1_chr11_-_50051972_50051973	0.0300055	PAX2.p2	BC028760|Ltc4s|17001|leukotriene C4 synthase	NM_008521|Ltc4s|17001|leukotriene C4 synthase	U27195|Ltc4s|17001|leukotriene C4 synthase
mm9_v1_chr15_+_80808194_80808235	0.0299988	PAX2.p2	NM_134091|Sgsm3|105835|small G protein signaling modulator 3	AK142314|Sgsm3|105835|small G protein signaling modulator 3	AK170806|Sgsm3|105835|small G protein signaling modulator 3	BC018197|Sgsm3|105835|small G protein signaling modulator 3	BC024122|Sgsm3|105835|small G protein signaling modulator 3
mm9_v1_chr11_-_103733519_103733644	0.029875	PAX2.p2	AK214505|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK208793|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK203353|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK213251|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK028415|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr10_+_126727846_126727865	0.029846	PAX2.p2	NM_007837|Ddit3|13198|DNA-damage inducible transcript 3	AK028120|Ddit3|13198|DNA-damage inducible transcript 3	AK040004|Ddit3|13198|DNA-damage inducible transcript 3	BC013718|Ddit3|13198|DNA-damage inducible transcript 3
mm9_v1_chr13_-_58375469_58375564	0.0298432	PAX2.p2	BC052347|Gkap1|56278|G kinase anchoring protein 1	NM_019832|Gkap1|56278|G kinase anchoring protein 1
mm9_v1_chr19_-_29596672_29596689	0.0297175	PAX2.p2	
mm9_v1_chr11_-_90252208_90252214	0.0293273	PAX2.p2	BC058705|Hlf|217082|hepatic leukemia factor
mm9_v1_chr8_-_88364760_88364825	0.0292855	PAX2.p2	AK132242|Itfg1|71927|integrin alpha FG-GAP repeat containing 1	BC003977|Itfg1|71927|integrin alpha FG-GAP repeat containing 1	AK141948|Itfg1|71927|integrin alpha FG-GAP repeat containing 1
mm9_v1_chr5_+_22056208_22056261	0.0292366	PAX2.p2	AK006545|1700030G06Rik|69507|RIKEN cDNA 1700030G06 gene	AK029857|6030443J06Rik|320719|RIKEN cDNA 6030443J06 gene	AK044020|1700030G06Rik|69507|RIKEN cDNA 1700030G06 gene	AK030448|6030443J06Rik|320719|RIKEN cDNA 6030443J06 gene
mm9_v1_chr15_+_9365782_9365824	0.0292063	PAX2.p2	AK006467|Capsl|75568|calcyphosine-like	NM_029341|Capsl|75568|calcyphosine-like	BC061015|Capsl|75568|calcyphosine-like
mm9_v1_chr3_-_95558736_95558899	0.0291604	PAX2.p2	AK187935|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164825|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK088675|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC147501|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK011540|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC008995|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK168075|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK142685|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK080690|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164589|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163617|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163618|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163619|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_027931|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr6_-_35276109_35276143	0.0291569	PAX2.p2	BC064033|Fam180a|208164|family with sequence similarity 180, member A	AK045849|Fam180a|208164|family with sequence similarity 180, member A	AK157966|Fam180a|208164|family with sequence similarity 180, member A	NM_173375|Fam180a|208164|family with sequence similarity 180, member A
mm9_v1_chr4_+_43591606_43591606	0.0290841	PAX2.p2	NM_172866|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)
mm9_v1_chr5_-_136386045_136386060	0.029061	PAX2.p2	AK179188|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK181145|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK191464|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr5_+_115018259_115018259	0.0290324	PAX2.p2	BC057022|BC057022|433940|cDNA sequence BC057022	NM_001004180|BC057022|433940|cDNA sequence BC057022
mm9_v1_chr4_-_129255652_129255823	0.0289108	PAX2.p2	AK134621|Fam167b|230766|family with sequence similarity 167, member B	BC030183|Fam167b|230766|family with sequence similarity 167, member B	AK143928|Fam167b|230766|family with sequence similarity 167, member B	NM_182783|Fam167b|230766|family with sequence similarity 167, member B
mm9_v1_chr15_-_103070263_103070286	0.0287672	PAX2.p2	AK008792|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr17_-_85190113_85190128	0.0287592	PAX2.p2	NM_028233|Lrpprc|72416|leucine-rich PPR-motif containing	AK138527|Lrpprc|72416|leucine-rich PPR-motif containing
mm9_v1_chr4_-_134885357_134885401	0.0285933	PAX2.p2	AK219253|Srrm1|51796|serine/arginine repetitive matrix 1
mm9_v1_chr7_-_52147628_52147748	0.0285722	PAX2.p2	AK209813|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	AK089940|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)	NM_029365|Med25|75613|mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)
mm9_v1_chr14_+_58445044_58445266	0.0284355	PAX2.p2	AK010282|Mrp63|67840|mitochondrial ribosomal protein 63	AK011558|Mrp63|67840|mitochondrial ribosomal protein 63	NM_026401|Mrp63|67840|mitochondrial ribosomal protein 63	AK003130|Mrp63|67840|mitochondrial ribosomal protein 63	AB049958|Mrp63|67840|mitochondrial ribosomal protein 63	BC055723|Mrp63|67840|mitochondrial ribosomal protein 63	BC049555|Mrp63|67840|mitochondrial ribosomal protein 63
mm9_v1_chr5_+_110605872_110605990	0.028389	PAX2.p2	AK171773|Golga3|269682|golgi autoantigen, golgin subfamily a, 3	AK133623|Golga3|269682|golgi autoantigen, golgin subfamily a, 3	D78270|Golga3|269682|golgi autoantigen, golgin subfamily a, 3
mm9_v1_chr18_+_61204953_61205094	0.0283369	PAX2.p2	X04367|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide
mm9_v1_chrX_-_140367467_140367853	0.0283358	PAX2.p2	AY560329|Dcx|13193|doublecortin	AK048410|Dcx|13193|doublecortin	AF045547|Dcx|13193|doublecortin	AK164119|Dcx|13193|doublecortin	BC056391|Dcx|13193|doublecortin	AK049050|Dcx|13193|doublecortin	NM_001110222|Dcx|13193|doublecortin	BC057010|Dcx|13193|doublecortin	BC062974|Dcx|13193|doublecortin	AK014264|Dcx|13193|doublecortin	NM_001110223|Dcx|13193|doublecortin	NM_001110224|Dcx|13193|doublecortin	NM_010025|Dcx|13193|doublecortin	AB011678|Dcx|13193|doublecortin
mm9_v1_chr8_+_125000042_125000112	0.0282754	PAX2.p2	NM_153775|Ctu2|66965|cytosolic thiouridylase subunit 2 homolog (S. pombe)	AK012440|Ctu2|66965|cytosolic thiouridylase subunit 2 homolog (S. pombe)	BC036332|Ctu2|66965|cytosolic thiouridylase subunit 2 homolog (S. pombe)	AK090391|Ctu2|66965|cytosolic thiouridylase subunit 2 homolog (S. pombe)	AK154995|Ctu2|66965|cytosolic thiouridylase subunit 2 homolog (S. pombe)	AK172353|Ctu2|66965|cytosolic thiouridylase subunit 2 homolog (S. pombe)
mm9_v1_chr19_-_5424473_5424593	0.0282625	PAX2.p2	AK005445|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)
mm9_v1_chr15_-_36538272_36538277	0.0282358	PAX2.p2	
mm9_v1_chr2_+_173603706_173603746	0.0279848	PAX2.p2	BC024562|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK205322|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK182293|Vapb|56491|vesicle-associated membrane protein, associated protein B and C
mm9_v1_chr6_-_28371572_28371734	0.0278804	PAX2.p2	BC066807|Gcc1|74375|golgi coiled coil 1	AK032253|Gcc1|74375|golgi coiled coil 1	NM_028900|Gcc1|74375|golgi coiled coil 1
mm9_v1_chr15_+_25914202_25914226	0.027837	PAX2.p2	BC006964|Zfp622|52521|zinc finger protein 622
mm9_v1_chr12_+_4082739_4082786	0.0278341	PAX2.p2	AY035893|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr6_+_77193078_77193105	0.0277779	PAX2.p2	AK053364|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr15_+_80085613_80085722	0.0275234	PAX2.p2	AK003001|Atf4|11911|activating transcription factor 4	NM_009716|Atf4|11911|activating transcription factor 4	BC085169|Atf4|11911|activating transcription factor 4
mm9_v1_chr2_+_76244578_76244594	0.0274486	PAX2.p2	AK044411|Osbpl6|99031|oxysterol binding protein-like 6	NM_145525|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr11_+_106889431_106889676	0.027388	PAX2.p2	AK007422|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	NM_001163473|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	BC124997|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	BC125006|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene
mm9_v1_chr11_-_109472715_109472760	0.0272454	PAX2.p2	AK159608|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK170563|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK034907|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1
mm9_v1_chr15_-_79158683_79158800	0.027244	PAX2.p2	NM_001199023|Pla2g6|53357|phospholipase A2, group VI	NM_001199024|Pla2g6|53357|phospholipase A2, group VI	NM_001199025|Pla2g6|53357|phospholipase A2, group VI	NM_016915|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr11_-_61307598_61307719	0.0271042	PAX2.p2	AK219317|Mapk7|23939|mitogen-activated protein kinase 7	AF126161|Mapk7|23939|mitogen-activated protein kinase 7	AK155187|Mapk7|23939|mitogen-activated protein kinase 7	AK148119|Mapk7|23939|mitogen-activated protein kinase 7	BC082315|Mapk7|23939|mitogen-activated protein kinase 7	BC013745|Mapk7|23939|mitogen-activated protein kinase 7	AK082552|Mapk7|23939|mitogen-activated protein kinase 7	AY534740|Mapk7|23939|mitogen-activated protein kinase 7	AB019373|Mapk7|23939|mitogen-activated protein kinase 7	NM_011841|Mapk7|23939|mitogen-activated protein kinase 7	BC051020|Mapk7|23939|mitogen-activated protein kinase 7	BC058096|Mapk7|23939|mitogen-activated protein kinase 7	BC100398|Mapk7|23939|mitogen-activated protein kinase 7
mm9_v1_chr18_+_56899574_56899584	0.0269748	PAX2.p2	
mm9_v1_chr8_-_73121418_73121547	0.0269613	PAX2.p2	
mm9_v1_chr9_+_107489981_107490091	0.0268681	PAX2.p2	AK166130|Ifrd2|15983|interferon-related developmental regulator 2	AK007687|Ifrd2|15983|interferon-related developmental regulator 2	NM_025903|Ifrd2|15983|interferon-related developmental regulator 2	AK156625|Ifrd2|15983|interferon-related developmental regulator 2	AK165967|Ifrd2|15983|interferon-related developmental regulator 2	AK149496|Ifrd2|15983|interferon-related developmental regulator 2	AK166258|Ifrd2|15983|interferon-related developmental regulator 2
mm9_v1_chrX_+_71549202_71549226	0.0268585	PAX2.p2	
mm9_v1_chr2_-_110790259_110790446	0.0268141	PAX2.p2	NM_001128103|Ano3|228432|anoctamin 3	AK045930|Ano3|228432|anoctamin 3	NM_001081556|Ano3|228432|anoctamin 3
mm9_v1_chr7_+_117161839_117161861	0.0268112	PAX2.p2	AK187705|Ipo7|233726|importin 7
mm9_v1_chr11_+_3230733_3230843	0.0268052	PAX2.p2	NM_178149|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK028419|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK029304|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK154842|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK005141|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AK160300|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528081|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC055920|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC079641|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	AF528078|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1	BC028479|Pik3ip1|216505|phosphoinositide-3-kinase interacting protein 1
mm9_v1_chr4_-_9570742_9570800	0.0266821	PAX2.p2	AF302655|Asph|65973|aspartate-beta-hydroxylase	AF302653|Asph|65973|aspartate-beta-hydroxylase	AK009170|Asph|65973|aspartate-beta-hydroxylase	BC128299|Asph|65973|aspartate-beta-hydroxylase	BC152365|Asph|65973|aspartate-beta-hydroxylase	AK028679|Asph|65973|aspartate-beta-hydroxylase	AK017453|Asph|65973|aspartate-beta-hydroxylase	AK014674|Asph|65973|aspartate-beta-hydroxylase	AK030694|Asph|65973|aspartate-beta-hydroxylase	AK009903|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chr2_+_121282819_121282836	0.0265839	PAX2.p2	NM_026318|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	AK003580|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	BC038469|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene	AK009109|2310003F16Rik|67693|RIKEN cDNA 2310003F16 gene
mm9_v1_chr12_-_30212990_30213055	0.0265291	PAX2.p2	
mm9_v1_chr7_+_63305622_63305758	0.0264857	PAX2.p2	AF071173|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2	AF061529|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr11_-_86807216_86807263	0.026374	PAX2.p2	NM_001005341|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr17_-_51318604_51318627	0.0263076	PAX2.p2	AK163366|Tbc1d5|72238|TBC1 domain family, member 5	AK038013|Tbc1d5|72238|TBC1 domain family, member 5
mm9_v1_chr18_+_57693433_57693535	0.0262466	PAX2.p2	AK005868|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene	NM_029290|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene	BC048576|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene	AK019826|1700011I03Rik|75444|RIKEN cDNA 1700011I03 gene
mm9_v1_chr15_+_73578771_73578842	0.0261659	PAX2.p2	AK143702|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK172192|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK014601|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chrX_+_53627743_53627791	0.0261248	PAX2.p2	AK078069|Ncrna00086|320237|non-protein coding RNA 86	AK139449|Ncrna00086|320237|non-protein coding RNA 86	BC052359|Ncrna00086|320237|non-protein coding RNA 86
mm9_v1_chr15_+_100766701_100766755	0.0255893	PAX2.p2	NM_011323|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	U26707|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	AF049617|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha
mm9_v1_chr1_-_137063881_137064000	0.0255137	PAX2.p2	BC127619|Gpr37l1|171469|G protein-coupled receptor 37-like 1	BC127620|Gpr37l1|171469|G protein-coupled receptor 37-like 1	BC098482|Gpr37l1|171469|G protein-coupled receptor 37-like 1	AB016602|Gpr37l1|171469|G protein-coupled receptor 37-like 1
mm9_v1_chr7_+_88138537_88138597	0.0254473	PAX2.p2	AK042675|Zfp592|233410|zinc finger protein 592	NM_178707|Zfp592|233410|zinc finger protein 592	AK143618|Zfp592|233410|zinc finger protein 592	AK129089|Zfp592|233410|zinc finger protein 592
mm9_v1_chr3_+_90318894_90318921	0.0253771	PAX2.p2	X99921|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chrX_+_33428784_33428826	0.0253522	PAX2.p2	AB116935|Dock11|75974|dedicator of cytokinesis 11	NM_001009947|Dock11|75974|dedicator of cytokinesis 11
mm9_v1_chr7_-_107520359_107520405	0.0252641	PAX2.p2	AK146051|Ppme1|72590|protein phosphatase methylesterase 1	BC029064|Ppme1|72590|protein phosphatase methylesterase 1	BC014867|Ppme1|72590|protein phosphatase methylesterase 1	NM_028292|Ppme1|72590|protein phosphatase methylesterase 1
mm9_v1_chr16_+_56477956_56478012	0.0252365	PAX2.p2	AK086582|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014399|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014422|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014423|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014424|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_178790|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK041192|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK043879|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK051214|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC145388|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC150763|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190339|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190340|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190341|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190342|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190343|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein
mm9_v1_chr5_-_5265598_5265717	0.0250171	PAX2.p2	AK087398|Cdk14|18647|cyclin-dependent kinase 14	AK165149|Cdk14|18647|cyclin-dependent kinase 14	U62391|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr5_-_149364273_149364347	0.0247503	PAX2.p2	
mm9_v1_chr5_-_113709569_113709620	0.0247152	PAX2.p2	AK167632|Sgsm1|52850|small G protein signaling modulator 1	AK010756|Sgsm1|52850|small G protein signaling modulator 1	AK051018|Sgsm1|52850|small G protein signaling modulator 1
mm9_v1_chr17_-_45705824_45706064	0.0246716	PAX2.p2	S46109|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr12_+_4082573_4082658	0.0244494	PAX2.p2	NM_153082|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC051140|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	AK049300|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC042643|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr6_+_79969636_79969636	0.0243718	PAX2.p2	NM_178731|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chr3_+_89324085_89324085	0.0243631	PAX2.p2	AK137738|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK170218|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_080466|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm9_v1_chr15_-_102341090_102341132	0.0243075	PAX2.p2	AK166435|Map3k12|26404|mitogen-activated protein kinase kinase kinase 12
mm9_v1_chr15_-_88959056_88959129	0.0240659	PAX2.p2	BC064018|Hdac10|170787|histone deacetylase 10	AK040235|Hdac10|170787|histone deacetylase 10	BC013700|Hdac10|170787|histone deacetylase 10	AK154045|Hdac10|170787|histone deacetylase 10	AK045028|Hdac10|170787|histone deacetylase 10	NM_199198|Hdac10|170787|histone deacetylase 10
mm9_v1_chr8_+_32260775_32260840	0.0240366	PAX2.p2	AK045392|BC019943|234138|cDNA sequence BC019943	NM_001112729|BC019943|234138|cDNA sequence BC019943	NM_144927|BC019943|234138|cDNA sequence BC019943	AK084242|BC019943|234138|cDNA sequence BC019943	AK046031|BC019943|234138|cDNA sequence BC019943	AK139425|BC019943|234138|cDNA sequence BC019943
mm9_v1_chr19_-_19185685_19185685	0.0240046	PAX2.p2	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr12_+_73543228_73543345	0.0238261	PAX2.p2	AK082549|Lrrc9|78257|leucine rich repeat containing 9	AK031279|Lrrc9|78257|leucine rich repeat containing 9	NM_001142729|Lrrc9|78257|leucine rich repeat containing 9	AK039037|Lrrc9|78257|leucine rich repeat containing 9
mm9_v1_chr13_+_75844906_75844941	0.0236963	PAX2.p2	NM_138953|Ell2|192657|elongation factor RNA polymerase II 2
mm9_v1_chr8_+_72315061_72315156	0.0236835	PAX2.p2	BC138721|Atp13a1|170759|ATPase type 13A1	BC138722|Atp13a1|170759|ATPase type 13A1	NM_133224|Atp13a1|170759|ATPase type 13A1	AB035381|Atp13a1|170759|ATPase type 13A1	AK052057|Atp13a1|170759|ATPase type 13A1	BC078635|Atp13a1|170759|ATPase type 13A1
mm9_v1_chrX_-_20508584_20508688	0.0236589	PAX2.p2	AK152782|Cfp|18636|complement factor properdin	AK159609|Cfp|18636|complement factor properdin	AK159853|Cfp|18636|complement factor properdin	AK150212|Cfp|18636|complement factor properdin	AK171374|Cfp|18636|complement factor properdin	BC132369|Cfp|18636|complement factor properdin	BC138306|Cfp|18636|complement factor properdin	AK154306|Cfp|18636|complement factor properdin	AK159291|Cfp|18636|complement factor properdin	NM_008823|Cfp|18636|complement factor properdin
mm9_v1_chr17_+_87153083_87153241	0.0234719	PAX2.p2	AK136911|Epas1|13819|endothelial PAS domain protein 1	NM_010137|Epas1|13819|endothelial PAS domain protein 1	D89787|Epas1|13819|endothelial PAS domain protein 1
mm9_v1_chr10_-_126467848_126467902	0.0234663	PAX2.p2	BC034286|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK020437|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK169164|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK018591|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK141183|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK012240|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK171656|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK172112|Tsfm|66399|Ts translation elongation factor, mitochondrial	BC057904|Tsfm|66399|Ts translation elongation factor, mitochondrial	NM_025537|Tsfm|66399|Ts translation elongation factor, mitochondrial
mm9_v1_chr7_+_31093768_31093831	0.0234537	PAX2.p2	NM_198027|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK082058|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	BC029805|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK170861|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)
mm9_v1_chr11_+_9018007_9018014	0.0234408	PAX2.p2	NM_001159401|Upp1|22271|uridine phosphorylase 1
mm9_v1_chr12_-_32635399_32635399	0.0230501	PAX2.p2	AK133127|Hbp1|73389|high mobility group box transcription factor 1	NM_153198|Hbp1|73389|high mobility group box transcription factor 1	NM_177993|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr2_+_129442079_129442192	0.0230344	PAX2.p2	AK195466|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr17_+_28938070_28938070	0.0227035	PAX2.p2	AK147555|Brpf3|268936|bromodomain and PHD finger containing, 3	NM_001081315|Brpf3|268936|bromodomain and PHD finger containing, 3
mm9_v1_chr1_+_20880692_20880724	0.0225404	PAX2.p2	AK147376|Paqr8|74229|progestin and adipoQ receptor family member VIII	BC059813|Paqr8|74229|progestin and adipoQ receptor family member VIII	NM_028829|Paqr8|74229|progestin and adipoQ receptor family member VIII
mm9_v1_chr9_+_108838660_108838726	0.0225136	PAX2.p2	NM_025407|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1	AK004031|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1	AK160337|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1	AK002292|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1	AK151764|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1	AK010553|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1	AK013128|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1	AK168218|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1	AK167911|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1	BC030064|Uqcrc1|22273|ubiquinol-cytochrome c reductase core protein 1
mm9_v1_chr13_-_19487662_19487670	0.0223891	PAX2.p2	AK030365|Stard3nl|76205|STARD3 N-terminal like	AK152116|Stard3nl|76205|STARD3 N-terminal like
mm9_v1_chr15_-_38448923_38449033	0.0223249	PAX2.p2	BC046814|Azin1|54375|antizyme inhibitor 1	BC021152|Azin1|54375|antizyme inhibitor 1	BC019412|Azin1|54375|antizyme inhibitor 1	AK088112|Azin1|54375|antizyme inhibitor 1	AK088671|Azin1|54375|antizyme inhibitor 1	AK133914|Azin1|54375|antizyme inhibitor 1	AK049680|Azin1|54375|antizyme inhibitor 1	NM_001102458|Azin1|54375|antizyme inhibitor 1	NM_018745|Azin1|54375|antizyme inhibitor 1
mm9_v1_chr11_+_81915343_81915390	0.0222221	PAX2.p2	AK012356|Ccl12|20293|chemokine (C-C motif) ligand 12	NM_011331|Ccl12|20293|chemokine (C-C motif) ligand 12	U50712|Ccl12|20293|chemokine (C-C motif) ligand 12	U66670|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065934|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065935|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065936|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065937|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065938|Ccl12|20293|chemokine (C-C motif) ligand 12	BC027520|Ccl12|20293|chemokine (C-C motif) ligand 12
mm9_v1_chr7_+_19589718_19589775	0.0221985	PAX2.p2	BC019164|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK083013|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1
mm9_v1_chr2_+_34627729_34627749	0.0220886	PAX2.p2	AK151244|Hspa5|14828|heat shock protein 5	D78645|Hspa5|14828|heat shock protein 5
mm9_v1_chr11_-_69571681_69571794	0.022036	PAX2.p2	BC114996|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	NM_009089|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	U37500|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A
mm9_v1_chr11_-_70465629_70465690	0.0219828	PAX2.p2	AJ279848|Pfn1|18643|profilin 1
mm9_v1_chrX_+_162782484_162782852	0.0219785	PAX2.p2	NM_001177955|Gpm6b|14758|glycoprotein m6b	NM_001177956|Gpm6b|14758|glycoprotein m6b	NM_001177957|Gpm6b|14758|glycoprotein m6b	NM_001177958|Gpm6b|14758|glycoprotein m6b	NM_001177959|Gpm6b|14758|glycoprotein m6b	NM_001177960|Gpm6b|14758|glycoprotein m6b	AF254869|Gpm6b|14758|glycoprotein m6b	AF254870|Gpm6b|14758|glycoprotein m6b	AF254872|Gpm6b|14758|glycoprotein m6b	AF254873|Gpm6b|14758|glycoprotein m6b	AF254874|Gpm6b|14758|glycoprotein m6b	AF254875|Gpm6b|14758|glycoprotein m6b	AF254878|Gpm6b|14758|glycoprotein m6b	AF254879|Gpm6b|14758|glycoprotein m6b	AK013660|Gpm6b|14758|glycoprotein m6b	AK140714|Gpm6b|14758|glycoprotein m6b	S65737|Gpm6b|14758|glycoprotein m6b
mm9_v1_chr19_+_43856793_43856893	0.0219392	PAX2.p2	NM_013806|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF227274|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282772|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282773|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2
mm9_v1_chr3_+_114606995_114607339	0.0216542	PAX2.p2	AK049612|Olfm3|229759|olfactomedin 3	AK044605|Olfm3|229759|olfactomedin 3	AK045482|Olfm3|229759|olfactomedin 3	AK038569|Olfm3|229759|olfactomedin 3	AK079315|Olfm3|229759|olfactomedin 3	AK044325|Olfm3|229759|olfactomedin 3	AK137414|Olfm3|229759|olfactomedin 3	AF442825|Olfm3|229759|olfactomedin 3	NM_153458|Olfm3|229759|olfactomedin 3	BC112422|Olfm3|229759|olfactomedin 3	BC113129|Olfm3|229759|olfactomedin 3
mm9_v1_chr3_-_108236057_108236062	0.0215936	PAX2.p2	AK181805|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK190309|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK217331|Sars|20226|seryl-aminoacyl-tRNA synthetase	AK219731|Sars|20226|seryl-aminoacyl-tRNA synthetase
mm9_v1_chr2_-_34708015_34708026	0.0214403	PAX2.p2	AK189840|Psmd5|66998|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
mm9_v1_chr19_+_8994949_8995109	0.0213599	PAX2.p2	AK146264|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK013004|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AB019523|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	BC002103|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	AK219513|B3gat3|72727|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
mm9_v1_chr11_-_61307721_61307780	0.021265	PAX2.p2	BC033598|Mapk7|23939|mitogen-activated protein kinase 7
mm9_v1_chr3_+_137581449_137581573	0.0212306	PAX2.p2	AK151432|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	AK088454|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	AF082526|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	NM_019920|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	AK159450|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	AK162102|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	BC016417|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	BC083155|Lamtor3|56692|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
mm9_v1_chr4_+_98590642_98590668	0.021195	PAX2.p2	BC020007|Usp1|230484|ubiquitin specific peptidase 1
mm9_v1_chr17_-_36053309_36053350	0.0211847	PAX2.p2	AK088540|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK167067|Mrps18b|66973|mitochondrial ribosomal protein S18B	BC021752|Mrps18b|66973|mitochondrial ribosomal protein S18B	NM_025878|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK010250|Mrps18b|66973|mitochondrial ribosomal protein S18B	AB049954|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK168140|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK002554|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK076033|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK076044|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK166597|Mrps18b|66973|mitochondrial ribosomal protein S18B
mm9_v1_chr2_-_122194653_122194653	0.0211262	PAX2.p2	NM_001013829|Shf|435684|Src homology 2 domain containing F
mm9_v1_chr7_-_54051250_54051427	0.0209204	PAX2.p2	BC082542|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001005247|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001005248|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	NM_001167864|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	BC046443|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)
mm9_v1_chrX_-_45866446_45866665	0.0208563	PAX2.p2	AK211196|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AF100927|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AK133764|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	BC003292|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	DQ016499|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	NM_012019|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1
mm9_v1_chr4_+_135842003_135842015	0.0207938	PAX2.p2	AK051031|Zfp46|22704|zinc finger protein 46
mm9_v1_chr8_+_79426245_79426406	0.0207443	PAX2.p2	BC133713|Nr3c2|110784|nuclear receptor subfamily 3, group C, member 2	NM_001083906|Nr3c2|110784|nuclear receptor subfamily 3, group C, member 2
mm9_v1_chr10_+_59764681_59764775	0.0207286	PAX2.p2	AK177739|Psap|19156|prosaposin	AK184913|Psap|19156|prosaposin	AK186657|Psap|19156|prosaposin	AK200316|Psap|19156|prosaposin	AK200829|Psap|19156|prosaposin	AK206879|Psap|19156|prosaposin	AK209964|Psap|19156|prosaposin	AK212335|Psap|19156|prosaposin	AK218028|Psap|19156|prosaposin	AK193227|Psap|19156|prosaposin	AK194685|Psap|19156|prosaposin
mm9_v1_chr2_-_21126852_21126991	0.0207122	PAX2.p2	BC132425|Enkur|71233|enkurin, TRPC channel interacting protein	BC132451|Enkur|71233|enkurin, TRPC channel interacting protein	BC099519|Enkur|71233|enkurin, TRPC channel interacting protein	AY454124|Enkur|71233|enkurin, TRPC channel interacting protein	AK017056|Enkur|71233|enkurin, TRPC channel interacting protein	NM_027728|Enkur|71233|enkurin, TRPC channel interacting protein
mm9_v1_chr2_-_166821559_166821808	0.0206354	PAX2.p2	AK151835|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK152744|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK152269|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK041781|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK159602|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	BC082277|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK167637|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK005002|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK030788|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK030890|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK160979|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK139532|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	BC012959|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK145826|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK159781|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	NM_001109905|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	NM_001109906|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	NM_011490|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AF061942|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)
mm9_v1_chr7_+_134388053_134388144	0.0205246	PAX2.p2	BC139048|Zfp771|244216|zinc finger protein 771	BC139049|Zfp771|244216|zinc finger protein 771	BC145524|Zfp771|244216|zinc finger protein 771
mm9_v1_chr2_+_13995715_13995918	0.020479	PAX2.p2	AK144987|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK169170|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	BC044666|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	NM_011484|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK157767|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK162431|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK163720|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	BC055326|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK163922|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK035924|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK147832|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	U43900|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK179759|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
mm9_v1_chr19_-_31738841_31738908	0.0203567	PAX2.p2	BC113162|Prkg1|19091|protein kinase, cGMP-dependent, type I	AF084547|Prkg1|19091|protein kinase, cGMP-dependent, type I	NM_011160|Prkg1|19091|protein kinase, cGMP-dependent, type I
mm9_v1_chr5_-_44173238_44173428	0.0203037	PAX2.p2	AK183264|Fbxl5|242960|F-box and leucine-rich repeat protein 5	BC113798|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK029957|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK171361|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK150664|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK088067|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK054009|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK082931|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK041497|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK085100|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK159744|Fbxl5|242960|F-box and leucine-rich repeat protein 5	AK171783|Fbxl5|242960|F-box and leucine-rich repeat protein 5	NM_001159963|Fbxl5|242960|F-box and leucine-rich repeat protein 5	NM_178729|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chr2_+_32612744_32612905	0.0202636	PAX2.p2	BC003466|Tor2a|30933|torsin family 2, member A	BC024469|Tor2a|30933|torsin family 2, member A	NM_152800|Tor2a|30933|torsin family 2, member A	AK170979|Tor2a|30933|torsin family 2, member A	AK171247|Tor2a|30933|torsin family 2, member A	AK162719|Tor2a|30933|torsin family 2, member A	AK019246|Tor2a|30933|torsin family 2, member A	AK185253|Tor2a|30933|torsin family 2, member A	AK189495|Tor2a|30933|torsin family 2, member A
mm9_v1_chr5_-_143666425_143666452	0.0201963	PAX2.p2	
mm9_v1_chr16_-_18622449_18622495	0.019948	PAX2.p2	BC138156|Gp1bb|14724|glycoprotein Ib, beta polypeptide	BC145160|Gp1bb|14724|glycoprotein Ib, beta polypeptide	BC053108|Gp1bb|14724|glycoprotein Ib, beta polypeptide	NM_001001999|Gp1bb|14724|glycoprotein Ib, beta polypeptide	NM_010327|Gp1bb|14724|glycoprotein Ib, beta polypeptide
mm9_v1_chr9_-_114549148_114549229	0.0199143	PAX2.p2	AK149944|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK167288|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC025554|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK029103|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	NM_153585|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK080503|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK157824|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr7_+_19876447_19876478	0.0199071	PAX2.p2	NM_001025364|Rtn2|20167|reticulon 2 (Z-band associated protein)	AK160500|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038539|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr1_-_172104899_172104931	0.0198705	PAX2.p2	BC017547|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK171925|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK163314|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1
mm9_v1_chr15_-_98398066_98398161	0.0198429	PAX2.p2	AF087662|Ccnt1|12455|cyclin T1	AF095640|Ccnt1|12455|cyclin T1	AF109179|Ccnt1|12455|cyclin T1	AF113951|Ccnt1|12455|cyclin T1	BC131685|Ccnt1|12455|cyclin T1	BC131686|Ccnt1|12455|cyclin T1	NM_009833|Ccnt1|12455|cyclin T1	AK083037|Ccnt1|12455|cyclin T1
mm9_v1_chr4_+_116799417_116799417	0.0197535	PAX2.p2	AK029345|Tctex1d4|242646|Tctex1 domain containing 4	NM_175030|Tctex1d4|242646|Tctex1 domain containing 4
mm9_v1_chr16_+_10742336_10742473	0.0197283	PAX2.p2	AK028051|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr3_+_66789587_66789619	0.0197264	PAX2.p2	AK012100|Rsrc1|66880|arginine/serine-rich coiled-coil 1	NM_025822|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK005242|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK043731|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK045433|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr2_+_145686480_145686484	0.0197219	PAX2.p2	AK171064|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr6_+_116288075_116288140	0.0196411	PAX2.p2	BC053090|March8|71779|membrane-associated ring finger (C3HC4) 8	NM_027920|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr4_-_46614726_46614844	0.0196224	PAX2.p2	AK045728|Coro2a|107684|coronin, actin binding protein 2A	AK033455|Coro2a|107684|coronin, actin binding protein 2A	AK030971|Coro2a|107684|coronin, actin binding protein 2A	AK154247|Coro2a|107684|coronin, actin binding protein 2A	AK170184|Coro2a|107684|coronin, actin binding protein 2A	AK044060|Coro2a|107684|coronin, actin binding protein 2A	AK152490|Coro2a|107684|coronin, actin binding protein 2A	AK153134|Coro2a|107684|coronin, actin binding protein 2A	AK054394|Coro2a|107684|coronin, actin binding protein 2A	NM_001164804|Coro2a|107684|coronin, actin binding protein 2A
mm9_v1_chr6_-_100237390_100237463	0.0195439	PAX2.p2	AK033024|Rybp|56353|RING1 and YY1 binding protein	AF101779|Rybp|56353|RING1 and YY1 binding protein	BC080287|Rybp|56353|RING1 and YY1 binding protein
mm9_v1_chr11_-_116713532_116713613	0.0193009	PAX2.p2	AF250135|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr12_-_81744771_81744855	0.0192975	PAX2.p2	BC107315|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC107316|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC132421|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC132423|Erh|13877|enhancer of rudimentary homolog (Drosophila)	U66870|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC099476|Erh|13877|enhancer of rudimentary homolog (Drosophila)	U01140|Erh|13877|enhancer of rudimentary homolog (Drosophila)	BC083141|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK171834|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK010451|Erh|13877|enhancer of rudimentary homolog (Drosophila)	D73368|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK168188|Erh|13877|enhancer of rudimentary homolog (Drosophila)	AK080617|Erh|13877|enhancer of rudimentary homolog (Drosophila)	NM_007951|Erh|13877|enhancer of rudimentary homolog (Drosophila)
mm9_v1_chr17_-_26122737_26122740	0.0192414	PAX2.p2	AK143711|Solh|50817|small optic lobes homolog (Drosophila)
mm9_v1_chr7_+_148587559_148587591	0.0192197	PAX2.p2	AK193945|Taldo1|21351|transaldolase 1
mm9_v1_chr11_-_98636511_98636521	0.019173	PAX2.p2	AF291821|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1
mm9_v1_chr7_-_104886756_104886798	0.019166	PAX2.p2	AK075757|Aqp11|66333|aquaporin 11	NM_175105|Aqp11|66333|aquaporin 11	AK006005|Aqp11|66333|aquaporin 11	AK137326|Aqp11|66333|aquaporin 11
mm9_v1_chr14_-_27783615_27783757	0.0191238	PAX2.p2	AK030445|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK045438|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK088080|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AY113705|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK033566|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK146356|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK049307|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	NM_145221|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	BC063751|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm9_v1_chr14_-_106296035_106296070	0.0187787	PAX2.p2	AF176905|Spry2|24064|sprouty homolog 2 (Drosophila)	NM_011897|Spry2|24064|sprouty homolog 2 (Drosophila)
mm9_v1_chrX_+_139952975_139953253	0.0186137	PAX2.p2	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr19_-_58935493_58935515	0.0185993	PAX2.p2	AK165073|Hspa12a|73442|heat shock protein 12A
mm9_v1_chrX_+_71542444_71542520	0.0184802	PAX2.p2	AK220247|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK158956|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK093961|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	BC048241|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK159449|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK168080|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK161631|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK150333|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK166793|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK159612|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AB031290|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1
mm9_v1_chr4_+_43506226_43506287	0.0184694	PAX2.p2	AK004044|Ccdc107|622404|coiled-coil domain containing 107	BC027414|Ccdc107|622404|coiled-coil domain containing 107	AK002915|Ccdc107|622404|coiled-coil domain containing 107	NM_001037913|Ccdc107|622404|coiled-coil domain containing 107
mm9_v1_chr8_+_67471046_67471202	0.0183654	PAX2.p2	AK013998|Tmem192|73067|transmembrane protein 192	NM_001163747|Tmem192|73067|transmembrane protein 192	NM_028427|Tmem192|73067|transmembrane protein 192	AK168146|Tmem192|73067|transmembrane protein 192	AK046181|Tmem192|73067|transmembrane protein 192	AK132619|Tmem192|73067|transmembrane protein 192	BC020157|Tmem192|73067|transmembrane protein 192
mm9_v1_chr6_+_113554785_113554826	0.0182847	PAX2.p2	AK190298|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK193342|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene
mm9_v1_chr7_-_28181562_28181590	0.0182556	PAX2.p2	AB055621|Spnb4|80297|spectrin beta 4
mm9_v1_chr1_+_152239957_152239972	0.0180288	PAX2.p2	AK076012|Tpr|108989|translocated promoter region	NM_133780|Tpr|108989|translocated promoter region
mm9_v1_chr15_+_3230053_3230123	0.0180269	PAX2.p2	
mm9_v1_chr7_-_135604669_135604859	0.0177807	PAX2.p2	AK012085|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	BC056227|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	U55861|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	BC010496|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm9_v1_chr11_-_106642357_106642481	0.017661	PAX2.p2	AK011169|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr11_-_61668486_61668601	0.0176177	PAX2.p2	AF145922|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	BC046778|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	BC053029|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK146620|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK122331|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK146893|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	AK148142|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)	NM_013881|Ulk2|29869|Unc-51 like kinase 2 (C. elegans)
mm9_v1_chr17_+_15080256_15080312	0.0174471	PAX2.p2	BC054359|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK017276|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK018298|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK076476|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	BC071250|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	BC027313|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK197792|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK213665|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK214640|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene	AK218850|1600012H06Rik|67912|RIKEN cDNA 1600012H06 gene
mm9_v1_chr2_+_180315902_180316008	0.0173043	PAX2.p2	BC116732|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC116734|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	NM_028479|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene
mm9_v1_chr16_+_21794392_21794464	0.0172137	PAX2.p2	AK004850|1300002E11Rik|100043489|RIKEN cDNA 1300002E11 gene	AK005305|1300002E11Rik|100043489|RIKEN cDNA 1300002E11 gene	AK031500|1300002E11Rik|100043489|RIKEN cDNA 1300002E11 gene
mm9_v1_chr11_-_101645629_101645660	0.0169827	PAX2.p2	AK144683|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chrX_-_7182450_7182545	0.0169717	PAX2.p2	BC011195|Ccdc22|54638|coiled-coil domain containing 22	AK010536|Ccdc22|54638|coiled-coil domain containing 22	AF229637|Ccdc22|54638|coiled-coil domain containing 22	AK039573|Ccdc22|54638|coiled-coil domain containing 22	NM_138603|Ccdc22|54638|coiled-coil domain containing 22
mm9_v1_chr7_+_90015842_90015842	0.0169711	PAX2.p2	NM_175366|Mex3b|108797|mex3 homolog B (C. elegans)
mm9_v1_chr15_+_74551611_74551685	0.0169703	PAX2.p2	BC047266|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene	NM_198607|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chrX_-_7248403_7248534	0.0168654	PAX2.p2	BC119088|Plp2|18824|proteolipid protein 2	BC119090|Plp2|18824|proteolipid protein 2	NM_019755|Plp2|18824|proteolipid protein 2	AB031292|Plp2|18824|proteolipid protein 2	BC092095|Plp2|18824|proteolipid protein 2	BC083078|Plp2|18824|proteolipid protein 2	AK011282|Plp2|18824|proteolipid protein 2	AK003522|Plp2|18824|proteolipid protein 2	AK154228|Plp2|18824|proteolipid protein 2	AK012816|Plp2|18824|proteolipid protein 2
mm9_v1_chr11_-_102266342_102266375	0.0165957	PAX2.p2	AK211485|Slc25a39|68066|solute carrier family 25, member 39
mm9_v1_chr11_+_62942477_62942539	0.0165473	PAX2.p2	S78568|Pmp22|18858|peripheral myelin protein 22
mm9_v1_chr7_-_85722668_85722860	0.0164421	PAX2.p2	AY336094|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_008746|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	NM_182809|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	BC139764|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035399|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3	AF035400|Ntrk3|18213|neurotrophic tyrosine kinase, receptor, type 3
mm9_v1_chr9_-_20896432_20896440	0.0160264	PAX2.p2	AK079191|Raver1|71766|ribonucleoprotein, PTB-binding 1
mm9_v1_chr2_-_167486889_167487105	0.0159036	PAX2.p2	AK151326|Tmem189|407243|transmembrane protein 189	BC002270|Tmem189|407243|transmembrane protein 189	NM_145538|Tmem189|407243|transmembrane protein 189	AK151705|Tmem189|407243|transmembrane protein 189	AK170042|Tmem189|407243|transmembrane protein 189	AK088196|Tmem189|407243|transmembrane protein 189
mm9_v1_chr10_+_41530379_41530379	0.0158613	PAX2.p2	BC100403|Sesn1|140742|sestrin 1	NM_001162908|Sesn1|140742|sestrin 1
mm9_v1_chr7_-_52997699_52997852	0.0158139	PAX2.p2	AF478566|Sult2b1|54200|sulfotransferase family, cytosolic, 2B, member 1
mm9_v1_chr3_+_96405063_96405082	0.0157678	PAX2.p2	AK051276|Lix1l|280411|Lix1-like
mm9_v1_chr19_-_54019116_54019140	0.0157042	PAX2.p2	AK010048|Bbip1|66360|BBSome interacting protein 1	NM_001195338|Bbip1|66360|BBSome interacting protein 1	NM_001195348|Bbip1|66360|BBSome interacting protein 1
mm9_v1_chr4_+_102242664_102242699	0.0154302	PAX2.p2	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr15_+_6336747_6336872	0.0152063	PAX2.p2	NM_001037905|Dab2|13132|disabled homolog 2 (Drosophila)	NM_001102400|Dab2|13132|disabled homolog 2 (Drosophila)	NM_023118|Dab2|13132|disabled homolog 2 (Drosophila)	AK154716|Dab2|13132|disabled homolog 2 (Drosophila)	AK162744|Dab2|13132|disabled homolog 2 (Drosophila)	AK162851|Dab2|13132|disabled homolog 2 (Drosophila)	AK168375|Dab2|13132|disabled homolog 2 (Drosophila)	U18869|Dab2|13132|disabled homolog 2 (Drosophila)	AK165810|Dab2|13132|disabled homolog 2 (Drosophila)
mm9_v1_chr12_-_86715612_86715842	0.0151877	PAX2.p2	AK150605|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152656|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC064755|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC085097|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK003676|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK084117|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152643|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	NM_026775|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr11_-_51813857_51813993	0.0151177	PAX2.p2	AK010432|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK161008|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	X96859|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	U57690|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK011363|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	BC132075|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	BC132077|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK152316|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK152645|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK153174|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK169229|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK147785|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	NM_009458|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)
mm9_v1_chr9_-_62384766_62384790	0.0150759	PAX2.p2	AK047330|Coro2b|235431|coronin, actin binding protein, 2B	AK047527|Coro2b|235431|coronin, actin binding protein, 2B
mm9_v1_chr11_-_69734574_69734597	0.0150672	PAX2.p2	NM_001166596|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr7_+_97278722_97279067	0.015043	PAX2.p2	AK170373|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC025566|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	NM_146194|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC057683|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC021491|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	AK144960|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC023843|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	AK220291|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC011470|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	AK162360|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	AY206701|Picalm|233489|phosphatidylinositol binding clathrin assembly protein
mm9_v1_chr11_-_97914582_97914775	0.0149939	PAX2.p2	AJ608761|Stac2|217154|SH3 and cysteine rich domain 2	BC029794|Stac2|217154|SH3 and cysteine rich domain 2	AK144433|Stac2|217154|SH3 and cysteine rich domain 2	AK079357|Stac2|217154|SH3 and cysteine rich domain 2	BC024864|Stac2|217154|SH3 and cysteine rich domain 2	AK078132|Stac2|217154|SH3 and cysteine rich domain 2	NM_146028|Stac2|217154|SH3 and cysteine rich domain 2
mm9_v1_chr15_+_25552273_25552341	0.0149212	PAX2.p2	AK028552|Myo10|17909|myosin X	AK089482|Myo10|17909|myosin X	NM_019472|Myo10|17909|myosin X
mm9_v1_chr8_-_122159431_122159579	0.0149067	PAX2.p2	BC043936|Kcng4|66733|potassium voltage-gated channel, subfamily G, member 4	NM_025734|Kcng4|66733|potassium voltage-gated channel, subfamily G, member 4
mm9_v1_chr11_+_115891682_115891695	0.0149056	PAX2.p2	BC054452|Unk|217331|unkempt homolog (Drosophila)
mm9_v1_chr1_-_167523348_167523717	0.01489	PAX2.p2	AK188720|Mpzl1|68481|myelin protein zero-like 1	AK198363|Mpzl1|68481|myelin protein zero-like 1	AK200888|Mpzl1|68481|myelin protein zero-like 1	AK206772|Mpzl1|68481|myelin protein zero-like 1	AK210071|Mpzl1|68481|myelin protein zero-like 1	AK214871|Mpzl1|68481|myelin protein zero-like 1	AK215062|Mpzl1|68481|myelin protein zero-like 1	AK218959|Mpzl1|68481|myelin protein zero-like 1	AK003513|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr17_-_37160143_37160232	0.0147215	PAX2.p2	AY566830|Mog|17441|myelin oligodendrocyte glycoprotein	BC080860|Mog|17441|myelin oligodendrocyte glycoprotein	U64572|Mog|17441|myelin oligodendrocyte glycoprotein	BC050763|Mog|17441|myelin oligodendrocyte glycoprotein	AK135036|Mog|17441|myelin oligodendrocyte glycoprotein
mm9_v1_chr2_+_155343802_155343802	0.0146918	PAX2.p2	AK085932|Acss2|60525|acyl-CoA synthetase short-chain family member 2
mm9_v1_chr11_-_62206116_62206160	0.0145446	PAX2.p2	AK137695|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr8_+_125091889_125091914	0.0145328	PAX2.p2	AF477481|Cdt1|67177|chromatin licensing and DNA replication factor 1	BC048076|Cdt1|67177|chromatin licensing and DNA replication factor 1	NM_026014|Cdt1|67177|chromatin licensing and DNA replication factor 1
mm9_v1_chr12_-_33777667_33777744	0.0145169	PAX2.p2	BC138911|Cdhr3|68764|cadherin-related family member 3	AK047666|Cdhr3|68764|cadherin-related family member 3	AK049806|Cdhr3|68764|cadherin-related family member 3	NM_001024478|Cdhr3|68764|cadherin-related family member 3
mm9_v1_chr13_-_54867800_54867840	0.0143552	PAX2.p2	BC019409|Sncb|104069|synuclein, beta	NM_033610|Sncb|104069|synuclein, beta
mm9_v1_chr12_-_82434150_82434166	0.0143296	PAX2.p2	AK139260|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	AF453257|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	AK044636|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_001167920|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_080440|Slc8a3|110893|solute carrier family 8 (sodium/calcium exchanger), member 3
mm9_v1_chr4_+_135502353_135502412	0.0142725	PAX2.p2	NM_008254|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK144768|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK145251|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK077842|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK132035|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK154033|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	S65036|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	BC025440|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase
mm9_v1_chrX_+_53599573_53599586	0.0142053	PAX2.p2	AK142888|Zfp449|78619|zinc finger protein 449	AK036596|Zfp449|78619|zinc finger protein 449	NM_030139|Zfp449|78619|zinc finger protein 449	AK020600|Zfp449|78619|zinc finger protein 449
mm9_v1_chr17_-_10512217_10512250	0.0141157	PAX2.p2	AK132303|Qk|19317|quaking	NM_001159516|Qk|19317|quaking	NM_001159517|Qk|19317|quaking	NM_021881|Qk|19317|quaking	U44940|Qk|19317|quaking
mm9_v1_chr4_-_124539414_124539476	0.0141139	PAX2.p2	BC065047|Maneal|215090|mannosidase, endo-alpha-like	NM_001007573|Maneal|215090|mannosidase, endo-alpha-like
mm9_v1_chr7_+_135390456_135390509	0.0140494	PAX2.p2	AK158409|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK085042|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK003170|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK087114|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK156423|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	BC002049|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK041233|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143892|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143893|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143894|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1
mm9_v1_chr3_+_115710653_115710683	0.0137701	PAX2.p2	BC094444|Extl2|58193|exostoses (multiple)-like 2
mm9_v1_chr7_-_148040227_148040484	0.0137392	PAX2.p2	BC052402|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	AK003184|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like
mm9_v1_chr1_-_175810248_175810365	0.0137261	PAX2.p2	AK136391|Mndal|100040462|myeloid nuclear differentiation antigen like	NM_001170853|Mndal|100040462|myeloid nuclear differentiation antigen like
mm9_v1_chr9_-_83334633_83334733	0.0135676	PAX2.p2	BC049101|Lca5|75782|Leber congenital amaurosis 5 (human)	BC052060|Lca5|75782|Leber congenital amaurosis 5 (human)	AK047956|Lca5|75782|Leber congenital amaurosis 5 (human)	AK015260|Lca5|75782|Leber congenital amaurosis 5 (human)	AK039510|Lca5|75782|Leber congenital amaurosis 5 (human)	NM_027448|Lca5|75782|Leber congenital amaurosis 5 (human)	NM_029434|Lca5|75782|Leber congenital amaurosis 5 (human)
mm9_v1_chr3_-_27609279_27609407	0.0135349	PAX2.p2	AB098596|Fndc3b|72007|fibronectin type III domain containing 3B	AK147346|Fndc3b|72007|fibronectin type III domain containing 3B	AK220297|Fndc3b|72007|fibronectin type III domain containing 3B	NM_173182|Fndc3b|72007|fibronectin type III domain containing 3B	BC067389|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr14_-_37911383_37911496	0.0133435	PAX2.p2	AF426393|Cdhr1|170677|cadherin-related family member 1	BC042454|Cdhr1|170677|cadherin-related family member 1	AK143151|Cdhr1|170677|cadherin-related family member 1	BC058270|Cdhr1|170677|cadherin-related family member 1	NM_130878|Cdhr1|170677|cadherin-related family member 1
mm9_v1_chr11_-_70051346_70051356	0.0133064	PAX2.p2	BC055357|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr19_+_10917005_10917122	0.0132744	PAX2.p2	AF121080|Slc15a3|65221|solute carrier family 15, member 3	NM_023044|Slc15a3|65221|solute carrier family 15, member 3
mm9_v1_chr5_-_139060952_139060970	0.0132603	PAX2.p2	AB024005|Zfp68|24135|zinc finger protein 68	BC018171|Zfp68|24135|zinc finger protein 68	AK013868|Zfp68|24135|zinc finger protein 68	NM_001044747|Zfp68|24135|zinc finger protein 68	NM_001163797|Zfp68|24135|zinc finger protein 68	NM_013844|Zfp68|24135|zinc finger protein 68
mm9_v1_chr11_+_97699719_97699824	0.0132376	PAX2.p2	
mm9_v1_chr9_+_109834266_109834307	0.0130639	PAX2.p2	NM_008633|Mtap4|17758|microtubule-associated protein 4	AK046825|Mtap4|17758|microtubule-associated protein 4
mm9_v1_chr6_-_145159310_145159555	0.0129039	PAX2.p2	AK132912|Casc1|320662|cancer susceptibility candidate 1	AK039005|Casc1|320662|cancer susceptibility candidate 1	BC120743|Casc1|320662|cancer susceptibility candidate 1	BC125423|Casc1|320662|cancer susceptibility candidate 1	BC144801|Casc1|320662|cancer susceptibility candidate 1	AK034148|Casc1|320662|cancer susceptibility candidate 1	AY423542|Casc1|320662|cancer susceptibility candidate 1	AK082677|Casc1|320662|cancer susceptibility candidate 1	AY485607|Casc1|320662|cancer susceptibility candidate 1	AY485608|Casc1|320662|cancer susceptibility candidate 1	NM_177222|Casc1|320662|cancer susceptibility candidate 1	AK029682|Casc1|320662|cancer susceptibility candidate 1
mm9_v1_chr4_+_126469146_126469183	0.0129022	PAX2.p2	AK177499|AU040320|100317|expressed sequence AU040320
mm9_v1_chr15_-_74686747_74686747	0.0128131	PAX2.p2	BC116908|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2	BC119321|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2	NM_009991|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2
mm9_v1_chr11_+_98725430_98725456	0.0127679	PAX2.p2	AK144539|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr15_+_101904203_101904238	0.012662	PAX2.p2	NM_145625|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr7_-_28013283_28013416	0.0126373	PAX2.p2	AK033605|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C
mm9_v1_chr5_-_92934534_92934693	0.0126118	PAX2.p2	AB008553|Scarb2|12492|scavenger receptor class B, member 2	BC029073|Scarb2|12492|scavenger receptor class B, member 2	AK011123|Scarb2|12492|scavenger receptor class B, member 2	AK149102|Scarb2|12492|scavenger receptor class B, member 2	AK083038|Scarb2|12492|scavenger receptor class B, member 2	NM_007644|Scarb2|12492|scavenger receptor class B, member 2	AK144235|Scarb2|12492|scavenger receptor class B, member 2
mm9_v1_chr10_-_90586419_90586508	0.0125686	PAX2.p2	
mm9_v1_chr6_+_29298117_29298193	0.0123997	PAX2.p2	AK163674|Calu|12321|calumenin	NM_007594|Calu|12321|calumenin	NM_184053|Calu|12321|calumenin	AK035600|Calu|12321|calumenin	BC051423|Calu|12321|calumenin	AK032402|Calu|12321|calumenin	AK147756|Calu|12321|calumenin	AK160795|Calu|12321|calumenin	AK161807|Calu|12321|calumenin	AK166705|Calu|12321|calumenin	AK148178|Calu|12321|calumenin	AY225334|Calu|12321|calumenin	U81829|Calu|12321|calumenin	AK135295|Calu|12321|calumenin
mm9_v1_chr11_-_86922163_86922249	0.0123754	PAX2.p2	AK040348|Prr11|270906|proline rich 11	AK047463|Prr11|270906|proline rich 11	AK083651|Prr11|270906|proline rich 11	NM_175563|Prr11|270906|proline rich 11
mm9_v1_chr12_-_66066481_66066522	0.0123424	PAX2.p2	BC018469|Klhl28|66689|kelch-like 28 (Drosophila)	BC037017|Klhl28|66689|kelch-like 28 (Drosophila)	AK002637|Klhl28|66689|kelch-like 28 (Drosophila)	AK013278|Klhl28|66689|kelch-like 28 (Drosophila)	AK012778|Klhl28|66689|kelch-like 28 (Drosophila)	AK014466|Klhl28|66689|kelch-like 28 (Drosophila)	NM_025707|Klhl28|66689|kelch-like 28 (Drosophila)
mm9_v1_chr4_+_6118235_6118245	0.0121361	PAX2.p2	AK049018|Ubxn2b|68053|UBX domain protein 2B
mm9_v1_chr2_-_35973217_35973333	0.0120039	PAX2.p2	
mm9_v1_chr14_+_56180060_56180205	0.0120004	PAX2.p2	BC008545|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr5_+_3343861_3344038	0.0119778	PAX2.p2	AK154197|Cdk6|12571|cyclin-dependent kinase 6
mm9_v1_chrX_-_20194672_20194682	0.011847	PAX2.p2	BC027265|Ndufb11|104130|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11
mm9_v1_chr1_+_193399604_193399618	0.0118087	PAX2.p2	AK085362|Ints7|77065|integrator complex subunit 7	AK086462|Ints7|77065|integrator complex subunit 7	NM_178632|Ints7|77065|integrator complex subunit 7	AK040344|Ints7|77065|integrator complex subunit 7
mm9_v1_chr1_+_180336011_180336163	0.0113848	PAX2.p2	BC025062|Efcab2|68226|EF-hand calcium binding domain 2	NM_026626|Efcab2|68226|EF-hand calcium binding domain 2	AK018894|Efcab2|68226|EF-hand calcium binding domain 2	AK010880|Efcab2|68226|EF-hand calcium binding domain 2
mm9_v1_chr5_+_108494692_108494781	0.0113405	PAX2.p2	AK031409|Mtf2|17765|metal response element binding transcription factor 2	BC024889|Mtf2|17765|metal response element binding transcription factor 2	AK032798|Mtf2|17765|metal response element binding transcription factor 2	AK032819|Mtf2|17765|metal response element binding transcription factor 2	AK137539|Mtf2|17765|metal response element binding transcription factor 2	BC050826|Mtf2|17765|metal response element binding transcription factor 2	AK030752|Mtf2|17765|metal response element binding transcription factor 2	AB050541|Mtf2|17765|metal response element binding transcription factor 2	BC092237|Mtf2|17765|metal response element binding transcription factor 2	NM_013827|Mtf2|17765|metal response element binding transcription factor 2	BC100340|Mtf2|17765|metal response element binding transcription factor 2	BC029076|Mtf2|17765|metal response element binding transcription factor 2
mm9_v1_chr10_-_114752600_114752678	0.0113089	PAX2.p2	AK172891|Rab21|216344|RAB21, member RAS oncogene family	BC055042|Rab21|216344|RAB21, member RAS oncogene family	NM_024454|Rab21|216344|RAB21, member RAS oncogene family	BC040104|Rab21|216344|RAB21, member RAS oncogene family
mm9_v1_chr17_+_24987429_24987437	0.0112879	PAX2.p2	NM_024284|Hagh|14651|hydroxyacyl glutathione hydrolase
mm9_v1_chr2_-_32942666_32942723	0.0112415	PAX2.p2	BC132143|Garnl3|99326|GTPase activating RANGAP domain-like 3	AK034068|Garnl3|99326|GTPase activating RANGAP domain-like 3	NM_178888|Garnl3|99326|GTPase activating RANGAP domain-like 3
mm9_v1_chr2_+_181501718_181501871	0.0112335	PAX2.p2	AK165786|Myt1|17932|myelin transcription factor 1	NM_001171616|Myt1|17932|myelin transcription factor 1	NM_008665|Myt1|17932|myelin transcription factor 1	AB082378|Myt1|17932|myelin transcription factor 1	AK082994|Myt1|17932|myelin transcription factor 1
mm9_v1_chr8_+_124900542_124900551	0.0111886	PAX2.p2	BC030495|Zc3h18|76014|zinc finger CCCH-type containing 18	AK017933|Zc3h18|76014|zinc finger CCCH-type containing 18
mm9_v1_chr8_+_109580775_109580831	0.0111231	PAX2.p2	AK003739|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	NM_001164472|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	NM_025391|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	BC003972|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	AK006057|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)	AK014290|Nip7|66164|nuclear import 7 homolog (S. cerevisiae)
mm9_v1_chr9_+_107950264_107950349	0.0111133	PAX2.p2	AK180972|Ip6k1|27399|inositol hexaphosphate kinase 1	AK192812|Ip6k1|27399|inositol hexaphosphate kinase 1	AK193720|Ip6k1|27399|inositol hexaphosphate kinase 1	AK196386|Ip6k1|27399|inositol hexaphosphate kinase 1	AK198963|Ip6k1|27399|inositol hexaphosphate kinase 1	AK200277|Ip6k1|27399|inositol hexaphosphate kinase 1	AK213940|Ip6k1|27399|inositol hexaphosphate kinase 1	BC069990|Ip6k1|27399|inositol hexaphosphate kinase 1	BC039929|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chrX_-_147531030_147531085	0.0110095	PAX2.p2	BC037444|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC025008|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	AK044504|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC049668|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_001164578|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_175146|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
mm9_v1_chr2_+_10294062_10294208	0.0109395	PAX2.p2	AK040600|Sfmbt2|353282|Scm-like with four mbt domains 2	NM_001198809|Sfmbt2|353282|Scm-like with four mbt domains 2	NM_177386|Sfmbt2|353282|Scm-like with four mbt domains 2	AK052339|Sfmbt2|353282|Scm-like with four mbt domains 2	BC115510|Sfmbt2|353282|Scm-like with four mbt domains 2	BC115511|Sfmbt2|353282|Scm-like with four mbt domains 2	AK147651|Sfmbt2|353282|Scm-like with four mbt domains 2
mm9_v1_chr19_+_4148636_4148721	0.0109192	PAX2.p2	AK149639|Coro1b|23789|coronin, actin binding protein 1B	AF143956|Coro1b|23789|coronin, actin binding protein 1B	NM_011778|Coro1b|23789|coronin, actin binding protein 1B	BC029326|Coro1b|23789|coronin, actin binding protein 1B	BC131944|Coro1b|23789|coronin, actin binding protein 1B	BC132617|Coro1b|23789|coronin, actin binding protein 1B
mm9_v1_chr11_-_88725811_88725842	0.0108523	PAX2.p2	BC065135|Akap1|11640|A kinase (PRKA) anchor protein 1
mm9_v1_chr19_+_44368576_44368577	0.0106938	PAX2.p2	M26270|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr6_+_145882641_145882808	0.0106627	PAX2.p2	AK162864|Sspn|16651|sarcospan	AK163041|Sspn|16651|sarcospan	AK164430|Sspn|16651|sarcospan	BC021484|Sspn|16651|sarcospan	NM_010656|Sspn|16651|sarcospan	U02487|Sspn|16651|sarcospan	AK148179|Sspn|16651|sarcospan	AK164529|Sspn|16651|sarcospan
mm9_v1_chr11_+_75439670_75439831	0.0105653	PAX2.p2	AK218843|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK214842|Pitpna|18738|phosphatidylinositol transfer protein, alpha
mm9_v1_chr1_+_137662648_137662798	0.0105445	PAX2.p2	NM_013750|Phlda3|27280|pleckstrin homology-like domain, family A, member 3	AK003767|Phlda3|27280|pleckstrin homology-like domain, family A, member 3	BC023376|Phlda3|27280|pleckstrin homology-like domain, family A, member 3	BC023408|Phlda3|27280|pleckstrin homology-like domain, family A, member 3
mm9_v1_chr4_-_63064369_63064478	0.0105302	PAX2.p2	AK170885|Akna|100182|AT-hook transcription factor	AK129468|Akna|100182|AT-hook transcription factor	AK089194|Akna|100182|AT-hook transcription factor	AK159547|Akna|100182|AT-hook transcription factor	NM_001045514|Akna|100182|AT-hook transcription factor
mm9_v1_chr6_+_137703029_137703138	0.0104631	PAX2.p2	AK145820|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK168204|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK012558|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK008033|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK030961|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK075963|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150273|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK169418|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK152462|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK034347|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	BC016218|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK083298|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	NM_172733|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150712|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)
mm9_v1_chr3_+_115710360_115710449	0.0103988	PAX2.p2	NM_001163515|Extl2|58193|exostoses (multiple)-like 2	NM_021388|Extl2|58193|exostoses (multiple)-like 2	AK159281|Extl2|58193|exostoses (multiple)-like 2	AK028677|Extl2|58193|exostoses (multiple)-like 2	AK161866|Extl2|58193|exostoses (multiple)-like 2	BC031438|Extl2|58193|exostoses (multiple)-like 2
mm9_v1_chr17_+_28960526_28960643	0.0103668	PAX2.p2	AK162638|Brpf3|268936|bromodomain and PHD finger containing, 3
mm9_v1_chr9_-_39808834_39808834	0.0103073	PAX2.p2	BC116754|Olfr979|259112|olfactory receptor 979	BC116756|Olfr979|259112|olfactory receptor 979	NM_147108|Olfr979|259112|olfactory receptor 979
mm9_v1_chr1_-_182126032_182126150	0.0101795	PAX2.p2	AK004791|Adck3|67426|aarF domain containing kinase 3	AK014605|Adck3|67426|aarF domain containing kinase 3	BC030937|Adck3|67426|aarF domain containing kinase 3	NM_023341|Adck3|67426|aarF domain containing kinase 3
mm9_v1_chr15_-_9070066_9070213	0.01006	PAX2.p2	AF083215|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK204645|Skp2|27401|S-phase kinase-associated protein 2 (p45)	BC003468|Skp2|27401|S-phase kinase-associated protein 2 (p45)	BC092236|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK167677|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK037002|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK044212|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK166034|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK032979|Skp2|27401|S-phase kinase-associated protein 2 (p45)	BC098371|Skp2|27401|S-phase kinase-associated protein 2 (p45)	NM_013787|Skp2|27401|S-phase kinase-associated protein 2 (p45)	NM_145468|Skp2|27401|S-phase kinase-associated protein 2 (p45)
mm9_v1_chr7_+_134123446_134123464	0.0100397	PAX2.p2	
mm9_v1_chr12_-_86691817_86691869	0.0100179	PAX2.p2	AK191153|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK198152|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK201939|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK206502|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK207697|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK216393|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC006774|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr11_+_73012929_73013003	0.00985503	PAX2.p2	AK015273|Shpk|74637|sedoheptulokinase	AK171027|Shpk|74637|sedoheptulokinase	BC054721|Shpk|74637|sedoheptulokinase	BC056433|Shpk|74637|sedoheptulokinase	NM_029031|Shpk|74637|sedoheptulokinase
mm9_v1_chr14_-_46149660_46149750	0.00984824	PAX2.p2	BC033436|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK079588|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK166552|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK145030|Fermt2|218952|fermitin family homolog 2 (Drosophila)	AK165608|Fermt2|218952|fermitin family homolog 2 (Drosophila)	NM_146054|Fermt2|218952|fermitin family homolog 2 (Drosophila)
mm9_v1_chr10_-_114688440_114688479	0.00984566	PAX2.p2	BC032087|Tbc1d15|66687|TBC1 domain family, member 15	AK010704|Tbc1d15|66687|TBC1 domain family, member 15	DQ054831|Tbc1d15|66687|TBC1 domain family, member 15
mm9_v1_chr8_+_74116052_74116115	0.00980219	PAX2.p2	AK044914|Pgls|66171|6-phosphogluconolactonase	AK003985|Pgls|66171|6-phosphogluconolactonase	AK036059|Pgls|66171|6-phosphogluconolactonase	NM_025396|Pgls|66171|6-phosphogluconolactonase	AK172066|Pgls|66171|6-phosphogluconolactonase	AK003134|Pgls|66171|6-phosphogluconolactonase	AK028344|Pgls|66171|6-phosphogluconolactonase	BC006594|Pgls|66171|6-phosphogluconolactonase
mm9_v1_chr4_-_109125244_109125254	0.0096954	PAX2.p2	AK139182|Rnf11|29864|ring finger protein 11
mm9_v1_chr4_-_125933482_125933589	0.00966826	PAX2.p2	BC023677|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	BC023774|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	AK151613|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_001145970|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_144941|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1
mm9_v1_chr4_+_95224197_95224229	0.00956561	PAX2.p2	NM_001113412|Fggy|75578|FGGY carbohydrate kinase domain containing	AK138439|Fggy|75578|FGGY carbohydrate kinase domain containing	AK082737|Fggy|75578|FGGY carbohydrate kinase domain containing
mm9_v1_chr3_-_90193813_90193859	0.0094513	PAX2.p2	BC141134|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	AK135190|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	AJ577573|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	NM_011988|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	BC060052|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3
mm9_v1_chr8_+_88016492_88016583	0.0094442	PAX2.p2	AK075894|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	AK076250|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	AK031958|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	AK033424|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	NM_173866|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2
mm9_v1_chr8_-_129469710_129469776	0.0094171	PAX2.p2	AK160168|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	BC099449|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	BC002087|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	NM_024214|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	AK002902|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	AK141367|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)
mm9_v1_chr9_-_50885151_50885198	0.00937897	PAX2.p2	AK165695|Layn|244864|layilin	AK086930|Layn|244864|layilin	BC139816|Layn|244864|layilin	NM_001033534|Layn|244864|layilin
mm9_v1_chr15_+_101974616_101974616	0.00930835	PAX2.p2	NM_008344|Igfbp6|16012|insulin-like growth factor binding protein 6
mm9_v1_chr2_+_38441497_38441644	0.00923079	PAX2.p2	AK214670|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK208733|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr3_-_90017553_90017574	0.00915009	PAX2.p2	BC048352|Rps27|57294|ribosomal protein S27	BC027649|Rps27|57294|ribosomal protein S27	BC055693|Rps27|57294|ribosomal protein S27	BC037026|Rps27|57294|ribosomal protein S27	AK014294|Rps27|57294|ribosomal protein S27	AK084058|Rps27|57294|ribosomal protein S27	NM_001190258|Gm9846|100043813|predicted gene 9846	AK088320|Rps27|57294|ribosomal protein S27	AK166551|Rps27|57294|ribosomal protein S27	NM_027015|Rps27|57294|ribosomal protein S27
mm9_v1_chr8_+_88016464_88016489	0.00914035	PAX2.p2	AK082030|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	BC034219|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2
mm9_v1_chr16_-_94592095_94592172	0.00911586	PAX2.p2	NM_001159618|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr5_+_136363769_136363791	0.008883	PAX2.p2	NM_013560|Hspb1|15507|heat shock protein 1
mm9_v1_chr5_-_22939130_22939177	0.00881454	PAX2.p2	AK017143|5031425E22Rik|269630|RIKEN cDNA 5031425E22 gene	AK042126|5031425E22Rik|269630|RIKEN cDNA 5031425E22 gene
mm9_v1_chr13_-_73465894_73465936	0.00877008	PAX2.p2	AK147147|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	BC076501|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	BC059730|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	BC086933|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	NM_010888|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6
mm9_v1_chr18_-_36675393_36675437	0.00876472	PAX2.p2	L07264|Hbegf|15200|heparin-binding EGF-like growth factor	AK145548|Hbegf|15200|heparin-binding EGF-like growth factor	AK160575|Hbegf|15200|heparin-binding EGF-like growth factor	BC089607|Hbegf|15200|heparin-binding EGF-like growth factor	AK052084|Hbegf|15200|heparin-binding EGF-like growth factor
mm9_v1_chr13_-_58227306_58227430	0.00875317	PAX2.p2	BC048746|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr11_+_100948587_100948649	0.00875115	PAX2.p2	NM_001159384|Mlx|21428|MAX-like protein X	NM_001159385|Mlx|21428|MAX-like protein X	NM_011550|Mlx|21428|MAX-like protein X	AK011478|Mlx|21428|MAX-like protein X	BC031380|Mlx|21428|MAX-like protein X	U43607|Mlx|21428|MAX-like protein X	BC038004|Mlx|21428|MAX-like protein X	AK142605|Mlx|21428|MAX-like protein X	AF213670|Mlx|21428|MAX-like protein X	AF213671|Mlx|21428|MAX-like protein X	AF213672|Mlx|21428|MAX-like protein X	U43548|Mlx|21428|MAX-like protein X	AK177451|Mlx|21428|MAX-like protein X
mm9_v1_chr5_+_73684091_73684133	0.00872935	PAX2.p2	AF295357|Ociad1|68095|OCIA domain containing 1	BC006937|Ociad1|68095|OCIA domain containing 1	AY208935|Ociad1|68095|OCIA domain containing 1
mm9_v1_chr18_-_36904173_36904177	0.00868815	PAX2.p2	AK018732|Ndufa2|17991|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2
mm9_v1_chr8_-_125842442_125842449	0.00867067	PAX2.p2	AF208123|Fanca|14087|Fanconi anemia, complementation group A
mm9_v1_chr19_+_44368578_44368583	0.00862026	PAX2.p2	AK083085|Scd2|20250|stearoyl-Coenzyme A desaturase 2
mm9_v1_chr11_+_72609717_72609729	0.0086011	PAX2.p2	AK158924|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1	NM_001045536|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1
mm9_v1_chr11_-_116713389_116713469	0.00855935	PAX2.p2	AF250132|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr11_+_115337029_115337155	0.00853199	PAX2.p2	AK146249|Armc7|276905|armadillo repeat containing 7	AK042345|Armc7|276905|armadillo repeat containing 7
mm9_v1_chr10_-_33816255_33816324	0.00844723	PAX2.p2	AK161070|Fam26e|103511|family with sequence similarity 26, member E	AK052861|Fam26e|103511|family with sequence similarity 26, member E	AK078850|Fam26e|103511|family with sequence similarity 26, member E	BC025893|Fam26e|103511|family with sequence similarity 26, member E	AK085925|Fam26e|103511|family with sequence similarity 26, member E	NM_178908|Fam26e|103511|family with sequence similarity 26, member E
mm9_v1_chr9_+_65062911_65062974	0.00842366	PAX2.p2	BC014731|Parp16|214424|poly (ADP-ribose) polymerase family, member 16
mm9_v1_chr5_-_109058768_109058782	0.00841447	PAX2.p2	AK133581|Gak|231580|cyclin G associated kinase	AK150112|Gak|231580|cyclin G associated kinase	AK166682|Gak|231580|cyclin G associated kinase
mm9_v1_chr8_+_87604638_87604668	0.00840797	PAX2.p2	AK147129|BC056474|414077|cDNA sequence BC056474
mm9_v1_chr8_+_73222913_73223172	0.00833296	PAX2.p2	X15358|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr11_-_103273956_103274013	0.00828244	PAX2.p2	BC053079|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	NM_183034|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK155357|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK157752|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm9_v1_chr6_-_66987377_66987402	0.00826134	PAX2.p2	BC011141|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	AK144900|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	L28177|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	NM_007836|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha
mm9_v1_chr12_-_21423296_21423379	0.00825687	PAX2.p2	BC090838|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	NM_011739|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC110680|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm9_v1_chr2_-_120178819_120178881	0.00808279	PAX2.p2	BC007479|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281050|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281051|Vps39|269338|vacuolar protein sorting 39 (yeast)	AB028844|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK141424|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK038824|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK042253|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK154103|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK170831|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK171008|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK159889|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK160109|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK084743|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_147153|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_178851|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK140041|Vps39|269338|vacuolar protein sorting 39 (yeast)
mm9_v1_chr7_-_104886507_104886549	0.00800738	PAX2.p2	AB028148|Aqp11|66333|aquaporin 11	AK040045|Aqp11|66333|aquaporin 11	BC037088|Aqp11|66333|aquaporin 11	BC068103|Aqp11|66333|aquaporin 11
mm9_v1_chr6_-_13789847_13789902	0.00797232	PAX2.p2	BC065154|Gpr85|64450|G protein-coupled receptor 85	NM_145066|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr19_-_42826956_42827093	0.00787154	PAX2.p2	AK154222|Pyroxd2|74580|pyridine nucleotide-disulphide oxidoreductase domain 2	AK160239|Pyroxd2|74580|pyridine nucleotide-disulphide oxidoreductase domain 2	AK014668|Pyroxd2|74580|pyridine nucleotide-disulphide oxidoreductase domain 2	BC140971|Pyroxd2|74580|pyridine nucleotide-disulphide oxidoreductase domain 2	BC144951|Pyroxd2|74580|pyridine nucleotide-disulphide oxidoreductase domain 2
mm9_v1_chr2_-_155555105_155555210	0.00782826	PAX2.p2	AK075650|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	BC008268|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK149892|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK040560|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK079296|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK166998|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK080636|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK029164|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK155024|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	NM_145537|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2
mm9_v1_chr5_+_104475948_104476060	0.00772111	PAX2.p2	AK158058|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK004444|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK076500|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_028794|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC033921|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm9_v1_chr10_-_128706371_128706376	0.00758736	PAX2.p2	BC104277|Olfr777|258537|olfactory receptor 777	BC104276|Olfr777|258537|olfactory receptor 777	NM_146544|Olfr777|258537|olfactory receptor 777
mm9_v1_chr19_-_44628193_44628261	0.00748256	PAX2.p2	AK212374|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8
mm9_v1_chr2_+_120966144_120966210	0.00742464	PAX2.p2	AK048809|Adal|75894|adenosine deaminase-like	AK016299|Adal|75894|adenosine deaminase-like	AK049697|Adal|75894|adenosine deaminase-like	AK039677|Adal|75894|adenosine deaminase-like	AK044025|Adal|75894|adenosine deaminase-like
mm9_v1_chr4_-_11131570_11131684	0.00740517	PAX2.p2	AK050920|Ints8|72656|integrator complex subunit 8
mm9_v1_chr5_-_137521896_137522032	0.00738907	PAX2.p2	AK002225|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	M62418|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	NM_007457|Ap1s1|11769|adaptor protein complex AP-1, sigma 1	BC052692|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr14_+_73637961_73638071	0.00737635	PAX2.p2	BC145940|Lpar6|67168|lysophosphatidic acid receptor 6	BC145942|Lpar6|67168|lysophosphatidic acid receptor 6
mm9_v1_chr16_-_11909420_11909546	0.0072041	PAX2.p2	BC025476|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK029379|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK032288|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK041329|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	BC034347|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK133977|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK080876|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK049721|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK134718|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	NM_146067|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK029442|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1
mm9_v1_chr6_+_56952293_56952348	0.00708858	PAX2.p2	BC125532|Vmn1r6|171193|vomeronasal 1 receptor 6	BC125534|Vmn1r6|171193|vomeronasal 1 receptor 6	NM_134175|Vmn1r6|171193|vomeronasal 1 receptor 6
mm9_v1_chr5_-_90312358_90312358	0.00708724	PAX2.p2	AK031900|Adamts3|330119|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	NM_001081401|Adamts3|330119|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	NM_177872|Adamts3|330119|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
mm9_v1_chr5_+_89316245_89316323	0.00706433	PAX2.p2	NM_001136260|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_001197147|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_018760|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	HQ204220|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	AF020195|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129863|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC148292|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129864|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4
mm9_v1_chr2_+_25733392_25733397	0.00695318	PAX2.p2	AK033953|Kcnt1|227632|potassium channel, subfamily T, member 1
mm9_v1_chr2_-_88842442_88842446	0.00689494	PAX2.p2	BC127970|Olfr1215|258451|olfactory receptor 1215	NM_146459|Olfr1215|258451|olfactory receptor 1215
mm9_v1_chr1_-_153937097_153937320	0.00685563	PAX2.p2	AK167392|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene	BC034723|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene	BC055912|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene
mm9_v1_chr15_-_98126513_98126591	0.0068134	PAX2.p2	AK036826|Zfp641|239652|zinc finger protein 641	BC111896|Zfp641|239652|zinc finger protein 641	BC112418|Zfp641|239652|zinc finger protein 641	NM_173769|Zfp641|239652|zinc finger protein 641	AK087530|Zfp641|239652|zinc finger protein 641	AK136402|Zfp641|239652|zinc finger protein 641
mm9_v1_chr17_+_34169289_34169362	0.00680165	PAX2.p2	M84818|Rxrb|20182|retinoid X receptor beta	BC019432|Rxrb|20182|retinoid X receptor beta
mm9_v1_chr3_-_115591014_115591051	0.00677335	PAX2.p2	AK081943|A930005H10Rik|68161|RIKEN cDNA A930005H10 gene	AK137339|A930005H10Rik|68161|RIKEN cDNA A930005H10 gene	AK020812|A930005H10Rik|68161|RIKEN cDNA A930005H10 gene
mm9_v1_chr1_+_16095854_16096053	0.00675274	PAX2.p2	AF456767|Rdh10|98711|retinol dehydrogenase 10 (all-trans)	AK149656|Rdh10|98711|retinol dehydrogenase 10 (all-trans)	BC019796|Rdh10|98711|retinol dehydrogenase 10 (all-trans)	NM_133832|Rdh10|98711|retinol dehydrogenase 10 (all-trans)
mm9_v1_chr11_-_98636538_98636646	0.00667961	PAX2.p2	AK041047|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK135640|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	X86010|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK137582|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	NM_145434|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK137398|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK146430|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1
mm9_v1_chr5_+_130007103_130007146	0.00667226	PAX2.p2	NM_172276|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK140369|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK031872|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK088182|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK170748|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC057314|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC034336|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC034665|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC013466|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC036315|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)
mm9_v1_chr4_-_47484780_47484977	0.00664074	PAX2.p2	AK209601|Alg2|56737|asparagine-linked glycosylation 2 homolog (yeast, alpha-1,3-mannosyltransferase)	AK205116|Alg2|56737|asparagine-linked glycosylation 2 homolog (yeast, alpha-1,3-mannosyltransferase)
mm9_v1_chr19_+_23240506_23240595	0.00662321	PAX2.p2	AK187278|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr2_+_152737083_152737087	0.00662242	PAX2.p2	AK079396|Mylk2|228785|myosin, light polypeptide kinase 2, skeletal muscle	NM_001081044|Mylk2|228785|myosin, light polypeptide kinase 2, skeletal muscle
mm9_v1_chr9_-_109986879_109987026	0.00657815	PAX2.p2	AK193613|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr5_-_114292851_114293254	0.0065581	PAX2.p2	AK201602|Coro1c|23790|coronin, actin binding protein 1C
mm9_v1_chr5_+_123093892_123094082	0.00654915	PAX2.p2	AK144585|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038839|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038845|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038887|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_011027|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK171132|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC062808|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC141120|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145211|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145050|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ009823|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489296|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489297|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128303|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128304|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7
mm9_v1_chr18_+_35989376_35989483	0.00654838	PAX2.p2	AK005364|Cxxc5|67393|CXXC finger 5	BC089314|Cxxc5|67393|CXXC finger 5	NM_133687|Cxxc5|67393|CXXC finger 5
mm9_v1_chr3_-_86724773_86724792	0.00649597	PAX2.p2	BC056921|Dclk2|70762|doublecortin-like kinase 2
mm9_v1_chr14_+_21493519_21493615	0.0064467	PAX2.p2	AK036519|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	NM_001168273|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	NM_172596|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	AK011880|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	AK122199|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	BC040370|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)
mm9_v1_chr13_-_12553652_12553838	0.00640925	PAX2.p2	BC040243|Lgals8|56048|lectin, galactose binding, soluble 8	AK004782|Lgals8|56048|lectin, galactose binding, soluble 8	AF218069|Lgals8|56048|lectin, galactose binding, soluble 8	AK029685|Lgals8|56048|lectin, galactose binding, soluble 8	AK145881|Lgals8|56048|lectin, galactose binding, soluble 8	AK146746|Lgals8|56048|lectin, galactose binding, soluble 8	AK083350|Lgals8|56048|lectin, galactose binding, soluble 8	AK075736|Lgals8|56048|lectin, galactose binding, soluble 8	AK148939|Lgals8|56048|lectin, galactose binding, soluble 8	AK155066|Lgals8|56048|lectin, galactose binding, soluble 8
mm9_v1_chr14_+_56503783_56503825	0.0063623	PAX2.p2	AK136301|Khnyn|219094|KH and NYN domain containing	AK033704|Khnyn|219094|KH and NYN domain containing	NM_027143|Khnyn|219094|KH and NYN domain containing	AK047054|Khnyn|219094|KH and NYN domain containing	BC116260|Khnyn|219094|KH and NYN domain containing	BC116261|Khnyn|219094|KH and NYN domain containing
mm9_v1_chr1_-_193399412_193399424	0.00632293	PAX2.p2	NM_029766|Dtl|76843|denticleless homolog (Drosophila)
mm9_v1_chr12_+_17551678_17551699	0.00626974	PAX2.p2	NM_013614|Odc1|18263|ornithine decarboxylase, structural 1
mm9_v1_chr11_-_70832737_70832807	0.00626668	PAX2.p2	AF208064|Derl2|116891|Der1-like domain family, member 2	AK083632|Derl2|116891|Der1-like domain family, member 2	BC005682|Derl2|116891|Der1-like domain family, member 2	AK083725|Derl2|116891|Der1-like domain family, member 2	AK048627|Derl2|116891|Der1-like domain family, member 2	AK077659|Derl2|116891|Der1-like domain family, member 2	AK082564|Derl2|116891|Der1-like domain family, member 2	NM_033562|Derl2|116891|Der1-like domain family, member 2	AK090105|Derl2|116891|Der1-like domain family, member 2
mm9_v1_chr13_-_99585403_99585403	0.00624614	PAX2.p2	AK031041|Fcho2|218503|FCH domain only 2	NM_172591|Fcho2|218503|FCH domain only 2
mm9_v1_chr16_-_11137100_11137212	0.00615293	PAX2.p2	AK218593|Zc3h7a|106205|zinc finger CCCH type containing 7 A
mm9_v1_chr16_+_34921598_34921714	0.00613807	PAX2.p2	AY237727|Mylk|107589|myosin, light polypeptide kinase	BC045197|Mylk|107589|myosin, light polypeptide kinase	AK078556|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr15_+_82005685_82005731	0.00612469	PAX2.p2	AK197179|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr2_-_26244767_26244830	0.00610311	PAX2.p2	BC031199|Sdccag3|68112|serologically defined colon cancer antigen 3	AK014885|Sdccag3|68112|serologically defined colon cancer antigen 3	BC061037|Sdccag3|68112|serologically defined colon cancer antigen 3	AK082787|Sdccag3|68112|serologically defined colon cancer antigen 3	AK163690|Sdccag3|68112|serologically defined colon cancer antigen 3	AK021273|Sdccag3|68112|serologically defined colon cancer antigen 3	BC005612|Sdccag3|68112|serologically defined colon cancer antigen 3
mm9_v1_chr15_+_55083779_55083879	0.00599674	PAX2.p2	AK170208|Deptor|97998|DEP domain containing MTOR-interacting protein
mm9_v1_chr17_+_17539635_17539669	0.00595324	PAX2.p2	BC049574|Lix1|66643|limb expression 1 homolog (chicken)	NM_025681|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr8_+_11556679_11556909	0.00587897	PAX2.p2	BC147770|Ing1|26356|inhibitor of growth family, member 1	BC147784|Ing1|26356|inhibitor of growth family, member 1	AB221554|Ing1|26356|inhibitor of growth family, member 1	AF149820|Ing1|26356|inhibitor of growth family, member 1
mm9_v1_chrX_-_53851108_53851245	0.00573162	PAX2.p2	AK043524|Mmgt1|236792|membrane magnesium transporter 1	BC032271|Mmgt1|236792|membrane magnesium transporter 1	AK163269|Mmgt1|236792|membrane magnesium transporter 1
mm9_v1_chr8_+_108703001_108703015	0.00562549	PAX2.p2	BC038404|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
mm9_v1_chr19_+_45081114_45081218	0.00562363	PAX2.p2	AK146244|Peo1|226153|progressive external ophthalmoplegia 1 (human)
mm9_v1_chr8_+_72853663_72853663	0.00559178	PAX2.p2	M57639|Gdf1|14559|growth differentiation factor 1	NM_008107|Gdf1|14559|growth differentiation factor 1
mm9_v1_chr12_+_62624880_62624934	0.00556451	PAX2.p2	AK220546|Lrfn5|238205|leucine rich repeat and fibronectin type III domain containing 5
mm9_v1_chr3_+_9403021_9403077	0.00549149	PAX2.p2	AK039918|C030034L19Rik|320088|RIKEN cDNA C030034L19 gene	AK053975|C030034L19Rik|320088|RIKEN cDNA C030034L19 gene	AK081263|C030034L19Rik|320088|RIKEN cDNA C030034L19 gene	AK030949|C030034L19Rik|320088|RIKEN cDNA C030034L19 gene
mm9_v1_chr17_+_28314346_28314398	0.00547944	PAX2.p2	AK028222|Zfp523|224656|zinc finger protein 523	NM_172617|Zfp523|224656|zinc finger protein 523	BC025615|Zfp523|224656|zinc finger protein 523
mm9_v1_chr19_+_5689759_5689887	0.00544674	PAX2.p2	BC047152|Map3k11|26403|mitogen-activated protein kinase kinase kinase 11
mm9_v1_chr16_-_4964233_4964329	0.0054327	PAX2.p2	BC050929|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3	AK012494|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3	BC051143|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3	AK089037|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3	NM_028301|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3
mm9_v1_chr14_+_34767188_34767245	0.00527714	PAX2.p2	BC083133|Rbp3|19661|retinol binding protein 3, interstitial	BC017610|Rbp3|19661|retinol binding protein 3, interstitial	NM_015745|Rbp3|19661|retinol binding protein 3, interstitial	BC040282|Rbp3|19661|retinol binding protein 3, interstitial	BC042480|Rbp3|19661|retinol binding protein 3, interstitial
mm9_v1_chr1_+_89346303_89346444	0.0052753	PAX2.p2	AK044009|Gigyf2|227331|GRB10 interacting GYF protein 2
mm9_v1_chr2_+_122591075_122591156	0.00525031	PAX2.p2	AK075598|Sqrdl|59010|sulfide quinone reductase-like (yeast)	NM_001162503|Sqrdl|59010|sulfide quinone reductase-like (yeast)	AK149948|Sqrdl|59010|sulfide quinone reductase-like (yeast)	AK008290|Sqrdl|59010|sulfide quinone reductase-like (yeast)	BC028247|Sqrdl|59010|sulfide quinone reductase-like (yeast)	BC011153|Sqrdl|59010|sulfide quinone reductase-like (yeast)
mm9_v1_chr9_+_82723591_82723695	0.00524521	PAX2.p2	AK076594|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK013036|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK045436|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	BC046301|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	BC061099|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AF093135|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK014712|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK020448|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr12_-_42212337_42212337	0.0051999	PAX2.p2	BC069041|Lrrn3|16981|leucine rich repeat protein 3, neuronal	NM_010733|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr11_-_108204983_108205101	0.00513095	PAX2.p2	BC096493|Prkca|18750|protein kinase C, alpha
mm9_v1_chr15_+_10994444_10994583	0.0051265	PAX2.p2	AK145096|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK135354|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	NM_175501|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK054015|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK048612|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm9_v1_chr10_-_42198203_42198370	0.00512044	PAX2.p2	AF520417|Lace1|215951|lactation elevated 1	AK170996|Lace1|215951|lactation elevated 1	BC089595|Lace1|215951|lactation elevated 1	AK044595|Lace1|215951|lactation elevated 1	NM_145743|Lace1|215951|lactation elevated 1
mm9_v1_chr2_-_77357674_77357722	0.00504455	PAX2.p2	AK078551|Zfp385b|241494|zinc finger protein 385B	AK050293|Zfp385b|241494|zinc finger protein 385B	NM_001113400|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr14_-_70107206_70107408	0.00502036	PAX2.p2	BC052536|R3hcc1|71843|R3H domain and coiled-coil containing 1	BC059860|R3hcc1|71843|R3H domain and coiled-coil containing 1	AK032854|R3hcc1|71843|R3H domain and coiled-coil containing 1	AK156843|R3hcc1|71843|R3H domain and coiled-coil containing 1	NM_001146012|R3hcc1|71843|R3H domain and coiled-coil containing 1
mm9_v1_chr2_-_13977502_13977510	0.00499334	PAX2.p2	AK010119|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	AK076818|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
mm9_v1_chr16_-_57754816_57754849	0.00476039	PAX2.p2	BC011061|Col8a1|12837|collagen, type VIII, alpha 1	BC058281|Col8a1|12837|collagen, type VIII, alpha 1	AK159542|Col8a1|12837|collagen, type VIII, alpha 1	AK029203|Col8a1|12837|collagen, type VIII, alpha 1	AK018742|Col8a1|12837|collagen, type VIII, alpha 1	AK032048|Col8a1|12837|collagen, type VIII, alpha 1	AK046370|Col8a1|12837|collagen, type VIII, alpha 1	NM_007739|Col8a1|12837|collagen, type VIII, alpha 1
mm9_v1_chr11_-_55125758_55125758	0.00464025	PAX2.p2	NM_001029988|Fat2|245827|FAT tumor suppressor homolog 2 (Drosophila)
mm9_v1_chrX_-_100958883_100958891	0.00463557	PAX2.p2	BC158129|Gm6222|621381|predicted pseudogene 6222	NM_001170979|Gm6222|621381|predicted pseudogene 6222
mm9_v1_chr14_-_73762933_73762949	0.00463294	PAX2.p2	AK002796|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr13_+_58909648_58909697	0.00460751	PAX2.p2	BC052014|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr4_-_134773161_134773181	0.00453978	PAX2.p2	AK195597|Clic4|29876|chloride intracellular channel 4 (mitochondrial)	AK203584|Clic4|29876|chloride intracellular channel 4 (mitochondrial)
mm9_v1_chr15_+_79059603_79059603	0.00453605	PAX2.p2	NM_008837|Pick1|18693|protein interacting with C kinase 1
mm9_v1_chr14_-_61664997_61665146	0.00450008	PAX2.p2	AK028146|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19	AF167554|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19
mm9_v1_chr11_+_78085325_78085440	0.00445047	PAX2.p2	BC040464|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene
mm9_v1_chr1_+_95405907_95405920	0.00442389	PAX2.p2	
mm9_v1_chr11_+_49074089_49074182	0.00440959	PAX2.p2	
mm9_v1_chr5_+_119214502_119214629	0.00434692	PAX2.p2	AK018557|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr3_+_116215963_116215996	0.00432715	PAX2.p2	AK165959|Dbt|13171|dihydrolipoamide branched chain transacylase E2	NM_010022|Dbt|13171|dihydrolipoamide branched chain transacylase E2
mm9_v1_chr2_+_22478131_22478182	0.00432	PAX2.p2	BC018380|Gad2|14417|glutamic acid decarboxylase 2	AK136834|Gad2|14417|glutamic acid decarboxylase 2	AF326549|Gad2|14417|glutamic acid decarboxylase 2	AF326550|Gad2|14417|glutamic acid decarboxylase 2
mm9_v1_chr7_-_52409783_52409953	0.00431818	PAX2.p2	AK209303|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK220200|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK169346|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK030673|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK144967|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK151691|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	BC013548|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	NM_145954|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK144995|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK161198|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK170276|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK164374|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1
mm9_v1_chr5_-_107718388_107718399	0.00424229	PAX2.p2	AF039601|Tgfbr3|21814|transforming growth factor, beta receptor III
mm9_v1_chr18_+_35750406_35750586	0.00417538	PAX2.p2	AK139050|Matr3|17184|matrin 3	AK084822|Matr3|17184|matrin 3	AK148059|Matr3|17184|matrin 3
mm9_v1_chr9_-_56483379_56483515	0.00414753	PAX2.p2	AK034084|Lingo1|235402|leucine rich repeat and Ig domain containing 1
mm9_v1_chr6_+_124989841_124989878	0.00401436	PAX2.p2	AK046126|Ing4|28019|inhibitor of growth family, member 4	AK050522|Ing4|28019|inhibitor of growth family, member 4	AK031633|Ing4|28019|inhibitor of growth family, member 4	AK002821|Ing4|28019|inhibitor of growth family, member 4	AK009267|Ing4|28019|inhibitor of growth family, member 4	NM_133345|Ing4|28019|inhibitor of growth family, member 4	BC009127|Ing4|28019|inhibitor of growth family, member 4	AY035880|Ing4|28019|inhibitor of growth family, member 4	AY035881|Ing4|28019|inhibitor of growth family, member 4	AY036107|Ing4|28019|inhibitor of growth family, member 4
mm9_v1_chr5_+_130535973_130536156	0.00399187	PAX2.p2	
mm9_v1_chr5_+_13125413_13125592	0.00395181	PAX2.p2	AK166127|LOC100503462|100503462|hypothetical LOC100503462	AK052051|LOC100503462|100503462|hypothetical LOC100503462
mm9_v1_chr19_+_53674862_53674958	0.0038265	PAX2.p2	AK165878|Smc3|13006|structural maintenace of chromosomes 3	NM_007790|Smc3|13006|structural maintenace of chromosomes 3	AK164387|Smc3|13006|structural maintenace of chromosomes 3	AK143996|Smc3|13006|structural maintenace of chromosomes 3	AK140705|Smc3|13006|structural maintenace of chromosomes 3	BC062935|Smc3|13006|structural maintenace of chromosomes 3	AF141294|Smc3|13006|structural maintenace of chromosomes 3	AF047601|Smc3|13006|structural maintenace of chromosomes 3
mm9_v1_chr13_-_93914519_93914678	0.0038187	PAX2.p2	AK010195|Cmya5|76469|cardiomyopathy associated 5	AJ575748|Cmya5|76469|cardiomyopathy associated 5	NM_023821|Cmya5|76469|cardiomyopathy associated 5
mm9_v1_chr3_-_96024766_96024802	0.00366398	PAX2.p2	NM_175662|Hist2h2ac|319176|histone cluster 2, H2ac	BC117094|Hist2h2ac|319176|histone cluster 2, H2ac	BC117096|Hist2h2ac|319176|histone cluster 2, H2ac
mm9_v1_chr19_+_5425119_5425264	0.00352325	PAX2.p2	NM_134149|AI837181|107242|expressed sequence AI837181	BC024516|AI837181|107242|expressed sequence AI837181	BC017542|AI837181|107242|expressed sequence AI837181	U64690|AI837181|107242|expressed sequence AI837181
mm9_v1_chr15_+_78427476_78427603	0.00346625	PAX2.p2	NM_028195|Cyth4|72318|cytohesin 4	BC139054|Cyth4|72318|cytohesin 4	BC139056|Cyth4|72318|cytohesin 4	BC145528|Cyth4|72318|cytohesin 4	AK220198|Cyth4|72318|cytohesin 4	AF079972|Cyth4|72318|cytohesin 4	AK036679|Cyth4|72318|cytohesin 4	AK152306|Cyth4|72318|cytohesin 4	AK157026|Cyth4|72318|cytohesin 4	AK152909|Cyth4|72318|cytohesin 4	AK030956|Cyth4|72318|cytohesin 4	AK151402|Cyth4|72318|cytohesin 4	BC018505|Cyth4|72318|cytohesin 4
mm9_v1_chr9_+_113721698_113721717	0.00344044	PAX2.p2	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr2_-_91864276_91864398	0.00338121	PAX2.p2	AB017614|Creb3l1|26427|cAMP responsive element binding protein 3-like 1	BC016447|Creb3l1|26427|cAMP responsive element binding protein 3-like 1	AK142368|Creb3l1|26427|cAMP responsive element binding protein 3-like 1	NM_011957|Creb3l1|26427|cAMP responsive element binding protein 3-like 1
mm9_v1_chr11_+_85166665_85166722	0.00333794	PAX2.p2	NM_001166642|Bcas3|192197|breast carcinoma amplified sequence 3	NM_001166643|Bcas3|192197|breast carcinoma amplified sequence 3	NM_138681|Bcas3|192197|breast carcinoma amplified sequence 3	AK034117|Bcas3|192197|breast carcinoma amplified sequence 3	AF313800|Bcas3|192197|breast carcinoma amplified sequence 3	BC050233|Bcas3|192197|breast carcinoma amplified sequence 3	AK160127|Bcas3|192197|breast carcinoma amplified sequence 3	BC028339|Bcas3|192197|breast carcinoma amplified sequence 3	BC086693|Bcas3|192197|breast carcinoma amplified sequence 3	BC060690|Bcas3|192197|breast carcinoma amplified sequence 3	AK171964|Bcas3|192197|breast carcinoma amplified sequence 3	AK032423|Bcas3|192197|breast carcinoma amplified sequence 3	AK157222|Bcas3|192197|breast carcinoma amplified sequence 3	BC038173|Bcas3|192197|breast carcinoma amplified sequence 3
mm9_v1_chr7_+_4095117_4095396	0.00330357	PAX2.p2	BC034448|Leng8|232798|leukocyte receptor cluster (LRC) member 8
mm9_v1_chr8_+_13705888_13705888	0.00328566	PAX2.p2	AK038767|4932443I19Rik|403185|RIKEN cDNA 4932443I19 gene	NM_001101519|4932443I19Rik|403185|RIKEN cDNA 4932443I19 gene
mm9_v1_chr4_-_101028734_101028813	0.00310301	PAX2.p2	AK021368|E130102H24Rik|77866|RIKEN cDNA E130102H24 gene
mm9_v1_chr8_-_74116341_74116362	0.0030888	PAX2.p2	AK080749|Pgls|66171|6-phosphogluconolactonase
mm9_v1_chr12_-_104116486_104116492	0.00304469	PAX2.p2	BC057303|Btbd7|238386|BTB (POZ) domain containing 7
mm9_v1_chr5_-_123411478_123411530	0.0030381	PAX2.p2	
mm9_v1_chr4_-_140674616_140674640	0.00298584	PAX2.p2	
mm9_v1_chr3_-_72860864_72860987	0.0029514	PAX2.p2	BC066059|Slitrk3|386750|SLIT and NTRK-like family, member 3	NM_198864|Slitrk3|386750|SLIT and NTRK-like family, member 3	AK139378|Slitrk3|386750|SLIT and NTRK-like family, member 3
mm9_v1_chr3_-_88964022_88964062	0.00292368	PAX2.p2	BC039156|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3	BC138319|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3	BC138321|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm9_v1_chr2_-_5597038_5597091	0.00288195	PAX2.p2	AY273822|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr12_+_73885063_73885417	0.00288146	PAX2.p2	AK178989|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform	AK181077|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform
mm9_v1_chr4_+_40895538_40895624	0.00285603	PAX2.p2	AK147058|Chmp5|76959|chromatin modifying protein 5	BC080673|Chmp5|76959|chromatin modifying protein 5	AK008911|Chmp5|76959|chromatin modifying protein 5	NM_029814|Chmp5|76959|chromatin modifying protein 5	BC058756|Chmp5|76959|chromatin modifying protein 5	BC006947|Chmp5|76959|chromatin modifying protein 5
mm9_v1_chr12_+_73542852_73542935	0.00283905	PAX2.p2	AK029802|Lrrc9|78257|leucine rich repeat containing 9	NM_001142728|Lrrc9|78257|leucine rich repeat containing 9	NM_030070|Lrrc9|78257|leucine rich repeat containing 9	AK019545|Lrrc9|78257|leucine rich repeat containing 9	AK015292|Lrrc9|78257|leucine rich repeat containing 9
mm9_v1_chr11_-_98590680_98590748	0.00272199	PAX2.p2	AF126543|Med24|23989|mediator complex subunit 24	AK193218|Med24|23989|mediator complex subunit 24	AK020269|Med24|23989|mediator complex subunit 24	AK154618|Med24|23989|mediator complex subunit 24	AK158385|Med24|23989|mediator complex subunit 24	NM_011869|Med24|23989|mediator complex subunit 24
mm9_v1_chr2_+_162769136_162769210	0.00268633	PAX2.p2	BC116639|L3mbtl|241764|l(3)mbt-like (Drosophila)	NM_001081338|L3mbtl|241764|l(3)mbt-like (Drosophila)	AK049859|L3mbtl|241764|l(3)mbt-like (Drosophila)	AJ875399|L3mbtl|241764|l(3)mbt-like (Drosophila)	AJ875400|L3mbtl|241764|l(3)mbt-like (Drosophila)	AJ875401|L3mbtl|241764|l(3)mbt-like (Drosophila)
mm9_v1_chr5_+_115994255_115994483	0.00263771	PAX2.p2	AF293883|Pxn|19303|paxillin	AK191714|Pxn|19303|paxillin	AK209978|Pxn|19303|paxillin
mm9_v1_chr7_+_51720804_51720838	0.00256104	PAX2.p2	AK002587|Aspdh|68352|aspartate dehydrogenase domain containing	NM_026690|Aspdh|68352|aspartate dehydrogenase domain containing	BC019451|Aspdh|68352|aspartate dehydrogenase domain containing
mm9_v1_chr16_-_35313780_35313815	0.00244105	PAX2.p2	AK085223|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	AK164647|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)
mm9_v1_chr3_+_52845510_52845631	0.00237322	PAX2.p2	AK034532|Lhfp|108927|lipoma HMGIC fusion partner
mm9_v1_chr14_-_73762840_73762848	0.00236456	PAX2.p2	AK205546|Itm2b|16432|integral membrane protein 2B	AK205709|Itm2b|16432|integral membrane protein 2B	AK209176|Itm2b|16432|integral membrane protein 2B	AK215843|Itm2b|16432|integral membrane protein 2B	AK217202|Itm2b|16432|integral membrane protein 2B	AK218926|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr7_-_123586952_123586976	0.00235778	PAX2.p2	AK163446|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK049609|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	U52193|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK019194|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK140908|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	NM_011083|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm9_v1_chr9_-_4309324_4309443	0.0023558	PAX2.p2	AK188246|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
mm9_v1_chr11_-_73012493_73012562	0.00232063	PAX2.p2	BC005479|Ctns|83429|cystinosis, nephropathic	BC006033|Ctns|83429|cystinosis, nephropathic	AK079295|Ctns|83429|cystinosis, nephropathic	AK137143|Ctns|83429|cystinosis, nephropathic	NM_031251|Ctns|83429|cystinosis, nephropathic	AK078511|Ctns|83429|cystinosis, nephropathic	AK170790|Ctns|83429|cystinosis, nephropathic	AK054467|Ctns|83429|cystinosis, nephropathic	AK085517|Ctns|83429|cystinosis, nephropathic	AK170828|Ctns|83429|cystinosis, nephropathic
mm9_v1_chr5_-_92776160_92776261	0.00231261	PAX2.p2	AK152838|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chr7_-_52636108_52636121	0.00230843	PAX2.p2	BC002169|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)
mm9_v1_chr2_+_52716901_52716906	0.00229656	PAX2.p2	NM_172409|Fmnl2|71409|formin-like 2
mm9_v1_chr7_+_3655602_3655652	0.00227551	PAX2.p2	AK081889|Rps9|76846|ribosomal protein S9	AK151621|Rps9|76846|ribosomal protein S9	AK050591|Rps9|76846|ribosomal protein S9	AK150988|Rps9|76846|ribosomal protein S9	NM_029767|Rps9|76846|ribosomal protein S9	AK151029|Rps9|76846|ribosomal protein S9	AK150800|Rps9|76846|ribosomal protein S9	BC031746|Rps9|76846|ribosomal protein S9
mm9_v1_chr1_-_146096156_146096233	0.00221575	PAX2.p2	BC052684|Rgs1|50778|regulator of G-protein signaling 1	AF215667|Rgs1|50778|regulator of G-protein signaling 1	BC028634|Rgs1|50778|regulator of G-protein signaling 1	AK154841|Rgs1|50778|regulator of G-protein signaling 1	AK170366|Rgs1|50778|regulator of G-protein signaling 1	AK089293|Rgs1|50778|regulator of G-protein signaling 1	AK138688|Rgs1|50778|regulator of G-protein signaling 1	AK154394|Rgs1|50778|regulator of G-protein signaling 1	AK170957|Rgs1|50778|regulator of G-protein signaling 1	AK171306|Rgs1|50778|regulator of G-protein signaling 1	NM_015811|Rgs1|50778|regulator of G-protein signaling 1
mm9_v1_chr2_+_148515898_148515954	0.00221147	PAX2.p2	AK208985|Gzf1|74533|GDNF-inducible zinc finger protein 1
mm9_v1_chr19_+_3851772_3851838	0.00220288	PAX2.p2	AK005057|Chka|12660|choline kinase alpha	NM_001025566|Chka|12660|choline kinase alpha	NM_013490|Chka|12660|choline kinase alpha	AK014174|Chka|12660|choline kinase alpha	BC060218|Chka|12660|choline kinase alpha	AK052056|Chka|12660|choline kinase alpha	AK053818|Chka|12660|choline kinase alpha	AK166465|Chka|12660|choline kinase alpha	AK166641|Chka|12660|choline kinase alpha
mm9_v1_chr10_-_39971060_39971064	0.00215601	PAX2.p2	AK185766|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha
mm9_v1_chr15_+_78859949_78859971	0.00214209	PAX2.p2	
mm9_v1_chr1_-_75250520_75250549	0.00213028	PAX2.p2	BC064020|Ptprn|19275|protein tyrosine phosphatase, receptor type, N
mm9_v1_chr7_+_4874178_4874216	0.00210482	PAX2.p2	AK078272|Nat14|269854|N-acetyltransferase 14	BC047219|Nat14|269854|N-acetyltransferase 14
mm9_v1_chr15_-_97976050_97976072	0.00209898	PAX2.p2	BC025106|Asb8|78541|ankyrin repeat and SOCS box-containing 8	AF398969|Asb8|78541|ankyrin repeat and SOCS box-containing 8	AK021239|Asb8|78541|ankyrin repeat and SOCS box-containing 8
mm9_v1_chr2_+_118752232_118752411	0.00209594	PAX2.p2	NM_028117|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154555|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK155115|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC043700|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154636|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK159357|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK011230|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC085479|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK171614|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC026886|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
mm9_v1_chr15_-_102062331_102062365	0.00208219	PAX2.p2	AK155207|Itgb7|16421|integrin beta 7	AK155594|Itgb7|16421|integrin beta 7	AK144773|Itgb7|16421|integrin beta 7	BC011184|Itgb7|16421|integrin beta 7	AK078871|Itgb7|16421|integrin beta 7	AK154766|Itgb7|16421|integrin beta 7	NM_013566|Itgb7|16421|integrin beta 7
mm9_v1_chr3_-_97215101_97215101	0.00206916	PAX2.p2	BC108950|Olfr1402|258272|olfactory receptor 1402	BC108951|Olfr1402|258272|olfactory receptor 1402	NM_146275|Olfr1402|258272|olfactory receptor 1402
mm9_v1_chr2_-_130468507_130468540	0.00206078	PAX2.p2	AK161711|Prosapip1|241638|ProSAPiP1 protein	AK148251|Prosapip1|241638|ProSAPiP1 protein	NM_197945|Prosapip1|241638|ProSAPiP1 protein
mm9_v1_chr7_-_31758390_31758487	0.00204245	PAX2.p2	AK167463|Lsr|54135|lipolysis stimulated lipoprotein receptor	NM_001164184|Lsr|54135|lipolysis stimulated lipoprotein receptor	NM_001164185|Lsr|54135|lipolysis stimulated lipoprotein receptor	NM_017405|Lsr|54135|lipolysis stimulated lipoprotein receptor
mm9_v1_chr12_+_89598984_89599091	0.00196646	PAX2.p2	AK011310|Adck1|72113|aarF domain containing kinase 1	AK154839|Adck1|72113|aarF domain containing kinase 1
mm9_v1_chr12_+_110884340_110884400	0.00194549	PAX2.p2	AF498294|Rian|75745|RNA imprinted and accumulated in nucleus	AB063319|Rian|75745|RNA imprinted and accumulated in nucleus	AK017440|Rian|75745|RNA imprinted and accumulated in nucleus
mm9_v1_chr6_+_77192839_77192971	0.00193191	PAX2.p2	BC027803|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr4_-_15940946_15941025	0.00192348	PAX2.p2	AK053737|Osgin2|209212|oxidative stress induced growth inhibitor family member 2	AK169678|Osgin2|209212|oxidative stress induced growth inhibitor family member 2	AK148243|Osgin2|209212|oxidative stress induced growth inhibitor family member 2	AK048731|Osgin2|209212|oxidative stress induced growth inhibitor family member 2	NM_145950|Osgin2|209212|oxidative stress induced growth inhibitor family member 2
mm9_v1_chr9_+_38185467_38185476	0.0019214	PAX2.p2	BC106986|Olfr900|258874|olfactory receptor 900	NM_146874|Olfr900|258874|olfactory receptor 900	NM_207553|Olfr251|404313|olfactory receptor 251
mm9_v1_chr8_+_73223681_73223719	0.00186832	PAX2.p2	AK196038|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr11_-_117830554_117830679	0.00186382	PAX2.p2	NM_007707|Socs3|12702|suppressor of cytokine signaling 3
mm9_v1_chr19_-_4839283_4839342	0.00185245	PAX2.p2	AF173379|Ccs|12460|copper chaperone for superoxide dismutase	BC026938|Ccs|12460|copper chaperone for superoxide dismutase	NM_016892|Ccs|12460|copper chaperone for superoxide dismutase
mm9_v1_chr16_+_44765848_44765938	0.00183933	PAX2.p2	NM_021325|Cd200r1|57781|CD200 receptor 1	AK154325|Cd200r1|57781|CD200 receptor 1	AK154722|Cd200r1|57781|CD200 receptor 1	BC052682|Cd200r1|57781|CD200 receptor 1	AK089173|Cd200r1|57781|CD200 receptor 1	AK089415|Cd200r1|57781|CD200 receptor 1	AK170735|Cd200r1|57781|CD200 receptor 1	AK171590|Cd200r1|57781|CD200 receptor 1	AK171130|Cd200r1|57781|CD200 receptor 1	AK054236|Cd200r1|57781|CD200 receptor 1
mm9_v1_chr2_-_17653057_17653112	0.00183563	PAX2.p2	AK077332|Nebl|74103|nebulette
mm9_v1_chr11_+_77845814_77845821	0.0017881	PAX2.p2	NM_183286|Dhrs13|70451|dehydrogenase/reductase (SDR family) member 13
mm9_v1_chr2_-_105228042_105228114	0.00173881	PAX2.p2	AK213156|Rcn1|19672|reticulocalbin 1
mm9_v1_chr17_-_23701167_23701225	0.00171182	PAX2.p2	NM_001033496|Zfp213|449521|zinc finger protein 213
mm9_v1_chr15_-_8049200_8049210	0.00166813	PAX2.p2	AK014750|Wdr70|545085|WD repeat domain 70	BC061236|Wdr70|545085|WD repeat domain 70	NM_001081402|Wdr70|545085|WD repeat domain 70
mm9_v1_chr9_-_21731772_21731905	0.00159114	PAX2.p2	AB030201|Tmem205|235043|transmembrane protein 205	BC010787|Tmem205|235043|transmembrane protein 205	NM_178577|Tmem205|235043|transmembrane protein 205
mm9_v1_chr11_+_78312784_78312851	0.00155041	PAX2.p2	X63003|Vtn|22370|vitronectin	BC012690|Vtn|22370|vitronectin	AF440693|Vtn|22370|vitronectin	M77123|Vtn|22370|vitronectin
mm9_v1_chr19_+_12284057_12284057	0.00154018	PAX2.p2	BC133710|Olfr1431|258409|olfactory receptor 1431	NM_146414|Olfr1431|258409|olfactory receptor 1431
mm9_v1_chr2_-_110203138_110203154	0.00149615	PAX2.p2	BC027250|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK003790|Fibin|67606|fin bud initiation factor homolog (zebrafish)	NM_026271|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr17_+_36974140_36974211	0.00144014	PAX2.p2	AK148247|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr4_+_15941112_15941180	0.00143641	PAX2.p2	
mm9_v1_chr13_-_104623606_104623708	0.00143192	PAX2.p2	BC005691|Erbb2ip|59079|Erbb2 interacting protein
mm9_v1_chr6_+_3448385_3448452	0.00133255	PAX2.p2	NM_001167750|Ccdc132|73288|coiled-coil domain containing 132	NM_001167751|Ccdc132|73288|coiled-coil domain containing 132	NM_024260|Ccdc132|73288|coiled-coil domain containing 132	AY254697|Ccdc132|73288|coiled-coil domain containing 132	AK075898|Ccdc132|73288|coiled-coil domain containing 132	AK042031|Ccdc132|73288|coiled-coil domain containing 132	AK018415|Ccdc132|73288|coiled-coil domain containing 132	BC043092|Ccdc132|73288|coiled-coil domain containing 132	AK129458|Ccdc132|73288|coiled-coil domain containing 132	BC036294|Ccdc132|73288|coiled-coil domain containing 132
mm9_v1_chr2_+_18598882_18599030	0.0012819	PAX2.p2	BC053708|Bmi1|12151|Bmi1 polycomb ring finger oncogene
mm9_v1_chr11_-_61575474_61575589	0.00126766	PAX2.p2	BC051438|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC106185|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK076811|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK077330|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK038680|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC023178|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164242|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164243|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164244|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_144806|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2
mm9_v1_chr15_+_81575472_81575548	0.00124554	PAX2.p2	AK165492|Zc3h7b|20286|zinc finger CCCH type containing 7B	AK147978|Zc3h7b|20286|zinc finger CCCH type containing 7B	AK147484|Zc3h7b|20286|zinc finger CCCH type containing 7B	BC059923|Zc3h7b|20286|zinc finger CCCH type containing 7B	AK171949|Zc3h7b|20286|zinc finger CCCH type containing 7B
mm9_v1_chr1_+_74309108_74309138	0.00123596	PAX2.p2	AK211266|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr11_-_3831515_3831585	0.00121348	PAX2.p2	AK197212|Tcn2|21452|transcobalamin 2	AF090686|Tcn2|21452|transcobalamin 2
mm9_v1_chr6_+_99642672_99642672	0.00120538	PAX2.p2	NM_008158|Gpr27|14761|G protein-coupled receptor 27
mm9_v1_chr7_+_70589623_70589657	0.00120185	PAX2.p2	AJ430384|Otud7a|170711|OTU domain containing 7A	NM_130880|Otud7a|170711|OTU domain containing 7A
mm9_v1_chr15_+_35301285_35301305	0.00119681	PAX2.p2	AK053274|Vps13b|666173|vacuolar protein sorting 13B (yeast)	NM_177151|Vps13b|666173|vacuolar protein sorting 13B (yeast)	AK049111|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr10_+_86168555_86168616	0.00110382	PAX2.p2	NM_001003910|BC030307|103220|cDNA sequence BC030307	NM_001003939|BC030307|103220|cDNA sequence BC030307	AY651019|BC030307|103220|cDNA sequence BC030307	BC030307|BC030307|103220|cDNA sequence BC030307	AK133195|BC030307|103220|cDNA sequence BC030307
mm9_v1_chr11_+_51076626_51076703	0.00107953	PAX2.p2	NM_007714|Clk4|12750|CDC like kinase 4	BC012675|Clk4|12750|CDC like kinase 4	AK013974|Clk4|12750|CDC like kinase 4	U94846|Clk4|12750|CDC like kinase 4	AF033566|Clk4|12750|CDC like kinase 4
mm9_v1_chr10_+_79608206_79608223	0.00101387	PAX2.p2	
mm9_v1_chr10_-_75384293_75384361	0.000903696	PAX2.p2	BC025163|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	AB041578|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	AJ011739|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	AJ011740|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	AK008558|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	AK075906|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	AK145552|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	AK150169|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	NM_001161853|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	NM_011418|Smarcb1|20587|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
mm9_v1_chr3_+_102800607_102800650	0.000901239	PAX2.p2	
mm9_v1_chr17_+_35383898_35384035	0.000884968	PAX2.p2	AK194985|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK195134|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK217230|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm9_v1_chr16_-_59027730_59027752	0.000862913	PAX2.p2	NM_146321|Olfr186|258318|olfactory receptor 186	BC150713|Olfr186|258318|olfactory receptor 186
mm9_v1_chr3_-_115590869_115590891	0.000827981	PAX2.p2	AK007373|A930005H10Rik|68161|RIKEN cDNA A930005H10 gene
mm9_v1_chr2_+_34628721_34628809	0.000809397	PAX2.p2	AK219322|Hspa5|14828|heat shock protein 5
mm9_v1_chr9_+_43901941_43901990	0.000800295	PAX2.p2	AK047204|Usp2|53376|ubiquitin specific peptidase 2	AK081112|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr3_-_32490071_32490129	0.000775319	PAX2.p2	AK195471|Gnb4|14696|guanine nucleotide binding protein (G protein), beta 4	AK211063|Gnb4|14696|guanine nucleotide binding protein (G protein), beta 4
mm9_v1_chr6_+_70794501_70794578	0.000696497	PAX2.p2	BC054809|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	NM_010121|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	AF076681|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	AK010397|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3	AK046355|Eif2ak3|13666|eukaryotic translation initiation factor 2 alpha kinase 3
mm9_v1_chr1_-_78485459_78485471	0.000689657	PAX2.p2	AF123263|Farsb|23874|phenylalanyl-tRNA synthetase, beta subunit
mm9_v1_chr11_-_89280247_89280261	0.000578105	PAX2.p2	BC140961|4932411E22Rik|214604|RIKEN cDNA 4932411E22 gene	AK029964|4932411E22Rik|214604|RIKEN cDNA 4932411E22 gene	NM_172534|4932411E22Rik|214604|RIKEN cDNA 4932411E22 gene
mm9_v1_chr5_-_122907002_122907003	0.000519972	PAX2.p2	AK134659|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr8_+_74703943_74704132	0.000471333	PAX2.p2	AK003319|Rab8a|17274|RAB8A, member RAS oncogene family
mm9_v1_chr2_-_60590923_60591029	0.000399702	PAX2.p2	AK201259|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr9_+_30750127_30750147	0.000357949	PAX2.p2	AF175282|Adamts8|30806|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8	NM_013906|Adamts8|30806|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8
mm9_v1_chr9_-_50467884_50467918	0.000348982	PAX2.p2	AK032124|Dlat|235339|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)	NM_145614|Dlat|235339|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm9_v1_chr1_+_74442542_74442675	0.000329434	PAX2.p2	AK192838|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr7_+_116084192_116084237	0.00031749	PAX2.p2	
mm9_v1_chr8_+_42011568_42011702	0.000284099	PAX2.p2	AK081847|Pdgfrl|68797|platelet-derived growth factor receptor-like	AK132625|Pdgfrl|68797|platelet-derived growth factor receptor-like	NM_026840|Pdgfrl|68797|platelet-derived growth factor receptor-like	BC058275|Pdgfrl|68797|platelet-derived growth factor receptor-like	AK004179|Pdgfrl|68797|platelet-derived growth factor receptor-like
mm9_v1_chr5_-_31490075_31490203	0.000270704	PAX2.p2	
mm9_v1_chr17_-_26122462_26122576	0.000266204	PAX2.p2	AK185014|Solh|50817|small optic lobes homolog (Drosophila)
mm9_v1_chr1_-_165243777_165243829	0.000260331	PAX2.p2	NM_001025570|Prrx1|18933|paired related homeobox 1	NM_011127|Prrx1|18933|paired related homeobox 1	NM_175686|Prrx1|18933|paired related homeobox 1	U03873|Prrx1|18933|paired related homeobox 1	AK084387|Prrx1|18933|paired related homeobox 1	AK029347|Prrx1|18933|paired related homeobox 1
mm9_v1_chr4_-_141161882_141162024	0.000216964	PAX2.p2	AK170440|Fblim1|74202|filamin binding LIM protein 1	AK154680|Fblim1|74202|filamin binding LIM protein 1	AK163587|Fblim1|74202|filamin binding LIM protein 1	AK170151|Fblim1|74202|filamin binding LIM protein 1	NM_133754|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr17_-_78817348_78817472	0.000166571	PAX2.p2	BC064130|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK033547|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK165595|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC096619|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AY382580|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	NM_199448|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK159545|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK157221|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK150241|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC052366|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)
mm9_v1_chr18_-_55149819_55149833	0.000161972	PAX2.p2	AK051334|Zfp608|269023|zinc finger protein 608	NM_175751|Zfp608|269023|zinc finger protein 608
mm9_v1_chr15_+_78075220_78075493	0.000157588	PAX2.p2	NM_008677|Ncf4|17972|neutrophil cytosolic factor 4	AK150510|Ncf4|17972|neutrophil cytosolic factor 4	AB002665|Ncf4|17972|neutrophil cytosolic factor 4	U59488|Ncf4|17972|neutrophil cytosolic factor 4	BC025517|Ncf4|17972|neutrophil cytosolic factor 4	FJ168470|Ncf4|17972|neutrophil cytosolic factor 4	AK171315|Ncf4|17972|neutrophil cytosolic factor 4
mm9_v1_chr8_-_42219037_42219129	0.000156599	PAX2.p2	AK040710|Mtus1|102103|mitochondrial tumor suppressor 1	AK143781|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005863|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr4_+_115894199_115894212	0.000155773	PAX2.p2	AK135693|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm9_v1_chr7_-_133938863_133938974	0.000138589	PAX2.p2	
mm9_v1_chr15_+_78860623_78860757	0.000118952	PAX2.p2	
mm9_v1_chr11_-_100122302_100122344	0.00011154	PAX2.p2	AB013608|Krt17|16667|keratin 17	NM_010663|Krt17|16667|keratin 17	BC032161|Krt17|16667|keratin 17	BC132454|Krt17|16667|keratin 17	BC132456|Krt17|16667|keratin 17
mm9_v1_chr11_-_100355280_100355392	1.64282e-05	PAX2.p2	AK136812|Acly|104112|ATP citrate lyase	AK043434|Acly|104112|ATP citrate lyase
mm9_v1_chr16_+_49868005_49868080	1.43501e-05	PAX2.p2	BC009094|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr11_+_68939734_68939879	1.04876e-05	PAX2.p2	NM_011786|Aloxe3|23801|arachidonate lipoxygenase 3	Y14695|Aloxe3|23801|arachidonate lipoxygenase 3	BC116258|Aloxe3|23801|arachidonate lipoxygenase 3	BC116259|Aloxe3|23801|arachidonate lipoxygenase 3
