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GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for AGAUCAG

Z-value: 0.03

Motif logo

miRNA associated with seed AGAUCAG

NamemiRBASE accession

Activity profile of AGAUCAG motif

GNF_1_721_B_lymphoblastsGNF_1_AmygdalaGNF_1_BM-CD34+GNF_1_bronchialepithelialcellsGNF_1_CerebellumPedunclesGNF_1_DRGGNF_1_fetalThyroidGNF_1_kidneyGNF_1_LiverGNF_1_lymphomaburkittsRajiGNF_1_OvaryGNF_1_PB-BDCA4+Dentritic_CellsGNF_1_PB-CD19+BcellsGNF_1_PonsGNF_1_SkeletalMuscleGNF_1_subthalamicnucleusGNF_1_TestisGermCellGNF_1_ThalamusGNF_1_TonsilGNF_1_UterusCorpusGNF_2_ADIPOCYTEGNF_2_AppendixGNF_2_BM-CD71+EarlyErythroidGNF_2_CardiacMyocytesGNF_2_ciliaryganglionGNF_2_fetalbrainGNF_2_globuspallidusGNF_2_leukemiachronicmyelogenous(k562)GNF_2_LungGNF_2_MedullaOblongataGNF_2_PancreasGNF_2_PB-CD4+TcellsGNF_2_PB-CD56+NKCellsGNF_2_PrefrontalCortexGNF_2_skinGNF_2_SuperiorCervicalGanglionGNF_2_TestisInterstitialGNF_2_thymusGNF_2_tracheaGNF_2_WHOLEBLOODNCI60_1_A549_ATCCNCI60_1_CCRF-CEMNCI60_1_HCC-2998NCI60_1_HOP-92NCI60_1_IGROV1_rep1NCI60_1_LOXIMVINCI60_1_MDA-MB-435NCI60_1_NCI-ADR-RESNCI60_1_NCI-H522NCI60_1_OVCAR-3NCI60_1_SF-539NCI60_1_SK-MEL-5NCI60_1_SNB-75NCI60_1_T47DNCI60_1_UACC-62−0.0500.05

Sorted Z-values of AGAUCAG motif

−0.08−0.06−0.04−0.0200.020.040.060.08NCI60_1_UACC-257NCI60_1_SK-MEL-5NCI60_1_CAKI-1NCI60_1_MALME-3MGNF_2_BM-CD33+MyeloidNCI60_1_NCI-ADR-RESGNF_1_ADIPOCYTEGNF_1_PB-CD56+NKCellsNCI60_1_SK-MEL-2GNF_1_LungNCI60_1_IGROV1_rep2GNF_2_PB-CD14+MonocytesNCI60_1_SRGNF_1_PB-CD8+TcellsGNF_2_ProstateNCI60_1_SF-268GNF_2_fetallungGNF_2_LungGNF_1_PrefrontalCortexGNF_1_thymusNCI60_1_SK-OV-3GNF_2_SmoothMuscleGNF_2_PrefrontalCortexGNF_1_HypothalamusNCI60_1_UO-31NCI60_1_EKVXGNF_1_SmoothMuscleGNF_2_TonsilGNF_1_SuperiorCervicalGanglionGNF_2_TestisGermCellNCI60_1_786-0GNF_1_AppendixGNF_2_globuspallidusGNF_2_MedullaOblongataGNF_1_ThalamusGNF_1_tracheaGNF_2_SuperiorCervicalGanglionGNF_1_AdrenalCortexGNF_2_TONGUEGNF_1_CerebellumPedunclesGNF_1_BM-CD71+EarlyErythroidNCI60_1_SW-620GNF_1_leukemiachronicmyelogenous(k562)NCI60_1_CCRF-CEM

Network of associatons between targets according to the STRING database.

First level regulatory network of AGAUCAG

PNG image of the network

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Gene Ontology Analysis