Project

GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

Navigation
Downloads

Results for AUGGCAC

Z-value: 0.92

Motif logo

miRNA associated with seed AUGGCAC

NamemiRBASE accession
MIMAT0000261

Activity profile of AUGGCAC motif

GNF_1_721_B_lymphoblastsGNF_1_AmygdalaGNF_1_BM-CD34+GNF_1_bronchialepithelialcellsGNF_1_CerebellumPedunclesGNF_1_DRGGNF_1_fetalThyroidGNF_1_kidneyGNF_1_LiverGNF_1_lymphomaburkittsRajiGNF_1_OvaryGNF_1_PB-BDCA4+Dentritic_CellsGNF_1_PB-CD19+BcellsGNF_1_PonsGNF_1_SkeletalMuscleGNF_1_subthalamicnucleusGNF_1_TestisGermCellGNF_1_ThalamusGNF_1_TonsilGNF_1_UterusCorpusGNF_2_ADIPOCYTEGNF_2_AppendixGNF_2_BM-CD71+EarlyErythroidGNF_2_CardiacMyocytesGNF_2_ciliaryganglionGNF_2_fetalbrainGNF_2_globuspallidusGNF_2_leukemiachronicmyelogenous(k562)GNF_2_LungGNF_2_MedullaOblongataGNF_2_PancreasGNF_2_PB-CD4+TcellsGNF_2_PB-CD56+NKCellsGNF_2_PrefrontalCortexGNF_2_skinGNF_2_SuperiorCervicalGanglionGNF_2_TestisInterstitialGNF_2_thymusGNF_2_tracheaGNF_2_WHOLEBLOODNCI60_1_A549_ATCCNCI60_1_CCRF-CEMNCI60_1_HCC-2998NCI60_1_HOP-92NCI60_1_IGROV1_rep1NCI60_1_LOXIMVINCI60_1_MDA-MB-435NCI60_1_NCI-ADR-RESNCI60_1_NCI-H522NCI60_1_OVCAR-3NCI60_1_SF-539NCI60_1_SK-MEL-5NCI60_1_SNB-75NCI60_1_T47DNCI60_1_UACC-62−0.100.1

Sorted Z-values of AUGGCAC motif

−1.5−1−0.500.511.52GNF_2_AdrenalCortexGNF_2_HeartGNF_1_kidneyGNF_2_adrenalglandGNF_1_LiverGNF_2_TestisSeminiferousTubuleGNF_2_OvaryGNF_1_CingulateCortexGNF_1_atrioventricularnodeGNF_2_SuperiorCervicalGanglionGNF_2_TONGUEGNF_1_TestisGermCellGNF_2_ParietalLobeGNF_2_skinGNF_1_subthalamicnucleusGNF_2_OlfactoryBulbGNF_1_TonsilGNF_2_PancreaticIsletsGNF_2_PLACENTAGNF_2_subthalamicnucleusGNF_1_PLACENTAGNF_1_leukemiachronicmyelogenous(k562)GNF_2_leukemiachronicmyelogenous(k562)GNF_1_SmoothMuscleGNF_2_SmoothMuscleNCI60_1_CAKI-1GNF_1_OccipitalLobeNCI60_1_A498GNF_2_UterusGNF_1_ThyroidGNF_1_bronchialepithelialcellsGNF_2_BM-CD34+NCI60_1_M14GNF_1_leukemiapromyelocytic(hl60)NCI60_1_HT29GNF_2_PB-CD8+TcellsNCI60_1_IGROV1_rep1NCI60_1_MALME-3MNCI60_1_COLO205NCI60_1_MDA-MB-435NCI60_1_NCI-H322MNCI60_1_K-562NCI60_1_SF-295NCI60_1_SF-268

Network of associatons between targets according to the STRING database.

First level regulatory network of AUGGCAC

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: