GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Motif name | Z-value | Associated genes | Profile | Logo |
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YBX1_FOS_NFYC_NFYA_NFYB_CEBPZ | 7.85 |
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NRF1 | 5.80 |
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ELF2_GABPA_ELF5 | 4.88 |
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TAF1 | 4.52 |
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RFX3_RFX2 | 4.51 |
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E2F7_E2F1 | 4.51 |
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MXI1_MYC_MYCN | 4.17 |
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WT1_MTF1_ZBTB7B | 3.94 |
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ZBTB33_CHD2 | 3.93 |
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ID4_TCF4_SNAI2 | 3.88 |
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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.