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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
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Results for AGAUCAG
Z-value: 0.03
Motif logo
miRNA associated with seed AGAUCAG
Name
miRBASE accession
hsa-miR-383-5p.2
Links
miRBase
Activity profile of AGAUCAG motif
GNF_1_721_B_lymphoblasts
GNF_1_Amygdala
GNF_1_BM-CD34+
GNF_1_bronchialepithelialcells
GNF_1_CerebellumPeduncles
GNF_1_DRG
GNF_1_fetalThyroid
GNF_1_kidney
GNF_1_Liver
GNF_1_lymphomaburkittsRaji
GNF_1_Ovary
GNF_1_PB-BDCA4+Dentritic_Cells
GNF_1_PB-CD19+Bcells
GNF_1_Pons
GNF_1_SkeletalMuscle
GNF_1_subthalamicnucleus
GNF_1_TestisGermCell
GNF_1_Thalamus
GNF_1_Tonsil
GNF_1_UterusCorpus
GNF_2_ADIPOCYTE
GNF_2_Appendix
GNF_2_BM-CD71+EarlyErythroid
GNF_2_CardiacMyocytes
GNF_2_ciliaryganglion
GNF_2_fetalbrain
GNF_2_globuspallidus
GNF_2_leukemiachronicmyelogenous(k562)
GNF_2_Lung
GNF_2_MedullaOblongata
GNF_2_Pancreas
GNF_2_PB-CD4+Tcells
GNF_2_PB-CD56+NKCells
GNF_2_PrefrontalCortex
GNF_2_skin
GNF_2_SuperiorCervicalGanglion
GNF_2_TestisInterstitial
GNF_2_thymus
GNF_2_trachea
GNF_2_WHOLEBLOOD
NCI60_1_A549_ATCC
NCI60_1_CCRF-CEM
NCI60_1_HCC-2998
NCI60_1_HOP-92
NCI60_1_IGROV1_rep1
NCI60_1_LOXIMVI
NCI60_1_MDA-MB-435
NCI60_1_NCI-ADR-RES
NCI60_1_NCI-H522
NCI60_1_OVCAR-3
NCI60_1_SF-539
NCI60_1_SK-MEL-5
NCI60_1_SNB-75
NCI60_1_T47D
NCI60_1_UACC-62
−0.05
0
0.05
plotly-logomark
Sorted Z-values of AGAUCAG motif
−0.08
−0.06
−0.04
−0.02
0
0.02
0.04
0.06
0.08
NCI60_1_UACC-257
NCI60_1_SK-MEL-5
NCI60_1_CAKI-1
NCI60_1_MALME-3M
GNF_2_BM-CD33+Myeloid
NCI60_1_NCI-ADR-RES
GNF_1_ADIPOCYTE
GNF_1_PB-CD56+NKCells
NCI60_1_SK-MEL-2
GNF_1_Lung
NCI60_1_IGROV1_rep2
GNF_2_PB-CD14+Monocytes
NCI60_1_SR
GNF_1_PB-CD8+Tcells
GNF_2_Prostate
NCI60_1_SF-268
GNF_2_fetallung
GNF_2_Lung
GNF_1_PrefrontalCortex
GNF_1_thymus
NCI60_1_SK-OV-3
GNF_2_SmoothMuscle
GNF_2_PrefrontalCortex
GNF_1_Hypothalamus
NCI60_1_UO-31
NCI60_1_EKVX
GNF_1_SmoothMuscle
GNF_2_Tonsil
GNF_1_SuperiorCervicalGanglion
GNF_2_TestisGermCell
NCI60_1_786-0
GNF_1_Appendix
GNF_2_globuspallidus
GNF_2_MedullaOblongata
GNF_1_Thalamus
GNF_1_trachea
GNF_2_SuperiorCervicalGanglion
GNF_1_AdrenalCortex
GNF_2_TONGUE
GNF_1_CerebellumPeduncles
GNF_1_BM-CD71+EarlyErythroid
NCI60_1_SW-620
GNF_1_leukemiachronicmyelogenous(k562)
NCI60_1_CCRF-CEM
plotly-logomark
Network of associatons between targets according to the
STRING database.
First level regulatory network of AGAUCAG
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Top targets:
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entries
Promoter
Score
Transcript
Gene
Gene Info
chr7_-_44885446
Show fit
0.08
ENST00000395699.5
PURB
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
purine rich element binding protein B
chr5_-_14871757
Show fit
0.04
ENST00000284268.8
ANKH
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
ANKH inorganic pyrophosphate transport regulator
chr15_-_50765656
Show fit
0.04
ENST00000261854.10
SPPL2A
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
signal peptide peptidase like 2A
chr15_+_41660397
Show fit
0.04
ENST00000219905.12
ENST00000566586.6
MGA
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
MAX dimerization protein MGA
chr22_+_21417357
Show fit
0.03
ENST00000407464.7
HIC2
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
HIC ZBTB transcriptional repressor 2
chr7_-_84194781
Show fit
0.02
ENST00000265362.9
SEMA3A
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
semaphorin 3A
chr20_+_6767678
Show fit
0.02
ENST00000378827.5
BMP2
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
bone morphogenetic protein 2
chr6_-_33009568
Show fit
0.02
ENST00000374813.1
ENST00000229829.7
HLA-DOA
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
major histocompatibility complex, class II, DO alpha
chr18_+_22169580
Show fit
0.02
ENST00000269216.10
GATA6
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
GATA binding protein 6
chr4_-_98929092
Show fit
0.02
ENST00000280892.10
ENST00000511644.5
ENST00000504432.5
ENST00000450253.7
ENST00000505992.1
EIF4E
Links
Ensembl
NCBI
GeneCards
UniProt
Show fit
eukaryotic translation initiation factor 4E
Showing 1 to 10 of 17 entries
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Gene Ontology Analysis