mm9_v1_chr7_-_111001598_111001720	3.02223	RUNX1..3.p2	V00857|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	M26897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	BC057014|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK011619|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012501|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	NM_008221|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain
mm9_v1_chr9_-_37240759_37240759	2.6689	RUNX1..3.p2	NM_001164767|Robo3|19649|roundabout homolog 3 (Drosophila)
mm9_v1_chrM_+_1550_2087	2.02284	RUNX1..3.p2	
mm9_v1_chrM_+_11812_11845	1.70966	RUNX1..3.p2	
mm9_v1_chr5_-_136386463_136386544	1.38127	RUNX1..3.p2	AK192597|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK208362|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr3_+_127336055_127336062	1.36708	RUNX1..3.p2	AK143190|Neurog2|11924|neurogenin 2	BC055743|Neurog2|11924|neurogenin 2	NM_009718|Neurog2|11924|neurogenin 2
mm9_v1_chr18_+_37999857_37999932	1.26635	RUNX1..3.p2	
mm9_v1_chr6_-_127075853_127076093	1.25684	RUNX1..3.p2	AK193960|Ccnd2|12444|cyclin D2	AK011429|Ccnd2|12444|cyclin D2	AK009602|Ccnd2|12444|cyclin D2
mm9_v1_chr4_-_6917628_6917956	1.23808	RUNX1..3.p2	AK161718|Tox|252838|thymocyte selection-associated high mobility group box	AK161578|Tox|252838|thymocyte selection-associated high mobility group box	AF472514|Tox|252838|thymocyte selection-associated high mobility group box	AK029694|Tox|252838|thymocyte selection-associated high mobility group box	AK133397|Tox|252838|thymocyte selection-associated high mobility group box	BC080732|Tox|252838|thymocyte selection-associated high mobility group box	AK038671|Tox|252838|thymocyte selection-associated high mobility group box	NM_145711|Tox|252838|thymocyte selection-associated high mobility group box
mm9_v1_chr8_+_73223681_73223719	1.21044	RUNX1..3.p2	AK196038|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chrM_+_11027_11268	1.02323	RUNX1..3.p2	
mm9_v1_chr4_+_149020903_149020988	0.971849	RUNX1..3.p2	BC014747|Clstn1|65945|calsyntenin 1
mm9_v1_chr8_-_47292973_47292977	0.955206	RUNX1..3.p2	AK186988|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
mm9_v1_chr9_+_102620058_102620083	0.929493	RUNX1..3.p2	AK164279|Amotl2|56332|angiomotin-like 2
mm9_v1_chr17_+_35383898_35384035	0.91009	RUNX1..3.p2	AK194985|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK195134|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK217230|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm9_v1_chr5_-_141096711_141096848	0.889074	RUNX1..3.p2	AK019322|Ttyh3|78339|tweety homolog 3 (Drosophila)
mm9_v1_chr7_-_147234897_147234986	0.88194	RUNX1..3.p2	AB221640|Msx3|17703|homeobox, msh-like 3	BC051983|Msx3|17703|homeobox, msh-like 3	BC137577|Msx3|17703|homeobox, msh-like 3	BC137578|Msx3|17703|homeobox, msh-like 3	U62523|Msx3|17703|homeobox, msh-like 3	AK012208|Msx3|17703|homeobox, msh-like 3	AK012556|Msx3|17703|homeobox, msh-like 3	NM_010836|Msx3|17703|homeobox, msh-like 3
mm9_v1_chr11_-_59025422_59025528	0.872059	RUNX1..3.p2	AK211704|Arf1|11840|ADP-ribosylation factor 1	AK195749|Arf1|11840|ADP-ribosylation factor 1
mm9_v1_chr10_+_24315247_24315401	0.859149	RUNX1..3.p2	NM_010217|Ctgf|14219|connective tissue growth factor	BC006783|Ctgf|14219|connective tissue growth factor	M80263|Ctgf|14219|connective tissue growth factor	M70642|Ctgf|14219|connective tissue growth factor
mm9_v1_chr8_-_87368790_87368860	0.853618	RUNX1..3.p2	
mm9_v1_chr19_-_20465158_20465166	0.842582	RUNX1..3.p2	AK167612|Anxa1|16952|annexin A1	AK171422|Anxa1|16952|annexin A1	NM_010730|Anxa1|16952|annexin A1	AK002681|Anxa1|16952|annexin A1	AK037064|Anxa1|16952|annexin A1	AK140838|Anxa1|16952|annexin A1	AK150564|Anxa1|16952|annexin A1	AK150718|Anxa1|16952|annexin A1	AK153156|Anxa1|16952|annexin A1	AK153490|Anxa1|16952|annexin A1	AK154568|Anxa1|16952|annexin A1	AK170612|Anxa1|16952|annexin A1	AK049455|Anxa1|16952|annexin A1
mm9_v1_chr7_-_29678773_29678890	0.813141	RUNX1..3.p2	AK195007|Actn4|60595|actinin alpha 4
mm9_v1_chr13_-_100199745_100199766	0.801331	RUNX1..3.p2	AK148870|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr9_+_102620096_102620187	0.799952	RUNX1..3.p2	AK141348|Amotl2|56332|angiomotin-like 2	AK164819|Amotl2|56332|angiomotin-like 2	NM_019764|Amotl2|56332|angiomotin-like 2	AK077535|Amotl2|56332|angiomotin-like 2	AK169419|Amotl2|56332|angiomotin-like 2	BC035201|Amotl2|56332|angiomotin-like 2	BC027824|Amotl2|56332|angiomotin-like 2
mm9_v1_chr5_-_92483744_92484066	0.79811	RUNX1..3.p2	AK169571|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK220349|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr2_+_164773719_164773750	0.785804	RUNX1..3.p2	D12712|Mmp9|17395|matrix metallopeptidase 9	AK142787|Mmp9|17395|matrix metallopeptidase 9	AK159292|Mmp9|17395|matrix metallopeptidase 9	AK161176|Mmp9|17395|matrix metallopeptidase 9	Z27231|Mmp9|17395|matrix metallopeptidase 9	AK004651|Mmp9|17395|matrix metallopeptidase 9	BC046991|Mmp9|17395|matrix metallopeptidase 9	NM_013599|Mmp9|17395|matrix metallopeptidase 9
mm9_v1_chr2_+_174171943_174171964	0.781917	RUNX1..3.p2	
mm9_v1_chr18_+_78012766_78012832	0.778609	RUNX1..3.p2	AK218124|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr19_+_5493612_5493771	0.765097	RUNX1..3.p2	AK195534|Cfl1|12631|cofilin 1, non-muscle	AK198064|Cfl1|12631|cofilin 1, non-muscle	AK200194|Cfl1|12631|cofilin 1, non-muscle	AK208902|Cfl1|12631|cofilin 1, non-muscle	AK215762|Cfl1|12631|cofilin 1, non-muscle
mm9_v1_chr11_-_116711807_116712035	0.744789	RUNX1..3.p2	AK211203|Srsf2|20382|serine/arginine-rich splicing factor 2	AK207032|Srsf2|20382|serine/arginine-rich splicing factor 2	AK212169|Srsf2|20382|serine/arginine-rich splicing factor 2	AK220014|Srsf2|20382|serine/arginine-rich splicing factor 2	AF250134|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr5_+_120881778_120882006	0.738658	RUNX1..3.p2	U61155|Lhx5|16873|LIM homeobox protein 5	AK140208|Lhx5|16873|LIM homeobox protein 5	NM_008499|Lhx5|16873|LIM homeobox protein 5	AK048778|Lhx5|16873|LIM homeobox protein 5	AK033927|Lhx5|16873|LIM homeobox protein 5	BC057585|Lhx5|16873|LIM homeobox protein 5
mm9_v1_chr9_+_72859850_72859978	0.716788	RUNX1..3.p2	BC006717|Ccpg1|72278|cell cycle progression 1
mm9_v1_chr15_+_98620287_98620435	0.71622	RUNX1..3.p2	BC005449|Wnt1|22408|wingless-related MMTV integration site 1	NM_021279|Wnt1|22408|wingless-related MMTV integration site 1	AK141669|Wnt1|22408|wingless-related MMTV integration site 1	M11943|Wnt1|22408|wingless-related MMTV integration site 1
mm9_v1_chr11_+_97311458_97311517	0.713112	RUNX1..3.p2	NM_021493|Arhgap23|58996|Rho GTPase activating protein 23
mm9_v1_chrM_+_11741_11742	0.698197	RUNX1..3.p2	AK140457|ND5|17721|NADH dehydrogenase subunit 5
mm9_v1_chr7_-_106630812_106630831	0.695381	RUNX1..3.p2	U89414|Rps3|27050|ribosomal protein S3
mm9_v1_chrM_+_12178_12184	0.676895	RUNX1..3.p2	
mm9_v1_chr8_+_56122680_56122847	0.663989	RUNX1..3.p2	BC023461|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr8_-_47292863_47292905	0.648371	RUNX1..3.p2	
mm9_v1_chr13_+_95645581_95645581	0.638906	RUNX1..3.p2	NM_011021|Otp|18420|orthopedia homolog (Drosophila)	Y10413|Otp|18420|orthopedia homolog (Drosophila)
mm9_v1_chr5_-_99681835_99681949	0.627667	RUNX1..3.p2	AK028756|Rasgef1b|320292|RasGEF domain family, member 1B	BC052726|Rasgef1b|320292|RasGEF domain family, member 1B	AK090085|Rasgef1b|320292|RasGEF domain family, member 1B	AK149812|Rasgef1b|320292|RasGEF domain family, member 1B	AY129963|Rasgef1b|320292|RasGEF domain family, member 1B	BC050858|Rasgef1b|320292|RasGEF domain family, member 1B	NM_145839|Rasgef1b|320292|RasGEF domain family, member 1B	NM_181318|Rasgef1b|320292|RasGEF domain family, member 1B
mm9_v1_chr11_+_68505416_68505481	0.626909	RUNX1..3.p2	NM_175260|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr14_-_71041964_71042074	0.624212	RUNX1..3.p2	AK082858|Fgf17|14171|fibroblast growth factor 17	BC119033|Fgf17|14171|fibroblast growth factor 17	BC144776|Fgf17|14171|fibroblast growth factor 17	AK077555|Fgf17|14171|fibroblast growth factor 17	NM_008004|Fgf17|14171|fibroblast growth factor 17
mm9_v1_chr5_+_32780438_32780530	0.613717	RUNX1..3.p2	AK198041|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK202060|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK217081|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK214320|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr8_-_49075838_49075874	0.606775	RUNX1..3.p2	AK147944|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chr4_-_129118034_129118085	0.602368	RUNX1..3.p2	BC023839|Zbtb8b|215627|zinc finger and BTB domain containing 8b	AK140914|Zbtb8b|215627|zinc finger and BTB domain containing 8b	AK163930|Zbtb8b|215627|zinc finger and BTB domain containing 8b	NM_153541|Zbtb8b|215627|zinc finger and BTB domain containing 8b
mm9_v1_chr10_+_69903560_69903635	0.601964	RUNX1..3.p2	AK021133|Fam13c|71721|family with sequence similarity 13, member C	AK220421|Fam13c|71721|family with sequence similarity 13, member C	AK032053|Fam13c|71721|family with sequence similarity 13, member C
mm9_v1_chr7_-_150646883_150646954	0.595499	RUNX1..3.p2	U22399|Cdkn1c|12577|cyclin-dependent kinase inhibitor 1C (P57)	BC005412|Cdkn1c|12577|cyclin-dependent kinase inhibitor 1C (P57)	AK077844|Cdkn1c|12577|cyclin-dependent kinase inhibitor 1C (P57)	AK132278|Cdkn1c|12577|cyclin-dependent kinase inhibitor 1C (P57)	NM_001161624|Cdkn1c|12577|cyclin-dependent kinase inhibitor 1C (P57)	NM_009876|Cdkn1c|12577|cyclin-dependent kinase inhibitor 1C (P57)
mm9_v1_chrX_+_133371611_133371673	0.595371	RUNX1..3.p2	AK199492|Plp1|18823|proteolipid protein (myelin) 1
mm9_v1_chr10_+_17516024_17516131	0.594429	RUNX1..3.p2	AK084639|Txlnb|378431|taxilin beta	NM_138628|Txlnb|378431|taxilin beta	AK084579|Txlnb|378431|taxilin beta	AK052324|Txlnb|378431|taxilin beta	AF422244|Txlnb|378431|taxilin beta	AF422245|Txlnb|378431|taxilin beta	AK137442|Txlnb|378431|taxilin beta	BC141023|Txlnb|378431|taxilin beta	AK085904|Txlnb|378431|taxilin beta
mm9_v1_chr13_+_74075268_74075296	0.594356	RUNX1..3.p2	AK154645|Brd9|105246|bromodomain containing 9	AK142152|Brd9|105246|bromodomain containing 9	BC031484|Brd9|105246|bromodomain containing 9	NM_001024508|Brd9|105246|bromodomain containing 9
mm9_v1_chr7_+_112706171_112706777	0.593189	RUNX1..3.p2	AK205297|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK206661|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK214733|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK212303|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK182658|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK205584|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK190375|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK195882|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK180590|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal	AK205699|Smpd1|20597|sphingomyelin phosphodiesterase 1, acid lysosomal
mm9_v1_chr5_-_108998727_108998913	0.58379	RUNX1..3.p2	AK204470|Gak|231580|cyclin G associated kinase	AK205859|Gak|231580|cyclin G associated kinase
mm9_v1_chr2_+_73109981_73109991	0.579282	RUNX1..3.p2	AY591908|Sp9|381373|trans-acting transcription factor 9	NM_001005343|Sp9|381373|trans-acting transcription factor 9	AK135123|Sp9|381373|trans-acting transcription factor 9
mm9_v1_chr19_+_6371205_6371279	0.571759	RUNX1..3.p2	
mm9_v1_chr11_-_68505223_68505271	0.568957	RUNX1..3.p2	AK020381|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr10_+_80642896_80643136	0.562088	RUNX1..3.p2	AK210872|Eef2|13629|eukaryotic translation elongation factor 2	AK209228|Eef2|13629|eukaryotic translation elongation factor 2	AK202124|Eef2|13629|eukaryotic translation elongation factor 2	AK187806|Eef2|13629|eukaryotic translation elongation factor 2	AK193965|Eef2|13629|eukaryotic translation elongation factor 2	AK198543|Eef2|13629|eukaryotic translation elongation factor 2	AK199188|Eef2|13629|eukaryotic translation elongation factor 2	AK199799|Eef2|13629|eukaryotic translation elongation factor 2	AK203090|Eef2|13629|eukaryotic translation elongation factor 2	AK205853|Eef2|13629|eukaryotic translation elongation factor 2	AK207466|Eef2|13629|eukaryotic translation elongation factor 2	AK216165|Eef2|13629|eukaryotic translation elongation factor 2	AK216384|Eef2|13629|eukaryotic translation elongation factor 2	AK205723|Eef2|13629|eukaryotic translation elongation factor 2	AK164406|Eef2|13629|eukaryotic translation elongation factor 2	AK189872|Eef2|13629|eukaryotic translation elongation factor 2	AK195340|Eef2|13629|eukaryotic translation elongation factor 2	AK206829|Eef2|13629|eukaryotic translation elongation factor 2	AK207351|Eef2|13629|eukaryotic translation elongation factor 2	AK211185|Eef2|13629|eukaryotic translation elongation factor 2	AK217298|Eef2|13629|eukaryotic translation elongation factor 2	AK217627|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr19_+_10271150_10271263	0.552539	RUNX1..3.p2	AK191356|Fads1|76267|fatty acid desaturase 1	AK199659|Fads1|76267|fatty acid desaturase 1
mm9_v1_chr10_+_126500607_126500768	0.546948	RUNX1..3.p2	BC046336|Cdk4|12567|cyclin-dependent kinase 4	NM_009870|Cdk4|12567|cyclin-dependent kinase 4	AK153465|Cdk4|12567|cyclin-dependent kinase 4	BC052694|Cdk4|12567|cyclin-dependent kinase 4	BC031599|Cdk4|12567|cyclin-dependent kinase 4	AK011871|Cdk4|12567|cyclin-dependent kinase 4	AK003804|Cdk4|12567|cyclin-dependent kinase 4	AK006918|Cdk4|12567|cyclin-dependent kinase 4	AK012064|Cdk4|12567|cyclin-dependent kinase 4	AK146107|Cdk4|12567|cyclin-dependent kinase 4	AK019380|Cdk4|12567|cyclin-dependent kinase 4	AK078440|Cdk4|12567|cyclin-dependent kinase 4	AK013400|Cdk4|12567|cyclin-dependent kinase 4	AK185090|Cdk4|12567|cyclin-dependent kinase 4
mm9_v1_chr11_+_98799013_98799173	0.543702	RUNX1..3.p2	S56656|Rara|19401|retinoic acid receptor, alpha	BC040383|Rara|19401|retinoic acid receptor, alpha	NM_001177302|Rara|19401|retinoic acid receptor, alpha	AK154623|Rara|19401|retinoic acid receptor, alpha
mm9_v1_chrX_-_147241307_147241451	0.540983	RUNX1..3.p2	AK179193|Maged2|80884|melanoma antigen, family D, 2
mm9_v1_chr19_-_5799376_5799434	0.539565	RUNX1..3.p2	AK020483|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr8_+_73058795_73058894	0.531814	RUNX1..3.p2	AK189244|Fkbp8|14232|FK506 binding protein 8	AK188492|Fkbp8|14232|FK506 binding protein 8	AK190969|Fkbp8|14232|FK506 binding protein 8	AK205574|Fkbp8|14232|FK506 binding protein 8	AK212129|Fkbp8|14232|FK506 binding protein 8	AK207414|Fkbp8|14232|FK506 binding protein 8	AK192821|Fkbp8|14232|FK506 binding protein 8	AK208969|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr15_-_75905997_75906049	0.514908	RUNX1..3.p2	BC119437|Puf60|67959|poly-U binding splicing factor 60	BC148274|Puf60|67959|poly-U binding splicing factor 60
mm9_v1_chr10_+_126437764_126437859	0.503198	RUNX1..3.p2	NM_009635|Avil|11567|advillin	AF059486|Avil|11567|advillin	AK154851|Avil|11567|advillin	AK155900|Avil|11567|advillin	AK170878|Avil|11567|advillin	AK171324|Avil|11567|advillin	AK171319|Avil|11567|advillin	AF041448|Avil|11567|advillin	BC119222|Avil|11567|advillin	BC120545|Avil|11567|advillin
mm9_v1_chr16_+_16896561_16896699	0.503026	RUNX1..3.p2	AK016942|Ppm1f|68606|protein phosphatase 1F (PP2C domain containing)	NM_176833|Ppm1f|68606|protein phosphatase 1F (PP2C domain containing)	AK154192|Ppm1f|68606|protein phosphatase 1F (PP2C domain containing)	AK164964|Ppm1f|68606|protein phosphatase 1F (PP2C domain containing)
mm9_v1_chr1_-_176851949_176851953	0.496396	RUNX1..3.p2	AB011030|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	NM_011825|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	AK142008|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr2_+_73110010_73110058	0.486701	RUNX1..3.p2	BC139398|Sp9|381373|trans-acting transcription factor 9	BC139407|Sp9|381373|trans-acting transcription factor 9
mm9_v1_chr11_-_51419012_51419040	0.484819	RUNX1..3.p2	AK207379|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr19_-_5093049_5093189	0.483336	RUNX1..3.p2	AK211408|Cnih2|12794|cornichon homolog 2 (Drosophila)
mm9_v1_chr15_-_98781060_98781163	0.482514	RUNX1..3.p2	M28729|Tuba1a|22142|tubulin, alpha 1A	AK201449|Tuba1a|22142|tubulin, alpha 1A
mm9_v1_chr7_-_149562239_149562649	0.477988	RUNX1..3.p2	AK180828|Ctsd|13033|cathepsin D	AK183526|Ctsd|13033|cathepsin D
mm9_v1_chr1_-_20608010_20608144	0.477415	RUNX1..3.p2	AY438374|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK143992|Pkhd1|241035|polycystic kidney and hepatic disease 1	AY130764|Pkhd1|241035|polycystic kidney and hepatic disease 1	NM_153179|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK052698|Pkhd1|241035|polycystic kidney and hepatic disease 1
mm9_v1_chr9_+_123371135_123371218	0.476631	RUNX1..3.p2	AY248755|Lars2|102436|leucyl-tRNA synthetase, mitochondrial
mm9_v1_chr10_+_69903415_69903494	0.475574	RUNX1..3.p2	AK081939|Fam13c|71721|family with sequence similarity 13, member C	NM_001143777|Fam13c|71721|family with sequence similarity 13, member C	AK036299|Fam13c|71721|family with sequence similarity 13, member C	AK039513|Fam13c|71721|family with sequence similarity 13, member C	AK044049|Fam13c|71721|family with sequence similarity 13, member C
mm9_v1_chr7_-_106628404_106628486	0.472283	RUNX1..3.p2	AK197233|Rps3|27050|ribosomal protein S3	AK197426|Rps3|27050|ribosomal protein S3	AK201330|Rps3|27050|ribosomal protein S3	AK211385|Rps3|27050|ribosomal protein S3
mm9_v1_chr14_+_66915852_66915861	0.469022	RUNX1..3.p2	NM_029979|Trim35|66854|tripartite motif-containing 35
mm9_v1_chr16_-_85043886_85043990	0.468574	RUNX1..3.p2	X15210|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr10_+_43298969_43299042	0.466125	RUNX1..3.p2	AK014279|Cd24a|12484|CD24a antigen	NM_009846|Cd24a|12484|CD24a antigen	AK133869|Cd24a|12484|CD24a antigen	AK168111|Cd24a|12484|CD24a antigen	AK169613|Cd24a|12484|CD24a antigen	BC026702|Cd24a|12484|CD24a antigen	M58661|Cd24a|12484|CD24a antigen	BC075622|Cd24a|12484|CD24a antigen	X53825|Cd24a|12484|CD24a antigen
mm9_v1_chr10_-_86164623_86164759	0.463246	RUNX1..3.p2	AK031918|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK160827|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215377|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215142|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210698|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210697|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK205935|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK216702|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK218021|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK186620|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chr10_-_80204945_80204960	0.458365	RUNX1..3.p2	BC037477|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	BC048786|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	BC022171|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	AB004305|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	NM_007460|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr8_-_72411261_72411294	0.456498	RUNX1..3.p2	BC006187|Cilp2|68709|cartilage intermediate layer protein 2	NM_026818|Cilp2|68709|cartilage intermediate layer protein 2
mm9_v1_chr1_-_71699671_71699799	0.454853	RUNX1..3.p2	BC138421|Fn1|14268|fibronectin 1	BC145271|Fn1|14268|fibronectin 1	BC051082|Fn1|14268|fibronectin 1	BC099373|Fn1|14268|fibronectin 1	AK170654|Fn1|14268|fibronectin 1	NM_010233|Fn1|14268|fibronectin 1	AK054456|Fn1|14268|fibronectin 1	AK090130|Fn1|14268|fibronectin 1	AK090135|Fn1|14268|fibronectin 1	AK147315|Fn1|14268|fibronectin 1	AK147639|Fn1|14268|fibronectin 1	AK147654|Fn1|14268|fibronectin 1	AK147663|Fn1|14268|fibronectin 1	AK147683|Fn1|14268|fibronectin 1	AK147701|Fn1|14268|fibronectin 1	AK171339|Fn1|14268|fibronectin 1	AK170755|Fn1|14268|fibronectin 1
mm9_v1_chr5_-_114292851_114293254	0.453951	RUNX1..3.p2	AK201602|Coro1c|23790|coronin, actin binding protein 1C
mm9_v1_chr4_-_118951578_118951709	0.453654	RUNX1..3.p2	AK213628|Ybx1|22608|Y box protein 1	AK181881|Ybx1|22608|Y box protein 1	AK197905|Ybx1|22608|Y box protein 1
mm9_v1_chr9_+_44307218_44307218	0.446984	RUNX1..3.p2	AY296058|Bcl9l|80288|B-cell CLL/lymphoma 9-like	NM_030256|Bcl9l|80288|B-cell CLL/lymphoma 9-like
mm9_v1_chr3_-_58329346_58329433	0.446877	RUNX1..3.p2	AK178735|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK179107|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK185536|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK190535|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK194381|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK195463|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK209611|Serp1|28146|stress-associated endoplasmic reticulum protein 1
mm9_v1_chr4_-_118954780_118955048	0.444811	RUNX1..3.p2	AK213887|Ybx1|22608|Y box protein 1	AK208509|Ybx1|22608|Y box protein 1	AK212502|Ybx1|22608|Y box protein 1
mm9_v1_chr1_-_77511653_77511664	0.442176	RUNX1..3.p2	AK028509|Epha4|13838|Eph receptor A4	AK147698|Epha4|13838|Eph receptor A4	AK132203|Epha4|13838|Eph receptor A4	NM_007936|Epha4|13838|Eph receptor A4	S57168|Epha4|13838|Eph receptor A4	X65138|Epha4|13838|Eph receptor A4
mm9_v1_chr11_+_75345164_75345232	0.439926	RUNX1..3.p2	AB120363|Slc43a2|215113|solute carrier family 43, member 2	BC042513|Slc43a2|215113|solute carrier family 43, member 2	NM_173388|Slc43a2|215113|solute carrier family 43, member 2
mm9_v1_chr1_-_140071818_140071883	0.43771	RUNX1..3.p2	BC131655|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK088215|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	BC028512|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M14342|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK154893|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK171802|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK054056|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_001111316|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_011210|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr7_+_129776837_129777102	0.435351	RUNX1..3.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr4_+_118808330_118808432	0.433277	RUNX1..3.p2	S77924|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1
mm9_v1_chr11_-_76391228_76391228	0.430569	RUNX1..3.p2	NM_198894|Abr|109934|active BCR-related gene
mm9_v1_chr11_-_115885714_115885820	0.428342	RUNX1..3.p2	BC092300|H3f3b|15081|H3 histone, family 3B	X13605|H3f3b|15081|H3 histone, family 3B	BC021768|H3f3b|15081|H3 histone, family 3B	BC092043|H3f3b|15081|H3 histone, family 3B	BC002052|H3f3b|15081|H3 histone, family 3B	AK169620|H3f3b|15081|H3 histone, family 3B	BC037730|H3f3b|15081|H3 histone, family 3B	AK167828|H3f3b|15081|H3 histone, family 3B	AK153239|H3f3b|15081|H3 histone, family 3B	AK159615|H3f3b|15081|H3 histone, family 3B	AK166605|H3f3b|15081|H3 histone, family 3B	AK168931|H3f3b|15081|H3 histone, family 3B	AK169042|H3f3b|15081|H3 histone, family 3B	AK044933|H3f3b|15081|H3 histone, family 3B	AK151451|H3f3b|15081|H3 histone, family 3B	AK153189|H3f3b|15081|H3 histone, family 3B	AK151274|H3f3b|15081|H3 histone, family 3B	AK151336|H3f3b|15081|H3 histone, family 3B	AK152026|H3f3b|15081|H3 histone, family 3B	AK153294|H3f3b|15081|H3 histone, family 3B	AK153371|H3f3b|15081|H3 histone, family 3B	AK159338|H3f3b|15081|H3 histone, family 3B	AK169226|H3f3b|15081|H3 histone, family 3B	AK146070|H3f3b|15081|H3 histone, family 3B	AK151658|H3f3b|15081|H3 histone, family 3B	AK151661|H3f3b|15081|H3 histone, family 3B	AK151869|H3f3b|15081|H3 histone, family 3B	AK152453|H3f3b|15081|H3 histone, family 3B	AK152455|H3f3b|15081|H3 histone, family 3B	AK152911|H3f3b|15081|H3 histone, family 3B	AK161675|H3f3b|15081|H3 histone, family 3B	AK162426|H3f3b|15081|H3 histone, family 3B	AK168698|H3f3b|15081|H3 histone, family 3B	AK169039|H3f3b|15081|H3 histone, family 3B	AK163244|H3f3b|15081|H3 histone, family 3B	AK002928|H3f3b|15081|H3 histone, family 3B	AK011431|H3f3b|15081|H3 histone, family 3B	AK159807|H3f3b|15081|H3 histone, family 3B	AK159850|H3f3b|15081|H3 histone, family 3B	AK135839|H3f3b|15081|H3 histone, family 3B	AK151222|H3f3b|15081|H3 histone, family 3B	AK152623|H3f3b|15081|H3 histone, family 3B	AK153530|H3f3b|15081|H3 histone, family 3B	NM_008211|H3f3b|15081|H3 histone, family 3B
mm9_v1_chr11_+_98912766_98913266	0.428174	RUNX1..3.p2	AK197851|Igfbp4|16010|insulin-like growth factor binding protein 4	AK198090|Igfbp4|16010|insulin-like growth factor binding protein 4	AK200553|Igfbp4|16010|insulin-like growth factor binding protein 4	AK200478|Igfbp4|16010|insulin-like growth factor binding protein 4	AK003243|Igfbp4|16010|insulin-like growth factor binding protein 4	S80566|Igfbp4|16010|insulin-like growth factor binding protein 4	AK192700|Igfbp4|16010|insulin-like growth factor binding protein 4	AK188474|Igfbp4|16010|insulin-like growth factor binding protein 4
mm9_v1_chr15_+_102313591_102313671	0.427317	RUNX1..3.p2	AK218290|Pcbp2|18521|poly(rC) binding protein 2	AK186166|Pcbp2|18521|poly(rC) binding protein 2
mm9_v1_chr8_+_28370796_28370880	0.426529	RUNX1..3.p2	NM_007918|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	AK167836|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	U28656|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	BC002045|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	AK170031|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	AK169979|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1	AK013033|Eif4ebp1|13685|eukaryotic translation initiation factor 4E binding protein 1
mm9_v1_chr15_+_96199877_96199934	0.424838	RUNX1..3.p2	AK014481|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chrX_-_7667574_7667627	0.421953	RUNX1..3.p2	U42471|Was|22376|Wiskott-Aldrich syndrome homolog (human)	U29673|Was|22376|Wiskott-Aldrich syndrome homolog (human)	U54788|Was|22376|Wiskott-Aldrich syndrome homolog (human)	NM_009515|Was|22376|Wiskott-Aldrich syndrome homolog (human)
mm9_v1_chr9_+_104472090_104472120	0.421385	RUNX1..3.p2	AK043692|Cpne4|74020|copine IV	AK014396|Cpne4|74020|copine IV	BC043087|Cpne4|74020|copine IV	BC063081|Cpne4|74020|copine IV	NM_028719|Cpne4|74020|copine IV
mm9_v1_chr11_-_74710462_74710503	0.420716	RUNX1..3.p2	AK122273|Sgsm2|97761|small G protein signaling modulator 2
mm9_v1_chr11_-_94254221_94254308	0.420079	RUNX1..3.p2	BC048825|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AK155664|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AY841885|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	BC150788|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AF534127|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AF534128|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AF534129|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AY795569|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AK149551|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	NM_029600|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AK156615|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	AK172420|Abcc3|76408|ATP-binding cassette, sub-family C (CFTR/MRP), member 3
mm9_v1_chr19_-_5468482_5468500	0.418841	RUNX1..3.p2	AF014941|Ctsw|13041|cathepsin W	BC019136|Ctsw|13041|cathepsin W	AK088375|Ctsw|13041|cathepsin W	NM_009985|Ctsw|13041|cathepsin W	AK163626|Ctsw|13041|cathepsin W
mm9_v1_chr4_-_6917964_6917984	0.416166	RUNX1..3.p2	AK169546|Tox|252838|thymocyte selection-associated high mobility group box
mm9_v1_chr2_-_155648591_155648734	0.415353	RUNX1..3.p2	AK198737|Eif6|16418|eukaryotic translation initiation factor 6
mm9_v1_chr1_-_93309713_93309830	0.411347	RUNX1..3.p2	AF247040|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK146192|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AB035178|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AF260236|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	BC012897|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK013443|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK005022|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK155340|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK012582|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK076135|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	NM_019479|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK007480|Hes6|55927|hairy and enhancer of split 6 (Drosophila)
mm9_v1_chr11_+_20124648_20124793	0.407522	RUNX1..3.p2	AK207850|Rab1|19324|RAB1, member RAS oncogene family	AK215283|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr1_-_170085798_170085873	0.406734	RUNX1..3.p2	AK080184|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK032161|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK043495|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK085198|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr5_-_136386767_136386839	0.406421	RUNX1..3.p2	AK192492|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr18_+_62708564_62708648	0.405887	RUNX1..3.p2	AK039062|Spink10|328971|serine peptidase inhibitor, Kazal type 10	DQ437330|Spink10|328971|serine peptidase inhibitor, Kazal type 10	NM_177829|Spink10|328971|serine peptidase inhibitor, Kazal type 10	AK162840|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125360|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125362|Spink10|328971|serine peptidase inhibitor, Kazal type 10
mm9_v1_chr4_+_47366162_47366183	0.404044	RUNX1..3.p2	BC063260|Tgfbr1|21812|transforming growth factor, beta receptor I	NM_009370|Tgfbr1|21812|transforming growth factor, beta receptor I	D25540|Tgfbr1|21812|transforming growth factor, beta receptor I	CT010393|Tgfbr1|21812|transforming growth factor, beta receptor I	D28526|Tgfbr1|21812|transforming growth factor, beta receptor I
mm9_v1_chr15_-_36538514_36538548	0.402296	RUNX1..3.p2	X65553|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC003928|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr4_+_135700717_135701086	0.402146	RUNX1..3.p2	AK014306|Id3|15903|inhibitor of DNA binding 3	AK201456|Id3|15903|inhibitor of DNA binding 3	AK192106|Id3|15903|inhibitor of DNA binding 3	AK192107|Id3|15903|inhibitor of DNA binding 3	AK192467|Id3|15903|inhibitor of DNA binding 3	AK199050|Id3|15903|inhibitor of DNA binding 3	AK200444|Id3|15903|inhibitor of DNA binding 3	AK202308|Id3|15903|inhibitor of DNA binding 3
mm9_v1_chr15_+_99239082_99239188	0.40207	RUNX1..3.p2	AK039762|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK003483|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr5_-_143666064_143666381	0.401041	RUNX1..3.p2	AK218630|Actb|11461|actin, beta	BC040513|Actb|11461|actin, beta	AB028847|Actb|11461|actin, beta	AK212447|Actb|11461|actin, beta	AY618569|Actb|11461|actin, beta	U89400|Actb|11461|actin, beta	AK187650|Actb|11461|actin, beta	AK201181|Actb|11461|actin, beta	AK204356|Actb|11461|actin, beta	AK208556|Actb|11461|actin, beta
mm9_v1_chr7_-_20283542_20283606	0.397899	RUNX1..3.p2	CT010212|Apoe|11816|apolipoprotein E	CT010356|Apoe|11816|apolipoprotein E	M12414|Apoe|11816|apolipoprotein E
mm9_v1_chr10_+_69903653_69903701	0.394909	RUNX1..3.p2	AK041147|Fam13c|71721|family with sequence similarity 13, member C	NM_001143776|Fam13c|71721|family with sequence similarity 13, member C	NM_024244|Fam13c|71721|family with sequence similarity 13, member C	AK082202|Fam13c|71721|family with sequence similarity 13, member C	AK004797|Fam13c|71721|family with sequence similarity 13, member C	BC129839|Fam13c|71721|family with sequence similarity 13, member C	BC129840|Fam13c|71721|family with sequence similarity 13, member C
mm9_v1_chr16_-_17132372_17132480	0.392672	RUNX1..3.p2	AB043006|Sdf2l1|64136|stromal cell-derived factor 2-like 1	BC023290|Sdf2l1|64136|stromal cell-derived factor 2-like 1	BC053425|Sdf2l1|64136|stromal cell-derived factor 2-like 1	BC053438|Sdf2l1|64136|stromal cell-derived factor 2-like 1	NM_022324|Sdf2l1|64136|stromal cell-derived factor 2-like 1
mm9_v1_chr9_-_108474818_108474985	0.391679	RUNX1..3.p2	AK184880|Dalrd3|67789|DALR anticodon binding domain containing 3
mm9_v1_chr12_+_50484907_50484951	0.385604	RUNX1..3.p2	BC064449|Foxg1|15228|forkhead box G1
mm9_v1_chr19_+_9026020_9026327	0.38483	RUNX1..3.p2	AK199642|Mta2|23942|metastasis-associated gene family, member 2	AK219174|Mta2|23942|metastasis-associated gene family, member 2	AK195366|Mta2|23942|metastasis-associated gene family, member 2	AK209683|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr9_-_78326946_78326968	0.384812	RUNX1..3.p2	BC099609|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr11_+_116295502_116295595	0.384283	RUNX1..3.p2	AK050732|Fam100b|319370|family with sequence similarity 100, member B	BC119080|Fam100b|319370|family with sequence similarity 100, member B	BC116983|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr8_+_112229383_112229581	0.381373	RUNX1..3.p2	AK166399|Zfp821|75871|zinc finger protein 821	AK155121|Zfp821|75871|zinc finger protein 821	NM_001167946|Zfp821|75871|zinc finger protein 821	AK157971|Zfp821|75871|zinc finger protein 821	AK136168|Zfp821|75871|zinc finger protein 821	AK165387|Zfp821|75871|zinc finger protein 821	BC032193|Zfp821|75871|zinc finger protein 821
mm9_v1_chr14_+_63761507_63761880	0.373317	RUNX1..3.p2	AK201025|Ctsb|13030|cathepsin B	AK201162|Ctsb|13030|cathepsin B	AF062526|Ctsb|13030|cathepsin B
mm9_v1_chr11_-_100355280_100355392	0.373248	RUNX1..3.p2	AK136812|Acly|104112|ATP citrate lyase	AK043434|Acly|104112|ATP citrate lyase
mm9_v1_chr10_+_5151833_5151833	0.372874	RUNX1..3.p2	AK041626|Syne1|64009|synaptic nuclear envelope 1	NM_001079686|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr10_-_80129835_80129910	0.371518	RUNX1..3.p2	AK194807|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr6_+_91706816_91706893	0.36989	RUNX1..3.p2	AK165837|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm9_v1_chr8_+_125914690_125914738	0.368632	RUNX1..3.p2	AK177952|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK179328|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK186829|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)
mm9_v1_chr6_+_85401450_85401503	0.365372	RUNX1..3.p2	NM_007638|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)
mm9_v1_chr9_-_20699140_20699152	0.365001	RUNX1..3.p2	AK214405|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G
mm9_v1_chr3_+_66023808_66023844	0.364631	RUNX1..3.p2	NM_008987|Ptx3|19288|pentraxin related gene	BC022176|Ptx3|19288|pentraxin related gene
mm9_v1_chr17_+_21093929_21094049	0.363393	RUNX1..3.p2	AK178876|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
mm9_v1_chrX_+_139952975_139953253	0.363309	RUNX1..3.p2	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr10_+_77079550_77079583	0.363031	RUNX1..3.p2	
mm9_v1_chr3_-_94276817_94276835	0.35981	RUNX1..3.p2	AK019569|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
mm9_v1_chr10_-_90582332_90582452	0.357795	RUNX1..3.p2	AK195219|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK212727|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK216642|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK180258|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK188364|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm9_v1_chr5_-_122907269_122907331	0.357037	RUNX1..3.p2	AK195483|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK198267|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK202908|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK209825|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC022584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr16_+_92498378_92498391	0.356625	RUNX1..3.p2	BC075706|Clic6|209195|chloride intracellular channel 6	AK077599|Clic6|209195|chloride intracellular channel 6	NM_172469|Clic6|209195|chloride intracellular channel 6
mm9_v1_chr1_+_6792987_6793017	0.355446	RUNX1..3.p2	BC032273|St18|240690|suppression of tumorigenicity 18
mm9_v1_chr19_+_9023469_9023512	0.35361	RUNX1..3.p2	AK180875|Mta2|23942|metastasis-associated gene family, member 2	AK185607|Mta2|23942|metastasis-associated gene family, member 2	AK210254|Mta2|23942|metastasis-associated gene family, member 2	AK211099|Mta2|23942|metastasis-associated gene family, member 2	AK218258|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr1_-_180259336_180259529	0.351911	RUNX1..3.p2	AK049375|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK080656|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr8_+_119984482_119984512	0.350232	RUNX1..3.p2	AK020023|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr15_+_99239412_99239454	0.349006	RUNX1..3.p2	
mm9_v1_chr7_-_148040227_148040484	0.345735	RUNX1..3.p2	BC052402|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	AK003184|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like
mm9_v1_chr17_+_30272123_30272409	0.342702	RUNX1..3.p2	BC027161|Zfand3|21769|zinc finger, AN1-type domain 3	EF437371|Zfand3|21769|zinc finger, AN1-type domain 3	BC024483|Zfand3|21769|zinc finger, AN1-type domain 3
mm9_v1_chr17_+_26792701_26792940	0.340947	RUNX1..3.p2	AK177289|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK191970|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK204835|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr7_+_4094529_4094584	0.340772	RUNX1..3.p2	
mm9_v1_chr2_+_164286735_164286813	0.340491	RUNX1..3.p2	BC061084|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK032098|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	BC053943|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK017524|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm9_v1_chr8_-_11199802_11199859	0.340415	RUNX1..3.p2	X92439|Col4a1|12826|collagen, type IV, alpha 1
mm9_v1_chr19_-_4305954_4306041	0.340088	RUNX1..3.p2	BC053922|Adrbk1|110355|adrenergic receptor kinase, beta 1	NM_130863|Adrbk1|110355|adrenergic receptor kinase, beta 1	BC003196|Adrbk1|110355|adrenergic receptor kinase, beta 1	AF333028|Adrbk1|110355|adrenergic receptor kinase, beta 1
mm9_v1_chr8_+_73222913_73223172	0.338825	RUNX1..3.p2	X15358|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr6_+_42306205_42306207	0.338773	RUNX1..3.p2	AK217332|Zyx|22793|zyxin
mm9_v1_chr13_-_76155834_76156159	0.33795	RUNX1..3.p2	AK029602|Rfesd|218341|Rieske (Fe-S) domain containing	AK163574|Rfesd|218341|Rieske (Fe-S) domain containing	AK040255|Rfesd|218341|Rieske (Fe-S) domain containing	AK083705|Rfesd|218341|Rieske (Fe-S) domain containing	NM_178916|Rfesd|218341|Rieske (Fe-S) domain containing	NM_001131068|Rfesd|218341|Rieske (Fe-S) domain containing	BC030381|Rfesd|218341|Rieske (Fe-S) domain containing	NM_001131069|Rfesd|218341|Rieske (Fe-S) domain containing
mm9_v1_chr4_-_115612507_115612530	0.332712	RUNX1..3.p2	BC050912|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AB037698|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AF448118|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AK141654|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_001025567|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_130865|Dmbx1|140477|diencephalon/mesencephalon homeobox 1
mm9_v1_chrY_+_347036_347061	0.33035	RUNX1..3.p2	AK012186|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AK153974|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AK009448|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AJ006584|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	BC043656|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	NM_012011|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	BC031450|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
mm9_v1_chr17_+_36117612_36117622	0.329158	RUNX1..3.p2	X65026|Gnl1|14670|guanine nucleotide binding protein-like 1
mm9_v1_chr2_-_65405546_65405588	0.32872	RUNX1..3.p2	AK148881|Scn3a|20269|sodium channel, voltage-gated, type III, alpha	NM_018732|Scn3a|20269|sodium channel, voltage-gated, type III, alpha
mm9_v1_chr17_-_56749096_56749193	0.328353	RUNX1..3.p2	BC056164|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	BC049674|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AK075942|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AY091637|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	AK075961|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene	NM_153152|2410015M20Rik|224904|RIKEN cDNA 2410015M20 gene
mm9_v1_chr19_+_8840883_8840977	0.327441	RUNX1..3.p2	AK052937|Nxf1|53319|nuclear RNA export factor 1 homolog (S. cerevisiae)
mm9_v1_chr3_+_28596824_28596914	0.325474	RUNX1..3.p2	AK005068|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	NM_031197|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	AK165430|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	X15684|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	BC034675|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2
mm9_v1_chr4_-_43013064_43013178	0.323099	RUNX1..3.p2	
mm9_v1_chr15_+_82005685_82005731	0.323011	RUNX1..3.p2	AK197179|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr16_-_85015494_85015607	0.322868	RUNX1..3.p2	AK209458|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr3_+_129235284_129235325	0.322765	RUNX1..3.p2	AK087440|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK029029|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	NM_130450|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC051041|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AY053453|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chr7_-_50788540_50788580	0.322101	RUNX1..3.p2	BC132379|Cd33|12489|CD33 antigen	NM_001111058|Cd33|12489|CD33 antigen	NM_021293|Cd33|12489|CD33 antigen
mm9_v1_chr15_-_82237600_82237628	0.320782	RUNX1..3.p2	BC051039|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	M27167|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	BC057924|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	BC010989|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	NM_010005|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	NM_010005|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10
mm9_v1_chr14_+_8767143_8767187	0.320032	RUNX1..3.p2	AK172258|Flnb|286940|filamin, beta
mm9_v1_chr12_-_113749361_113749362	0.317217	RUNX1..3.p2	BC055014|Tmem179|104885|transmembrane protein 179
mm9_v1_chr17_+_56109884_56109905	0.3169	RUNX1..3.p2	AK142491|Shd|20420|src homology 2 domain-containing transforming protein D	NM_001159523|Shd|20420|src homology 2 domain-containing transforming protein D	NM_009168|Shd|20420|src homology 2 domain-containing transforming protein D	AB018423|Shd|20420|src homology 2 domain-containing transforming protein D
mm9_v1_chr10_-_84590718_84590771	0.313984	RUNX1..3.p2	BC046619|Mterfd3|74238|MTERF domain containing 3	AK047778|Mterfd3|74238|MTERF domain containing 3	AK039816|Mterfd3|74238|MTERF domain containing 3	NM_028832|Mterfd3|74238|MTERF domain containing 3
mm9_v1_chr18_+_78012506_78012506	0.313568	RUNX1..3.p2	NM_007505|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr2_+_155213904_155214229	0.312095	RUNX1..3.p2	AK194878|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK201306|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK212674|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK213253|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK188182|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK191290|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK194673|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK204807|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK200413|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK212877|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr11_+_98219742_98219789	0.311542	RUNX1..3.p2	AK155124|Stard3|59045|START domain containing 3	BC058727|Stard3|59045|START domain containing 3	AK160480|Stard3|59045|START domain containing 3	BC003313|Stard3|59045|START domain containing 3
mm9_v1_chr13_+_81796756_81796839	0.311181	RUNX1..3.p2	BC003322|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3	NM_030257|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3	AK029514|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3
mm9_v1_chr2_-_35056195_35056311	0.309038	RUNX1..3.p2	BC009085|Rab14|68365|RAB14, member RAS oncogene family
mm9_v1_chr5_+_77694506_77694565	0.308407	RUNX1..3.p2	AK004945|Rest|19712|RE1-silencing transcription factor	NM_011263|Rest|19712|RE1-silencing transcription factor	AK156514|Rest|19712|RE1-silencing transcription factor
mm9_v1_chr5_-_52576002_52576142	0.306658	RUNX1..3.p2	
mm9_v1_chr11_+_102294276_102294332	0.306243	RUNX1..3.p2	BC037047|Grn|14824|granulin	X62321|Grn|14824|granulin	AK196399|Grn|14824|granulin	AK205747|Grn|14824|granulin
mm9_v1_chr16_+_18877336_18877523	0.305197	RUNX1..3.p2	X92590|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X75295|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X99712|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)
mm9_v1_chr11_-_100576628_100576692	0.304451	RUNX1..3.p2	
mm9_v1_chr18_+_36526187_36526274	0.301252	RUNX1..3.p2	AK003470|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene
mm9_v1_chr2_-_155649645_155649731	0.299802	RUNX1..3.p2	AK212176|Eif6|16418|eukaryotic translation initiation factor 6	AK181580|Eif6|16418|eukaryotic translation initiation factor 6	AK177151|Eif6|16418|eukaryotic translation initiation factor 6	Y11460|Eif6|16418|eukaryotic translation initiation factor 6
mm9_v1_chr9_-_21731973_21732007	0.297482	RUNX1..3.p2	
mm9_v1_chr17_-_57184507_57184537	0.296763	RUNX1..3.p2	BC060049|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr1_-_84741605_84741713	0.296625	RUNX1..3.p2	BC004085|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr1_-_129670601_129670630	0.29643	RUNX1..3.p2	AK013506|2900009J06Rik|72887|RIKEN cDNA 2900009J06 gene
mm9_v1_chr11_-_120422109_120422348	0.294119	RUNX1..3.p2	AK199305|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK207358|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK215989|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK192153|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK198572|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK194021|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK197388|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK198858|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK199711|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK200927|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr5_-_34517234_34517339	0.293654	RUNX1..3.p2	AK013062|Mxd4|17122|Max dimerization protein 4
mm9_v1_chr3_+_95087190_95087293	0.293137	RUNX1..3.p2	
mm9_v1_chr7_+_137789668_137789799	0.292994	RUNX1..3.p2	AK145721|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	AK050985|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	AK137273|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr8_+_125925000_125925050	0.292416	RUNX1..3.p2	
mm9_v1_chr11_+_116295406_116295422	0.292091	RUNX1..3.p2	AK144901|Fam100b|319370|family with sequence similarity 100, member B	NM_176902|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr8_-_72758275_72758364	0.289283	RUNX1..3.p2	BC048396|Armc6|76813|armadillo repeat containing 6	BC043070|Armc6|76813|armadillo repeat containing 6	BC055779|Armc6|76813|armadillo repeat containing 6	NM_133972|Armc6|76813|armadillo repeat containing 6	AK010815|Armc6|76813|armadillo repeat containing 6	AK081550|Armc6|76813|armadillo repeat containing 6
mm9_v1_chr13_+_74075300_74075327	0.288644	RUNX1..3.p2	BC047372|Brd9|105246|bromodomain containing 9	BC057597|Brd9|105246|bromodomain containing 9	BC089379|Brd9|105246|bromodomain containing 9
mm9_v1_chr10_+_79321979_79322100	0.288413	RUNX1..3.p2	BC008531|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr5_+_48374328_48374415	0.288272	RUNX1..3.p2	AK053182|Slit2|20563|slit homolog 2 (Drosophila)	AK053913|Slit2|20563|slit homolog 2 (Drosophila)	AK144573|Slit2|20563|slit homolog 2 (Drosophila)	NM_178804|Slit2|20563|slit homolog 2 (Drosophila)	AK084012|Slit2|20563|slit homolog 2 (Drosophila)	AK084293|Slit2|20563|slit homolog 2 (Drosophila)
mm9_v1_chr12_-_104895307_104895340	0.285709	RUNX1..3.p2	AK145842|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr11_-_102152310_102152512	0.285043	RUNX1..3.p2	AK218190|Atxn7l3|217218|ataxin 7-like 3	AK053165|Atxn7l3|217218|ataxin 7-like 3
mm9_v1_chrY_-_582062_582201	0.284219	RUNX1..3.p2	AK162410|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK220463|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK155922|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AF057367|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	BC053061|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK043154|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	NM_009484|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142344|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142512|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm9_v1_chrX_-_104598466_104598514	0.28421	RUNX1..3.p2	AK014024|Itm2a|16431|integral membrane protein 2A
mm9_v1_chr10_-_80204784_80204803	0.283556	RUNX1..3.p2	AK141789|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr4_+_83063621_83063661	0.283423	RUNX1..3.p2	AK049933|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK016168|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK007563|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK010932|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK031870|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK031924|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	BC048713|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	NM_029949|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK019863|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3
mm9_v1_chr14_-_52530382_52530466	0.283119	RUNX1..3.p2	AK076514|Ndrg2|29811|N-myc downstream regulated gene 2	AK173136|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr11_-_100579201_100579275	0.282969	RUNX1..3.p2	
mm9_v1_chr1_-_170362278_170362289	0.280042	RUNX1..3.p2	AY157976|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr11_-_30119771_30119771	0.278803	RUNX1..3.p2	NM_175836|Spnb2|20742|spectrin beta 2
mm9_v1_chr10_+_127795461_127795537	0.27822	RUNX1..3.p2	DQ403125|Cs|12974|citrate synthase	AK012104|Cs|12974|citrate synthase
mm9_v1_chr5_-_143665474_143665607	0.276941	RUNX1..3.p2	
mm9_v1_chr14_+_120724380_120724561	0.276613	RUNX1..3.p2	BC020406|Mbnl2|105559|muscleblind-like 2	BC026711|Mbnl2|105559|muscleblind-like 2	GQ906534|Mbnl2|105559|muscleblind-like 2	AK216404|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr14_-_55224744_55224800	0.274446	RUNX1..3.p2	BC029624|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene	BC034212|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene	NM_028890|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene	AK163117|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene
mm9_v1_chr7_-_35005681_35005711	0.273678	RUNX1..3.p2	AK152508|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr2_+_152695336_152695453	0.273618	RUNX1..3.p2	AK167030|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK011311|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm9_v1_chrX_-_133267605_133267741	0.273106	RUNX1..3.p2	
mm9_v1_chr11_+_78139476_78139615	0.272435	RUNX1..3.p2	AJ132391|Aldoc|11676|aldolase C, fructose-bisphosphate
mm9_v1_chr14_-_32454146_32454155	0.270883	RUNX1..3.p2	AK041686|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AJ132139|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK050078|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	NM_019975|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr1_+_173319048_173319419	0.270672	RUNX1..3.p2	AK147757|Arhgap30|226652|Rho GTPase activating protein 30	NM_001005508|Arhgap30|226652|Rho GTPase activating protein 30	AK156351|Arhgap30|226652|Rho GTPase activating protein 30	AK030911|Arhgap30|226652|Rho GTPase activating protein 30	BC082573|Arhgap30|226652|Rho GTPase activating protein 30	AK031319|Arhgap30|226652|Rho GTPase activating protein 30
mm9_v1_chr17_+_24546733_24546845	0.270153	RUNX1..3.p2	BC038271|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr8_-_112102961_112102972	0.26987	RUNX1..3.p2	AK159676|Hp|15439|haptoglobin	S67972|Hp|15439|haptoglobin	AK150430|Hp|15439|haptoglobin	AK150830|Hp|15439|haptoglobin	AK152295|Hp|15439|haptoglobin	AK152698|Hp|15439|haptoglobin
mm9_v1_chr10_-_75243786_75243866	0.267844	RUNX1..3.p2	BC003903|Gstt3|103140|glutathione S-transferase, theta 3	AK168226|Gstt3|103140|glutathione S-transferase, theta 3	AK138669|Gstt3|103140|glutathione S-transferase, theta 3	AK154161|Gstt3|103140|glutathione S-transferase, theta 3
mm9_v1_chr11_-_79337251_79337263	0.266861	RUNX1..3.p2	NM_001077496|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr7_+_4095117_4095396	0.266507	RUNX1..3.p2	BC034448|Leng8|232798|leukocyte receptor cluster (LRC) member 8
mm9_v1_chrX_+_35548300_35548338	0.266283	RUNX1..3.p2	AK080301|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr14_-_32454060_32454136	0.265898	RUNX1..3.p2	BC021360|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK161488|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK005505|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr14_+_63754443_63754544	0.265507	RUNX1..3.p2	Y18463|Ctsb|13030|cathepsin B
mm9_v1_chr6_-_83071206_83071410	0.265031	RUNX1..3.p2	AK178117|Wbp1|22377|WW domain binding protein 1	AK179139|Wbp1|22377|WW domain binding protein 1	AK184383|Wbp1|22377|WW domain binding protein 1	BC019889|Wbp1|22377|WW domain binding protein 1	AK076948|Wbp1|22377|WW domain binding protein 1
mm9_v1_chr11_-_50108981_50109027	0.262527	RUNX1..3.p2	AK004422|Canx|12330|calnexin
mm9_v1_chr15_-_90764873_90764944	0.262054	RUNX1..3.p2	AK052821|Kif21a|16564|kinesin family member 21A	AK047208|Kif21a|16564|kinesin family member 21A
mm9_v1_chr5_+_91197542_91197576	0.261583	RUNX1..3.p2	AF219112|Ppbp|57349|pro-platelet basic protein	AF278700|Ppbp|57349|pro-platelet basic protein	AK010273|Ppbp|57349|pro-platelet basic protein	AK157141|Ppbp|57349|pro-platelet basic protein	AK171720|Ppbp|57349|pro-platelet basic protein	NM_023785|Ppbp|57349|pro-platelet basic protein	AK157077|Ppbp|57349|pro-platelet basic protein	AB042817|Ppbp|57349|pro-platelet basic protein	AK158061|Ppbp|57349|pro-platelet basic protein	BC127043|Ppbp|57349|pro-platelet basic protein	BC127044|Ppbp|57349|pro-platelet basic protein
mm9_v1_chr5_-_92872646_92872657	0.25905	RUNX1..3.p2	AK034388|Scarb2|12492|scavenger receptor class B, member 2
mm9_v1_chr6_+_17699145_17699592	0.258221	RUNX1..3.p2	AK079107|St7|64213|suppression of tumorigenicity 7	AK132103|St7|64213|suppression of tumorigenicity 7	AK151550|St7|64213|suppression of tumorigenicity 7	NM_001083315|St7|64213|suppression of tumorigenicity 7	NM_022332|St7|64213|suppression of tumorigenicity 7	BC108418|St7|64213|suppression of tumorigenicity 7	AF234884|St7|64213|suppression of tumorigenicity 7	AF234885|St7|64213|suppression of tumorigenicity 7	AY007794|St7|64213|suppression of tumorigenicity 7	AY007795|St7|64213|suppression of tumorigenicity 7	AK036248|St7|64213|suppression of tumorigenicity 7	BC060630|St7|64213|suppression of tumorigenicity 7	BC051429|St7|64213|suppression of tumorigenicity 7	AY551821|St7|64213|suppression of tumorigenicity 7	AY551822|St7|64213|suppression of tumorigenicity 7	CT010245|St7|64213|suppression of tumorigenicity 7
mm9_v1_chr17_+_83750246_83750339	0.257906	RUNX1..3.p2	AK144604|Eml4|78798|echinoderm microtubule associated protein like 4	NM_001114361|Eml4|78798|echinoderm microtubule associated protein like 4	NM_001114362|Eml4|78798|echinoderm microtubule associated protein like 4	NM_199466|Eml4|78798|echinoderm microtubule associated protein like 4	BC067011|Eml4|78798|echinoderm microtubule associated protein like 4	BC070427|Eml4|78798|echinoderm microtubule associated protein like 4	BC065178|Eml4|78798|echinoderm microtubule associated protein like 4	BC066099|Eml4|78798|echinoderm microtubule associated protein like 4	BC079619|Eml4|78798|echinoderm microtubule associated protein like 4
mm9_v1_chr7_-_28317608_28317617	0.257787	RUNX1..3.p2	AK182880|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr2_+_155215225_155215281	0.256521	RUNX1..3.p2	AK079304|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr3_-_88058593_88058623	0.255192	RUNX1..3.p2	AY254685|Rhbg|58176|Rhesus blood group-associated B glycoprotein	AF193808|Rhbg|58176|Rhesus blood group-associated B glycoprotein	AK081882|Rhbg|58176|Rhesus blood group-associated B glycoprotein	NM_021375|Rhbg|58176|Rhesus blood group-associated B glycoprotein	BC029236|Rhbg|58176|Rhesus blood group-associated B glycoprotein
mm9_v1_chr5_-_115750649_115750671	0.254075	RUNX1..3.p2	BC085492|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr11_+_116704828_116704913	0.253545	RUNX1..3.p2	NM_028865|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	AK135294|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	AK168267|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	BC026936|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene
mm9_v1_chr2_+_162759135_162759161	0.253217	RUNX1..3.p2	AK212807|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr4_+_132754604_132754753	0.252159	RUNX1..3.p2	
mm9_v1_chr2_-_168487517_168487591	0.251734	RUNX1..3.p2	
mm9_v1_chr8_-_72433344_72433376	0.250987	RUNX1..3.p2	AK004386|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr10_-_80170648_80170694	0.250412	RUNX1..3.p2	
mm9_v1_chr13_-_96214609_96214785	0.250192	RUNX1..3.p2	AK139404|Crhbp|12919|corticotropin releasing hormone binding protein	AK157912|Crhbp|12919|corticotropin releasing hormone binding protein	BC061247|Crhbp|12919|corticotropin releasing hormone binding protein	AK135067|Crhbp|12919|corticotropin releasing hormone binding protein	NM_198408|Crhbp|12919|corticotropin releasing hormone binding protein
mm9_v1_chr6_+_83005215_83005221	0.249946	RUNX1..3.p2	AK180069|Aup1|11993|ancient ubiquitous protein 1	AK209976|Aup1|11993|ancient ubiquitous protein 1
mm9_v1_chr16_-_16504310_16504310	0.249925	RUNX1..3.p2	AF402612|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	NM_139233|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4
mm9_v1_chr3_-_65940346_65940359	0.249324	RUNX1..3.p2	AB085189|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	AK013398|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_028357|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)
mm9_v1_chr12_+_17277227_17277235	0.247324	RUNX1..3.p2	AK192703|Pdia6|71853|protein disulfide isomerase associated 6
mm9_v1_chr13_+_51245730_51245816	0.247004	RUNX1..3.p2	
mm9_v1_chr18_+_63112372_63112770	0.246647	RUNX1..3.p2	AK190259|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK191643|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK191811|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK191857|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK192996|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK198042|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AK214514|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	AB023957|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1	BC065780|Apcdd1|494504|adenomatosis polyposis coli down-regulated 1
mm9_v1_chr7_-_52068757_52068869	0.246328	RUNX1..3.p2	AK160085|Atf5|107503|activating transcription factor 5	AY024362|Atf5|107503|activating transcription factor 5
mm9_v1_chr7_+_138122822_138122930	0.245272	RUNX1..3.p2	AK090321|Htra1|56213|HtrA serine peptidase 1
mm9_v1_chr16_+_43640198_43640217	0.243827	RUNX1..3.p2	AK080813|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr10_+_93610663_93610767	0.242863	RUNX1..3.p2	AK146891|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	NM_011629|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK053907|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC090662|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC094580|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK149374|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1
mm9_v1_chr2_+_142904128_142904227	0.242723	RUNX1..3.p2	BC139152|Otor|57329|otoraplin	BC139153|Otor|57329|otoraplin	AK047965|Otor|57329|otoraplin	AJ243939|Otor|57329|otoraplin	AF243504|Otor|57329|otoraplin	NM_020595|Otor|57329|otoraplin
mm9_v1_chr6_+_108015037_108015048	0.242656	RUNX1..3.p2	AK017895|Setmar|74729|SET domain and mariner transposase fusion gene	NM_178391|Setmar|74729|SET domain and mariner transposase fusion gene	BC045208|Setmar|74729|SET domain and mariner transposase fusion gene
mm9_v1_chrX_-_98280689_98280743	0.242354	RUNX1..3.p2	BC050195|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	NM_007515|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	U70859|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	AK165931|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	AK077593|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	AK141558|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
mm9_v1_chr15_-_76479476_76479559	0.241972	RUNX1..3.p2	BC039646|Cyhr1|54151|cysteine and histidine rich 1
mm9_v1_chr3_+_128902822_128902860	0.241821	RUNX1..3.p2	AB006321|Pitx2|18741|paired-like homeodomain transcription factor 2	NM_011098|Pitx2|18741|paired-like homeodomain transcription factor 2	NM_001042504|Pitx2|18741|paired-like homeodomain transcription factor 2	U80011|Pitx2|18741|paired-like homeodomain transcription factor 2	U80036|Pitx2|18741|paired-like homeodomain transcription factor 2	AF048723|Pitx2|18741|paired-like homeodomain transcription factor 2	U80010|Pitx2|18741|paired-like homeodomain transcription factor 2
mm9_v1_chr2_+_150396150_150396221	0.240774	RUNX1..3.p2	AK004420|Cst7|13011|cystatin F (leukocystatin)	NM_009977|Cst7|13011|cystatin F (leukocystatin)	BC117047|Cst7|13011|cystatin F (leukocystatin)	BC117049|Cst7|13011|cystatin F (leukocystatin)	AB015224|Cst7|13011|cystatin F (leukocystatin)	AK170583|Cst7|13011|cystatin F (leukocystatin)	AF031825|Cst7|13011|cystatin F (leukocystatin)
mm9_v1_chr1_+_43787537_43787625	0.24041	RUNX1..3.p2	BC002254|1500015O10Rik|78896|RIKEN cDNA 1500015O10 gene
mm9_v1_chr6_+_48986501_48986620	0.238172	RUNX1..3.p2	NM_053110|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK171517|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK149740|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK154617|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK159270|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK159165|Gpnmb|93695|glycoprotein (transmembrane) nmb	AK170506|Gpnmb|93695|glycoprotein (transmembrane) nmb
mm9_v1_chr8_+_96915646_96915690	0.236946	RUNX1..3.p2	AK181286|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK216036|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
mm9_v1_chr18_+_34475207_34475256	0.236243	RUNX1..3.p2	AK142170|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr10_+_21712008_21712034	0.235997	RUNX1..3.p2	NM_001161849|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr11_-_106646516_106646611	0.235802	RUNX1..3.p2	AK219348|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr1_-_42749940_42749978	0.235645	RUNX1..3.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr11_+_97698879_97698931	0.234738	RUNX1..3.p2	AK179064|Lasp1|16796|LIM and SH3 protein 1	AK206302|Lasp1|16796|LIM and SH3 protein 1	AK212158|Lasp1|16796|LIM and SH3 protein 1	AK213957|Lasp1|16796|LIM and SH3 protein 1
mm9_v1_chr14_+_21537992_21538048	0.233005	RUNX1..3.p2	BC030914|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene
mm9_v1_chr19_+_4150733_4150819	0.231571	RUNX1..3.p2	AK205268|Coro1b|23789|coronin, actin binding protein 1B
mm9_v1_chr18_-_32297813_32297870	0.231093	RUNX1..3.p2	AF318182|Proc|19123|protein C	BC013896|Proc|19123|protein C	NM_001042768|Proc|19123|protein C	NM_008934|Proc|19123|protein C
mm9_v1_chr11_-_69730589_69730837	0.231039	RUNX1..3.p2	AK207553|Eif5a|276770|eukaryotic translation initiation factor 5A	AK211666|Eif5a|276770|eukaryotic translation initiation factor 5A	AK217079|Eif5a|276770|eukaryotic translation initiation factor 5A	AK189636|Eif5a|276770|eukaryotic translation initiation factor 5A	AK201607|Eif5a|276770|eukaryotic translation initiation factor 5A	AK213375|Eif5a|276770|eukaryotic translation initiation factor 5A	AK218644|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr11_+_82878590_82878700	0.23101	RUNX1..3.p2	AF099973|Slfn2|20556|schlafen 2	NM_011408|Slfn2|20556|schlafen 2	BC138749|Slfn2|20556|schlafen 2	BC138750|Slfn2|20556|schlafen 2
mm9_v1_chr1_+_89991575_89991689	0.230626	RUNX1..3.p2	NM_201642|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK159496|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK128918|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK162317|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK165465|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK154973|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	BC141205|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	BC141206|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AY227199|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK144599|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK153157|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C
mm9_v1_chr9_-_55983967_55984081	0.228693	RUNX1..3.p2	AK212733|Tspan3|56434|tetraspanin 3	AK206202|Tspan3|56434|tetraspanin 3	AK211000|Tspan3|56434|tetraspanin 3	AK216580|Tspan3|56434|tetraspanin 3	AK219763|Tspan3|56434|tetraspanin 3	AK219867|Tspan3|56434|tetraspanin 3	AK206891|Tspan3|56434|tetraspanin 3	AK219936|Tspan3|56434|tetraspanin 3
mm9_v1_chr8_+_93352723_93352742	0.227724	RUNX1..3.p2	AK034446|Chd9|109151|chromodomain helicase DNA binding protein 9	NM_177224|Chd9|109151|chromodomain helicase DNA binding protein 9	AK039562|Chd9|109151|chromodomain helicase DNA binding protein 9	DQ127229|Chd9|109151|chromodomain helicase DNA binding protein 9
mm9_v1_chr4_+_55093796_55093934	0.227183	RUNX1..3.p2	AK035041|Zfp462|242466|zinc finger protein 462
mm9_v1_chr4_-_109960078_109960115	0.227124	RUNX1..3.p2	BC052451|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AF041342|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK079088|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001038698|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr6_-_51416921_51416984	0.225708	RUNX1..3.p2	BC059107|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr10_+_34018323_34018472	0.22419	RUNX1..3.p2	AK028517|Tspyl4|72480|TSPY-like 4
mm9_v1_chr6_-_87622057_87622161	0.223345	RUNX1..3.p2	BC002179|Aplf|72103|aprataxin and PNKP like factor	AK078805|Aplf|72103|aprataxin and PNKP like factor	AK034191|Aplf|72103|aprataxin and PNKP like factor	AK008513|Aplf|72103|aprataxin and PNKP like factor	NM_001170489|Aplf|72103|aprataxin and PNKP like factor	NM_024251|Aplf|72103|aprataxin and PNKP like factor
mm9_v1_chrX_+_71549202_71549226	0.223151	RUNX1..3.p2	
mm9_v1_chr16_+_10742336_10742473	0.222153	RUNX1..3.p2	AK028051|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr19_+_4214369_4214416	0.221339	RUNX1..3.p2	AK170969|Clcf1|56708|cardiotrophin-like cytokine factor 1	AK166421|Clcf1|56708|cardiotrophin-like cytokine factor 1	AF176913|Clcf1|56708|cardiotrophin-like cytokine factor 1	NM_019952|Clcf1|56708|cardiotrophin-like cytokine factor 1	BC104258|Clcf1|56708|cardiotrophin-like cytokine factor 1	BC104259|Clcf1|56708|cardiotrophin-like cytokine factor 1
mm9_v1_chr11_-_106175797_106175983	0.221265	RUNX1..3.p2	CT010358|Cd79b|15985|CD79B antigen	AK143573|Cd79b|15985|CD79B antigen	BC012226|Cd79b|15985|CD79B antigen	NM_008339|Cd79b|15985|CD79B antigen	J03857|Cd79b|15985|CD79B antigen
mm9_v1_chr8_-_122071463_122071711	0.21961	RUNX1..3.p2	AF094820|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	DQ913734|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK210818|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC054837|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr13_-_46060354_46060386	0.219349	RUNX1..3.p2	AK165114|Atxn1|20238|ataxin 1	AK037692|Atxn1|20238|ataxin 1
mm9_v1_chr8_+_11512952_11512959	0.218951	RUNX1..3.p2	AK217371|Carkd|69225|carbohydrate kinase domain containing
mm9_v1_chr8_-_87369780_87369877	0.218926	RUNX1..3.p2	
mm9_v1_chr1_+_154802144_154802177	0.218461	RUNX1..3.p2	AK129155|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr2_+_172219293_172219452	0.218363	RUNX1..3.p2	AK089450|Cass4|320664|Cas scaffolding protein family member 4	AK170726|Cass4|320664|Cas scaffolding protein family member 4	NM_001033538|Cass4|320664|Cas scaffolding protein family member 4	AK036419|Cass4|320664|Cas scaffolding protein family member 4	AK080960|Cass4|320664|Cas scaffolding protein family member 4	BC117858|Cass4|320664|Cas scaffolding protein family member 4	BC117859|Cass4|320664|Cas scaffolding protein family member 4	BC129976|Cass4|320664|Cas scaffolding protein family member 4	BC129975|Cass4|320664|Cas scaffolding protein family member 4	NM_001080820|Cass4|320664|Cas scaffolding protein family member 4
mm9_v1_chr11_+_100488379_100488445	0.218068	RUNX1..3.p2	
mm9_v1_chr11_+_87912647_87912677	0.217405	RUNX1..3.p2	NM_198013|Cuedc1|103841|CUE domain containing 1
mm9_v1_chr12_-_74147683_74147691	0.216397	RUNX1..3.p2	BC023304|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chr2_-_142727172_142727216	0.215241	RUNX1..3.p2	NM_001081133|Kif16b|16558|kinesin family member 16B
mm9_v1_chr7_-_118214471_118214595	0.213643	RUNX1..3.p2	AK153701|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2
mm9_v1_chr13_+_41012969_41013020	0.213551	RUNX1..3.p2	AY236875|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_133219|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK019924|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	BC054845|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr7_-_134519509_134519563	0.213411	RUNX1..3.p2	BC058799|Zfp747|269997|zinc finger protein 747	AK032584|Zfp747|269997|zinc finger protein 747	AK042972|Zfp747|269997|zinc finger protein 747	NM_175560|Zfp747|269997|zinc finger protein 747
mm9_v1_chr12_+_86474651_86474814	0.213154	RUNX1..3.p2	AK218097|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK201762|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK202210|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK205589|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK206354|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK207941|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK209363|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK210896|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK219425|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK186759|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
mm9_v1_chr4_+_44943967_44944033	0.212357	RUNX1..3.p2	AK013088|Zcchc7|319885|zinc finger, CCHC domain containing 7
mm9_v1_chr5_-_101001209_101001243	0.212007	RUNX1..3.p2	AF263458|Plac8|231507|placenta-specific 8	AK007369|Plac8|231507|placenta-specific 8	NM_139198|Plac8|231507|placenta-specific 8	AJ422151|Plac8|231507|placenta-specific 8
mm9_v1_chr3_+_95086814_95087156	0.211466	RUNX1..3.p2	NM_133858|Fam63a|75007|family with sequence similarity 63, member A	NM_199475|Fam63a|75007|family with sequence similarity 63, member A	AK169673|Fam63a|75007|family with sequence similarity 63, member A	AK036838|Fam63a|75007|family with sequence similarity 63, member A	BC094388|Fam63a|75007|family with sequence similarity 63, member A	AK087859|Fam63a|75007|family with sequence similarity 63, member A	AK162551|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr7_+_30644997_30645134	0.210662	RUNX1..3.p2	NM_172740|Zfp420|233058|zinc finger protein 420	AK029387|Zfp420|233058|zinc finger protein 420	AK045435|Zfp420|233058|zinc finger protein 420	BC050249|Zfp420|233058|zinc finger protein 420	BC055817|Zfp420|233058|zinc finger protein 420	AK045821|Zfp420|233058|zinc finger protein 420
mm9_v1_chr1_+_187251960_187252031	0.210493	RUNX1..3.p2	AK166460|Eprs|107508|glutamyl-prolyl-tRNA synthetase
mm9_v1_chr1_+_173155184_173155238	0.210476	RUNX1..3.p2	NM_013474|Apoa2|11807|apolipoprotein A-II	M79361|Apoa2|11807|apolipoprotein A-II	M79362|Apoa2|11807|apolipoprotein A-II	AK145823|Apoa2|11807|apolipoprotein A-II	X62772|Apoa2|11807|apolipoprotein A-II	BC031786|Apoa2|11807|apolipoprotein A-II
mm9_v1_chr1_+_184695026_184695133	0.209232	RUNX1..3.p2	BC021842|Susd4|96935|sushi domain containing 4	NM_144796|Susd4|96935|sushi domain containing 4	AK035779|Susd4|96935|sushi domain containing 4	AK088629|Susd4|96935|sushi domain containing 4
mm9_v1_chr10_-_127984766_127984851	0.208521	RUNX1..3.p2	AK050662|Zc3h10|103284|zinc finger CCCH type containing 10	BC022677|Zc3h10|103284|zinc finger CCCH type containing 10	NM_134003|Zc3h10|103284|zinc finger CCCH type containing 10	AK031312|Zc3h10|103284|zinc finger CCCH type containing 10
mm9_v1_chr14_+_56372605_56372670	0.207814	RUNX1..3.p2	AK208092|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene
mm9_v1_chr5_-_34517575_34517643	0.207216	RUNX1..3.p2	
mm9_v1_chr2_+_181287207_181287250	0.206756	RUNX1..3.p2	AK135001|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5
mm9_v1_chr10_+_128258826_128258995	0.206149	RUNX1..3.p2	NM_025364|Sarnp|66118|SAP domain containing ribonucleoprotein	AK146248|Sarnp|66118|SAP domain containing ribonucleoprotein	AK018773|Sarnp|66118|SAP domain containing ribonucleoprotein	BC157909|Sarnp|66118|SAP domain containing ribonucleoprotein	BC158023|Sarnp|66118|SAP domain containing ribonucleoprotein	BC172063|Sarnp|66118|SAP domain containing ribonucleoprotein	AK003453|Sarnp|66118|SAP domain containing ribonucleoprotein	AK088266|Sarnp|66118|SAP domain containing ribonucleoprotein	BC027510|Sarnp|66118|SAP domain containing ribonucleoprotein	BC094393|Sarnp|66118|SAP domain containing ribonucleoprotein	AK212934|Sarnp|66118|SAP domain containing ribonucleoprotein
mm9_v1_chr7_-_127038916_127038971	0.204629	RUNX1..3.p2	AK029043|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	NM_173408|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm9_v1_chr1_+_154802198_154802230	0.203906	RUNX1..3.p2	BC089007|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	NM_175460|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr19_-_5843912_5843983	0.202181	RUNX1..3.p2	
mm9_v1_chr8_-_73174451_73174575	0.201429	RUNX1..3.p2	
mm9_v1_chr6_+_57530968_57531087	0.201389	RUNX1..3.p2	NM_025992|Herc6|67138|hect domain and RLD 6	AK149648|Herc6|67138|hect domain and RLD 6	AK147960|Herc6|67138|hect domain and RLD 6	AK011047|Herc6|67138|hect domain and RLD 6
mm9_v1_chr7_-_106628533_106628572	0.201042	RUNX1..3.p2	
mm9_v1_chr11_-_115209705_115209756	0.201022	RUNX1..3.p2	
mm9_v1_chr5_+_34892224_34892336	0.200766	RUNX1..3.p2	AK143548|Sh3bp2|24055|SH3-domain binding protein 2	NM_001145859|Sh3bp2|24055|SH3-domain binding protein 2	BC085497|Sh3bp2|24055|SH3-domain binding protein 2	NM_001136088|Sh3bp2|24055|SH3-domain binding protein 2
mm9_v1_chr17_+_4995073_4995073	0.200727	RUNX1..3.p2	NM_001085355|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr5_+_65522325_65522469	0.200584	RUNX1..3.p2	BC057606|Klhl5|71778|kelch-like 5 (Drosophila)	NM_175174|Klhl5|71778|kelch-like 5 (Drosophila)
mm9_v1_chr9_+_108417075_108417146	0.200313	RUNX1..3.p2	BC018274|Qars|97541|glutaminyl-tRNA synthetase	AK189247|Qars|97541|glutaminyl-tRNA synthetase
mm9_v1_chr11_+_20548192_20548490	0.198989	RUNX1..3.p2	AF366403|Sertad2|58172|SERTA domain containing 2	AK129059|Sertad2|58172|SERTA domain containing 2	BC008257|Sertad2|58172|SERTA domain containing 2	AK195500|Sertad2|58172|SERTA domain containing 2
mm9_v1_chr8_-_3694155_3694179	0.198766	RUNX1..3.p2	M99371|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	AK080159|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	M34163|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	NM_013517|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	AK156654|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	AK172591|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide
mm9_v1_chr9_+_81757308_81757350	0.198446	RUNX1..3.p2	BC096613|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK082395|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK166209|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK043929|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	NM_175213|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)
mm9_v1_chr4_-_42993205_42993326	0.198194	RUNX1..3.p2	AK217741|Vcp|269523|valosin containing protein	AK209181|Vcp|269523|valosin containing protein
mm9_v1_chr4_-_132383213_132383408	0.197731	RUNX1..3.p2	AK198369|Ppp1r8|100336|protein phosphatase 1, regulatory (inhibitor) subunit 8
mm9_v1_chr4_+_45811893_45811934	0.197195	RUNX1..3.p2	NM_028270|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK088396|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	BC086768|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1
mm9_v1_chr9_-_49311823_49311910	0.197111	RUNX1..3.p2	X07233|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr7_-_49897957_49897973	0.196916	RUNX1..3.p2	AK162659|C330019L16Rik|208111|RIKEN cDNA C330019L16 gene	NM_001034857|C330019L16Rik|208111|RIKEN cDNA C330019L16 gene	AK141688|C330019L16Rik|208111|RIKEN cDNA C330019L16 gene
mm9_v1_chr6_+_47827535_47827591	0.195959	RUNX1..3.p2	NM_146175|Zfp282|101095|zinc finger protein 282	AK088531|Zfp282|101095|zinc finger protein 282	AK148038|Zfp282|101095|zinc finger protein 282
mm9_v1_chr16_-_88708151_88708206	0.195891	RUNX1..3.p2	BC133700|2310061N02Rik|69661|RIKEN cDNA 2310061N02 gene	AK010010|2310061N02Rik|69661|RIKEN cDNA 2310061N02 gene	NM_027155|2310061N02Rik|69661|RIKEN cDNA 2310061N02 gene
mm9_v1_chr6_-_83725776_83725818	0.195245	RUNX1..3.p2	AK157834|Tex261|21766|testis expressed gene 261	NM_009357|Tex261|21766|testis expressed gene 261
mm9_v1_chr2_+_119177025_119177036	0.194495	RUNX1..3.p2	AK007378|Chac1|69065|ChaC, cation transport regulator-like 1 (E. coli)	BC025169|Chac1|69065|ChaC, cation transport regulator-like 1 (E. coli)
mm9_v1_chr1_-_170362298_170362315	0.194133	RUNX1..3.p2	AK045252|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144346|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144446|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr14_+_66915902_66915902	0.194114	RUNX1..3.p2	AK003000|Trim35|66854|tripartite motif-containing 35	AK020775|Trim35|66854|tripartite motif-containing 35
mm9_v1_chr7_+_26471968_26472056	0.193991	RUNX1..3.p2	AJ009862|Tgfb1|21803|transforming growth factor, beta 1	NM_011577|Tgfb1|21803|transforming growth factor, beta 1	AK144163|Tgfb1|21803|transforming growth factor, beta 1
mm9_v1_chrX_+_20427050_20427089	0.193156	RUNX1..3.p2	AB158252|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr7_-_150646758_150646786	0.192613	RUNX1..3.p2	U20553|Cdkn1c|12577|cyclin-dependent kinase inhibitor 1C (P57)
mm9_v1_chr19_-_6932673_6932702	0.190338	RUNX1..3.p2	BC151001|Ccdc88b|78317|coiled-coil domain containing 88B	BC151009|Ccdc88b|78317|coiled-coil domain containing 88B	BC157946|Ccdc88b|78317|coiled-coil domain containing 88B	NM_001081291|Ccdc88b|78317|coiled-coil domain containing 88B
mm9_v1_chr11_+_119089885_119089918	0.189835	RUNX1..3.p2	AK046971|Ccdc40|207607|coiled-coil domain containing 40	NM_175430|Ccdc40|207607|coiled-coil domain containing 40	BC072591|Ccdc40|207607|coiled-coil domain containing 40	BC085159|Ccdc40|207607|coiled-coil domain containing 40
mm9_v1_chr7_-_112706892_112707045	0.189562	RUNX1..3.p2	
mm9_v1_chr19_-_4009873_4009922	0.189058	RUNX1..3.p2	AK218269|Ndufv1|17995|NADH dehydrogenase (ubiquinone) flavoprotein 1
mm9_v1_chr12_+_37040755_37040991	0.18894	RUNX1..3.p2	NM_025312|Sostdc1|66042|sclerostin domain containing 1	AK002240|Sostdc1|66042|sclerostin domain containing 1	AK002396|Sostdc1|66042|sclerostin domain containing 1	AK007893|Sostdc1|66042|sclerostin domain containing 1	AK007967|Sostdc1|66042|sclerostin domain containing 1	AY255635|Sostdc1|66042|sclerostin domain containing 1	AY134666|Sostdc1|66042|sclerostin domain containing 1	BC021458|Sostdc1|66042|sclerostin domain containing 1	AB059271|Sostdc1|66042|sclerostin domain containing 1	AK007935|Sostdc1|66042|sclerostin domain containing 1
mm9_v1_chr7_-_77511242_77511282	0.187567	RUNX1..3.p2	AK012573|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK012322|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr10_+_19076344_19076344	0.187457	RUNX1..3.p2	NM_053008|Olig3|94222|oligodendrocyte transcription factor 3
mm9_v1_chr11_+_119961534_119961626	0.186643	RUNX1..3.p2	
mm9_v1_chr6_+_49773596_49773680	0.185896	RUNX1..3.p2	AF273768|Npy|109648|neuropeptide Y	AF286198|Npy|109648|neuropeptide Y	AF286199|Npy|109648|neuropeptide Y
mm9_v1_chr15_-_43701569_43701581	0.184909	RUNX1..3.p2	BC076589|Tmem74|239408|transmembrane protein 74	AK046420|Tmem74|239408|transmembrane protein 74	NM_175502|Tmem74|239408|transmembrane protein 74	AK045145|Tmem74|239408|transmembrane protein 74
mm9_v1_chr10_-_17635007_17635085	0.184605	RUNX1..3.p2	BC094026|Heca|380629|headcase homolog (Drosophila)	AK134782|Heca|380629|headcase homolog (Drosophila)
mm9_v1_chr2_+_164286416_164286607	0.184476	RUNX1..3.p2	AK007882|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	NM_025575|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK139605|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK011753|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK003071|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK013220|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK032073|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK009684|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK075770|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005510|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK148305|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005249|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm9_v1_chr15_-_83294927_83295004	0.184225	RUNX1..3.p2	BC023502|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2
mm9_v1_chr19_-_41674337_41674343	0.184136	RUNX1..3.p2	
mm9_v1_chrX_+_134106087_134106137	0.182461	RUNX1..3.p2	AF284437|Il1rapl2|60367|interleukin 1 receptor accessory protein-like 2	NM_030688|Il1rapl2|60367|interleukin 1 receptor accessory protein-like 2	BC119274|Il1rapl2|60367|interleukin 1 receptor accessory protein-like 2	BC120555|Il1rapl2|60367|interleukin 1 receptor accessory protein-like 2
mm9_v1_chr5_+_125365789_125365870	0.182404	RUNX1..3.p2	BC096550|Zfp664|269704|zinc finger protein 664
mm9_v1_chr15_+_86025174_86025178	0.182074	RUNX1..3.p2	
mm9_v1_chrX_+_155897056_155897081	0.181591	RUNX1..3.p2	AK019929|Mtap7d2|78283|MAP7 domain containing 2	AK031868|Mtap7d2|78283|MAP7 domain containing 2	AK043342|Mtap7d2|78283|MAP7 domain containing 2
mm9_v1_chr14_-_70751120_70751274	0.181089	RUNX1..3.p2	AK158096|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AB177995|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	BC021530|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135151|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_144808|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr11_-_70051346_70051356	0.18067	RUNX1..3.p2	BC055357|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr9_-_89594389_89594428	0.180577	RUNX1..3.p2	AK208137|Tmed3|66111|transmembrane emp24 domain containing 3	AK211505|Tmed3|66111|transmembrane emp24 domain containing 3	AK212102|Tmed3|66111|transmembrane emp24 domain containing 3	AK217166|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chrX_+_90531783_90531984	0.180235	RUNX1..3.p2	AB006103|Arx|11878|aristaless related homeobox	BC052033|Arx|11878|aristaless related homeobox	NM_007492|Arx|11878|aristaless related homeobox
mm9_v1_chr9_+_66561492_66561635	0.180171	RUNX1..3.p2	NM_178396|Car12|76459|carbonic anyhydrase 12	AK052639|Car12|76459|carbonic anyhydrase 12	AK157977|Car12|76459|carbonic anyhydrase 12	AK037694|Car12|76459|carbonic anyhydrase 12	AK166132|Car12|76459|carbonic anyhydrase 12	BC031385|Car12|76459|carbonic anyhydrase 12	BC035941|Car12|76459|carbonic anyhydrase 12	AK170859|Car12|76459|carbonic anyhydrase 12	BC033432|Car12|76459|carbonic anyhydrase 12
mm9_v1_chr14_+_63761085_63761315	0.179073	RUNX1..3.p2	X54966|Ctsb|13030|cathepsin B
mm9_v1_chr8_+_93400479_93400562	0.178547	RUNX1..3.p2	
mm9_v1_chr9_+_64026089_64026214	0.178042	RUNX1..3.p2	
mm9_v1_chr7_-_20262106_20262119	0.178019	RUNX1..3.p2	AK146468|Apoc2|11813|apolipoprotein C-II	Z15090|Apoc2|11813|apolipoprotein C-II
mm9_v1_chr10_-_40021983_40022002	0.177995	RUNX1..3.p2	AK146840|Amd1|11702|S-adenosylmethionine decarboxylase 1	AK166187|Amd1|11702|S-adenosylmethionine decarboxylase 1	AK168165|Amd1|11702|S-adenosylmethionine decarboxylase 1	AK171238|Amd1|11702|S-adenosylmethionine decarboxylase 1	D12780|Amd1|11702|S-adenosylmethionine decarboxylase 1	NM_007444|Amd2|100041585|S-adenosylmethionine decarboxylase 2	NM_009665|Amd1|11702|S-adenosylmethionine decarboxylase 1
mm9_v1_chr18_+_32056465_32056564	0.177547	RUNX1..3.p2	BC003939|Wdr33|74320|WD repeat domain 33
mm9_v1_chr10_+_127691166_127691233	0.176866	RUNX1..3.p2	NM_133996|Apon|28194|apolipoprotein N	AK083289|Apon|28194|apolipoprotein N
mm9_v1_chr14_-_27489331_27489368	0.175898	RUNX1..3.p2	BC064450|Pde12|211948|phosphodiesterase 12	NM_178668|Pde12|211948|phosphodiesterase 12	AK161083|Pde12|211948|phosphodiesterase 12
mm9_v1_chr4_-_91042997_91043190	0.175671	RUNX1..3.p2	AK149201|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	AK141919|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001177883|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr16_+_17233664_17233756	0.175553	RUNX1..3.p2	AK157276|Hic2|58180|hypermethylated in cancer 2	AK156332|Hic2|58180|hypermethylated in cancer 2	NM_178922|Hic2|58180|hypermethylated in cancer 2	BC065124|Hic2|58180|hypermethylated in cancer 2	AK129266|Hic2|58180|hypermethylated in cancer 2	AK084975|Hic2|58180|hypermethylated in cancer 2
mm9_v1_chr4_+_140566594_140566619	0.175548	RUNX1..3.p2	AK164920|Mfap2|17150|microfibrillar-associated protein 2	L23769|Mfap2|17150|microfibrillar-associated protein 2	BC035490|Mfap2|17150|microfibrillar-associated protein 2
mm9_v1_chr2_+_156588506_156588592	0.175481	RUNX1..3.p2	AK179758|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	AK186004|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)
mm9_v1_chr1_-_87633103_87633180	0.175471	RUNX1..3.p2	BC052931|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene	AK041324|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene	AK041675|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene	NM_177055|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene
mm9_v1_chrX_-_7000037_7000113	0.175434	RUNX1..3.p2	BC072610|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	AF038507|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	AK008437|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene
mm9_v1_chr2_-_37558794_37558806	0.174847	RUNX1..3.p2	BC014710|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr9_+_37296867_37296905	0.174821	RUNX1..3.p2	BC066002|BC024479|235184|cDNA sequence BC024479	NM_146222|BC024479|235184|cDNA sequence BC024479
mm9_v1_chr3_+_88383805_88383814	0.174255	RUNX1..3.p2	
mm9_v1_chr14_+_120724163_120724175	0.173755	RUNX1..3.p2	BC075665|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr10_-_116782524_116782604	0.173695	RUNX1..3.p2	AK086495|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr15_+_103129767_103129829	0.173567	RUNX1..3.p2	
mm9_v1_chr3_-_144372258_144372323	0.173565	RUNX1..3.p2	AK178501|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)
mm9_v1_chr18_+_80409068_80409205	0.172641	RUNX1..3.p2	AK183256|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr3_+_100726415_100726537	0.172558	RUNX1..3.p2	AK150574|Trim45|229644|tripartite motif-containing 45	AK153571|Trim45|229644|tripartite motif-containing 45	NM_001165952|Trim45|229644|tripartite motif-containing 45	NM_001165953|Trim45|229644|tripartite motif-containing 45	NM_194343|Trim45|229644|tripartite motif-containing 45	BC057358|Trim45|229644|tripartite motif-containing 45
mm9_v1_chr9_+_44205032_44205053	0.172132	RUNX1..3.p2	AK147849|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chr10_-_80170504_80170531	0.172002	RUNX1..3.p2	AK205331|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr5_+_103854200_103854274	0.171159	RUNX1..3.p2	AK014577|Ptpn13|19249|protein tyrosine phosphatase, non-receptor type 13	AK080313|Ptpn13|19249|protein tyrosine phosphatase, non-receptor type 13	NM_011204|Ptpn13|19249|protein tyrosine phosphatase, non-receptor type 13	BC023913|Ptpn13|19249|protein tyrosine phosphatase, non-receptor type 13	BC057205|Ptpn13|19249|protein tyrosine phosphatase, non-receptor type 13	AK143394|Ptpn13|19249|protein tyrosine phosphatase, non-receptor type 13	AK084198|Ptpn13|19249|protein tyrosine phosphatase, non-receptor type 13
mm9_v1_chr19_+_46077927_46078032	0.170572	RUNX1..3.p2	NM_176785|Hps6|20170|Hermansky-Pudlak syndrome 6	AK030582|Hps6|20170|Hermansky-Pudlak syndrome 6	AK159588|Hps6|20170|Hermansky-Pudlak syndrome 6	AK040849|Hps6|20170|Hermansky-Pudlak syndrome 6	BC034055|Hps6|20170|Hermansky-Pudlak syndrome 6	AF536239|Hps6|20170|Hermansky-Pudlak syndrome 6
mm9_v1_chr1_-_170362244_170362272	0.170372	RUNX1..3.p2	BC054376|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK037006|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr19_+_5568045_5568150	0.169469	RUNX1..3.p2	AK144121|Gm962|381201|predicted gene 962	NM_001033448|Gm962|381201|predicted gene 962	BC147482|Gm962|381201|predicted gene 962
mm9_v1_chr12_+_111805938_111806039	0.169405	RUNX1..3.p2	AK047089|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK178752|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK196801|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK201559|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK211769|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr2_+_172978566_172978589	0.169356	RUNX1..3.p2	AK028046|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	AK080261|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	AK133496|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	AK149525|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	NM_011044|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	AK030327|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	BC028342|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	BC037629|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic
mm9_v1_chr3_-_132613006_132613178	0.168947	RUNX1..3.p2	AF397007|Npnt|114249|nephronectin	AF397008|Npnt|114249|nephronectin	AY035898|Npnt|114249|nephronectin	AY035899|Npnt|114249|nephronectin	BC068308|Npnt|114249|nephronectin	AK050484|Npnt|114249|nephronectin
mm9_v1_chr5_+_104864168_104864178	0.168448	RUNX1..3.p2	AK151069|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr6_-_87740264_87740322	0.168241	RUNX1..3.p2	AK050098|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr14_-_59984246_59984326	0.167955	RUNX1..3.p2	BC145673|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed	BC110663|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed	AK156583|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed	NM_199015|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed
mm9_v1_chr13_-_56279929_56280053	0.167432	RUNX1..3.p2	BC005528|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	AK153654|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	BC031130|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	AK170349|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B
mm9_v1_chr4_-_57929087_57929168	0.167419	RUNX1..3.p2	BC030929|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK085537|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	BC095953|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	NM_178727|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK035369|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene
mm9_v1_chr8_-_112102946_112102953	0.166799	RUNX1..3.p2	BC138872|Hp|15439|haptoglobin	M96827|Hp|15439|haptoglobin
mm9_v1_chr16_-_94509462_94509462	0.166605	RUNX1..3.p2	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr11_+_115891682_115891695	0.165916	RUNX1..3.p2	BC054452|Unk|217331|unkempt homolog (Drosophila)
mm9_v1_chr14_+_84933363_84933455	0.165891	RUNX1..3.p2	AK045478|Pcdh17|219228|protocadherin 17	AK079626|Pcdh17|219228|protocadherin 17	AK046505|Pcdh17|219228|protocadherin 17	AK047338|Pcdh17|219228|protocadherin 17
mm9_v1_chr17_+_34272535_34272615	0.165665	RUNX1..3.p2	AK160460|H2-DMa|14998|histocompatibility 2, class II, locus DMa	BC001996|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X62742|H2-DMa|14998|histocompatibility 2, class II, locus DMa	AK169900|H2-DMa|14998|histocompatibility 2, class II, locus DMa	BC049992|H2-DMa|14998|histocompatibility 2, class II, locus DMa	NM_010386|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35324|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35325|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35326|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35327|H2-DMa|14998|histocompatibility 2, class II, locus DMa	U35328|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90783|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90784|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90785|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90786|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90787|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90788|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90789|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90790|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90791|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90792|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90793|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90794|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90795|H2-DMa|14998|histocompatibility 2, class II, locus DMa	X90963|H2-DMa|14998|histocompatibility 2, class II, locus DMa
mm9_v1_chr7_-_87550315_87550316	0.165579	RUNX1..3.p2	AK020294|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_001081454|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr14_-_73762933_73762949	0.165096	RUNX1..3.p2	AK002796|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr14_+_58042878_58042962	0.16419	RUNX1..3.p2	AK160633|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	NM_009376|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	AK135110|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	BC012250|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	AK168395|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)	L31959|Ift88|21821|intraflagellar transport 88 homolog (Chlamydomonas)
mm9_v1_chr6_-_40535762_40535819	0.164054	RUNX1..3.p2	BC104364|Clec5a|23845|C-type lectin domain family 5, member a	BC104365|Clec5a|23845|C-type lectin domain family 5, member a	AK036697|Clec5a|23845|C-type lectin domain family 5, member a	AF139769|Clec5a|23845|C-type lectin domain family 5, member a	AK046600|Clec5a|23845|C-type lectin domain family 5, member a	AK137482|Clec5a|23845|C-type lectin domain family 5, member a	NM_001038604|Clec5a|23845|C-type lectin domain family 5, member a	NM_021364|Clec5a|23845|C-type lectin domain family 5, member a	AK155409|Clec5a|23845|C-type lectin domain family 5, member a
mm9_v1_chr3_+_95039985_95040105	0.163809	RUNX1..3.p2	
mm9_v1_chr11_+_20531941_20532003	0.162775	RUNX1..3.p2	AK146621|Sertad2|58172|SERTA domain containing 2	NM_001038625|Sertad2|58172|SERTA domain containing 2	AK146897|Sertad2|58172|SERTA domain containing 2	AK132846|Sertad2|58172|SERTA domain containing 2	AK142018|Sertad2|58172|SERTA domain containing 2
mm9_v1_chr11_+_117222099_117222144	0.162621	RUNX1..3.p2	
mm9_v1_chr1_-_141273617_141273676	0.162616	RUNX1..3.p2	AF406641|Crb1|170788|crumbs homolog 1 (Drosophila)	AY450552|Crb1|170788|crumbs homolog 1 (Drosophila)	NM_133239|Crb1|170788|crumbs homolog 1 (Drosophila)	AF492496|Crb1|170788|crumbs homolog 1 (Drosophila)
mm9_v1_chr5_-_35441823_35441913	0.162581	RUNX1..3.p2	AK206813|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1
mm9_v1_chr2_-_166821559_166821808	0.162186	RUNX1..3.p2	AK151835|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK152744|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK152269|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK041781|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK159602|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	BC082277|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK167637|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK005002|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK030788|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK030890|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK160979|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK139532|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	BC012959|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK145826|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AK159781|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	NM_001109905|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	NM_001109906|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	NM_011490|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)	AF061942|Stau1|20853|staufen (RNA binding protein) homolog 1 (Drosophila)
mm9_v1_chr19_-_44628193_44628261	0.161921	RUNX1..3.p2	AK212374|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8
mm9_v1_chr3_+_53959956_53960294	0.160909	RUNX1..3.p2	AK084109|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK080670|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK084139|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	NM_016984|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	U50921|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	U50922|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	BC120729|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	BC131915|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK044265|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF190646|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF011543|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF019663|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK049788|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4
mm9_v1_chr5_-_31260302_31260437	0.160582	RUNX1..3.p2	AK202976|Preb|50907|prolactin regulatory element binding	AK179426|Preb|50907|prolactin regulatory element binding	AK197590|Preb|50907|prolactin regulatory element binding	AK206719|Preb|50907|prolactin regulatory element binding
mm9_v1_chr10_+_28863801_28863929	0.15966	RUNX1..3.p2	NM_026138|6330407J23Rik|67412|RIKEN cDNA 6330407J23 gene	AK030682|6330407J23Rik|67412|RIKEN cDNA 6330407J23 gene
mm9_v1_chr17_+_23953056_23953186	0.159411	RUNX1..3.p2	
mm9_v1_chr3_-_135271220_135271233	0.158981	RUNX1..3.p2	L28117|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chrX_+_103222548_103222685	0.158639	RUNX1..3.p2	AK017506|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK033254|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_001109757|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_009726|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK155643|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK171563|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK172209|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U03434|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U71091|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	BC141395|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr11_+_6375032_6375069	0.15862	RUNX1..3.p2	
mm9_v1_chr11_-_53113682_53113812	0.158373	RUNX1..3.p2	D85904|Hspa4|15525|heat shock protein 4
mm9_v1_chr13_+_78337168_78337277	0.157888	RUNX1..3.p2	AK082108|A830082K12Rik|320174|RIKEN cDNA A830082K12 gene
mm9_v1_chr2_+_103935948_103936036	0.15748	RUNX1..3.p2	NM_001111060|Cd59a|12509|CD59a antigen	NM_007652|Cd59a|12509|CD59a antigen	AK005507|Cd59a|12509|CD59a antigen	AK018136|Cd59a|12509|CD59a antigen	AK002743|Cd59a|12509|CD59a antigen	AK080728|Cd59a|12509|CD59a antigen	U60473|Cd59a|12509|CD59a antigen
mm9_v1_chrX_+_91612471_91612621	0.157412	RUNX1..3.p2	AK002320|Apoo|68316|apolipoprotein O	AK003831|Apoo|68316|apolipoprotein O	BC016557|Apoo|68316|apolipoprotein O	BC107208|Apoo|68316|apolipoprotein O	BC107209|Apoo|68316|apolipoprotein O
mm9_v1_chr10_+_126827366_126827366	0.156464	RUNX1..3.p2	NM_001168292|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr16_+_3744231_3744292	0.156332	RUNX1..3.p2	BC011505|Zfp263|74120|zinc finger protein 263	BC056222|Zfp263|74120|zinc finger protein 263
mm9_v1_chr10_-_80129720_80129733	0.156254	RUNX1..3.p2	BC013844|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr4_+_126430787_126430838	0.154932	RUNX1..3.p2	AK049570|AU040320|100317|expressed sequence AU040320	NM_001035525|AU040320|100317|expressed sequence AU040320	AK084668|AU040320|100317|expressed sequence AU040320	AK172674|AU040320|100317|expressed sequence AU040320
mm9_v1_chr4_-_43022972_43023183	0.154924	RUNX1..3.p2	AY049715|Fancg|60534|Fanconi anemia, complementation group G	BC139763|Fancg|60534|Fanconi anemia, complementation group G	AF112439|Fancg|60534|Fanconi anemia, complementation group G	BC141282|Fancg|60534|Fanconi anemia, complementation group G	AF406951|Fancg|60534|Fanconi anemia, complementation group G	NM_001163233|Fancg|60534|Fanconi anemia, complementation group G	NM_053081|Fancg|60534|Fanconi anemia, complementation group G
mm9_v1_chr13_+_113657736_113657889	0.154712	RUNX1..3.p2	
mm9_v1_chr5_+_90893032_90893045	0.154278	RUNX1..3.p2	M16111|Alb|11657|albumin
mm9_v1_chr8_-_41393270_41393282	0.15405	RUNX1..3.p2	AK005145|1500004F05Rik|69765|RIKEN cDNA 1500004F05 gene
mm9_v1_chr6_-_42595033_42595066	0.153891	RUNX1..3.p2	BC011487|Fam115c|232748|family with sequence similarity 115, member C	NM_146174|Fam115c|232748|family with sequence similarity 115, member C	BC008555|Fam115c|232748|family with sequence similarity 115, member C	AK084364|Fam115c|232748|family with sequence similarity 115, member C
mm9_v1_chr14_+_121325421_121325483	0.153792	RUNX1..3.p2	BC020012|Ipo5|70572|importin 5
mm9_v1_chr19_+_6298813_6298952	0.153457	RUNX1..3.p2	AK192505|Ehd1|13660|EH-domain containing 1	AK196160|Ehd1|13660|EH-domain containing 1	AK218303|Ehd1|13660|EH-domain containing 1	AK186304|Ehd1|13660|EH-domain containing 1	AK209033|Ehd1|13660|EH-domain containing 1
mm9_v1_chr10_-_39745065_39745113	0.15255	RUNX1..3.p2	AK089961|AI317395|215929|expressed sequence AI317395	NM_144821|AI317395|215929|expressed sequence AI317395
mm9_v1_chr13_-_54652983_54653158	0.152449	RUNX1..3.p2	AK216925|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK206564|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK215484|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK216083|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK218676|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene
mm9_v1_chr12_+_7984451_7984482	0.151745	RUNX1..3.p2	BC100607|Apob|238055|apolipoprotein B	BC028880|Apob|238055|apolipoprotein B	BC038263|Apob|238055|apolipoprotein B	NM_009693|Apob|238055|apolipoprotein B
mm9_v1_chrX_-_71470766_71470914	0.151704	RUNX1..3.p2	BC099506|Flna|192176|filamin, alpha
mm9_v1_chr13_+_54682957_54683061	0.151505	RUNX1..3.p2	AK090305|Arl10|56795|ADP-ribosylation factor-like 10
mm9_v1_chr5_-_20561610_20561764	0.150841	RUNX1..3.p2	X63440|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	BC051980|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	NM_011203|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	AK154107|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12
mm9_v1_chr14_-_58508974_58509153	0.150646	RUNX1..3.p2	AK020965|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AY668951|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK170139|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK031184|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK139216|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK140182|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK049270|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK163174|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK017158|Zdhhc20|75965|zinc finger, DHHC domain containing 20	NM_029492|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK151840|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK170017|Zdhhc20|75965|zinc finger, DHHC domain containing 20	BC019536|Zdhhc20|75965|zinc finger, DHHC domain containing 20
mm9_v1_chr13_-_55122556_55122626	0.150419	RUNX1..3.p2	AK149992|Hk3|212032|hexokinase 3	BC028480|Hk3|212032|hexokinase 3	AK149651|Hk3|212032|hexokinase 3	AK159857|Hk3|212032|hexokinase 3	AK170813|Hk3|212032|hexokinase 3	AK171248|Hk3|212032|hexokinase 3	AK140444|Hk3|212032|hexokinase 3	AK163658|Hk3|212032|hexokinase 3
mm9_v1_chr16_-_16869309_16869347	0.150178	RUNX1..3.p2	BC117051|Vpreb1|22362|pre-B lymphocyte gene 1	BC119175|Vpreb1|22362|pre-B lymphocyte gene 1	BC144850|Vpreb1|22362|pre-B lymphocyte gene 1	AK010843|Vpreb1|22362|pre-B lymphocyte gene 1	AK010879|Vpreb1|22362|pre-B lymphocyte gene 1	X05556|Vpreb1|22362|pre-B lymphocyte gene 1	NM_016982|Vpreb1|22362|pre-B lymphocyte gene 1
mm9_v1_chr6_-_52154325_52154433	0.149682	RUNX1..3.p2	AK144356|Hoxa5|15402|homeobox A5	AB221550|Hoxa5|15402|homeobox A5	BC011063|Hoxa5|15402|homeobox A5
mm9_v1_chr1_+_38108051_38108073	0.148284	RUNX1..3.p2	AK037432|Eif5b|226982|eukaryotic translation initiation factor 5B
mm9_v1_chrX_-_71211653_71211712	0.148063	RUNX1..3.p2	BC053742|Hcfc1|15161|host cell factor C1	NM_008224|Hcfc1|15161|host cell factor C1	AK140197|Hcfc1|15161|host cell factor C1	AK088827|Hcfc1|15161|host cell factor C1
mm9_v1_chr6_-_136824277_136824306	0.147284	RUNX1..3.p2	BC069922|Mgp|17313|matrix Gla protein	BC036991|Mgp|17313|matrix Gla protein	BC079478|Mgp|17313|matrix Gla protein
mm9_v1_chr2_-_150514717_150514872	0.147033	RUNX1..3.p2	AF391758|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AY056825|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AK044393|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AK044687|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC138456|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC138460|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AF395732|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC057647|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	NM_054068|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)
mm9_v1_chr14_-_14949338_14949426	0.14635	RUNX1..3.p2	AK217031|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
mm9_v1_chr4_-_33010429_33010479	0.146217	RUNX1..3.p2	BC065177|Ankrd6|140577|ankyrin repeat domain 6	NM_001012450|Ankrd6|140577|ankyrin repeat domain 6	NM_080471|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr3_+_14863507_14863565	0.145018	RUNX1..3.p2	AK003671|Car3|12350|carbonic anhydrase 3	AK075630|Car3|12350|carbonic anhydrase 3	AK002349|Car3|12350|carbonic anhydrase 3	AK017227|Car3|12350|carbonic anhydrase 3	BC011129|Car3|12350|carbonic anhydrase 3	NM_007606|Car3|12350|carbonic anhydrase 3
mm9_v1_chr3_-_30546739_30546790	0.144184	RUNX1..3.p2	BC100519|Lrrc34|71827|leucine rich repeat containing 34	NM_027941|Lrrc34|71827|leucine rich repeat containing 34	AK005720|Lrrc34|71827|leucine rich repeat containing 34
mm9_v1_chr7_+_148445746_148445836	0.144088	RUNX1..3.p2	AK164283|Phrf1|101471|PHD and ring finger domains 1
mm9_v1_chr11_+_87912709_87912809	0.143909	RUNX1..3.p2	BC025434|Cuedc1|103841|CUE domain containing 1	BC024476|Cuedc1|103841|CUE domain containing 1
mm9_v1_chr16_+_4940212_4940403	0.143899	RUNX1..3.p2	AK183937|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	AK193716|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
mm9_v1_chr13_+_100897826_100897856	0.143468	RUNX1..3.p2	AK208849|Smn1|20595|survival motor neuron 1	AK214738|Smn1|20595|survival motor neuron 1
mm9_v1_chr7_-_17501647_17501670	0.143429	RUNX1..3.p2	AK049104|Calm3|12315|calmodulin 3
mm9_v1_chr16_-_17530777_17530885	0.142696	RUNX1..3.p2	AK007329|Thap7|69009|THAP domain containing 7
mm9_v1_chr9_-_44613544_44613680	0.142428	RUNX1..3.p2	
mm9_v1_chr10_+_127528632_127528696	0.142353	RUNX1..3.p2	AK140355|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	AK155523|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	AK035400|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	BC020083|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A
mm9_v1_chr9_-_107522452_107522481	0.141244	RUNX1..3.p2	
mm9_v1_chr8_+_94192087_94192089	0.140076	RUNX1..3.p2	
mm9_v1_chr8_+_116167112_116167131	0.139874	RUNX1..3.p2	AY899935|Syce1l|668110|synaptonemal complex central element protein 1 like	AY899936|Syce1l|668110|synaptonemal complex central element protein 1 like	BC141326|Syce1l|668110|synaptonemal complex central element protein 1 like	BC141347|Syce1l|668110|synaptonemal complex central element protein 1 like	NM_001048145|Syce1l|668110|synaptonemal complex central element protein 1 like	NM_029139|Syce1l|668110|synaptonemal complex central element protein 1 like	AK015606|Syce1l|668110|synaptonemal complex central element protein 1 like	BC100478|Syce1l|668110|synaptonemal complex central element protein 1 like
mm9_v1_chr19_+_46379216_46379289	0.139472	RUNX1..3.p2	NM_001177369|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK144994|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK137680|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK148160|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AK150012|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	AF155372|Nfkb2|18034|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100
mm9_v1_chr2_-_27309917_27310008	0.139129	RUNX1..3.p2	AK208466|Brd3|67382|bromodomain containing 3	AK184568|Brd3|67382|bromodomain containing 3	AK190838|Brd3|67382|bromodomain containing 3	AK210005|Brd3|67382|bromodomain containing 3	AK218049|Brd3|67382|bromodomain containing 3	AK010739|Brd3|67382|bromodomain containing 3
mm9_v1_chr7_+_110477001_110477001	0.138941	RUNX1..3.p2	NM_001011793|Olfr598|257975|olfactory receptor 598
mm9_v1_chr10_+_80614066_80614217	0.138744	RUNX1..3.p2	AK018596|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr8_-_72440219_72440255	0.138743	RUNX1..3.p2	BC031407|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr9_-_26962964_26963002	0.138596	RUNX1..3.p2	AJ300304|Jam3|83964|junction adhesion molecule 3	AK003326|Jam3|83964|junction adhesion molecule 3	AK013156|Jam3|83964|junction adhesion molecule 3	AK032833|Jam3|83964|junction adhesion molecule 3	NM_023277|Jam3|83964|junction adhesion molecule 3	BC024357|Jam3|83964|junction adhesion molecule 3	AK008187|Jam3|83964|junction adhesion molecule 3	AK160648|Jam3|83964|junction adhesion molecule 3
mm9_v1_chr14_+_119337243_119337339	0.13849	RUNX1..3.p2	AK212342|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3
mm9_v1_chr7_-_13583494_13583549	0.137465	RUNX1..3.p2	BC013272|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC013335|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	AJ223959|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	AK144301|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	NM_009512|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5
mm9_v1_chr5_-_114292548_114292630	0.137447	RUNX1..3.p2	
mm9_v1_chrX_-_137908618_137908628	0.137341	RUNX1..3.p2	AB041351|Col4a6|94216|collagen, type IV, alpha 6	NM_053185|Col4a6|94216|collagen, type IV, alpha 6
mm9_v1_chr10_-_30375572_30375672	0.137107	RUNX1..3.p2	BC080742|Ncoa7|211329|nuclear receptor coactivator 7	AK033503|Ncoa7|211329|nuclear receptor coactivator 7	AK171679|Ncoa7|211329|nuclear receptor coactivator 7	BC058572|Ncoa7|211329|nuclear receptor coactivator 7	BC080670|Ncoa7|211329|nuclear receptor coactivator 7	BC049997|Ncoa7|211329|nuclear receptor coactivator 7	AK165098|Ncoa7|211329|nuclear receptor coactivator 7	AK042369|Ncoa7|211329|nuclear receptor coactivator 7	EF602028|Ncoa7|211329|nuclear receptor coactivator 7	NM_001111267|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr3_-_97020401_97020429	0.136904	RUNX1..3.p2	BC137850|Bcl9|77578|B-cell CLL/lymphoma 9	AY296061|Bcl9|77578|B-cell CLL/lymphoma 9	NM_029933|Bcl9|77578|B-cell CLL/lymphoma 9
mm9_v1_chr19_+_5568016_5568024	0.136682	RUNX1..3.p2	AK171710|Gm962|381201|predicted gene 962
mm9_v1_chr4_+_5726856_5726857	0.136182	RUNX1..3.p2	AK049898|Fam110b|242297|family with sequence similarity 110, member B
mm9_v1_chr12_-_74147698_74147707	0.135762	RUNX1..3.p2	AK131925|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	NM_009189|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	AK144753|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chr1_+_136456781_136456812	0.135626	RUNX1..3.p2	AK163481|Kdm5b|75605|lysine (K)-specific demethylase 5B	AK008738|Kdm5b|75605|lysine (K)-specific demethylase 5B
mm9_v1_chr7_+_50469408_50469408	0.134841	RUNX1..3.p2	EU599041|EU599041|100170401|expressed sequence EU599041	EU599042|EU599041|100170401|expressed sequence EU599041	NM_001177525|EU599041|100170401|expressed sequence EU599041
mm9_v1_chr17_-_71202829_71202871	0.133961	RUNX1..3.p2	AK160193|Tgif1|21815|TGFB-induced factor homeobox 1	NM_001164074|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr3_+_66023884_66023904	0.132353	RUNX1..3.p2	X83601|Ptx3|19288|pentraxin related gene
mm9_v1_chr7_-_56892061_56892218	0.131983	RUNX1..3.p2	BC082541|Dbx1|13172|developing brain homeobox 1	NM_001005232|Dbx1|13172|developing brain homeobox 1	S75837|Dbx1|13172|developing brain homeobox 1
mm9_v1_chr11_-_51457826_51457921	0.131639	RUNX1..3.p2	BC005767|N4bp3|212706|NEDD4 binding protein 3
mm9_v1_chr7_+_25155455_25155523	0.131431	RUNX1..3.p2	AB128930|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AF072884|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK085752|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr11_+_94189524_94189598	0.130901	RUNX1..3.p2	AK017451|Ankrd40|71452|ankyrin repeat domain 40	L10902|Ankrd40|71452|ankyrin repeat domain 40
mm9_v1_chr2_+_91050920_91051054	0.13076	RUNX1..3.p2	AK080581|Acp2|11432|acid phosphatase 2, lysosomal
mm9_v1_chr4_-_155033529_155033642	0.130669	RUNX1..3.p2	AK196409|Mib2|76580|mindbomb homolog 2 (Drosophila)	AK207505|Mib2|76580|mindbomb homolog 2 (Drosophila)	AK214642|Mib2|76580|mindbomb homolog 2 (Drosophila)
mm9_v1_chr10_-_79361719_79361739	0.130459	RUNX1..3.p2	
mm9_v1_chr11_+_78002569_78002838	0.130381	RUNX1..3.p2	BC038638|Rab34|19376|RAB34, member of RAS oncogene family	AB232630|Rab34|19376|RAB34, member of RAS oncogene family	AF322068|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chr1_+_173341811_173341858	0.130047	RUNX1..3.p2	NM_009480|Usf1|22278|upstream transcription factor 1
mm9_v1_chr11_+_69154265_69154342	0.130009	RUNX1..3.p2	AK002962|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	AK045471|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	AB041807|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene	BC021519|A030009H04Rik|80515|RIKEN cDNA A030009H04 gene
mm9_v1_chr9_-_66883879_66883923	0.129714	RUNX1..3.p2	AK215633|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chr17_+_29839370_29839515	0.129686	RUNX1..3.p2	
mm9_v1_chr5_+_21151760_21151873	0.129135	RUNX1..3.p2	BC058573|Armc10|67211|armadillo repeat containing 10	AK011303|Armc10|67211|armadillo repeat containing 10	NM_026034|Armc10|67211|armadillo repeat containing 10	AK009821|Armc10|67211|armadillo repeat containing 10	AK012872|Armc10|67211|armadillo repeat containing 10	BC046281|Armc10|67211|armadillo repeat containing 10	BC038487|Armc10|67211|armadillo repeat containing 10	BC027343|Armc10|67211|armadillo repeat containing 10
mm9_v1_chr2_+_59192308_59192366	0.12906	RUNX1..3.p2	AK021168|Pkp4|227937|plakophilin 4
mm9_v1_chr16_+_20128178_20128320	0.128226	RUNX1..3.p2	AK004187|Klhl24|75785|kelch-like 24 (Drosophila)
mm9_v1_chr5_+_81449776_81449780	0.127669	RUNX1..3.p2	AK155931|Lphn3|319387|latrophilin 3
mm9_v1_chr1_-_134539434_134539434	0.127431	RUNX1..3.p2	NM_001160316|Nfasc|269116|neurofascin
mm9_v1_chrX_+_96331434_96331470	0.127192	RUNX1..3.p2	AK034996|Efnb1|13641|ephrin B1	NM_010110|Efnb1|13641|ephrin B1
mm9_v1_chr5_-_39267928_39268050	0.126788	RUNX1..3.p2	BC125637|Clnk|27278|cytokine-dependent hematopoietic cell linker	BC125639|Clnk|27278|cytokine-dependent hematopoietic cell linker	AF187819|Clnk|27278|cytokine-dependent hematopoietic cell linker	NM_013748|Clnk|27278|cytokine-dependent hematopoietic cell linker	AB021220|Clnk|27278|cytokine-dependent hematopoietic cell linker
mm9_v1_chr10_-_68004607_68004622	0.12637	RUNX1..3.p2	BC087900|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene	AK006661|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene	AK029622|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene	NM_028491|1700040L02Rik|73287|RIKEN cDNA 1700040L02 gene
mm9_v1_chr8_+_108703001_108703015	0.126162	RUNX1..3.p2	BC038404|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
mm9_v1_chr4_+_126872429_126872476	0.126074	RUNX1..3.p2	BC058433|Dlgap3|242667|discs, large (Drosophila) homolog-associated protein 3
mm9_v1_chr11_+_97547236_97547285	0.126041	RUNX1..3.p2	NM_001085500|Cisd3|217149|CDGSH iron sulfur domain 3	BC056217|Cisd3|217149|CDGSH iron sulfur domain 3
mm9_v1_chr17_+_33692639_33692778	0.126001	RUNX1..3.p2	NM_053214|Myo1f|17916|myosin IF	BC046502|Myo1f|17916|myosin IF	AK153908|Myo1f|17916|myosin IF	X97650|Myo1f|17916|myosin IF	AK158333|Myo1f|17916|myosin IF
mm9_v1_chr2_+_37372112_37372145	0.125975	RUNX1..3.p2	AK141999|Gpr21|338346|G protein-coupled receptor 21	AK048682|Gpr21|338346|G protein-coupled receptor 21	AK139361|Gpr21|338346|G protein-coupled receptor 21	NM_177383|Gpr21|338346|G protein-coupled receptor 21
mm9_v1_chr3_-_88964022_88964062	0.125846	RUNX1..3.p2	BC039156|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3	BC138319|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3	BC138321|Hcn3|15168|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm9_v1_chr15_-_36538484_36538485	0.125841	RUNX1..3.p2	BC011207|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr1_-_164790079_164790095	0.125623	RUNX1..3.p2	AK042457|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr2_-_155555105_155555210	0.125254	RUNX1..3.p2	AK075650|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	BC008268|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK149892|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK040560|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK079296|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK166998|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK080636|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK029164|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK155024|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	NM_145537|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2
mm9_v1_chr1_-_175671849_175671956	0.125111	RUNX1..3.p2	BC150711|AI607873|226691|expressed sequence AI607873	AK054438|AI607873|226691|expressed sequence AI607873
mm9_v1_chr15_+_97942484_97942592	0.124184	RUNX1..3.p2	D21868|Pfkm|18642|phosphofructokinase, muscle	NM_021514|Pfkm|18642|phosphofructokinase, muscle	BC005526|Pfkm|18642|phosphofructokinase, muscle	AF249894|Pfkm|18642|phosphofructokinase, muscle	D21865|Pfkm|18642|phosphofructokinase, muscle
mm9_v1_chr1_-_154472199_154472354	0.124062	RUNX1..3.p2	BC017678|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	NM_016846|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	U14103|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	AK169109|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	AK169180|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	AK144218|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1
mm9_v1_chr8_+_75285778_75285801	0.123395	RUNX1..3.p2	AK036427|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	AK156729|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	NM_007975|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	BC119461|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	AK153720|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3	AF080215|F2rl3|14065|coagulation factor II (thrombin) receptor-like 3
mm9_v1_chr2_+_135883963_135884022	0.12336	RUNX1..3.p2	AK018222|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene	AK045946|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chrX_+_131252542_131252558	0.12299	RUNX1..3.p2	AK019405|Armcx1|78248|armadillo repeat containing, X-linked 1	BC021410|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr5_+_21151630_21151704	0.122468	RUNX1..3.p2	AK015272|Armc10|67211|armadillo repeat containing 10
mm9_v1_chr18_-_62708343_62708418	0.121854	RUNX1..3.p2	AK031096|Fbxo38|107035|F-box protein 38	BC056348|Fbxo38|107035|F-box protein 38	AK089046|Fbxo38|107035|F-box protein 38	NM_134136|Fbxo38|107035|F-box protein 38
mm9_v1_chr9_-_21820860_21820861	0.121709	RUNX1..3.p2	AK134781|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm9_v1_chr19_-_10630215_10630267	0.121664	RUNX1..3.p2	BC052053|Tmem216|68642|transmembrane protein 216	AK080725|Tmem216|68642|transmembrane protein 216	AK013286|Tmem216|68642|transmembrane protein 216
mm9_v1_chr14_+_21537761_21537875	0.121618	RUNX1..3.p2	BC027155|2310021P13Rik|268721|RIKEN cDNA 2310021P13 gene
mm9_v1_chr15_+_88582086_88582189	0.12146	RUNX1..3.p2	NM_181412|Zbed4|223773|zinc finger, BED domain containing 4	AK005794|Zbed4|223773|zinc finger, BED domain containing 4
mm9_v1_chr11_-_97521633_97521716	0.121306	RUNX1..3.p2	AK052674|LOC432596|432596|similar to Als2 protein
mm9_v1_chr18_-_34166572_34166697	0.120883	RUNX1..3.p2	BC007166|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	BC013557|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	AK161182|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a
mm9_v1_chr6_+_21935907_21936001	0.120801	RUNX1..3.p2	AK087585|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	NM_001081351|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	AK033229|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	AK040587|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene
mm9_v1_chr7_-_20281956_20282388	0.120604	RUNX1..3.p2	
mm9_v1_chr18_+_82753560_82753917	0.120097	RUNX1..3.p2	AK205832|Mbp|17196|myelin basic protein	AK195683|Mbp|17196|myelin basic protein	AK198099|Mbp|17196|myelin basic protein
mm9_v1_chr1_+_74314377_74314414	0.119952	RUNX1..3.p2	AK213157|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr11_-_70068839_70068854	0.119883	RUNX1..3.p2	AK036898|Alox12|11684|arachidonate 12-lipoxygenase	AK172216|Alox12|11684|arachidonate 12-lipoxygenase	AK079232|Alox12|11684|arachidonate 12-lipoxygenase	AK087724|Alox12|11684|arachidonate 12-lipoxygenase	AK172488|Alox12|11684|arachidonate 12-lipoxygenase	BC152329|Alox12|11684|arachidonate 12-lipoxygenase	BC152403|Alox12|11684|arachidonate 12-lipoxygenase	NM_007440|Alox12|11684|arachidonate 12-lipoxygenase	S80446|Alox12|11684|arachidonate 12-lipoxygenase
mm9_v1_chr17_-_24647423_24647477	0.119494	RUNX1..3.p2	AK198829|Traf7|224619|TNF receptor-associated factor 7	AK200776|Traf7|224619|TNF receptor-associated factor 7
mm9_v1_chr3_+_88125464_88125582	0.118898	RUNX1..3.p2	
mm9_v1_chr6_-_29559792_29559839	0.118884	RUNX1..3.p2	AK049446|Tnpo3|320938|transportin 3	BC075678|Tnpo3|320938|transportin 3
mm9_v1_chr1_-_128634766_128634787	0.11806	RUNX1..3.p2	AK083792|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr9_+_15309938_15309938	0.117786	RUNX1..3.p2	AF197136|BC017612|170748|cDNA sequence BC017612	NM_133214|BC017612|170748|cDNA sequence BC017612
mm9_v1_chr16_+_23058322_23058435	0.117415	RUNX1..3.p2	NM_001102411|Kng1|16644|kininogen 1	NM_001102412|Kng1|16644|kininogen 1	NM_023125|Kng1|16644|kininogen 1	AK005547|Kng1|16644|kininogen 1	BC108936|Kng1|16644|kininogen 1	BC018158|Kng1|16644|kininogen 1
mm9_v1_chr7_-_17501314_17501410	0.117109	RUNX1..3.p2	
mm9_v1_chr5_+_115994255_115994483	0.117067	RUNX1..3.p2	AF293883|Pxn|19303|paxillin	AK191714|Pxn|19303|paxillin	AK209978|Pxn|19303|paxillin
mm9_v1_chr1_-_94336403_94336417	0.11703	RUNX1..3.p2	AK184537|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
mm9_v1_chr11_-_11937330_11937512	0.116867	RUNX1..3.p2	AK030727|Grb10|14783|growth factor receptor bound protein 10	BC053842|Grb10|14783|growth factor receptor bound protein 10	AF022072|Grb10|14783|growth factor receptor bound protein 10	AK012646|Grb10|14783|growth factor receptor bound protein 10	AK163841|Grb10|14783|growth factor receptor bound protein 10	AK032927|Grb10|14783|growth factor receptor bound protein 10	NM_010345|Grb10|14783|growth factor receptor bound protein 10	FJ425892|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr10_-_116719183_116719359	0.116009	RUNX1..3.p2	BC002069|Lyz2|17105|lysozyme 2	BC054463|Lyz2|17105|lysozyme 2	AK159640|Lyz2|17105|lysozyme 2	AK148516|Lyz2|17105|lysozyme 2	AK150998|Lyz2|17105|lysozyme 2	AK153244|Lyz2|17105|lysozyme 2	AK153475|Lyz2|17105|lysozyme 2	NM_017372|Lyz2|17105|lysozyme 2
mm9_v1_chr7_-_107475377_107475426	0.115905	RUNX1..3.p2	
mm9_v1_chr7_+_80885223_80885308	0.115852	RUNX1..3.p2	BC034069|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr5_-_137462712_137462731	0.115757	RUNX1..3.p2	BC026751|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr4_-_137876711_137876741	0.115674	RUNX1..3.p2	AK213702|Pink1|68943|PTEN induced putative kinase 1
mm9_v1_chr1_+_154802091_154802137	0.114943	RUNX1..3.p2	AK084041|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	AK083532|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr1_+_166081951_166082088	0.114529	RUNX1..3.p2	AK137521|F5|14067|coagulation factor V	AK139240|F5|14067|coagulation factor V	AK137537|F5|14067|coagulation factor V	NM_007976|F5|14067|coagulation factor V	U52925|F5|14067|coagulation factor V
mm9_v1_chr3_-_88897207_88897284	0.114324	RUNX1..3.p2	AK039664|Rusc1|72296|RUN and SH3 domain containing 1	BC056360|Rusc1|72296|RUN and SH3 domain containing 1	AK042689|Rusc1|72296|RUN and SH3 domain containing 1	NM_001083807|Rusc1|72296|RUN and SH3 domain containing 1	NM_028188|Rusc1|72296|RUN and SH3 domain containing 1
mm9_v1_chr4_+_140528820_140528899	0.11427	RUNX1..3.p2	AF095936|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	AK190493|Sdhb|67680|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
mm9_v1_chr9_-_96379093_96379128	0.114096	RUNX1..3.p2	AK006703|Rnf7|19823|ring finger protein 7
mm9_v1_chr6_-_136824323_136824329	0.114095	RUNX1..3.p2	AK018719|Mgp|17313|matrix Gla protein	AK159591|Mgp|17313|matrix Gla protein	AK159931|Mgp|17313|matrix Gla protein	NM_008597|Mgp|17313|matrix Gla protein
mm9_v1_chr6_+_73221007_73221091	0.113798	RUNX1..3.p2	AK204482|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr1_+_43787692_43787692	0.113249	RUNX1..3.p2	AK018770|1500015O10Rik|78896|RIKEN cDNA 1500015O10 gene
mm9_v1_chr10_+_98478207_98478246	0.112897	RUNX1..3.p2	BC025199|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr6_+_17616617_17616660	0.112876	RUNX1..3.p2	AK004237|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr19_+_7049639_7049662	0.112345	RUNX1..3.p2	BC125654|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	BC125650|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm9_v1_chr19_-_4801605_4801652	0.112146	RUNX1..3.p2	
mm9_v1_chr11_-_102266342_102266375	0.112065	RUNX1..3.p2	AK211485|Slc25a39|68066|solute carrier family 25, member 39
mm9_v1_chr1_-_146096156_146096233	0.112004	RUNX1..3.p2	BC052684|Rgs1|50778|regulator of G-protein signaling 1	AF215667|Rgs1|50778|regulator of G-protein signaling 1	BC028634|Rgs1|50778|regulator of G-protein signaling 1	AK154841|Rgs1|50778|regulator of G-protein signaling 1	AK170366|Rgs1|50778|regulator of G-protein signaling 1	AK089293|Rgs1|50778|regulator of G-protein signaling 1	AK138688|Rgs1|50778|regulator of G-protein signaling 1	AK154394|Rgs1|50778|regulator of G-protein signaling 1	AK170957|Rgs1|50778|regulator of G-protein signaling 1	AK171306|Rgs1|50778|regulator of G-protein signaling 1	NM_015811|Rgs1|50778|regulator of G-protein signaling 1
mm9_v1_chr2_+_180921963_180922240	0.111725	RUNX1..3.p2	AK002602|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC058516|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK154758|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK166314|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC100439|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK003282|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	NM_025598|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012327|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012037|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK014211|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC029225|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC091753|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012545|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene
mm9_v1_chr17_-_45798447_45798582	0.110822	RUNX1..3.p2	AK208427|Tmem63b|224807|transmembrane protein 63b	AK217033|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr13_+_89680240_89680277	0.11071	RUNX1..3.p2	AK032750|Hapln1|12950|hyaluronan and proteoglycan link protein 1	NM_013500|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chrX_+_159339465_159339507	0.110577	RUNX1..3.p2	NM_001168568|Ctps2|55936|cytidine 5'-triphosphate synthase 2
mm9_v1_chr17_+_28829512_28829512	0.110421	RUNX1..3.p2	AK151348|Mapk14|26416|mitogen-activated protein kinase 14	AK153025|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168513|Mapk14|26416|mitogen-activated protein kinase 14
mm9_v1_chr8_-_108375786_108375962	0.110027	RUNX1..3.p2	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr5_-_115594042_115594212	0.10984	RUNX1..3.p2	BC005740|Mlec|109154|malectin	BC025208|Mlec|109154|malectin
mm9_v1_chr11_+_81859212_81859265	0.10982	RUNX1..3.p2	NM_013654|Ccl7|20306|chemokine (C-C motif) ligand 7	AK078827|Ccl7|20306|chemokine (C-C motif) ligand 7	BC061126|Ccl7|20306|chemokine (C-C motif) ligand 7	S71251|Ccl7|20306|chemokine (C-C motif) ligand 7	AF128193|Ccl7|20306|chemokine (C-C motif) ligand 7	AF128194|Ccl7|20306|chemokine (C-C motif) ligand 7	L04694|Ccl7|20306|chemokine (C-C motif) ligand 7	S50588|Ccl7|20306|chemokine (C-C motif) ligand 7	Z12297|Ccl7|20306|chemokine (C-C motif) ligand 7
mm9_v1_chr5_+_145016060_145016213	0.109723	RUNX1..3.p2	AK049027|Bri3|55950|brain protein I3	NM_018772|Bri3|55950|brain protein I3	AK080467|Bri3|55950|brain protein I3	BC005677|Bri3|55950|brain protein I3	BC095955|Bri3|55950|brain protein I3	BC021149|Bri3|55950|brain protein I3	AF106967|Bri3|55950|brain protein I3
mm9_v1_chr8_-_86097128_86097151	0.109692	RUNX1..3.p2	AK172506|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK171718|Tecr|106529|trans-2,3-enoyl-CoA reductase
mm9_v1_chr2_-_156754104_156754212	0.109579	RUNX1..3.p2	AK183588|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr8_-_75091078_75091201	0.109495	RUNX1..3.p2	
mm9_v1_chr12_-_82695968_82696003	0.109427	RUNX1..3.p2	AK005232|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK089101|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr7_+_88907871_88907915	0.109032	RUNX1..3.p2	AK150938|Fam103a1|67148|family with sequence similarity 103, member A1	BC091760|Fam103a1|67148|family with sequence similarity 103, member A1	AK010694|Fam103a1|67148|family with sequence similarity 103, member A1	BC096399|Fam103a1|67148|family with sequence similarity 103, member A1	BC058367|Fam103a1|67148|family with sequence similarity 103, member A1
mm9_v1_chr18_+_37839910_37840111	0.108951	RUNX1..3.p2	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr12_+_82047269_82047362	0.108916	RUNX1..3.p2	AK088358|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr11_+_102297838_102297879	0.108697	RUNX1..3.p2	
mm9_v1_chr5_+_145016734_145016797	0.108522	RUNX1..3.p2	X61454|Bri3|55950|brain protein I3
mm9_v1_chr16_+_16983772_16983783	0.108499	RUNX1..3.p2	AK216848|Mapk1|26413|mitogen-activated protein kinase 1	AK205643|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr8_+_108703203_108703313	0.108495	RUNX1..3.p2	
mm9_v1_chr6_+_115189004_115189072	0.108443	RUNX1..3.p2	AK029181|Syn2|20965|synapsin II
mm9_v1_chr5_-_109012019_109012139	0.108341	RUNX1..3.p2	BC003958|Gak|231580|cyclin G associated kinase
mm9_v1_chr11_+_100488707_100488855	0.108332	RUNX1..3.p2	AK201688|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2
mm9_v1_chrX_-_71469244_71469317	0.108143	RUNX1..3.p2	AF119149|Flna|192176|filamin, alpha
mm9_v1_chr5_+_89194037_89194113	0.107795	RUNX1..3.p2	NM_007832|Dck|13178|deoxycytidine kinase	BC060062|Dck|13178|deoxycytidine kinase	AK145353|Dck|13178|deoxycytidine kinase	AK145390|Dck|13178|deoxycytidine kinase	BC052004|Dck|13178|deoxycytidine kinase
mm9_v1_chr11_-_6100453_6100453	0.107668	RUNX1..3.p2	NM_173748|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr11_+_75578548_75578573	0.107376	RUNX1..3.p2	AK204716|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK199717|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr17_+_56850731_56850957	0.10737	RUNX1..3.p2	AK204937|Ranbp3|71810|RAN binding protein 3
mm9_v1_chr1_-_72747112_72747152	0.107211	RUNX1..3.p2	BC132415|Ankar|319695|ankyrin and armadillo repeat containing	BC145253|Ankar|319695|ankyrin and armadillo repeat containing	AK030065|Ankar|319695|ankyrin and armadillo repeat containing	NM_176980|Ankar|319695|ankyrin and armadillo repeat containing	AK077036|Ankar|319695|ankyrin and armadillo repeat containing
mm9_v1_chr8_+_123059756_123059756	0.107129	RUNX1..3.p2	AK033263|Gse1|382034|genetic suppressor element 1	NM_001145897|Gse1|382034|genetic suppressor element 1
mm9_v1_chr1_+_24184448_24184693	0.106792	RUNX1..3.p2	NM_007740|Col9a1|12839|collagen, type IX, alpha 1	AK031071|Col9a1|12839|collagen, type IX, alpha 1	D17511|Col9a1|12839|collagen, type IX, alpha 1	BC046970|Col9a1|12839|collagen, type IX, alpha 1	L12215|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr9_-_110892114_110892227	0.106266	RUNX1..3.p2	AY562227|Rtp3|235636|receptor transporter protein 3	BC150678|Rtp3|235636|receptor transporter protein 3	AJ428064|Rtp3|235636|receptor transporter protein 3	BC112903|Rtp3|235636|receptor transporter protein 3	NM_153100|Rtp3|235636|receptor transporter protein 3
mm9_v1_chr1_+_90108533_90108573	0.106012	RUNX1..3.p2	AY227194|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1	NM_201645|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1	L02333|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1	S64760|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1	BC093516|Ugt1a1|394436|UDP glucuronosyltransferase 1 family, polypeptide A1
mm9_v1_chr14_+_31371919_31371994	0.105999	RUNX1..3.p2	AF195533|Tkt|21881|transketolase	AK177246|Tkt|21881|transketolase	AK193096|Tkt|21881|transketolase	AK209594|Tkt|21881|transketolase
mm9_v1_chr7_-_13583329_13583480	0.105897	RUNX1..3.p2	AF072760|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC115421|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145823|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145825|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5
mm9_v1_chr2_-_66094647_66094696	0.105867	RUNX1..3.p2	BC151199|Ttc21b|73668|tetratricopeptide repeat domain 21B	BC172115|Ttc21b|73668|tetratricopeptide repeat domain 21B	DQ011164|Ttc21b|73668|tetratricopeptide repeat domain 21B	NM_001047604|Ttc21b|73668|tetratricopeptide repeat domain 21B
mm9_v1_chr11_-_40562329_40562432	0.105675	RUNX1..3.p2	
mm9_v1_chr1_+_53353919_53353984	0.105595	RUNX1..3.p2	NM_145517|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	AK050385|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	AK052927|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	AK077562|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	BC023695|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	BC025572|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	BC012315|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)
mm9_v1_chr4_-_128483355_128483429	0.105547	RUNX1..3.p2	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr10_-_80753957_80754016	0.105383	RUNX1..3.p2	AK029083|Tjp3|27375|tight junction protein 3	BC012518|Tjp3|27375|tight junction protein 3	AF157006|Tjp3|27375|tight junction protein 3	AK134100|Tjp3|27375|tight junction protein 3	NM_013769|Tjp3|27375|tight junction protein 3
mm9_v1_chr7_-_149561853_149562071	0.105061	RUNX1..3.p2	AK177774|Ctsd|13033|cathepsin D
mm9_v1_chr13_-_64376186_64376295	0.104969	RUNX1..3.p2	BC057357|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	BC049794|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	AK161345|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_172587|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
mm9_v1_chr15_-_78403110_78403220	0.10468	RUNX1..3.p2	X53247|Rac2|19354|RAS-related C3 botulinum substrate 2	BC005455|Rac2|19354|RAS-related C3 botulinum substrate 2	AK007561|Rac2|19354|RAS-related C3 botulinum substrate 2	AK088805|Rac2|19354|RAS-related C3 botulinum substrate 2	AK144136|Rac2|19354|RAS-related C3 botulinum substrate 2	AK088415|Rac2|19354|RAS-related C3 botulinum substrate 2	AK011045|Rac2|19354|RAS-related C3 botulinum substrate 2	AK171321|Rac2|19354|RAS-related C3 botulinum substrate 2	NM_009008|Rac2|19354|RAS-related C3 botulinum substrate 2
mm9_v1_chr17_+_47736273_47736367	0.104584	RUNX1..3.p2	AK191156|Ccnd3|12445|cyclin D3	AK196525|Ccnd3|12445|cyclin D3	AK196937|Ccnd3|12445|cyclin D3	AK201151|Ccnd3|12445|cyclin D3	AK208250|Ccnd3|12445|cyclin D3	AK209470|Ccnd3|12445|cyclin D3
mm9_v1_chr9_-_117160916_117161040	0.104413	RUNX1..3.p2	BC117840|Rbms3|207181|RNA binding motif, single stranded interacting protein	BC117841|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr18_-_60872888_60873042	0.104285	RUNX1..3.p2	AF049894|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AF074926|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC066098|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC079561|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	NM_008306|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr16_+_17018484_17018507	0.104239	RUNX1..3.p2	AK193161|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr15_+_97800138_97800260	0.103912	RUNX1..3.p2	
mm9_v1_chr11_+_81849074_81849163	0.10367	RUNX1..3.p2	AK150937|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153468|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153520|Ccl2|20296|chemokine (C-C motif) ligand 2	NM_011333|Ccl2|20296|chemokine (C-C motif) ligand 2	AK132590|Ccl2|20296|chemokine (C-C motif) ligand 2	AK151789|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153443|Ccl2|20296|chemokine (C-C motif) ligand 2	BC055070|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145867|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145869|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065929|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065930|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065931|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065932|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065933|Ccl2|20296|chemokine (C-C motif) ligand 2	CT010187|Ccl2|20296|chemokine (C-C motif) ligand 2
mm9_v1_chr2_-_127033968_127034003	0.103114	RUNX1..3.p2	BC117065|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene	BC119086|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene	AK019023|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene	AK029416|1810024B03Rik|329509|RIKEN cDNA 1810024B03 gene
mm9_v1_chr1_+_58859345_58859473	0.102863	RUNX1..3.p2	NM_001080126|Casp8|12370|caspase 8	AK153340|Casp8|12370|caspase 8
mm9_v1_chr13_+_59686602_59686637	0.102629	RUNX1..3.p2	AK021042|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm9_v1_chr7_+_148043741_148043765	0.102375	RUNX1..3.p2	AK212668|Ric8|101489|resistance to inhibitors of cholinesterase 8 homolog (C. elegans)
mm9_v1_chr1_+_9538119_9538173	0.102325	RUNX1..3.p2	NM_175236|Adhfe1|76187|alcohol dehydrogenase, iron containing, 1	AK018241|Adhfe1|76187|alcohol dehydrogenase, iron containing, 1	AK038853|Adhfe1|76187|alcohol dehydrogenase, iron containing, 1	AK050178|Adhfe1|76187|alcohol dehydrogenase, iron containing, 1	BC026584|Adhfe1|76187|alcohol dehydrogenase, iron containing, 1
mm9_v1_chr11_-_22185840_22185840	0.102267	RUNX1..3.p2	AF424697|Ehbp1|216565|EH domain binding protein 1	NM_153078|Ehbp1|216565|EH domain binding protein 1
mm9_v1_chr18_+_37968450_37968553	0.101847	RUNX1..3.p2	AK193109|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr8_-_95655156_95655184	0.101784	RUNX1..3.p2	AF034435|Ces1c|13884|carboxylesterase 1C	BC028907|Ces1c|13884|carboxylesterase 1C	M57960|Ces1c|13884|carboxylesterase 1C	AK050444|Ces1c|13884|carboxylesterase 1C	NM_007954|Ces1c|13884|carboxylesterase 1C
mm9_v1_chr6_-_38077491_38077509	0.101691	RUNX1..3.p2	BC059853|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene	BC042666|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene
mm9_v1_chr1_-_94044969_94044969	0.101655	RUNX1..3.p2	BC066052|Hdac4|208727|histone deacetylase 4	NM_207225|Hdac4|208727|histone deacetylase 4
mm9_v1_chr7_-_108080671_108080707	0.101499	RUNX1..3.p2	NM_001081116|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr2_+_94246863_94246944	0.101467	RUNX1..3.p2	AK012638|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene	AK016411|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene	AK148028|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene	AK141492|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene
mm9_v1_chr2_+_173603706_173603746	0.101045	RUNX1..3.p2	BC024562|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK205322|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK182293|Vapb|56491|vesicle-associated membrane protein, associated protein B and C
mm9_v1_chr5_-_38215607_38215829	0.10091	RUNX1..3.p2	AF308572|Msx1|17701|homeobox, msh-like 1	X14759|Msx1|17701|homeobox, msh-like 1	X59251|Msx1|17701|homeobox, msh-like 1	BC016426|Msx1|17701|homeobox, msh-like 1	AK077524|Msx1|17701|homeobox, msh-like 1	AK145726|Msx1|17701|homeobox, msh-like 1	AK078600|Msx1|17701|homeobox, msh-like 1	NM_010835|Msx1|17701|homeobox, msh-like 1
mm9_v1_chrX_-_69901382_69901584	0.100468	RUNX1..3.p2	BC119317|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	BC120686|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	M86568|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK134760|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	AK039144|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	NM_008067|Gabra3|14396|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3
mm9_v1_chr19_+_5647822_5648036	0.100233	RUNX1..3.p2	AK202240|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK203832|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr1_-_36758359_36758624	0.100217	RUNX1..3.p2	AK178242|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)	AK179202|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)	AK202455|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)	BC024861|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)	AK205839|Actr1b|226977|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
mm9_v1_chr10_+_128390564_128390580	0.100143	RUNX1..3.p2	L16544|Itga7|16404|integrin alpha 7
mm9_v1_chr1_-_20793592_20793721	0.100126	RUNX1..3.p2	AK219838|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)
mm9_v1_chr8_-_96496001_96496082	0.0994832	RUNX1..3.p2	AK197102|Amfr|23802|autocrine motility factor receptor
mm9_v1_chr10_+_127799210_127799343	0.0992546	RUNX1..3.p2	AK004297|Cs|12974|citrate synthase
mm9_v1_chr15_-_83207509_83207618	0.0991663	RUNX1..3.p2	
mm9_v1_chr17_-_12962478_12962617	0.0991188	RUNX1..3.p2	BC150817|Igf2r|16004|insulin-like growth factor 2 receptor	BC171973|Igf2r|16004|insulin-like growth factor 2 receptor	U04710|Igf2r|16004|insulin-like growth factor 2 receptor	NM_010515|Igf2r|16004|insulin-like growth factor 2 receptor
mm9_v1_chr2_+_13495963_13495974	0.0990007	RUNX1..3.p2	X51438|Vim|22352|vimentin	X56397|Vim|22352|vimentin
mm9_v1_chr7_+_27620354_27620362	0.0989538	RUNX1..3.p2	AK149439|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	NM_007812|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	AK132617|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC138796|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC138798|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5
mm9_v1_chr17_-_46817800_46817900	0.0988426	RUNX1..3.p2	BC018154|Klhdc3|71765|kelch domain containing 3	AK004964|Klhdc3|71765|kelch domain containing 3	AK141673|Klhdc3|71765|kelch domain containing 3	NM_001163729|Klhdc3|71765|kelch domain containing 3	NM_027910|Klhdc3|71765|kelch domain containing 3
mm9_v1_chr7_+_25155279_25155362	0.0986707	RUNX1..3.p2	AK010943|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_001163510|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_008433|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK155910|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	BC010274|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr2_+_145685882_145685886	0.0983561	RUNX1..3.p2	AK163047|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr15_+_75799711_75799736	0.0982884	RUNX1..3.p2	AK005330|Zfp707|69020|zinc finger protein 707	AK153958|Zfp707|69020|zinc finger protein 707
mm9_v1_chr11_-_90250949_90250992	0.0982067	RUNX1..3.p2	AK079308|Hlf|217082|hepatic leukemia factor	AK079068|Hlf|217082|hepatic leukemia factor
mm9_v1_chr14_+_31699648_31699721	0.0981156	RUNX1..3.p2	NM_001159299|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	NM_018746|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK004862|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK004893|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK050016|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK050270|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AF023919|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC016500|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC021459|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC092258|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC094457|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4
mm9_v1_chr17_+_26793311_26793343	0.0980056	RUNX1..3.p2	
mm9_v1_chr8_+_24145593_24145599	0.0978151	RUNX1..3.p2	M84756|Ank1|11733|ankyrin 1, erythroid	BC079910|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr2_+_172847371_172847458	0.0973674	RUNX1..3.p2	AK166609|Rbm38|56190|RNA binding motif protein 38	NM_019547|Rbm38|56190|RNA binding motif protein 38	BC006687|Rbm38|56190|RNA binding motif protein 38	AK162141|Rbm38|56190|RNA binding motif protein 38	AK146026|Rbm38|56190|RNA binding motif protein 38	AK172625|Rbm38|56190|RNA binding motif protein 38	BC085307|Rbm38|56190|RNA binding motif protein 38
mm9_v1_chr10_+_87323855_87324094	0.0972226	RUNX1..3.p2	NM_001111274|Igf1|16000|insulin-like growth factor 1	NM_001111276|Igf1|16000|insulin-like growth factor 1	NM_184052|Igf1|16000|insulin-like growth factor 1	X04480|Igf1|16000|insulin-like growth factor 1	X04482|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr19_-_28838026_28838038	0.0971931	RUNX1..3.p2	NM_001177391|Gm6788|627788|predicted gene 6788
mm9_v1_chr2_+_32251409_32251409	0.096943	RUNX1..3.p2	NM_133783|Ptges2|96979|prostaglandin E synthase 2
mm9_v1_chr10_+_80643547_80643880	0.0967481	RUNX1..3.p2	BC002233|Eef2|13629|eukaryotic translation elongation factor 2	M76131|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr10_+_127261285_127261339	0.0966463	RUNX1..3.p2	AY053573|Rdh18-ps|380674|retinol dehydrogenase 18, pseudogene
mm9_v1_chr15_-_78299035_78299081	0.0966121	RUNX1..3.p2	BC057674|Tmprss6|71753|transmembrane serine protease 6	AY240929|Tmprss6|71753|transmembrane serine protease 6	BC029645|Tmprss6|71753|transmembrane serine protease 6	NM_027902|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr5_-_104450785_104450834	0.0963783	RUNX1..3.p2	AF304306|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	BC038340|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	NM_053262|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK154803|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155174|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK158327|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK170939|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AY053570|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155202|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155327|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr4_-_63681749_63681759	0.0963613	RUNX1..3.p2	BC117979|Tnc|21923|tenascin C	BC117980|Tnc|21923|tenascin C	NM_011607|Tnc|21923|tenascin C	X56304|Tnc|21923|tenascin C
mm9_v1_chr15_+_73582208_73582380	0.0963358	RUNX1..3.p2	BC027445|Ptp4a3|19245|protein tyrosine phosphatase 4a3	CT010215|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK003954|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr15_-_5058532_5058532	0.095713	RUNX1..3.p2	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr6_+_87680862_87680866	0.0952966	RUNX1..3.p2	AB041550|Ccdc48|58229|coiled-coil domain containing 48	NM_001159697|Ccdc48|58229|coiled-coil domain containing 48	BC139438|Ccdc48|58229|coiled-coil domain containing 48	BC139439|Ccdc48|58229|coiled-coil domain containing 48
mm9_v1_chr7_+_31092787_31092817	0.0947371	RUNX1..3.p2	BC058124|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr8_+_108939247_108939300	0.0946034	RUNX1..3.p2	BC046230|Zfp90|22751|zinc finger protein 90	AK147423|Zfp90|22751|zinc finger protein 90	BC046298|Zfp90|22751|zinc finger protein 90	AK050519|Zfp90|22751|zinc finger protein 90	X79828|Zfp90|22751|zinc finger protein 90
mm9_v1_chr11_-_104303565_104303604	0.0944532	RUNX1..3.p2	AK153679|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	AK122484|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	NM_001081045|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene
mm9_v1_chr11_-_60717472_60717561	0.094441	RUNX1..3.p2	
mm9_v1_chr7_+_96552871_96552906	0.0944025	RUNX1..3.p2	BC015256|Fzd4|14366|frizzled homolog 4 (Drosophila)	NM_008055|Fzd4|14366|frizzled homolog 4 (Drosophila)	AK044794|Fzd4|14366|frizzled homolog 4 (Drosophila)	AK132577|Fzd4|14366|frizzled homolog 4 (Drosophila)	AK050891|Fzd4|14366|frizzled homolog 4 (Drosophila)
mm9_v1_chr4_+_48552806_48552952	0.0941005	RUNX1..3.p2	AK075956|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145925|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK017795|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK011381|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145924|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene
mm9_v1_chr11_+_98308147_98308152	0.0939687	RUNX1..3.p2	NM_010346|Grb7|14786|growth factor receptor bound protein 7	AK057640|Grb7|14786|growth factor receptor bound protein 7
mm9_v1_chr10_+_81106380_81106406	0.093558	RUNX1..3.p2	AK017778|Ankrd24|70615|ankyrin repeat domain 24
mm9_v1_chr3_+_135101314_135101542	0.0935524	RUNX1..3.p2	AK151295|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153100|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK077666|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153423|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159125|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr9_-_113563906_113564041	0.0934646	RUNX1..3.p2	AK199870|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr1_-_170361985_170362027	0.0933697	RUNX1..3.p2	AF020196|Pbx1|18514|pre B-cell leukemia transcription factor 1	BC058390|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr6_-_128312829_128312952	0.0931607	RUNX1..3.p2	AK156717|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	BC027368|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK146167|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK168313|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene
mm9_v1_chr9_-_107240625_107240680	0.0930106	RUNX1..3.p2	BC011431|Hemk1|69536|HemK methyltransferase family member 1	AK054445|Hemk1|69536|HemK methyltransferase family member 1	AK088071|Hemk1|69536|HemK methyltransferase family member 1	NM_133984|Hemk1|69536|HemK methyltransferase family member 1
mm9_v1_chr10_-_80131318_80131466	0.0929634	RUNX1..3.p2	AK164278|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK207448|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK008277|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr9_+_110034489_110034583	0.0929597	RUNX1..3.p2	NM_009211|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK143485|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK144122|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK133922|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U85614|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK144631|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK145352|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK042194|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC056375|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC052423|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC053064|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC022173|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm9_v1_chrX_+_54043764_54043779	0.0925623	RUNX1..3.p2	BC055725|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr7_+_4697401_4697488	0.092359	RUNX1..3.p2	
mm9_v1_chr9_-_108354707_108354736	0.0921876	RUNX1..3.p2	BC048918|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chr8_+_26629214_26629332	0.092015	RUNX1..3.p2	NM_001079908|Fgfr1|14182|fibroblast growth factor receptor 1	NM_001079909|Fgfr1|14182|fibroblast growth factor receptor 1	NM_010206|Fgfr1|14182|fibroblast growth factor receptor 1	AK049704|Fgfr1|14182|fibroblast growth factor receptor 1	S74765|Fgfr1|14182|fibroblast growth factor receptor 1	BC010200|Fgfr1|14182|fibroblast growth factor receptor 1
mm9_v1_chr14_+_66915914_66915996	0.0919115	RUNX1..3.p2	AK129288|Trim35|66854|tripartite motif-containing 35	AK163749|Trim35|66854|tripartite motif-containing 35	AB060155|Trim35|66854|tripartite motif-containing 35	AK179232|Trim35|66854|tripartite motif-containing 35	BC053494|Trim35|66854|tripartite motif-containing 35
mm9_v1_chr2_-_53937785_53937964	0.0912984	RUNX1..3.p2	BC030065|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	AK014769|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	AB043586|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	AK010465|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate	NM_023396|Rprm|67874|reprimo, TP53 dependent G2 arrest mediator candidate
mm9_v1_chr9_+_55889639_55889686	0.0911754	RUNX1..3.p2	AK041996|Rcn2|26611|reticulocalbin 2	NM_011992|Rcn2|26611|reticulocalbin 2	AF049125|Rcn2|26611|reticulocalbin 2	AK077486|Rcn2|26611|reticulocalbin 2	AK077734|Rcn2|26611|reticulocalbin 2	AK079156|Rcn2|26611|reticulocalbin 2	AK169765|Rcn2|26611|reticulocalbin 2	AK078106|Rcn2|26611|reticulocalbin 2	BC132320|Rcn2|26611|reticulocalbin 2	BC145668|Rcn2|26611|reticulocalbin 2
mm9_v1_chr7_-_89079168_89079313	0.0907575	RUNX1..3.p2	AK014849|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK044858|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK051401|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	AK135495|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr2_-_155127037_155127091	0.0907355	RUNX1..3.p2	BC013076|Pigu|228812|phosphatidylinositol glycan anchor biosynthesis, class U
mm9_v1_chrX_-_91077290_91077385	0.090676	RUNX1..3.p2	CT010338|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3
mm9_v1_chr12_+_16817741_16817769	0.0906245	RUNX1..3.p2	AK149061|E2f6|50496|E2F transcription factor 6
mm9_v1_chr11_-_11790403_11790410	0.0900258	RUNX1..3.p2	AK011834|Ddc|13195|dopa decarboxylase	AK149141|Ddc|13195|dopa decarboxylase	AK160769|Ddc|13195|dopa decarboxylase	NM_016672|Ddc|13195|dopa decarboxylase
mm9_v1_chr19_+_46139268_46139363	0.0899513	RUNX1..3.p2	
mm9_v1_chr13_-_74199688_74199784	0.0899451	RUNX1..3.p2	BC080681|Cep72|74470|centrosomal protein 72	BC060686|Cep72|74470|centrosomal protein 72	AK017134|Cep72|74470|centrosomal protein 72	AK034892|Cep72|74470|centrosomal protein 72	NM_028959|Cep72|74470|centrosomal protein 72
mm9_v1_chr7_+_13615892_13615926	0.089916	RUNX1..3.p2	AK193916|Trim28|21849|tripartite motif-containing 28	AK194102|Trim28|21849|tripartite motif-containing 28	AK190398|Trim28|21849|tripartite motif-containing 28	AK177374|Trim28|21849|tripartite motif-containing 28	AK189444|Trim28|21849|tripartite motif-containing 28	AK190056|Trim28|21849|tripartite motif-containing 28	AK190280|Trim28|21849|tripartite motif-containing 28	AK192048|Trim28|21849|tripartite motif-containing 28	AK196455|Trim28|21849|tripartite motif-containing 28	AK196856|Trim28|21849|tripartite motif-containing 28
mm9_v1_chr11_+_86497484_86497540	0.0892746	RUNX1..3.p2	NM_175004|Ptrh2|217057|peptidyl-tRNA hydrolase 2	AK028555|Ptrh2|217057|peptidyl-tRNA hydrolase 2	AK038888|Ptrh2|217057|peptidyl-tRNA hydrolase 2
mm9_v1_chr4_-_142889312_142889356	0.0892015	RUNX1..3.p2	M73748|Pdpn|14726|podoplanin	BC026551|Pdpn|14726|podoplanin
mm9_v1_chr10_-_126725826_126725958	0.0891729	RUNX1..3.p2	BC059015|Mbd6|110962|methyl-CpG binding domain protein 6	NM_033072|Mbd6|110962|methyl-CpG binding domain protein 6	AK158797|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr6_+_97160736_97160744	0.0890733	RUNX1..3.p2	D87211|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chr16_+_7069927_7069947	0.0890529	RUNX1..3.p2	AF191501|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_183188|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr17_-_84246073_84246129	0.0887707	RUNX1..3.p2	AK002608|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase	BC012872|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase	BC094021|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase	NM_025325|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase
mm9_v1_chr8_+_73054891_73055139	0.0886281	RUNX1..3.p2	AK177460|Fkbp8|14232|FK506 binding protein 8	AK184741|Fkbp8|14232|FK506 binding protein 8	AK182349|Fkbp8|14232|FK506 binding protein 8	AK197324|Fkbp8|14232|FK506 binding protein 8	AK209719|Fkbp8|14232|FK506 binding protein 8	AK212094|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr18_+_61747381_61747495	0.0885274	RUNX1..3.p2	AK217508|Csnk1a1|93687|casein kinase 1, alpha 1	AK218260|Csnk1a1|93687|casein kinase 1, alpha 1	AK211333|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr17_+_35404109_35404141	0.0885088	RUNX1..3.p2	
mm9_v1_chr9_+_21639937_21640039	0.0883957	RUNX1..3.p2	NM_001080940|Gm6484|624219|predicted gene 6484	BC051501|Gm6484|624219|predicted gene 6484	BC024408|Gm6484|624219|predicted gene 6484	BC038127|Gm6484|624219|predicted gene 6484
mm9_v1_chr8_+_89240252_89240401	0.0883623	RUNX1..3.p2	AK197630|Lonp2|66887|lon peptidase 2, peroxisomal
mm9_v1_chr12_+_91570569_91570694	0.0878959	RUNX1..3.p2	AJ006804|Nrxn3|18191|neurexin III
mm9_v1_chr5_-_122267654_122267839	0.0878025	RUNX1..3.p2	AK210164|Sh2b3|16923|SH2B adaptor protein 3	AK212257|Sh2b3|16923|SH2B adaptor protein 3
mm9_v1_chr1_+_87804349_87804399	0.0877201	RUNX1..3.p2	AK206485|Itm2c|64294|integral membrane protein 2C	AK207473|Itm2c|64294|integral membrane protein 2C	AK218160|Itm2c|64294|integral membrane protein 2C
mm9_v1_chr13_+_37917906_37917945	0.0871911	RUNX1..3.p2	NM_026830|Rreb1|68750|ras responsive element binding protein 1	AK154980|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chrX_-_99700697_99700735	0.0871759	RUNX1..3.p2	AK131998|Hdac8|70315|histone deacetylase 8
mm9_v1_chr6_+_110595586_110595619	0.0869728	RUNX1..3.p2	BC080315|Grm7|108073|glutamate receptor, metabotropic 7	NM_177328|Grm7|108073|glutamate receptor, metabotropic 7
mm9_v1_chr11_+_64814537_64814673	0.0868735	RUNX1..3.p2	
mm9_v1_chr14_-_32249046_32249246	0.0868113	RUNX1..3.p2	AB016835|Sh3bp5|24056|SH3-domain binding protein 5 (BTK-associated)	BC053741|Sh3bp5|24056|SH3-domain binding protein 5 (BTK-associated)	NM_011894|Sh3bp5|24056|SH3-domain binding protein 5 (BTK-associated)
mm9_v1_chr7_-_35005925_35005938	0.086559	RUNX1..3.p2	AK194043|Gpi1|14751|glucose phosphate isomerase 1	AK196108|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr7_+_87391261_87391440	0.0865523	RUNX1..3.p2	AK029565|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	NM_177765|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK007167|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK161519|Ttll13|269954|tubulin tyrosine ligase-like family, member 13
mm9_v1_chr13_+_100877966_100878073	0.0865065	RUNX1..3.p2	NM_011353|Serf1|20365|small EDRK-rich factor 1	AF073517|Serf1|20365|small EDRK-rich factor 1	BC028510|Serf1|20365|small EDRK-rich factor 1	AK012379|Serf1|20365|small EDRK-rich factor 1	AK005773|Serf1|20365|small EDRK-rich factor 1
mm9_v1_chr6_-_72908352_72908476	0.0863629	RUNX1..3.p2	BC089326|Tmsb10|19240|thymosin, beta 10	BC145877|Tmsb10|19240|thymosin, beta 10	BC145879|Tmsb10|19240|thymosin, beta 10	BC094284|Tmsb10|19240|thymosin, beta 10	BC070416|Tmsb10|19240|thymosin, beta 10	BC048070|Tmsb10|19240|thymosin, beta 10	BC037153|Tmsb10|19240|thymosin, beta 10	BC080312|Tmsb10|19240|thymosin, beta 10	BC099374|Tmsb10|19240|thymosin, beta 10	BC093587|Tmsb10|19240|thymosin, beta 10	BC059777|Tmsb10|19240|thymosin, beta 10	BC092009|Tmsb10|19240|thymosin, beta 10	BC038926|Tmsb10|19240|thymosin, beta 10	AK019232|Tmsb10|19240|thymosin, beta 10	AK003178|Tmsb10|19240|thymosin, beta 10	AK005512|Tmsb10|19240|thymosin, beta 10	AK008557|Tmsb10|19240|thymosin, beta 10	AK012361|Tmsb10|19240|thymosin, beta 10	AK019212|Tmsb10|19240|thymosin, beta 10	AK131711|Tmsb10|19240|thymosin, beta 10	AK161987|Tmsb10|19240|thymosin, beta 10	NM_025284|Tmsb10|19240|thymosin, beta 10
mm9_v1_chr7_-_20282950_20283001	0.0862139	RUNX1..3.p2	M73490|Apoe|11816|apolipoprotein E
mm9_v1_chr15_-_101632762_101632762	0.0861164	RUNX1..3.p2	BC067067|Krt73|223915|keratin 73	NM_212485|Krt73|223915|keratin 73
mm9_v1_chr4_+_45903174_45903208	0.0857881	RUNX1..3.p2	NM_198660|E230008N13Rik|381522|RIKEN cDNA E230008N13 gene
mm9_v1_chr5_+_121075796_121075933	0.0855803	RUNX1..3.p2	
mm9_v1_chr12_+_25336138_25336389	0.0855215	RUNX1..3.p2	AK038397|Klf11|194655|Kruppel-like factor 11	AK050156|Klf11|194655|Kruppel-like factor 11	NM_178357|Klf11|194655|Kruppel-like factor 11	BC060642|Klf11|194655|Kruppel-like factor 11	AK161233|Klf11|194655|Kruppel-like factor 11	AK082838|Klf11|194655|Kruppel-like factor 11	AK036618|Klf11|194655|Kruppel-like factor 11	AK089044|Klf11|194655|Kruppel-like factor 11	AK084913|Klf11|194655|Kruppel-like factor 11	AK085319|Klf11|194655|Kruppel-like factor 11	AK054170|Klf11|194655|Kruppel-like factor 11	AJ459773|Klf11|194655|Kruppel-like factor 11
mm9_v1_chrX_-_137908516_137908603	0.0853735	RUNX1..3.p2	BC057648|Col4a6|94216|collagen, type IV, alpha 6	AK165178|Col4a6|94216|collagen, type IV, alpha 6
mm9_v1_chr6_+_149257918_149258112	0.0851293	RUNX1..3.p2	NM_026054|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK013408|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK017376|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK220403|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK031989|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK031797|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	BC139435|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	BC139436|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK031526|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK079405|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene
mm9_v1_chr12_-_102137614_102137733	0.0843116	RUNX1..3.p2	AK154292|Gm10431|100038679|predicted gene 10431	NM_001177674|Gpr68|238377|G protein-coupled receptor 68
mm9_v1_chr19_-_7180162_7180222	0.0841455	RUNX1..3.p2	AY495668|Flrt1|396184|fibronectin leucine rich transmembrane protein 1	AK031503|Flrt1|396184|fibronectin leucine rich transmembrane protein 1	NM_201411|Flrt1|396184|fibronectin leucine rich transmembrane protein 1	BC070403|Flrt1|396184|fibronectin leucine rich transmembrane protein 1
mm9_v1_chr3_+_30501008_30501008	0.0840992	RUNX1..3.p2	BC065084|Mynn|80732|myoneurin	NM_030557|Mynn|80732|myoneurin
mm9_v1_chr6_+_88051917_88051985	0.0836721	RUNX1..3.p2	AK216914|Rpn1|103963|ribophorin I
mm9_v1_chr5_-_24046180_24046274	0.0832591	RUNX1..3.p2	AK052929|Asb10|117590|ankyrin repeat and SOCS box-containing 10	BC141311|Asb10|117590|ankyrin repeat and SOCS box-containing 10	BC141313|Asb10|117590|ankyrin repeat and SOCS box-containing 10	AK028538|Asb10|117590|ankyrin repeat and SOCS box-containing 10	NM_080444|Asb10|117590|ankyrin repeat and SOCS box-containing 10	AF398971|Asb10|117590|ankyrin repeat and SOCS box-containing 10
mm9_v1_chr15_+_84511408_84511471	0.0830758	RUNX1..3.p2	NM_146061|Prr5|109270|proline rich 5 (renal)	AF482997|Prr5|109270|proline rich 5 (renal)	AK081231|Prr5|109270|proline rich 5 (renal)
mm9_v1_chr11_-_6100141_6100160	0.082645	RUNX1..3.p2	BC037090|Nudcd3|209586|NudC domain containing 3	AK050476|Nudcd3|209586|NudC domain containing 3	EU350933|Nudcd3|209586|NudC domain containing 3	AK036694|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr18_+_37866747_37866882	0.0824814	RUNX1..3.p2	BC059927|Pcdhga6|93714|protocadherin gamma subfamily A, 6	BC080852|Pcdhga6|93714|protocadherin gamma subfamily A, 6	AY013800|Pcdhga6|93714|protocadherin gamma subfamily A, 6	NM_033589|Pcdhga6|93714|protocadherin gamma subfamily A, 6
mm9_v1_chr6_+_114232618_114232629	0.0823286	RUNX1..3.p2	NM_178703|Slc6a1|232333|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm9_v1_chr3_-_90293255_90293284	0.082293	RUNX1..3.p2	
mm9_v1_chr8_+_91115856_91115922	0.082281	RUNX1..3.p2	AK192443|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	AK193874|Nkd1|93960|naked cuticle 1 homolog (Drosophila)
mm9_v1_chr19_-_36811137_36811158	0.0821584	RUNX1..3.p2	AK078735|Ppp1r3c|53412|protein phosphatase 1, regulatory (inhibitor) subunit 3C	BC052769|Ppp1r3c|53412|protein phosphatase 1, regulatory (inhibitor) subunit 3C
mm9_v1_chr8_-_106966899_106966946	0.0821519	RUNX1..3.p2	BC058645|Dync1li2|234663|dynein, cytoplasmic 1 light intermediate chain 2	AK050575|Dync1li2|234663|dynein, cytoplasmic 1 light intermediate chain 2	NM_001013380|Dync1li2|234663|dynein, cytoplasmic 1 light intermediate chain 2
mm9_v1_chr11_-_116704485_116704688	0.0819094	RUNX1..3.p2	EF527405|Jmjd6|107817|jumonji domain containing 6	BC006067|Jmjd6|107817|jumonji domain containing 6	BC011503|Jmjd6|107817|jumonji domain containing 6	AK122317|Jmjd6|107817|jumonji domain containing 6	AF304118|Jmjd6|107817|jumonji domain containing 6
mm9_v1_chr16_+_44765848_44765938	0.0817389	RUNX1..3.p2	NM_021325|Cd200r1|57781|CD200 receptor 1	AK154325|Cd200r1|57781|CD200 receptor 1	AK154722|Cd200r1|57781|CD200 receptor 1	BC052682|Cd200r1|57781|CD200 receptor 1	AK089173|Cd200r1|57781|CD200 receptor 1	AK089415|Cd200r1|57781|CD200 receptor 1	AK170735|Cd200r1|57781|CD200 receptor 1	AK171590|Cd200r1|57781|CD200 receptor 1	AK171130|Cd200r1|57781|CD200 receptor 1	AK054236|Cd200r1|57781|CD200 receptor 1
mm9_v1_chr7_-_134530626_134530679	0.0813699	RUNX1..3.p2	AK020267|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	BC031466|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	AK035847|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	NM_030226|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene
mm9_v1_chr11_+_72261267_72261276	0.0813263	RUNX1..3.p2	AK197626|Mybbp1a|18432|MYB binding protein (P160) 1a
mm9_v1_chr15_-_98748371_98748661	0.0813001	RUNX1..3.p2	AY052398|Lmbr1l|74775|limb region 1 like	AK003656|Lmbr1l|74775|limb region 1 like	BC023397|Lmbr1l|74775|limb region 1 like	AK170328|Lmbr1l|74775|limb region 1 like	AK143891|Lmbr1l|74775|limb region 1 like	AK030589|Lmbr1l|74775|limb region 1 like	AK049110|Lmbr1l|74775|limb region 1 like	NM_029098|Lmbr1l|74775|limb region 1 like	AK154968|Lmbr1l|74775|limb region 1 like
mm9_v1_chr10_+_80611198_80611320	0.0812337	RUNX1..3.p2	AK078088|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr11_+_59319892_59319945	0.0811793	RUNX1..3.p2	BC099591|4933439C10Rik|74476|RIKEN cDNA 4933439C10 gene
mm9_v1_chr11_+_50415579_50415615	0.0808215	RUNX1..3.p2	NM_175643|Adamts2|216725|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	BC046456|Adamts2|216725|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2
mm9_v1_chr3_+_94641626_94641643	0.0806932	RUNX1..3.p2	BC085188|Pogz|229584|pogo transposable element with ZNF domain	AK035255|Pogz|229584|pogo transposable element with ZNF domain	AK086062|Pogz|229584|pogo transposable element with ZNF domain	AK161889|Pogz|229584|pogo transposable element with ZNF domain	BC139432|Pogz|229584|pogo transposable element with ZNF domain	BC139433|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr13_+_89680457_89680462	0.0806215	RUNX1..3.p2	AK048107|Hapln1|12950|hyaluronan and proteoglycan link protein 1	AK003582|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr19_-_34549624_34549641	0.0804048	RUNX1..3.p2	AF059213|Ch25h|12642|cholesterol 25-hydroxylase	NM_009890|Ch25h|12642|cholesterol 25-hydroxylase	AK152770|Ch25h|12642|cholesterol 25-hydroxylase	AK160657|Ch25h|12642|cholesterol 25-hydroxylase	AK140360|Ch25h|12642|cholesterol 25-hydroxylase
mm9_v1_chr15_+_78075220_78075493	0.0802903	RUNX1..3.p2	NM_008677|Ncf4|17972|neutrophil cytosolic factor 4	AK150510|Ncf4|17972|neutrophil cytosolic factor 4	AB002665|Ncf4|17972|neutrophil cytosolic factor 4	U59488|Ncf4|17972|neutrophil cytosolic factor 4	BC025517|Ncf4|17972|neutrophil cytosolic factor 4	FJ168470|Ncf4|17972|neutrophil cytosolic factor 4	AK171315|Ncf4|17972|neutrophil cytosolic factor 4
mm9_v1_chr2_-_25127860_25127956	0.0800704	RUNX1..3.p2	AK088418|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	AK158412|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	BC037081|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	BC023033|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	BC048360|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	AB041656|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	AK003356|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	NM_023464|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1
mm9_v1_chr8_+_87583954_87584056	0.0798492	RUNX1..3.p2	AK156709|Fbxw9|68628|F-box and WD-40 domain protein 9	NM_026791|Fbxw9|68628|F-box and WD-40 domain protein 9	BC043658|Fbxw9|68628|F-box and WD-40 domain protein 9
mm9_v1_chr9_+_45820921_45821106	0.079106	RUNX1..3.p2	BC080688|Sik3|70661|SIK family kinase 3	BC063268|Sik3|70661|SIK family kinase 3
mm9_v1_chr7_-_134550257_134550335	0.079056	RUNX1..3.p2	BC026397|Zfp764|233893|zinc finger protein 764	AK053795|Zfp764|233893|zinc finger protein 764	AK033218|Zfp764|233893|zinc finger protein 764	AK042873|Zfp764|233893|zinc finger protein 764	NM_001167832|Zfp764|233893|zinc finger protein 764	NM_146203|Zfp764|233893|zinc finger protein 764
mm9_v1_chr10_-_60610398_60610452	0.0790379	RUNX1..3.p2	NM_009163|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr15_+_88650115_88650124	0.0788939	RUNX1..3.p2	BC047370|Creld2|76737|cysteine-rich with EGF-like domains 2
mm9_v1_chr5_-_21151348_21151451	0.0785318	RUNX1..3.p2	BC145291|Fbxl13|320118|F-box and leucine-rich repeat protein 13	BC145292|Fbxl13|320118|F-box and leucine-rich repeat protein 13	AK030172|Fbxl13|320118|F-box and leucine-rich repeat protein 13	AK029566|Fbxl13|320118|F-box and leucine-rich repeat protein 13	NM_177076|Fbxl13|320118|F-box and leucine-rich repeat protein 13
mm9_v1_chr1_+_173275837_173275844	0.0784643	RUNX1..3.p2	Y17393|Pfdn2|18637|prefoldin 2	BC026839|Pfdn2|18637|prefoldin 2
mm9_v1_chr9_+_44134859_44135076	0.0783476	RUNX1..3.p2	BC010474|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	NM_007875|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK008246|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK008317|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK164129|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	X65603|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm9_v1_chr7_+_106416854_106416924	0.0782891	RUNX1..3.p2	NM_001043355|Mtap6|17760|microtubule-associated protein 6	AK154455|Mtap6|17760|microtubule-associated protein 6	Y16032|Mtap6|17760|microtubule-associated protein 6
mm9_v1_chr5_+_142877419_142877473	0.0781989	RUNX1..3.p2	NM_199068|Foxk1|17425|forkhead box K1	AK147375|Foxk1|17425|forkhead box K1	L26507|Foxk1|17425|forkhead box K1	U95016|Foxk1|17425|forkhead box K1	BC060238|Foxk1|17425|forkhead box K1
mm9_v1_chr18_-_42739132_42739305	0.0781492	RUNX1..3.p2	AY255533|Gpr151|240239|G protein-coupled receptor 151	AY351677|Gpr151|240239|G protein-coupled receptor 151	BC120520|Gpr151|240239|G protein-coupled receptor 151	BC120526|Gpr151|240239|G protein-coupled receptor 151	AJ564167|Gpr151|240239|G protein-coupled receptor 151	NM_181543|Gpr151|240239|G protein-coupled receptor 151
mm9_v1_chr12_+_16817772_16817797	0.0780348	RUNX1..3.p2	AK035116|E2f6|50496|E2F transcription factor 6	AK146792|E2f6|50496|E2F transcription factor 6	BC057929|E2f6|50496|E2F transcription factor 6	BC019166|E2f6|50496|E2F transcription factor 6
mm9_v1_chr2_+_129123094_129123108	0.0777624	RUNX1..3.p2	AK042010|LOC100503468|100503468|hypothetical LOC100503468
mm9_v1_chr7_-_149763980_149764029	0.0774691	RUNX1..3.p2	AK135234|H19|14955|H19 fetal liver mRNA	AK145379|H19|14955|H19 fetal liver mRNA
mm9_v1_chr8_+_125641346_125641374	0.0772873	RUNX1..3.p2	AK049823|Cpne7|102278|copine VII	BC119328|Cpne7|102278|copine VII	BC137595|Cpne7|102278|copine VII
mm9_v1_chr11_+_98913612_98913639	0.0767172	RUNX1..3.p2	
mm9_v1_chr19_-_40261753_40261779	0.0765316	RUNX1..3.p2	BC022151|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC023894|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AY227736|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC034831|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC016494|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AK050082|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	NM_145499|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70
mm9_v1_chr10_+_79479416_79479491	0.076475	RUNX1..3.p2	AK159194|Hmha1|70719|histocompatibility (minor) HA-1	NM_001142701|Hmha1|70719|histocompatibility (minor) HA-1	AK170262|Hmha1|70719|histocompatibility (minor) HA-1	AK171304|Hmha1|70719|histocompatibility (minor) HA-1	AK159474|Hmha1|70719|histocompatibility (minor) HA-1
mm9_v1_chr9_-_45762994_45763069	0.0763736	RUNX1..3.p2	BC051101|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr7_+_86059126_86059232	0.0763683	RUNX1..3.p2	CT010213|Isg20|57444|interferon-stimulated protein
mm9_v1_chr1_-_72921098_72921102	0.0763362	RUNX1..3.p2	L12447|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr10_+_59747208_59747231	0.0761743	RUNX1..3.p2	AK149785|Psap|19156|prosaposin	NM_001146124|Psap|19156|prosaposin
mm9_v1_chr7_+_148645664_148645872	0.075857	RUNX1..3.p2	BC026807|Pnpla2|66853|patatin-like phospholipase domain containing 2
mm9_v1_chrX_-_137077133_137077229	0.0758417	RUNX1..3.p2	AF201287|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr3_+_135101248_135101271	0.0758009	RUNX1..3.p2	AK167138|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK003163|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK009276|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK009936|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr7_-_52715059_52715287	0.07553	RUNX1..3.p2	BC150761|Ftl2|14337|ferritin light chain 2	BC081462|Ftl1|14325|ferritin light chain 1	BC106145|Ftl1|14325|ferritin light chain 1	J04716|Ftl1|14325|ferritin light chain 1	BC092259|Ftl1|14325|ferritin light chain 1	BC083350|Ftl1|14325|ferritin light chain 1	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene	BC019840|Ftl1|14325|ferritin light chain 1	BC085309|Ftl1|14325|ferritin light chain 1	BC106146|Ftl1|14325|ferritin light chain 1	BC020403|Ftl1|14325|ferritin light chain 1	AK152385|Ftl1|14325|ferritin light chain 1	AK150481|Ftl1|14325|ferritin light chain 1	AK152393|Ftl1|14325|ferritin light chain 1	AK167410|Ftl1|14325|ferritin light chain 1	AK168862|Ftl1|14325|ferritin light chain 1	AK002253|Ftl1|14325|ferritin light chain 1	AK002547|Ftl1|14325|ferritin light chain 1	AK011029|Ftl1|14325|ferritin light chain 1	AK150480|Ftl1|14325|ferritin light chain 1	AK152030|Ftl1|14325|ferritin light chain 1	AK152564|Ftl1|14325|ferritin light chain 1	AK152612|Ftl1|14325|ferritin light chain 1	AK168310|Ftl1|14325|ferritin light chain 1	AK168735|Ftl1|14325|ferritin light chain 1	AK168866|Ftl1|14325|ferritin light chain 1	AK169100|Ftl1|14325|ferritin light chain 1	AK002242|Ftl1|14325|ferritin light chain 1	AK011009|Ftl1|14325|ferritin light chain 1	AK011244|Ftl1|14325|ferritin light chain 1	AK075620|Ftl1|14325|ferritin light chain 1	AK145265|Ftl1|14325|ferritin light chain 1	AK145658|Ftl1|14325|ferritin light chain 1	AK150960|Ftl1|14325|ferritin light chain 1	AK151255|Ftl1|14325|ferritin light chain 1	AK159574|Ftl1|14325|ferritin light chain 1	AK169159|Ftl1|14325|ferritin light chain 1	AK088647|Ftl1|14325|ferritin light chain 1	NM_010240|Ftl1|14325|ferritin light chain 1
mm9_v1_chr7_+_52965052_52965376	0.0753691	RUNX1..3.p2	AK192990|Dbp|13170|D site albumin promoter binding protein
mm9_v1_chr5_+_107963729_107963775	0.07525	RUNX1..3.p2	AK006463|1700028K03Rik|76421|RIKEN cDNA 1700028K03 gene	NM_175241|1700028K03Rik|76421|RIKEN cDNA 1700028K03 gene	NM_182745|1700028K03Rik|76421|RIKEN cDNA 1700028K03 gene	AK032886|1700028K03Rik|76421|RIKEN cDNA 1700028K03 gene	AK029908|1700028K03Rik|76421|RIKEN cDNA 1700028K03 gene
mm9_v1_chr13_+_32894609_32894767	0.0751297	RUNX1..3.p2	AF208046|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr19_+_8969711_8969726	0.0750948	RUNX1..3.p2	AK179191|Ints5|109077|integrator complex subunit 5	AK183632|Ints5|109077|integrator complex subunit 5
mm9_v1_chr1_-_193007202_193007214	0.0748428	RUNX1..3.p2	BC019946|Atf3|11910|activating transcription factor 3	NM_007498|Atf3|11910|activating transcription factor 3	AK133965|Atf3|11910|activating transcription factor 3
mm9_v1_chr15_-_99079369_99079394	0.0746721	RUNX1..3.p2	AK158611|Mcrs1|51812|microspherule protein 1
mm9_v1_chr12_+_10397864_10397904	0.0746344	RUNX1..3.p2	AK142290|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)
mm9_v1_chr8_+_64406883_64407005	0.0744815	RUNX1..3.p2	AK036495|Ddx60|234311|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60	NM_001081215|Ddx60|234311|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60	BC043663|Ddx60|234311|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
mm9_v1_chr9_+_120864938_120864992	0.0742777	RUNX1..3.p2	AK219273|Ctnnb1|12387|catenin (cadherin associated protein), beta 1
mm9_v1_chr5_-_139960341_139960349	0.0742455	RUNX1..3.p2	AF224494|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr10_+_62487259_62487259	0.0739162	RUNX1..3.p2	AK014198|Pbld2|67307|phenazine biosynthesis-like protein domain containing 2	NM_026085|Pbld2|67307|phenazine biosynthesis-like protein domain containing 2
mm9_v1_chr10_+_79482419_79482458	0.0739065	RUNX1..3.p2	BC053750|Hmha1|70719|histocompatibility (minor) HA-1	NM_027521|Hmha1|70719|histocompatibility (minor) HA-1	AK044860|Hmha1|70719|histocompatibility (minor) HA-1
mm9_v1_chr4_-_129055233_129055271	0.0731499	RUNX1..3.p2	AK010736|Zbtb8a|73680|zinc finger and BTB domain containing 8a	NM_028603|Zbtb8a|73680|zinc finger and BTB domain containing 8a
mm9_v1_chr7_-_27963760_27963951	0.0730629	RUNX1..3.p2	AB232592|Rab4b|19342|RAB4B, member RAS oncogene family	AK140513|Rab4b|19342|RAB4B, member RAS oncogene family	BC007147|Rab4b|19342|RAB4B, member RAS oncogene family	AF408432|Rab4b|19342|RAB4B, member RAS oncogene family	BC096654|Rab4b|19342|RAB4B, member RAS oncogene family	AK005314|Rab4b|19342|RAB4B, member RAS oncogene family	NM_029391|Rab4b|19342|RAB4B, member RAS oncogene family	AK170552|Rab4b|19342|RAB4B, member RAS oncogene family
mm9_v1_chr13_+_119503505_119503505	0.072992	RUNX1..3.p2	AK045267|Fgf10|14165|fibroblast growth factor 10	NM_008002|Fgf10|14165|fibroblast growth factor 10
mm9_v1_chr8_+_129823507_129823551	0.072968	RUNX1..3.p2	AY856081|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	AY856082|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013581|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013580|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)
mm9_v1_chr7_+_114738564_114738564	0.0728558	RUNX1..3.p2	NM_008905|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm9_v1_chr19_-_5843325_5843365	0.0728529	RUNX1..3.p2	AK206554|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)
mm9_v1_chr13_-_69138164_69138176	0.0725548	RUNX1..3.p2	BC037107|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr6_-_136824217_136824271	0.07243	RUNX1..3.p2	BC018338|Mgp|17313|matrix Gla protein	D00613|Mgp|17313|matrix Gla protein
mm9_v1_chr11_-_6100014_6100127	0.0722047	RUNX1..3.p2	BC052089|Nudcd3|209586|NudC domain containing 3	AK215033|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr1_+_178744942_178745053	0.0721851	RUNX1..3.p2	NM_029756|Sdccag8|76816|serologically defined colon cancer antigen 8	AK136921|Sdccag8|76816|serologically defined colon cancer antigen 8	AK051683|Sdccag8|76816|serologically defined colon cancer antigen 8	AK132316|Sdccag8|76816|serologically defined colon cancer antigen 8	AK012392|Sdccag8|76816|serologically defined colon cancer antigen 8	AK017691|Sdccag8|76816|serologically defined colon cancer antigen 8	BC016244|Sdccag8|76816|serologically defined colon cancer antigen 8	BC025138|Sdccag8|76816|serologically defined colon cancer antigen 8	AK133622|Sdccag8|76816|serologically defined colon cancer antigen 8
mm9_v1_chr18_-_16967557_16967557	0.0721379	RUNX1..3.p2	NM_007664|Cdh2|12558|cadherin 2
mm9_v1_chr8_+_75103478_75103489	0.0720485	RUNX1..3.p2	AK186226|Tmem38a|74166|transmembrane protein 38A	AK210010|Tmem38a|74166|transmembrane protein 38A	AK210187|Tmem38a|74166|transmembrane protein 38A	AK215082|Tmem38a|74166|transmembrane protein 38A
mm9_v1_chr2_+_180460024_180460083	0.0720254	RUNX1..3.p2	NM_183161|Slc17a9|228993|solute carrier family 17, member 9	BC019537|Slc17a9|228993|solute carrier family 17, member 9
mm9_v1_chr1_-_158404299_158404465	0.0718707	RUNX1..3.p2	AK213760|Soat1|20652|sterol O-acyltransferase 1	AK054149|Soat1|20652|sterol O-acyltransferase 1	AK142486|Soat1|20652|sterol O-acyltransferase 1	DQ903181|Soat1|20652|sterol O-acyltransferase 1	S81092|Soat1|20652|sterol O-acyltransferase 1	AK159393|Soat1|20652|sterol O-acyltransferase 1	AK159529|Soat1|20652|sterol O-acyltransferase 1	AK160017|Soat1|20652|sterol O-acyltransferase 1	NM_009230|Soat1|20652|sterol O-acyltransferase 1
mm9_v1_chr11_-_23795075_23795194	0.0718692	RUNX1..3.p2	DQ103505|Papolg|216578|poly(A) polymerase gamma
mm9_v1_chr16_-_8738377_8738512	0.0718503	RUNX1..3.p2	AF548565|Usp7|252870|ubiquitin specific peptidase 7	NM_001003918|Usp7|252870|ubiquitin specific peptidase 7	BC046963|Usp7|252870|ubiquitin specific peptidase 7
mm9_v1_chr2_+_21127350_21127413	0.0715791	RUNX1..3.p2	AK029518|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_001001297|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_177588|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK083895|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK033465|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK087148|Thnsl1|208967|threonine synthase-like 1 (bacterial)
mm9_v1_chr1_+_140864297_140864301	0.071425	RUNX1..3.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr4_-_143967835_143967835	0.0712839	RUNX1..3.p2	NM_001115077|Gm13125|627009|predicted gene 13125
mm9_v1_chr10_-_90545046_90545173	0.0710957	RUNX1..3.p2	BC131683|Apaf1|11783|apoptotic peptidase activating factor 1	BC131684|Apaf1|11783|apoptotic peptidase activating factor 1	AK035569|Apaf1|11783|apoptotic peptidase activating factor 1
mm9_v1_chr9_-_13631432_13631439	0.0710859	RUNX1..3.p2	AK019414|Cep57|74360|centrosomal protein 57	AK167523|Cep57|74360|centrosomal protein 57
mm9_v1_chr17_+_12571494_12571524	0.0708305	RUNX1..3.p2	BC057186|Plg|18815|plasminogen	AK132254|Plg|18815|plasminogen	J04766|Plg|18815|plasminogen	AK040840|Plg|18815|plasminogen
mm9_v1_chr2_+_162758440_162758589	0.0706586	RUNX1..3.p2	AK051608|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr4_-_134885357_134885401	0.070499	RUNX1..3.p2	AK219253|Srrm1|51796|serine/arginine repetitive matrix 1
mm9_v1_chr6_+_108765009_108765022	0.0702508	RUNX1..3.p2	AK201340|Arl8b|67166|ADP-ribosylation factor-like 8B	AK206384|Arl8b|67166|ADP-ribosylation factor-like 8B	AK219184|Arl8b|67166|ADP-ribosylation factor-like 8B	AK219830|Arl8b|67166|ADP-ribosylation factor-like 8B
mm9_v1_chr17_+_21095931_21095944	0.0701435	RUNX1..3.p2	
mm9_v1_chr17_+_29227908_29227961	0.0700938	RUNX1..3.p2	NM_001111099|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr10_+_68186493_68186584	0.0700319	RUNX1..3.p2	AK028283|Tmem26|327766|transmembrane protein 26	NM_177794|Tmem26|327766|transmembrane protein 26	AK084351|Tmem26|327766|transmembrane protein 26	AK143866|Tmem26|327766|transmembrane protein 26	BC117502|Tmem26|327766|transmembrane protein 26	BC117503|Tmem26|327766|transmembrane protein 26
mm9_v1_chr9_-_82826139_82826181	0.0699277	RUNX1..3.p2	BC068022|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr11_+_117623703_117623821	0.0696643	RUNX1..3.p2	AK137381|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr1_+_93041665_93041717	0.0695487	RUNX1..3.p2	AK133355|Rbm44|329207|RNA binding motif protein 44	NM_001033408|Rbm44|329207|RNA binding motif protein 44	BC150950|Rbm44|329207|RNA binding motif protein 44
mm9_v1_chr7_-_54051038_54051113	0.0694471	RUNX1..3.p2	AK157182|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AF534396|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AF534397|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AF534399|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AK141088|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)	AK154612|Hps5|246694|Hermansky-Pudlak syndrome 5 homolog (human)
mm9_v1_chr3_+_66789859_66789903	0.0692685	RUNX1..3.p2	BC043045|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr10_+_117641997_117642023	0.0690199	RUNX1..3.p2	AJ249491|Il22|50929|interleukin 22	BC104348|Il22|50929|interleukin 22	BC104349|Il22|50929|interleukin 22	NM_016971|Il22|50929|interleukin 22	BC116235|Il22|50929|interleukin 22
mm9_v1_chr7_-_20169533_20169553	0.0688727	RUNX1..3.p2	
mm9_v1_chr3_+_89580481_89580505	0.0688571	RUNX1..3.p2	BC060966|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr7_-_108971734_108971860	0.0687423	RUNX1..3.p2	
mm9_v1_chr19_-_59018112_59018143	0.0686719	RUNX1..3.p2	AK076683|Hspa12a|73442|heat shock protein 12A	AK076668|Hspa12a|73442|heat shock protein 12A	AK087732|Hspa12a|73442|heat shock protein 12A
mm9_v1_chr18_-_25637786_25637794	0.0685264	RUNX1..3.p2	AK078071|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr4_-_150379857_150379983	0.0682256	RUNX1..3.p2	DQ196346|Per3|18628|period homolog 3 (Drosophila)
mm9_v1_chr5_-_31395853_31395951	0.068171	RUNX1..3.p2	U76007|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3	AK165796|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3	BC066199|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3	AK144568|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3	NM_011773|Slc30a3|22784|solute carrier family 30 (zinc transporter), member 3
mm9_v1_chr11_-_62190182_62190262	0.0680497	RUNX1..3.p2	AB093281|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr9_-_71326295_71326316	0.0677261	RUNX1..3.p2	
mm9_v1_chr17_-_30729995_30730086	0.0675825	RUNX1..3.p2	
mm9_v1_chr12_-_70993825_70993856	0.0675624	RUNX1..3.p2	AK084891|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr3_-_107789334_107789388	0.0673688	RUNX1..3.p2	NM_008183|Gstm2|14863|glutathione S-transferase, mu 2	BC037068|Gstm2|14863|glutathione S-transferase, mu 2	AK002845|Gstm2|14863|glutathione S-transferase, mu 2
mm9_v1_chr3_-_88262805_88262805	0.0672776	RUNX1..3.p2	NM_001163491|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr7_-_20118330_20118330	0.0672138	RUNX1..3.p2	BC024868|Lrrc68|232947|leucine rich repeat containing 68
mm9_v1_chr6_-_83071542_83071559	0.0671306	RUNX1..3.p2	BC005666|Wbp1|22377|WW domain binding protein 1
mm9_v1_chr11_+_49933305_49933398	0.0671051	RUNX1..3.p2	BC038527|LOC552912|552912|hypothetical LOC552912
mm9_v1_chr2_-_4544898_4544915	0.0670243	RUNX1..3.p2	BC019370|Prpf18|67229|PRP18 pre-mRNA processing factor 18 homolog (yeast)
mm9_v1_chr4_-_40800983_40800984	0.0668956	RUNX1..3.p2	D00314|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm9_v1_chr11_-_74491006_74491182	0.0667919	RUNX1..3.p2	AK152284|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	AK164276|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm9_v1_chr2_+_163245523_163245600	0.066712	RUNX1..3.p2	AK013849|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene	AK020931|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene
mm9_v1_chrX_-_148777014_148777028	0.0662102	RUNX1..3.p2	NM_029836|Tspyl2|52808|TSPY-like 2
mm9_v1_chr2_+_167514414_167514452	0.0661146	RUNX1..3.p2	NM_009883|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta	X62600|Cebpb|12608|CCAAT/enhancer binding protein (C/EBP), beta
mm9_v1_chr12_-_86097486_86097537	0.0659947	RUNX1..3.p2	
mm9_v1_chr17_+_71168939_71168940	0.0653455	RUNX1..3.p2	AK034215|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr7_-_29551412_29551528	0.0653183	RUNX1..3.p2	AK156731|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	AY176058|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	AK010218|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	BC021938|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	U19799|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
mm9_v1_chr14_+_63760617_63760645	0.0652788	RUNX1..3.p2	AK190827|Ctsb|13030|cathepsin B
mm9_v1_chr5_+_135582754_135582797	0.0652652	RUNX1..3.p2	AK143999|Mlxipl|58805|MLX interacting protein-like	AK143800|Mlxipl|58805|MLX interacting protein-like	AF245475|Mlxipl|58805|MLX interacting protein-like	AF245476|Mlxipl|58805|MLX interacting protein-like	AF245477|Mlxipl|58805|MLX interacting protein-like	AF245478|Mlxipl|58805|MLX interacting protein-like	AF245479|Mlxipl|58805|MLX interacting protein-like	NM_021455|Mlxipl|58805|MLX interacting protein-like	AF156604|Mlxipl|58805|MLX interacting protein-like	BC064053|Mlxipl|58805|MLX interacting protein-like
mm9_v1_chr13_+_56710896_56710979	0.0650468	RUNX1..3.p2	AK135536|Tgfbi|21810|transforming growth factor, beta induced	AK142323|Tgfbi|21810|transforming growth factor, beta induced	AK169912|Tgfbi|21810|transforming growth factor, beta induced	AK150969|Tgfbi|21810|transforming growth factor, beta induced	AK152365|Tgfbi|21810|transforming growth factor, beta induced	AK084431|Tgfbi|21810|transforming growth factor, beta induced	AK150449|Tgfbi|21810|transforming growth factor, beta induced	AK150833|Tgfbi|21810|transforming growth factor, beta induced	AK152662|Tgfbi|21810|transforming growth factor, beta induced	AK164373|Tgfbi|21810|transforming growth factor, beta induced	AK151680|Tgfbi|21810|transforming growth factor, beta induced	AK155828|Tgfbi|21810|transforming growth factor, beta induced	AK159711|Tgfbi|21810|transforming growth factor, beta induced	AK170495|Tgfbi|21810|transforming growth factor, beta induced	AK155572|Tgfbi|21810|transforming growth factor, beta induced	NM_009369|Tgfbi|21810|transforming growth factor, beta induced	L19932|Tgfbi|21810|transforming growth factor, beta induced	BC129900|Tgfbi|21810|transforming growth factor, beta induced	BC129901|Tgfbi|21810|transforming growth factor, beta induced
mm9_v1_chr1_+_129670740_129670806	0.0648317	RUNX1..3.p2	BC054122|Ccnt2|72949|cyclin T2	NM_028399|Ccnt2|72949|cyclin T2	AK156231|Ccnt2|72949|cyclin T2	AK154439|Ccnt2|72949|cyclin T2	AK156621|Ccnt2|72949|cyclin T2	AK152399|Ccnt2|72949|cyclin T2	AK036772|Ccnt2|72949|cyclin T2	AK013634|Ccnt2|72949|cyclin T2	AK049863|Ccnt2|72949|cyclin T2
mm9_v1_chr5_-_145118920_145118980	0.064822	RUNX1..3.p2	AK004918|Baiap2l1|66898|BAI1-associated protein 2-like 1	NM_025833|Baiap2l1|66898|BAI1-associated protein 2-like 1
mm9_v1_chr1_+_87804443_87804463	0.0647704	RUNX1..3.p2	AK190372|Itm2c|64294|integral membrane protein 2C
mm9_v1_chr11_+_87881747_87881842	0.0645246	RUNX1..3.p2	AF104410|Vezf1|22344|vascular endothelial zinc finger 1	NM_016686|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr11_+_68913653_68913659	0.0644225	RUNX1..3.p2	AK148202|Per1|18626|period homolog 1 (Drosophila)	AK172958|Per1|18626|period homolog 1 (Drosophila)	NM_001159367|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr1_-_97564139_97564174	0.0642779	RUNX1..3.p2	BC060112|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AJ223956|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_001159745|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_009183|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	X86000|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr8_+_35228215_35228301	0.0640606	RUNX1..3.p2	
mm9_v1_chr15_-_7348093_7348275	0.0640516	RUNX1..3.p2	DQ223720|Egflam|268780|EGF-like, fibronectin type III and laminin G domains	BC150710|Egflam|268780|EGF-like, fibronectin type III and laminin G domains	BC095994|Egflam|268780|EGF-like, fibronectin type III and laminin G domains	AK041546|Egflam|268780|EGF-like, fibronectin type III and laminin G domains	AK087659|Egflam|268780|EGF-like, fibronectin type III and laminin G domains
mm9_v1_chr10_+_127832280_127832285	0.0639164	RUNX1..3.p2	
mm9_v1_chr17_-_35263237_35263384	0.0638153	RUNX1..3.p2	AK009290|Gpank1|81845|G patch domain and ankyrin repeats 1
mm9_v1_chr11_+_67779978_67779989	0.0637974	RUNX1..3.p2	AK035105|Stx8|55943|syntaxin 8	BC048167|Stx8|55943|syntaxin 8	NM_018768|Stx8|55943|syntaxin 8	BC038186|Stx8|55943|syntaxin 8	AF093064|Stx8|55943|syntaxin 8	AB040054|Stx8|55943|syntaxin 8
mm9_v1_chr9_+_91263809_91263809	0.0633395	RUNX1..3.p2	AK046913|Zic4|22774|zinc finger protein of the cerebellum 4	NM_009576|Zic4|22774|zinc finger protein of the cerebellum 4
mm9_v1_chr13_+_21902235_21902335	0.0629437	RUNX1..3.p2	BC147161|Hist1h2ap|319171|histone cluster 1, H2ap	BC147162|Hist1h2ap|319171|histone cluster 1, H2ap	NM_001177544|Hist1h2ao|665433|histone cluster 1, H2ao	AK145443|Hist1h2ap|319171|histone cluster 1, H2ap	AK146846|Hist1h2ap|319171|histone cluster 1, H2ap	BC062251|Hist1h2ap|319171|histone cluster 1, H2ap	BC090402|Hist1h2ap|319171|histone cluster 1, H2ap	BC110626|Hist1h2ap|319171|histone cluster 1, H2ap	BC116373|Hist1h2ai|319191|histone cluster 1, H2ai	BC127164|Hist1h2ai|319191|histone cluster 1, H2ai	BC133661|Hist1h2ap|319171|histone cluster 1, H2ap	BC134370|Hist1h2ah|319168|histone cluster 1, H2ah	NM_178185|Hist1h2ap|319171|histone cluster 1, H2ap
mm9_v1_chr16_-_4523061_4523074	0.0628835	RUNX1..3.p2	AK036394|Srl|106393|sarcalumenin	BC145687|Srl|106393|sarcalumenin
mm9_v1_chr4_+_134420419_134420535	0.0628317	RUNX1..3.p2	BC145805|Rhd|19746|Rh blood group, D antigen	NM_011270|Rhd|19746|Rh blood group, D antigen	AF057524|Rhd|19746|Rh blood group, D antigen	AK089642|Rhd|19746|Rh blood group, D antigen	AF069311|Rhd|19746|Rh blood group, D antigen	AK079335|Rhd|19746|Rh blood group, D antigen	AK171641|Rhd|19746|Rh blood group, D antigen	AB015189|Rhd|19746|Rh blood group, D antigen	AB015190|Rhd|19746|Rh blood group, D antigen	AF047827|Rhd|19746|Rh blood group, D antigen	AK157850|Rhd|19746|Rh blood group, D antigen	AF012430|Rhd|19746|Rh blood group, D antigen
mm9_v1_chr1_+_137647796_137647915	0.0625473	RUNX1..3.p2	AK216299|Csrp1|13007|cysteine and glycine-rich protein 1	AK178295|Csrp1|13007|cysteine and glycine-rich protein 1	AK188439|Csrp1|13007|cysteine and glycine-rich protein 1	AK217070|Csrp1|13007|cysteine and glycine-rich protein 1
mm9_v1_chr7_-_127821033_127821198	0.0624603	RUNX1..3.p2	AK034016|9030407P20Rik|71568|RIKEN cDNA 9030407P20 gene	AK018490|9030407P20Rik|71568|RIKEN cDNA 9030407P20 gene
mm9_v1_chrX_+_63902456_63902492	0.0622967	RUNX1..3.p2	NM_001161431|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr7_-_29910144_29910197	0.0620799	RUNX1..3.p2	D21796|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AY268935|Ryr1|20190|ryanodine receptor 1, skeletal muscle	NM_009109|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AK081432|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AK143310|Ryr1|20190|ryanodine receptor 1, skeletal muscle
mm9_v1_chr4_+_65274679_65274844	0.0617959	RUNX1..3.p2	
mm9_v1_chr9_-_45763233_45763277	0.0616308	RUNX1..3.p2	AK155875|Sidt2|214597|SID1 transmembrane family, member 2	AK152371|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr4_-_49519333_49519379	0.0615816	RUNX1..3.p2	U95215|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase	BC012683|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase	AK017923|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase
mm9_v1_chr3_-_127256215_127256266	0.0613759	RUNX1..3.p2	BC023165|Larp7|28036|La ribonucleoprotein domain family, member 7	AK015041|Larp7|28036|La ribonucleoprotein domain family, member 7	AK012772|Larp7|28036|La ribonucleoprotein domain family, member 7	AK082815|Larp7|28036|La ribonucleoprotein domain family, member 7	NM_138593|Larp7|28036|La ribonucleoprotein domain family, member 7
mm9_v1_chr12_+_117316195_117316297	0.0611426	RUNX1..3.p2	AK038743|Vipr2|22355|vasoactive intestinal peptide receptor 2	NM_009511|Vipr2|22355|vasoactive intestinal peptide receptor 2	AK142357|Vipr2|22355|vasoactive intestinal peptide receptor 2	D28132|Vipr2|22355|vasoactive intestinal peptide receptor 2	BC138572|Vipr2|22355|vasoactive intestinal peptide receptor 2
mm9_v1_chr7_+_150191542_150191714	0.0611146	RUNX1..3.p2	AK154694|Tspan32|27027|tetraspanin 32	NM_001128081|Tspan32|27027|tetraspanin 32	NM_001128082|Tspan32|27027|tetraspanin 32	NM_020286|Tspan32|27027|tetraspanin 32	AK171199|Tspan32|27027|tetraspanin 32	BC051204|Tspan32|27027|tetraspanin 32	BC055858|Tspan32|27027|tetraspanin 32	AK017989|Tspan32|27027|tetraspanin 32	AF291425|Tspan32|27027|tetraspanin 32	AJ279791|Tspan32|27027|tetraspanin 32	AJ279792|Tspan32|27027|tetraspanin 32	AJ279793|Tspan32|27027|tetraspanin 32	AJ279794|Tspan32|27027|tetraspanin 32	AJ279795|Tspan32|27027|tetraspanin 32	AF175771|Tspan32|27027|tetraspanin 32
mm9_v1_chr4_-_104548965_104549005	0.0610676	RUNX1..3.p2	AB077296|C8a|230558|complement component 8, alpha polypeptide	AB077297|C8a|230558|complement component 8, alpha polypeptide	AB077298|C8a|230558|complement component 8, alpha polypeptide	BC027748|C8a|230558|complement component 8, alpha polypeptide	AK090245|C8a|230558|complement component 8, alpha polypeptide	AB077295|C8a|230558|complement component 8, alpha polypeptide	NM_146148|C8a|230558|complement component 8, alpha polypeptide
mm9_v1_chrX_-_71330931_71331012	0.0610177	RUNX1..3.p2	AF158181|Mecp2|17257|methyl CpG binding protein 2	NM_010788|Mecp2|17257|methyl CpG binding protein 2	AK041453|Mecp2|17257|methyl CpG binding protein 2	BC027153|Mecp2|17257|methyl CpG binding protein 2	AK158664|Mecp2|17257|methyl CpG binding protein 2	NM_001081979|Mecp2|17257|methyl CpG binding protein 2
mm9_v1_chr8_+_72758479_72758521	0.0609546	RUNX1..3.p2	AK137294|Sugp2|234373|SURP and G patch domain containing 2
mm9_v1_chr10_+_80820218_80820329	0.060931	RUNX1..3.p2	AK154902|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK170185|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK149678|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK154386|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	AK171084|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	BC118620|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	BC119790|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene	NM_028657|F630110N24Rik|73822|RIKEN cDNA F630110N24 gene
mm9_v1_chr2_-_27102239_27102352	0.060796	RUNX1..3.p2	BC003456|Sardh|192166|sarcosine dehydrogenase	NM_138665|Sardh|192166|sarcosine dehydrogenase	AK163515|Sardh|192166|sarcosine dehydrogenase
mm9_v1_chr12_+_16817904_16818081	0.0606328	RUNX1..3.p2	BC037656|E2f6|50496|E2F transcription factor 6	AB221552|E2f6|50496|E2F transcription factor 6
mm9_v1_chr15_-_66801093_66801186	0.0604719	RUNX1..3.p2	BC141246|Ndrg1|17988|N-myc downstream regulated gene 1	BC171968|Ndrg1|17988|N-myc downstream regulated gene 1	BC015282|Ndrg1|17988|N-myc downstream regulated gene 1	U52073|Ndrg1|17988|N-myc downstream regulated gene 1	BC071235|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr4_+_154335029_154335081	0.0603859	RUNX1..3.p2	AK139390|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	AK078170|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	AK087508|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	AK156545|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	NM_010419|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	BC099863|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	BC099864|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	BC099865|Hes5|15208|hairy and enhancer of split 5 (Drosophila)	BC103539|Hes5|15208|hairy and enhancer of split 5 (Drosophila)
mm9_v1_chr5_-_135101318_135101328	0.0602223	RUNX1..3.p2	AK188319|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr11_-_77978936_77979062	0.0601724	RUNX1..3.p2	AK178796|Traf4|22032|TNF receptor associated factor 4	AF233449|Traf4|22032|TNF receptor associated factor 4	AK035056|Traf4|22032|TNF receptor associated factor 4	AK040877|Traf4|22032|TNF receptor associated factor 4	BC020455|Traf4|22032|TNF receptor associated factor 4	AK053900|Traf4|22032|TNF receptor associated factor 4	NM_009423|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr5_-_114541313_114541402	0.0600913	RUNX1..3.p2	BC059878|Svop|68666|SV2 related protein	AK047655|Svop|68666|SV2 related protein	AK053833|Svop|68666|SV2 related protein	AK160770|Svop|68666|SV2 related protein	AK047764|Svop|68666|SV2 related protein	AK082744|Svop|68666|SV2 related protein	NM_026805|Svop|68666|SV2 related protein
mm9_v1_chr2_+_180716817_180716845	0.0598581	RUNX1..3.p2	
mm9_v1_chrX_+_133276320_133276367	0.0598523	RUNX1..3.p2	AK084423|BC065397|436230|cDNA sequence BC065397
mm9_v1_chr7_-_53152003_53152080	0.0597459	RUNX1..3.p2	AJ011734|Syngr4|58867|synaptogyrin 4	AK006050|Syngr4|58867|synaptogyrin 4	BC048469|Syngr4|58867|synaptogyrin 4	NM_021482|Syngr4|58867|synaptogyrin 4
mm9_v1_chr11_-_97605846_97606123	0.0594206	RUNX1..3.p2	AY050219|Pip4k2b|108083|phosphatidylinositol-5-phosphate 4-kinase, type II, beta	AK170392|Pip4k2b|108083|phosphatidylinositol-5-phosphate 4-kinase, type II, beta	AK037013|Pip4k2b|108083|phosphatidylinositol-5-phosphate 4-kinase, type II, beta	AK171497|Pip4k2b|108083|phosphatidylinositol-5-phosphate 4-kinase, type II, beta	AK089414|Pip4k2b|108083|phosphatidylinositol-5-phosphate 4-kinase, type II, beta	BC047282|Pip4k2b|108083|phosphatidylinositol-5-phosphate 4-kinase, type II, beta	NM_054051|Pip4k2b|108083|phosphatidylinositol-5-phosphate 4-kinase, type II, beta	AK146559|Pip4k2b|108083|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
mm9_v1_chr11_-_108205158_108205183	0.0594042	RUNX1..3.p2	X52684|Prkca|18750|protein kinase C, alpha	X52685|Prkca|18750|protein kinase C, alpha
mm9_v1_chr5_+_67067359_67067456	0.0593244	RUNX1..3.p2	NM_011670|Uchl1|22223|ubiquitin carboxy-terminal hydrolase L1
mm9_v1_chr18_-_34051179_34051292	0.0592001	RUNX1..3.p2	AK164281|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a
mm9_v1_chr10_-_80630518_80630667	0.0589565	RUNX1..3.p2	AK145367|Pias4|59004|protein inhibitor of activated STAT 4	AF109174|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr11_-_58304254_58304254	0.0589238	RUNX1..3.p2	NM_001011770|Olfr332|257932|olfactory receptor 332
mm9_v1_chr5_-_31210160_31210170	0.0588546	RUNX1..3.p2	NM_024460|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chrX_-_132602648_132602774	0.0586262	RUNX1..3.p2	AF097439|Bex2|12069|brain expressed X-linked 2	BC027529|Bex2|12069|brain expressed X-linked 2	AK132005|Bex2|12069|brain expressed X-linked 2	NM_009749|Bex2|12069|brain expressed X-linked 2
mm9_v1_chr9_-_65732822_65732840	0.0586215	RUNX1..3.p2	AF197574|Trip4|56404|thyroid hormone receptor interactor 4
mm9_v1_chr15_+_33012863_33012908	0.0583689	RUNX1..3.p2	NM_018755|Pgcp|54381|plasma glutamate carboxypeptidase	NM_176073|Pgcp|54381|plasma glutamate carboxypeptidase	AK135096|Pgcp|54381|plasma glutamate carboxypeptidase	BC010977|Pgcp|54381|plasma glutamate carboxypeptidase
mm9_v1_chr17_-_35164860_35164960	0.0583676	RUNX1..3.p2	AK019275|Ng23|78376|Ng23 protein	BC147772|Ng23|78376|Ng23 protein	BC147780|Ng23|78376|Ng23 protein	BC172157|Ng23|78376|Ng23 protein	NM_023893|Ng23|78376|Ng23 protein
mm9_v1_chr6_-_138371302_138371390	0.0583532	RUNX1..3.p2	BC057086|Lmo3|109593|LIM domain only 3
mm9_v1_chr15_+_76490272_76490340	0.0583126	RUNX1..3.p2	AK144304|Kifc2|16581|kinesin family member C2
mm9_v1_chr12_+_10397567_10397637	0.058114	RUNX1..3.p2	NM_023697|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	AF303831|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	BC092299|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	BC020094|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	AK014097|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)
mm9_v1_chr18_-_24280308_24280378	0.0580527	RUNX1..3.p2	BC056426|Ino80c|225280|INO80 complex subunit C	AK083718|Ino80c|225280|INO80 complex subunit C	NM_172625|Ino80c|225280|INO80 complex subunit C	AK077290|Ino80c|225280|INO80 complex subunit C	BC060961|Ino80c|225280|INO80 complex subunit C
mm9_v1_chr7_-_25084567_25084655	0.057917	RUNX1..3.p2	NM_009561|Zfp61|22719|zinc finger protein 61	BC006618|Zfp61|22719|zinc finger protein 61
mm9_v1_chr1_+_174242554_174242688	0.0578924	RUNX1..3.p2	AF439263|Igsf8|140559|immunoglobulin superfamily, member 8	AF411055|Igsf8|140559|immunoglobulin superfamily, member 8	AK213338|Igsf8|140559|immunoglobulin superfamily, member 8
mm9_v1_chr10_-_126626878_126627109	0.0578807	RUNX1..3.p2	AK158684|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	NM_001166413|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	AF487515|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	AK010452|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	BC041113|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25	NM_028027|Arhgef25|52666|Rho guanine nucleotide exchange factor (GEF) 25
mm9_v1_chr11_+_59319654_59319693	0.0577463	RUNX1..3.p2	AK011602|4933439C10Rik|74476|RIKEN cDNA 4933439C10 gene
mm9_v1_chr17_-_37095181_37095245	0.0577442	RUNX1..3.p2	AF230339|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr13_-_78338131_78338242	0.0576458	RUNX1..3.p2	BC108408|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	X74134|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	NM_010151|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1
mm9_v1_chr2_-_152655725_152655826	0.0576093	RUNX1..3.p2	U10100|Bcl2l1|12048|BCL2-like 1	U10101|Bcl2l1|12048|BCL2-like 1	X83574|Bcl2l1|12048|BCL2-like 1	BC089017|Bcl2l1|12048|BCL2-like 1	U51278|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr14_+_66915867_66915901	0.0574324	RUNX1..3.p2	BC145783|Trim35|66854|tripartite motif-containing 35	BC145809|Trim35|66854|tripartite motif-containing 35	AF145374|Trim35|66854|tripartite motif-containing 35	AK032635|Trim35|66854|tripartite motif-containing 35	AK075877|Trim35|66854|tripartite motif-containing 35
mm9_v1_chr7_+_53152425_53152567	0.0572644	RUNX1..3.p2	NM_144801|Tmem143|70209|transmembrane protein 143	BC017618|Tmem143|70209|transmembrane protein 143	AK035836|Tmem143|70209|transmembrane protein 143	AK010209|Tmem143|70209|transmembrane protein 143	AK171908|Tmem143|70209|transmembrane protein 143	AK087636|Tmem143|70209|transmembrane protein 143
mm9_v1_chrX_-_159267249_159267385	0.0571072	RUNX1..3.p2	AK162263|Txlng|353170|taxilin gamma	BC080778|Txlng|353170|taxilin gamma	AK161561|Txlng|353170|taxilin gamma	AK031783|Txlng|353170|taxilin gamma	BC059099|Txlng|353170|taxilin gamma	BC117898|Txlng|353170|taxilin gamma	BC117899|Txlng|353170|taxilin gamma	AK030100|Txlng|353170|taxilin gamma	NM_178935|Txlng|353170|taxilin gamma	AK078477|Txlng|353170|taxilin gamma	AK044130|Txlng|353170|taxilin gamma	DQ316984|Txlng|353170|taxilin gamma	DQ320011|Txlng|353170|taxilin gamma
mm9_v1_chr6_-_128476708_128476738	0.0570421	RUNX1..3.p2	M93264|Pzp|11287|pregnancy zone protein	NM_007376|Pzp|11287|pregnancy zone protein
mm9_v1_chr4_+_140566551_140566581	0.0570162	RUNX1..3.p2	NM_008546|Mfap2|17150|microfibrillar-associated protein 2	AK160213|Mfap2|17150|microfibrillar-associated protein 2
mm9_v1_chr8_+_13060907_13061026	0.057005	RUNX1..3.p2	AK008819|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	NM_025834|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	BC024104|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	BC038045|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	AK005011|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein
mm9_v1_chr4_-_147242501_147242654	0.0568404	RUNX1..3.p2	BC017525|Miip|28010|migration and invasion inhibitory protein	AK133976|Miip|28010|migration and invasion inhibitory protein	AK170224|Miip|28010|migration and invasion inhibitory protein	BC024069|Miip|28010|migration and invasion inhibitory protein
mm9_v1_chr7_+_133728451_133728464	0.056684	RUNX1..3.p2	AK156422|Apobr|171504|apolipoprotein B receptor
mm9_v1_chr1_-_84281018_84281160	0.0562151	RUNX1..3.p2	AK035542|Pid1|98496|phosphotyrosine interaction domain containing 1	AK083256|Pid1|98496|phosphotyrosine interaction domain containing 1	AK150971|Pid1|98496|phosphotyrosine interaction domain containing 1
mm9_v1_chr2_-_37298623_37298690	0.0559086	RUNX1..3.p2	BC109349|Zbtb26|320633|zinc finger and BTB domain containing 26	BC109350|Zbtb26|320633|zinc finger and BTB domain containing 26	AK044592|Zbtb26|320633|zinc finger and BTB domain containing 26	BC060655|Zbtb26|320633|zinc finger and BTB domain containing 26	NM_199025|Zbtb26|320633|zinc finger and BTB domain containing 26	AK166126|Zbtb26|320633|zinc finger and BTB domain containing 26
mm9_v1_chr19_-_41068625_41068698	0.0558169	RUNX1..3.p2	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr15_+_97622089_97622513	0.055706	RUNX1..3.p2	AK205354|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK197454|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK214110|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK177009|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK188489|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK186060|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK215813|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK190346|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK203730|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK186268|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1
mm9_v1_chr8_+_107800370_107800401	0.0554864	RUNX1..3.p2	BC053971|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AK021023|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm9_v1_chr3_-_90195440_90195485	0.055409	RUNX1..3.p2	
mm9_v1_chr11_-_51807636_51807676	0.0550907	RUNX1..3.p2	AK017280|5430406J06Rik|73848|RIKEN cDNA 5430406J06 gene
mm9_v1_chr2_+_128926721_128926816	0.0549801	RUNX1..3.p2	NM_009086|Polr1b|20017|polymerase (RNA) I polypeptide B	AK156712|Polr1b|20017|polymerase (RNA) I polypeptide B	AK144616|Polr1b|20017|polymerase (RNA) I polypeptide B	AK083732|Polr1b|20017|polymerase (RNA) I polypeptide B	AK052672|Polr1b|20017|polymerase (RNA) I polypeptide B	U58280|Polr1b|20017|polymerase (RNA) I polypeptide B	AK143501|Polr1b|20017|polymerase (RNA) I polypeptide B	BC060656|Polr1b|20017|polymerase (RNA) I polypeptide B
mm9_v1_chr1_+_154613763_154613962	0.0548887	RUNX1..3.p2	AK166335|Arpc5|67771|actin related protein 2/3 complex, subunit 5	BC060143|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166284|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166725|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166919|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK008097|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151656|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK152281|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK159738|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK011348|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK011911|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK017669|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK019149|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK150443|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK150703|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK153262|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK149756|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151654|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK168264|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK087427|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151490|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK159438|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK167916|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK168986|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK191774|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK181325|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK187022|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK189385|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK208127|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK209531|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chrX_-_48371127_48371236	0.0543883	RUNX1..3.p2	AK087971|Rap2c|72065|RAP2C, member of RAS oncogene family	BC050056|Rap2c|72065|RAP2C, member of RAS oncogene family	BC027363|Rap2c|72065|RAP2C, member of RAS oncogene family	AK146057|Rap2c|72065|RAP2C, member of RAS oncogene family	BC064814|Rap2c|72065|RAP2C, member of RAS oncogene family	BC094890|Rap2c|72065|RAP2C, member of RAS oncogene family	NM_172413|Rap2c|72065|RAP2C, member of RAS oncogene family	AK146956|Rap2c|72065|RAP2C, member of RAS oncogene family	AK147015|Rap2c|72065|RAP2C, member of RAS oncogene family
mm9_v1_chr2_+_181414995_181415018	0.0540991	RUNX1..3.p2	D86081|Tcea2|21400|transcription elongation factor A (SII), 2	NM_009326|Tcea2|21400|transcription elongation factor A (SII), 2	AK131650|Tcea2|21400|transcription elongation factor A (SII), 2
mm9_v1_chr4_+_123613778_123613862	0.0540226	RUNX1..3.p2	AK003876|Rragc|54170|Ras-related GTP binding C	AK196968|Rragc|54170|Ras-related GTP binding C	AK177349|Rragc|54170|Ras-related GTP binding C	AK196201|Rragc|54170|Ras-related GTP binding C	AK204008|Rragc|54170|Ras-related GTP binding C	AK213206|Rragc|54170|Ras-related GTP binding C
mm9_v1_chr10_-_80048413_80048422	0.0539759	RUNX1..3.p2	
mm9_v1_chr6_+_85401961_85402121	0.0538232	RUNX1..3.p2	AK168087|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK150160|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK169426|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK012201|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK167367|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK166888|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK146902|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK167938|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK167827|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK168272|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK077781|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	BC008255|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK184902|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK198665|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK203942|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)
mm9_v1_chrX_-_156560678_156560850	0.0536316	RUNX1..3.p2	AL355693|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1
mm9_v1_chr7_+_6124083_6124158	0.0536092	RUNX1..3.p2	BC023396|Zfp444|72667|zinc finger protein 444	AK169973|Zfp444|72667|zinc finger protein 444	AK018079|Zfp444|72667|zinc finger protein 444	NM_001146024|Zfp444|72667|zinc finger protein 444	NM_028316|Zfp444|72667|zinc finger protein 444	AK089886|Zfp444|72667|zinc finger protein 444	BC037180|Zfp444|72667|zinc finger protein 444	BC139359|Zfp444|72667|zinc finger protein 444	BC139361|Zfp444|72667|zinc finger protein 444
mm9_v1_chr2_-_90910332_90910406	0.0534578	RUNX1..3.p2	BC125525|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	BC137752|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	AK035296|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	NM_026721|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	BC020106|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	AK156951|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13
mm9_v1_chr6_+_18816317_18816373	0.0533521	RUNX1..3.p2	BC049731|Ankrd7|75196|ankyrin repeat domain 7	NM_001167757|Ankrd7|75196|ankyrin repeat domain 7	NM_029202|Ankrd7|75196|ankyrin repeat domain 7	AK077080|Ankrd7|75196|ankyrin repeat domain 7	AK015948|Ankrd7|75196|ankyrin repeat domain 7
mm9_v1_chr15_+_57526212_57526467	0.0533335	RUNX1..3.p2	NM_199449|Zhx2|387609|zinc fingers and homeoboxes 2	AK157631|Zhx2|387609|zinc fingers and homeoboxes 2	AK031782|Zhx2|387609|zinc fingers and homeoboxes 2	BC059178|Zhx2|387609|zinc fingers and homeoboxes 2
mm9_v1_chr2_-_164682380_164682513	0.0532077	RUNX1..3.p2	CT010317|Pltp|18830|phospholipid transfer protein	U28960|Pltp|18830|phospholipid transfer protein
mm9_v1_chr6_-_128380651_128380781	0.0531821	RUNX1..3.p2	
mm9_v1_chr5_-_118605455_118605474	0.0529973	RUNX1..3.p2	AK031815|Fbxw8|231672|F-box and WD-40 domain protein 8	AK053794|Fbxw8|231672|F-box and WD-40 domain protein 8	NM_172721|Fbxw8|231672|F-box and WD-40 domain protein 8	AK134291|Fbxw8|231672|F-box and WD-40 domain protein 8
mm9_v1_chr7_-_134351860_134352145	0.0527653	RUNX1..3.p2	AK047320|Tbc1d10b|68449|TBC1 domain family, member 10b	AK047327|Tbc1d10b|68449|TBC1 domain family, member 10b	NM_144522|Tbc1d10b|68449|TBC1 domain family, member 10b
mm9_v1_chr2_-_155755998_155756045	0.052733	RUNX1..3.p2	BC050884|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	BC057570|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK139488|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	NM_018888|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)
mm9_v1_chr7_-_139791248_139791319	0.0525704	RUNX1..3.p2	BC139757|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF222444|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF222445|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223361|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223362|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223363|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223674|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223675|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	NM_009123|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)
mm9_v1_chr6_+_88052091_88052141	0.0522929	RUNX1..3.p2	
mm9_v1_chr14_+_32481114_32481230	0.0522561	RUNX1..3.p2	AK189055|Btd|26363|biotinidase
mm9_v1_chr15_-_83295010_83295059	0.0522223	RUNX1..3.p2	NM_001159509|Pacsin2|23970|protein kinase C and casein kinase substrate in neurons 2
mm9_v1_chr8_-_47209499_47209499	0.0521253	RUNX1..3.p2	NM_207213|Snx25|102141|sorting nexin 25
mm9_v1_chr8_+_74120004_74120094	0.0518762	RUNX1..3.p2	
mm9_v1_chr3_-_51323311_51323452	0.0518423	RUNX1..3.p2	AK164869|Setd7|73251|SET domain containing (lysine methyltransferase) 7
mm9_v1_chr16_+_91648068_91648092	0.0516644	RUNX1..3.p2	NM_019973|Son|20658|Son DNA binding protein	NM_178880|Son|20658|Son DNA binding protein
mm9_v1_chr4_+_118867914_118868129	0.0512155	RUNX1..3.p2	NM_024462|Ccdc23|69216|coiled-coil domain containing 23	AK010418|Ccdc23|69216|coiled-coil domain containing 23	BC002274|Ccdc23|69216|coiled-coil domain containing 23	AK079783|Ccdc23|69216|coiled-coil domain containing 23	NM_001038998|Ccdc23|69216|coiled-coil domain containing 23
mm9_v1_chr13_+_13682653_13682668	0.0507928	RUNX1..3.p2	AK165585|Lyst|17101|lysosomal trafficking regulator
mm9_v1_chr10_-_80363606_80363713	0.0506916	RUNX1..3.p2	AF144702|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	NM_013895|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr7_-_118214192_118214323	0.0506299	RUNX1..3.p2	AK037763|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2
mm9_v1_chr7_-_139761710_139761754	0.0505817	RUNX1..3.p2	AK185243|Oat|18242|ornithine aminotransferase	AK185430|Oat|18242|ornithine aminotransferase
mm9_v1_chr7_+_28964486_28964515	0.0505723	RUNX1..3.p2	BC019545|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_001037957|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_010092|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	Y18280|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr8_-_108861850_108861887	0.0505121	RUNX1..3.p2	AK087515|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	AK076416|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	AK139226|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	AK019476|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	AK162894|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	BC043077|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral	NM_021491|Smpd3|58994|sphingomyelin phosphodiesterase 3, neutral
mm9_v1_chr2_-_25221101_25221190	0.0504473	RUNX1..3.p2	BC043307|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077912|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK151942|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	NM_001033293|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK149178|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK168977|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK159787|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077550|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	BC130030|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
mm9_v1_chr12_+_81793587_81793638	0.0504363	RUNX1..3.p2	NM_001177503|3830431G21Rik|217682|RIKEN cDNA 3830431G21 gene	AK028383|3830431G21Rik|217682|RIKEN cDNA 3830431G21 gene
mm9_v1_chr5_-_37187799_37187854	0.0504311	RUNX1..3.p2	BC085488|Mrfap1|67568|Morf4 family associated protein 1
mm9_v1_chr5_-_140289167_140289196	0.0503886	RUNX1..3.p2	AK148454|Tmem184a|231832|transmembrane protein 184a	NM_144914|Tmem184a|231832|transmembrane protein 184a
mm9_v1_chr5_-_54098762_54098942	0.0500655	RUNX1..3.p2	BC020534|Cckar|12425|cholecystokinin A receptor	AK143895|Cckar|12425|cholecystokinin A receptor	AK004730|Cckar|12425|cholecystokinin A receptor	AK146738|Cckar|12425|cholecystokinin A receptor	AK147052|Cckar|12425|cholecystokinin A receptor	NM_009827|Cckar|12425|cholecystokinin A receptor
mm9_v1_chr1_-_137180586_137180686	0.05001	RUNX1..3.p2	AK159445|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	AK031138|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	AK159195|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	AK159625|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	BC019200|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	BC010520|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	NM_001159624|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	NM_145417|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)	AK145466|Rnpep|215615|arginyl aminopeptidase (aminopeptidase B)
mm9_v1_chr6_-_119988624_119988681	0.0500091	RUNX1..3.p2	AK172935|Wnk1|232341|WNK lysine deficient protein kinase 1	BC055788|Wnk1|232341|WNK lysine deficient protein kinase 1	BC046916|Wnk1|232341|WNK lysine deficient protein kinase 1	AK133738|Wnk1|232341|WNK lysine deficient protein kinase 1	NM_001185020|Wnk1|232341|WNK lysine deficient protein kinase 1	NM_001185021|Wnk1|232341|WNK lysine deficient protein kinase 1	NM_198703|Wnk1|232341|WNK lysine deficient protein kinase 1
mm9_v1_chr17_+_27993426_27993458	0.0499536	RUNX1..3.p2	AK089790|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK144200|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK220293|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	NM_001080769|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1
mm9_v1_chr14_+_69789858_69790075	0.0498349	RUNX1..3.p2	AF045150|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC132558|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC139035|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AK006401|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	BC100425|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AF030113|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	AK007304|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)	NM_010920|Nkx2-6|18092|NK2 transcription factor related, locus 6 (Drosophila)
mm9_v1_chr9_-_61918412_61918412	0.0496686	RUNX1..3.p2	BC094587|Glce|93683|glucuronyl C5-epimerase	NM_033320|Glce|93683|glucuronyl C5-epimerase
mm9_v1_chr8_+_14090460_14090484	0.0494988	RUNX1..3.p2	AK134595|Gm10699|100038645|predicted gene 10699	AK163524|Gm10699|100038645|predicted gene 10699
mm9_v1_chr19_-_41289262_41289457	0.0494706	RUNX1..3.p2	AK008994|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK159802|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr2_-_152758906_152758943	0.0494212	RUNX1..3.p2	AK152669|Foxs1|14239|forkhead box S1	BC096604|Foxs1|14239|forkhead box S1	BC131937|Foxs1|14239|forkhead box S1	BC131939|Foxs1|14239|forkhead box S1	AK077935|Foxs1|14239|forkhead box S1	NM_010226|Foxs1|14239|forkhead box S1
mm9_v1_chr12_-_79944026_79944112	0.049354	RUNX1..3.p2	
mm9_v1_chr11_+_78059210_78059318	0.0493381	RUNX1..3.p2	BC058798|Sdf2|20316|stromal cell derived factor 2	NM_009143|Sdf2|20316|stromal cell derived factor 2
mm9_v1_chr1_-_136700389_136700428	0.0491489	RUNX1..3.p2	AK035285|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm9_v1_chr18_+_60685819_60685850	0.0488841	RUNX1..3.p2	AK016059|Dctn4|67665|dynactin 4	AK034292|Dctn4|67665|dynactin 4
mm9_v1_chr9_-_119066057_119066210	0.0488637	RUNX1..3.p2	AK160568|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B	BC019882|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B	AK145953|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B	AY273812|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B	NM_146230|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B
mm9_v1_chr1_-_34490108_34490136	0.048827	RUNX1..3.p2	
mm9_v1_chr6_+_100783598_100783865	0.0486927	RUNX1..3.p2	BC110429|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK082539|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	NM_182939|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK084169|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC112399|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC056340|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC098464|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2
mm9_v1_chr11_-_70468019_70468032	0.0485453	RUNX1..3.p2	X14425|Pfn1|18643|profilin 1
mm9_v1_chr4_-_142718290_142718420	0.0485071	RUNX1..3.p2	AK136099|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chrX_+_155897136_155897153	0.0484009	RUNX1..3.p2	AK005554|Mtap7d2|78283|MAP7 domain containing 2	AK030316|Mtap7d2|78283|MAP7 domain containing 2
mm9_v1_chr16_-_18413549_18413586	0.0482382	RUNX1..3.p2	NM_001111063|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr12_+_109661191_109661223	0.0482356	RUNX1..3.p2	BC053094|Eml1|68519|echinoderm microtubule associated protein like 1
mm9_v1_chr9_+_14589080_14589119	0.0479278	RUNX1..3.p2	U58987|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	U60318|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK168208|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK146234|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK146370|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK168180|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)
mm9_v1_chrX_+_34731239_34731452	0.047858	RUNX1..3.p2	AK146283|Rnf113a1|69942|ring finger protein 113A1	AK013178|Rnf113a1|69942|ring finger protein 113A1	BC024906|Rnf113a1|69942|ring finger protein 113A1	NM_153503|Rnf113a1|69942|ring finger protein 113A1
mm9_v1_chr4_+_45811944_45812018	0.0476244	RUNX1..3.p2	BC020001|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK150992|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK151349|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK151364|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK153416|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1	AK012213|Aldh1b1|72535|aldehyde dehydrogenase 1 family, member B1
mm9_v1_chr10_-_80204963_80204982	0.0476156	RUNX1..3.p2	BC053066|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit	AK155825|Ap3d1|11776|adaptor-related protein complex 3, delta 1 subunit
mm9_v1_chr11_+_5420920_5421028	0.0475953	RUNX1..3.p2	AF027963|Xbp1|22433|X-box binding protein 1	NM_013842|Xbp1|22433|X-box binding protein 1	AK007724|Xbp1|22433|X-box binding protein 1	AK145241|Xbp1|22433|X-box binding protein 1	BC029197|Xbp1|22433|X-box binding protein 1	BC008153|Xbp1|22433|X-box binding protein 1
mm9_v1_chr8_-_123606930_123607025	0.0475366	RUNX1..3.p2	AK087264|1110050K14Rik|68790|RIKEN cDNA 1110050K14 gene
mm9_v1_chr15_-_36538272_36538277	0.0475075	RUNX1..3.p2	
mm9_v1_chr4_+_48553291_48553370	0.0473198	RUNX1..3.p2	BC052696|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK013199|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_028137|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene
mm9_v1_chr19_-_4175478_4175577	0.0472875	RUNX1..3.p2	NM_134148|Carns1|107239|carnosine synthase 1
mm9_v1_chr7_+_28964518_28964559	0.0472621	RUNX1..3.p2	AK148342|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr9_+_43901941_43901990	0.0471544	RUNX1..3.p2	AK047204|Usp2|53376|ubiquitin specific peptidase 2	AK081112|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr11_-_68635236_68635451	0.0469088	RUNX1..3.p2	AK194070|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr3_+_69525922_69526018	0.0467082	RUNX1..3.p2	AK145248|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK088667|Nmd3|97112|NMD3 homolog (S. cerevisiae)	BC003842|Nmd3|97112|NMD3 homolog (S. cerevisiae)	NM_133787|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK198106|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK166283|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK143289|Nmd3|97112|NMD3 homolog (S. cerevisiae)
mm9_v1_chr13_+_97158340_97158355	0.0465796	RUNX1..3.p2	AK098149|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chrX_+_58962671_58962790	0.0465094	RUNX1..3.p2	AK137057|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	BC052689|Ldoc1|434784|leucine zipper, down-regulated in cancer 1	NM_001018087|Ldoc1|434784|leucine zipper, down-regulated in cancer 1
mm9_v1_chr18_-_16967100_16967238	0.0464606	RUNX1..3.p2	AB008811|Cdh2|12558|cadherin 2	M31131|Cdh2|12558|cadherin 2
mm9_v1_chr2_+_172266042_172266209	0.0463402	RUNX1..3.p2	AK053258|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK010321|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK077823|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	NM_025542|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK009901|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC049072|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK167287|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK028792|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC004803|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK219307|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK209674|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK169588|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK170141|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK153121|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC096692|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116442|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116443|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC127166|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene
mm9_v1_chr12_+_27154043_27154079	0.0463165	RUNX1..3.p2	BC048910|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	NM_020557|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
mm9_v1_chr13_-_38694739_38694840	0.0463091	RUNX1..3.p2	
mm9_v1_chr5_-_87355527_87355556	0.0462964	RUNX1..3.p2	BC027200|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	NM_152811|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK004971|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK050435|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1
mm9_v1_chr17_-_23981121_23981138	0.046139	RUNX1..3.p2	AK016509|Prss41|71003|protease, serine, 41	AB049453|Prss41|71003|protease, serine, 41	NM_027644|Prss41|71003|protease, serine, 41	AK049297|Prss41|71003|protease, serine, 41	BC145586|Prss41|71003|protease, serine, 41	BC150797|Prss41|71003|protease, serine, 41
mm9_v1_chr2_+_169458802_169458807	0.0461146	RUNX1..3.p2	BC079877|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr3_-_15332301_15332301	0.0460055	RUNX1..3.p2	DQ055452|Gm9733|751864|predicted gene 9733	NM_001076679|Gm9733|751864|predicted gene 9733
mm9_v1_chr9_-_99040505_99040647	0.0459314	RUNX1..3.p2	AK090116|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	BC039650|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	AK154106|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	NM_029094|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide
mm9_v1_chr6_+_83085799_83085880	0.045866	RUNX1..3.p2	NM_001136227|Rtkn|20166|rhotekin	AK164943|Rtkn|20166|rhotekin	AK076155|Rtkn|20166|rhotekin
mm9_v1_chr16_+_18777032_18777088	0.04573	RUNX1..3.p2	U82758|Cldn5|12741|claudin 5	AF087823|Cldn5|12741|claudin 5
mm9_v1_chr5_+_125343129_125343133	0.0456561	RUNX1..3.p2	AK035022|Zfp664|269704|zinc finger protein 664
mm9_v1_chr12_+_55963940_55963977	0.0451969	RUNX1..3.p2	AK006973|1700081N11Rik|73528|RIKEN cDNA 1700081N11 gene
mm9_v1_chr12_+_83717883_83718024	0.045027	RUNX1..3.p2	AK139323|Rgs6|50779|regulator of G-protein signaling 6	AK052527|Rgs6|50779|regulator of G-protein signaling 6	NM_015812|Rgs6|50779|regulator of G-protein signaling 6
mm9_v1_chr18_-_73975022_73975140	0.0449376	RUNX1..3.p2	BC004709|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	NM_145494|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK043103|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK171157|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK042289|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK039906|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK050933|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK050980|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK077746|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK156403|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK080403|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK162126|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial
mm9_v1_chr14_-_41998434_41998486	0.0448629	RUNX1..3.p2	BC012896|Sftpd|20390|surfactant associated protein D	BC003705|Sftpd|20390|surfactant associated protein D	NM_009160|Sftpd|20390|surfactant associated protein D
mm9_v1_chr14_+_56159102_56159102	0.0447276	RUNX1..3.p2	AK030501|Pck2|74551|phosphoenolpyruvate carboxykinase 2 (mitochondrial)	NM_028994|Pck2|74551|phosphoenolpyruvate carboxykinase 2 (mitochondrial)
mm9_v1_chr5_-_108304062_108304125	0.0447122	RUNX1..3.p2	AK165332|Evi5|14020|ecotropic viral integration site 5	BC030056|Evi5|14020|ecotropic viral integration site 5	NM_007964|Evi5|14020|ecotropic viral integration site 5	U53586|Evi5|14020|ecotropic viral integration site 5
mm9_v1_chr17_-_32326407_32326493	0.0446758	RUNX1..3.p2	AK132483|Ephx3|71932|epoxide hydrolase 3	NM_001033163|Ephx3|71932|epoxide hydrolase 3	AK010021|Ephx3|71932|epoxide hydrolase 3	BC145797|Ephx3|71932|epoxide hydrolase 3
mm9_v1_chr1_+_137695997_137696087	0.044627	RUNX1..3.p2	AJ242874|Tnni1|21952|troponin I, skeletal, slow 1	NM_021467|Tnni1|21952|troponin I, skeletal, slow 1	AK012258|Tnni1|21952|troponin I, skeletal, slow 1	NM_001112702|Tnni1|21952|troponin I, skeletal, slow 1
mm9_v1_chr16_+_16983690_16983704	0.0446182	RUNX1..3.p2	X58712|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr4_-_104782337_104782438	0.0445213	RUNX1..3.p2	AK044030|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	AK134573|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm9_v1_chr16_-_57754816_57754849	0.0444149	RUNX1..3.p2	BC011061|Col8a1|12837|collagen, type VIII, alpha 1	BC058281|Col8a1|12837|collagen, type VIII, alpha 1	AK159542|Col8a1|12837|collagen, type VIII, alpha 1	AK029203|Col8a1|12837|collagen, type VIII, alpha 1	AK018742|Col8a1|12837|collagen, type VIII, alpha 1	AK032048|Col8a1|12837|collagen, type VIII, alpha 1	AK046370|Col8a1|12837|collagen, type VIII, alpha 1	NM_007739|Col8a1|12837|collagen, type VIII, alpha 1
mm9_v1_chr17_+_12571455_12571482	0.0443965	RUNX1..3.p2	BC014773|Plg|18815|plasminogen	NM_008877|Plg|18815|plasminogen
mm9_v1_chrX_+_9829439_9829558	0.0443792	RUNX1..3.p2	AK050930|Otc|18416|ornithine transcarbamylase	NM_008769|Otc|18416|ornithine transcarbamylase	BC024893|Otc|18416|ornithine transcarbamylase	M17030|Otc|18416|ornithine transcarbamylase
mm9_v1_chr6_+_48546533_48546670	0.0443013	RUNX1..3.p2	AK204545|Repin1|58887|replication initiator 1
mm9_v1_chr7_+_135047561_135047646	0.0442881	RUNX1..3.p2	NM_009739|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150607|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150723|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK167519|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK145479|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	BC046595|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr11_+_75345598_75345772	0.044282	RUNX1..3.p2	AK171104|Slc43a2|215113|solute carrier family 43, member 2	AK172685|Slc43a2|215113|solute carrier family 43, member 2	AK159144|Slc43a2|215113|solute carrier family 43, member 2	AK165721|Slc43a2|215113|solute carrier family 43, member 2	AK090207|Slc43a2|215113|solute carrier family 43, member 2	AK143773|Slc43a2|215113|solute carrier family 43, member 2
mm9_v1_chr3_+_51299153_51299205	0.0438388	RUNX1..3.p2	
mm9_v1_chr8_-_73121418_73121547	0.0436748	RUNX1..3.p2	
mm9_v1_chr17_+_56219032_56219219	0.043631	RUNX1..3.p2	AK144669|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	AK143616|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	D63850|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	NM_008233|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	AK146918|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	AK146813|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	BC003741|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	FN687734|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2
mm9_v1_chr2_-_38921036_38921066	0.0433076	RUNX1..3.p2	BC080733|Golga1|76899|golgi autoantigen, golgin subfamily a, 1
mm9_v1_chr2_+_24132788_24133018	0.0431393	RUNX1..3.p2	AK008977|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK009741|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK076547|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_019451|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK010020|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF200495|Il1f5|54450|interleukin 1 family, member 5 (delta)	AJ250429|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132600|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132602|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF230378|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr11_-_102331042_102331196	0.0431104	RUNX1..3.p2	AK158443|Itga2b|16399|integrin alpha 2b	BC120493|Itga2b|16399|integrin alpha 2b	BC137570|Itga2b|16399|integrin alpha 2b	AK157012|Itga2b|16399|integrin alpha 2b	AF166384|Itga2b|16399|integrin alpha 2b	AF170316|Itga2b|16399|integrin alpha 2b	AK142289|Itga2b|16399|integrin alpha 2b	AK156872|Itga2b|16399|integrin alpha 2b	AK154619|Itga2b|16399|integrin alpha 2b	NM_010575|Itga2b|16399|integrin alpha 2b
mm9_v1_chr8_+_62984911_62984927	0.042986	RUNX1..3.p2	AK075578|Aadat|23923|aminoadipate aminotransferase	AF072376|Aadat|23923|aminoadipate aminotransferase	NM_011834|Aadat|23923|aminoadipate aminotransferase	BC012637|Aadat|23923|aminoadipate aminotransferase
mm9_v1_chr7_+_139897549_139897592	0.0429484	RUNX1..3.p2	
mm9_v1_chr12_-_56403648_56403785	0.0429461	RUNX1..3.p2	AK017550|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK013403|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138295|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138296|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AJ238247|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK087572|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK015746|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK040589|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK088240|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028254|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chrX_+_136335346_136335366	0.0428517	RUNX1..3.p2	NM_016675|Cldn2|12738|claudin 2	BC085494|Cldn2|12738|claudin 2
mm9_v1_chr13_+_96466807_96466919	0.0427901	RUNX1..3.p2	AK135212|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2	NM_010170|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2	U92972|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2	AK089444|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2	BC140985|F2rl2|14064|coagulation factor II (thrombin) receptor-like 2
mm9_v1_chr15_-_76490490_76490546	0.0427529	RUNX1..3.p2	AJ251516|Cyhr1|54151|cysteine and histidine rich 1	NM_019396|Cyhr1|54151|cysteine and histidine rich 1	BC016196|Cyhr1|54151|cysteine and histidine rich 1	BC025112|Cyhr1|54151|cysteine and histidine rich 1	NM_180962|Cyhr1|54151|cysteine and histidine rich 1	AK004009|Cyhr1|54151|cysteine and histidine rich 1
mm9_v1_chr9_-_21314605_21314677	0.0426004	RUNX1..3.p2	U41805|Tmed1|17083|transmembrane emp24 domain containing 1	BC006715|Tmed1|17083|transmembrane emp24 domain containing 1	AK133513|Tmed1|17083|transmembrane emp24 domain containing 1	AK166092|Tmed1|17083|transmembrane emp24 domain containing 1	NM_010744|Tmed1|17083|transmembrane emp24 domain containing 1	AK160525|Tmed1|17083|transmembrane emp24 domain containing 1	BC016568|Tmed1|17083|transmembrane emp24 domain containing 1	BC138499|Tmed1|17083|transmembrane emp24 domain containing 1	BC138498|Tmed1|17083|transmembrane emp24 domain containing 1	BC145298|Tmed1|17083|transmembrane emp24 domain containing 1
mm9_v1_chr2_+_169459145_169459258	0.0425846	RUNX1..3.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr14_+_119537486_119537562	0.0423767	RUNX1..3.p2	NM_015820|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3	AB024567|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3	BC117529|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3	BC118035|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3
mm9_v1_chr12_+_110693193_110693229	0.0423533	RUNX1..3.p2	EU434914|Dlk1|13386|delta-like 1 homolog (Drosophila)	EU434916|Dlk1|13386|delta-like 1 homolog (Drosophila)
mm9_v1_chr5_-_148133915_148134021	0.0423102	RUNX1..3.p2	DQ225767|Prhoxnb|231903|parahox cluster neighbor	BC147779|Prhoxnb|231903|parahox cluster neighbor	BC147790|Prhoxnb|231903|parahox cluster neighbor	NM_001039678|Prhoxnb|231903|parahox cluster neighbor
mm9_v1_chr4_-_129255652_129255823	0.0422535	RUNX1..3.p2	AK134621|Fam167b|230766|family with sequence similarity 167, member B	BC030183|Fam167b|230766|family with sequence similarity 167, member B	AK143928|Fam167b|230766|family with sequence similarity 167, member B	NM_182783|Fam167b|230766|family with sequence similarity 167, member B
mm9_v1_chr8_-_90483124_90483239	0.0421215	RUNX1..3.p2	BC079586|Zfp423|94187|zinc finger protein 423	BC139028|Zfp423|94187|zinc finger protein 423	BC139030|Zfp423|94187|zinc finger protein 423
mm9_v1_chr9_+_108398659_108398678	0.0421004	RUNX1..3.p2	AK183398|Usp19|71472|ubiquitin specific peptidase 19	AK211145|Usp19|71472|ubiquitin specific peptidase 19
mm9_v1_chr14_-_57719048_57719093	0.0419137	RUNX1..3.p2	AK178984|Gjb2|14619|gap junction protein, beta 2	AK189228|Gjb2|14619|gap junction protein, beta 2
mm9_v1_chr7_-_89079335_89079355	0.0418986	RUNX1..3.p2	AK045542|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	NM_013886|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr19_-_7473566_7473625	0.0418824	RUNX1..3.p2	
mm9_v1_chr8_-_83404256_83404269	0.0418531	RUNX1..3.p2	
mm9_v1_chr19_+_5474686_5474769	0.0417163	RUNX1..3.p2	NM_021474|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	AK075585|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	NM_001164352|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2	AF109122|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm9_v1_chr6_+_146673451_146673548	0.0416973	RUNX1..3.p2	NM_172734|Stk38l|232533|serine/threonine kinase 38 like	AK052288|Stk38l|232533|serine/threonine kinase 38 like	AK045971|Stk38l|232533|serine/threonine kinase 38 like	AY223819|Stk38l|232533|serine/threonine kinase 38 like
mm9_v1_chr12_-_82695944_82695966	0.0416933	RUNX1..3.p2	BC013096|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	NM_027213|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK171784|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr2_-_126501173_126501305	0.0416845	RUNX1..3.p2	AY282801|Gabpb1|14391|GA repeat binding protein, beta 1	AY282804|Gabpb1|14391|GA repeat binding protein, beta 1	AK146373|Gabpb1|14391|GA repeat binding protein, beta 1	M74517|Gabpb1|14391|GA repeat binding protein, beta 1	NM_010249|Gabpb1|14391|GA repeat binding protein, beta 1	M74516|Gabpb1|14391|GA repeat binding protein, beta 1	NM_207669|Gabpb1|14391|GA repeat binding protein, beta 1	AK140907|Gabpb1|14391|GA repeat binding protein, beta 1	AK140222|Gabpb1|14391|GA repeat binding protein, beta 1	AK052828|Gabpb1|14391|GA repeat binding protein, beta 1
mm9_v1_chr17_-_24781872_24781901	0.0416641	RUNX1..3.p2	BC065778|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK002557|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_023449|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm9_v1_chrX_+_109424956_109425024	0.0413563	RUNX1..3.p2	AK028953|Apool|68117|apolipoprotein O-like	AK079141|Apool|68117|apolipoprotein O-like	AK012398|Apool|68117|apolipoprotein O-like	AK012804|Apool|68117|apolipoprotein O-like	AK020156|Apool|68117|apolipoprotein O-like	AK088869|Apool|68117|apolipoprotein O-like	AK086522|Apool|68117|apolipoprotein O-like	BC024334|Apool|68117|apolipoprotein O-like	NM_026565|Apool|68117|apolipoprotein O-like
mm9_v1_chr7_+_30955159_30955213	0.0412001	RUNX1..3.p2	AK142560|Gm5113|330503|predicted gene 5113
mm9_v1_chr2_-_60801248_60801283	0.0411275	RUNX1..3.p2	BC016501|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK147109|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	NM_020296|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr7_+_74792295_74792398	0.0410842	RUNX1..3.p2	AK086049|Ttc23|67009|tetratricopeptide repeat domain 23	AK165626|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168475|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168476|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168477|Ttc23|67009|tetratricopeptide repeat domain 23	NM_025905|Ttc23|67009|tetratricopeptide repeat domain 23	AK141754|Ttc23|67009|tetratricopeptide repeat domain 23	BC038179|Ttc23|67009|tetratricopeptide repeat domain 23	AK005431|Ttc23|67009|tetratricopeptide repeat domain 23	AK084269|Ttc23|67009|tetratricopeptide repeat domain 23	AK166555|Ttc23|67009|tetratricopeptide repeat domain 23	AK166613|Ttc23|67009|tetratricopeptide repeat domain 23
mm9_v1_chr1_+_154613692_154613762	0.0409601	RUNX1..3.p2	AK159407|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK017985|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr9_+_66006060_66006077	0.0409478	RUNX1..3.p2	AK004350|Dapk2|13143|death-associated protein kinase 2	BC022165|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr11_-_84632935_84633016	0.0406692	RUNX1..3.p2	AK156416|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	AK041034|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	AK164059|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	AK163986|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	BC005625|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)	NM_145433|Mrm1|217038|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr12_+_113917038_113917088	0.0405205	RUNX1..3.p2	BC046387|Zbtb42|382639|zinc finger and BTB domain containing 42	NM_001100460|Zbtb42|382639|zinc finger and BTB domain containing 42
mm9_v1_chr9_+_107982741_107982829	0.0404808	RUNX1..3.p2	NM_008243|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	BC010551|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	AK040934|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	AK134222|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	BC051393|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	AK144824|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)	M74181|Mst1|15235|macrophage stimulating 1 (hepatocyte growth factor-like)
mm9_v1_chr1_+_90303576_90303673	0.0404495	RUNX1..3.p2	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr15_-_102062331_102062365	0.0404244	RUNX1..3.p2	AK155207|Itgb7|16421|integrin beta 7	AK155594|Itgb7|16421|integrin beta 7	AK144773|Itgb7|16421|integrin beta 7	BC011184|Itgb7|16421|integrin beta 7	AK078871|Itgb7|16421|integrin beta 7	AK154766|Itgb7|16421|integrin beta 7	NM_013566|Itgb7|16421|integrin beta 7
mm9_v1_chr4_-_115726466_115726490	0.0402193	RUNX1..3.p2	AK012994|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4	NM_028142|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chr16_+_96422285_96422310	0.0401856	RUNX1..3.p2	AJ239082|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein
mm9_v1_chr19_-_24105498_24105512	0.0400414	RUNX1..3.p2	NM_001114174|Fam189a2|381217|family with sequence similarity 189, member A2
mm9_v1_chr1_+_168309525_168309532	0.0399745	RUNX1..3.p2	AK013599|Tada1|27878|transcriptional adaptor 1
mm9_v1_chr2_+_32251776_32251794	0.0398923	RUNX1..3.p2	BC004846|Ptges2|96979|prostaglandin E synthase 2	AK050616|Ptges2|96979|prostaglandin E synthase 2	AK002798|Ptges2|96979|prostaglandin E synthase 2
mm9_v1_chr5_+_104864146_104864160	0.0398132	RUNX1..3.p2	BC020355|Spp1|20750|secreted phosphoprotein 1	BC029991|Spp1|20750|secreted phosphoprotein 1	BC057858|Spp1|20750|secreted phosphoprotein 1	BC002113|Spp1|20750|secreted phosphoprotein 1	BC080720|Spp1|20750|secreted phosphoprotein 1	J04806|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr7_-_126327887_126327961	0.0396989	RUNX1..3.p2	AB196532|Gpr139|209776|G protein-coupled receptor 139	AY485344|Gpr139|209776|G protein-coupled receptor 139	NM_001024138|Gpr139|209776|G protein-coupled receptor 139	BC125496|Gpr139|209776|G protein-coupled receptor 139	BC125498|Gpr139|209776|G protein-coupled receptor 139
mm9_v1_chrX_-_16896428_16896493	0.0396241	RUNX1..3.p2	BC120659|Efhc2|74405|EF-hand domain (C-terminal) containing 2	BC125625|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK016714|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK029501|Efhc2|74405|EF-hand domain (C-terminal) containing 2	NM_028916|Efhc2|74405|EF-hand domain (C-terminal) containing 2
mm9_v1_chr8_-_42127124_42127219	0.039294	RUNX1..3.p2	AF173380|Mtus1|102103|mitochondrial tumor suppressor 1	AF493235|Mtus1|102103|mitochondrial tumor suppressor 1	AK031693|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr2_-_126501326_126501329	0.0392546	RUNX1..3.p2	AK040722|Gabpb1|14391|GA repeat binding protein, beta 1
mm9_v1_chr9_-_13631482_13631562	0.0391381	RUNX1..3.p2	BC056968|Cep57|74360|centrosomal protein 57	AY251192|Cep57|74360|centrosomal protein 57	AK014873|Cep57|74360|centrosomal protein 57	BC030353|Cep57|74360|centrosomal protein 57	AK129053|Cep57|74360|centrosomal protein 57	NM_026665|Cep57|74360|centrosomal protein 57
mm9_v1_chr12_+_109873955_109874030	0.0390688	RUNX1..3.p2	AK151633|Evl|14026|Ena-vasodilator stimulated phosphoprotein	NM_001163396|Evl|14026|Ena-vasodilator stimulated phosphoprotein	AK137823|Evl|14026|Ena-vasodilator stimulated phosphoprotein
mm9_v1_chr4_+_135728188_135728308	0.0388837	RUNX1..3.p2	AK087452|E2f2|242705|E2F transcription factor 2	NM_177733|E2f2|242705|E2F transcription factor 2
mm9_v1_chr17_-_29144679_29144968	0.0388663	RUNX1..3.p2	AK184259|Stk38|106504|serine/threonine kinase 38	AY292399|Stk38|106504|serine/threonine kinase 38	AK020024|Stk38|106504|serine/threonine kinase 38	AK133644|Stk38|106504|serine/threonine kinase 38	AK164081|Stk38|106504|serine/threonine kinase 38	AK084433|Stk38|106504|serine/threonine kinase 38	BC009658|Stk38|106504|serine/threonine kinase 38	NM_134115|Stk38|106504|serine/threonine kinase 38	AK035731|Stk38|106504|serine/threonine kinase 38	AK080179|Stk38|106504|serine/threonine kinase 38
mm9_v1_chr1_+_75447084_75447084	0.0388267	RUNX1..3.p2	NM_183022|Accn4|241118|amiloride-sensitive cation channel 4, pituitary
mm9_v1_chr4_-_149148173_149148404	0.0386633	RUNX1..3.p2	AK017628|Slc25a33|70556|solute carrier family 25, member 33	BC011293|Slc25a33|70556|solute carrier family 25, member 33	AK157423|Slc25a33|70556|solute carrier family 25, member 33	NM_027460|Slc25a33|70556|solute carrier family 25, member 33
mm9_v1_chr6_-_56747675_56747806	0.0385196	RUNX1..3.p2	AK129374|Kbtbd2|210973|kelch repeat and BTB (POZ) domain containing 2	AK028396|Kbtbd2|210973|kelch repeat and BTB (POZ) domain containing 2	NM_145958|Kbtbd2|210973|kelch repeat and BTB (POZ) domain containing 2
mm9_v1_chr3_+_102877936_102877949	0.0385113	RUNX1..3.p2	NM_001033303|Ampd1|229665|adenosine monophosphate deaminase 1	AK137549|Ampd1|229665|adenosine monophosphate deaminase 1	AK132524|Ampd1|229665|adenosine monophosphate deaminase 1
mm9_v1_chr17_+_34400152_34400289	0.0384302	RUNX1..3.p2	NM_207105|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK077436|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC008168|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK170370|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171211|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK155573|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171281|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK172409|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK156899|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171005|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171290|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171298|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC010322|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC057998|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M15848|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065913|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119251|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119252|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AY452202|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13537|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13538|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13539|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13540|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M66213|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065912|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13541|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1
mm9_v1_chr5_+_150076605_150076688	0.0384218	RUNX1..3.p2	AK004002|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	BC026209|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	NM_009663|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	AK075967|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	M96554|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein
mm9_v1_chr6_-_142271469_142271500	0.0384118	RUNX1..3.p2	AF240694|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	NM_130861|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	AK029706|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5
mm9_v1_chr17_+_21092817_21092910	0.0383997	RUNX1..3.p2	AK190426|Ppp2r1a|51792|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
mm9_v1_chr17_+_29497858_29498034	0.0383892	RUNX1..3.p2	AK042260|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	NM_001159538|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	NM_013710|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	AK156151|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	AF017368|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	DQ344523|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2
mm9_v1_chr19_+_9028319_9028429	0.0383416	RUNX1..3.p2	AK044659|Tut1|70044|terminal uridylyl transferase 1, U6 snRNA-specific	BC025499|Tut1|70044|terminal uridylyl transferase 1, U6 snRNA-specific	NM_197993|Tut1|70044|terminal uridylyl transferase 1, U6 snRNA-specific	BC023900|Tut1|70044|terminal uridylyl transferase 1, U6 snRNA-specific	AK138418|Tut1|70044|terminal uridylyl transferase 1, U6 snRNA-specific
mm9_v1_chr9_-_14304843_14304925	0.0383294	RUNX1..3.p2	AK155227|Kdm4d|244694|lysine (K)-specific demethylase 4D	AK030020|Kdm4d|244694|lysine (K)-specific demethylase 4D	NM_173433|Kdm4d|244694|lysine (K)-specific demethylase 4D
mm9_v1_chr10_-_121063210_121063281	0.0382215	RUNX1..3.p2	
mm9_v1_chr13_-_101514515_101514615	0.0378154	RUNX1..3.p2	AK003111|Mrps36|66128|mitochondrial ribosomal protein S36	AK009966|Mrps36|66128|mitochondrial ribosomal protein S36	BC028499|Mrps36|66128|mitochondrial ribosomal protein S36	BC096576|Mrps36|66128|mitochondrial ribosomal protein S36	AK007512|Mrps36|66128|mitochondrial ribosomal protein S36	AK003765|Mrps36|66128|mitochondrial ribosomal protein S36	AK009050|Mrps36|66128|mitochondrial ribosomal protein S36	NM_001190264|Mrps36|66128|mitochondrial ribosomal protein S36	NM_025369|Mrps36|66128|mitochondrial ribosomal protein S36
mm9_v1_chr11_-_102017662_102017746	0.0377179	RUNX1..3.p2	AK012106|Tmem101|76547|transmembrane protein 101	AK041154|Tmem101|76547|transmembrane protein 101	BC011109|Tmem101|76547|transmembrane protein 101	AK049378|Tmem101|76547|transmembrane protein 101	AK140260|Tmem101|76547|transmembrane protein 101	NM_029649|Tmem101|76547|transmembrane protein 101
mm9_v1_chr17_-_13153182_13153211	0.037646	RUNX1..3.p2	AK013275|Acat2|110460|acetyl-Coenzyme A acetyltransferase 2
mm9_v1_chr8_+_38056628_38056675	0.0376423	RUNX1..3.p2	NM_001039220|AI429214|621080|expressed sequence AI429214	AK161334|AI429214|621080|expressed sequence AI429214	AK132736|AI429214|621080|expressed sequence AI429214	BC150875|AI429214|621080|expressed sequence AI429214
mm9_v1_chr18_+_24796993_24796998	0.0375488	RUNX1..3.p2	AK213520|Elp2|58523|elongation protein 2 homolog (S. cerevisiae)
mm9_v1_chr9_-_107775011_107775029	0.0375314	RUNX1..3.p2	AK220446|Rbm6|19654|RNA binding motif protein 6	AJ006486|Rbm6|19654|RNA binding motif protein 6	BC026130|Rbm6|19654|RNA binding motif protein 6
mm9_v1_chr9_+_107809219_107809237	0.03749	RUNX1..3.p2	NM_009074|Mst1r|19882|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	X74736|Mst1r|19882|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	AK053655|Mst1r|19882|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)
mm9_v1_chr8_-_25686797_25686823	0.037437	RUNX1..3.p2	BC026393|Ido2|209176|indoleamine 2,3-dioxygenase 2	EF137182|Ido2|209176|indoleamine 2,3-dioxygenase 2	NM_145949|Ido2|209176|indoleamine 2,3-dioxygenase 2
mm9_v1_chrX_-_7769960_7770036	0.0372512	RUNX1..3.p2	AK008113|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	AK027977|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	X97755|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	BC004620|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	AK012266|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein
mm9_v1_chr6_+_94450307_94450362	0.0370003	RUNX1..3.p2	NM_026255|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	AK015299|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	AK015954|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC037142|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC019156|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC049899|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
mm9_v1_chr2_-_84314191_84314337	0.0369568	RUNX1..3.p2	AK167522|Tfpi|21788|tissue factor pathway inhibitor	AK028356|Tfpi|21788|tissue factor pathway inhibitor	NM_011576|Tfpi|21788|tissue factor pathway inhibitor
mm9_v1_chr18_+_45719732_45719807	0.0369082	RUNX1..3.p2	AY123778|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	BC125475|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	BC137656|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AF357240|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AF533008|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AY280964|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	EU478850|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	NM_080465|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
mm9_v1_chr7_-_49948087_49948135	0.036851	RUNX1..3.p2	BC068175|Gm5595|434179|predicted gene 5595	NM_001008427|Gm5595|434179|predicted gene 5595
mm9_v1_chr5_-_92391867_92391880	0.0368009	RUNX1..3.p2	BC023138|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AK078397|Rchy1|68098|ring finger and CHY zinc finger domain containing 1
mm9_v1_chr2_-_114000981_114001027	0.0365609	RUNX1..3.p2	AK138700|Aqr|11834|aquarius	AK082873|Aqr|11834|aquarius
mm9_v1_chrX_-_71156567_71156646	0.0365303	RUNX1..3.p2	AF443826|Arhgap4|171207|Rho GTPase activating protein 4	BC109001|Arhgap4|171207|Rho GTPase activating protein 4	BC109002|Arhgap4|171207|Rho GTPase activating protein 4	AY183124|Arhgap4|171207|Rho GTPase activating protein 4	AY183125|Arhgap4|171207|Rho GTPase activating protein 4	AY183126|Arhgap4|171207|Rho GTPase activating protein 4	AY183127|Arhgap4|171207|Rho GTPase activating protein 4	AY183128|Arhgap4|171207|Rho GTPase activating protein 4	AY183129|Arhgap4|171207|Rho GTPase activating protein 4	AY183130|Arhgap4|171207|Rho GTPase activating protein 4	AY183131|Arhgap4|171207|Rho GTPase activating protein 4	AY183132|Arhgap4|171207|Rho GTPase activating protein 4	AY183133|Arhgap4|171207|Rho GTPase activating protein 4	AK157294|Arhgap4|171207|Rho GTPase activating protein 4	AK169865|Arhgap4|171207|Rho GTPase activating protein 4	AK037344|Arhgap4|171207|Rho GTPase activating protein 4	NM_001162423|Arhgap4|171207|Rho GTPase activating protein 4	NM_001162424|Arhgap4|171207|Rho GTPase activating protein 4	NM_138630|Arhgap4|171207|Rho GTPase activating protein 4
mm9_v1_chr19_+_40734282_40734322	0.0365153	RUNX1..3.p2	AK030601|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	NM_009848|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	BC011278|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	AF037366|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1
mm9_v1_chr2_-_167065954_167066027	0.0364184	RUNX1..3.p2	AB001607|Ptgis|19223|prostaglandin I2 (prostacyclin) synthase	AK036723|Ptgis|19223|prostaglandin I2 (prostacyclin) synthase
mm9_v1_chr2_+_154374639_154374777	0.0363952	RUNX1..3.p2	AK005633|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	DQ080431|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	NM_029305|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	BC147532|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	BC147533|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	BC039797|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene
mm9_v1_chr14_-_21552866_21552879	0.0363061	RUNX1..3.p2	AK202625|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
mm9_v1_chr5_+_124566251_124566301	0.036222	RUNX1..3.p2	AK133934|Arl6ip4|65105|ADP-ribosylation factor-like 6 interacting protein 4
mm9_v1_chr19_+_56536126_56536129	0.036071	RUNX1..3.p2	NM_001164263|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	NM_172641|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK036908|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK053921|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene
mm9_v1_chr17_+_28883912_28883997	0.0359954	RUNX1..3.p2	AK177608|Mapk14|26416|mitogen-activated protein kinase 14
mm9_v1_chr4_-_45333366_45333502	0.0359076	RUNX1..3.p2	AK006281|Exosc3|66362|exosome component 3	BC023669|Exosc3|66362|exosome component 3	BC054085|Exosc3|66362|exosome component 3	NM_025513|Exosc3|66362|exosome component 3	AK012689|Exosc3|66362|exosome component 3
mm9_v1_chr15_+_84962507_84962603	0.0358921	RUNX1..3.p2	AK017028|Ribc2|67747|RIB43A domain with coiled-coils 2	AK016311|Ribc2|67747|RIB43A domain with coiled-coils 2	NM_026357|Ribc2|67747|RIB43A domain with coiled-coils 2	AK006801|Ribc2|67747|RIB43A domain with coiled-coils 2	BC112373|Ribc2|67747|RIB43A domain with coiled-coils 2
mm9_v1_chr14_+_63752151_63752250	0.0358453	RUNX1..3.p2	M14222|Ctsb|13030|cathepsin B	AK190209|Ctsb|13030|cathepsin B	AK190539|Ctsb|13030|cathepsin B	AK191055|Ctsb|13030|cathepsin B	AK191391|Ctsb|13030|cathepsin B	AK196955|Ctsb|13030|cathepsin B	AK198213|Ctsb|13030|cathepsin B	AK199268|Ctsb|13030|cathepsin B	AK201893|Ctsb|13030|cathepsin B	AK202291|Ctsb|13030|cathepsin B	AK203639|Ctsb|13030|cathepsin B
mm9_v1_chr2_+_104657018_104657084	0.0356594	RUNX1..3.p2	AK009882|2310047K21Rik|71928|RIKEN cDNA 2310047K21 gene
mm9_v1_chr19_-_33466561_33466800	0.0355996	RUNX1..3.p2	DQ788834|Rnls|67795|renalase, FAD-dependent amine oxidase	BC052355|Rnls|67795|renalase, FAD-dependent amine oxidase	AK014866|Rnls|67795|renalase, FAD-dependent amine oxidase	AK018322|Rnls|67795|renalase, FAD-dependent amine oxidase	AK170321|Rnls|67795|renalase, FAD-dependent amine oxidase	NM_001146342|Rnls|67795|renalase, FAD-dependent amine oxidase	NM_001167818|Rnls|67795|renalase, FAD-dependent amine oxidase
mm9_v1_chr8_+_72758454_72758471	0.0355184	RUNX1..3.p2	BC057305|Sugp2|234373|SURP and G patch domain containing 2
mm9_v1_chr8_+_27268640_27268693	0.0353671	RUNX1..3.p2	NM_199042|Thap1|73754|THAP domain containing, apoptosis associated protein 1	BC038639|Thap1|73754|THAP domain containing, apoptosis associated protein 1
mm9_v1_chr16_+_4940800_4940851	0.0353566	RUNX1..3.p2	
mm9_v1_chr7_-_15023845_15023901	0.0352873	RUNX1..3.p2	BC031851|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene	AK050422|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene
mm9_v1_chrX_-_108810630_108810687	0.0350952	RUNX1..3.p2	BC116300|Hdx|245596|highly divergent homeobox	BC116301|Hdx|245596|highly divergent homeobox	AK083436|Hdx|245596|highly divergent homeobox	NM_001080549|Hdx|245596|highly divergent homeobox
mm9_v1_chr2_-_73323746_73323842	0.0350473	RUNX1..3.p2	AK031046|Wipf1|215280|WAS/WASL interacting protein family, member 1
mm9_v1_chr2_+_101518568_101518743	0.0349939	RUNX1..3.p2	AK041172|Traf6|22034|TNF receptor-associated factor 6	BC060705|Traf6|22034|TNF receptor-associated factor 6	NM_009424|Traf6|22034|TNF receptor-associated factor 6	AK155434|Traf6|22034|TNF receptor-associated factor 6	AK009110|Traf6|22034|TNF receptor-associated factor 6	D84655|Traf6|22034|TNF receptor-associated factor 6
mm9_v1_chr17_+_35278797_35278838	0.0347174	RUNX1..3.p2	
mm9_v1_chr7_-_134358872_134358952	0.0346409	RUNX1..3.p2	
mm9_v1_chr7_-_134537132_134537134	0.0346377	RUNX1..3.p2	BC010442|E430018J23Rik|101604|RIKEN cDNA E430018J23 gene	AK088474|E430018J23Rik|101604|RIKEN cDNA E430018J23 gene	NM_198011|E430018J23Rik|101604|RIKEN cDNA E430018J23 gene
mm9_v1_chr10_-_80363493_80363567	0.0345718	RUNX1..3.p2	AK009041|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK013230|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK003054|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK009152|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK088984|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	BC011436|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr14_-_21365388_21365411	0.0345635	RUNX1..3.p2	AK010955|2510010E17Rik|76590|RIKEN cDNA 2510010E17 gene
mm9_v1_chr3_-_54858963_54858976	0.0345564	RUNX1..3.p2	AK077114|Ccna1|12427|cyclin A1	NM_007628|Ccna1|12427|cyclin A1	X84311|Ccna1|12427|cyclin A1
mm9_v1_chr16_+_29209780_29209780	0.0344585	RUNX1..3.p2	AK039471|Hrasls|27281|HRAS-like suppressor	NM_013751|Hrasls|27281|HRAS-like suppressor
mm9_v1_chr2_-_167066066_167066088	0.0344487	RUNX1..3.p2	AK048059|Ptgis|19223|prostaglandin I2 (prostacyclin) synthase
mm9_v1_chr4_-_40800888_40800935	0.0344363	RUNX1..3.p2	M36289|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm9_v1_chr13_-_21808011_21808011	0.0342649	RUNX1..3.p2	NM_178199|Hist1h2bl|319185|histone cluster 1, H2bl
mm9_v1_chr13_-_43399540_43399575	0.0342565	RUNX1..3.p2	AK147458|Gfod1|328232|glucose-fructose oxidoreductase domain containing 1	NM_001033399|Gfod1|328232|glucose-fructose oxidoreductase domain containing 1
mm9_v1_chr11_-_79343891_79344047	0.0342558	RUNX1..3.p2	AK171332|Evi2a|14017|ecotropic viral integration site 2a	AK044098|Evi2a|14017|ecotropic viral integration site 2a	AK162958|Evi2a|14017|ecotropic viral integration site 2a	AK171594|Evi2a|14017|ecotropic viral integration site 2a	AK160302|Evi2a|14017|ecotropic viral integration site 2a	M34896|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr7_-_106987766_106987861	0.0340347	RUNX1..3.p2	AK180141|Spcs2|66624|signal peptidase complex subunit 2 homolog (S. cerevisiae)
mm9_v1_chr19_-_6982516_6982562	0.0339072	RUNX1..3.p2	AK209224|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr7_+_107641884_107641945	0.0338712	RUNX1..3.p2	BC012697|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)	U69135|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)	U94593|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)
mm9_v1_chr12_+_31596533_31596706	0.0336285	RUNX1..3.p2	AK141199|Sh3yl1|24057|Sh3 domain YSC-like 1	NM_013709|Sh3yl1|24057|Sh3 domain YSC-like 1	BC110043|Sh3yl1|24057|Sh3 domain YSC-like 1	BC058557|Sh3yl1|24057|Sh3 domain YSC-like 1	BC061488|Sh3yl1|24057|Sh3 domain YSC-like 1	AK080739|Sh3yl1|24057|Sh3 domain YSC-like 1
mm9_v1_chr2_+_27370649_27370751	0.0336146	RUNX1..3.p2	NM_080848|Wdr5|140858|WD repeat domain 5	BC025801|Wdr5|140858|WD repeat domain 5	AK075937|Wdr5|140858|WD repeat domain 5	AK144091|Wdr5|140858|WD repeat domain 5	BC016103|Wdr5|140858|WD repeat domain 5
mm9_v1_chr1_+_136456754_136456771	0.0335558	RUNX1..3.p2	NM_152895|Kdm5b|75605|lysine (K)-specific demethylase 5B	AK220451|Kdm5b|75605|lysine (K)-specific demethylase 5B	AY082429|Kdm5b|75605|lysine (K)-specific demethylase 5B	AY082430|Kdm5b|75605|lysine (K)-specific demethylase 5B	BC048180|Kdm5b|75605|lysine (K)-specific demethylase 5B	BC057318|Kdm5b|75605|lysine (K)-specific demethylase 5B
mm9_v1_chr7_+_50817739_50817739	0.033238	RUNX1..3.p2	AK155078|Zfp658|210104|zinc finger protein 658	NM_001008549|Zfp658|210104|zinc finger protein 658
mm9_v1_chr15_-_75911299_75911319	0.0332135	RUNX1..3.p2	BC010601|Puf60|67959|poly-U binding splicing factor 60	NM_001164600|Puf60|67959|poly-U binding splicing factor 60	AK013342|Puf60|67959|poly-U binding splicing factor 60	AK012434|Puf60|67959|poly-U binding splicing factor 60
mm9_v1_chr16_-_55895391_55895437	0.0331285	RUNX1..3.p2	NM_001134457|Fam55c|385658|family with sequence similarity 55, member C	AK157499|Fam55c|385658|family with sequence similarity 55, member C	NM_001134494|Fam55c|385658|family with sequence similarity 55, member C
mm9_v1_chr12_-_25323807_25323931	0.0330891	RUNX1..3.p2	AK216072|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like
mm9_v1_chr10_-_117147722_117147744	0.0330607	RUNX1..3.p2	X58876|Mdm2|17246|transformed mouse 3T3 cell double minute 2	BC050902|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK004881|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK088638|Mdm2|17246|transformed mouse 3T3 cell double minute 2
mm9_v1_chr1_+_174405490_174405627	0.0330447	RUNX1..3.p2	NM_029612|Slamf9|98365|SLAM family member 9	AK090041|Slamf9|98365|SLAM family member 9	AK009505|Slamf9|98365|SLAM family member 9	BC019477|Slamf9|98365|SLAM family member 9	AB196824|Slamf9|98365|SLAM family member 9	AB196825|Slamf9|98365|SLAM family member 9	AB196826|Slamf9|98365|SLAM family member 9	AB196827|Slamf9|98365|SLAM family member 9
mm9_v1_chr3_+_19957807_19957987	0.033038	RUNX1..3.p2	NM_009210|Hltf|20585|helicase-like transcription factor	NM_144959|Hltf|20585|helicase-like transcription factor	AK141235|Hltf|20585|helicase-like transcription factor	AF010600|Hltf|20585|helicase-like transcription factor	AF165911|Hltf|20585|helicase-like transcription factor	BC057116|Hltf|20585|helicase-like transcription factor	BC059240|Hltf|20585|helicase-like transcription factor	AK142961|Hltf|20585|helicase-like transcription factor	AK166911|Hltf|20585|helicase-like transcription factor	AB221636|Hltf|20585|helicase-like transcription factor
mm9_v1_chr10_-_70055559_70055571	0.0329386	RUNX1..3.p2	NM_001162846|Phyhipl|70911|phytanoyl-CoA hydroxylase interacting protein-like	AK014946|Phyhipl|70911|phytanoyl-CoA hydroxylase interacting protein-like
mm9_v1_chr10_-_128706371_128706376	0.0329189	RUNX1..3.p2	BC104277|Olfr777|258537|olfactory receptor 777	BC104276|Olfr777|258537|olfactory receptor 777	NM_146544|Olfr777|258537|olfactory receptor 777
mm9_v1_chr11_-_115560620_115560673	0.0328488	RUNX1..3.p2	D85748|Grb2|14784|growth factor receptor bound protein 2	U07617|Grb2|14784|growth factor receptor bound protein 2	AK170845|Grb2|14784|growth factor receptor bound protein 2
mm9_v1_chr1_-_72258684_72258880	0.0328242	RUNX1..3.p2	AY628210|Mreg|381269|melanoregulin	BC068125|Mreg|381269|melanoregulin	NM_001005423|Mreg|381269|melanoregulin
mm9_v1_chr3_+_61168428_61168660	0.0326487	RUNX1..3.p2	NM_028712|Rap2b|74012|RAP2B, member of RAS oncogene family	AK045030|Rap2b|74012|RAP2B, member of RAS oncogene family	AK014462|Rap2b|74012|RAP2B, member of RAS oncogene family	AK042941|Rap2b|74012|RAP2B, member of RAS oncogene family	AK163186|Rap2b|74012|RAP2B, member of RAS oncogene family	AK150187|Rap2b|74012|RAP2B, member of RAS oncogene family	BC046528|Rap2b|74012|RAP2B, member of RAS oncogene family
mm9_v1_chr9_-_103118185_103118198	0.0324949	RUNX1..3.p2	M23016|Trf|22041|transferrin
mm9_v1_chr19_+_10652212_10652359	0.0323672	RUNX1..3.p2	BC065078|Cybasc3|225912|cytochrome b, ascorbate dependent 3	NM_201351|Cybasc3|225912|cytochrome b, ascorbate dependent 3
mm9_v1_chr5_-_123183537_123183571	0.0323561	RUNX1..3.p2	AK213252|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr2_-_173044305_173044431	0.0322668	RUNX1..3.p2	AK008179|Zbp1|58203|Z-DNA binding protein 1	AX775969|Zbp1|58203|Z-DNA binding protein 1	AX775971|Zbp1|58203|Z-DNA binding protein 1	AF136520|Zbp1|58203|Z-DNA binding protein 1	BC020033|Zbp1|58203|Z-DNA binding protein 1	AK157215|Zbp1|58203|Z-DNA binding protein 1	NM_001139519|Zbp1|58203|Z-DNA binding protein 1	NM_021394|Zbp1|58203|Z-DNA binding protein 1
mm9_v1_chr11_+_94812919_94812953	0.0322506	RUNX1..3.p2	AK159300|Col1a1|12842|collagen, type I, alpha 1
mm9_v1_chr18_-_24178797_24178851	0.0321664	RUNX1..3.p2	BC011345|Zfp191|59057|zinc finger protein 191
mm9_v1_chr15_-_82983986_82984219	0.0319319	RUNX1..3.p2	AK201219|Cyb5r3|109754|cytochrome b5 reductase 3	AK202020|Cyb5r3|109754|cytochrome b5 reductase 3	AK210504|Cyb5r3|109754|cytochrome b5 reductase 3
mm9_v1_chr2_+_181415021_181415025	0.0318539	RUNX1..3.p2	BC049617|Tcea2|21400|transcription elongation factor A (SII), 2	BC065786|Tcea2|21400|transcription elongation factor A (SII), 2	BC138504|Tcea2|21400|transcription elongation factor A (SII), 2	BC138505|Tcea2|21400|transcription elongation factor A (SII), 2
mm9_v1_chr5_-_20930494_20930494	0.0318331	RUNX1..3.p2	AK015926|Ccdc146|75172|coiled-coil domain containing 146	NM_029195|Ccdc146|75172|coiled-coil domain containing 146
mm9_v1_chr6_-_29457924_29457972	0.0317741	RUNX1..3.p2	BC119794|Kcp|333088|kielin/chordin-like protein	NM_001029985|Kcp|333088|kielin/chordin-like protein	AY884211|Kcp|333088|kielin/chordin-like protein	AK154369|Kcp|333088|kielin/chordin-like protein
mm9_v1_chr11_-_78325602_78325669	0.0317727	RUNX1..3.p2	AK156856|Tmem199|195040|transmembrane protein 199	AK158039|Tmem199|195040|transmembrane protein 199	BC050977|Tmem199|195040|transmembrane protein 199	BC147070|Tmem199|195040|transmembrane protein 199	BC147071|Tmem199|195040|transmembrane protein 199	NM_199199|Tmem199|195040|transmembrane protein 199
mm9_v1_chr5_-_147395979_147395979	0.0317687	RUNX1..3.p2	BC055746|Gpr12|14738|G-protein coupled receptor 12	NM_008151|Gpr12|14738|G-protein coupled receptor 12
mm9_v1_chr8_+_91045333_91045405	0.0317379	RUNX1..3.p2	AF358134|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	AF343352|Nkd1|93960|naked cuticle 1 homolog (Drosophila)
mm9_v1_chr5_-_122110456_122110520	0.0317332	RUNX1..3.p2	BC027825|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10	AK050332|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10	AK148195|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10	NM_028037|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10
mm9_v1_chrX_-_149471740_149472145	0.0317245	RUNX1..3.p2	AK008349|Mageh1|75625|melanoma antigen, family H, 1	AF319981|Mageh1|75625|melanoma antigen, family H, 1	BC058380|Mageh1|75625|melanoma antigen, family H, 1	BC051935|Mageh1|75625|melanoma antigen, family H, 1	BC060080|Mageh1|75625|melanoma antigen, family H, 1	AK145866|Mageh1|75625|melanoma antigen, family H, 1	NM_023788|Mageh1|75625|melanoma antigen, family H, 1	AK000896|Mageh1|75625|melanoma antigen, family H, 1
mm9_v1_chr10_+_83006673_83006768	0.0316005	RUNX1..3.p2	NM_001033375|A230046K03Rik|319277|RIKEN cDNA A230046K03 gene	AK145000|A230046K03Rik|319277|RIKEN cDNA A230046K03 gene	AK166233|A230046K03Rik|319277|RIKEN cDNA A230046K03 gene	AK043911|A230046K03Rik|319277|RIKEN cDNA A230046K03 gene	AK038582|A230046K03Rik|319277|RIKEN cDNA A230046K03 gene
mm9_v1_chr3_+_108394195_108394337	0.0315192	RUNX1..3.p2	NM_181400|Wdr47|99512|WD repeat domain 47	AK047357|Wdr47|99512|WD repeat domain 47	AK163422|Wdr47|99512|WD repeat domain 47	BC040337|Wdr47|99512|WD repeat domain 47
mm9_v1_chr7_-_52965801_52965838	0.0314372	RUNX1..3.p2	AK198375|Sphk2|56632|sphingosine kinase 2	AK202851|Sphk2|56632|sphingosine kinase 2
mm9_v1_chrX_-_71473577_71473681	0.0313781	RUNX1..3.p2	AF353671|Flna|192176|filamin, alpha
mm9_v1_chr2_-_163450863_163450871	0.0312672	RUNX1..3.p2	AK003471|Serinc3|26943|serine incorporator 3
mm9_v1_chr1_+_34496673_34496884	0.0311825	RUNX1..3.p2	NM_178601|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK151176|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK152214|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK008178|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK010504|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK018039|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK166903|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK084933|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK013334|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC069930|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AF334609|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK004135|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC037602|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr17_+_46818005_46818130	0.0310743	RUNX1..3.p2	AK010863|Mea1|17256|male enhanced antigen 1	AK008305|Mea1|17256|male enhanced antigen 1	AK008194|Mea1|17256|male enhanced antigen 1	AK010904|Mea1|17256|male enhanced antigen 1	AK010962|Mea1|17256|male enhanced antigen 1	AK012617|Mea1|17256|male enhanced antigen 1	AK005369|Mea1|17256|male enhanced antigen 1	AK005106|Mea1|17256|male enhanced antigen 1	L10401|Mea1|17256|male enhanced antigen 1	M27938|Mea1|17256|male enhanced antigen 1	NM_010787|Mea1|17256|male enhanced antigen 1	AK011189|Mea1|17256|male enhanced antigen 1	D17341|Mea1|17256|male enhanced antigen 1
mm9_v1_chr4_+_109349189_109349242	0.0309572	RUNX1..3.p2	BC065098|Faf1|14084|Fas-associated factor 1	NM_007983|Faf1|14084|Fas-associated factor 1
mm9_v1_chr11_-_6100164_6100207	0.0309468	RUNX1..3.p2	AK049739|Nudcd3|209586|NudC domain containing 3	AK171224|Nudcd3|209586|NudC domain containing 3	BC024322|Nudcd3|209586|NudC domain containing 3	AK046219|Nudcd3|209586|NudC domain containing 3	AK030050|Nudcd3|209586|NudC domain containing 3	AK159391|Nudcd3|209586|NudC domain containing 3	AK159458|Nudcd3|209586|NudC domain containing 3	AK170329|Nudcd3|209586|NudC domain containing 3	AK169797|Nudcd3|209586|NudC domain containing 3
mm9_v1_chr17_+_36054140_36054142	0.0308578	RUNX1..3.p2	BC052059|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	NM_001163818|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AJ504718|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10
mm9_v1_chr2_+_127034130_127034141	0.0308093	RUNX1..3.p2	AK039567|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	BC063261|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	NM_177214|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)
mm9_v1_chr2_+_25356281_25356297	0.0307143	RUNX1..3.p2	AK019715|Fbxw5|30839|F-box and WD-40 domain protein 5	NM_013908|Fbxw5|30839|F-box and WD-40 domain protein 5
mm9_v1_chr19_+_57435735_57435759	0.030708	RUNX1..3.p2	BC062949|Fam160b1|226252|family with sequence similarity 160, member B1
mm9_v1_chr3_+_89263237_89263263	0.0306188	RUNX1..3.p2	AK003607|Pmvk|68603|phosphomevalonate kinase
mm9_v1_chr11_+_94426358_94426387	0.030401	RUNX1..3.p2	AK158297|Chad|12643|chondroadherin	NM_007689|Chad|12643|chondroadherin
mm9_v1_chr11_+_67779990_67779991	0.0303463	RUNX1..3.p2	AK018716|Stx8|55943|syntaxin 8
mm9_v1_chr11_+_72774709_72774812	0.0303133	RUNX1..3.p2	BC026147|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	BC017639|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	U49393|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous	U49394|Atp2a3|53313|ATPase, Ca++ transporting, ubiquitous
mm9_v1_chr6_+_122871804_122871930	0.0302093	RUNX1..3.p2	BC049354|Clec4a1|269799|C-type lectin domain family 4, member a1	NM_199311|Clec4a1|269799|C-type lectin domain family 4, member a1	AY397675|Clec4a1|269799|C-type lectin domain family 4, member a1
mm9_v1_chr2_-_37558818_37558881	0.0300339	RUNX1..3.p2	AK043648|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr11_-_97643570_97643598	0.0300071	RUNX1..3.p2	AK139855|Rpl23|65019|ribosomal protein L23
mm9_v1_chr10_-_76576422_76576449	0.0299378	RUNX1..3.p2	U11637|Col18a1|12822|collagen, type XVIII, alpha 1	BC043697|Col18a1|12822|collagen, type XVIII, alpha 1	NM_001109991|Col18a1|12822|collagen, type XVIII, alpha 1
mm9_v1_chr2_+_30219837_30219854	0.0298882	RUNX1..3.p2	BC051404|Fam73b|108958|family with sequence similarity 73, member B	NM_175392|Fam73b|108958|family with sequence similarity 73, member B
mm9_v1_chr9_+_5298516_5298702	0.0297592	RUNX1..3.p2	BC008152|Casp1|12362|caspase 1	NM_009807|Casp1|12362|caspase 1	L28095|Casp1|12362|caspase 1	AK132826|Casp1|12362|caspase 1	AK163069|Casp1|12362|caspase 1
mm9_v1_chr2_+_80457201_80457422	0.0297204	RUNX1..3.p2	AF237618|Dusp19|68082|dual specificity phosphatase 19	NM_024438|Dusp19|68082|dual specificity phosphatase 19	AK010127|Dusp19|68082|dual specificity phosphatase 19	AK077871|Dusp19|68082|dual specificity phosphatase 19	AK170170|Dusp19|68082|dual specificity phosphatase 19	AK018369|Dusp19|68082|dual specificity phosphatase 19	AB051896|Dusp19|68082|dual specificity phosphatase 19	AK049927|Dusp19|68082|dual specificity phosphatase 19	AB038769|Dusp19|68082|dual specificity phosphatase 19	BC021591|Dusp19|68082|dual specificity phosphatase 19	AK083610|Dusp19|68082|dual specificity phosphatase 19
mm9_v1_chr7_+_134716853_134716888	0.0296731	RUNX1..3.p2	AK079680|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)	NM_026888|Phkg2|68961|phosphorylase kinase, gamma 2 (testis)
mm9_v1_chr19_+_5366812_5366812	0.0295292	RUNX1..3.p2	BC024640|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing	NM_027236|Eif1ad|69860|eukaryotic translation initiation factor 1A domain containing
mm9_v1_chr1_+_92100572_92100639	0.0294024	RUNX1..3.p2	AK031100|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	NM_007722|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	AF000236|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	BC015254|Cxcr7|12778|chemokine (C-X-C motif) receptor 7
mm9_v1_chr8_-_72758007_72758039	0.0291562	RUNX1..3.p2	AK080609|Armc6|76813|armadillo repeat containing 6	AK049351|Armc6|76813|armadillo repeat containing 6
mm9_v1_chr12_-_70825850_70825878	0.0291278	RUNX1..3.p2	AK145228|L2hgdh|217666|L-2-hydroxyglutarate dehydrogenase	NM_145443|L2hgdh|217666|L-2-hydroxyglutarate dehydrogenase
mm9_v1_chr19_+_6306456_6306644	0.028989	RUNX1..3.p2	NM_001033342|Cdc42bpg|240505|CDC42 binding protein kinase gamma (DMPK-like)
mm9_v1_chr13_-_96661704_96661910	0.0289328	RUNX1..3.p2	BC094939|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC052916|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK080384|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK147360|Iqgap2|544963|IQ motif containing GTPase activating protein 2	BC150958|Iqgap2|544963|IQ motif containing GTPase activating protein 2	AK142813|Iqgap2|544963|IQ motif containing GTPase activating protein 2	NM_027711|Iqgap2|544963|IQ motif containing GTPase activating protein 2
mm9_v1_chr1_+_94807324_94807438	0.0288967	RUNX1..3.p2	AK154881|Rnpepl1|108657|arginyl aminopeptidase (aminopeptidase B)-like 1	AK133751|Rnpepl1|108657|arginyl aminopeptidase (aminopeptidase B)-like 1
mm9_v1_chr5_+_3543815_3543891	0.0288759	RUNX1..3.p2	AK008115|Fam133b|68152|family with sequence similarity 133, member B	AK019188|Fam133b|68152|family with sequence similarity 133, member B	NM_001042501|Fam133b|68152|family with sequence similarity 133, member B	AK020011|Fam133b|68152|family with sequence similarity 133, member B	BC147310|Fam133b|68152|family with sequence similarity 133, member B	BC147311|Fam133b|68152|family with sequence similarity 133, member B	BC172033|Fam133b|68152|family with sequence similarity 133, member B	BC027051|Fam133b|68152|family with sequence similarity 133, member B	AK161505|Fam133b|68152|family with sequence similarity 133, member B
mm9_v1_chr3_+_144260300_144260351	0.0288327	RUNX1..3.p2	AK205282|Sep15|93684|selenoprotein	AK213933|Sep15|93684|selenoprotein	AK218207|Sep15|93684|selenoprotein
mm9_v1_chr18_-_62708315_62708333	0.0287452	RUNX1..3.p2	AY267463|Fbxo38|107035|F-box protein 38	AK031347|Fbxo38|107035|F-box protein 38
mm9_v1_chr11_-_61191548_61191595	0.0286087	RUNX1..3.p2	BC031436|Slc47a1|67473|solute carrier family 47, member 1	AK004994|Slc47a1|67473|solute carrier family 47, member 1	NM_026183|Slc47a1|67473|solute carrier family 47, member 1
mm9_v1_chr16_+_10545479_10545491	0.0285972	RUNX1..3.p2	AK122255|Clec16a|74374|C-type lectin domain family 16, member A	NM_177562|Clec16a|74374|C-type lectin domain family 16, member A	AK155314|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr15_-_54109855_54110038	0.0285316	RUNX1..3.p2	BC049782|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK140244|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	U94331|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK146105|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AB013898|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	NM_008764|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
mm9_v1_chr13_-_67585160_67585193	0.0280685	RUNX1..3.p2	AK137581|Zfp874b|408067|zinc finger protein 874b	NM_001076791|Zfp874b|408067|zinc finger protein 874b	AK079330|Zfp874b|408067|zinc finger protein 874b
mm9_v1_chr8_-_97855675_97855849	0.0279679	RUNX1..3.p2	BC033441|Zfp319|79233|zinc finger protein 319	AK052274|Zfp319|79233|zinc finger protein 319	AK089263|Zfp319|79233|zinc finger protein 319	AK048624|Zfp319|79233|zinc finger protein 319	BC059823|Zfp319|79233|zinc finger protein 319	NM_024467|Zfp319|79233|zinc finger protein 319
mm9_v1_chr7_+_63185457_63185630	0.0279568	RUNX1..3.p2	AK195390|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	AK052509|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1
mm9_v1_chr3_+_88968894_88969004	0.0279397	RUNX1..3.p2	AF033564|Clk2|12748|CDC-like kinase 2
mm9_v1_chr2_+_180234680_180234753	0.0278629	RUNX1..3.p2	AB017027|Ntsr1|18216|neurotensin receptor 1	NM_018766|Ntsr1|18216|neurotensin receptor 1	BC087730|Ntsr1|18216|neurotensin receptor 1
mm9_v1_chrX_+_57252630_57252647	0.0277761	RUNX1..3.p2	AK149372|F9|14071|coagulation factor IX	NM_007979|F9|14071|coagulation factor IX	BC125617|F9|14071|coagulation factor IX	BC132393|F9|14071|coagulation factor IX
mm9_v1_chr2_+_111323505_111323588	0.0277239	RUNX1..3.p2	BC137761|Olfr1289|258399|olfactory receptor 1289	BC120736|Olfr1289|258399|olfactory receptor 1289	NM_146404|Olfr1289|258399|olfactory receptor 1289
mm9_v1_chr8_-_114378162_114378252	0.0276883	RUNX1..3.p2	AK160532|Cfdp1|23837|craniofacial development protein 1	BC005589|Cfdp1|23837|craniofacial development protein 1	AB010828|Cfdp1|23837|craniofacial development protein 1	NM_011801|Cfdp1|23837|craniofacial development protein 1	Y08219|Cfdp1|23837|craniofacial development protein 1	AK133989|Cfdp1|23837|craniofacial development protein 1
mm9_v1_chr4_-_116494091_116494112	0.0276122	RUNX1..3.p2	AK049217|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like	AK043902|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like	AK078929|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like	NM_146256|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like
mm9_v1_chr10_-_81510750_81510782	0.0276096	RUNX1..3.p2	AK136722|AL117821|404580|expressed sequence AL117821
mm9_v1_chr10_-_79869574_79869589	0.0276047	RUNX1..3.p2	AK003033|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI
mm9_v1_chr8_+_128193717_128193790	0.0274737	RUNX1..3.p2	NM_028908|4933403G14Rik|74393|RIKEN cDNA 4933403G14 gene	AK042358|4933403G14Rik|74393|RIKEN cDNA 4933403G14 gene	AK016632|4933403G14Rik|74393|RIKEN cDNA 4933403G14 gene	AK080043|4933403G14Rik|74393|RIKEN cDNA 4933403G14 gene	AK220388|4933403G14Rik|74393|RIKEN cDNA 4933403G14 gene
mm9_v1_chr4_+_151706542_151706590	0.0273962	RUNX1..3.p2	AK207296|Rpl22|19934|ribosomal protein L22
mm9_v1_chr11_+_81915343_81915390	0.0273604	RUNX1..3.p2	AK012356|Ccl12|20293|chemokine (C-C motif) ligand 12	NM_011331|Ccl12|20293|chemokine (C-C motif) ligand 12	U50712|Ccl12|20293|chemokine (C-C motif) ligand 12	U66670|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065934|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065935|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065936|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065937|Ccl12|20293|chemokine (C-C motif) ligand 12	AF065938|Ccl12|20293|chemokine (C-C motif) ligand 12	BC027520|Ccl12|20293|chemokine (C-C motif) ligand 12
mm9_v1_chr9_+_108382180_108382248	0.0273164	RUNX1..3.p2	NM_008483|Lamb2|16779|laminin, beta 2	AK140351|Lamb2|16779|laminin, beta 2	AK158444|Lamb2|16779|laminin, beta 2
mm9_v1_chr7_-_52494453_52494466	0.0272656	RUNX1..3.p2	AK154466|Cd37|12493|CD37 antigen
mm9_v1_chr8_-_75876420_75876517	0.0269996	RUNX1..3.p2	BC125487|Large|16795|like-glycosyltransferase	BC125489|Large|16795|like-glycosyltransferase	AJ006278|Large|16795|like-glycosyltransferase	NM_010687|Large|16795|like-glycosyltransferase	BC100399|Large|16795|like-glycosyltransferase
mm9_v1_chr3_+_87600872_87601015	0.0269443	RUNX1..3.p2	AK142578|Insrr|23920|insulin receptor-related receptor	NM_011832|Insrr|23920|insulin receptor-related receptor	AK081512|Insrr|23920|insulin receptor-related receptor	AB007135|Insrr|23920|insulin receptor-related receptor	BC137855|Insrr|23920|insulin receptor-related receptor
mm9_v1_chr11_-_76031013_76031165	0.0268047	RUNX1..3.p2	BC031425|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK028076|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK165864|Gemin4|276919|gem (nuclear organelle) associated protein 4	BC062157|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK141078|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK154061|Gemin4|276919|gem (nuclear organelle) associated protein 4	NM_177367|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK133821|Gemin4|276919|gem (nuclear organelle) associated protein 4
mm9_v1_chr13_+_31650033_31650038	0.0267929	RUNX1..3.p2	AK147202|Foxq1|15220|forkhead box Q1	NM_008239|Foxq1|15220|forkhead box Q1
mm9_v1_chr13_+_59686693_59686787	0.026756	RUNX1..3.p2	NM_030153|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC027201|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	AY102701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC043701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC056435|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm9_v1_chr11_-_97745402_97745467	0.0266448	RUNX1..3.p2	BC158049|Fbxo47|72973|F-box protein 47	NM_001081435|Fbxo47|72973|F-box protein 47
mm9_v1_chr1_-_163748523_163748605	0.0266353	RUNX1..3.p2	AK033720|AI848100|226551|expressed sequence AI848100
mm9_v1_chr18_-_61885933_61886002	0.0265849	RUNX1..3.p2	AF041060|Grpel2|17714|GrpE-like 2, mitochondrial	BC094583|Grpel2|17714|GrpE-like 2, mitochondrial	BC068232|Grpel2|17714|GrpE-like 2, mitochondrial	AK012634|Grpel2|17714|GrpE-like 2, mitochondrial	AK134455|Grpel2|17714|GrpE-like 2, mitochondrial	AK003011|Grpel2|17714|GrpE-like 2, mitochondrial	AK082983|Grpel2|17714|GrpE-like 2, mitochondrial	BC120747|Grpel2|17714|GrpE-like 2, mitochondrial	AK145493|Grpel2|17714|GrpE-like 2, mitochondrial	NM_021296|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr8_+_108939222_108939238	0.0265493	RUNX1..3.p2	AK032286|Zfp90|22751|zinc finger protein 90	AK154205|Zfp90|22751|zinc finger protein 90	NM_011764|Zfp90|22751|zinc finger protein 90
mm9_v1_chr3_-_88262982_88263022	0.0263532	RUNX1..3.p2	NM_001163490|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr5_-_145908992_145909289	0.0262017	RUNX1..3.p2	AK216509|Ptcd1|71799|pentatricopeptide repeat domain 1	AK213622|Ptcd1|71799|pentatricopeptide repeat domain 1	AK004421|Ptcd1|71799|pentatricopeptide repeat domain 1	AK218479|Ptcd1|71799|pentatricopeptide repeat domain 1	AK166306|Ptcd1|71799|pentatricopeptide repeat domain 1
mm9_v1_chr10_-_121063321_121063512	0.0261911	RUNX1..3.p2	NM_001081056|Xpot|73192|exportin, tRNA (nuclear export receptor for tRNAs)
mm9_v1_chr2_+_30122064_30122111	0.0261285	RUNX1..3.p2	NM_172267|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC132271|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC132273|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC145356|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC171925|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1
mm9_v1_chr11_-_4494815_4494822	0.0260804	RUNX1..3.p2	NM_028860|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr11_+_114751354_114751532	0.0258481	RUNX1..3.p2	AK045869|Cd300a|217303|CD300A antigen	NM_170758|Cd300a|217303|CD300A antigen	BC139296|Cd300a|217303|CD300A antigen	BC139297|Cd300a|217303|CD300A antigen	AB095675|Cd300a|217303|CD300A antigen
mm9_v1_chr7_+_52690164_52690415	0.025823	RUNX1..3.p2	NM_030678|Gys1|14936|glycogen synthase 1, muscle	AK169344|Gys1|14936|glycogen synthase 1, muscle	AK170404|Gys1|14936|glycogen synthase 1, muscle	AK171426|Gys1|14936|glycogen synthase 1, muscle	AK171148|Gys1|14936|glycogen synthase 1, muscle	AK170585|Gys1|14936|glycogen synthase 1, muscle	X94616|Gys1|14936|glycogen synthase 1, muscle	BC131687|Gys1|14936|glycogen synthase 1, muscle	BC131688|Gys1|14936|glycogen synthase 1, muscle	BC152550|Gys1|14936|glycogen synthase 1, muscle	U53218|Gys1|14936|glycogen synthase 1, muscle	BC019389|Gys1|14936|glycogen synthase 1, muscle
mm9_v1_chr4_-_63156099_63156155	0.0257465	RUNX1..3.p2	AK122523|Whrn|73750|whirlin
mm9_v1_chr6_-_24614975_24615061	0.0255964	RUNX1..3.p2	AK143969|Wasl|73178|Wiskott-Aldrich syndrome-like (human)	AK014104|Wasl|73178|Wiskott-Aldrich syndrome-like (human)	BC058642|Wasl|73178|Wiskott-Aldrich syndrome-like (human)	NM_001167745|Wasl|73178|Wiskott-Aldrich syndrome-like (human)	NM_028459|Wasl|73178|Wiskott-Aldrich syndrome-like (human)
mm9_v1_chr4_+_154624074_154624074	0.0255365	RUNX1..3.p2	AK011291|2610002J02Rik|67513|RIKEN cDNA 2610002J02 gene	NM_001190445|2610002J02Rik|67513|RIKEN cDNA 2610002J02 gene
mm9_v1_chr4_-_125933482_125933589	0.0254325	RUNX1..3.p2	BC023677|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	BC023774|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	AK151613|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_001145970|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_144941|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1
mm9_v1_chr13_-_21879086_21879086	0.0254092	RUNX1..3.p2	NM_178184|Hist1h2an|319170|histone cluster 1, H2an
mm9_v1_chr5_-_125342474_125342590	0.0253581	RUNX1..3.p2	BC021492|Ccdc92|215707|coiled-coil domain containing 92	AK028192|Ccdc92|215707|coiled-coil domain containing 92	AK165371|Ccdc92|215707|coiled-coil domain containing 92	NM_144819|Ccdc92|215707|coiled-coil domain containing 92
mm9_v1_chr8_-_86217895_86217983	0.0253145	RUNX1..3.p2	AK150062|Pkn1|320795|protein kinase N1	AK149649|Pkn1|320795|protein kinase N1	AK089431|Pkn1|320795|protein kinase N1	AK171297|Pkn1|320795|protein kinase N1
mm9_v1_chr1_-_97564064_97564129	0.0252431	RUNX1..3.p2	AK041723|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK003690|St8sia4|20452|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm9_v1_chr7_-_54387915_54388047	0.0252163	RUNX1..3.p2	NM_001163565|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	BC079592|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr9_-_42280256_42280323	0.0250959	RUNX1..3.p2	BC139386|Tbcel|272589|tubulin folding cofactor E-like	BC139387|Tbcel|272589|tubulin folding cofactor E-like	AK077017|Tbcel|272589|tubulin folding cofactor E-like	NM_173038|Tbcel|272589|tubulin folding cofactor E-like	AK084854|Tbcel|272589|tubulin folding cofactor E-like
mm9_v1_chr9_-_96978102_96978110	0.0250201	RUNX1..3.p2	AK087750|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr10_-_92773778_92773948	0.0249765	RUNX1..3.p2	Z32815|Elk3|13713|ELK3, member of ETS oncogene family	L19953|Elk3|13713|ELK3, member of ETS oncogene family	BC005686|Elk3|13713|ELK3, member of ETS oncogene family	NM_013508|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr8_+_125641197_125641276	0.0249716	RUNX1..3.p2	AK162900|Cpne7|102278|copine VII	NM_170684|Cpne7|102278|copine VII
mm9_v1_chr11_+_78136690_78136700	0.0247796	RUNX1..3.p2	BC004802|Aldoc|11676|aldolase C, fructose-bisphosphate	BC008184|Aldoc|11676|aldolase C, fructose-bisphosphate
mm9_v1_chr11_+_63893006_63893054	0.0245764	RUNX1..3.p2	AK005116|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene
mm9_v1_chr5_+_122135788_122135908	0.0245173	RUNX1..3.p2	AK215013|Brap|72399|BRCA1 associated protein	AK197500|Brap|72399|BRCA1 associated protein
mm9_v1_chr11_+_72812583_72812651	0.0244905	RUNX1..3.p2	AF310647|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1	BC015084|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1	AK035304|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1	NM_008771|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1	X84896|P2rx1|18436|purinergic receptor P2X, ligand-gated ion channel, 1
mm9_v1_chr14_+_61928589_61928687	0.0242161	RUNX1..3.p2	BC064093|Arl11|219144|ADP-ribosylation factor-like 11	NM_177337|Arl11|219144|ADP-ribosylation factor-like 11	AK155765|Arl11|219144|ADP-ribosylation factor-like 11	AK050053|Arl11|219144|ADP-ribosylation factor-like 11	AK008804|Arl11|219144|ADP-ribosylation factor-like 11
mm9_v1_chr17_+_35137995_35138088	0.0242076	RUNX1..3.p2	AK157814|Vars|22321|valyl-tRNA synthetase	AK012123|Vars|22321|valyl-tRNA synthetase	AK154823|Vars|22321|valyl-tRNA synthetase	BC053703|Vars|22321|valyl-tRNA synthetase	AF087680|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr2_-_85681945_85681945	0.0241979	RUNX1..3.p2	BC117705|Olfr1019|259017|olfactory receptor 1019	BC117706|Olfr1019|259017|olfactory receptor 1019	NM_147015|Olfr1019|259017|olfactory receptor 1019
mm9_v1_chr6_-_124688630_124688780	0.0241883	RUNX1..3.p2	AK150509|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK132509|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	NM_001077705|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6
mm9_v1_chr10_+_126603057_126603111	0.0241258	RUNX1..3.p2	U18975|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr11_-_101828286_101828333	0.0241102	RUNX1..3.p2	AF326740|Sost|74499|sclerostin	BC137832|Sost|74499|sclerostin	BC137833|Sost|74499|sclerostin	AK017295|Sost|74499|sclerostin	AK041382|Sost|74499|sclerostin	NM_024449|Sost|74499|sclerostin
mm9_v1_chr17_-_36115915_36115943	0.0240553	RUNX1..3.p2	BC016636|Prr3|75210|proline-rich polypeptide 3
mm9_v1_chr5_+_28168688_28168939	0.0240454	RUNX1..3.p2	AK141636|Htr5a|15563|5-hydroxytryptamine (serotonin) receptor 5A	BC115911|Htr5a|15563|5-hydroxytryptamine (serotonin) receptor 5A	BC116654|Htr5a|15563|5-hydroxytryptamine (serotonin) receptor 5A
mm9_v1_chr6_-_35258102_35258131	0.0237533	RUNX1..3.p2	BC089161|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK036354|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	NM_172892|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK038937|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK139428|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4
mm9_v1_chr9_-_26815760_26815835	0.0236252	RUNX1..3.p2	AK210283|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)
mm9_v1_chr5_+_135462204_135462439	0.0235775	RUNX1..3.p2	AF095905|Cldn3|12739|claudin 3	BC012650|Cldn3|12739|claudin 3	AF087821|Cldn3|12739|claudin 3	BC023269|Cldn3|12739|claudin 3	AK165808|Cldn3|12739|claudin 3
mm9_v1_chr18_-_16967754_16967859	0.0234891	RUNX1..3.p2	AK146981|Cdh2|12558|cadherin 2
mm9_v1_chr12_-_85958287_85958415	0.0232221	RUNX1..3.p2	AJ001166|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	AK028420|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	BC050102|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	NM_008992|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4
mm9_v1_chr18_-_43597640_43597708	0.0230278	RUNX1..3.p2	AK149024|Dpysl3|22240|dihydropyrimidinase-like 3
mm9_v1_chr18_-_37803782_37803859	0.0229772	RUNX1..3.p2	BC029673|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AF144562|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK075700|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK029380|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK076362|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK089054|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_175770|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr3_-_109946095_109946180	0.0229742	RUNX1..3.p2	AB038667|Ntng1|80883|netrin G1	AK173075|Ntng1|80883|netrin G1
mm9_v1_chr6_-_52114644_52114829	0.0229502	RUNX1..3.p2	AB221621|Hoxa2|15399|homeobox A2	M93292|Hoxa2|15399|homeobox A2	BC117105|Hoxa2|15399|homeobox A2	BC117107|Hoxa2|15399|homeobox A2	BC027688|Hoxa2|15399|homeobox A2	M95599|Hoxa2|15399|homeobox A2	NM_010451|Hoxa2|15399|homeobox A2
mm9_v1_chrX_-_71526939_71526996	0.0229501	RUNX1..3.p2	DQ116784|Dnase1l1|69537|deoxyribonuclease 1-like 1	AK150242|Dnase1l1|69537|deoxyribonuclease 1-like 1
mm9_v1_chr13_+_13682675_13682689	0.0228971	RUNX1..3.p2	L77884|Lyst|17101|lysosomal trafficking regulator	NM_010748|Lyst|17101|lysosomal trafficking regulator	U70015|Lyst|17101|lysosomal trafficking regulator
mm9_v1_chr2_-_84614960_84614971	0.0228168	RUNX1..3.p2	BC002026|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	AK167585|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm9_v1_chr17_+_36053855_36053941	0.0227641	RUNX1..3.p2	NM_175934|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK004266|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK011552|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK079389|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK031654|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK053183|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AK079918|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	BC030903|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10
mm9_v1_chr4_+_147242922_147243087	0.0227419	RUNX1..3.p2	NM_010244|Fv1|14349|Friend virus susceptibility 1
mm9_v1_chr9_+_102620051_102620053	0.0226943	RUNX1..3.p2	AK040912|Amotl2|56332|angiomotin-like 2
mm9_v1_chr9_-_48719069_48719203	0.0226227	RUNX1..3.p2	AY605711|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	AF513221|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	X72395|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	BC144799|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	BC145743|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	M74425|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	NM_001099644|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	NM_013561|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A
mm9_v1_chr11_+_20991293_20991320	0.0224279	RUNX1..3.p2	AK020915|Peli1|67245|pellino 1
mm9_v1_chr15_-_76180500_76180651	0.0223881	RUNX1..3.p2	AK178398|Sharpin|106025|SHANK-associated RH domain interacting protein
mm9_v1_chr11_+_95343299_95343327	0.0223233	RUNX1..3.p2	
mm9_v1_chr2_-_30816439_30816626	0.0222367	RUNX1..3.p2	
mm9_v1_chr2_+_118214394_118214397	0.0221733	RUNX1..3.p2	AK013758|Eif2ak4|27103|eukaryotic translation initiation factor 2 alpha kinase 4
mm9_v1_chr12_+_56404272_56404278	0.0221171	RUNX1..3.p2	AK172942|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr5_+_122822505_122822541	0.022088	RUNX1..3.p2	BC003341|Gpn3|68080|GPN-loop GTPase 3	NM_024216|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chrX_+_93651684_93651766	0.0220734	RUNX1..3.p2	NM_001159627|Heph|15203|hephaestin	NM_181273|Heph|15203|hephaestin	AK081330|Heph|15203|hephaestin	AK129194|Heph|15203|hephaestin	AK032895|Heph|15203|hephaestin	AK086923|Heph|15203|hephaestin
mm9_v1_chr1_+_154621524_154621665	0.0220628	RUNX1..3.p2	AK209951|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK205293|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr7_-_81429262_81429274	0.0220068	RUNX1..3.p2	AK020010|Slco3a1|108116|solute carrier organic anion transporter family, member 3a1
mm9_v1_chr11_+_102977638_102977680	0.0218977	RUNX1..3.p2	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr4_-_140674616_140674640	0.0218859	RUNX1..3.p2	
mm9_v1_chr7_+_52112520_52112725	0.0218736	RUNX1..3.p2	AK160160|Pnkp|59047|polynucleotide kinase 3'- phosphatase	NM_021549|Pnkp|59047|polynucleotide kinase 3'- phosphatase	BC047269|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK049992|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK172558|Pnkp|59047|polynucleotide kinase 3'- phosphatase	BC057659|Pnkp|59047|polynucleotide kinase 3'- phosphatase
mm9_v1_chr7_-_149846916_149846939	0.0218332	RUNX1..3.p2	NM_001122736|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr10_+_4978128_4978288	0.0218113	RUNX1..3.p2	AK032502|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr1_+_43155550_43155613	0.0217988	RUNX1..3.p2	BC006931|AI597479|98404|expressed sequence AI597479	NM_133818|AI597479|98404|expressed sequence AI597479	AK081372|AI597479|98404|expressed sequence AI597479
mm9_v1_chr11_+_88006704_88006818	0.0217021	RUNX1..3.p2	BC027667|Cuedc1|103841|CUE domain containing 1	BC051492|Cuedc1|103841|CUE domain containing 1
mm9_v1_chr18_-_85120825_85120843	0.0216943	RUNX1..3.p2	AK168105|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK013281|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene
mm9_v1_chr6_+_55153376_55153497	0.0216291	RUNX1..3.p2	AK082855|Fam188b|330323|family with sequence similarity 188, member B	NM_001142781|Fam188b|330323|family with sequence similarity 188, member B	NM_177883|Fam188b|330323|family with sequence similarity 188, member B	BC118939|Fam188b|330323|family with sequence similarity 188, member B	BC118940|Fam188b|330323|family with sequence similarity 188, member B	AK142385|Fam188b|330323|family with sequence similarity 188, member B	AK161304|Fam188b|330323|family with sequence similarity 188, member B
mm9_v1_chr11_+_76031114_76031154	0.0215727	RUNX1..3.p2	NM_021294|Dbil5|13168|diazepam binding inhibitor-like 5	S83465|Dbil5|13168|diazepam binding inhibitor-like 5	BC048474|Dbil5|13168|diazepam binding inhibitor-like 5	AK006528|Dbil5|13168|diazepam binding inhibitor-like 5
mm9_v1_chr5_+_143178045_143178121	0.0215399	RUNX1..3.p2	NM_146257|Slc29a4|243328|solute carrier family 29 (nucleoside transporters), member 4	BC025599|Slc29a4|243328|solute carrier family 29 (nucleoside transporters), member 4
mm9_v1_chr17_-_23810808_23810848	0.0215135	RUNX1..3.p2	AK089746|Thoc6|386612|THO complex 6 homolog (Drosophila)	BC089551|Thoc6|386612|THO complex 6 homolog (Drosophila)
mm9_v1_chr5_+_145844689_145844781	0.0215133	RUNX1..3.p2	AB024984|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	NM_019767|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK003986|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK145663|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK076107|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	BC001988|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK002475|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A
mm9_v1_chr15_+_54577256_54577521	0.0214784	RUNX1..3.p2	AK081944|Nov|18133|nephroblastoma overexpressed gene	AK081310|Nov|18133|nephroblastoma overexpressed gene	AK136407|Nov|18133|nephroblastoma overexpressed gene	AK155048|Nov|18133|nephroblastoma overexpressed gene	BC003774|Nov|18133|nephroblastoma overexpressed gene	NM_010930|Nov|18133|nephroblastoma overexpressed gene	X96585|Nov|18133|nephroblastoma overexpressed gene	AK039481|Nov|18133|nephroblastoma overexpressed gene	Y09257|Nov|18133|nephroblastoma overexpressed gene
mm9_v1_chr15_-_39688931_39689018	0.0213868	RUNX1..3.p2	AF227731|Dpys|64705|dihydropyrimidinase	BC037086|Dpys|64705|dihydropyrimidinase	AF249296|Dpys|64705|dihydropyrimidinase	AK004899|Dpys|64705|dihydropyrimidinase	AK004822|Dpys|64705|dihydropyrimidinase	NM_001164466|Dpys|64705|dihydropyrimidinase	NM_022722|Dpys|64705|dihydropyrimidinase
mm9_v1_chr4_-_126106632_126106717	0.0213199	RUNX1..3.p2	BC137964|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	BC145061|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	BC145063|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AB081473|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK042049|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK172226|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3
mm9_v1_chr1_-_121809744_121809749	0.0212987	RUNX1..3.p2	BC094344|Tmem177|66343|transmembrane protein 177	NM_175106|Tmem177|66343|transmembrane protein 177	AK009043|Tmem177|66343|transmembrane protein 177	AK076108|Tmem177|66343|transmembrane protein 177
mm9_v1_chr7_-_16807341_16807387	0.0211836	RUNX1..3.p2	BC080856|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK129062|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK004733|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	NM_027883|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm9_v1_chr2_-_120434984_120435243	0.0211453	RUNX1..3.p2	AK003592|Lrrc57|66606|leucine rich repeat containing 57	AK169249|Lrrc57|66606|leucine rich repeat containing 57	BC034894|Lrrc57|66606|leucine rich repeat containing 57	AK003037|Lrrc57|66606|leucine rich repeat containing 57	NM_025657|Lrrc57|66606|leucine rich repeat containing 57	AK012637|Lrrc57|66606|leucine rich repeat containing 57	AK033084|Lrrc57|66606|leucine rich repeat containing 57	AK134971|Lrrc57|66606|leucine rich repeat containing 57	NM_001159612|Lrrc57|66606|leucine rich repeat containing 57	AK015684|Lrrc57|66606|leucine rich repeat containing 57	AK019566|Lrrc57|66606|leucine rich repeat containing 57	NM_001159609|Lrrc57|66606|leucine rich repeat containing 57	NM_001159610|Lrrc57|66606|leucine rich repeat containing 57
mm9_v1_chr3_-_130433225_130433274	0.0210856	RUNX1..3.p2	BC058118|Rpl34|68436|ribosomal protein L34	NM_026724|Rpl34|68436|ribosomal protein L34	BC100360|Rpl34-ps1|619547|ribosomal protein L34, pseudogene 1	AK003177|Rpl34|68436|ribosomal protein L34	AK146252|Rpl34|68436|ribosomal protein L34	BC086936|Rpl34|68436|ribosomal protein L34
mm9_v1_chr15_+_30102710_30102805	0.0210042	RUNX1..3.p2	BC138260|Ctnnd2|18163|catenin (cadherin associated protein), delta 2	BC138261|Ctnnd2|18163|catenin (cadherin associated protein), delta 2	BC145217|Ctnnd2|18163|catenin (cadherin associated protein), delta 2
mm9_v1_chr17_+_27166203_27166342	0.0209911	RUNX1..3.p2	AY141192|Ggnbp1|70772|gametogenetin binding protein 1	NM_027544|Ggnbp1|70772|gametogenetin binding protein 1	AB250379|Ggnbp1|70772|gametogenetin binding protein 1	AK077129|Ggnbp1|70772|gametogenetin binding protein 1	BC049764|Ggnbp1|70772|gametogenetin binding protein 1
mm9_v1_chr5_-_92391581_92391802	0.0208255	RUNX1..3.p2	AK015870|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AF305423|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AK084295|Thap6|381650|THAP domain containing 6	AK018364|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AF276959|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AF071222|Rchy1|68098|ring finger and CHY zinc finger domain containing 1	AK018488|Rchy1|68098|ring finger and CHY zinc finger domain containing 1
mm9_v1_chr7_+_123175492_123175501	0.0207526	RUNX1..3.p2	AK003497|1110006G14Rik|68469|RIKEN cDNA 1110006G14 gene
mm9_v1_chr1_+_98920975_98921101	0.0206839	RUNX1..3.p2	
mm9_v1_chr4_-_141161882_141162024	0.0206472	RUNX1..3.p2	AK170440|Fblim1|74202|filamin binding LIM protein 1	AK154680|Fblim1|74202|filamin binding LIM protein 1	AK163587|Fblim1|74202|filamin binding LIM protein 1	AK170151|Fblim1|74202|filamin binding LIM protein 1	NM_133754|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr7_+_80885175_80885216	0.0205517	RUNX1..3.p2	NM_001162532|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr19_-_6067723_6067866	0.0204487	RUNX1..3.p2	AF480070|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK039028|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK155475|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK014166|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK134512|Tm7sf2|73166|transmembrane 7 superfamily member 2	BC014769|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK037325|Tm7sf2|73166|transmembrane 7 superfamily member 2	NM_028454|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK040016|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK043687|Tm7sf2|73166|transmembrane 7 superfamily member 2
mm9_v1_chr7_+_3655602_3655652	0.0203304	RUNX1..3.p2	AK081889|Rps9|76846|ribosomal protein S9	AK151621|Rps9|76846|ribosomal protein S9	AK050591|Rps9|76846|ribosomal protein S9	AK150988|Rps9|76846|ribosomal protein S9	NM_029767|Rps9|76846|ribosomal protein S9	AK151029|Rps9|76846|ribosomal protein S9	AK150800|Rps9|76846|ribosomal protein S9	BC031746|Rps9|76846|ribosomal protein S9
mm9_v1_chr10_-_80555271_80555374	0.0203027	RUNX1..3.p2	AK050186|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	AF392874|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	BC028820|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr4_+_155383386_155383404	0.0202575	RUNX1..3.p2	
mm9_v1_chr3_-_107563372_107563394	0.0201505	RUNX1..3.p2	AK154261|Csf1|12977|colony stimulating factor 1 (macrophage)	NM_001113529|Csf1|12977|colony stimulating factor 1 (macrophage)	NM_001113530|Csf1|12977|colony stimulating factor 1 (macrophage)	NM_007778|Csf1|12977|colony stimulating factor 1 (macrophage)
mm9_v1_chr9_-_110556645_110556664	0.0201194	RUNX1..3.p2	BC157956|Nbeal2|235627|neurobeachin-like 2	BC172118|Nbeal2|235627|neurobeachin-like 2	NM_183276|Nbeal2|235627|neurobeachin-like 2
mm9_v1_chr17_-_63230665_63230665	0.0199785	RUNX1..3.p2	BC040218|Efna5|13640|ephrin A5	NM_010109|Efna5|13640|ephrin A5	NM_207654|Efna5|13640|ephrin A5
mm9_v1_chrX_+_98449866_98450159	0.0198762	RUNX1..3.p2	AF114260|Foxo4|54601|forkhead box O4	NM_018789|Foxo4|54601|forkhead box O4	AK157830|Foxo4|54601|forkhead box O4	BC099460|Foxo4|54601|forkhead box O4	BC139275|Foxo4|54601|forkhead box O4	BC139304|Foxo4|54601|forkhead box O4	AB032770|Foxo4|54601|forkhead box O4	AB221664|Foxo4|54601|forkhead box O4
mm9_v1_chr1_+_135142673_135142702	0.0196657	RUNX1..3.p2	NM_001160268|Plekha6|240753|pleckstrin homology domain containing, family A member 6	NM_182930|Plekha6|240753|pleckstrin homology domain containing, family A member 6	BC054547|Plekha6|240753|pleckstrin homology domain containing, family A member 6	AK173074|Plekha6|240753|pleckstrin homology domain containing, family A member 6
mm9_v1_chr10_+_51246145_51246210	0.0196531	RUNX1..3.p2	
mm9_v1_chr11_-_51449228_51449289	0.0195863	RUNX1..3.p2	BC016075|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chr15_+_76730338_76730405	0.0195842	RUNX1..3.p2	AK013148|Commd5|66398|COMM domain containing 5	AK010045|Commd5|66398|COMM domain containing 5	NM_025536|Commd5|66398|COMM domain containing 5	BC025891|Commd5|66398|COMM domain containing 5
mm9_v1_chr4_-_115726385_115726456	0.0192243	RUNX1..3.p2	BC024628|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chr2_+_30122046_30122048	0.0191848	RUNX1..3.p2	AK138607|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1
mm9_v1_chr4_-_126106749_126106807	0.0191626	RUNX1..3.p2	AK035042|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK083652|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK171118|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK154436|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	NM_153402|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3
mm9_v1_chr1_+_9591347_9591354	0.0191447	RUNX1..3.p2	AK043759|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene	NM_178399|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr8_+_87213209_87213224	0.0191188	RUNX1..3.p2	AK032945|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr16_+_33829715_33830005	0.0190576	RUNX1..3.p2	AF022110|Itgb5|16419|integrin beta 5	NM_001145884|Itgb5|16419|integrin beta 5	NM_010580|Itgb5|16419|integrin beta 5	BC058246|Itgb5|16419|integrin beta 5	AK143532|Itgb5|16419|integrin beta 5	AK140251|Itgb5|16419|integrin beta 5	BC046280|Itgb5|16419|integrin beta 5	AF043256|Itgb5|16419|integrin beta 5	AF043257|Itgb5|16419|integrin beta 5	AK087476|Itgb5|16419|integrin beta 5
mm9_v1_chr8_+_126042733_126042838	0.0189832	RUNX1..3.p2	U19859|Gas8|104346|growth arrest specific 8	AY692443|Gas8|104346|growth arrest specific 8	NM_018855|Gas8|104346|growth arrest specific 8	AK140135|Gas8|104346|growth arrest specific 8	BC003779|Gas8|104346|growth arrest specific 8	DQ189098|Gas8|104346|growth arrest specific 8
mm9_v1_chr10_-_124826429_124826542	0.0189339	RUNX1..3.p2	
mm9_v1_chr5_-_143942408_143942453	0.01891	RUNX1..3.p2	AF226870|Rbak|57782|RB-associated KRAB repressor	NM_001045482|Rbak|57782|RB-associated KRAB repressor	NM_021326|Rbak|57782|RB-associated KRAB repressor	AK051009|Rbak|57782|RB-associated KRAB repressor
mm9_v1_chrX_-_103680566_103680612	0.0188543	RUNX1..3.p2	BC085176|Fndc3c1|333564|fibronectin type III domain containing 3C1	BC076625|Fndc3c1|333564|fibronectin type III domain containing 3C1	NM_001007580|Fndc3c1|333564|fibronectin type III domain containing 3C1	DQ192038|Fndc3c1|333564|fibronectin type III domain containing 3C1
mm9_v1_chr1_+_193149772_193149878	0.018795	RUNX1..3.p2	AK049641|Tmem206|66950|transmembrane protein 206	AK031270|Tmem206|66950|transmembrane protein 206	AK012107|Tmem206|66950|transmembrane protein 206	AK009526|Tmem206|66950|transmembrane protein 206	AK044482|Tmem206|66950|transmembrane protein 206	NM_025864|Tmem206|66950|transmembrane protein 206	BC027151|Tmem206|66950|transmembrane protein 206
mm9_v1_chr2_-_30683705_30683840	0.0186188	RUNX1..3.p2	AY665653|Asb6|72323|ankyrin repeat and SOCS box-containing 6	AK088890|Asb6|72323|ankyrin repeat and SOCS box-containing 6	BC085485|Asb6|72323|ankyrin repeat and SOCS box-containing 6	BC019192|Asb6|72323|ankyrin repeat and SOCS box-containing 6	AK010909|Asb6|72323|ankyrin repeat and SOCS box-containing 6	AK049312|Asb6|72323|ankyrin repeat and SOCS box-containing 6	NM_133346|Asb6|72323|ankyrin repeat and SOCS box-containing 6
mm9_v1_chr12_+_109661287_109661388	0.0186127	RUNX1..3.p2	AK044662|Eml1|68519|echinoderm microtubule associated protein like 1	BC079582|Eml1|68519|echinoderm microtubule associated protein like 1
mm9_v1_chr18_+_32399979_32400013	0.0185842	RUNX1..3.p2	AK151188|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	AK152347|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	AK152988|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	AK154745|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	NM_133658|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	S71186|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	BC026575|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	BC022956|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	BC016595|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm9_v1_chr19_+_10978153_10978193	0.0185755	RUNX1..3.p2	AK206563|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	AK214592|Prpf19|28000|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)
mm9_v1_chr4_+_155367248_155367498	0.0184842	RUNX1..3.p2	AK163400|Sdf4|20318|stromal cell derived factor 4	AK167113|Sdf4|20318|stromal cell derived factor 4	AK157860|Sdf4|20318|stromal cell derived factor 4	U45978|Sdf4|20318|stromal cell derived factor 4	AK014418|Sdf4|20318|stromal cell derived factor 4
mm9_v1_chr17_-_37095372_37095414	0.0183955	RUNX1..3.p2	AK003714|Znrd1|66136|zinc ribbon domain containing, 1	NM_023162|Znrd1|66136|zinc ribbon domain containing, 1	BC043016|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr1_+_95721816_95721878	0.0183655	RUNX1..3.p2	AK170226|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	NM_178882|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	AK141691|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	BC023277|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	AK088200|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	AK088554|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	BC117794|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase
mm9_v1_chr4_-_43666412_43666469	0.0181094	RUNX1..3.p2	AK132968|Spag8|433700|sperm associated antigen 8	AY769082|Spag8|433700|sperm associated antigen 8	NM_001007463|Spag8|433700|sperm associated antigen 8	BC150868|Spag8|433700|sperm associated antigen 8
mm9_v1_chr8_+_81552335_81552485	0.0180594	RUNX1..3.p2	BC094552|Zfp827|622675|zinc finger protein 827	NM_178267|Zfp827|622675|zinc finger protein 827	BC151183|Zfp827|622675|zinc finger protein 827	AK154905|Zfp827|622675|zinc finger protein 827
mm9_v1_chr7_+_30768973_30768975	0.018001	RUNX1..3.p2	AK148548|Zfp568|243905|zinc finger protein 568	AK166471|Zfp568|243905|zinc finger protein 568	NM_001033355|Zfp568|243905|zinc finger protein 568	NM_001167872|Zfp568|243905|zinc finger protein 568	NM_001167873|Zfp568|243905|zinc finger protein 568	AK143471|Zfp568|243905|zinc finger protein 568
mm9_v1_chr13_-_100972022_100972078	0.0178267	RUNX1..3.p2	AF102871|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF135489|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF135490|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF381770|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AY147000|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AY147001|Naip2|17948|NLR family, apoptosis inhibitory protein 2	NM_001126182|Naip2|17948|NLR family, apoptosis inhibitory protein 2	NM_010872|Naip2|17948|NLR family, apoptosis inhibitory protein 2
mm9_v1_chr6_-_54767627_54767644	0.0177566	RUNX1..3.p2	AK011926|2610209C05Rik|70449|RIKEN cDNA 2610209C05 gene
mm9_v1_chr13_+_95746390_95746408	0.0177231	RUNX1..3.p2	BC138095|Wdr41|218460|WD repeat domain 41	BC145144|Wdr41|218460|WD repeat domain 41
mm9_v1_chr19_+_13009228_13009229	0.0176879	RUNX1..3.p2	BC133705|Olfr1449|258300|olfactory receptor 1449	NM_146303|Olfr1449|258300|olfactory receptor 1449
mm9_v1_chr7_+_110368156_110368233	0.017512	RUNX1..3.p2	BC141016|Olfr594|258246|olfactory receptor 594	NM_207143|Olfr594|258246|olfactory receptor 594
mm9_v1_chr9_+_99143756_99143900	0.0174905	RUNX1..3.p2	AK021095|Cep70|68121|centrosomal protein 70	AK020622|Cep70|68121|centrosomal protein 70	AF242319|Cep70|68121|centrosomal protein 70	AK049326|Cep70|68121|centrosomal protein 70	AK133048|Cep70|68121|centrosomal protein 70	BC071260|Cep70|68121|centrosomal protein 70	NM_023873|Cep70|68121|centrosomal protein 70	BC050819|Cep70|68121|centrosomal protein 70	AK020174|Cep70|68121|centrosomal protein 70
mm9_v1_chr13_+_42804911_42805054	0.017487	RUNX1..3.p2	BC048407|Phactr1|218194|phosphatase and actin regulator 1	BC061691|Phactr1|218194|phosphatase and actin regulator 1	NM_001005740|Phactr1|218194|phosphatase and actin regulator 1	AK048208|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr7_+_52253028_52253155	0.0174651	RUNX1..3.p2	AK013944|Irf3|54131|interferon regulatory factor 3	NM_016849|Irf3|54131|interferon regulatory factor 3	AK146378|Irf3|54131|interferon regulatory factor 3	AK151750|Irf3|54131|interferon regulatory factor 3	AK152689|Irf3|54131|interferon regulatory factor 3	U75839|Irf3|54131|interferon regulatory factor 3	AK145977|Irf3|54131|interferon regulatory factor 3	BC023244|Irf3|54131|interferon regulatory factor 3	AK050570|Irf3|54131|interferon regulatory factor 3	BC003233|Irf3|54131|interferon regulatory factor 3	BC050882|Irf3|54131|interferon regulatory factor 3
mm9_v1_chr11_+_67779939_67779975	0.0173839	RUNX1..3.p2	AK003297|Stx8|55943|syntaxin 8	BC048479|Stx8|55943|syntaxin 8	BC061118|Stx8|55943|syntaxin 8	AK016271|Stx8|55943|syntaxin 8	AK011376|Stx8|55943|syntaxin 8
mm9_v1_chr19_-_5366324_5366346	0.0172206	RUNX1..3.p2	AK010257|Banf1|23825|barrier to autointegration factor 1	NM_001038231|Banf1|23825|barrier to autointegration factor 1
mm9_v1_chr4_-_153400020_153400152	0.0172	RUNX1..3.p2	AK158109|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	BC055944|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	AK165247|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	AK167398|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	AK028394|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	AK012228|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	NM_001163721|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene	NM_001163722|1190007F08Rik|68859|RIKEN cDNA 1190007F08 gene
mm9_v1_chrX_-_46641408_46641425	0.0171791	RUNX1..3.p2	AK028343|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK034058|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK041822|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	NM_145951|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2
mm9_v1_chr9_-_109986879_109987026	0.0171261	RUNX1..3.p2	AK193613|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr7_-_149246757_149246816	0.0170764	RUNX1..3.p2	AK158674|2700078K21Rik|101513|RIKEN cDNA 2700078K21 gene
mm9_v1_chr17_+_47730733_47730784	0.0169572	RUNX1..3.p2	AK213147|Ccnd3|12445|cyclin D3
mm9_v1_chr15_+_38944419_38944480	0.0169389	RUNX1..3.p2	NM_198606|Dcaf13|223499|DDB1 and CUL4 associated factor 13	BC060375|Dcaf13|223499|DDB1 and CUL4 associated factor 13
mm9_v1_chr8_+_108378977_108379101	0.0168828	RUNX1..3.p2	NM_021513|Thap11|59016|THAP domain containing 11	AK166109|Thap11|59016|THAP domain containing 11	AK170457|Thap11|59016|THAP domain containing 11	AB041579|Thap11|59016|THAP domain containing 11	AK165981|Thap11|59016|THAP domain containing 11	BC138966|Thap11|59016|THAP domain containing 11	BC138987|Thap11|59016|THAP domain containing 11
mm9_v1_chr8_+_12984287_12984308	0.0168238	RUNX1..3.p2	AK147252|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr12_+_53198729_53198769	0.016751	RUNX1..3.p2	NM_029760|Nubpl|76826|nucleotide binding protein-like	AK152377|Nubpl|76826|nucleotide binding protein-like	AK083643|Nubpl|76826|nucleotide binding protein-like	BC062175|Nubpl|76826|nucleotide binding protein-like	AK010827|Nubpl|76826|nucleotide binding protein-like	AK141257|Nubpl|76826|nucleotide binding protein-like
mm9_v1_chr3_+_102862151_102862295	0.0167265	RUNX1..3.p2	X13664|Nras|18176|neuroblastoma ras oncogene	NM_010937|Nras|18176|neuroblastoma ras oncogene	AK011704|Nras|18176|neuroblastoma ras oncogene	AK165960|Nras|18176|neuroblastoma ras oncogene	AK150357|Nras|18176|neuroblastoma ras oncogene	BC058755|Nras|18176|neuroblastoma ras oncogene	BC014704|Nras|18176|neuroblastoma ras oncogene	BC051443|Nras|18176|neuroblastoma ras oncogene
mm9_v1_chr19_-_47125334_47125422	0.0166462	RUNX1..3.p2	BC016195|Pcgf6|71041|polycomb group ring finger 6	NM_027654|Pcgf6|71041|polycomb group ring finger 6	AK016709|Pcgf6|71041|polycomb group ring finger 6	AB047007|Pcgf6|71041|polycomb group ring finger 6	BC089460|Pcgf6|71041|polycomb group ring finger 6	AK132448|Pcgf6|71041|polycomb group ring finger 6	AK155067|Pcgf6|71041|polycomb group ring finger 6
mm9_v1_chr4_+_154843223_154843242	0.0166396	RUNX1..3.p2	BC144992|Tmem52|69671|transmembrane protein 52	NM_027161|Tmem52|69671|transmembrane protein 52	BC150685|Tmem52|69671|transmembrane protein 52	AK009779|Tmem52|69671|transmembrane protein 52
mm9_v1_chr9_+_14664653_14664697	0.0166192	RUNX1..3.p2	AK035356|Gpr83|14608|G protein-coupled receptor 83	AK041527|Gpr83|14608|G protein-coupled receptor 83	AK081276|Gpr83|14608|G protein-coupled receptor 83	M80481|Gpr83|14608|G protein-coupled receptor 83	NM_010287|Gpr83|14608|G protein-coupled receptor 83
mm9_v1_chr13_-_67461473_67461507	0.0166007	RUNX1..3.p2	BC141233|Zfp953|629016|zinc finger protein 953	AK143165|Zfp953|629016|zinc finger protein 953	NM_001038651|Zfp953|629016|zinc finger protein 953
mm9_v1_chr7_-_30033397_30033450	0.0165188	RUNX1..3.p2	AK033738|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene	BC086934|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene	AK008617|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene
mm9_v1_chr7_+_127821167_127821282	0.016502	RUNX1..3.p2	BC030336|BC030336|233812|cDNA sequence BC030336	AK052350|BC030336|233812|cDNA sequence BC030336
mm9_v1_chr3_-_94946256_94946295	0.016418	RUNX1..3.p2	BC055879|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2	BC094616|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2	AK007540|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2	NM_027206|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2
mm9_v1_chr1_-_93829376_93829378	0.0163217	RUNX1..3.p2	AK170461|Hdac4|208727|histone deacetylase 4
mm9_v1_chr6_+_85537524_85537524	0.0162913	RUNX1..3.p2	AF425257|Alms1|236266|Alstrom syndrome 1 homolog (human)	NM_145223|Alms1|236266|Alstrom syndrome 1 homolog (human)
mm9_v1_chr5_-_115750913_115750938	0.0162072	RUNX1..3.p2	BC008106|Dynll1|56455|dynein light chain LC8-type 1	BC034258|Dynll1|56455|dynein light chain LC8-type 1	AF020185|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr2_-_110203138_110203154	0.0161583	RUNX1..3.p2	BC027250|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK003790|Fibin|67606|fin bud initiation factor homolog (zebrafish)	NM_026271|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr11_-_77979070_77979090	0.0161275	RUNX1..3.p2	AK046015|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr9_+_14305055_14305063	0.0160718	RUNX1..3.p2	NM_023153|Cwc15|66070|CWC15 homolog (S. cerevisiae)
mm9_v1_chr2_+_148498350_148498409	0.016028	RUNX1..3.p2	NM_019761|Nxt1|56488|NTF2-related export protein 1	NM_001110159|Nxt1|56488|NTF2-related export protein 1	AK003254|Nxt1|56488|NTF2-related export protein 1	BC023672|Nxt1|56488|NTF2-related export protein 1	AK168314|Nxt1|56488|NTF2-related export protein 1	AF156958|Nxt1|56488|NTF2-related export protein 1
mm9_v1_chr4_-_93002201_93002224	0.016017	RUNX1..3.p2	AY546089|Tusc1|69136|tumor suppressor candidate 1	NM_026954|Tusc1|69136|tumor suppressor candidate 1
mm9_v1_chr5_+_67651890_67652024	0.015973	RUNX1..3.p2	AK012413|Tmem33|67878|transmembrane protein 33	NM_028975|Tmem33|67878|transmembrane protein 33	NM_030108|Tmem33|67878|transmembrane protein 33	AK032555|Tmem33|67878|transmembrane protein 33	AK005493|Tmem33|67878|transmembrane protein 33	AK007750|Tmem33|67878|transmembrane protein 33	AK017281|Tmem33|67878|transmembrane protein 33	AK153441|Tmem33|67878|transmembrane protein 33	AK007607|Tmem33|67878|transmembrane protein 33	BC005562|Tmem33|67878|transmembrane protein 33	AK165369|Tmem33|67878|transmembrane protein 33
mm9_v1_chr5_+_130371592_130371637	0.015959	RUNX1..3.p2	AK010551|Scand3|71970|SCAN domain containing 3	NM_183088|Scand3|71970|SCAN domain containing 3	BC137610|Scand3|71970|SCAN domain containing 3
mm9_v1_chr7_-_28835041_28835115	0.0159113	RUNX1..3.p2	BC012708|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167041|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	BC092265|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	L76223|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK150989|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160718|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167528|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169224|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK077507|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160644|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169244|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK050677|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK153991|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	NM_011874|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4
mm9_v1_chr3_-_90269648_90269831	0.0158486	RUNX1..3.p2	BC139767|Npr1|18160|natriuretic peptide receptor 1	BC110659|Npr1|18160|natriuretic peptide receptor 1	NM_008727|Npr1|18160|natriuretic peptide receptor 1
mm9_v1_chr5_+_135462067_135462135	0.0158371	RUNX1..3.p2	AK002672|Cldn3|12739|claudin 3	NM_009902|Cldn3|12739|claudin 3	AK006514|Cldn3|12739|claudin 3	AK012677|Cldn3|12739|claudin 3
mm9_v1_chr4_-_117564594_117564651	0.0158031	RUNX1..3.p2	BC031124|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK018638|Dph2|67728|DPH2 homolog (S. cerevisiae)	NM_026344|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK011199|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK051026|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK080747|Dph2|67728|DPH2 homolog (S. cerevisiae)	BC014746|Dph2|67728|DPH2 homolog (S. cerevisiae)
mm9_v1_chr8_-_90483392_90483493	0.0157629	RUNX1..3.p2	AY256893|Zfp423|94187|zinc finger protein 423	AK122365|Zfp423|94187|zinc finger protein 423	NM_033327|Zfp423|94187|zinc finger protein 423
mm9_v1_chr18_-_35821788_35821845	0.0157309	RUNX1..3.p2	BC060950|Spata24|71242|spermatogenesis associated 24	AK017218|Spata24|71242|spermatogenesis associated 24	AK016341|Spata24|71242|spermatogenesis associated 24	AK012241|Spata24|71242|spermatogenesis associated 24	AY730532|Spata24|71242|spermatogenesis associated 24	NM_027733|Spata24|71242|spermatogenesis associated 24	NM_029485|Spata24|71242|spermatogenesis associated 24
mm9_v1_chr13_+_31650192_31650305	0.0155426	RUNX1..3.p2	BC047155|Foxq1|15220|forkhead box Q1
mm9_v1_chr14_-_73109609_73109649	0.0154764	RUNX1..3.p2	BC144880|Fndc3a|319448|fibronectin type III domain containing 3A	AK154756|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr8_+_107793700_107793773	0.0154197	RUNX1..3.p2	BC138130|Hsf4|26386|heat shock transcription factor 4	BC145153|Hsf4|26386|heat shock transcription factor 4	BC145154|Hsf4|26386|heat shock transcription factor 4	AK148056|Hsf4|26386|heat shock transcription factor 4	AB029349|Hsf4|26386|heat shock transcription factor 4	AB029350|Hsf4|26386|heat shock transcription factor 4	AF160966|Hsf4|26386|heat shock transcription factor 4	NM_011939|Hsf4|26386|heat shock transcription factor 4
mm9_v1_chr18_+_62339779_62339836	0.0153659	RUNX1..3.p2	AK042188|Gm9949|225609|predicted gene 9949
mm9_v1_chr18_+_37454493_37454629	0.0153645	RUNX1..3.p2	NM_053127|Pcdhb2|93873|protocadherin beta 2	BC021789|Pcdhb2|93873|protocadherin beta 2	BC141154|Pcdhb2|93873|protocadherin beta 2	AY013781|Pcdhb2|93873|protocadherin beta 2
mm9_v1_chr9_-_106691395_106691543	0.0153072	RUNX1..3.p2	BC133714|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	AK155151|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	AK090250|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	AK083903|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	NM_030730|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)
mm9_v1_chr17_+_26339936_26339946	0.015122	RUNX1..3.p2	AK039314|Rgs11|50782|regulator of G-protein signaling 11	BC037655|Rgs11|50782|regulator of G-protein signaling 11
mm9_v1_chr8_-_72438496_72438584	0.0151152	RUNX1..3.p2	BC019178|Gatad2a|234366|GATA zinc finger domain containing 2A	AK189334|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr11_+_70452623_70452651	0.015082	RUNX1..3.p2	NM_010326|Gp1ba|14723|glycoprotein 1b, alpha polypeptide	BC137765|Gp1ba|14723|glycoprotein 1b, alpha polypeptide
mm9_v1_chr1_-_75274890_75274917	0.0148243	RUNX1..3.p2	FJ621497|Resp18|19711|regulated endocrine-specific protein 18	AK019440|Resp18|19711|regulated endocrine-specific protein 18	AK012477|Resp18|19711|regulated endocrine-specific protein 18	BC027535|Resp18|19711|regulated endocrine-specific protein 18
mm9_v1_chr6_-_72908741_72908741	0.0147623	RUNX1..3.p2	NM_001190327|Tmsb10|19240|thymosin, beta 10
mm9_v1_chr13_-_93564652_93564772	0.0146036	RUNX1..3.p2	BC139414|Thbs4|21828|thrombospondin 4	AF102887|Thbs4|21828|thrombospondin 4	NM_011582|Thbs4|21828|thrombospondin 4
mm9_v1_chr12_-_55896488_55896574	0.0144636	RUNX1..3.p2	BC025911|Snx6|72183|sorting nexin 6
mm9_v1_chr6_-_33010151_33010266	0.0144248	RUNX1..3.p2	AK003519|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	NM_025336|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC032987|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK145337|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK006643|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC021941|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK050063|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002263|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002889|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3
mm9_v1_chr2_-_93997994_93998073	0.0144031	RUNX1..3.p2	BC037620|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC090659|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC010749|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AF064635|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK076088|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK150849|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK152489|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK166027|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK081869|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK082715|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK088521|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK167908|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK078841|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	NM_019657|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12
mm9_v1_chr2_+_91105271_91105495	0.0143475	RUNX1..3.p2	NM_001166024|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	NM_023854|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	BC005495|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK149837|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	EF437354|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK009565|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK169144|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AF229439|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK168489|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2
mm9_v1_chr8_+_107800316_107800347	0.0143364	RUNX1..3.p2	AK079536|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	BC027290|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AY459322|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AK053846|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	NM_030152|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm9_v1_chr14_+_29318658_29318741	0.0143259	RUNX1..3.p2	NM_009524|Wnt5a|22418|wingless-related MMTV integration site 5A	AK031597|Wnt5a|22418|wingless-related MMTV integration site 5A	M89798|Wnt5a|22418|wingless-related MMTV integration site 5A
mm9_v1_chr6_+_30758582_30758676	0.0141524	RUNX1..3.p2	AK014219|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr16_-_85173764_85173823	0.0141404	RUNX1..3.p2	AK218334|App|11820|amyloid beta (A4) precursor protein	AY267348|App|11820|amyloid beta (A4) precursor protein	AK148439|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr19_+_9026569_9026592	0.0140062	RUNX1..3.p2	
mm9_v1_chr9_+_119803988_119804030	0.0139991	RUNX1..3.p2	BC050106|Wdr48|67561|WD repeat domain 48	AK031244|Wdr48|67561|WD repeat domain 48	BC062967|Wdr48|67561|WD repeat domain 48	AK018396|Wdr48|67561|WD repeat domain 48	AK030041|Wdr48|67561|WD repeat domain 48	AK035273|Wdr48|67561|WD repeat domain 48	AK035864|Wdr48|67561|WD repeat domain 48	AK043970|Wdr48|67561|WD repeat domain 48	AK128953|Wdr48|67561|WD repeat domain 48	NM_026236|Wdr48|67561|WD repeat domain 48	AK033631|Wdr48|67561|WD repeat domain 48	AK012599|Wdr48|67561|WD repeat domain 48	BC048155|Wdr48|67561|WD repeat domain 48
mm9_v1_chr10_-_80464109_80464109	0.0139721	RUNX1..3.p2	AK158963|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	NM_001038655|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7
mm9_v1_chr7_-_54387695_54387755	0.0138963	RUNX1..3.p2	BC057339|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	BC051975|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5	AK038416|Ptpn5|19259|protein tyrosine phosphatase, non-receptor type 5
mm9_v1_chr6_+_48995303_48995460	0.0138559	RUNX1..3.p2	AK179971|Gpnmb|93695|glycoprotein (transmembrane) nmb
mm9_v1_chr11_+_59320146_59320183	0.0138217	RUNX1..3.p2	AK051100|4933439C10Rik|74476|RIKEN cDNA 4933439C10 gene
mm9_v1_chr11_-_116704762_116704824	0.0138038	RUNX1..3.p2	BC056629|Jmjd6|107817|jumonji domain containing 6	EF527404|Jmjd6|107817|jumonji domain containing 6	NM_033398|Jmjd6|107817|jumonji domain containing 6
mm9_v1_chr17_-_65962616_65962686	0.0137991	RUNX1..3.p2	AF115503|Vapa|30960|vesicle-associated membrane protein, associated protein A	AK012357|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr16_+_44347501_44347594	0.0137251	RUNX1..3.p2	NM_144550|Spice1|212514|spindle and centriole associated protein 1	AK165031|Spice1|212514|spindle and centriole associated protein 1	BC052381|Spice1|212514|spindle and centriole associated protein 1	BC056960|Spice1|212514|spindle and centriole associated protein 1	AK048789|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr18_+_21119972_21120137	0.0136616	RUNX1..3.p2	AK016103|Rnf125|67664|ring finger protein 125	AB259692|Rnf125|67664|ring finger protein 125
mm9_v1_chr5_+_125048757_125048805	0.0135396	RUNX1..3.p2	AK031829|Tctn2|67978|tectonic family member 2	NM_026486|Tctn2|67978|tectonic family member 2	DQ278869|Tctn2|67978|tectonic family member 2	AK012720|Tctn2|67978|tectonic family member 2	AK014476|Tctn2|67978|tectonic family member 2	AK165102|Tctn2|67978|tectonic family member 2	AK083080|Tctn2|67978|tectonic family member 2	AK032378|Tctn2|67978|tectonic family member 2	AK087856|Tctn2|67978|tectonic family member 2	BC058375|Tctn2|67978|tectonic family member 2
mm9_v1_chr17_+_35137851_35137869	0.0135288	RUNX1..3.p2	NM_011690|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr4_-_40704878_40704878	0.0133691	RUNX1..3.p2	BC057446|Smu1|74255|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
mm9_v1_chr2_+_179777418_179777493	0.0133096	RUNX1..3.p2	AK173004|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK054560|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK038669|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr4_+_95246111_95246193	0.0132675	RUNX1..3.p2	NM_029347|Fggy|75578|FGGY carbohydrate kinase domain containing	AK085534|Fggy|75578|FGGY carbohydrate kinase domain containing	BC031708|Fggy|75578|FGGY carbohydrate kinase domain containing
mm9_v1_chr3_+_105261699_105261733	0.013264	RUNX1..3.p2	BC141097|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	BC141098|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107781|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107782|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	NM_019931|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr2_+_180663727_180663803	0.0132404	RUNX1..3.p2	AK053463|Birc7|329581|baculoviral IAP repeat-containing 7 (livin)	NM_001163247|Birc7|329581|baculoviral IAP repeat-containing 7 (livin)	BC107260|Birc7|329581|baculoviral IAP repeat-containing 7 (livin)	BC125013|Birc7|329581|baculoviral IAP repeat-containing 7 (livin)
mm9_v1_chr2_-_3249825_3249918	0.0131233	RUNX1..3.p2	AK139023|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)	AK049133|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)	BC051448|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)	AK087782|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)	NM_001013376|Rpp38|227522|ribonuclease P/MRP 38 subunit (human)
mm9_v1_chr2_-_119034488_119034539	0.0130987	RUNX1..3.p2	AK077385|Dnajc17|69408|DnaJ (Hsp40) homolog, subfamily C, member 17	BC013487|Dnajc17|69408|DnaJ (Hsp40) homolog, subfamily C, member 17	NM_139139|Dnajc17|69408|DnaJ (Hsp40) homolog, subfamily C, member 17
mm9_v1_chr13_+_14156038_14156092	0.0129349	RUNX1..3.p2	AK136105|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK041414|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_194262|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_198122|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK161669|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK031062|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)
mm9_v1_chr3_-_75760843_75760893	0.0128292	RUNX1..3.p2	AK080456|Golim4|73124|golgi integral membrane protein 4	AK033730|Golim4|73124|golgi integral membrane protein 4	AK048434|Golim4|73124|golgi integral membrane protein 4	AK078928|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr3_-_88100759_88100800	0.0127549	RUNX1..3.p2	AK006195|1700021C14Rik|76927|RIKEN cDNA 1700021C14 gene	NM_029801|1700021C14Rik|76927|RIKEN cDNA 1700021C14 gene	BC107298|1700021C14Rik|76927|RIKEN cDNA 1700021C14 gene
mm9_v1_chr7_+_73194834_73194897	0.0127435	RUNX1..3.p2	AF008223|Pcsk6|18553|proprotein convertase subtilisin/kexin type 6
mm9_v1_chr9_-_18278002_18278002	0.0126033	RUNX1..3.p2	NM_028935|Zfp558|72230|zinc finger protein 558
mm9_v1_chrX_-_39265047_39265129	0.0125905	RUNX1..3.p2	AK140950|Thoc2|331401|THO complex 2	AK138023|Thoc2|331401|THO complex 2	NM_001033422|Thoc2|331401|THO complex 2	AK137966|Thoc2|331401|THO complex 2
mm9_v1_chr17_-_35137291_35137321	0.0125794	RUNX1..3.p2	AK161228|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5	AK037701|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5	AK075966|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5
mm9_v1_chr5_-_135422795_135422804	0.0125308	RUNX1..3.p2	AK162721|Cldn4|12740|claudin 4	AK145152|Cldn4|12740|claudin 4	NM_009903|Cldn4|12740|claudin 4
mm9_v1_chr16_-_11254052_11254466	0.0124115	RUNX1..3.p2	BC031640|Gspt1|14852|G1 to S phase transition 1	AK030760|Gspt1|14852|G1 to S phase transition 1	AK032059|Gspt1|14852|G1 to S phase transition 1	AK148603|Gspt1|14852|G1 to S phase transition 1	AK134128|Gspt1|14852|G1 to S phase transition 1	AK037929|Gspt1|14852|G1 to S phase transition 1	AK166626|Gspt1|14852|G1 to S phase transition 1	NM_001130008|Gspt1|14852|G1 to S phase transition 1	NM_146066|Gspt1|14852|G1 to S phase transition 1
mm9_v1_chr17_+_24686778_24686992	0.0123593	RUNX1..3.p2	BC099589|Pkd1|18763|polycystic kidney disease 1 homolog	NM_013630|Pkd1|18763|polycystic kidney disease 1 homolog	U70209|Pkd1|18763|polycystic kidney disease 1 homolog
mm9_v1_chr11_+_85646309_85646316	0.0122775	RUNX1..3.p2	AK149348|Tbx2|21385|T-box 2
mm9_v1_chr18_-_32719516_32719687	0.0122442	RUNX1..3.p2	AK002769|Gypc|71683|glycophorin C	AK082930|Gypc|71683|glycophorin C	AK152607|Gypc|71683|glycophorin C	AK159730|Gypc|71683|glycophorin C	BC027408|Gypc|71683|glycophorin C	AK089652|Gypc|71683|glycophorin C	AY234183|Gypc|71683|glycophorin C	NM_001048207|Gypc|71683|glycophorin C
mm9_v1_chr7_+_140175699_140175731	0.0121965	RUNX1..3.p2	AJ250693|Zranb1|360216|zinc finger, RAN-binding domain containing 1
mm9_v1_chr13_+_67295437_67295470	0.012168	RUNX1..3.p2	NM_001048204|Zfp455|218311|zinc finger protein 455	AK028336|Zfp455|218311|zinc finger protein 455
mm9_v1_chr2_+_58607580_58607600	0.012138	RUNX1..3.p2	AY152393|Upp2|76654|uridine phosphorylase 2	NM_029692|Upp2|76654|uridine phosphorylase 2	AK149444|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr18_-_67020125_67020125	0.0119967	RUNX1..3.p2	AK136793|Mc4r|17202|melanocortin 4 receptor	NM_016977|Mc4r|17202|melanocortin 4 receptor
mm9_v1_chr4_+_33118447_33118538	0.0119538	RUNX1..3.p2	BC024623|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AK003050|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AJ245899|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AK149985|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AK031669|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1
mm9_v1_chr9_-_56008828_56008912	0.0119295	RUNX1..3.p2	AK159621|Tspan3|56434|tetraspanin 3	AK159324|Tspan3|56434|tetraspanin 3	AK169068|Tspan3|56434|tetraspanin 3	BC043072|Tspan3|56434|tetraspanin 3	AK146130|Tspan3|56434|tetraspanin 3	AK168231|Tspan3|56434|tetraspanin 3	NM_019793|Tspan3|56434|tetraspanin 3
mm9_v1_chr7_-_29551532_29551548	0.0118449	RUNX1..3.p2	AY176059|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	AK038631|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	NM_010908|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
mm9_v1_chr1_+_95700522_95700570	0.0118253	RUNX1..3.p2	AK028397|Ing5|66262|inhibitor of growth family, member 5	NM_025454|Ing5|66262|inhibitor of growth family, member 5	AK007536|Ing5|66262|inhibitor of growth family, member 5	BC064674|Ing5|66262|inhibitor of growth family, member 5	AK009312|Ing5|66262|inhibitor of growth family, member 5	AK028010|Ing5|66262|inhibitor of growth family, member 5	AK145695|Ing5|66262|inhibitor of growth family, member 5
mm9_v1_chr12_+_109544479_109544584	0.0117214	RUNX1..3.p2	BC113163|Hhipl1|214305|hedgehog interacting protein-like 1	BC113773|Hhipl1|214305|hedgehog interacting protein-like 1	NM_001044380|Hhipl1|214305|hedgehog interacting protein-like 1	AK166269|Hhipl1|214305|hedgehog interacting protein-like 1
mm9_v1_chr15_+_81742665_81742704	0.0117037	RUNX1..3.p2	AK182718|Aco2|11429|aconitase 2, mitochondrial	AK220091|Aco2|11429|aconitase 2, mitochondrial
mm9_v1_chr11_-_120442889_120442950	0.0116226	RUNX1..3.p2	AK170553|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK143516|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK165241|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK170718|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	NM_133796|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr13_-_74631342_74631441	0.011522	RUNX1..3.p2	BC119319|Zfp825|235956|zinc finger protein 825	BC012278|Zfp825|235956|zinc finger protein 825	NM_146231|Zfp825|235956|zinc finger protein 825
mm9_v1_chr12_+_104187054_104187075	0.011352	RUNX1..3.p2	AB257853|Unc79|217843|unc-79 homolog (C. elegans)
mm9_v1_chr11_-_74710562_74710581	0.0113401	RUNX1..3.p2	BC058414|Sgsm2|97761|small G protein signaling modulator 2	BC060163|Sgsm2|97761|small G protein signaling modulator 2	NM_197943|Sgsm2|97761|small G protein signaling modulator 2
mm9_v1_chr11_+_8948594_8948715	0.0112025	RUNX1..3.p2	NM_001037928|Gm11992|626870|predicted gene 11992	AK154909|Gm11992|626870|predicted gene 11992	AK160996|Gm11992|626870|predicted gene 11992	BC147253|Gm11992|626870|predicted gene 11992	BC147254|Gm11992|626870|predicted gene 11992
mm9_v1_chr1_-_72583137_72583137	0.0110086	RUNX1..3.p2	BC098191|March4|381270|membrane-associated ring finger (C3HC4) 4	NM_001045533|March4|381270|membrane-associated ring finger (C3HC4) 4
mm9_v1_chr12_+_3235481_3235529	0.0109327	RUNX1..3.p2	AK005891|1700012B15Rik|74173|RIKEN cDNA 1700012B15 gene	AK171768|1700012B15Rik|74173|RIKEN cDNA 1700012B15 gene	BC080728|1700012B15Rik|74173|RIKEN cDNA 1700012B15 gene	BC062897|1700012B15Rik|74173|RIKEN cDNA 1700012B15 gene	BC099424|1700012B15Rik|74173|RIKEN cDNA 1700012B15 gene	BC060685|1700012B15Rik|74173|RIKEN cDNA 1700012B15 gene
mm9_v1_chr3_+_95463691_95463776	0.0108866	RUNX1..3.p2	AK010424|Mcl1|17210|myeloid cell leukemia sequence 1	AK160594|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr9_-_22064292_22064338	0.0108611	RUNX1..3.p2	AK032725|Zfp599|235048|zinc finger protein 599	BC050092|Zfp599|235048|zinc finger protein 599	NM_181419|Zfp599|235048|zinc finger protein 599
mm9_v1_chr12_-_70458116_70458130	0.0107626	RUNX1..3.p2	BC037106|Nemf|66244|nuclear export mediator factor	AK039497|Nemf|66244|nuclear export mediator factor
mm9_v1_chr7_+_52112742_52112902	0.0107407	RUNX1..3.p2	AK159535|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK159770|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK160020|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AF129451|Pnkp|59047|polynucleotide kinase 3'- phosphatase
mm9_v1_chr5_+_28643698_28643741	0.010717	RUNX1..3.p2	NM_028234|Rbm33|381626|RNA binding motif protein 33	AK014289|Rbm33|381626|RNA binding motif protein 33
mm9_v1_chr2_-_118375365_118375421	0.0105043	RUNX1..3.p2	AK040622|Bmf|171543|BCL2 modifying factor	AK169903|Bmf|171543|BCL2 modifying factor	NM_138313|Bmf|171543|BCL2 modifying factor	AK084658|Bmf|171543|BCL2 modifying factor
mm9_v1_chr4_-_94269767_94269798	0.0104266	RUNX1..3.p2	M57958|Plaa|18786|phospholipase A2, activating protein
mm9_v1_chr16_+_7409879_7410026	0.0103938	RUNX1..3.p2	AK034297|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr12_+_8214912_8214977	0.010301	RUNX1..3.p2	NM_172401|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK079099|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	NM_001167768|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	NM_001167767|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK076460|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK086717|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK162914|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	BC057311|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK036177|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene	AK162850|1110057K04Rik|68832|RIKEN cDNA 1110057K04 gene
mm9_v1_chr3_-_87689483_87689550	0.0102735	RUNX1..3.p2	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr1_+_75396650_75396733	0.0102196	RUNX1..3.p2	NM_001173477|Speg|11790|SPEG complex locus
mm9_v1_chr19_-_44144175_44144240	0.0100998	RUNX1..3.p2	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr11_+_86497546_86497594	0.010002	RUNX1..3.p2	AK086996|Ptrh2|217057|peptidyl-tRNA hydrolase 2	AK031620|Ptrh2|217057|peptidyl-tRNA hydrolase 2	NM_001098810|Ptrh2|217057|peptidyl-tRNA hydrolase 2
mm9_v1_chrX_-_41721513_41721518	0.00995715	RUNX1..3.p2	AK037333|Dcaf12l2|245403|DDB1 and CUL4 associated factor 12-like 2	NM_175539|Dcaf12l2|245403|DDB1 and CUL4 associated factor 12-like 2	AK076436|Dcaf12l2|245403|DDB1 and CUL4 associated factor 12-like 2
mm9_v1_chr9_+_108957402_108957503	0.00993584	RUNX1..3.p2	AK081060|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK020877|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK018291|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	NM_026381|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC057089|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC017600|Shisa5|66940|shisa homolog 5 (Xenopus laevis)
mm9_v1_chr16_-_44111760_44111776	0.00989875	RUNX1..3.p2	AK216026|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A
mm9_v1_chr7_+_30954893_30954940	0.0098805	RUNX1..3.p2	AK046598|Gm5113|330503|predicted gene 5113	AK147880|Gm5113|330503|predicted gene 5113	NM_001033540|Gm5113|330503|predicted gene 5113
mm9_v1_chr11_-_70051361_70051426	0.00982325	RUNX1..3.p2	AK169173|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK170380|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK003842|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177601|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177603|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177606|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177607|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_026757|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_145758|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr16_-_65105465_65105679	0.00977991	RUNX1..3.p2	BC120507|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	BC137604|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	NM_008310|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	Z14224|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	AK045364|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F
mm9_v1_chr7_-_52252911_52252974	0.00968786	RUNX1..3.p2	AK013411|Bcl2l12|75736|BCL2-like 12 (proline rich)	AK017362|Bcl2l12|75736|BCL2-like 12 (proline rich)	NM_029410|Bcl2l12|75736|BCL2-like 12 (proline rich)
mm9_v1_chr4_+_102432773_102432784	0.00963904	RUNX1..3.p2	AK147926|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1
mm9_v1_chr2_+_10075169_10075197	0.00961771	RUNX1..3.p2	AK140756|Itih5|209378|inter-alpha (globulin) inhibitor H5	NM_172471|Itih5|209378|inter-alpha (globulin) inhibitor H5	BC062196|Itih5|209378|inter-alpha (globulin) inhibitor H5
mm9_v1_chr3_+_51297898_51297938	0.00953155	RUNX1..3.p2	
mm9_v1_chr4_+_130219299_130219334	0.00950766	RUNX1..3.p2	BC050747|Pum1|80912|pumilio 1 (Drosophila)	AK147185|Pum1|80912|pumilio 1 (Drosophila)	AF321909|Pum1|80912|pumilio 1 (Drosophila)	BC048174|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr7_+_112885261_112885270	0.00949486	RUNX1..3.p2	U94479|Ilk|16202|integrin linked kinase
mm9_v1_chr8_-_87356112_87356159	0.00943916	RUNX1..3.p2	AK143395|Dand5|23863|DAN domain family, member 5
mm9_v1_chr10_-_7400836_7400969	0.00941986	RUNX1..3.p2	AK030763|BC020402|407824|cDNA sequence BC020402	BC020402|BC020402|407824|cDNA sequence BC020402	AK132475|BC020402|407824|cDNA sequence BC020402
mm9_v1_chr11_+_74644411_74644428	0.00934928	RUNX1..3.p2	NM_010813|Mnt|17428|max binding protein	U77356|Mnt|17428|max binding protein
mm9_v1_chr7_+_77509969_77510044	0.00933882	RUNX1..3.p2	BC070425|B130024G19Rik|434198|RIKEN cDNA B130024G19 gene
mm9_v1_chr12_+_107248419_107248492	0.00926872	RUNX1..3.p2	BC016676|Vrk1|22367|vaccinia related kinase 1	NM_001029843|Vrk1|22367|vaccinia related kinase 1	NM_001029844|Vrk1|22367|vaccinia related kinase 1	NM_011705|Vrk1|22367|vaccinia related kinase 1	BC051072|Vrk1|22367|vaccinia related kinase 1
mm9_v1_chr3_+_115710653_115710683	0.00919074	RUNX1..3.p2	BC094444|Extl2|58193|exostoses (multiple)-like 2
mm9_v1_chr5_+_138613248_138613363	0.00918179	RUNX1..3.p2	AK031638|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	NM_021392|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	AK165187|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1	BC011174|Ap4m1|11781|adaptor-related protein complex AP-4, mu 1
mm9_v1_chr13_+_55724355_55724380	0.00916491	RUNX1..3.p2	AK002895|Caml|12328|calcium modulating ligand	NM_007596|Caml|12328|calcium modulating ligand
mm9_v1_chr8_+_108734906_108734964	0.00914037	RUNX1..3.p2	AK040103|Prmt7|214572|protein arginine N-methyltransferase 7	AK154255|Prmt7|214572|protein arginine N-methyltransferase 7	BC057177|Prmt7|214572|protein arginine N-methyltransferase 7	AK173304|Prmt7|214572|protein arginine N-methyltransferase 7	BC006705|Prmt7|214572|protein arginine N-methyltransferase 7	NM_145404|Prmt7|214572|protein arginine N-methyltransferase 7
mm9_v1_chr9_+_45646611_45646685	0.00908516	RUNX1..3.p2	NM_001145947|Bace1|23821|beta-site APP cleaving enzyme 1	NM_011792|Bace1|23821|beta-site APP cleaving enzyme 1	AK033112|Bace1|23821|beta-site APP cleaving enzyme 1	AK041285|Bace1|23821|beta-site APP cleaving enzyme 1	AK080498|Bace1|23821|beta-site APP cleaving enzyme 1	AK082317|Bace1|23821|beta-site APP cleaving enzyme 1	AK163583|Bace1|23821|beta-site APP cleaving enzyme 1	AK046175|Bace1|23821|beta-site APP cleaving enzyme 1	AK082230|Bace1|23821|beta-site APP cleaving enzyme 1	AK049626|Bace1|23821|beta-site APP cleaving enzyme 1	AF190726|Bace1|23821|beta-site APP cleaving enzyme 1	AK014464|Bace1|23821|beta-site APP cleaving enzyme 1	BC048189|Bace1|23821|beta-site APP cleaving enzyme 1
mm9_v1_chr2_-_181022670_181022690	0.00906823	RUNX1..3.p2	BC059066|Gmeb2|229004|glucocorticoid modulatory element binding protein 2	NM_198169|Gmeb2|229004|glucocorticoid modulatory element binding protein 2
mm9_v1_chr3_+_142428186_142428231	0.00906113	RUNX1..3.p2	AK146223|Gtf2b|229906|general transcription factor IIB	AK131856|Gtf2b|229906|general transcription factor IIB	AK133097|Gtf2b|229906|general transcription factor IIB	AK133825|Gtf2b|229906|general transcription factor IIB	AK143935|Gtf2b|229906|general transcription factor IIB	AK145403|Gtf2b|229906|general transcription factor IIB	AK146666|Gtf2b|229906|general transcription factor IIB	AK146910|Gtf2b|229906|general transcription factor IIB	AK151577|Gtf2b|229906|general transcription factor IIB	BC016637|Gtf2b|229906|general transcription factor IIB	NM_145546|Gtf2b|229906|general transcription factor IIB
mm9_v1_chr4_+_114672849_114672868	0.00905116	RUNX1..3.p2	BC141175|Stil|20460|Scl/Tal1 interrupting locus	BC145493|Stil|20460|Scl/Tal1 interrupting locus
mm9_v1_chr16_-_89818596_89818596	0.00902101	RUNX1..3.p2	AK136856|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_001145887|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chrX_-_148776674_148776969	0.00892221	RUNX1..3.p2	BC004006|Tspyl2|52808|TSPY-like 2	BC043694|Tspyl2|52808|TSPY-like 2	AY273809|Tspyl2|52808|TSPY-like 2	BC054393|Tspyl2|52808|TSPY-like 2	AK018700|Tspyl2|52808|TSPY-like 2
mm9_v1_chr8_+_86520110_86520238	0.00879947	RUNX1..3.p2	AK131888|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha
mm9_v1_chr11_-_120442851_120442887	0.00874898	RUNX1..3.p2	BC086755|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	BC004732|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK156819|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha	AK172140|Arhgdia|192662|Rho GDP dissociation inhibitor (GDI) alpha
mm9_v1_chr7_+_106529922_106529967	0.00856486	RUNX1..3.p2	AK154771|Gdpd5|233552|glycerophosphodiester phosphodiesterase domain containing 5
mm9_v1_chr2_-_28321788_28321851	0.00849767	RUNX1..3.p2	AY927869|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene	BC048581|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene	BC099566|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene	NM_027040|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene	AK005731|1700007K13Rik|69327|RIKEN cDNA 1700007K13 gene
mm9_v1_chr9_+_14305110_14305173	0.00849095	RUNX1..3.p2	AK003834|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK002864|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK145249|Cwc15|66070|CWC15 homolog (S. cerevisiae)	BC004726|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK013670|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK167776|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK168365|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AK003202|Cwc15|66070|CWC15 homolog (S. cerevisiae)	AJ250394|Cwc15|66070|CWC15 homolog (S. cerevisiae)
mm9_v1_chr2_+_172825609_172825642	0.00825645	RUNX1..3.p2	BC060072|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK079383|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	NM_175112|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr5_-_4104331_4104507	0.00822139	RUNX1..3.p2	AK028355|Cyp51|13121|cytochrome P450, family 51	BC031813|Cyp51|13121|cytochrome P450, family 51	AK031059|Cyp51|13121|cytochrome P450, family 51	AK075764|Cyp51|13121|cytochrome P450, family 51	AK076983|Cyp51|13121|cytochrome P450, family 51	AF166266|Cyp51|13121|cytochrome P450, family 51	AK028815|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr16_+_96422243_96422259	0.00818744	RUNX1..3.p2	AJ272170|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein	BC055870|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein
mm9_v1_chr10_-_13272820_13272870	0.00792278	RUNX1..3.p2	BC033415|Pex3|56535|peroxisomal biogenesis factor 3	AK075820|Pex3|56535|peroxisomal biogenesis factor 3	AF152996|Pex3|56535|peroxisomal biogenesis factor 3
mm9_v1_chr1_-_75206018_75206068	0.00790696	RUNX1..3.p2	BC021773|Glb1l|74577|galactosidase, beta 1-like	AK014667|Glb1l|74577|galactosidase, beta 1-like
mm9_v1_chr6_+_119429620_119429803	0.0078558	RUNX1..3.p2	NM_133940|Fbxl14|101358|F-box and leucine-rich repeat protein 14	AK036124|Fbxl14|101358|F-box and leucine-rich repeat protein 14	AK084506|Fbxl14|101358|F-box and leucine-rich repeat protein 14	AK155154|Fbxl14|101358|F-box and leucine-rich repeat protein 14	BC021329|Fbxl14|101358|F-box and leucine-rich repeat protein 14
mm9_v1_chr4_-_99495806_99495876	0.00780926	RUNX1..3.p2	AK045037|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK166362|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	NM_026348|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK179730|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	BC049557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK013373|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK015557|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK153726|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK088352|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK165072|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)	AK005779|Itgb3bp|67733|integrin beta 3 binding protein (beta3-endonexin)
mm9_v1_chr6_-_122289630_122289670	0.0078091	RUNX1..3.p2	S73882|Phc1|13619|polyhomeotic-like 1 (Drosophila)	S73883|Phc1|13619|polyhomeotic-like 1 (Drosophila)	S73884|Phc1|13619|polyhomeotic-like 1 (Drosophila)	BC046535|Phc1|13619|polyhomeotic-like 1 (Drosophila)	AK167590|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chr17_-_35342157_35342435	0.00776824	RUNX1..3.p2	AK080308|Lta|16992|lymphotoxin A	AK153694|Lta|16992|lymphotoxin A	BC099464|Lta|16992|lymphotoxin A	NM_010735|Lta|16992|lymphotoxin A	AK156659|Lta|16992|lymphotoxin A
mm9_v1_chr19_+_10651924_10651980	0.0077623	RUNX1..3.p2	AK169729|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK172638|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK040692|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK160179|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK168841|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK170911|Cybasc3|225912|cytochrome b, ascorbate dependent 3
mm9_v1_chr11_-_77421308_77421363	0.00775633	RUNX1..3.p2	AK143530|Taok1|216965|TAO kinase 1	NM_144825|Taok1|216965|TAO kinase 1
mm9_v1_chr19_-_10651550_10651606	0.00759816	RUNX1..3.p2	AK007197|Tmem138|72982|transmembrane protein 138	AK013694|Tmem138|72982|transmembrane protein 138	NM_028411|Tmem138|72982|transmembrane protein 138	AK050471|Tmem138|72982|transmembrane protein 138	AK031921|Tmem138|72982|transmembrane protein 138
mm9_v1_chr12_-_56403949_56403990	0.00755556	RUNX1..3.p2	BC024754|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028063|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AB041577|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK033405|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK163192|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK168298|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	NM_021529|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chr10_-_23506981_23507073	0.0075496	RUNX1..3.p2	BC090257|Rps12|20042|ribosomal protein S12	BC089339|Rps12|20042|ribosomal protein S12	BC092044|Rps12|20042|ribosomal protein S12	BC002079|Rps12|20042|ribosomal protein S12	BC099377|Rps12|20042|ribosomal protein S12	BC089338|Rps12|20042|ribosomal protein S12	AK132208|Rps12|20042|ribosomal protein S12	AK166923|Rps12|20042|ribosomal protein S12	AK166992|Rps12|20042|ribosomal protein S12	BC096653|Rps12|20042|ribosomal protein S12	AK002848|Rps12|20042|ribosomal protein S12	AK008057|Rps12|20042|ribosomal protein S12	AK032757|Rps12|20042|ribosomal protein S12	AK168324|Rps12|20042|ribosomal protein S12	AK169215|Rps12|20042|ribosomal protein S12	NM_011295|Rps12|20042|ribosomal protein S12
mm9_v1_chr7_-_77511607_77511666	0.0075458	RUNX1..3.p2	BC094360|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_183261|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chrX_+_10294740_10294786	0.00750311	RUNX1..3.p2	AK188647|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm9_v1_chr17_+_71202075_71202104	0.00746643	RUNX1..3.p2	AK082636|C230073G13Rik|320430|RIKEN cDNA C230073G13 gene
mm9_v1_chr12_+_37835132_37835270	0.007288	RUNX1..3.p2	AK028352|Meox2|17286|mesenchyme homeobox 2	NM_008584|Meox2|17286|mesenchyme homeobox 2	AK031152|Meox2|17286|mesenchyme homeobox 2	BC002076|Meox2|17286|mesenchyme homeobox 2	AK142690|Meox2|17286|mesenchyme homeobox 2	Z16406|Meox2|17286|mesenchyme homeobox 2
mm9_v1_chr7_-_106632113_106632218	0.00728286	RUNX1..3.p2	AK206775|Rps3|27050|ribosomal protein S3	X76772|Rps3|27050|ribosomal protein S3	BC010721|Rps3|27050|ribosomal protein S3	AK165174|Rps3|27050|ribosomal protein S3	AK167266|Rps3|27050|ribosomal protein S3	AK168845|Rps3|27050|ribosomal protein S3	AK150479|Rps3|27050|ribosomal protein S3	AK003181|Rps3|27050|ribosomal protein S3	AK011655|Rps3|27050|ribosomal protein S3	AK146796|Rps3|27050|ribosomal protein S3	AK012234|Rps3|27050|ribosomal protein S3	AK012314|Rps3|27050|ribosomal protein S3	AK012538|Rps3|27050|ribosomal protein S3	AK088038|Rps3|27050|ribosomal protein S3	AK143603|Rps3|27050|ribosomal protein S3	AK148030|Rps3|27050|ribosomal protein S3	AK160526|Rps3|27050|ribosomal protein S3	AK167210|Rps3|27050|ribosomal protein S3	AK010579|Rps3|27050|ribosomal protein S3	AK010678|Rps3|27050|ribosomal protein S3	AK051243|Rps3|27050|ribosomal protein S3	AK146165|Rps3|27050|ribosomal protein S3	AK159508|Rps3|27050|ribosomal protein S3	AK164077|Rps3|27050|ribosomal protein S3	AK166750|Rps3|27050|ribosomal protein S3	NM_012052|Rps3|27050|ribosomal protein S3
mm9_v1_chr11_+_59263522_59263622	0.00721842	RUNX1..3.p2	AK047586|Jmjd4|194952|jumonji domain containing 4	AK037954|Jmjd4|194952|jumonji domain containing 4	BC049148|Jmjd4|194952|jumonji domain containing 4	AK052144|Jmjd4|194952|jumonji domain containing 4	AK032477|Jmjd4|194952|jumonji domain containing 4	AK145394|Jmjd4|194952|jumonji domain containing 4	AK079104|Jmjd4|194952|jumonji domain containing 4	AK084669|Jmjd4|194952|jumonji domain containing 4	NM_178659|Jmjd4|194952|jumonji domain containing 4	AK171919|Jmjd4|194952|jumonji domain containing 4	BC116707|Jmjd4|194952|jumonji domain containing 4	BC118020|Jmjd4|194952|jumonji domain containing 4	BC098198|Jmjd4|194952|jumonji domain containing 4
mm9_v1_chr17_-_24388262_24388385	0.00710279	RUNX1..3.p2	BC021658|Ccnf|12449|cyclin F	Z47766|Ccnf|12449|cyclin F	U20612|Ccnf|12449|cyclin F	U20636|Ccnf|12449|cyclin F	AK085183|Ccnf|12449|cyclin F	AK030298|Ccnf|12449|cyclin F	AK031613|Ccnf|12449|cyclin F	AK032961|Ccnf|12449|cyclin F	AK162447|Ccnf|12449|cyclin F	AK169263|Ccnf|12449|cyclin F	AK082485|Ccnf|12449|cyclin F	AK159594|Ccnf|12449|cyclin F	NM_007634|Ccnf|12449|cyclin F
mm9_v1_chr1_+_61685397_61685574	0.00708303	RUNX1..3.p2	AK013352|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	NM_001081050|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK051398|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK031487|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK141451|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK008055|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)
mm9_v1_chr9_-_44128228_44128398	0.0069992	RUNX1..3.p2	BC060156|C2cd2l|71764|C2 calcium-dependent domain containing 2-like	AK039220|C2cd2l|71764|C2 calcium-dependent domain containing 2-like	AK153804|C2cd2l|71764|C2 calcium-dependent domain containing 2-like	NM_027909|C2cd2l|71764|C2 calcium-dependent domain containing 2-like	AK004920|C2cd2l|71764|C2 calcium-dependent domain containing 2-like
mm9_v1_chr15_-_31383379_31383491	0.00691939	RUNX1..3.p2	BC048680|Ropn1l|252967|ropporin 1-like	AF305427|Ropn1l|252967|ropporin 1-like	BC060990|Ropn1l|252967|ropporin 1-like	NM_145852|Ropn1l|252967|ropporin 1-like	AK131675|Ropn1l|252967|ropporin 1-like
mm9_v1_chr16_-_18248701_18248813	0.00690788	RUNX1..3.p2	AK008276|Ranbp1|19385|RAN binding protein 1	AK002989|Ranbp1|19385|RAN binding protein 1	AK151167|Ranbp1|19385|RAN binding protein 1	AK153074|Ranbp1|19385|RAN binding protein 1	AK167053|Ranbp1|19385|RAN binding protein 1	AK088781|Ranbp1|19385|RAN binding protein 1	AK166642|Ranbp1|19385|RAN binding protein 1	NM_011239|Ranbp1|19385|RAN binding protein 1	X56045|Ranbp1|19385|RAN binding protein 1	X56046|Ranbp1|19385|RAN binding protein 1	BC061140|Ranbp1|19385|RAN binding protein 1
mm9_v1_chr5_-_21290925_21290949	0.00683617	RUNX1..3.p2	U53208|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK161347|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2
mm9_v1_chr1_-_34496516_34496516	0.00673706	RUNX1..3.p2	BC019430|Ccdc115|69668|coiled-coil domain containing 115	NM_027159|Ccdc115|69668|coiled-coil domain containing 115
mm9_v1_chr7_-_36181628_36181850	0.00671203	RUNX1..3.p2	BC096687|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK153918|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK082457|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	NM_178643|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK040248|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK031566|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK166481|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene
mm9_v1_chr6_-_35276109_35276143	0.00667689	RUNX1..3.p2	BC064033|Fam180a|208164|family with sequence similarity 180, member A	AK045849|Fam180a|208164|family with sequence similarity 180, member A	AK157966|Fam180a|208164|family with sequence similarity 180, member A	NM_173375|Fam180a|208164|family with sequence similarity 180, member A
mm9_v1_chr18_+_61886043_61886108	0.00666263	RUNX1..3.p2	AK005240|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	AK133612|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	BC038318|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	BC047208|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene
mm9_v1_chr17_+_37095536_37095635	0.00665178	RUNX1..3.p2	BC027007|Znrd1as|76416|ZNRD1 antisense RNA	NM_029602|Znrd1as|76416|ZNRD1 antisense RNA	AK006236|Znrd1as|76416|ZNRD1 antisense RNA	AK161503|Znrd1as|76416|ZNRD1 antisense RNA
mm9_v1_chr2_-_180869796_180869941	0.00657454	RUNX1..3.p2	AF490773|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000494|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000495|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000496|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000497|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000498|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000499|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000500|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000501|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000502|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000503|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	AB000504|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	BC145453|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001003824|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001003825|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006668|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006669|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006674|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006675|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006676|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006677|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006678|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006679|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_001006680|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2	NM_010611|Kcnq2|16536|potassium voltage-gated channel, subfamily Q, member 2
mm9_v1_chr9_+_108564418_108564538	0.00657347	RUNX1..3.p2	AK161086|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	AK075624|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	NM_020520|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	BC029733|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	AK152436|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	BC052871|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
mm9_v1_chr17_-_47639222_47639245	0.00655528	RUNX1..3.p2	BC057895|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	BC023756|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AF222802|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK045108|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK049949|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK076486|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK086656|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK161658|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK162110|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	NM_022015|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq
mm9_v1_chr4_+_143002828_143002889	0.00651037	RUNX1..3.p2	AK054398|Pramef8|242736|PRAME family member 8	BC056931|Pramef8|242736|PRAME family member 8
mm9_v1_chr11_+_93747419_93747532	0.00643935	RUNX1..3.p2	AK153919|Mbtd1|103537|mbt domain containing 1	BC064014|Mbtd1|103537|mbt domain containing 1	BC062907|Mbtd1|103537|mbt domain containing 1	NM_134012|Mbtd1|103537|mbt domain containing 1
mm9_v1_chr6_-_93628981_93629110	0.00643392	RUNX1..3.p2	AF027505|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK081387|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr13_+_97158248_97158334	0.00636627	RUNX1..3.p2	AK150656|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	NM_026173|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK012926|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC037631|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC027118|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK089013|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK004769|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC016527|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr13_+_94827750_94827786	0.00631932	RUNX1..3.p2	AK087506|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2	NM_172589|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2	AK031635|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2	AK054342|Lhfpl2|218454|lipoma HMGIC fusion partner-like 2
mm9_v1_chr8_-_108535317_108535385	0.00623544	RUNX1..3.p2	AK010396|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	AK163480|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC058568|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120556|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	BC120582|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	NM_028038|Ddx28|71986|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
mm9_v1_chr11_-_69793719_69793789	0.00623218	RUNX1..3.p2	AK011130|Rai12|54351|retinoic acid induced 12
mm9_v1_chrX_+_102318792_102318798	0.00623185	RUNX1..3.p2	AK209904|Magee1|107528|melanoma antigen, family E, 1
mm9_v1_chr1_+_57434514_57434552	0.00619166	RUNX1..3.p2	AK006906|1700066M21Rik|73467|RIKEN cDNA 1700066M21 gene
mm9_v1_chr19_+_4839365_4839460	0.00607699	RUNX1..3.p2	NM_207268|Ccdc87|399599|coiled-coil domain containing 87	AK029877|Ccdc87|399599|coiled-coil domain containing 87	BC145660|Ccdc87|399599|coiled-coil domain containing 87
mm9_v1_chr1_+_172949069_172949110	0.00601637	RUNX1..3.p2	BC027310|Fcgr4|246256|Fc receptor, IgG, low affinity IV	AK170920|Fcgr4|246256|Fc receptor, IgG, low affinity IV	AF499613|Fcgr4|246256|Fc receptor, IgG, low affinity IV	EU050648|Fcgr4|246256|Fc receptor, IgG, low affinity IV
mm9_v1_chr10_+_7499982_7500066	0.00594236	RUNX1..3.p2	
mm9_v1_chr7_+_13483153_13483228	0.00592503	RUNX1..3.p2	AK052559|Zscan22|232878|zinc finger and SCAN domain containing 22	AK085207|Zscan22|232878|zinc finger and SCAN domain containing 22	NM_001001447|Zscan22|232878|zinc finger and SCAN domain containing 22	AK163694|Zscan22|232878|zinc finger and SCAN domain containing 22	AK078591|Zscan22|232878|zinc finger and SCAN domain containing 22	BC026676|Zscan22|232878|zinc finger and SCAN domain containing 22
mm9_v1_chr1_-_157820302_157820320	0.00579937	RUNX1..3.p2	BC019716|Cep350|74081|centrosomal protein 350
mm9_v1_chr16_+_10545494_10545538	0.00575683	RUNX1..3.p2	AK089327|Clec16a|74374|C-type lectin domain family 16, member A	AK156927|Clec16a|74374|C-type lectin domain family 16, member A	AK170754|Clec16a|74374|C-type lectin domain family 16, member A	AK171134|Clec16a|74374|C-type lectin domain family 16, member A	BC138907|Clec16a|74374|C-type lectin domain family 16, member A	BC138909|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr8_+_73895221_73895251	0.00570295	RUNX1..3.p2	AK155219|Ocel1|77090|occludin/ELL domain containing 1	AK143433|Ocel1|77090|occludin/ELL domain containing 1	BC019407|Ocel1|77090|occludin/ELL domain containing 1
mm9_v1_chr6_+_119852710_119852793	0.00563106	RUNX1..3.p2	NM_001166381|Rad52|19365|RAD52 homolog (S. cerevisiae)	NM_001166382|Rad52|19365|RAD52 homolog (S. cerevisiae)	NM_001166383|Rad52|19365|RAD52 homolog (S. cerevisiae)	NM_011236|Rad52|19365|RAD52 homolog (S. cerevisiae)	Z32767|Rad52|19365|RAD52 homolog (S. cerevisiae)	AK080702|Rad52|19365|RAD52 homolog (S. cerevisiae)	BC019123|Rad52|19365|RAD52 homolog (S. cerevisiae)	U12135|Rad52|19365|RAD52 homolog (S. cerevisiae)	BC010673|Rad52|19365|RAD52 homolog (S. cerevisiae)	U06837|Rad52|19365|RAD52 homolog (S. cerevisiae)
mm9_v1_chr2_-_35056582_35056639	0.00559836	RUNX1..3.p2	AK160859|Rab14|68365|RAB14, member RAS oncogene family	NM_026697|Rab14|68365|RAB14, member RAS oncogene family
mm9_v1_chr2_+_84776817_84776846	0.00557865	RUNX1..3.p2	AF188622|Slc43a3|58207|solute carrier family 43, member 3
mm9_v1_chr15_+_76709688_76709760	0.00556257	RUNX1..3.p2	BC011501|Zfp7|223669|zinc finger protein 7	NM_145916|Zfp7|223669|zinc finger protein 7	AK144887|Zfp7|223669|zinc finger protein 7	AK038299|Zfp7|223669|zinc finger protein 7	AK143414|Zfp7|223669|zinc finger protein 7	AK168948|Zfp7|223669|zinc finger protein 7	BC062103|Zfp7|223669|zinc finger protein 7
mm9_v1_chr1_+_130140700_130141098	0.00548581	RUNX1..3.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr18_+_36720238_36720319	0.00542412	RUNX1..3.p2	NM_175375|Ankhd1|108857|ankyrin repeat and KH domain containing 1	AK080941|Ankhd1|108857|ankyrin repeat and KH domain containing 1
mm9_v1_chr7_+_31742368_31742427	0.00540102	RUNX1..3.p2	AK154275|Lsr|54135|lipolysis stimulated lipoprotein receptor
mm9_v1_chr10_+_126478969_126479041	0.00538045	RUNX1..3.p2	AB023619|Mettl1|17299|methyltransferase like 1	NM_010792|Mettl1|17299|methyltransferase like 1	BC012649|Mettl1|17299|methyltransferase like 1	AK160562|Mettl1|17299|methyltransferase like 1	AK160914|Mettl1|17299|methyltransferase like 1	AK164284|Mettl1|17299|methyltransferase like 1	AK140605|Mettl1|17299|methyltransferase like 1	Y18644|Mettl1|17299|methyltransferase like 1
mm9_v1_chr9_+_108382255_108382288	0.00536956	RUNX1..3.p2	BC026051|Lamb2|16779|laminin, beta 2
mm9_v1_chr10_-_128002934_128002985	0.00523446	RUNX1..3.p2	BC046532|Pa2g4|18813|proliferation-associated 2G4	BC086788|Pa2g4|18813|proliferation-associated 2G4	BC028926|Pa2g4|18813|proliferation-associated 2G4	BC003777|Pa2g4|18813|proliferation-associated 2G4	BC005593|Pa2g4|18813|proliferation-associated 2G4
mm9_v1_chr9_+_66006025_66006053	0.00519488	RUNX1..3.p2	NM_010019|Dapk2|13143|death-associated protein kinase 2	AK158082|Dapk2|13143|death-associated protein kinase 2	AB018002|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr13_+_40955500_40955723	0.00517308	RUNX1..3.p2	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr5_+_137994744_137994862	0.00509046	RUNX1..3.p2	BC049539|Actl6b|83766|actin-like 6B	NM_031404|Actl6b|83766|actin-like 6B	AB075226|Actl6b|83766|actin-like 6B
mm9_v1_chr2_+_181415029_181415076	0.00491156	RUNX1..3.p2	AB010271|Tcea2|21400|transcription elongation factor A (SII), 2
mm9_v1_chr6_-_24614965_24614972	0.00486455	RUNX1..3.p2	AK144789|Wasl|73178|Wiskott-Aldrich syndrome-like (human)	BC055045|Wasl|73178|Wiskott-Aldrich syndrome-like (human)
mm9_v1_chr11_+_120353171_120353266	0.00476248	RUNX1..3.p2	AK083831|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	AK008038|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	AF188712|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	AK050282|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	BC003222|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10
mm9_v1_chr10_+_55826722_55826737	0.00440666	RUNX1..3.p2	BC037487|Msl3l2|73390|male-specific lethal 3-like 2 (Drosophila)	NM_001163833|Msl3l2|73390|male-specific lethal 3-like 2 (Drosophila)	AK155382|Msl3l2|73390|male-specific lethal 3-like 2 (Drosophila)
mm9_v1_chr8_+_26830853_26830927	0.00437207	RUNX1..3.p2	AK007542|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC039626|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B
mm9_v1_chr13_+_89680393_89680435	0.00436689	RUNX1..3.p2	BC066853|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr3_+_66789621_66789657	0.0042961	RUNX1..3.p2	AK168539|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC038303|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK004742|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK169340|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC027501|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC083123|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr9_-_43047862_43047949	0.00420077	RUNX1..3.p2	BC026022|Oaf|102644|OAF homolog (Drosophila)	BC034836|Oaf|102644|OAF homolog (Drosophila)	AK150279|Oaf|102644|OAF homolog (Drosophila)	BC025514|Oaf|102644|OAF homolog (Drosophila)	AK051349|Oaf|102644|OAF homolog (Drosophila)	NM_178644|Oaf|102644|OAF homolog (Drosophila)
mm9_v1_chr12_-_70994089_70994191	0.00410968	RUNX1..3.p2	BC048173|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK045031|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK053775|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	NM_201519|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr19_-_7054901_7054955	0.00410626	RUNX1..3.p2	BC031824|Fkbp2|14227|FK506 binding protein 2	BC053692|Fkbp2|14227|FK506 binding protein 2	AK144284|Fkbp2|14227|FK506 binding protein 2	AK165394|Fkbp2|14227|FK506 binding protein 2	NM_008020|Fkbp2|14227|FK506 binding protein 2	NM_001166368|Fkbp2|14227|FK506 binding protein 2
mm9_v1_chr11_-_97643677_97643690	0.00405905	RUNX1..3.p2	AK168133|Rpl23|65019|ribosomal protein L23	AF287271|Rpl23|65019|ribosomal protein L23	BC025918|Rpl23|65019|ribosomal protein L23	BC081448|Rpl23|65019|ribosomal protein L23
mm9_v1_chr15_+_3230406_3230616	0.004021	RUNX1..3.p2	
mm9_v1_chr18_+_73975205_73975281	0.00400283	RUNX1..3.p2	
mm9_v1_chr16_-_8637591_8637803	0.00399982	RUNX1..3.p2	AK013147|Tmem186|66690|transmembrane protein 186	BC027261|Tmem186|66690|transmembrane protein 186	AK009236|Tmem186|66690|transmembrane protein 186	AK013277|Tmem186|66690|transmembrane protein 186	AK033686|Tmem186|66690|transmembrane protein 186	BC058268|Tmem186|66690|transmembrane protein 186	AK159727|Tmem186|66690|transmembrane protein 186	AK159782|Tmem186|66690|transmembrane protein 186	AK014478|Tmem186|66690|transmembrane protein 186	NM_025708|Tmem186|66690|transmembrane protein 186	AK088656|Tmem186|66690|transmembrane protein 186
mm9_v1_chr15_-_83386114_83386196	0.00393216	RUNX1..3.p2	BC099494|Mcat|223722|malonyl CoA:ACP acyltransferase (mitochondrial)	NM_001030014|Mcat|223722|malonyl CoA:ACP acyltransferase (mitochondrial)	AK135457|Mcat|223722|malonyl CoA:ACP acyltransferase (mitochondrial)
mm9_v1_chr9_-_106340564_106340582	0.00386364	RUNX1..3.p2	AK003703|Acy1|109652|aminoacylase 1	NM_025371|Acy1|109652|aminoacylase 1
mm9_v1_chr13_+_21925611_21925647	0.00381022	RUNX1..3.p2	AK036389|Hist1h2br|665622|histone cluster 1 H2br	NM_001097979|Hist1h2bq|665596|histone cluster 1, H2bq	NM_001110555|Hist1h2br|665622|histone cluster 1 H2br	BC011440|Hist1h2br|665622|histone cluster 1 H2br	BC115792|Hist1h2bj|319183|histone cluster 1, H2bj
mm9_v1_chr11_+_70246079_70246238	0.00379773	RUNX1..3.p2	AK150389|Arrb2|216869|arrestin, beta 2	AK170647|Arrb2|216869|arrestin, beta 2	AK089542|Arrb2|216869|arrestin, beta 2	AK162889|Arrb2|216869|arrestin, beta 2	AK159317|Arrb2|216869|arrestin, beta 2	NM_145429|Arrb2|216869|arrestin, beta 2	AK154874|Arrb2|216869|arrestin, beta 2	AK170889|Arrb2|216869|arrestin, beta 2	BC016642|Arrb2|216869|arrestin, beta 2
mm9_v1_chr10_+_93103715_93103796	0.00372691	RUNX1..3.p2	NM_021320|Ntn4|57764|netrin 4
mm9_v1_chr5_-_143874629_143874716	0.00359271	RUNX1..3.p2	AK089775|Rnf216|108086|ring finger protein 216	AK090306|Rnf216|108086|ring finger protein 216	AK147861|Rnf216|108086|ring finger protein 216	AK149741|Rnf216|108086|ring finger protein 216	AK154368|Rnf216|108086|ring finger protein 216	BC065066|Rnf216|108086|ring finger protein 216	NM_080561|Rnf216|108086|ring finger protein 216	NM_207110|Rnf216|108086|ring finger protein 216
mm9_v1_chr1_+_75435521_75435559	0.00357397	RUNX1..3.p2	AK189243|Gmppa|69080|GDP-mannose pyrophosphorylase A
mm9_v1_chr16_-_85901362_85901374	0.00351499	RUNX1..3.p2	NM_011782|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr3_+_96049419_96049503	0.00341128	RUNX1..3.p2	BC089519|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147778|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147781|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK002725|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK006728|Hist2h2aa1|15267|histone cluster 2, H2aa1	NM_013549|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC010564|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC053966|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC062255|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC080809|Hist2h3c1|15077|histone cluster 2, H3c1	Z30940|Hist2h2aa1|15267|histone cluster 2, H2aa1	NM_178212|Hist2h2aa2|319192|histone cluster 2, H2aa2
mm9_v1_chr1_-_55136989_55137052	0.00339858	RUNX1..3.p2	
mm9_v1_chr5_+_30062437_30062485	0.00327786	RUNX1..3.p2	NM_001037940|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6	NM_001037941|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6	NM_001127367|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6	NM_011847|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6	AK134387|Dnajb6|23950|DnaJ (Hsp40) homolog, subfamily B, member 6
mm9_v1_chr15_-_84818368_84818512	0.00316367	RUNX1..3.p2	AK149782|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene	NM_001033273|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene	AK170532|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene
mm9_v1_chr11_-_43649708_43649999	0.00312341	RUNX1..3.p2	BC138653|Adra1b|11548|adrenergic receptor, alpha 1b	BC138654|Adra1b|11548|adrenergic receptor, alpha 1b	AK043877|Adra1b|11548|adrenergic receptor, alpha 1b	NM_007416|Adra1b|11548|adrenergic receptor, alpha 1b	AK139448|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr16_-_98072833_98072833	0.00304956	RUNX1..3.p2	NM_144789|Prdm15|114604|PR domain containing 15
mm9_v1_chr1_-_195027508_195027739	0.00299554	RUNX1..3.p2	AK036608|Traf3ip3|215243|TRAF3 interacting protein 3	BC036561|Traf3ip3|215243|TRAF3 interacting protein 3	AK031400|Traf3ip3|215243|TRAF3 interacting protein 3	AK080080|Traf3ip3|215243|TRAF3 interacting protein 3	AK041994|Traf3ip3|215243|TRAF3 interacting protein 3	NM_153137|Traf3ip3|215243|TRAF3 interacting protein 3
mm9_v1_chr11_-_101285982_101286065	0.00297575	RUNX1..3.p2	BC141198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr16_-_96343290_96343364	0.00293065	RUNX1..3.p2	
mm9_v1_chr9_+_14589122_14589203	0.00287189	RUNX1..3.p2	AK141214|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	BC065144|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	NM_018736|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)	AK041248|Mre11a|17535|meiotic recombination 11 homolog A (S. cerevisiae)
mm9_v1_chr4_+_128820458_128820467	0.00282625	RUNX1..3.p2	AK137327|Fndc5|384061|fibronectin type III domain containing 5
mm9_v1_chr17_-_46888942_46888996	0.00281838	RUNX1..3.p2	AK220209|Cnpy3|72029|canopy 3 homolog (zebrafish)	AK031742|Cnpy3|72029|canopy 3 homolog (zebrafish)
mm9_v1_chr17_+_46339730_46339822	0.0027804	RUNX1..3.p2	BC092371|Xpo5|72322|exportin 5	BC055455|Xpo5|72322|exportin 5	AK010389|Xpo5|72322|exportin 5	AF343581|Xpo5|72322|exportin 5	NM_028198|Xpo5|72322|exportin 5	BC131660|Xpo5|72322|exportin 5	BC131661|Xpo5|72322|exportin 5
mm9_v1_chr10_-_126558207_126558220	0.00271196	RUNX1..3.p2	NM_001171026|Os9|216440|amplified in osteosarcoma	NM_177614|Os9|216440|amplified in osteosarcoma
mm9_v1_chr10_+_126952029_126952034	0.00267842	RUNX1..3.p2	BC064011|Ndufa4l2|407790|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	BC099496|Ndufa4l2|407790|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
mm9_v1_chr15_+_99532698_99532771	0.00260389	RUNX1..3.p2	NM_031842|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC059921|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	M25773|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66620|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC079839|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr9_+_68501551_68501608	0.00248038	RUNX1..3.p2	AK086033|Rora|19883|RAR-related orphan receptor alpha	NM_013646|Rora|19883|RAR-related orphan receptor alpha	U53228|Rora|19883|RAR-related orphan receptor alpha
mm9_v1_chr5_-_136386045_136386060	0.00244856	RUNX1..3.p2	AK179188|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK181145|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	AK191464|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr5_+_125343060_125343124	0.00228143	RUNX1..3.p2	AK143192|Zfp664|269704|zinc finger protein 664	AK086580|Zfp664|269704|zinc finger protein 664	AK039671|Zfp664|269704|zinc finger protein 664	NM_001081750|Zfp664|269704|zinc finger protein 664	AK165974|Zfp664|269704|zinc finger protein 664
mm9_v1_chr9_-_103595136_103595138	0.00223587	RUNX1..3.p2	AK132350|Tmem108|81907|transmembrane protein 108
mm9_v1_chr8_+_96335202_96335227	0.00215347	RUNX1..3.p2	M36778|Gnao1|14681|guanine nucleotide binding protein, alpha O	M36777|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr3_-_87067445_87067682	0.00205728	RUNX1..3.p2	AK034125|Fcrls|80891|Fc receptor-like S, scavenger receptor	NM_030707|Fcrls|80891|Fc receptor-like S, scavenger receptor	AF329486|Fcrls|80891|Fc receptor-like S, scavenger receptor	AB028174|Fcrls|80891|Fc receptor-like S, scavenger receptor	AK076123|Fcrls|80891|Fc receptor-like S, scavenger receptor	AY506556|Fcrls|80891|Fc receptor-like S, scavenger receptor	AY506557|Fcrls|80891|Fc receptor-like S, scavenger receptor	BC016551|Fcrls|80891|Fc receptor-like S, scavenger receptor	AF302046|Fcrls|80891|Fc receptor-like S, scavenger receptor
mm9_v1_chr7_+_107855215_107855319	0.00199767	RUNX1..3.p2	BC079886|Fam168a|319604|family with sequence similarity 168, member A	NM_178764|Fam168a|319604|family with sequence similarity 168, member A	AK043356|Fam168a|319604|family with sequence similarity 168, member A	AK047153|Fam168a|319604|family with sequence similarity 168, member A	AK048559|Fam168a|319604|family with sequence similarity 168, member A	AK051453|Fam168a|319604|family with sequence similarity 168, member A	AK084931|Fam168a|319604|family with sequence similarity 168, member A	AK137424|Fam168a|319604|family with sequence similarity 168, member A
mm9_v1_chr2_-_84567398_84567416	0.00192098	RUNX1..3.p2	AK145209|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK077647|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)
mm9_v1_chr13_-_104564553_104564699	0.00159769	RUNX1..3.p2	AK039311|Srsf12|218543|serine/arginine-rich splicing factor 12	AK052265|Srsf12|218543|serine/arginine-rich splicing factor 12
mm9_v1_chr11_+_68715045_68715136	0.00157942	RUNX1..3.p2	NM_009080|Rpl26|19941|ribosomal protein L26	AK146113|Rpl26|19941|ribosomal protein L26	X80699|Gm15772|100034726|ribosomal protein L26 pseudogene	AK152589|Rpl26|19941|ribosomal protein L26	AK146116|Gm15772|100034726|ribosomal protein L26 pseudogene	AK169131|Rpl26|19941|ribosomal protein L26	AK167245|Rpl26|19941|ribosomal protein L26	AK135286|Rpl26|19941|ribosomal protein L26	BC099481|Rpl26|19941|ribosomal protein L26	BC070397|Rpl26|19941|ribosomal protein L26
mm9_v1_chr10_-_74495269_74495330	0.00147503	RUNX1..3.p2	BC147792|Rtdr1|71236|rhabdoid tumor deletion region gene 1	BC147801|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163534|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163535|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK017008|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK077078|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163533|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_027730|Rtdr1|71236|rhabdoid tumor deletion region gene 1
mm9_v1_chr2_+_120435110_120435179	0.00140586	RUNX1..3.p2	AK012086|Haus2|66296|HAUS augmin-like complex, subunit 2	AK012779|Haus2|66296|HAUS augmin-like complex, subunit 2	AK132300|Haus2|66296|HAUS augmin-like complex, subunit 2	AK010445|Haus2|66296|HAUS augmin-like complex, subunit 2	AK012960|Haus2|66296|HAUS augmin-like complex, subunit 2	NM_025475|Haus2|66296|HAUS augmin-like complex, subunit 2	BC086677|Haus2|66296|HAUS augmin-like complex, subunit 2
mm9_v1_chr11_-_116029436_116029514	0.00122114	RUNX1..3.p2	AK086991|Fbf1|217335|Fas (TNFRSF6) binding factor 1	AK170147|Fbf1|217335|Fas (TNFRSF6) binding factor 1	BC092220|Fbf1|217335|Fas (TNFRSF6) binding factor 1	NM_172571|Fbf1|217335|Fas (TNFRSF6) binding factor 1
mm9_v1_chrM_+_7714_7790	0.00110375	RUNX1..3.p2	AF093677|ATP6|17705|ATP synthase F0 subunit 6	BC069931|Gm10925|100191075|predicted gene 10925
mm9_v1_chr18_-_55149819_55149833	0.00105988	RUNX1..3.p2	AK051334|Zfp608|269023|zinc finger protein 608	NM_175751|Zfp608|269023|zinc finger protein 608
mm9_v1_chr8_-_14090298_14090330	0.000984334	RUNX1..3.p2	AK147828|Erich1|234086|glutamate-rich 1	NM_001034862|Erich1|234086|glutamate-rich 1
mm9_v1_chr2_-_18314387_18314456	0.000858372	RUNX1..3.p2	AK144228|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	BC080300|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	AK133582|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	AK012505|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_001190817|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_007869|Dnajc1|13418|DnaJ (Hsp40) homolog, subfamily C, member 1
mm9_v1_chr7_-_31230463_31230562	0.000636388	RUNX1..3.p2	BC106158|Aplp1|11803|amyloid beta (A4) precursor-like protein 1	AK170818|Aplp1|11803|amyloid beta (A4) precursor-like protein 1	AK160871|Aplp1|11803|amyloid beta (A4) precursor-like protein 1	AK154992|Aplp1|11803|amyloid beta (A4) precursor-like protein 1
mm9_v1_chr3_+_122432075_122432112	0.000616165	RUNX1..3.p2	AF541937|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	NM_153422|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC119137|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC120486|Pde5a|242202|phosphodiesterase 5A, cGMP-specific
mm9_v1_chr9_+_72892697_72892708	0.000587692	RUNX1..3.p2	AK010373|Rab27a|11891|RAB27A, member RAS oncogene family
mm9_v1_chr18_+_35966147_35966251	0.000495434	RUNX1..3.p2	AK075844|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2
mm9_v1_chr6_-_37249957_37249977	0.000494173	RUNX1..3.p2	AK081360|Dgki|320127|diacylglycerol kinase, iota	NM_001081206|Dgki|320127|diacylglycerol kinase, iota
mm9_v1_chr5_+_150214323_150214348	0.00026773	RUNX1..3.p2	AK047657|6330406I15Rik|70717|RIKEN cDNA 6330406I15 gene	AK053969|6330406I15Rik|70717|RIKEN cDNA 6330406I15 gene	AB055406|6330406I15Rik|70717|RIKEN cDNA 6330406I15 gene
mm9_v1_chr9_+_65142065_65142184	0.000220876	RUNX1..3.p2	NM_001044389|Clpx|270166|caseinolytic peptidase X (E.coli)	NM_011802|Clpx|270166|caseinolytic peptidase X (E.coli)	BC061153|Clpx|270166|caseinolytic peptidase X (E.coli)	AK041024|Clpx|270166|caseinolytic peptidase X (E.coli)	AK087848|Clpx|270166|caseinolytic peptidase X (E.coli)	AF134983|Clpx|270166|caseinolytic peptidase X (E.coli)	AK165208|Clpx|270166|caseinolytic peptidase X (E.coli)	AK080339|Clpx|270166|caseinolytic peptidase X (E.coli)	AJ276991|Clpx|270166|caseinolytic peptidase X (E.coli)
mm9_v1_chr5_-_136674768_136674835	9.07313e-05	RUNX1..3.p2	AK018438|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	BC027503|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	AK010359|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	AK088862|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	AK010961|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	NM_025774|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)
