GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_24914942 Show fit | 20.28 |
ENST00000433454.3
|
neurofilament medium |
|
chr16_+_58463663 Show fit | 16.34 |
ENST00000258187.9
|
NDRG family member 4 |
|
chr15_+_91100194 Show fit | 13.13 |
ENST00000394232.6
|
synaptic vesicle glycoprotein 2B |
|
chr12_+_78864768 Show fit | 12.99 |
ENST00000261205.9
ENST00000457153.6 |
synaptotagmin 1 |
|
chr5_-_137499293 Show fit | 12.22 |
ENST00000510689.5
ENST00000394945.6 |
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 |
|
chr3_+_49554436 Show fit | 10.65 |
ENST00000296452.5
|
bassoon presynaptic cytomatrix protein |
|
chr9_-_90642791 Show fit | 10.33 |
ENST00000375765.5
ENST00000636786.1 |
DIRAS family GTPase 2 |
|
chr16_+_1612337 Show fit | 9.53 |
ENST00000674071.1
ENST00000397412.8 |
cramped chromatin regulator homolog 1 |
|
chr10_-_79445617 Show fit | 9.37 |
ENST00000372336.4
|
zinc finger CCHC-type containing 24 |
|
chr19_+_18153155 Show fit | 9.33 |
ENST00000222254.13
|
phosphoinositide-3-kinase regulatory subunit 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
5.1 | 20.3 | GO:0033693 | neurofilament bundle assembly(GO:0033693) |
1.2 | 16.3 | GO:2001135 | regulation of endocytic recycling(GO:2001135) |
0.3 | 15.1 | GO:0006198 | cAMP catabolic process(GO:0006198) |
4.3 | 13.0 | GO:0098746 | fast, calcium ion-dependent exocytosis of neurotransmitter(GO:0098746) |
0.1 | 11.8 | GO:0010812 | negative regulation of cell-substrate adhesion(GO:0010812) |
0.4 | 10.8 | GO:0032012 | regulation of ARF protein signal transduction(GO:0032012) |
3.6 | 10.7 | GO:0099526 | presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526) |
0.0 | 10.7 | GO:0006836 | neurotransmitter transport(GO:0006836) |
0.3 | 10.5 | GO:2001275 | positive regulation of glucose import in response to insulin stimulus(GO:2001275) |
0.2 | 8.9 | GO:0050435 | beta-amyloid metabolic process(GO:0050435) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 22.9 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
1.4 | 20.3 | GO:0097418 | neurofibrillary tangle(GO:0097418) |
0.9 | 17.2 | GO:0033270 | paranode region of axon(GO:0033270) |
0.4 | 17.0 | GO:0033268 | node of Ranvier(GO:0033268) |
0.2 | 15.0 | GO:0030672 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
0.4 | 14.4 | GO:1902711 | GABA-A receptor complex(GO:1902711) |
0.1 | 13.9 | GO:0045211 | postsynaptic membrane(GO:0045211) |
2.6 | 13.0 | GO:0060201 | clathrin-sculpted acetylcholine transport vesicle(GO:0060200) clathrin-sculpted acetylcholine transport vesicle membrane(GO:0060201) |
3.6 | 10.7 | GO:0099569 | cytoskeleton of presynaptic active zone(GO:0048788) presynaptic active zone cytoplasmic component(GO:0098831) presynaptic cytoskeleton(GO:0099569) |
0.3 | 9.1 | GO:0005942 | phosphatidylinositol 3-kinase complex(GO:0005942) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 23.1 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.6 | 15.8 | GO:0050998 | nitric-oxide synthase binding(GO:0050998) |
0.5 | 15.8 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.3 | 15.1 | GO:0004115 | 3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115) |
0.6 | 13.6 | GO:0008191 | metalloendopeptidase inhibitor activity(GO:0008191) |
2.6 | 13.0 | GO:0030348 | syntaxin-3 binding(GO:0030348) |
0.6 | 12.2 | GO:0050811 | GABA receptor binding(GO:0050811) |
0.0 | 11.6 | GO:0005525 | GTP binding(GO:0005525) |
0.4 | 11.2 | GO:0005086 | ARF guanyl-nucleotide exchange factor activity(GO:0005086) |
1.2 | 10.5 | GO:0046935 | 1-phosphatidylinositol-3-kinase regulator activity(GO:0046935) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 16.5 | SIG CD40PATHWAYMAP | Genes related to CD40 signaling |
0.2 | 12.3 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.3 | 10.5 | PID TRAIL PATHWAY | TRAIL signaling pathway |
0.3 | 7.0 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.2 | 5.0 | ST TUMOR NECROSIS FACTOR PATHWAY | Tumor Necrosis Factor Pathway. |
0.0 | 4.6 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.1 | 4.4 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.1 | 4.1 | PID IFNG PATHWAY | IFN-gamma pathway |
0.1 | 3.8 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
0.1 | 3.1 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 20.6 | REACTOME ACETYLCHOLINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Acetylcholine Neurotransmitter Release Cycle |
0.4 | 14.4 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.1 | 12.8 | REACTOME G ALPHA S SIGNALLING EVENTS | Genes involved in G alpha (s) signalling events |
0.3 | 12.5 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.5 | 10.5 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.4 | 8.5 | REACTOME G BETA GAMMA SIGNALLING THROUGH PLC BETA | Genes involved in G beta:gamma signalling through PLC beta |
0.2 | 8.1 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.4 | 6.6 | REACTOME PURINE CATABOLISM | Genes involved in Purine catabolism |
0.0 | 6.4 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 4.8 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |