mm9_v1_chr15_-_56526052_56526100	5.22556	UUGGCAA	U52524|Has2|15117|hyaluronan synthase 2	BC080281|Has2|15117|hyaluronan synthase 2	U69695|Has2|15117|hyaluronan synthase 2	AK045020|Has2|15117|hyaluronan synthase 2	AK079729|Has2|15117|hyaluronan synthase 2	NM_008216|Has2|15117|hyaluronan synthase 2
mm9_v1_chr2_+_37372112_37372145	4.33867	UUGGCAA	AK141999|Gpr21|338346|G protein-coupled receptor 21	AK048682|Gpr21|338346|G protein-coupled receptor 21	AK139361|Gpr21|338346|G protein-coupled receptor 21	NM_177383|Gpr21|338346|G protein-coupled receptor 21
mm9_v1_chr2_-_65405546_65405588	3.40528	UUGGCAA	AK148881|Scn3a|20269|sodium channel, voltage-gated, type III, alpha	NM_018732|Scn3a|20269|sodium channel, voltage-gated, type III, alpha
mm9_v1_chr1_-_157264398_157264577	3.13257	UUGGCAA	AK147403|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC153872|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF114753|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC075721|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AK141660|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	NM_011273|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1
mm9_v1_chr11_-_95867076_95867257	2.96844	UUGGCAA	AF061569|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	AK044850|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	AK013940|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	BC051679|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	NM_009951|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1
mm9_v1_chr1_-_90598670_90598781	2.9539	UUGGCAA	AK080335|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080380|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080743|Arl4c|320982|ADP-ribosylation factor-like 4C	BC055769|Arl4c|320982|ADP-ribosylation factor-like 4C	NM_177305|Arl4c|320982|ADP-ribosylation factor-like 4C
mm9_v1_chr7_+_69521858_69521905	2.61143	UUGGCAA	NM_013779|Magel2|27385|melanoma antigen, family L, 2	BC062913|Magel2|27385|melanoma antigen, family L, 2	AK086725|Magel2|27385|melanoma antigen, family L, 2	AK082944|Magel2|27385|melanoma antigen, family L, 2
mm9_v1_chr2_+_61642509_61642690	2.5378	UUGGCAA	BC052737|Tbr1|21375|T-box brain gene 1	NM_009322|Tbr1|21375|T-box brain gene 1	AK158835|Tbr1|21375|T-box brain gene 1	BC058399|Tbr1|21375|T-box brain gene 1	U49251|Tbr1|21375|T-box brain gene 1
mm9_v1_chr1_+_189821727_189821874	2.5247	UUGGCAA	BC082324|Esrrg|26381|estrogen-related receptor gamma	NM_011935|Esrrg|26381|estrogen-related receptor gamma	AB093266|Esrrg|26381|estrogen-related receptor gamma	AF117254|Esrrg|26381|estrogen-related receptor gamma	AB221580|Esrrg|26381|estrogen-related receptor gamma
mm9_v1_chr14_-_80171003_80171120	2.48887	UUGGCAA	AK140407|Pcdh8|18530|protocadherin 8	AF231125|Pcdh8|18530|protocadherin 8	BC052388|Pcdh8|18530|protocadherin 8	BC053008|Pcdh8|18530|protocadherin 8	AK048638|Pcdh8|18530|protocadherin 8	AK049982|Pcdh8|18530|protocadherin 8	NM_001042726|Pcdh8|18530|protocadherin 8	NM_021543|Pcdh8|18530|protocadherin 8
mm9_v1_chr16_-_65562921_65563010	2.38438	UUGGCAA	AK084111|Chmp2b|68942|chromatin modifying protein 2B	NM_026879|Chmp2b|68942|chromatin modifying protein 2B	BC055809|Chmp2b|68942|chromatin modifying protein 2B
mm9_v1_chr2_+_65683823_65683911	2.30868	UUGGCAA	NM_153409|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	NM_178634|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	EF210820|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK039150|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK082649|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK020730|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK080761|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	BC055701|Csrnp3|77771|cysteine-serine-rich nuclear protein 3
mm9_v1_chr6_+_15135505_15135508	2.30637	UUGGCAA	BC062926|Foxp2|114142|forkhead box P2	NM_212435|Foxp2|114142|forkhead box P2	BC058960|Foxp2|114142|forkhead box P2
mm9_v1_chr9_+_47338431_47338446	2.2544	UUGGCAA	AB052293|Cadm1|54725|cell adhesion molecule 1	AB377192|Cadm1|54725|cell adhesion molecule 1	AK053839|Cadm1|54725|cell adhesion molecule 1	NM_001025600|Cadm1|54725|cell adhesion molecule 1	NM_018770|Cadm1|54725|cell adhesion molecule 1	NM_207675|Cadm1|54725|cell adhesion molecule 1	NM_207676|Cadm1|54725|cell adhesion molecule 1	AF539424|Cadm1|54725|cell adhesion molecule 1	BC095986|Cadm1|54725|cell adhesion molecule 1	BC069937|Cadm1|54725|cell adhesion molecule 1	BC057125|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr6_+_71657791_71657963	2.24532	UUGGCAA	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr11_-_11937330_11937512	2.15828	UUGGCAA	AK030727|Grb10|14783|growth factor receptor bound protein 10	BC053842|Grb10|14783|growth factor receptor bound protein 10	AF022072|Grb10|14783|growth factor receptor bound protein 10	AK012646|Grb10|14783|growth factor receptor bound protein 10	AK163841|Grb10|14783|growth factor receptor bound protein 10	AK032927|Grb10|14783|growth factor receptor bound protein 10	NM_010345|Grb10|14783|growth factor receptor bound protein 10	FJ425892|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr6_+_17015148_17015148	2.02213	UUGGCAA	NM_207176|Tes|21753|testis derived transcript
mm9_v1_chr1_+_19198994_19199078	2.01807	UUGGCAA	AK017373|Tcfap2b|21419|transcription factor AP-2 beta	NM_009334|Tcfap2b|21419|transcription factor AP-2 beta	AK005128|Tcfap2b|21419|transcription factor AP-2 beta	AK028906|Tcfap2b|21419|transcription factor AP-2 beta	X78197|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr4_+_104040160_104040194	1.91032	UUGGCAA	NM_010014|Dab1|13131|disabled homolog 1 (Drosophila)	NM_177259|Dab1|13131|disabled homolog 1 (Drosophila)	Y08379|Dab1|13131|disabled homolog 1 (Drosophila)	Y08380|Dab1|13131|disabled homolog 1 (Drosophila)	Y08381|Dab1|13131|disabled homolog 1 (Drosophila)
mm9_v1_chr6_+_14851348_14851478	1.8761	UUGGCAA	NM_053242|Foxp2|114142|forkhead box P2	AK051668|Foxp2|114142|forkhead box P2	AK085080|Foxp2|114142|forkhead box P2	AK080549|Foxp2|114142|forkhead box P2
mm9_v1_chr10_+_86241749_86241796	1.84682	UUGGCAA	NM_175331|Nt5dc3|103466|5'-nucleotidase domain containing 3	AK147488|Nt5dc3|103466|5'-nucleotidase domain containing 3	AK172248|Nt5dc3|103466|5'-nucleotidase domain containing 3
mm9_v1_chr4_-_91042997_91043190	1.83749	UUGGCAA	AK149201|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	AK141919|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001177883|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr1_+_160292470_160292548	1.81273	UUGGCAA	AK164117|Astn1|11899|astrotactin 1	NM_007495|Astn1|11899|astrotactin 1	BC094666|Astn1|11899|astrotactin 1
mm9_v1_chr10_+_101621491_101621538	1.79214	UUGGCAA	NM_001162368|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK015051|4930402I19Rik|73798|RIKEN cDNA 4930402I19 gene
mm9_v1_chr5_+_31014229_31014273	1.78862	UUGGCAA	AK044866|Dpysl5|65254|dihydropyrimidinase-like 5	BC065054|Dpysl5|65254|dihydropyrimidinase-like 5	NM_023047|Dpysl5|65254|dihydropyrimidinase-like 5	BC103789|Dpysl5|65254|dihydropyrimidinase-like 5
mm9_v1_chr17_-_36046961_36047023	1.70641	UUGGCAA	AK049682|Atat1|73242|alpha tubulin acetyltransferase 1	AK014265|Atat1|73242|alpha tubulin acetyltransferase 1	AK011750|Atat1|73242|alpha tubulin acetyltransferase 1	AK034725|Atat1|73242|alpha tubulin acetyltransferase 1	AK133694|Atat1|73242|alpha tubulin acetyltransferase 1	BC030669|Atat1|73242|alpha tubulin acetyltransferase 1	AK011350|Atat1|73242|alpha tubulin acetyltransferase 1	BC028847|Atat1|73242|alpha tubulin acetyltransferase 1	AK011838|Atat1|73242|alpha tubulin acetyltransferase 1	AK028297|Atat1|73242|alpha tubulin acetyltransferase 1	NM_001142744|Atat1|73242|alpha tubulin acetyltransferase 1	NM_001142745|Atat1|73242|alpha tubulin acetyltransferase 1	NM_028476|Atat1|73242|alpha tubulin acetyltransferase 1
mm9_v1_chr4_-_109960078_109960115	1.69441	UUGGCAA	BC052451|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AF041342|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK079088|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001038698|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr9_+_102620096_102620187	1.67415	UUGGCAA	AK141348|Amotl2|56332|angiomotin-like 2	AK164819|Amotl2|56332|angiomotin-like 2	NM_019764|Amotl2|56332|angiomotin-like 2	AK077535|Amotl2|56332|angiomotin-like 2	AK169419|Amotl2|56332|angiomotin-like 2	BC035201|Amotl2|56332|angiomotin-like 2	BC027824|Amotl2|56332|angiomotin-like 2
mm9_v1_chr14_+_12386043_12386066	1.66892	UUGGCAA	BC079595|Ptprg|19270|protein tyrosine phosphatase, receptor type, G	NM_008981|Ptprg|19270|protein tyrosine phosphatase, receptor type, G
mm9_v1_chr1_-_107253245_107253286	1.65428	UUGGCAA	AK044638|Rnf152|320311|ring finger protein 152	NM_001160368|Rnf152|320311|ring finger protein 152	NM_178779|Rnf152|320311|ring finger protein 152
mm9_v1_chrX_+_139952975_139953253	1.60759	UUGGCAA	AK158893|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	NM_001195048|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	AK031853|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chrX_+_71574403_71574439	1.5809	UUGGCAA	NM_008883|Plxna3|18846|plexin A3	BC093482|Plxna3|18846|plexin A3	D86950|Plxna3|18846|plexin A3
mm9_v1_chr10_+_68996455_68996596	1.57534	UUGGCAA	NM_146005|Ank3|11735|ankyrin 3, epithelial	NM_170688|Ank3|11735|ankyrin 3, epithelial	NM_170689|Ank3|11735|ankyrin 3, epithelial	NM_170690|Ank3|11735|ankyrin 3, epithelial	NM_170728|Ank3|11735|ankyrin 3, epithelial	NM_170729|Ank3|11735|ankyrin 3, epithelial	NM_170730|Ank3|11735|ankyrin 3, epithelial	AK162547|Ank3|11735|ankyrin 3, epithelial	AK042330|Ank3|11735|ankyrin 3, epithelial	BC021657|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr2_-_52414072_52414117	1.57189	UUGGCAA	AK043850|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK079616|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK038633|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_146123|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chrX_-_71126088_71126172	1.56217	UUGGCAA	BC056988|L1cam|16728|L1 cell adhesion molecule	AK139407|L1cam|16728|L1 cell adhesion molecule	NM_008478|L1cam|16728|L1 cell adhesion molecule
mm9_v1_chr18_-_75120759_75120936	1.55672	UUGGCAA	BC020991|Lipg|16891|lipase, endothelial	AF118768|Lipg|16891|lipase, endothelial	AK090224|Lipg|16891|lipase, endothelial	AK152430|Lipg|16891|lipase, endothelial	AK152161|Lipg|16891|lipase, endothelial	AK153541|Lipg|16891|lipase, endothelial	AK152872|Lipg|16891|lipase, endothelial	AK172101|Lipg|16891|lipase, endothelial	NM_010720|Lipg|16891|lipase, endothelial
mm9_v1_chrX_+_55283804_55283819	1.53201	UUGGCAA	AK139364|Zic3|22773|zinc finger protein of the cerebellum 3	NM_009575|Zic3|22773|zinc finger protein of the cerebellum 3
mm9_v1_chr8_-_30330079_30330107	1.4639	UUGGCAA	AJ487854|Unc5d|210801|unc-5 homolog D (C. elegans)	NM_153135|Unc5d|210801|unc-5 homolog D (C. elegans)
mm9_v1_chr3_+_98186380_98186408	1.45875	UUGGCAA	AK034880|Zfp697|242109|zinc finger protein 697	AK086791|Zfp697|242109|zinc finger protein 697	NM_172863|Zfp697|242109|zinc finger protein 697
mm9_v1_chr1_-_145851257_145851282	1.44689	UUGGCAA	AF432916|Rgs2|19735|regulator of G-protein signaling 2	BC023001|Rgs2|19735|regulator of G-protein signaling 2	AF215668|Rgs2|19735|regulator of G-protein signaling 2	U67187|Rgs2|19735|regulator of G-protein signaling 2	AK029310|Rgs2|19735|regulator of G-protein signaling 2	AK031603|Rgs2|19735|regulator of G-protein signaling 2	AK077922|Rgs2|19735|regulator of G-protein signaling 2	AK162276|Rgs2|19735|regulator of G-protein signaling 2	NM_009061|Rgs2|19735|regulator of G-protein signaling 2
mm9_v1_chr6_+_103460834_103460869	1.44407	UUGGCAA	AK040765|Chl1|12661|cell adhesion molecule with homology to L1CAM	NM_007697|Chl1|12661|cell adhesion molecule with homology to L1CAM
mm9_v1_chrX_-_140367467_140367853	1.377	UUGGCAA	AY560329|Dcx|13193|doublecortin	AK048410|Dcx|13193|doublecortin	AF045547|Dcx|13193|doublecortin	AK164119|Dcx|13193|doublecortin	BC056391|Dcx|13193|doublecortin	AK049050|Dcx|13193|doublecortin	NM_001110222|Dcx|13193|doublecortin	BC057010|Dcx|13193|doublecortin	BC062974|Dcx|13193|doublecortin	AK014264|Dcx|13193|doublecortin	NM_001110223|Dcx|13193|doublecortin	NM_001110224|Dcx|13193|doublecortin	NM_010025|Dcx|13193|doublecortin	AB011678|Dcx|13193|doublecortin
mm9_v1_chr16_-_67621054_67621188	1.35043	UUGGCAA	AK046800|Cadm2|239857|cell adhesion molecule 2	AK163636|Cadm2|239857|cell adhesion molecule 2	AK038842|Cadm2|239857|cell adhesion molecule 2	AK043760|Cadm2|239857|cell adhesion molecule 2	AK165030|Cadm2|239857|cell adhesion molecule 2	NM_001145977|Cadm2|239857|cell adhesion molecule 2	NM_178721|Cadm2|239857|cell adhesion molecule 2
mm9_v1_chr12_-_32398730_32398790	1.30931	UUGGCAA	AK140577|Gpr22|73010|G protein-coupled receptor 22	AK034194|Gpr22|73010|G protein-coupled receptor 22	AK013755|Gpr22|73010|G protein-coupled receptor 22	AK048077|Gpr22|73010|G protein-coupled receptor 22	AK141569|Gpr22|73010|G protein-coupled receptor 22	BC089509|Gpr22|73010|G protein-coupled receptor 22	NM_175191|Gpr22|73010|G protein-coupled receptor 22
mm9_v1_chrX_+_132373572_132373652	1.2947	UUGGCAA	NM_001163015|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	NM_001163016|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	NM_001163017|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	AK030638|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	AK081764|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	BC117924|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2	BC117923|Gprasp2|245607|G protein-coupled receptor associated sorting protein 2
mm9_v1_chr6_-_93863547_93863683	1.29247	UUGGCAA	AK163800|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083321|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC060273|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083320|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr15_-_84388245_84388282	1.27154	UUGGCAA	BC094559|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like	NM_177630|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like
mm9_v1_chr5_+_23606402_23606481	1.2682	UUGGCAA	NM_001161800|Klhl7|52323|kelch-like 7 (Drosophila)	NM_026448|Klhl7|52323|kelch-like 7 (Drosophila)	AK083358|Klhl7|52323|kelch-like 7 (Drosophila)	AK089072|Klhl7|52323|kelch-like 7 (Drosophila)	AK012326|Klhl7|52323|kelch-like 7 (Drosophila)	BC029154|Klhl7|52323|kelch-like 7 (Drosophila)	AK082520|Klhl7|52323|kelch-like 7 (Drosophila)
mm9_v1_chr11_+_29273673_29273774	1.26351	UUGGCAA	AK051140|Ccdc88a|108686|coiled coil domain containing 88A	NM_176841|Ccdc88a|108686|coiled coil domain containing 88A
mm9_v1_chr2_+_3035629_3035684	1.2463	UUGGCAA	NM_001081161|Fam171a1|269233|family with sequence similarity 171, member A1	AK032237|Fam171a1|269233|family with sequence similarity 171, member A1
mm9_v1_chr5_+_30559138_30559249	1.22881	UUGGCAA	NM_027652|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK040494|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK079325|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK083973|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK140416|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC106097|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK048011|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK014530|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC115783|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC117551|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK122544|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK040745|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm9_v1_chr1_+_57831651_57831771	1.22838	UUGGCAA	NM_144882|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK012791|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK019292|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK161988|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK031266|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	BC021879|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK032169|Spats2l|67198|spermatogenesis associated, serine-rich 2-like
mm9_v1_chr6_-_31513817_31513936	1.18292	UUGGCAA	AB028048|Podxl|27205|podocalyxin-like	AF290209|Podxl|27205|podocalyxin-like	BC052442|Podxl|27205|podocalyxin-like	BC054530|Podxl|27205|podocalyxin-like	NM_013723|Podxl|27205|podocalyxin-like
mm9_v1_chr7_+_3289029_3289038	1.1801	UUGGCAA	NM_001093764|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr3_+_108394195_108394337	1.17207	UUGGCAA	NM_181400|Wdr47|99512|WD repeat domain 47	AK047357|Wdr47|99512|WD repeat domain 47	AK163422|Wdr47|99512|WD repeat domain 47	BC040337|Wdr47|99512|WD repeat domain 47
mm9_v1_chr15_-_37389073_37389150	1.16559	UUGGCAA	BC026979|Ncald|52589|neurocalcin delta	AK167313|Ncald|52589|neurocalcin delta	AK034031|Ncald|52589|neurocalcin delta	NM_001170867|Ncald|52589|neurocalcin delta	NM_001170868|Ncald|52589|neurocalcin delta
mm9_v1_chr12_+_72932064_72932126	1.16541	UUGGCAA	BC076585|Daam1|208846|dishevelled associated activator of morphogenesis 1	NM_026102|Daam1|208846|dishevelled associated activator of morphogenesis 1	NM_172464|Daam1|208846|dishevelled associated activator of morphogenesis 1	AK129185|Daam1|208846|dishevelled associated activator of morphogenesis 1	AK165335|Daam1|208846|dishevelled associated activator of morphogenesis 1	BC038403|Daam1|208846|dishevelled associated activator of morphogenesis 1
mm9_v1_chrX_-_61530170_61530177	1.09363	UUGGCAA	AK053065|Slitrk4|245446|SLIT and NTRK-like family, member 4	NM_178740|Slitrk4|245446|SLIT and NTRK-like family, member 4
mm9_v1_chr1_+_61685397_61685574	1.06225	UUGGCAA	AK013352|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	NM_001081050|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK051398|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK031487|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK141451|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK008055|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)
mm9_v1_chr16_-_17928270_17928336	1.04545	UUGGCAA	AK159289|Slc25a1|13358|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	AK170191|Slc25a1|13358|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	NM_153150|Slc25a1|13358|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm9_v1_chrX_+_98835386_98835624	1.04153	UUGGCAA	AK076418|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_139144|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AK163296|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC025097|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC057319|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC037194|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC055851|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AF363030|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm9_v1_chr8_+_114060341_114060576	1.03251	UUGGCAA	AK079338|Znrf1|170737|zinc and ring finger 1	NM_001168621|Znrf1|170737|zinc and ring finger 1	NM_001168622|Znrf1|170737|zinc and ring finger 1	NM_133206|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr11_+_86940545_86940631	1.03082	UUGGCAA	AK140822|Trim37|68729|tripartite motif-containing 37	BC058678|Trim37|68729|tripartite motif-containing 37	NM_197987|Trim37|68729|tripartite motif-containing 37	BC078416|Trim37|68729|tripartite motif-containing 37	BC059070|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr1_-_158869650_158869756	1.02863	UUGGCAA	BC043132|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	BC052663|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK169368|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK018622|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029049|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK033549|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK161080|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029993|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK036803|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159965|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159967|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159968|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_023884|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr2_+_92439758_92439886	1.02856	UUGGCAA	NM_023850|Chst1|76969|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
mm9_v1_chr11_+_117193004_117193053	0.999995	UUGGCAA	NM_017380|Sept9|53860|septin 9	AJ250723|Sept9|53860|septin 9
mm9_v1_chr16_+_11984205_11984205	0.998556	UUGGCAA	AK012380|Shisa9|72555|shisa homolog 9 (Xenopus laevis)	NM_001174086|Shisa9|72555|shisa homolog 9 (Xenopus laevis)	NM_028277|Shisa9|72555|shisa homolog 9 (Xenopus laevis)
mm9_v1_chr5_+_130620730_130620855	0.992338	UUGGCAA	AK162568|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK083583|Kctd7|212919|potassium channel tetramerisation domain containing 7	NM_172509|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK029942|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK034583|Kctd7|212919|potassium channel tetramerisation domain containing 7	AK140606|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC139070|Kctd7|212919|potassium channel tetramerisation domain containing 7	BC141201|Kctd7|212919|potassium channel tetramerisation domain containing 7
mm9_v1_chr15_-_27955602_27955621	0.990426	UUGGCAA	NM_001081302|Trio|223435|triple functional domain (PTPRF interacting)
mm9_v1_chr1_+_7079000_7079035	0.983545	UUGGCAA	NM_183028|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr10_+_126602182_126602286	0.963105	UUGGCAA	AK144484|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC057199|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	NM_008080|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC019969|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr3_+_33919000_33919031	0.95614	UUGGCAA	NM_001113188|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	NM_001113189|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	NM_008053|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	X90875|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	BC019139|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog
mm9_v1_chr2_+_157385835_157385932	0.950581	UUGGCAA	AK003004|Nnat|18111|neuronatin	AK077465|Nnat|18111|neuronatin	AK160626|Nnat|18111|neuronatin	NM_010923|Nnat|18111|neuronatin	NM_180960|Nnat|18111|neuronatin	X83569|Nnat|18111|neuronatin	X83570|Nnat|18111|neuronatin	BC036984|Nnat|18111|neuronatin	AB004048|Nnat|18111|neuronatin	X83568|Nnat|18111|neuronatin
mm9_v1_chr3_+_32716447_32716547	0.938757	UUGGCAA	AK135141|Usp13|72607|ubiquitin specific peptidase 13 (isopeptidase T-3)	BC090999|Usp13|72607|ubiquitin specific peptidase 13 (isopeptidase T-3)	NM_001013024|Usp13|72607|ubiquitin specific peptidase 13 (isopeptidase T-3)
mm9_v1_chr9_-_62659364_62659454	0.933229	UUGGCAA	AB022863|Fem1b|14155|feminization 1 homolog b (C. elegans)	BC068236|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK149329|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK032338|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK132692|Fem1b|14155|feminization 1 homolog b (C. elegans)	NM_010193|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr14_-_103746016_103746030	0.922931	UUGGCAA	AK149225|Mycbp2|105689|MYC binding protein 2	NM_207215|Mycbp2|105689|MYC binding protein 2	AK048441|Mycbp2|105689|MYC binding protein 2	AK081652|Mycbp2|105689|MYC binding protein 2
mm9_v1_chr3_-_122322556_122322614	0.920138	UUGGCAA	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr3_-_153388047_153388152	0.912525	UUGGCAA	BC131987|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC132317|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC058387|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK034804|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_011372|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	Y11342|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm9_v1_chr16_+_30065419_30065442	0.906886	UUGGCAA	AK133538|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	AK132536|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC018375|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC051428|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	NM_008235|Hes1|15205|hairy and enhancer of split 1 (Drosophila)
mm9_v1_chr13_-_36826245_36826363	0.890909	UUGGCAA	AK161859|Nrn1|68404|neuritin 1	BC035531|Nrn1|68404|neuritin 1	NM_153529|Nrn1|68404|neuritin 1
mm9_v1_chr19_-_17912073_17912162	0.883515	UUGGCAA	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr4_+_8462766_8462804	0.882684	UUGGCAA	AK159607|Rab2a|59021|RAB2A, member RAS oncogene family	AK079071|Rab2a|59021|RAB2A, member RAS oncogene family	AK160333|Rab2a|59021|RAB2A, member RAS oncogene family	NM_021518|Rab2a|59021|RAB2A, member RAS oncogene family	BC058382|Rab2a|59021|RAB2A, member RAS oncogene family	X95403|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr2_-_121632749_121632811	0.876863	UUGGCAA	AK054484|Frmd5|228564|FERM domain containing 5	BC062889|Frmd5|228564|FERM domain containing 5	AK146383|Frmd5|228564|FERM domain containing 5	AK048865|Frmd5|228564|FERM domain containing 5	NM_172673|Frmd5|228564|FERM domain containing 5
mm9_v1_chr15_-_63891810_63892112	0.864778	UUGGCAA	AK075613|Fam49b|223601|family with sequence similarity 49, member B	AK043641|Fam49b|223601|family with sequence similarity 49, member B	AK028062|Fam49b|223601|family with sequence similarity 49, member B	NM_144846|Fam49b|223601|family with sequence similarity 49, member B
mm9_v1_chr19_+_5490454_5490570	0.844894	UUGGCAA	NM_007687|Cfl1|12631|cofilin 1, non-muscle	AK020471|Cfl1|12631|cofilin 1, non-muscle	D00472|Cfl1|12631|cofilin 1, non-muscle	AK088633|Cfl1|12631|cofilin 1, non-muscle	AK088793|Cfl1|12631|cofilin 1, non-muscle	AK050651|Cfl1|12631|cofilin 1, non-muscle	AK167795|Cfl1|12631|cofilin 1, non-muscle	AK013943|Cfl1|12631|cofilin 1, non-muscle	BC058726|Cfl1|12631|cofilin 1, non-muscle	BC094357|Cfl1|12631|cofilin 1, non-muscle	BC046225|Cfl1|12631|cofilin 1, non-muscle
mm9_v1_chr9_-_75459125_75459169	0.836095	UUGGCAA	AK147581|Tmod2|50876|tropomodulin 2	NM_016711|Tmod2|50876|tropomodulin 2
mm9_v1_chr5_-_114358647_114358779	0.826922	UUGGCAA	BC099671|Coro1c|23790|coronin, actin binding protein 1C	AK037801|Coro1c|23790|coronin, actin binding protein 1C	BC085498|Coro1c|23790|coronin, actin binding protein 1C	AF143957|Coro1c|23790|coronin, actin binding protein 1C	BC019444|Coro1c|23790|coronin, actin binding protein 1C	BC087553|Coro1c|23790|coronin, actin binding protein 1C	AK169262|Coro1c|23790|coronin, actin binding protein 1C	AK151017|Coro1c|23790|coronin, actin binding protein 1C	AK151749|Coro1c|23790|coronin, actin binding protein 1C	AK167089|Coro1c|23790|coronin, actin binding protein 1C	AK159506|Coro1c|23790|coronin, actin binding protein 1C	AK169404|Coro1c|23790|coronin, actin binding protein 1C	BC009126|Coro1c|23790|coronin, actin binding protein 1C	AK082986|Coro1c|23790|coronin, actin binding protein 1C	NM_011779|Coro1c|23790|coronin, actin binding protein 1C	AK088101|Coro1c|23790|coronin, actin binding protein 1C	AK077552|Coro1c|23790|coronin, actin binding protein 1C	AK079327|Coro1c|23790|coronin, actin binding protein 1C
mm9_v1_chr16_-_63863905_63864000	0.821613	UUGGCAA	BC138641|Epha3|13837|Eph receptor A3	BC138643|Epha3|13837|Eph receptor A3	BC145349|Epha3|13837|Eph receptor A3	AK132335|Epha3|13837|Eph receptor A3	BC060164|Epha3|13837|Eph receptor A3	M68513|Epha3|13837|Eph receptor A3	M68515|Epha3|13837|Eph receptor A3	AK084921|Epha3|13837|Eph receptor A3	AK041935|Epha3|13837|Eph receptor A3	AK045219|Epha3|13837|Eph receptor A3	NM_010140|Epha3|13837|Eph receptor A3	BC093483|Epha3|13837|Eph receptor A3	AK089119|Epha3|13837|Eph receptor A3
mm9_v1_chr13_-_117099629_117099895	0.815943	UUGGCAA	AB104633|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AJ132765|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	BC132263|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	BC132609|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK044406|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK090263|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK143052|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	NM_021459|Isl1|16392|ISL1 transcription factor, LIM/homeodomain
mm9_v1_chr4_-_133684599_133684716	0.811217	UUGGCAA	AK003431|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3	BC008110|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3	NM_080559|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3
mm9_v1_chr3_+_45182311_45182350	0.809717	UUGGCAA	BC037259|Pcdh10|18526|protocadherin 10	NM_001098170|Pcdh10|18526|protocadherin 10	NM_001098171|Pcdh10|18526|protocadherin 10	NM_001098172|Pcdh10|18526|protocadherin 10	NM_011043|Pcdh10|18526|protocadherin 10	AK081621|Pcdh10|18526|protocadherin 10	AK081977|Pcdh10|18526|protocadherin 10	BC026712|Pcdh10|18526|protocadherin 10	AK122503|Pcdh10|18526|protocadherin 10
mm9_v1_chr11_-_101327431_101327547	0.801299	UUGGCAA	BC085504|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159310|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC025496|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK170371|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC099678|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154965|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154178|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159315|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK160891|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK034795|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK155342|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	NM_012037|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK145193|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)
mm9_v1_chr10_-_116585527_116585608	0.790848	UUGGCAA	BC043109|Frs2|327826|fibroblast growth factor receptor substrate 2	NM_177798|Frs2|327826|fibroblast growth factor receptor substrate 2	AK028813|Frs2|327826|fibroblast growth factor receptor substrate 2	AK163442|Frs2|327826|fibroblast growth factor receptor substrate 2	BC055334|Frs2|327826|fibroblast growth factor receptor substrate 2	AK138144|Frs2|327826|fibroblast growth factor receptor substrate 2
mm9_v1_chr2_+_37298785_37298902	0.784717	UUGGCAA	NM_146121|Rabgap1|227800|RAB GTPase activating protein 1	AK031315|Rabgap1|227800|RAB GTPase activating protein 1	AK021286|Rabgap1|227800|RAB GTPase activating protein 1	BC138337|Rabgap1|227800|RAB GTPase activating protein 1
mm9_v1_chr11_+_32247758_32247888	0.783691	UUGGCAA	NM_177364|Sh3pxd2b|268396|SH3 and PX domains 2B	AK169978|Sh3pxd2b|268396|SH3 and PX domains 2B	AK220175|Sh3pxd2b|268396|SH3 and PX domains 2B	AK090119|Sh3pxd2b|268396|SH3 and PX domains 2B	AK042261|Sh3pxd2b|268396|SH3 and PX domains 2B	BC141306|Sh3pxd2b|268396|SH3 and PX domains 2B	AK043324|Sh3pxd2b|268396|SH3 and PX domains 2B	AK089330|Sh3pxd2b|268396|SH3 and PX domains 2B	AK163471|Sh3pxd2b|268396|SH3 and PX domains 2B	AK171384|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115711|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115764|Sh3pxd2b|268396|SH3 and PX domains 2B	AK154898|Sh3pxd2b|268396|SH3 and PX domains 2B	AB430861|Sh3pxd2b|268396|SH3 and PX domains 2B
mm9_v1_chr1_-_38954933_38955026	0.781676	UUGGCAA	BC056956|Chst10|98388|carbohydrate sulfotransferase 10	AK047378|Chst10|98388|carbohydrate sulfotransferase 10	NM_145142|Chst10|98388|carbohydrate sulfotransferase 10	AK050676|Chst10|98388|carbohydrate sulfotransferase 10
mm9_v1_chr1_-_138242666_138242682	0.762174	UUGGCAA	AK016014|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK028542|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK053092|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	NM_001081360|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1
mm9_v1_chr2_-_66473008_66473018	0.759321	UUGGCAA	NM_018852|Scn9a|20274|sodium channel, voltage-gated, type IX, alpha	AK141871|Scn9a|20274|sodium channel, voltage-gated, type IX, alpha
mm9_v1_chr16_+_78301923_78302076	0.755144	UUGGCAA	NM_001025192|Cxadr|13052|coxsackie virus and adenovirus receptor	NM_009988|Cxadr|13052|coxsackie virus and adenovirus receptor	AK004908|Cxadr|13052|coxsackie virus and adenovirus receptor	AK145569|Cxadr|13052|coxsackie virus and adenovirus receptor	AK160457|Cxadr|13052|coxsackie virus and adenovirus receptor	BC016457|Cxadr|13052|coxsackie virus and adenovirus receptor	BC004680|Cxadr|13052|coxsackie virus and adenovirus receptor	U90715|Cxadr|13052|coxsackie virus and adenovirus receptor	Y10320|Cxadr|13052|coxsackie virus and adenovirus receptor
mm9_v1_chr14_+_21748646_21748736	0.744073	UUGGCAA	BC008520|Vcl|22330|vinculin	NM_009502|Vcl|22330|vinculin	L18880|Vcl|22330|vinculin
mm9_v1_chr3_-_31209216_31209240	0.742939	UUGGCAA	AK173217|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	BC061928|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	AK044448|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	NM_172861|Slc7a14|241919|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
mm9_v1_chr4_-_6917628_6917956	0.734148	UUGGCAA	AK161718|Tox|252838|thymocyte selection-associated high mobility group box	AK161578|Tox|252838|thymocyte selection-associated high mobility group box	AF472514|Tox|252838|thymocyte selection-associated high mobility group box	AK029694|Tox|252838|thymocyte selection-associated high mobility group box	AK133397|Tox|252838|thymocyte selection-associated high mobility group box	BC080732|Tox|252838|thymocyte selection-associated high mobility group box	AK038671|Tox|252838|thymocyte selection-associated high mobility group box	NM_145711|Tox|252838|thymocyte selection-associated high mobility group box
mm9_v1_chr19_-_50752974_50753135	0.733202	UUGGCAA	AF137367|Sorcs1|58178|VPS10 domain receptor protein SORCS 1	AF195056|Sorcs1|58178|VPS10 domain receptor protein SORCS 1	AF284755|Sorcs1|58178|VPS10 domain receptor protein SORCS 1	NM_021377|Sorcs1|58178|VPS10 domain receptor protein SORCS 1	AK030440|Sorcs1|58178|VPS10 domain receptor protein SORCS 1
mm9_v1_chrX_+_156065141_156065596	0.729407	UUGGCAA	AK049182|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK172022|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK080930|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_001135727|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK038540|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK208632|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr9_+_59426108_59426143	0.722477	UUGGCAA	BC052406|Celf6|76183|CUGBP, Elav-like family member 6	NM_175235|Celf6|76183|CUGBP, Elav-like family member 6
mm9_v1_chr1_-_99558490_99558623	0.720781	UUGGCAA	AK162223|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	AK135656|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	BC019375|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	BC023951|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	AK152370|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	AK168549|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed	NM_133825|D1Ertd622e|52392|DNA segment, Chr 1, ERATO Doi 622, expressed
mm9_v1_chr11_+_90110701_90110805	0.720646	UUGGCAA	AK033889|Mmd|67468|monocyte to macrophage differentiation-associated	AK007961|Mmd|67468|monocyte to macrophage differentiation-associated	BC021914|Mmd|67468|monocyte to macrophage differentiation-associated	NM_026178|Mmd|67468|monocyte to macrophage differentiation-associated
mm9_v1_chr12_-_81213930_81214002	0.716929	UUGGCAA	M58566|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	BC037998|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	BC016621|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK077855|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK021295|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK036950|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK051035|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	NM_007564|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1
mm9_v1_chr14_-_65881225_65881304	0.71309	UUGGCAA	BC066186|Fzd3|14365|frizzled homolog 3 (Drosophila)	BC103714|Fzd3|14365|frizzled homolog 3 (Drosophila)	AK134261|Fzd3|14365|frizzled homolog 3 (Drosophila)	AK160554|Fzd3|14365|frizzled homolog 3 (Drosophila)	BC050965|Fzd3|14365|frizzled homolog 3 (Drosophila)	NM_021458|Fzd3|14365|frizzled homolog 3 (Drosophila)
mm9_v1_chrX_-_71070284_71070317	0.71235	UUGGCAA	AK046101|Pdzd4|245469|PDZ domain containing 4	NM_001029868|Pdzd4|245469|PDZ domain containing 4
mm9_v1_chr1_-_137327006_137327084	0.70612	UUGGCAA	AJ309238|Ipo9|226432|importin 9	AF273672|Ipo9|226432|importin 9	AF273673|Ipo9|226432|importin 9	AK036687|Ipo9|226432|importin 9	BC098508|Ipo9|226432|importin 9	BC056469|Ipo9|226432|importin 9	BC079546|Ipo9|226432|importin 9	NM_153774|Ipo9|226432|importin 9
mm9_v1_chr16_-_17201556_17201596	0.700878	UUGGCAA	AK165620|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	BC106149|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	BC093503|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AK167847|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	BC049075|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AJ130961|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	NM_009456|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	X97042|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AK152522|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3	AK007265|Ube2l3|22195|ubiquitin-conjugating enzyme E2L 3
mm9_v1_chr8_-_49075884_49075954	0.699867	UUGGCAA	AK147648|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	BC067050|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	NM_133791|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	AB045323|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chr11_-_74537877_74537918	0.691886	UUGGCAA	NM_013625|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm9_v1_chr18_-_46887869_46888063	0.691181	UUGGCAA	BC013638|Cdo1|12583|cysteine dioxygenase 1, cytosolic	BC020375|Cdo1|12583|cysteine dioxygenase 1, cytosolic	NM_033037|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK004249|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK011032|Cdo1|12583|cysteine dioxygenase 1, cytosolic	AK149582|Cdo1|12583|cysteine dioxygenase 1, cytosolic
mm9_v1_chr14_-_62058627_62058783	0.68737	UUGGCAA	AF020772|Kpna3|16648|karyopherin (importin) alpha 3	AK011559|Kpna3|16648|karyopherin (importin) alpha 3	AK049373|Kpna3|16648|karyopherin (importin) alpha 3	BC026885|Kpna3|16648|karyopherin (importin) alpha 3	AK161664|Kpna3|16648|karyopherin (importin) alpha 3	NM_008466|Kpna3|16648|karyopherin (importin) alpha 3
mm9_v1_chr16_-_91597886_91597995	0.682358	UUGGCAA	AK098154|Tmem50b|77975|transmembrane protein 50B	AK150773|Tmem50b|77975|transmembrane protein 50B	AK172335|Tmem50b|77975|transmembrane protein 50B	AK170684|Tmem50b|77975|transmembrane protein 50B	BC004841|Tmem50b|77975|transmembrane protein 50B	NM_030018|Tmem50b|77975|transmembrane protein 50B	AK020977|Tmem50b|77975|transmembrane protein 50B	AK152190|Tmem50b|77975|transmembrane protein 50B	AK152767|Tmem50b|77975|transmembrane protein 50B	AK133966|Tmem50b|77975|transmembrane protein 50B	AK151796|Tmem50b|77975|transmembrane protein 50B	AK155082|Tmem50b|77975|transmembrane protein 50B
mm9_v1_chr11_+_87574041_87574047	0.680694	UUGGCAA	AK043747|Bzrap1|207777|benzodiazepine receptor associated protein 1	NM_172449|Bzrap1|207777|benzodiazepine receptor associated protein 1
mm9_v1_chrX_-_101866402_101866402	0.680544	UUGGCAA	AK132304|Zdhhc15|108672|zinc finger, DHHC domain containing 15	NM_175358|Zdhhc15|108672|zinc finger, DHHC domain containing 15
mm9_v1_chr5_-_123350242_123350397	0.677748	UUGGCAA	AK031626|Kdm2b|30841|lysine (K)-specific demethylase 2B	BC057622|Kdm2b|30841|lysine (K)-specific demethylase 2B	NM_013910|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr11_-_12364886_12365020	0.669413	UUGGCAA	AK147366|Cobl|12808|cordon-bleu	AK147633|Cobl|12808|cordon-bleu	NM_172496|Cobl|12808|cordon-bleu
mm9_v1_chr14_-_122138082_122138150	0.65785	UUGGCAA	BC158050|Dock9|105445|dedicator of cytokinesis 9	AK122431|Dock9|105445|dedicator of cytokinesis 9	NM_001128307|Dock9|105445|dedicator of cytokinesis 9	NM_001128308|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr4_+_43970559_43970608	0.65266	UUGGCAA	BC031750|Glipr2|384009|GLI pathogenesis-related 2	NM_027450|Glipr2|384009|GLI pathogenesis-related 2	AK167595|Glipr2|384009|GLI pathogenesis-related 2	AK141459|Glipr2|384009|GLI pathogenesis-related 2	AK154433|Glipr2|384009|GLI pathogenesis-related 2	AK089960|Glipr2|384009|GLI pathogenesis-related 2	AK017557|Glipr2|384009|GLI pathogenesis-related 2
mm9_v1_chr7_-_56892061_56892218	0.624371	UUGGCAA	BC082541|Dbx1|13172|developing brain homeobox 1	NM_001005232|Dbx1|13172|developing brain homeobox 1	S75837|Dbx1|13172|developing brain homeobox 1
mm9_v1_chr11_+_60591019_60591051	0.623876	UUGGCAA	NM_001085440|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	NM_175491|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK052754|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK164045|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK145010|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)	AK083739|Smcr8|237782|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
mm9_v1_chr7_+_53039273_53039322	0.622931	UUGGCAA	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr8_-_92872139_92872206	0.620961	UUGGCAA	AK082602|Tox3|244579|TOX high mobility group box family member 3	NM_172913|Tox3|244579|TOX high mobility group box family member 3
mm9_v1_chr10_+_52137324_52137453	0.619829	UUGGCAA	AK155620|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	NM_030250|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	AK167939|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	AK167741|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	BC018372|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	BC003223|Nus1|52014|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
mm9_v1_chr5_-_68238654_68238670	0.614358	UUGGCAA	DQ503480|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AK151709|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503479|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_001038999|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_009727|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503477|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm9_v1_chr14_-_27783615_27783757	0.595252	UUGGCAA	AK030445|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK045438|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK088080|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AY113705|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK033566|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK146356|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK049307|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	NM_145221|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	BC063751|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm9_v1_chr11_+_121121273_121121393	0.595127	UUGGCAA	EU882160|Foxk2|68837|forkhead box K2	NM_001080932|Foxk2|68837|forkhead box K2	AK139325|Foxk2|68837|forkhead box K2
mm9_v1_chr7_+_104728398_104728430	0.590108	UUGGCAA	AK134242|Rsf1|233532|remodeling and spacing factor 1	NM_001081267|Rsf1|233532|remodeling and spacing factor 1	AK138087|Rsf1|233532|remodeling and spacing factor 1	AK146675|Rsf1|233532|remodeling and spacing factor 1	BC085127|Rsf1|233532|remodeling and spacing factor 1	AK146154|Rsf1|233532|remodeling and spacing factor 1	AK032853|Rsf1|233532|remodeling and spacing factor 1
mm9_v1_chr18_-_46685557_46685627	0.576855	UUGGCAA	AK129440|Fem1c|240263|fem-1 homolog c (C.elegans)	AK049336|Fem1c|240263|fem-1 homolog c (C.elegans)	AK028330|Fem1c|240263|fem-1 homolog c (C.elegans)	NM_173423|Fem1c|240263|fem-1 homolog c (C.elegans)
mm9_v1_chr6_+_54545104_54545338	0.569859	UUGGCAA	AK078040|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001164361|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK170592|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chr8_-_89409079_89409204	0.569234	UUGGCAA	AK134934|N4bp1|80750|NEDD4 binding protein 1	AK172981|N4bp1|80750|NEDD4 binding protein 1	AK147522|N4bp1|80750|NEDD4 binding protein 1	NM_030563|N4bp1|80750|NEDD4 binding protein 1
mm9_v1_chr14_+_67852128_67852128	0.566711	UUGGCAA	AK053013|Ebf2|13592|early B-cell factor 2	NM_010095|Ebf2|13592|early B-cell factor 2
mm9_v1_chr10_+_84849558_84849599	0.566469	UUGGCAA	BC096535|Btbd11|74007|BTB (POZ) domain containing 11	NM_028709|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr9_+_106073255_106073259	0.562944	UUGGCAA	AK037620|Wdr82|77305|WD repeat domain containing 82	AK035109|Wdr82|77305|WD repeat domain containing 82	AK149692|Wdr82|77305|WD repeat domain containing 82	AK159240|Wdr82|77305|WD repeat domain containing 82	AK172474|Wdr82|77305|WD repeat domain containing 82	NM_029896|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr8_+_13869640_13869740	0.556584	UUGGCAA	NM_181854|Zfp828|101994|zinc finger protein 828	AK132164|Zfp828|101994|zinc finger protein 828	AK170835|Zfp828|101994|zinc finger protein 828	AK139963|Zfp828|101994|zinc finger protein 828	AK133990|Zfp828|101994|zinc finger protein 828	BC028991|Zfp828|101994|zinc finger protein 828	AK129444|Zfp828|101994|zinc finger protein 828
mm9_v1_chr10_+_95403283_95403412	0.55357	UUGGCAA	AK042055|Eea1|216238|early endosome antigen 1	NM_001001932|Eea1|216238|early endosome antigen 1	AK082278|Eea1|216238|early endosome antigen 1	AK163235|Eea1|216238|early endosome antigen 1	BC021363|Eea1|216238|early endosome antigen 1	BC075637|Eea1|216238|early endosome antigen 1	AK046231|Eea1|216238|early endosome antigen 1	AK040844|Eea1|216238|early endosome antigen 1
mm9_v1_chr5_-_8622882_8622951	0.550032	UUGGCAA	BC058808|Rundc3b|242819|RUN domain containing 3B	NM_198620|Rundc3b|242819|RUN domain containing 3B
mm9_v1_chr8_+_124114323_124114400	0.540853	UUGGCAA	AF255953|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK132329|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC068180|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK002795|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003558|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK012604|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003106|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK003205|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	NM_026160|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	AK151614|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC028812|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC110308|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta	BC086774|Map1lc3b|67443|microtubule-associated protein 1 light chain 3 beta
mm9_v1_chr8_-_97400173_97400261	0.540258	UUGGCAA	BC004705|Dok4|114255|docking protein 4	AK032352|Dok4|114255|docking protein 4	AK077612|Dok4|114255|docking protein 4	AK156485|Dok4|114255|docking protein 4	NM_053246|Dok4|114255|docking protein 4
mm9_v1_chr2_-_6805937_6806041	0.534296	UUGGCAA	AK042749|Celf2|14007|CUGBP, Elav-like family member 2	AK164112|Celf2|14007|CUGBP, Elav-like family member 2	AK052102|Celf2|14007|CUGBP, Elav-like family member 2	AK135166|Celf2|14007|CUGBP, Elav-like family member 2	BC026856|Celf2|14007|CUGBP, Elav-like family member 2	AF090697|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110228|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160293|Celf2|14007|CUGBP, Elav-like family member 2	NM_010160|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr2_+_4073908_4073934	0.525405	UUGGCAA	NM_172475|Frmd4a|209630|FERM domain containing 4A	AK034706|Frmd4a|209630|FERM domain containing 4A	BC058672|Frmd4a|209630|FERM domain containing 4A	AK163887|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr7_+_104230260_104230335	0.523933	UUGGCAA	AF104244|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	NM_001162477|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	NM_010248|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	BC103524|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	BC103525|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	BC103526|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	BC103527|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	AB018414|Gab2|14389|growth factor receptor bound protein 2-associated protein 2
mm9_v1_chr2_+_179777187_179777250	0.517426	UUGGCAA	NM_178750|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	BC054730|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK133944|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr4_+_28740280_28740313	0.516676	UUGGCAA	AK033903|Epha7|13841|Eph receptor A7	NM_001122889|Epha7|13841|Eph receptor A7	NM_010141|Epha7|13841|Eph receptor A7	X79082|Epha7|13841|Eph receptor A7	X79083|Epha7|13841|Eph receptor A7	X79084|Epha7|13841|Eph receptor A7
mm9_v1_chr12_+_113960379_113960418	0.516645	UUGGCAA	NM_001024602|AW555464|217882|expressed sequence AW555464	AK122236|AW555464|217882|expressed sequence AW555464
mm9_v1_chrX_+_45265614_45265652	0.516353	UUGGCAA	AK047906|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK035315|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK041963|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK044320|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK138269|Ocrl|320634|oculocerebrorenal syndrome of Lowe	BC068146|Ocrl|320634|oculocerebrorenal syndrome of Lowe	NM_177215|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK028306|Ocrl|320634|oculocerebrorenal syndrome of Lowe	AK044488|Ocrl|320634|oculocerebrorenal syndrome of Lowe
mm9_v1_chr13_-_41174986_41175074	0.513093	UUGGCAA	BC050009|Mak|17152|male germ cell-associated kinase	NM_001145802|Mak|17152|male germ cell-associated kinase	NM_001145803|Mak|17152|male germ cell-associated kinase
mm9_v1_chr6_+_4853319_4853431	0.512121	UUGGCAA	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr19_+_45005608_45005655	0.507987	UUGGCAA	NM_001081225|Fam178a|226151|family with sequence similarity 178, member A	AK031688|Fam178a|226151|family with sequence similarity 178, member A	AK147588|Fam178a|226151|family with sequence similarity 178, member A	AK020064|Fam178a|226151|family with sequence similarity 178, member A	AK045983|Fam178a|226151|family with sequence similarity 178, member A
mm9_v1_chr4_-_34634507_34634712	0.506896	UUGGCAA	Z71268|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	BC012252|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	AK144170|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	NM_011895|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm9_v1_chr2_+_79547936_79548278	0.506781	UUGGCAA	AK051670|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	NM_172420|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC120706|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC132149|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK051449|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK157871|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK083940|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm9_v1_chr11_+_45869473_45869501	0.504894	UUGGCAA	NM_009616|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC093480|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chr10_+_17443024_17443226	0.487807	UUGGCAA	AK131664|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AK133791|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_010828|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	BC057126|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U86445|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	Y15163|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
mm9_v1_chr14_+_32973077_32973184	0.485229	UUGGCAA	NM_001033988|Ncoa4|27057|nuclear receptor coactivator 4	AK129020|Ncoa4|27057|nuclear receptor coactivator 4	AK145070|Ncoa4|27057|nuclear receptor coactivator 4	AK145954|Ncoa4|27057|nuclear receptor coactivator 4	AK145945|Ncoa4|27057|nuclear receptor coactivator 4	AK147125|Ncoa4|27057|nuclear receptor coactivator 4	AK146498|Ncoa4|27057|nuclear receptor coactivator 4	AK146598|Ncoa4|27057|nuclear receptor coactivator 4	BC031528|Ncoa4|27057|nuclear receptor coactivator 4	AK143965|Ncoa4|27057|nuclear receptor coactivator 4	AK146646|Ncoa4|27057|nuclear receptor coactivator 4	BC085086|Ncoa4|27057|nuclear receptor coactivator 4
mm9_v1_chr1_+_163072784_163072870	0.47744	UUGGCAA	AK016757|Ankrd45|73844|ankyrin repeat domain 45	NM_028664|Ankrd45|73844|ankyrin repeat domain 45	BC049713|Ankrd45|73844|ankyrin repeat domain 45
mm9_v1_chr1_+_74648028_74648212	0.476417	UUGGCAA	NM_175031|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	AK029842|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	BC043103|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	AK007188|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	BC049721|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)	BC058698|Stk36|269209|serine/threonine kinase 36 (fused homolog, Drosophila)
mm9_v1_chr11_-_70468130_70468151	0.475682	UUGGCAA	AK011066|Pfn1|18643|profilin 1	AK152491|Pfn1|18643|profilin 1	AK160191|Pfn1|18643|profilin 1	NM_011072|Pfn1|18643|profilin 1
mm9_v1_chr16_-_75766992_75767062	0.475168	UUGGCAA	BC039701|Hspa13|110920|heat shock protein 70 family, member 13	AK167839|Hspa13|110920|heat shock protein 70 family, member 13	BC094508|Hspa13|110920|heat shock protein 70 family, member 13	BC085181|Hspa13|110920|heat shock protein 70 family, member 13	AK049011|Hspa13|110920|heat shock protein 70 family, member 13	AK021006|Hspa13|110920|heat shock protein 70 family, member 13	AK030553|Hspa13|110920|heat shock protein 70 family, member 13	AK034643|Hspa13|110920|heat shock protein 70 family, member 13	NM_030201|Hspa13|110920|heat shock protein 70 family, member 13
mm9_v1_chr9_-_95412264_95412414	0.472108	UUGGCAA	BC031497|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene	BC080699|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene	AK011588|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene	BC059732|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene	AK011796|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene	AK029898|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene	BC068265|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene	NM_001114977|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene	NM_026476|2610101N10Rik|67958|RIKEN cDNA 2610101N10 gene
mm9_v1_chr2_-_72818502_72818502	0.470523	UUGGCAA	BC079874|Sp3|20687|trans-acting transcription factor 3	NM_001018042|Sp3|20687|trans-acting transcription factor 3
mm9_v1_chr12_+_45429857_45429887	0.469872	UUGGCAA	AK043838|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_001146031|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule	NM_176930|Nrcam|319504|neuron-glia-CAM-related cell adhesion molecule
mm9_v1_chr2_+_69627711_69627793	0.463675	UUGGCAA	BC025612|Phospho2|73373|phosphatase, orphan 2	AK159551|Phospho2|73373|phosphatase, orphan 2	AK010147|Phospho2|73373|phosphatase, orphan 2	AK006724|Phospho2|73373|phosphatase, orphan 2	NM_028521|Phospho2|73373|phosphatase, orphan 2
mm9_v1_chr1_+_33776715_33776982	0.46266	UUGGCAA	AK163909|Rab23|19335|RAB23, member RAS oncogene family	AK047068|Rab23|19335|RAB23, member RAS oncogene family	NM_008999|Rab23|19335|RAB23, member RAS oncogene family	AK164057|Rab23|19335|RAB23, member RAS oncogene family	AK054079|Rab23|19335|RAB23, member RAS oncogene family	AK082017|Rab23|19335|RAB23, member RAS oncogene family	BC025578|Rab23|19335|RAB23, member RAS oncogene family	AK045454|Rab23|19335|RAB23, member RAS oncogene family
mm9_v1_chr8_-_81923366_81923445	0.462172	UUGGCAA	BC058693|Smad1|17125|MAD homolog 1 (Drosophila)	NM_008539|Smad1|17125|MAD homolog 1 (Drosophila)	AK084505|Smad1|17125|MAD homolog 1 (Drosophila)	AK158509|Smad1|17125|MAD homolog 1 (Drosophila)
mm9_v1_chr1_-_75207318_75207363	0.46174	UUGGCAA	AK030992|Glb1l|74577|galactosidase, beta 1-like	AK029925|Glb1l|74577|galactosidase, beta 1-like	NM_029010|Glb1l|74577|galactosidase, beta 1-like
mm9_v1_chr12_-_76278318_76278318	0.456078	UUGGCAA	AK032438|Kcnh5|238271|potassium voltage-gated channel, subfamily H (eag-related), member 5	NM_172805|Kcnh5|238271|potassium voltage-gated channel, subfamily H (eag-related), member 5
mm9_v1_chr3_-_146475652_146475990	0.453369	UUGGCAA	AK193506|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK204631|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK216103|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	J02626|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	BC054533|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK048319|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_011100|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK031441|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr6_+_30351902_30351953	0.451747	UUGGCAA	AK172923|Klhdc10|76788|kelch domain containing 10	BC060132|Klhdc10|76788|kelch domain containing 10	NM_029742|Klhdc10|76788|kelch domain containing 10	AK039732|Klhdc10|76788|kelch domain containing 10	AK053834|Klhdc10|76788|kelch domain containing 10	AK085130|Klhdc10|76788|kelch domain containing 10
mm9_v1_chr4_-_154010868_154010981	0.450399	UUGGCAA	AB078338|Prdm16|70673|PR domain containing 16	AK083829|Prdm16|70673|PR domain containing 16	BC053082|Prdm16|70673|PR domain containing 16	BC059838|Prdm16|70673|PR domain containing 16	NM_001177995|Prdm16|70673|PR domain containing 16	NM_027504|Prdm16|70673|PR domain containing 16
mm9_v1_chr10_+_107599446_107599460	0.445432	UUGGCAA	AK004785|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_027892|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm9_v1_chr11_+_75546384_75546451	0.437527	UUGGCAA	NM_009536|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	BC058686|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK169812|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK075995|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr14_-_47441795_47441916	0.436596	UUGGCAA	AB001732|Gmfb|63985|glia maturation factor, beta	BC040233|Gmfb|63985|glia maturation factor, beta	AB050013|Gmfb|63985|glia maturation factor, beta	BC049134|Gmfb|63985|glia maturation factor, beta	AK013970|Gmfb|63985|glia maturation factor, beta	AK013947|Gmfb|63985|glia maturation factor, beta	AF297220|Gmfb|63985|glia maturation factor, beta	AK142014|Gmfb|63985|glia maturation factor, beta	NM_022023|Gmfb|63985|glia maturation factor, beta
mm9_v1_chr1_-_108610861_108610866	0.433806	UUGGCAA	AK049473|Bcl2|12043|B-cell leukemia/lymphoma 2	NM_009741|Bcl2|12043|B-cell leukemia/lymphoma 2	NM_177410|Bcl2|12043|B-cell leukemia/lymphoma 2
mm9_v1_chr5_+_144861227_144861325	0.433574	UUGGCAA	AK158724|Lmtk2|231876|lemur tyrosine kinase 2	NM_001081109|Lmtk2|231876|lemur tyrosine kinase 2
mm9_v1_chr1_+_141318927_141318961	0.433377	UUGGCAA	NM_172643|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog	AK036544|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog
mm9_v1_chr15_+_6658368_6658402	0.42629	UUGGCAA	AK029196|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036149|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036492|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK082586|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK087858|Rictor|78757|RPTOR independent companion of MTOR, complex 2	NM_030168|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY540053|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120903|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120904|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK019537|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK054119|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY497009|Rictor|78757|RPTOR independent companion of MTOR, complex 2
mm9_v1_chr11_-_33063024_33063083	0.423132	UUGGCAA	BC085278|Npm1|18148|nucleophosmin 1	BC092378|Npm1|18148|nucleophosmin 1	M33212|Npm1|18148|nucleophosmin 1	NM_008722|Npm1|18148|nucleophosmin 1	BC054755|Npm1|18148|nucleophosmin 1	BC090843|Npm1|18148|nucleophosmin 1	AK088923|Npm1|18148|nucleophosmin 1	AK145124|Npm1|18148|nucleophosmin 1	AK150164|Npm1|18148|nucleophosmin 1	AK153901|Npm1|18148|nucleophosmin 1	AK005498|Npm1|18148|nucleophosmin 1	AK028253|Npm1|18148|nucleophosmin 1	AK135517|Npm1|18148|nucleophosmin 1	AK145813|Npm1|18148|nucleophosmin 1	BC089546|Npm1|18148|nucleophosmin 1	AK005420|Npm1|18148|nucleophosmin 1	AK028370|Npm1|18148|nucleophosmin 1	AK165860|Npm1|18148|nucleophosmin 1	GU214027|Npm1|18148|nucleophosmin 1
mm9_v1_chr1_-_51972816_51972829	0.42203	UUGGCAA	NM_001161817|Myo1b|17912|myosin IB	NM_010863|Myo1b|17912|myosin IB
mm9_v1_chr2_+_106535757_106535757	0.417243	UUGGCAA	AK012553|Mpped2|77015|metallophosphoesterase domain containing 2	NM_029837|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr17_-_37088578_37088736	0.41571	UUGGCAA	BC027737|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK077455|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK089107|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK162607|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK170104|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	AK005379|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11	NM_029632|Ppp1r11|76497|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm9_v1_chr8_+_107749072_107749302	0.409154	UUGGCAA	AK156120|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	NM_145604|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC057919|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	AK051965|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	AK166937|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC066141|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC066826|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC006874|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene
mm9_v1_chr4_-_45421590_45421646	0.405236	UUGGCAA	AK150362|Mcart1|230125|mitochondrial carrier triple repeat 1	AK151688|Mcart1|230125|mitochondrial carrier triple repeat 1	AK152171|Mcart1|230125|mitochondrial carrier triple repeat 1	AK156168|Mcart1|230125|mitochondrial carrier triple repeat 1	AK156342|Mcart1|230125|mitochondrial carrier triple repeat 1	AK146788|Mcart1|230125|mitochondrial carrier triple repeat 1	AK020275|Mcart1|230125|mitochondrial carrier triple repeat 1	AK164726|Mcart1|230125|mitochondrial carrier triple repeat 1	AK172225|Mcart1|230125|mitochondrial carrier triple repeat 1	AK051139|Mcart1|230125|mitochondrial carrier triple repeat 1	AK165253|Mcart1|230125|mitochondrial carrier triple repeat 1	NM_001009949|Mcart1|230125|mitochondrial carrier triple repeat 1
mm9_v1_chr13_-_104124527_104124573	0.403939	UUGGCAA	AK081750|Mast4|328329|microtubule associated serine/threonine kinase family member 4	AK040801|Mast4|328329|microtubule associated serine/threonine kinase family member 4	AK044801|Mast4|328329|microtubule associated serine/threonine kinase family member 4	AK090136|Mast4|328329|microtubule associated serine/threonine kinase family member 4	AK046702|Mast4|328329|microtubule associated serine/threonine kinase family member 4	AK077719|Mast4|328329|microtubule associated serine/threonine kinase family member 4	NM_175171|Mast4|328329|microtubule associated serine/threonine kinase family member 4
mm9_v1_chr19_+_36908682_36908797	0.403821	UUGGCAA	NM_001163635|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm9_v1_chr3_-_146433200_146433208	0.403003	UUGGCAA	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chrX_+_103222548_103222685	0.39954	UUGGCAA	AK017506|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK033254|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_001109757|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_009726|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK155643|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK171563|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK172209|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U03434|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U71091|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	BC141395|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr4_-_3501912_3501958	0.398901	UUGGCAA	AK048210|Tmem68|72098|transmembrane protein 68	NM_028097|Tmem68|72098|transmembrane protein 68	BC016240|Tmem68|72098|transmembrane protein 68	AK008493|Tmem68|72098|transmembrane protein 68	AK084881|Tmem68|72098|transmembrane protein 68	AK147765|Tmem68|72098|transmembrane protein 68	AK162563|Tmem68|72098|transmembrane protein 68	AK088600|Tmem68|72098|transmembrane protein 68
mm9_v1_chrX_+_97925185_97925339	0.397594	UUGGCAA	NM_023608|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	AK031379|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	BC038274|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2	AB048364|Gdpd2|71584|glycerophosphodiester phosphodiesterase domain containing 2
mm9_v1_chr1_-_3661578_3661628	0.394687	UUGGCAA	AY534250|Xkr4|497097|X Kell blood group precursor related family member 4	NM_001011874|Xkr4|497097|X Kell blood group precursor related family member 4
mm9_v1_chr6_-_149050201_149050210	0.392558	UUGGCAA	NM_177192|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr19_-_57271875_57272120	0.389092	UUGGCAA	AF404775|Ablim1|226251|actin-binding LIM protein 1	AK143907|Ablim1|226251|actin-binding LIM protein 1	NM_001103177|Ablim1|226251|actin-binding LIM protein 1	AK122196|Ablim1|226251|actin-binding LIM protein 1
mm9_v1_chr13_-_111070392_111070417	0.383356	UUGGCAA	AK014050|Rab3c|67295|RAB3C, member RAS oncogene family	NM_023852|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chr2_+_4322020_4322021	0.383304	UUGGCAA	BC082808|Frmd4a|209630|FERM domain containing 4A	NM_001177843|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr9_-_53475610_53475616	0.382206	UUGGCAA	AK031955|Cul5|75717|cullin 5	NM_001161618|Cul5|75717|cullin 5	NM_027807|Cul5|75717|cullin 5
mm9_v1_chr8_+_48618988_48619067	0.379669	UUGGCAA	NM_203507|Rwdd4a|192174|RWD domain containing 4A	AK005797|Rwdd4a|192174|RWD domain containing 4A	AK016505|Rwdd4a|192174|RWD domain containing 4A	AK004597|Rwdd4a|192174|RWD domain containing 4A	BC016198|Rwdd4a|192174|RWD domain containing 4A
mm9_v1_chr13_-_102538106_102538184	0.376042	UUGGCAA	M60651|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	U50413|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	BC026146|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK160493|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK171366|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	NM_001077495|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr4_-_88368313_88368424	0.371065	UUGGCAA	AK129338|Klhl9|242521|kelch-like 9 (Drosophila)	BC094556|Klhl9|242521|kelch-like 9 (Drosophila)	AK049803|Klhl9|242521|kelch-like 9 (Drosophila)	AK033231|Klhl9|242521|kelch-like 9 (Drosophila)	NM_172871|Klhl9|242521|kelch-like 9 (Drosophila)
mm9_v1_chr1_+_75476106_75476188	0.365223	UUGGCAA	NM_177056|Tmem198|319998|transmembrane protein 198	BC059868|Tmem198|319998|transmembrane protein 198	AK038957|Tmem198|319998|transmembrane protein 198	AK082334|Tmem198|319998|transmembrane protein 198
mm9_v1_chr17_-_57074707_57074921	0.358279	UUGGCAA	AF312858|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	BC053005|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	NM_022328|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	AK156820|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	AK144605|Mllt1|64144|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
mm9_v1_chr5_-_141124884_141125029	0.355885	UUGGCAA	AK052340|Ttyh3|78339|tweety homolog 3 (Drosophila)	BC059083|Ttyh3|78339|tweety homolog 3 (Drosophila)	BC062917|Ttyh3|78339|tweety homolog 3 (Drosophila)	NM_175274|Ttyh3|78339|tweety homolog 3 (Drosophila)
mm9_v1_chr4_-_91066674_91066674	0.351834	UUGGCAA	BC049125|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	BC058393|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_207685|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr5_-_136410488_136410547	0.350949	UUGGCAA	NM_018871|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr11_+_17059297_17059300	0.35063	UUGGCAA	NM_024459|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm9_v1_chr13_+_51196154_51196300	0.350349	UUGGCAA	AK168544|Spin1|20729|spindlin 1	NM_146043|Spin1|20729|spindlin 1	BC016517|Spin1|20729|spindlin 1	AK134259|Spin1|20729|spindlin 1
mm9_v1_chr9_-_44575861_44575929	0.347022	UUGGCAA	BC034754|Arcn1|213827|archain 1	BC083152|Arcn1|213827|archain 1	BC017124|Arcn1|213827|archain 1	AK031385|Arcn1|213827|archain 1	BC033387|Arcn1|213827|archain 1	NM_145985|Arcn1|213827|archain 1	AK154066|Arcn1|213827|archain 1	AK028556|Arcn1|213827|archain 1	AK128973|Arcn1|213827|archain 1	BC023728|Arcn1|213827|archain 1	AK147747|Arcn1|213827|archain 1	AK047995|Arcn1|213827|archain 1
mm9_v1_chrX_-_68745773_68745833	0.345786	UUGGCAA	AK166275|Cd99l2|171486|CD99 antigen-like 2	EF516990|Cd99l2|171486|CD99 antigen-like 2	AK031264|Cd99l2|171486|CD99 antigen-like 2	AK080225|Cd99l2|171486|CD99 antigen-like 2	BC031736|Cd99l2|171486|CD99 antigen-like 2	AY078163|Cd99l2|171486|CD99 antigen-like 2	NM_138309|Cd99l2|171486|CD99 antigen-like 2	AK054364|Cd99l2|171486|CD99 antigen-like 2
mm9_v1_chr11_+_77306825_77306918	0.344923	UUGGCAA	BC079870|Git1|216963|G protein-coupled receptor kinase-interactor 1	NM_001004144|Git1|216963|G protein-coupled receptor kinase-interactor 1
mm9_v1_chr2_-_7317513_7317626	0.344373	UUGGCAA	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr16_-_97392319_97392342	0.344124	UUGGCAA	AY005483|Dscam|13508|Down syndrome cell adhesion molecule	NM_031174|Dscam|13508|Down syndrome cell adhesion molecule
mm9_v1_chr12_-_88225714_88225776	0.339703	UUGGCAA	AK155373|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK171043|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK160059|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK140441|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK082791|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AF525300|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK084782|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK173282|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	NM_145836|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK032622|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK032366|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene
mm9_v1_chr1_-_134638361_134638397	0.339365	UUGGCAA	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr15_+_68758773_68758908	0.337929	UUGGCAA	AF079763|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	AF099092|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	NM_010158|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	AK014353|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3	BC057577|Khdrbs3|13992|KH domain containing, RNA binding, signal transduction associated 3
mm9_v1_chr13_+_120217665_120217771	0.33686	UUGGCAA	NM_145457|Paip1|218693|polyadenylate binding protein-interacting protein 1	BC019726|Paip1|218693|polyadenylate binding protein-interacting protein 1	BC051042|Paip1|218693|polyadenylate binding protein-interacting protein 1
mm9_v1_chr5_-_144288812_144288864	0.336692	UUGGCAA	BC051053|Rac1|19353|RAS-related C3 botulinum substrate 1	BC003828|Rac1|19353|RAS-related C3 botulinum substrate 1	AK008435|Rac1|19353|RAS-related C3 botulinum substrate 1	AK009017|Rac1|19353|RAS-related C3 botulinum substrate 1	AK011072|Rac1|19353|RAS-related C3 botulinum substrate 1	AK034601|Rac1|19353|RAS-related C3 botulinum substrate 1	AK166383|Rac1|19353|RAS-related C3 botulinum substrate 1	NM_009007|Rac1|19353|RAS-related C3 botulinum substrate 1	AK047969|Rac1|19353|RAS-related C3 botulinum substrate 1
mm9_v1_chrX_+_100551808_100551914	0.33577	UUGGCAA	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr8_-_4325051_4325113	0.335139	UUGGCAA	AK011870|Elavl1|15568|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	AK080365|Elavl1|15568|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	AK075818|Elavl1|15568|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	AK034536|Elavl1|15568|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	NM_010485|Elavl1|15568|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)
mm9_v1_chr19_+_8816292_8816349	0.331554	UUGGCAA	AK166087|Stx5a|56389|syntaxin 5A	NM_019829|Stx5a|56389|syntaxin 5A	BC021883|Stx5a|56389|syntaxin 5A
mm9_v1_chr13_-_85428957_85429102	0.326738	UUGGCAA	NM_145452|Rasa1|218397|RAS p21 protein activator 1	AK046620|Rasa1|218397|RAS p21 protein activator 1
mm9_v1_chr11_+_29592897_29592944	0.323763	UUGGCAA	NM_194052|Rtn4|68585|reticulon 4	NM_194053|Rtn4|68585|reticulon 4	NM_194054|Rtn4|68585|reticulon 4
mm9_v1_chr4_-_109959366_109959438	0.323374	UUGGCAA	BC048159|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001163399|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_010488|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr11_-_81781897_81781910	0.323337	UUGGCAA	NM_001034013|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	AK134778|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)	AF348465|Accn1|11418|amiloride-sensitive cation channel 1, neuronal (degenerin)
mm9_v1_chr2_+_153567020_153567113	0.320484	UUGGCAA	NM_007896|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC043333|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK154245|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK013626|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	U51196|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK146206|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC052728|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC064444|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1
mm9_v1_chr5_-_38550627_38550759	0.319473	UUGGCAA	AF035683|Nsg1|18196|neuron specific gene family member 1	AK144503|Nsg1|18196|neuron specific gene family member 1	BC008272|Nsg1|18196|neuron specific gene family member 1	AK078054|Nsg1|18196|neuron specific gene family member 1	AK148941|Nsg1|18196|neuron specific gene family member 1	AX775765|Nsg1|18196|neuron specific gene family member 1	NM_010942|Nsg1|18196|neuron specific gene family member 1
mm9_v1_chr14_-_76154241_76154387	0.315669	UUGGCAA	AK140362|Cog3|338337|component of oligomeric golgi complex 3	NM_177381|Cog3|338337|component of oligomeric golgi complex 3	BC038030|Cog3|338337|component of oligomeric golgi complex 3
mm9_v1_chr18_+_37098858_37098971	0.312307	UUGGCAA	BC030897|Pcdha2|353234|protocadherin alpha 2	NM_198117|Pcdha2|353234|protocadherin alpha 2	BC141390|Pcdha2|353234|protocadherin alpha 2	AY013760|Pcdha2|353234|protocadherin alpha 2
mm9_v1_chr6_-_13627853_13628000	0.311605	UUGGCAA	BC145708|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	BC145710|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK170526|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK046745|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	NM_175312|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene
mm9_v1_chr11_+_5420920_5421028	0.309095	UUGGCAA	AF027963|Xbp1|22433|X-box binding protein 1	NM_013842|Xbp1|22433|X-box binding protein 1	AK007724|Xbp1|22433|X-box binding protein 1	AK145241|Xbp1|22433|X-box binding protein 1	BC029197|Xbp1|22433|X-box binding protein 1	BC008153|Xbp1|22433|X-box binding protein 1
mm9_v1_chr9_-_99336923_99337150	0.307573	UUGGCAA	AK050469|Mras|17532|muscle and microspikes RAS	AB004879|Mras|17532|muscle and microspikes RAS	NM_008624|Mras|17532|muscle and microspikes RAS
mm9_v1_chr2_+_28980511_28980658	0.306264	UUGGCAA	AK044730|Setx|269254|senataxin	NM_198033|Setx|269254|senataxin
mm9_v1_chr7_-_36539369_36539472	0.305537	UUGGCAA	BC059897|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK045758|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK031722|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	BC050065|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK033395|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AF538322|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK031345|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	AK034217|Dpy19l3|233115|dpy-19-like 3 (C. elegans)	NM_178704|Dpy19l3|233115|dpy-19-like 3 (C. elegans)
mm9_v1_chr12_+_82960953_82961016	0.305133	UUGGCAA	NM_018814|Pcnx|54604|pecanex homolog (Drosophila)
mm9_v1_chr18_+_37127284_37127409	0.300928	UUGGCAA	D86917|Pcdha6|12937|protocadherin alpha 6	BC150815|Pcdha6|12937|protocadherin alpha 6	BC150816|Pcdha6|12937|protocadherin alpha 6	BC054813|Pcdha6|12937|protocadherin alpha 6	AY013764|Pcdha6|12937|protocadherin alpha 6	NM_007767|Pcdha6|12937|protocadherin alpha 6
mm9_v1_chr3_-_107949028_107949092	0.298946	UUGGCAA	AK077490|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	NM_010306|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	BC020009|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK169285|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK004566|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm9_v1_chr6_-_94233855_94233910	0.298555	UUGGCAA	AK046635|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC095943|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001029850|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_010367|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK147358|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr11_+_77499638_77499656	0.295356	UUGGCAA	AK030113|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK160601|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	NM_001024205|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK170764|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK122494|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2
mm9_v1_chr13_+_120217406_120217406	0.295344	UUGGCAA	AK040012|Paip1|218693|polyadenylate binding protein-interacting protein 1	NM_001079849|Paip1|218693|polyadenylate binding protein-interacting protein 1
mm9_v1_chr12_-_113146259_113146309	0.295135	UUGGCAA	BC054788|Ppp1r13b|21981|protein phosphatase 1, regulatory (inhibitor) subunit 13B	NM_011625|Ppp1r13b|21981|protein phosphatase 1, regulatory (inhibitor) subunit 13B	BC053092|Ppp1r13b|21981|protein phosphatase 1, regulatory (inhibitor) subunit 13B	AK148849|Ppp1r13b|21981|protein phosphatase 1, regulatory (inhibitor) subunit 13B
mm9_v1_chr15_-_97662101_97662197	0.291649	UUGGCAA	BC057332|Hdac7|56233|histone deacetylase 7	NM_019572|Hdac7|56233|histone deacetylase 7	AY943912|Hdac7|56233|histone deacetylase 7
mm9_v1_chr9_+_50583388_50583453	0.289228	UUGGCAA	AK086674|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK050335|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK149592|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK054293|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	BC021791|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	NM_133981|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)
mm9_v1_chr10_+_17516024_17516131	0.284742	UUGGCAA	AK084639|Txlnb|378431|taxilin beta	NM_138628|Txlnb|378431|taxilin beta	AK084579|Txlnb|378431|taxilin beta	AK052324|Txlnb|378431|taxilin beta	AF422244|Txlnb|378431|taxilin beta	AF422245|Txlnb|378431|taxilin beta	AK137442|Txlnb|378431|taxilin beta	BC141023|Txlnb|378431|taxilin beta	AK085904|Txlnb|378431|taxilin beta
mm9_v1_chr13_+_12658130_12658343	0.283921	UUGGCAA	AK160664|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC058721|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	NM_026184|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	AK004981|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	AK041951|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC111900|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC112426|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC145888|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC145890|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	AF489856|Ero1lb|67475|ERO1-like beta (S. cerevisiae)
mm9_v1_chr17_-_80879792_80879792	0.280861	UUGGCAA	AK140310|Sos1|20662|son of sevenless homolog 1 (Drosophila)	NM_009231|Sos1|20662|son of sevenless homolog 1 (Drosophila)
mm9_v1_chr4_+_9196439_9196508	0.280104	UUGGCAA	AK034888|Clvs1|74438|clavesin 1	AK083985|Clvs1|74438|clavesin 1	AK047462|Clvs1|74438|clavesin 1	AK083810|Clvs1|74438|clavesin 1	NM_028940|Clvs1|74438|clavesin 1	AK084350|Clvs1|74438|clavesin 1	AK043072|Clvs1|74438|clavesin 1	AK032549|Clvs1|74438|clavesin 1	BC062923|Clvs1|74438|clavesin 1
mm9_v1_chrX_-_67618235_67618286	0.278593	UUGGCAA	AK132287|Ids|15931|iduronate 2-sulfatase	AK085237|Ids|15931|iduronate 2-sulfatase	AF538870|Ids|15931|iduronate 2-sulfatase	NM_010498|Ids|15931|iduronate 2-sulfatase
mm9_v1_chr12_-_86311718_86311851	0.278161	UUGGCAA	BC057351|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	BC079590|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK147878|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK154529|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK147491|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	NM_178065|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene
mm9_v1_chr9_+_54997159_54997206	0.276489	UUGGCAA	AK042515|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	NM_180600|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	AK083216|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2
mm9_v1_chrX_-_159081510_159081550	0.275361	UUGGCAA	AY263368|Reps2|194590|RALBP1 associated Eps domain containing protein 2	NM_178256|Reps2|194590|RALBP1 associated Eps domain containing protein 2
mm9_v1_chr8_+_126755253_126755502	0.273888	UUGGCAA	NM_139272|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK046567|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	BC059818|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK149609|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK145122|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AF348968|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK151536|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm9_v1_chr18_+_37133455_37133703	0.273073	UUGGCAA	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chr12_+_81745188_81745226	0.271142	UUGGCAA	NM_026244|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK090062|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK080462|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	BC072655|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK008025|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr11_+_103635438_103635563	0.267309	UUGGCAA	AK132516|Wnt3|22415|wingless-related MMTV integration site 3	NM_009521|Wnt3|22415|wingless-related MMTV integration site 3	M32502|Wnt3|22415|wingless-related MMTV integration site 3	BC152305|Wnt3|22415|wingless-related MMTV integration site 3	BC152537|Wnt3|22415|wingless-related MMTV integration site 3	BC152304|Wnt3|22415|wingless-related MMTV integration site 3	AK141154|Wnt3|22415|wingless-related MMTV integration site 3	BC141271|Wnt3|22415|wingless-related MMTV integration site 3	BC141274|Wnt3|22415|wingless-related MMTV integration site 3
mm9_v1_chrX_-_34185389_34185408	0.267162	UUGGCAA	AK046007|Akap17b|338351|A kinase (PRKA) anchor protein 17B	AK054091|Akap17b|338351|A kinase (PRKA) anchor protein 17B	NM_001081956|Akap17b|338351|A kinase (PRKA) anchor protein 17B
mm9_v1_chr9_-_73781373_73781373	0.26641	UUGGCAA	NM_001081153|Unc13c|208898|unc-13 homolog C (C. elegans)
mm9_v1_chr14_-_41780085_41780217	0.266241	UUGGCAA	BC026574|Tspan14|52588|tetraspanin 14	NM_145928|Tspan14|52588|tetraspanin 14	AK030593|Tspan14|52588|tetraspanin 14	BC025568|Tspan14|52588|tetraspanin 14	BC024611|Tspan14|52588|tetraspanin 14
mm9_v1_chr9_+_111174321_111174442	0.262689	UUGGCAA	BC018474|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	NM_175266|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK032284|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK043518|Epm2aip1|77781|EPM2A (laforin) interacting protein 1	AK030084|Epm2aip1|77781|EPM2A (laforin) interacting protein 1
mm9_v1_chr3_+_121129396_121129492	0.262433	UUGGCAA	AK169098|Cnn3|71994|calponin 3, acidic	AK159555|Cnn3|71994|calponin 3, acidic	AK169021|Cnn3|71994|calponin 3, acidic	AK167201|Cnn3|71994|calponin 3, acidic	AK051628|Cnn3|71994|calponin 3, acidic	AK159871|Cnn3|71994|calponin 3, acidic	AK167613|Cnn3|71994|calponin 3, acidic	AK166578|Cnn3|71994|calponin 3, acidic	BC055711|Cnn3|71994|calponin 3, acidic	AK005460|Cnn3|71994|calponin 3, acidic	NM_028044|Cnn3|71994|calponin 3, acidic	AK051121|Cnn3|71994|calponin 3, acidic	AK169410|Cnn3|71994|calponin 3, acidic
mm9_v1_chr1_+_145487825_145487990	0.255135	UUGGCAA	AK036141|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_020025|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK034371|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK083168|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK080106|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC046322|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm9_v1_chr14_+_15535538_15535592	0.254371	UUGGCAA	AK152233|Slc4a7|218756|solute carrier family 4, sodium bicarbonate cotransporter, member 7	AK153567|Slc4a7|218756|solute carrier family 4, sodium bicarbonate cotransporter, member 7	NM_001033270|Slc4a7|218756|solute carrier family 4, sodium bicarbonate cotransporter, member 7	AK088400|Slc4a7|218756|solute carrier family 4, sodium bicarbonate cotransporter, member 7	GU386352|Slc4a7|218756|solute carrier family 4, sodium bicarbonate cotransporter, member 7	GU386353|Slc4a7|218756|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm9_v1_chr4_+_41082993_41083094	0.253935	UUGGCAA	AK003550|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	AK075703|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	BC011112|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	AK075714|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	NM_026275|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	AJ240086|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2
mm9_v1_chr9_-_50535949_50536088	0.253869	UUGGCAA	AY549884|Dixdc1|330938|DIX domain containing 1	AK016205|Dixdc1|330938|DIX domain containing 1	BC048182|Dixdc1|330938|DIX domain containing 1	BC063085|Dixdc1|330938|DIX domain containing 1	AK164424|Dixdc1|330938|DIX domain containing 1	NM_178118|Dixdc1|330938|DIX domain containing 1
mm9_v1_chr9_+_107904919_107905018	0.250278	UUGGCAA	AK172921|Ip6k1|27399|inositol hexaphosphate kinase 1	AK037925|Ip6k1|27399|inositol hexaphosphate kinase 1	AK088872|Ip6k1|27399|inositol hexaphosphate kinase 1	BC053030|Ip6k1|27399|inositol hexaphosphate kinase 1	AK171310|Ip6k1|27399|inositol hexaphosphate kinase 1	AK166143|Ip6k1|27399|inositol hexaphosphate kinase 1	BC059006|Ip6k1|27399|inositol hexaphosphate kinase 1	NM_013785|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr2_+_22477837_22477846	0.245907	UUGGCAA	D42051|Gad2|14417|glutamic acid decarboxylase 2	NM_008078|Gad2|14417|glutamic acid decarboxylase 2
mm9_v1_chr5_+_29895742_29895846	0.244894	UUGGCAA	AK046056|Ube3c|100763|ubiquitin protein ligase E3C	NM_133907|Ube3c|100763|ubiquitin protein ligase E3C	AK122187|Ube3c|100763|ubiquitin protein ligase E3C
mm9_v1_chr12_+_56937309_56937356	0.242994	UUGGCAA	AK154678|Brms1l|52592|breast cancer metastasis-suppressor 1-like	AK155742|Brms1l|52592|breast cancer metastasis-suppressor 1-like	NM_001037756|Brms1l|52592|breast cancer metastasis-suppressor 1-like
mm9_v1_chr9_-_20954341_20954417	0.242201	UUGGCAA	AK013255|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	NM_016742|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	AK168651|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	BC060079|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	AK010494|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	AK145671|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	U43076|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)
mm9_v1_chr17_+_34729396_34729495	0.240784	UUGGCAA	AF020198|Pbx2|18515|pre B-cell leukemia transcription factor 2	NM_017463|Pbx2|18515|pre B-cell leukemia transcription factor 2	BC087615|Pbx2|18515|pre B-cell leukemia transcription factor 2	AK134357|Pbx2|18515|pre B-cell leukemia transcription factor 2
mm9_v1_chr3_+_34548916_34548976	0.237852	UUGGCAA	NM_011443|Sox2|20674|SRY-box containing gene 2	U31967|Sox2|20674|SRY-box containing gene 2
mm9_v1_chr3_+_63780058_63780135	0.235741	UUGGCAA	AK143197|Gmps|229363|guanine monophosphate synthetase	NM_001033300|Gmps|229363|guanine monophosphate synthetase	AK169701|Gmps|229363|guanine monophosphate synthetase	AK169043|Gmps|229363|guanine monophosphate synthetase	AK167857|Gmps|229363|guanine monophosphate synthetase	AK049755|Gmps|229363|guanine monophosphate synthetase	BC138411|Gmps|229363|guanine monophosphate synthetase	BC138412|Gmps|229363|guanine monophosphate synthetase	AK168239|Gmps|229363|guanine monophosphate synthetase
mm9_v1_chr14_+_28435613_28435695	0.228766	UUGGCAA	AK147213|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2	BC056760|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2	NM_177814|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2	AK032385|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2
mm9_v1_chrX_-_13423666_13423727	0.228486	UUGGCAA	NM_009806|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17137|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17138|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm9_v1_chr19_-_32462926_32462979	0.227616	UUGGCAA	AK151170|Sgms1|208449|sphingomyelin synthase 1	AK153406|Sgms1|208449|sphingomyelin synthase 1	AK146782|Sgms1|208449|sphingomyelin synthase 1	AY509044|Sgms1|208449|sphingomyelin synthase 1	NM_144792|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr9_+_75862772_75862821	0.22681	UUGGCAA	BC037381|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	NM_173731|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK141622|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK164164|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm9_v1_chr2_-_120676125_120676339	0.223256	UUGGCAA	AK046978|Ttbk2|140810|tau tubulin kinase 2	AK053820|Ttbk2|140810|tau tubulin kinase 2	AK137024|Ttbk2|140810|tau tubulin kinase 2	AK148269|Ttbk2|140810|tau tubulin kinase 2	NM_001024856|Ttbk2|140810|tau tubulin kinase 2	NM_001024857|Ttbk2|140810|tau tubulin kinase 2	NM_080788|Ttbk2|140810|tau tubulin kinase 2	AK077011|Ttbk2|140810|tau tubulin kinase 2
mm9_v1_chr2_+_127073631_127073743	0.222675	UUGGCAA	AK165880|Tmem127|69470|transmembrane protein 127	AK030324|Tmem127|69470|transmembrane protein 127	BC049832|Tmem127|69470|transmembrane protein 127	NM_175145|Tmem127|69470|transmembrane protein 127	AK050216|Tmem127|69470|transmembrane protein 127
mm9_v1_chr14_+_21167383_21167391	0.219509	UUGGCAA	AK031973|Fam149b|105428|family with sequence similarity 149, member B	NM_001177633|Fam149b|105428|family with sequence similarity 149, member B	NM_172379|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chr10_+_85061155_85061265	0.218995	UUGGCAA	NM_001017525|Btbd11|74007|BTB (POZ) domain containing 11	AK044022|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr2_+_117937623_117937666	0.217035	UUGGCAA	AK080686|Thbs1|21825|thrombospondin 1	AK145202|Thbs1|21825|thrombospondin 1	AK163092|Thbs1|21825|thrombospondin 1	M87276|Thbs1|21825|thrombospondin 1	BC050917|Thbs1|21825|thrombospondin 1	NM_011580|Thbs1|21825|thrombospondin 1	BC020435|Thbs1|21825|thrombospondin 1	BC042422|Thbs1|21825|thrombospondin 1
mm9_v1_chr11_+_83286587_83286623	0.214273	UUGGCAA	AK011843|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK078205|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK051568|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_027427|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK166550|Taf15|70439|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr15_-_102076706_102076930	0.213832	UUGGCAA	M34475|Rarg|19411|retinoic acid receptor, gamma	AK155911|Rarg|19411|retinoic acid receptor, gamma	NM_001042727|Rarg|19411|retinoic acid receptor, gamma	M32069|Rarg|19411|retinoic acid receptor, gamma
mm9_v1_chr2_+_83484686_83484734	0.21323	UUGGCAA	AK050782|Zc3h15|69082|zinc finger CCCH-type containing 15	BC031845|Zc3h15|69082|zinc finger CCCH-type containing 15	NM_026934|Zc3h15|69082|zinc finger CCCH-type containing 15
mm9_v1_chr13_-_34437042_34437162	0.211771	UUGGCAA	AK147397|Slc22a23|73102|solute carrier family 22, member 23	NM_001033167|Slc22a23|73102|solute carrier family 22, member 23
mm9_v1_chr7_-_146101096_146101214	0.209179	UUGGCAA	BC033278|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AF041054|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AK170865|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	BC046603|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AK152610|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AK014223|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AK075943|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	NM_009760|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3
mm9_v1_chr12_+_85291557_85291603	0.208126	UUGGCAA	BC138094|2410016O06Rik|71952|RIKEN cDNA 2410016O06 gene	NM_023633|2410016O06Rik|71952|RIKEN cDNA 2410016O06 gene
mm9_v1_chr5_-_3803095_3803144	0.205214	UUGGCAA	NM_001003909|Ankib1|70797|ankyrin repeat and IBR domain containing 1	AK014523|Ankib1|70797|ankyrin repeat and IBR domain containing 1
mm9_v1_chr11_+_77908168_77908192	0.204439	UUGGCAA	AK085728|BC017647|216971|cDNA sequence BC017647	NM_145430|BC017647|216971|cDNA sequence BC017647	AK047860|BC017647|216971|cDNA sequence BC017647	AK140562|BC017647|216971|cDNA sequence BC017647
mm9_v1_chr6_+_42214999_42215177	0.204373	UUGGCAA	NM_007610|Casp2|12366|caspase 2	Y13085|Casp2|12366|caspase 2	BC034262|Casp2|12366|caspase 2	AK170649|Casp2|12366|caspase 2	AK052396|Casp2|12366|caspase 2	AK133829|Casp2|12366|caspase 2	AK042072|Casp2|12366|caspase 2	D28492|Casp2|12366|caspase 2	AK199368|Casp2|12366|caspase 2	AK210521|Casp2|12366|caspase 2
mm9_v1_chrX_-_133403050_133403118	0.200225	UUGGCAA	BC107383|Rab9b|319642|RAB9B, member RAS oncogene family	AK034442|Rab9b|319642|RAB9B, member RAS oncogene family	NM_176971|Rab9b|319642|RAB9B, member RAS oncogene family	AK049693|Rab9b|319642|RAB9B, member RAS oncogene family
mm9_v1_chr8_+_109674517_109674597	0.198634	UUGGCAA	BC054749|Cyb5b|66427|cytochrome b5 type B	BC062980|Cyb5b|66427|cytochrome b5 type B	AK003333|Cyb5b|66427|cytochrome b5 type B	AK088970|Cyb5b|66427|cytochrome b5 type B	AK165543|Cyb5b|66427|cytochrome b5 type B	AK052810|Cyb5b|66427|cytochrome b5 type B	NM_025558|Cyb5b|66427|cytochrome b5 type B	AK019263|Cyb5b|66427|cytochrome b5 type B	BC048147|Cyb5b|66427|cytochrome b5 type B	AK003815|Cyb5b|66427|cytochrome b5 type B	AK168422|Cyb5b|66427|cytochrome b5 type B	AK166544|Cyb5b|66427|cytochrome b5 type B	BC046810|Cyb5b|66427|cytochrome b5 type B	BC046479|Cyb5b|66427|cytochrome b5 type B	BC058812|Cyb5b|66427|cytochrome b5 type B
mm9_v1_chr7_+_80520360_80520429	0.195011	UUGGCAA	AK082560|Rgma|244058|RGM domain family, member A	BC059072|Rgma|244058|RGM domain family, member A	NM_177740|Rgma|244058|RGM domain family, member A
mm9_v1_chr12_+_45370113_45370142	0.187024	UUGGCAA	NM_026164|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr3_-_19062922_19063101	0.18566	UUGGCAA	AK208595|Armc1|74252|armadillo repeat containing 1	AK213606|Armc1|74252|armadillo repeat containing 1	AK144184|Armc1|74252|armadillo repeat containing 1	AK079299|Armc1|74252|armadillo repeat containing 1	AK167233|Armc1|74252|armadillo repeat containing 1	BC051067|Armc1|74252|armadillo repeat containing 1	BC021451|Armc1|74252|armadillo repeat containing 1	NM_028840|Armc1|74252|armadillo repeat containing 1	AK009402|Armc1|74252|armadillo repeat containing 1	AK082783|Armc1|74252|armadillo repeat containing 1	AK145993|Armc1|74252|armadillo repeat containing 1
mm9_v1_chr7_+_129210684_129210770	0.185011	UUGGCAA	AK077395|Ubfd1|28018|ubiquitin family domain containing 1	NM_138589|Ubfd1|28018|ubiquitin family domain containing 1	BC011313|Ubfd1|28018|ubiquitin family domain containing 1	AK033428|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr16_+_32877857_32877985	0.184949	UUGGCAA	NM_001159349|Fyttd1|69823|forty-two-three domain containing 1	NM_027226|Fyttd1|69823|forty-two-three domain containing 1	AK139638|Fyttd1|69823|forty-two-three domain containing 1	AK161252|Fyttd1|69823|forty-two-three domain containing 1	AK008130|Fyttd1|69823|forty-two-three domain containing 1	AK050479|Fyttd1|69823|forty-two-three domain containing 1	AK157602|Fyttd1|69823|forty-two-three domain containing 1	AK166032|Fyttd1|69823|forty-two-three domain containing 1	AK170511|Fyttd1|69823|forty-two-three domain containing 1	AK014447|Fyttd1|69823|forty-two-three domain containing 1	BC010204|Fyttd1|69823|forty-two-three domain containing 1	AK050448|Fyttd1|69823|forty-two-three domain containing 1	AK165633|Fyttd1|69823|forty-two-three domain containing 1	BC028253|Fyttd1|69823|forty-two-three domain containing 1	AK029785|Fyttd1|69823|forty-two-three domain containing 1	AJ344096|Fyttd1|69823|forty-two-three domain containing 1
mm9_v1_chr18_+_37105758_37105860	0.18197	UUGGCAA	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chrX_+_82819294_82819360	0.181619	UUGGCAA	AK220185|Tab3|66724|TGF-beta activated kinase 1/MAP3K7 binding protein 3	NM_025729|Tab3|66724|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm9_v1_chr11_-_98054597_98054606	0.180915	UUGGCAA	AK049203|Med1|19014|mediator complex subunit 1	AK054437|Med1|19014|mediator complex subunit 1	NM_001080118|Med1|19014|mediator complex subunit 1	NM_134027|Med1|19014|mediator complex subunit 1
mm9_v1_chrX_-_20527674_20527737	0.180558	UUGGCAA	BC054474|Elk1|13712|ELK1, member of ETS oncogene family	AK132354|Elk1|13712|ELK1, member of ETS oncogene family	NM_007922|Elk1|13712|ELK1, member of ETS oncogene family	AK082260|Elk1|13712|ELK1, member of ETS oncogene family
mm9_v1_chr8_+_109817355_109817761	0.178017	UUGGCAA	AK045123|Nfat5|54446|nuclear factor of activated T-cells 5	AK134022|Nfat5|54446|nuclear factor of activated T-cells 5	NM_018823|Nfat5|54446|nuclear factor of activated T-cells 5	NM_133957|Nfat5|54446|nuclear factor of activated T-cells 5	AK052632|Nfat5|54446|nuclear factor of activated T-cells 5	AF162853|Nfat5|54446|nuclear factor of activated T-cells 5	AK172011|Nfat5|54446|nuclear factor of activated T-cells 5	AF369980|Nfat5|54446|nuclear factor of activated T-cells 5	AF453571|Nfat5|54446|nuclear factor of activated T-cells 5
mm9_v1_chr16_-_96303958_96304070	0.17787	UUGGCAA	BC095940|Brwd1|93871|bromodomain and WD repeat domain containing 1	BC145265|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292467|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292468|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK030493|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_001103179|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_145125|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_176928|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK051870|Brwd1|93871|bromodomain and WD repeat domain containing 1
mm9_v1_chr7_+_19511230_19511244	0.175948	UUGGCAA	NM_001029877|Nova2|384569|neuro-oncological ventral antigen 2
mm9_v1_chr9_+_107436275_107436351	0.174197	UUGGCAA	AF134238|Tmem115|56395|transmembrane protein 115	NM_019704|Tmem115|56395|transmembrane protein 115	AK043834|Tmem115|56395|transmembrane protein 115	AK154202|Tmem115|56395|transmembrane protein 115
mm9_v1_chr7_-_144506112_144506127	0.173552	UUGGCAA	AK220542|Ebf3|13593|early B-cell factor 3	NM_001113414|Ebf3|13593|early B-cell factor 3	NM_001113415|Ebf3|13593|early B-cell factor 3	NM_010096|Ebf3|13593|early B-cell factor 3
mm9_v1_chr5_+_34338625_34338665	0.171335	UUGGCAA	AK147307|Nat8l|269642|N-acetyltransferase 8-like	NM_001001985|Nat8l|269642|N-acetyltransferase 8-like
mm9_v1_chr11_-_80593259_80593526	0.171331	UUGGCAA	AK188302|Myo1d|338367|myosin ID	AK203977|Myo1d|338367|myosin ID	BC150765|Myo1d|338367|myosin ID	AK037051|Myo1d|338367|myosin ID	AK049374|Myo1d|338367|myosin ID	NM_177390|Myo1d|338367|myosin ID
mm9_v1_chr17_-_31992708_31992780	0.170798	UUGGCAA	U11494|Sik1|17691|salt inducible kinase 1	AK141817|Sik1|17691|salt inducible kinase 1	NM_010831|Sik1|17691|salt inducible kinase 1	AK172427|Sik1|17691|salt inducible kinase 1
mm9_v1_chr6_-_124779408_124779497	0.169804	UUGGCAA	AK186740|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)	BC066993|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)	AK154008|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)	NM_013700|Usp5|22225|ubiquitin specific peptidase 5 (isopeptidase T)
mm9_v1_chr6_-_124364880_124365084	0.168558	UUGGCAA	AK088886|Pex5|19305|peroxisomal biogenesis factor 5	AK145361|Pex5|19305|peroxisomal biogenesis factor 5	BC029748|Pex5|19305|peroxisomal biogenesis factor 5	AK145111|Pex5|19305|peroxisomal biogenesis factor 5	AJ416473|Pex5|19305|peroxisomal biogenesis factor 5	AK161470|Pex5|19305|peroxisomal biogenesis factor 5	NM_008995|Pex5|19305|peroxisomal biogenesis factor 5	NM_175933|Pex5|19305|peroxisomal biogenesis factor 5
mm9_v1_chrX_-_39265047_39265129	0.16807	UUGGCAA	AK140950|Thoc2|331401|THO complex 2	AK138023|Thoc2|331401|THO complex 2	NM_001033422|Thoc2|331401|THO complex 2	AK137966|Thoc2|331401|THO complex 2
mm9_v1_chr16_+_3908975_3909105	0.167397	UUGGCAA	BC024910|Cluap1|76779|clusterin associated protein 1	NM_029738|Cluap1|76779|clusterin associated protein 1	AK009540|Cluap1|76779|clusterin associated protein 1	AK134648|Cluap1|76779|clusterin associated protein 1	AK166050|Cluap1|76779|clusterin associated protein 1	AK011846|Cluap1|76779|clusterin associated protein 1
mm9_v1_chr2_-_104656852_104656885	0.166465	UUGGCAA	NM_001123327|Qser1|99003|glutamine and serine rich 1
mm9_v1_chr5_+_73882264_73882364	0.16382	UUGGCAA	NM_001190733|Dcun1d4|100737|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_178896|Dcun1d4|100737|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK033559|Dcun1d4|100737|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC137627|Dcun1d4|100737|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC137628|Dcun1d4|100737|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC144794|Dcun1d4|100737|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC060213|Dcun1d4|100737|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC108346|Dcun1d4|100737|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm9_v1_chr4_+_12833983_12834027	0.161245	UUGGCAA	DQ351292|Gm11818|208820|predicted gene 11818	NM_001171801|Gm11818|208820|predicted gene 11818	NM_173746|Gm11818|208820|predicted gene 11818	AK048604|Gm11818|208820|predicted gene 11818
mm9_v1_chr2_-_171868868_171868965	0.160976	UUGGCAA	BC094540|Cbln4|228942|cerebellin 4 precursor protein	AK032621|Cbln4|228942|cerebellin 4 precursor protein	NM_175631|Cbln4|228942|cerebellin 4 precursor protein
mm9_v1_chr11_+_110927475_110927548	0.160211	UUGGCAA	AK044915|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	NM_008425|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	X73052|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2
mm9_v1_chr15_+_25772997_25773018	0.157446	UUGGCAA	NM_001034851|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chr15_-_37722161_37722182	0.157229	UUGGCAA	AK048440|Ncald|52589|neurocalcin delta	NM_134094|Ncald|52589|neurocalcin delta
mm9_v1_chr4_+_45354940_45354977	0.156218	UUGGCAA	AK170534|Dcaf10|242418|DDB1 and CUL4 associated factor 10	AK165246|Dcaf10|242418|DDB1 and CUL4 associated factor 10	NM_153167|Dcaf10|242418|DDB1 and CUL4 associated factor 10
mm9_v1_chr2_+_28368603_28368686	0.156194	UUGGCAA	NM_001145834|Ralgds|19730|ral guanine nucleotide dissociation stimulator	NM_009058|Ralgds|19730|ral guanine nucleotide dissociation stimulator
mm9_v1_chr7_-_135883942_135884024	0.155516	UUGGCAA	BC038342|Mcmbp|210711|MCM (minichromosome maintenance deficient) binding protein	NM_145955|Mcmbp|210711|MCM (minichromosome maintenance deficient) binding protein	BC025641|Mcmbp|210711|MCM (minichromosome maintenance deficient) binding protein	AK083385|Mcmbp|210711|MCM (minichromosome maintenance deficient) binding protein
mm9_v1_chr8_-_125736641_125736711	0.155483	UUGGCAA	BC023807|Chmp1a|234852|chromatin modifying protein 1A	BC036152|Chmp1a|234852|chromatin modifying protein 1A	AK046416|Chmp1a|234852|chromatin modifying protein 1A	AK159830|Chmp1a|234852|chromatin modifying protein 1A	NM_145606|Chmp1a|234852|chromatin modifying protein 1A
mm9_v1_chr12_+_4599810_4599868	0.152711	UUGGCAA	AK034367|Itsn2|20403|intersectin 2	NM_001198968|Itsn2|20403|intersectin 2	NM_001198969|Itsn2|20403|intersectin 2	NM_011365|Itsn2|20403|intersectin 2	BC138262|Itsn2|20403|intersectin 2	BC171950|Itsn2|20403|intersectin 2	AK163807|Itsn2|20403|intersectin 2	AK042449|Itsn2|20403|intersectin 2	AK029325|Itsn2|20403|intersectin 2
mm9_v1_chr2_+_109532592_109532697	0.152066	UUGGCAA	AY057913|Bdnf|12064|brain derived neurotrophic factor	EF125673|Bdnf|12064|brain derived neurotrophic factor	NM_001048141|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr11_-_87172419_87172533	0.151738	UUGGCAA	AK053696|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138900|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138903|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	NM_177167|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chr1_-_137481914_137481937	0.150918	UUGGCAA	NM_173437|Nav1|215690|neuron navigator 1
mm9_v1_chr13_+_38129095_38129163	0.150797	UUGGCAA	AK152707|Riok1|71340|RIO kinase 1 (yeast)	BC006884|Riok1|71340|RIO kinase 1 (yeast)	AK017312|Riok1|71340|RIO kinase 1 (yeast)	NM_024242|Riok1|71340|RIO kinase 1 (yeast)
mm9_v1_chr11_+_117127516_117127564	0.149962	UUGGCAA	NM_001113487|Sept9|53860|septin 9
mm9_v1_chr16_+_13256573_13256634	0.144422	UUGGCAA	NM_001122667|Mkl2|239719|MKL/myocardin-like 2	X66901|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr19_-_32285445_32285502	0.144242	UUGGCAA	AK079254|Sgms1|208449|sphingomyelin synthase 1	AK133967|Sgms1|208449|sphingomyelin synthase 1	BC019443|Sgms1|208449|sphingomyelin synthase 1	AK150272|Sgms1|208449|sphingomyelin synthase 1	AK152312|Sgms1|208449|sphingomyelin synthase 1	AK160539|Sgms1|208449|sphingomyelin synthase 1	NM_001168526|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr3_+_88140181_88140184	0.143712	UUGGCAA	AK143911|Smg5|229512|Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_178246|Smg5|229512|Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr9_-_110379093_110379197	0.141057	UUGGCAA	BC065167|Klhl18|270201|kelch-like 18 (Drosophila)	BC025563|Klhl18|270201|kelch-like 18 (Drosophila)	AK173029|Klhl18|270201|kelch-like 18 (Drosophila)	NM_177771|Klhl18|270201|kelch-like 18 (Drosophila)
mm9_v1_chr11_+_44332426_44332513	0.140082	UUGGCAA	AK014408|Rnf145|74315|ring finger protein 145	NM_028862|Rnf145|74315|ring finger protein 145	AK043002|Rnf145|74315|ring finger protein 145
mm9_v1_chr3_-_103613294_103613330	0.13904	UUGGCAA	AK084347|Dclre1b|140917|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)	AK049115|Dclre1b|140917|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)	NM_001025312|Dclre1b|140917|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)	NM_133865|Dclre1b|140917|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)	AK046571|Dclre1b|140917|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)
mm9_v1_chr16_+_33251485_33251551	0.135507	UUGGCAA	AK007706|Snx4|69150|sorting nexin 4	AK030657|Snx4|69150|sorting nexin 4	AK031368|Snx4|69150|sorting nexin 4	AK135356|Snx4|69150|sorting nexin 4	BC016599|Snx4|69150|sorting nexin 4	NM_080557|Snx4|69150|sorting nexin 4	BC006043|Snx4|69150|sorting nexin 4
mm9_v1_chr3_-_142544883_142544984	0.135317	UUGGCAA	AK046248|Pkn2|109333|protein kinase N2	AK171092|Pkn2|109333|protein kinase N2	BC052073|Pkn2|109333|protein kinase N2	AK077910|Pkn2|109333|protein kinase N2	AK028469|Pkn2|109333|protein kinase N2	AK049713|Pkn2|109333|protein kinase N2	AK133298|Pkn2|109333|protein kinase N2	NM_178654|Pkn2|109333|protein kinase N2
mm9_v1_chrX_+_38754480_38754557	0.13505	UUGGCAA	NM_016886|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC086678|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr7_+_94395160_94395355	0.133409	UUGGCAA	AK169304|Nox4|50490|NADPH oxidase 4	AK087097|Nox4|50490|NADPH oxidase 4	AF261944|Nox4|50490|NADPH oxidase 4	AF276957|Nox4|50490|NADPH oxidase 4	AK050371|Nox4|50490|NADPH oxidase 4	AK085509|Nox4|50490|NADPH oxidase 4	AK149398|Nox4|50490|NADPH oxidase 4	AK149455|Nox4|50490|NADPH oxidase 4	AK149492|Nox4|50490|NADPH oxidase 4	NM_015760|Nox4|50490|NADPH oxidase 4	AK052905|Nox4|50490|NADPH oxidase 4	AB041034|Nox4|50490|NADPH oxidase 4	AB042745|Nox4|50490|NADPH oxidase 4	AF218723|Nox4|50490|NADPH oxidase 4	BC138918|Nox4|50490|NADPH oxidase 4	BC145462|Nox4|50490|NADPH oxidase 4	BC021378|Nox4|50490|NADPH oxidase 4	EU861989|Nox4|50490|NADPH oxidase 4
mm9_v1_chr1_+_153602492_153602592	0.133163	UUGGCAA	AB188342|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	NM_001039644|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	AK141326|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	AK143252|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC138658|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC138659|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC145357|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC145358|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3
mm9_v1_chr9_-_94438499_94438504	0.13153	UUGGCAA	NM_001033145|1190002N15Rik|68861|RIKEN cDNA 1190002N15 gene
mm9_v1_chr8_-_124175827_124175832	0.130204	UUGGCAA	BC132449|Zcchc14|142682|zinc finger, CCHC domain containing 14	BC137853|Zcchc14|142682|zinc finger, CCHC domain containing 14	AB030244|Zcchc14|142682|zinc finger, CCHC domain containing 14	NM_080855|Zcchc14|142682|zinc finger, CCHC domain containing 14
mm9_v1_chr16_+_72663393_72663448	0.12392	UUGGCAA	AK138485|Robo1|19876|roundabout homolog 1 (Drosophila)	AK143001|Robo1|19876|roundabout homolog 1 (Drosophila)	NM_019413|Robo1|19876|roundabout homolog 1 (Drosophila)	AK032752|Robo1|19876|roundabout homolog 1 (Drosophila)	AK142047|Robo1|19876|roundabout homolog 1 (Drosophila)
mm9_v1_chr10_-_70062025_70062087	0.122936	UUGGCAA	AK032166|Phyhipl|70911|phytanoyl-CoA hydroxylase interacting protein-like	AK083011|Phyhipl|70911|phytanoyl-CoA hydroxylase interacting protein-like	NM_178621|Phyhipl|70911|phytanoyl-CoA hydroxylase interacting protein-like
mm9_v1_chr5_+_73305509_73305751	0.121853	UUGGCAA	NM_001113423|Slain2|75991|SLAIN motif family, member 2	NM_153567|Slain2|75991|SLAIN motif family, member 2	AK146432|Slain2|75991|SLAIN motif family, member 2	AK129365|Slain2|75991|SLAIN motif family, member 2	BC010836|Slain2|75991|SLAIN motif family, member 2	AK033137|Slain2|75991|SLAIN motif family, member 2	AK039970|Slain2|75991|SLAIN motif family, member 2	BC076573|Slain2|75991|SLAIN motif family, member 2
mm9_v1_chr9_+_3532302_3532353	0.12063	UUGGCAA	NM_001033322|Gucy1a2|234889|guanylate cyclase 1, soluble, alpha 2
mm9_v1_chr14_+_47502637_47502773	0.120342	UUGGCAA	NM_001037221|Samd4|74480|sterile alpha motif domain containing 4	NM_028966|Samd4|74480|sterile alpha motif domain containing 4	AK134243|Samd4|74480|sterile alpha motif domain containing 4	DQ278487|Samd4|74480|sterile alpha motif domain containing 4	AK133470|Samd4|74480|sterile alpha motif domain containing 4	BC145827|Samd4|74480|sterile alpha motif domain containing 4	BC145829|Samd4|74480|sterile alpha motif domain containing 4
mm9_v1_chr2_-_131970786_131970867	0.120238	UUGGCAA	AY004874|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	AK087175|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	AK169991|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	NM_018824|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2
mm9_v1_chr19_+_4594318_4594387	0.118849	UUGGCAA	NM_008797|Pcx|18563|pyruvate carboxylase	L09192|Pcx|18563|pyruvate carboxylase
mm9_v1_chr3_+_145421621_145421769	0.115957	UUGGCAA	AK143507|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1	AK148907|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1	NM_026993|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1	AK010430|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1	BC034505|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1
mm9_v1_chr18_-_35091570_35091661	0.11471	UUGGCAA	BC013717|Etf1|225363|eukaryotic translation termination factor 1	AK170221|Etf1|225363|eukaryotic translation termination factor 1	AK077559|Etf1|225363|eukaryotic translation termination factor 1	AK049607|Etf1|225363|eukaryotic translation termination factor 1	AK164020|Etf1|225363|eukaryotic translation termination factor 1	AK139933|Etf1|225363|eukaryotic translation termination factor 1	AK166740|Etf1|225363|eukaryotic translation termination factor 1	AK169345|Etf1|225363|eukaryotic translation termination factor 1	NM_144866|Etf1|225363|eukaryotic translation termination factor 1
mm9_v1_chr18_+_37170365_37170627	0.111429	UUGGCAA	AK141960|Pcdha11|12942|protocadherin alpha 11	AK139436|Pcdha11|12942|protocadherin alpha 11	AK043705|Pcdha11|12942|protocadherin alpha 11	BC141349|Pcdha11|12942|protocadherin alpha 11	AY013758|Pcdha11|12942|protocadherin alpha 11	NM_009960|Pcdha11|12942|protocadherin alpha 11	AB008182|Pcdha11|12942|protocadherin alpha 11
mm9_v1_chr7_+_98239230_98239295	0.109003	UUGGCAA	NM_011807|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chrX_+_69208336_69208359	0.107274	UUGGCAA	BC060135|Prrg3|208748|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)	NM_001081135|Prrg3|208748|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
mm9_v1_chr15_+_58247016_58247063	0.107036	UUGGCAA	AK137324|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	NM_145959|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	BC070426|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed
mm9_v1_chr2_+_106533615_106533705	0.105527	UUGGCAA	AK161666|Mpped2|77015|metallophosphoesterase domain containing 2	NM_001143683|Mpped2|77015|metallophosphoesterase domain containing 2	BC020182|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr16_+_35983402_35983472	0.105336	UUGGCAA	AK169464|Kpna1|16646|karyopherin (importin) alpha 1	AK169311|Kpna1|16646|karyopherin (importin) alpha 1	AK169348|Kpna1|16646|karyopherin (importin) alpha 1	AK028307|Kpna1|16646|karyopherin (importin) alpha 1	AK154800|Kpna1|16646|karyopherin (importin) alpha 1	AK028259|Kpna1|16646|karyopherin (importin) alpha 1	NM_008465|Kpna1|16646|karyopherin (importin) alpha 1	U20619|Kpna1|16646|karyopherin (importin) alpha 1	BC006771|Kpna1|16646|karyopherin (importin) alpha 1
mm9_v1_chr4_-_120770603_120770864	0.1049	UUGGCAA	AY029194|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	BC138578|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	BC023740|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	AK170946|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	AJ487544|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	AK083566|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)	NM_172700|Zmpste24|230709|zinc metallopeptidase, STE24 homolog (S. cerevisiae)
mm9_v1_chr15_+_86044834_86044934	0.0996699	UUGGCAA	AK155770|Tbc1d22a|223754|TBC1 domain family, member 22a	AK154602|Tbc1d22a|223754|TBC1 domain family, member 22a	AK154226|Tbc1d22a|223754|TBC1 domain family, member 22a	AK039627|Tbc1d22a|223754|TBC1 domain family, member 22a	AK155459|Tbc1d22a|223754|TBC1 domain family, member 22a	AK146872|Tbc1d22a|223754|TBC1 domain family, member 22a	BC066009|Tbc1d22a|223754|TBC1 domain family, member 22a	NM_145476|Tbc1d22a|223754|TBC1 domain family, member 22a
mm9_v1_chr15_-_12522310_12522310	0.0993536	UUGGCAA	NM_001081064|Pdzd2|68070|PDZ domain containing 2
mm9_v1_chr17_-_36408313_36408377	0.0968723	UUGGCAA	AK220298|Trim39|79263|tripartite motif-containing 39	AK145861|Trim39|79263|tripartite motif-containing 39	AK053507|Trim39|79263|tripartite motif-containing 39	NM_178281|Trim39|79263|tripartite motif-containing 39
mm9_v1_chr8_+_127536825_127536928	0.0959672	UUGGCAA	AF187040|Tsnax|53424|translin-associated factor X	NM_016909|Tsnax|53424|translin-associated factor X	AK159223|Tsnax|53424|translin-associated factor X
mm9_v1_chr11_-_20731016_20731238	0.0951096	UUGGCAA	AK041053|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK167557|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	BC019131|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	NM_173752|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK156350|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr9_+_25060152_25060278	0.0946627	UUGGCAA	NM_009859|Sept7|235072|septin 7	BC058587|Sept7|235072|septin 7	AK141572|Sept7|235072|septin 7	AK147986|Sept7|235072|septin 7	AK088997|Sept7|235072|septin 7	AK144127|Sept7|235072|septin 7	AK220447|Sept7|235072|septin 7
mm9_v1_chr8_+_91220921_91220958	0.0945438	UUGGCAA	NM_001128170|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_001128171|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_173369|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_001128169|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK122389|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK147204|Cyld|74256|cylindromatosis (turban tumor syndrome)
mm9_v1_chr4_+_86520317_86520392	0.094333	UUGGCAA	BC059819|Acer2|230379|alkaline ceramidase 2	NM_139306|Acer2|230379|alkaline ceramidase 2	AK085306|Acer2|230379|alkaline ceramidase 2	AF282864|Acer2|230379|alkaline ceramidase 2	AY312515|Acer2|230379|alkaline ceramidase 2
mm9_v1_chr2_+_158235580_158235588	0.0938737	UUGGCAA	NM_177658|Ralgapb|228850|Ral GTPase activating protein, beta subunit (non-catalytic)
mm9_v1_chr13_-_46060325_46060353	0.0933161	UUGGCAA	BC058178|Atxn1|20238|ataxin 1	AK048268|Atxn1|20238|ataxin 1	NM_009124|Atxn1|20238|ataxin 1	AK169931|Atxn1|20238|ataxin 1
mm9_v1_chr14_+_21167427_21167478	0.093091	UUGGCAA	BC080849|Fam149b|105428|family with sequence similarity 149, member B	NM_001024512|Fam149b|105428|family with sequence similarity 149, member B	AK129252|Fam149b|105428|family with sequence similarity 149, member B
mm9_v1_chr15_+_57526212_57526467	0.0929472	UUGGCAA	NM_199449|Zhx2|387609|zinc fingers and homeoboxes 2	AK157631|Zhx2|387609|zinc fingers and homeoboxes 2	AK031782|Zhx2|387609|zinc fingers and homeoboxes 2	BC059178|Zhx2|387609|zinc fingers and homeoboxes 2
mm9_v1_chr11_-_69648350_69648356	0.0912302	UUGGCAA	AK173159|Nlgn2|216856|neuroligin 2	NM_198862|Nlgn2|216856|neuroligin 2
mm9_v1_chr1_-_57028171_57028177	0.0904527	UUGGCAA	AF319623|Satb2|212712|special AT-rich sequence binding protein 2	NM_139146|Satb2|212712|special AT-rich sequence binding protein 2
mm9_v1_chr15_-_9070066_9070213	0.0879539	UUGGCAA	AF083215|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK204645|Skp2|27401|S-phase kinase-associated protein 2 (p45)	BC003468|Skp2|27401|S-phase kinase-associated protein 2 (p45)	BC092236|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK167677|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK037002|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK044212|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK166034|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK032979|Skp2|27401|S-phase kinase-associated protein 2 (p45)	BC098371|Skp2|27401|S-phase kinase-associated protein 2 (p45)	NM_013787|Skp2|27401|S-phase kinase-associated protein 2 (p45)	NM_145468|Skp2|27401|S-phase kinase-associated protein 2 (p45)
mm9_v1_chr14_+_27457610_27457865	0.0871848	UUGGCAA	AK013892|Arf4|11843|ADP-ribosylation factor 4	AK002302|Arf4|11843|ADP-ribosylation factor 4	AK168793|Arf4|11843|ADP-ribosylation factor 4	NM_007479|Arf4|11843|ADP-ribosylation factor 4	AK081686|Arf4|11843|ADP-ribosylation factor 4	AK153011|Arf4|11843|ADP-ribosylation factor 4	BC115650|Arf4|11843|ADP-ribosylation factor 4	BC115651|Arf4|11843|ADP-ribosylation factor 4	D87901|Arf4|11843|ADP-ribosylation factor 4
mm9_v1_chr15_-_79272478_79272599	0.0857524	UUGGCAA	NM_013767|Csnk1e|27373|casein kinase 1, epsilon
mm9_v1_chrX_-_22942176_22942193	0.0838029	UUGGCAA	AK004677|Klhl13|67455|kelch-like 13 (Drosophila)	NM_026167|Klhl13|67455|kelch-like 13 (Drosophila)	AK045102|Klhl13|67455|kelch-like 13 (Drosophila)	AK051752|Klhl13|67455|kelch-like 13 (Drosophila)
mm9_v1_chr13_+_81022644_81022695	0.0824865	UUGGCAA	AK088288|Arrdc3|105171|arrestin domain containing 3	AK084951|Arrdc3|105171|arrestin domain containing 3	BC054844|Arrdc3|105171|arrestin domain containing 3	NM_001042591|Arrdc3|105171|arrestin domain containing 3	BC044762|Arrdc3|105171|arrestin domain containing 3	BC098474|Arrdc3|105171|arrestin domain containing 3	AK122499|Arrdc3|105171|arrestin domain containing 3
mm9_v1_chr3_+_88489708_88489765	0.0819675	UUGGCAA	NM_028814|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK170490|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK038617|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	BC006621|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK012969|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK173057|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK083018|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK164337|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK020778|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene
mm9_v1_chr10_-_126700387_126700418	0.0762149	UUGGCAA	AK220479|Kif5a|16572|kinesin family member 5A	AK140769|Kif5a|16572|kinesin family member 5A	NM_001039000|Kif5a|16572|kinesin family member 5A	NM_008447|Kif5a|16572|kinesin family member 5A
mm9_v1_chr19_+_42164922_42164992	0.0737731	UUGGCAA	NM_145501|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	AK030725|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC110363|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC089309|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha
mm9_v1_chr6_-_91361356_91361402	0.0726904	UUGGCAA	BC049093|Wnt7a|22421|wingless-related MMTV integration site 7A	BC057586|Wnt7a|22421|wingless-related MMTV integration site 7A	AK004683|Wnt7a|22421|wingless-related MMTV integration site 7A	NM_009527|Wnt7a|22421|wingless-related MMTV integration site 7A
mm9_v1_chr4_-_35173039_35173134	0.071828	UUGGCAA	AK167354|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene	AK014175|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene	AK154817|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene	NM_001081343|3110043O21Rik|73205|RIKEN cDNA 3110043O21 gene
mm9_v1_chr4_+_137150067_137150162	0.0711954	UUGGCAA	AK166158|Usp48|170707|ubiquitin specific peptidase 48	NM_130879|Usp48|170707|ubiquitin specific peptidase 48	AK220190|Usp48|170707|ubiquitin specific peptidase 48	BC021769|Usp48|170707|ubiquitin specific peptidase 48	AK052297|Usp48|170707|ubiquitin specific peptidase 48
mm9_v1_chr11_-_119409041_119409133	0.0701883	UUGGCAA	BC139018|Nptx1|18164|neuronal pentraxin 1	BC139020|Nptx1|18164|neuronal pentraxin 1	BC093479|Nptx1|18164|neuronal pentraxin 1	NM_008730|Nptx1|18164|neuronal pentraxin 1
mm9_v1_chr7_+_36371265_36371319	0.0701214	UUGGCAA	NM_145633|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	NM_178263|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AK085796|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	BC016493|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AK052177|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AY336500|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AK144733|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	BC065093|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)	AK153853|Ankrd27|245886|ankyrin repeat domain 27 (VPS9 domain)
mm9_v1_chr1_+_87690003_87690086	0.069754	UUGGCAA	NM_133781|Cab39|12283|calcium binding protein 39	AK144665|Cab39|12283|calcium binding protein 39
mm9_v1_chr2_-_38781939_38781980	0.067605	UUGGCAA	U14666|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	NM_010264|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	U09563|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1
mm9_v1_chr16_-_20610796_20610837	0.0672311	UUGGCAA	BC031893|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	AK090067|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	AK149510|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	NM_145939|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)
mm9_v1_chrX_+_39855629_39855874	0.0664283	UUGGCAA	AK042476|Sh2d1a|20400|SH2 domain protein 1A	AF072903|Sh2d1a|20400|SH2 domain protein 1A	AK040076|Sh2d1a|20400|SH2 domain protein 1A	NM_011364|Sh2d1a|20400|SH2 domain protein 1A	BC065390|Sh2d1a|20400|SH2 domain protein 1A	AF097632|Sh2d1a|20400|SH2 domain protein 1A	AF097633|Sh2d1a|20400|SH2 domain protein 1A	BC147367|Sh2d1a|20400|SH2 domain protein 1A	BC147368|Sh2d1a|20400|SH2 domain protein 1A
mm9_v1_chr12_+_33063653_33063723	0.0652819	UUGGCAA	NM_001162903|2010109K11Rik|72123|RIKEN cDNA 2010109K11 gene
mm9_v1_chr8_+_26712705_26712790	0.0651053	UUGGCAA	AK170040|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	BC064447|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	NM_001001735|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	AK172238|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
mm9_v1_chr17_+_49754460_49754540	0.064769	UUGGCAA	AK083760|Kif6|319991|kinesin family member 6	NM_177052|Kif6|319991|kinesin family member 6	AK043404|Kif6|319991|kinesin family member 6
mm9_v1_chr15_+_91958558_91958558	0.0646808	UUGGCAA	NM_007727|Cntn1|12805|contactin 1
mm9_v1_chr7_+_26091105_26091184	0.0640728	UUGGCAA	AK081054|Tmem145|330485|transmembrane protein 145	NM_183311|Tmem145|330485|transmembrane protein 145
mm9_v1_chr13_+_73741384_73741748	0.0638011	UUGGCAA	AK032295|Clptm1l|218335|CLPTM1-like	AK048357|Clptm1l|218335|CLPTM1-like	AK156203|Clptm1l|218335|CLPTM1-like	AK165939|Clptm1l|218335|CLPTM1-like	BC026562|Clptm1l|218335|CLPTM1-like	NM_146047|Clptm1l|218335|CLPTM1-like
mm9_v1_chr2_+_109533719_109533771	0.0634214	UUGGCAA	AY057914|Bdnf|12064|brain derived neurotrophic factor	EF125674|Bdnf|12064|brain derived neurotrophic factor	NM_001048142|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr3_-_87734096_87734116	0.0607806	UUGGCAA	NM_153562|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1
mm9_v1_chr9_-_65756482_65756602	0.0583594	UUGGCAA	AF539614|Trip4|56404|thyroid hormone receptor interactor 4	AK016170|Trip4|56404|thyroid hormone receptor interactor 4	AK139423|Trip4|56404|thyroid hormone receptor interactor 4	AK166192|Trip4|56404|thyroid hormone receptor interactor 4	NM_019797|Trip4|56404|thyroid hormone receptor interactor 4
mm9_v1_chr7_-_151656610_151656667	0.0577505	UUGGCAA	U03184|Cttn|13043|cortactin	BC011434|Cttn|13043|cortactin	AK168871|Cttn|13043|cortactin	AK165555|Cttn|13043|cortactin	AK168699|Cttn|13043|cortactin	AK148010|Cttn|13043|cortactin	AK146856|Cttn|13043|cortactin	NM_007803|Cttn|13043|cortactin	AK084249|Cttn|13043|cortactin	AK168945|Cttn|13043|cortactin
mm9_v1_chrX_+_53599573_53599586	0.057022	UUGGCAA	AK142888|Zfp449|78619|zinc finger protein 449	AK036596|Zfp449|78619|zinc finger protein 449	NM_030139|Zfp449|78619|zinc finger protein 449	AK020600|Zfp449|78619|zinc finger protein 449
mm9_v1_chr7_+_130267398_130267398	0.0565706	UUGGCAA	NM_144925|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr6_+_86354212_86354404	0.0560193	UUGGCAA	NM_001164078|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_001164079|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_011585|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK144222|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK088486|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC023813|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC046812|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC027826|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	U55862|Tia1|21841|cytotoxic granule-associated RNA binding protein 1
mm9_v1_chr10_+_68675404_68675423	0.0552897	UUGGCAA	AK034826|Rhobtb1|69288|Rho-related BTB domain containing 1	NM_001081347|Rhobtb1|69288|Rho-related BTB domain containing 1	BC099973|Rhobtb1|69288|Rho-related BTB domain containing 1
mm9_v1_chr11_-_103273956_103274013	0.054767	UUGGCAA	BC053079|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	NM_183034|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK155357|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK157752|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm9_v1_chr19_+_40905768_40905801	0.0540876	UUGGCAA	AK052506|Ccnj|240665|cyclin J	NM_172839|Ccnj|240665|cyclin J	AK157841|Ccnj|240665|cyclin J	BC120921|Ccnj|240665|cyclin J	BC120922|Ccnj|240665|cyclin J	BC117559|Ccnj|240665|cyclin J
mm9_v1_chr14_-_34260323_34260352	0.0534468	UUGGCAA	AK139498|Mapk8|26419|mitogen-activated protein kinase 8	AK032486|Mapk8|26419|mitogen-activated protein kinase 8	AK043102|Mapk8|26419|mitogen-activated protein kinase 8	AK085745|Mapk8|26419|mitogen-activated protein kinase 8	AK030767|Mapk8|26419|mitogen-activated protein kinase 8	NM_016700|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr19_+_32694494_32694583	0.0533423	UUGGCAA	AK128962|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	BC090997|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	NM_011864|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF052453|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF085144|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr5_-_101103051_101103304	0.0516569	UUGGCAA	BC080773|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK009092|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	NM_027978|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)
mm9_v1_chr13_-_54789148_54789168	0.0504564	UUGGCAA	AK147349|Rnf44|105239|ring finger protein 44	NM_001146025|Rnf44|105239|ring finger protein 44	NM_001146026|Rnf44|105239|ring finger protein 44	NM_134064|Rnf44|105239|ring finger protein 44
mm9_v1_chr13_+_31717603_31717684	0.0497979	UUGGCAA	AK132385|Foxf2|14238|forkhead box F2	NM_010225|Foxf2|14238|forkhead box F2
mm9_v1_chr3_-_27609279_27609407	0.0497038	UUGGCAA	AB098596|Fndc3b|72007|fibronectin type III domain containing 3B	AK147346|Fndc3b|72007|fibronectin type III domain containing 3B	AK220297|Fndc3b|72007|fibronectin type III domain containing 3B	NM_173182|Fndc3b|72007|fibronectin type III domain containing 3B	BC067389|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr17_-_63230665_63230665	0.0493117	UUGGCAA	BC040218|Efna5|13640|ephrin A5	NM_010109|Efna5|13640|ephrin A5	NM_207654|Efna5|13640|ephrin A5
mm9_v1_chr12_+_112812710_112812750	0.0492864	UUGGCAA	AK083683|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	NM_021516|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	NM_022801|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	AK166157|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	AK132247|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	BC066071|Mark3|17169|MAP/microtubule affinity-regulating kinase 3
mm9_v1_chr10_+_82321923_82322011	0.0489416	UUGGCAA	AB027565|Txnrd1|50493|thioredoxin reductase 1	AK151927|Txnrd1|50493|thioredoxin reductase 1	NM_001042513|Txnrd1|50493|thioredoxin reductase 1	NM_015762|Txnrd1|50493|thioredoxin reductase 1	AK146125|Txnrd1|50493|thioredoxin reductase 1	AK149625|Txnrd1|50493|thioredoxin reductase 1	AK168356|Txnrd1|50493|thioredoxin reductase 1	AK011902|Txnrd1|50493|thioredoxin reductase 1	AK186760|Txnrd1|50493|thioredoxin reductase 1	AK186897|Txnrd1|50493|thioredoxin reductase 1	AK194169|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr10_+_76495961_76496025	0.0486077	UUGGCAA	AK088803|Slc19a1|20509|solute carrier family 19 (sodium/hydrogen exchanger), member 1	AK079592|Slc19a1|20509|solute carrier family 19 (sodium/hydrogen exchanger), member 1	NM_031196|Slc19a1|20509|solute carrier family 19 (sodium/hydrogen exchanger), member 1	U66103|Slc19a1|20509|solute carrier family 19 (sodium/hydrogen exchanger), member 1	AK085024|Slc19a1|20509|solute carrier family 19 (sodium/hydrogen exchanger), member 1	U32469|Slc19a1|20509|solute carrier family 19 (sodium/hydrogen exchanger), member 1	AK050714|Slc19a1|20509|solute carrier family 19 (sodium/hydrogen exchanger), member 1
mm9_v1_chr13_+_67033746_67033766	0.0479507	UUGGCAA	AK085857|Ptdss1|19210|phosphatidylserine synthase 1	NM_008959|Ptdss1|19210|phosphatidylserine synthase 1
mm9_v1_chr9_+_64233432_64233531	0.0471438	UUGGCAA	NM_001134399|Megf11|214058|multiple EGF-like-domains 11	NM_172522|Megf11|214058|multiple EGF-like-domains 11	AK048840|Megf11|214058|multiple EGF-like-domains 11	AK122555|Megf11|214058|multiple EGF-like-domains 11	AK051642|Megf11|214058|multiple EGF-like-domains 11	BC151157|Megf11|214058|multiple EGF-like-domains 11	BC172024|Megf11|214058|multiple EGF-like-domains 11
mm9_v1_chr12_+_33638809_33638809	0.0464812	UUGGCAA	BC060971|Sypl|19027|synaptophysin-like protein	NM_013635|Sypl|19027|synaptophysin-like protein
mm9_v1_chr5_+_145306751_145306864	0.0462017	UUGGCAA	AK134806|Nptx2|53324|neuronal pentraxin 2	NM_016789|Nptx2|53324|neuronal pentraxin 2	BC026054|Nptx2|53324|neuronal pentraxin 2	AF049124|Nptx2|53324|neuronal pentraxin 2
mm9_v1_chr15_-_93167308_93167408	0.0461381	UUGGCAA	AK148634|Yaf2|67057|YY1 associated factor 2	AB100452|Yaf2|67057|YY1 associated factor 2	AB100453|Yaf2|67057|YY1 associated factor 2	AK005008|Yaf2|67057|YY1 associated factor 2	AK011702|Yaf2|67057|YY1 associated factor 2	NM_024189|Yaf2|67057|YY1 associated factor 2
mm9_v1_chr19_+_16207300_16207320	0.046071	UUGGCAA	AK147393|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide	NM_008139|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide
mm9_v1_chr1_-_54251877_54252011	0.0457415	UUGGCAA	AK042922|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_001001883|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_172655|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AK047602|Hecw2|329152|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm9_v1_chr9_-_82869081_82869124	0.0428144	UUGGCAA	NM_001081216|Phip|83946|pleckstrin homology domain interacting protein	AK032797|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr19_-_44144244_44144286	0.0426932	UUGGCAA	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr11_+_115281434_115281480	0.0407323	UUGGCAA	NM_183285|Kctd2|70382|potassium channel tetramerisation domain containing 2	AK009318|Kctd2|70382|potassium channel tetramerisation domain containing 2	AK046534|Kctd2|70382|potassium channel tetramerisation domain containing 2	BC095988|Kctd2|70382|potassium channel tetramerisation domain containing 2
mm9_v1_chr19_+_17030600_17030608	0.039008	UUGGCAA	AK165582|Prune2|353211|prune homolog 2 (Drosophila)	AK020727|Prune2|353211|prune homolog 2 (Drosophila)	AK039241|Prune2|353211|prune homolog 2 (Drosophila)	AK165913|Prune2|353211|prune homolog 2 (Drosophila)	NM_181348|Prune2|353211|prune homolog 2 (Drosophila)
mm9_v1_chr1_+_60155090_60155124	0.0387725	UUGGCAA	AK044738|Carf|241066|calcium response factor	AK045594|Carf|241066|calcium response factor	AF454947|Carf|241066|calcium response factor	NM_139150|Carf|241066|calcium response factor
mm9_v1_chr14_+_14845004_14845173	0.0386235	UUGGCAA	AK046679|Atxn7|246103|ataxin 7	NM_139227|Atxn7|246103|ataxin 7	BC137846|Atxn7|246103|ataxin 7
mm9_v1_chr16_+_16896561_16896699	0.0382676	UUGGCAA	AK016942|Ppm1f|68606|protein phosphatase 1F (PP2C domain containing)	NM_176833|Ppm1f|68606|protein phosphatase 1F (PP2C domain containing)	AK154192|Ppm1f|68606|protein phosphatase 1F (PP2C domain containing)	AK164964|Ppm1f|68606|protein phosphatase 1F (PP2C domain containing)
mm9_v1_chr1_+_74379182_74379257	0.0381152	UUGGCAA	AB041609|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_019999|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK086034|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK158483|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK041238|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia
mm9_v1_chr11_-_95171521_95171560	0.0380882	UUGGCAA	AK078483|Myst2|217127|MYST histone acetyltransferase 2	AK166915|Myst2|217127|MYST histone acetyltransferase 2	NM_001195003|Myst2|217127|MYST histone acetyltransferase 2	NM_001195004|Myst2|217127|MYST histone acetyltransferase 2	NM_177619|Myst2|217127|MYST histone acetyltransferase 2
mm9_v1_chr6_-_72849854_72850037	0.0376053	UUGGCAA	NM_019715|Kcmf1|74287|potassium channel modulatory factor 1
mm9_v1_chr11_-_102226475_102226594	0.0371141	UUGGCAA	AK172456|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK171662|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK137542|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK171845|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK172395|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK158184|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK157181|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	AK158143|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1	NM_011403|Slc4a1|20533|solute carrier family 4 (anion exchanger), member 1
mm9_v1_chr2_+_27370649_27370751	0.0367989	UUGGCAA	NM_080848|Wdr5|140858|WD repeat domain 5	BC025801|Wdr5|140858|WD repeat domain 5	AK075937|Wdr5|140858|WD repeat domain 5	AK144091|Wdr5|140858|WD repeat domain 5	BC016103|Wdr5|140858|WD repeat domain 5
mm9_v1_chr15_+_91991704_91991862	0.0366743	UUGGCAA	NM_001159647|Cntn1|12805|contactin 1	BC066864|Cntn1|12805|contactin 1
mm9_v1_chr16_+_18498963_18499004	0.0366545	UUGGCAA	NM_023120|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK158210|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK166195|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK173227|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC029862|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC024635|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like
mm9_v1_chr9_-_119846611_119846675	0.0354163	UUGGCAA	AK170627|Gorasp1|74498|golgi reassembly stacking protein 1	AK154986|Gorasp1|74498|golgi reassembly stacking protein 1	BC012251|Gorasp1|74498|golgi reassembly stacking protein 1	NM_028976|Gorasp1|74498|golgi reassembly stacking protein 1
mm9_v1_chr5_+_35621214_35621214	0.0353624	UUGGCAA	NM_007418|Adra2c|11553|adrenergic receptor, alpha 2c
mm9_v1_chr18_+_31919533_31919621	0.0351793	UUGGCAA	BC056948|Ammecr1l|225339|AMME chromosomal region gene 1-like	NM_153515|Ammecr1l|225339|AMME chromosomal region gene 1-like	AK151257|Ammecr1l|225339|AMME chromosomal region gene 1-like
mm9_v1_chr12_-_77923303_77923517	0.035168	UUGGCAA	AB232610|Rab15|104886|RAB15, member RAS oncogene family	AK158637|Rab15|104886|RAB15, member RAS oncogene family	BC013790|Rab15|104886|RAB15, member RAS oncogene family	AK158768|Rab15|104886|RAB15, member RAS oncogene family	BC027769|Rab15|104886|RAB15, member RAS oncogene family	NM_134050|Rab15|104886|RAB15, member RAS oncogene family
mm9_v1_chr14_-_55196138_55196410	0.0338045	UUGGCAA	BC011035|Jub|16475|ajuba	NM_010590|Jub|16475|ajuba	U79776|Jub|16475|ajuba
mm9_v1_chr14_-_104867215_104867215	0.0337067	UUGGCAA	AY706205|Pou4f1|18996|POU domain, class 4, transcription factor 1	NM_011143|Pou4f1|18996|POU domain, class 4, transcription factor 1
mm9_v1_chr18_-_36675458_36675463	0.033651	UUGGCAA	AK164309|Hbegf|15200|heparin-binding EGF-like growth factor	NM_010415|Hbegf|15200|heparin-binding EGF-like growth factor
mm9_v1_chr4_+_106233632_106233688	0.0329976	UUGGCAA	AK129036|Dhcr24|74754|24-dehydrocholesterol reductase	NM_053272|Dhcr24|74754|24-dehydrocholesterol reductase	AK083737|Dhcr24|74754|24-dehydrocholesterol reductase
mm9_v1_chr19_-_7416286_7416363	0.031478	UUGGCAA	BC058556|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	AK172444|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_001080388|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_001080389|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_007928|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr11_-_104411728_104411933	0.0312066	UUGGCAA	AK039377|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK148278|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC023187|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK161471|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC157955|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172100|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172149|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	NM_145436|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)
mm9_v1_chr10_+_82323085_82323203	0.0307446	UUGGCAA	NM_001042514|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr19_-_41338400_41338559	0.0297813	UUGGCAA	AF269151|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK075807|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK220279|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK147380|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK147629|Tm9sf3|107358|transmembrane 9 superfamily member 3	NM_133352|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr16_+_32608981_32609106	0.0295475	UUGGCAA	NM_011638|Tfrc|22042|transferrin receptor	AK048228|Tfrc|22042|transferrin receptor	AK088961|Tfrc|22042|transferrin receptor	BC054522|Tfrc|22042|transferrin receptor
mm9_v1_chr2_-_178149153_178149214	0.029319	UUGGCAA	NM_001085501|Ppp1r3d|228966|protein phosphatase 1, regulatory subunit 3D
mm9_v1_chr4_+_105988790_105988840	0.0287565	UUGGCAA	NM_183225|Usp24|329908|ubiquitin specific peptidase 24	AK045043|Usp24|329908|ubiquitin specific peptidase 24
mm9_v1_chr8_+_81552335_81552485	0.0277085	UUGGCAA	BC094552|Zfp827|622675|zinc finger protein 827	NM_178267|Zfp827|622675|zinc finger protein 827	BC151183|Zfp827|622675|zinc finger protein 827	AK154905|Zfp827|622675|zinc finger protein 827
mm9_v1_chr7_+_53128141_53128380	0.0276557	UUGGCAA	AK078785|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AK013118|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AJ278132|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	NM_133950|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	BC011370|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AY027435|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
mm9_v1_chr16_+_16983461_16983497	0.0270708	UUGGCAA	AK048127|Mapk1|26413|mitogen-activated protein kinase 1	NM_001038663|Mapk1|26413|mitogen-activated protein kinase 1	NM_011949|Mapk1|26413|mitogen-activated protein kinase 1	AK132241|Mapk1|26413|mitogen-activated protein kinase 1	AK148853|Mapk1|26413|mitogen-activated protein kinase 1	AK087925|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr5_+_65928483_65928591	0.0266331	UUGGCAA	AK139564|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_016786|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK048194|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK035371|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK018366|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK160728|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK031055|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK036068|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK162142|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB011081|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC085311|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK166647|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
mm9_v1_chr11_+_72609717_72609729	0.0260699	UUGGCAA	AK158924|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1	NM_001045536|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1
mm9_v1_chr14_+_48283430_48283453	0.0258357	UUGGCAA	NM_008477|Ktn1|16709|kinectin 1	L43326|Ktn1|16709|kinectin 1
mm9_v1_chr15_+_10106992_10106998	0.0253687	UUGGCAA	AK054551|Prlr|19116|prolactin receptor	NM_011169|Prlr|19116|prolactin receptor	AK042147|Prlr|19116|prolactin receptor
mm9_v1_chr3_-_29912113_29912128	0.0243982	UUGGCAA	AK085548|Mecom|14013|MDS1 and EVI1 complex locus	NM_007963|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr1_-_158869401_158869517	0.0242626	UUGGCAA	AK019543|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159966|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr18_+_37089837_37089938	0.0231958	UUGGCAA	BC082326|Pcdha1|116731|protocadherin alpha 1	AY013756|Pcdha1|116731|protocadherin alpha 1	NM_054072|Pcdha1|116731|protocadherin alpha 1
mm9_v1_chrX_+_136335346_136335366	0.020248	UUGGCAA	NM_016675|Cldn2|12738|claudin 2	BC085494|Cldn2|12738|claudin 2
mm9_v1_chr19_-_18706239_18706339	0.0188112	UUGGCAA	AK008123|Ostf1|20409|osteoclast stimulating factor 1	AK008467|Ostf1|20409|osteoclast stimulating factor 1	U58888|Ostf1|20409|osteoclast stimulating factor 1	AK145949|Ostf1|20409|osteoclast stimulating factor 1	AK005525|Ostf1|20409|osteoclast stimulating factor 1	AK150145|Ostf1|20409|osteoclast stimulating factor 1	AK155028|Ostf1|20409|osteoclast stimulating factor 1	AK149175|Ostf1|20409|osteoclast stimulating factor 1	AK002899|Ostf1|20409|osteoclast stimulating factor 1	AK010074|Ostf1|20409|osteoclast stimulating factor 1	NM_017375|Ostf1|20409|osteoclast stimulating factor 1
mm9_v1_chr3_-_126646303_126646303	0.0181425	UUGGCAA	BC043123|Ank2|109676|ankyrin 2, brain	NM_001034168|Ank2|109676|ankyrin 2, brain
mm9_v1_chr4_-_151235861_151235879	0.0149667	UUGGCAA	AK158710|Camta1|100072|calmodulin binding transcription activator 1	NM_001081557|Camta1|100072|calmodulin binding transcription activator 1	NM_001195565|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr11_-_119903061_119903095	0.014731	UUGGCAA	AF011908|Aatk|11302|apoptosis-associated tyrosine kinase	AK155100|Aatk|11302|apoptosis-associated tyrosine kinase	NM_001198787|Aatk|11302|apoptosis-associated tyrosine kinase	AK036705|Aatk|11302|apoptosis-associated tyrosine kinase
mm9_v1_chr2_+_35413977_35414092	0.014698	UUGGCAA	NM_001114125|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	DQ473307|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr16_+_18498805_18498912	0.0138242	UUGGCAA	AK087954|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	NM_001081682|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK016952|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK171253|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AF301595|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like
mm9_v1_chr15_-_79762947_79763095	0.0129854	UUGGCAA	AB221539|Cbx7|52609|chromobox homolog 7	AK045714|Cbx7|52609|chromobox homolog 7	NM_144811|Cbx7|52609|chromobox homolog 7
mm9_v1_chr19_+_46576137_46576194	0.0122426	UUGGCAA	NM_053100|Trim8|93679|tripartite motif-containing 8	AK155303|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr18_+_37164856_37165092	0.0122387	UUGGCAA	BC079625|Pcdha10|12943|protocadherin alpha 10	AY013757|Pcdha10|12943|protocadherin alpha 10	NM_009961|Pcdha10|12943|protocadherin alpha 10	AB008178|Pcdha10|12943|protocadherin alpha 10
mm9_v1_chr8_+_116159485_116159734	0.0120689	UUGGCAA	NM_001048143|Mon1b|270096|MON1 homolog b (yeast)	AK157390|Mon1b|270096|MON1 homolog b (yeast)	NM_173015|Mon1b|270096|MON1 homolog b (yeast)	AK030288|Mon1b|270096|MON1 homolog b (yeast)
mm9_v1_chr3_-_126701367_126701380	0.0106156	UUGGCAA	AK032060|Ank2|109676|ankyrin 2, brain	NM_178655|Ank2|109676|ankyrin 2, brain
mm9_v1_chr11_+_49660238_49660298	0.010433	UUGGCAA	NM_001163671|Mapk9|26420|mitogen-activated protein kinase 9	NM_001163672|Mapk9|26420|mitogen-activated protein kinase 9	NM_016961|Mapk9|26420|mitogen-activated protein kinase 9	NM_207692|Mapk9|26420|mitogen-activated protein kinase 9	AK031959|Mapk9|26420|mitogen-activated protein kinase 9	AK090057|Mapk9|26420|mitogen-activated protein kinase 9	AK145083|Mapk9|26420|mitogen-activated protein kinase 9	BC028341|Mapk9|26420|mitogen-activated protein kinase 9
mm9_v1_chr10_+_126602820_126602972	0.00968247	UUGGCAA	AK040324|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	NM_027739|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	AK086849|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	L25885|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC036996|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr3_+_108087046_108087050	0.00831955	UUGGCAA	BC056343|Sort1|20661|sortilin 1	NM_019972|Sort1|20661|sortilin 1
mm9_v1_chr9_-_49607164_49607185	0.00820063	UUGGCAA	NM_001081445|Ncam1|17967|neural cell adhesion molecule 1	NM_001113204|Ncam1|17967|neural cell adhesion molecule 1	NM_010875|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr11_-_106993235_106993235	0.00757319	UUGGCAA	NM_176850|Bptf|207165|bromodomain PHD finger transcription factor
mm9_v1_chr14_-_70751120_70751274	0.0074358	UUGGCAA	AK158096|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AB177995|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	BC021530|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135151|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_144808|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr19_+_6241665_6241742	0.00655722	UUGGCAA	NM_194348|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)	BC063264|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)	AK129132|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)
mm9_v1_chr3_+_62142698_62142868	0.00614744	UUGGCAA	NM_001081295|Arhgef26|622434|Rho guanine nucleotide exchange factor (GEF) 26
mm9_v1_chr2_+_30219837_30219854	0.00532644	UUGGCAA	BC051404|Fam73b|108958|family with sequence similarity 73, member B	NM_175392|Fam73b|108958|family with sequence similarity 73, member B
mm9_v1_chr11_-_65083442_65083498	0.00477416	UUGGCAA	AF384055|Myocd|214384|myocardin	AY303755|Myocd|214384|myocardin	NM_145136|Myocd|214384|myocardin	NM_146386|Myocd|214384|myocardin	AK142216|Myocd|214384|myocardin
mm9_v1_chr9_+_100544034_100544056	0.0044231	UUGGCAA	AK052003|Stag1|20842|stromal antigen 1	BC062954|Stag1|20842|stromal antigen 1	NM_009282|Stag1|20842|stromal antigen 1	AK017978|Stag1|20842|stromal antigen 1
mm9_v1_chr1_+_36568707_36568722	0.00401864	UUGGCAA	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr12_-_3309887_3309978	0.0036399	UUGGCAA	AK134988|Rab10|19325|RAB10, member RAS oncogene family	AK150791|Rab10|19325|RAB10, member RAS oncogene family	AK153325|Rab10|19325|RAB10, member RAS oncogene family	BC052735|Rab10|19325|RAB10, member RAS oncogene family	BC056374|Rab10|19325|RAB10, member RAS oncogene family	AK160960|Rab10|19325|RAB10, member RAS oncogene family	AK150319|Rab10|19325|RAB10, member RAS oncogene family	AK153315|Rab10|19325|RAB10, member RAS oncogene family	AK159988|Rab10|19325|RAB10, member RAS oncogene family	AK168320|Rab10|19325|RAB10, member RAS oncogene family	AK087964|Rab10|19325|RAB10, member RAS oncogene family	AK159383|Rab10|19325|RAB10, member RAS oncogene family	AK159845|Rab10|19325|RAB10, member RAS oncogene family	AK028320|Rab10|19325|RAB10, member RAS oncogene family	AK166010|Rab10|19325|RAB10, member RAS oncogene family	AK045299|Rab10|19325|RAB10, member RAS oncogene family	AK008725|Rab10|19325|RAB10, member RAS oncogene family	AK146357|Rab10|19325|RAB10, member RAS oncogene family	NM_016676|Rab10|19325|RAB10, member RAS oncogene family
mm9_v1_chr3_+_27837540_27837616	0.00166397	UUGGCAA	NM_001164056|Pld1|18805|phospholipase D1	U87868|Pld1|18805|phospholipase D1
mm9_v1_chr6_-_57641998_57642109	0.0016601	UUGGCAA	AK011515|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	AK029193|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	AK032381|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	AK003713|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	AK008978|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y	NM_025574|Pigy|66459|phosphatidylinositol glycan anchor biosynthesis, class Y
