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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for AAAGUGC

Z-value: 1.59

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miRNA associated with seed AAAGUGC

NamemiRBASE accession
hsa-miR-106a-5p
MIMAT0000103
hsa-miR-106b-5p
MIMAT0000680
hsa-miR-17-5p
MIMAT0000070
hsa-miR-20a-5p
MIMAT0000075
hsa-miR-20b-5p
MIMAT0001413
hsa-miR-519d-3p
MIMAT0002853
hsa-miR-526b-3p
MIMAT0002836
hsa-miR-93-5p
MIMAT0000093

Activity profile of AAAGUGC motif

GNF_1_721_B_lymphoblastsGNF_1_AmygdalaGNF_1_BM-CD34+GNF_1_bronchialepithelialcellsGNF_1_CerebellumPedunclesGNF_1_DRGGNF_1_fetalThyroidGNF_1_kidneyGNF_1_LiverGNF_1_lymphomaburkittsRajiGNF_1_OvaryGNF_1_PB-BDCA4+Dentritic_CellsGNF_1_PB-CD19+BcellsGNF_1_PonsGNF_1_SkeletalMuscleGNF_1_subthalamicnucleusGNF_1_TestisGermCellGNF_1_ThalamusGNF_1_TonsilGNF_1_UterusCorpusGNF_2_ADIPOCYTEGNF_2_AppendixGNF_2_BM-CD71+EarlyErythroidGNF_2_CardiacMyocytesGNF_2_ciliaryganglionGNF_2_fetalbrainGNF_2_globuspallidusGNF_2_leukemiachronicmyelogenous(k562)GNF_2_LungGNF_2_MedullaOblongataGNF_2_PancreasGNF_2_PB-CD4+TcellsGNF_2_PB-CD56+NKCellsGNF_2_PrefrontalCortexGNF_2_skinGNF_2_SuperiorCervicalGanglionGNF_2_TestisInterstitialGNF_2_thymusGNF_2_tracheaGNF_2_WHOLEBLOODNCI60_1_A549_ATCCNCI60_1_CCRF-CEMNCI60_1_HCC-2998NCI60_1_HOP-92NCI60_1_IGROV1_rep1NCI60_1_LOXIMVINCI60_1_MDA-MB-435NCI60_1_NCI-ADR-RESNCI60_1_NCI-H522NCI60_1_OVCAR-3NCI60_1_SF-539NCI60_1_SK-MEL-5NCI60_1_SNB-75NCI60_1_T47DNCI60_1_UACC-62−0.3−0.2−0.100.10.2

Sorted Z-values of AAAGUGC motif

−4−3−2−10123NCI60_1_K-562NCI60_1_IGROV1_rep2NCI60_1_NCI-ADR-RESNCI60_1_PC-3GNF_1_721_B_lymphoblastsNCI60_1_MDA-MB-231_ATCCNCI60_1_OVCAR-4NCI60_1_UACC-62GNF_2_leukemialymphoblastic(molt4)GNF_1_BM-CD34+GNF_1_BM-CD105+EndothelialNCI60_1_RXF-393GNF_2_lymphomaburkittsDaudiGNF_2_bronchialepithelialcellsNCI60_1_SF-268GNF_2_lymphomaburkittsRajiNCI60_1_SNB-75GNF_2_PLACENTAGNF_1_BM-CD71+EarlyErythroidNCI60_1_SK-MEL-28GNF_2_PB-CD14+MonocytesGNF_2_LungGNF_1_PB-CD19+BcellsGNF_1_fetalThyroidGNF_2_PB-BDCA4+Dentritic_CellsGNF_1_PB-BDCA4+Dentritic_CellsGNF_2_ThyroidGNF_1_DRGGNF_1_testisGNF_1_kidneyGNF_1_TrigeminalGanglionGNF_1_atrioventricularnodeGNF_1_WHOLEBLOODGNF_2_atrioventricularnodeGNF_1_WholeBrainGNF_1_PituitaryGNF_1_ThalamusGNF_2_SuperiorCervicalGanglionGNF_2_PonsGNF_1_OccipitalLobeGNF_2_ParietalLobeGNF_2_caudatenucleusGNF_1_subthalamicnucleusGNF_1_cerebellum

Network of associatons between targets according to the STRING database.

First level regulatory network of AAAGUGC

PNG image of the network

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